##maf version=1 scoring=roast.v3.3 a score=511.000000 s hg38.chr20_KI270870v1_alt 0 8 + 183433 GATAGCGG s macFas5.chr10 96313860 8 + 96509753 GATAATGG i macFas5.chr10 N 0 C 0 a score=157.000000 s hg38.chr20_KI270870v1_alt 8 12 + 183433 GGAGATAGCAT-------------C s macFas5.chr10 96313868 25 + 96509753 GGGGATAGCATAAGGCAGATAGTgt i macFas5.chr10 C 0 C 0 s otoGar3.GL873542 22754782 12 + 22939663 GGGGACAGCATG------------- i otoGar3.GL873542 N 0 C 0 a score=5773.000000 s hg38.chr20_KI270870v1_alt 20 16 + 183433 GGGGGGATAGTGTGGG s rheMac8.chr10 92653337 16 - 92844088 GGGGGGGTAGTGAGGG i rheMac8.chr10 N 0 C 0 s macFas5.chr10 96313893 16 + 96509753 gagggggtagtgaggg i macFas5.chr10 C 0 C 0 s otoGar3.GL873542 22754794 16 + 22939663 GGGGGGACATTGATGA i otoGar3.GL873542 C 0 C 0 a score=1796.000000 s hg38.chr20_KI270870v1_alt 36 5 + 183433 GGATA s nomLeu3.chr13 109928755 5 - 110113093 GGACA i nomLeu3.chr13 N 0 C 0 s rheMac8.chr10 92653353 5 - 92844088 GGATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96313909 5 + 96509753 ggata i macFas5.chr10 C 0 C 0 s otoGar3.GL873542 22754810 3 + 22939663 GGA-- i otoGar3.GL873542 C 0 C 0 a score=15342.000000 s hg38.chr20_KI270870v1_alt 41 21 + 183433 GTGGGGGGATAGTGTGGGGGA s panTro5.chr20 66301046 21 + 66533130 GTGGGGGGATAGTGTGGGGGA i panTro5.chr20 N 0 I 329 s nomLeu3.chr13 109928760 20 - 110113093 GTAGGGGGATAGT-CGGGGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653358 21 - 92844088 GTGGGGGGATAGCATGAGGCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96313914 21 + 96509753 gtggggggatagcatgaggcg i macFas5.chr10 C 0 C 0 s otoGar3.GL873542 22754813 15 + 22939663 ------GGACAGTGTCAGGGG i otoGar3.GL873542 C 0 C 0 a score=1654.000000 s hg38.chr20_KI270870v1_alt 62 14 + 183433 GATGGTGTGGGGGG s nomLeu3.chr13 109928780 5 - 110113093 GCCAA--------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653379 14 - 92844088 GATAGTGTGGGGGG i rheMac8.chr10 C 0 I 256 s macFas5.chr10 96313935 14 + 96509753 gatagtgtgggggg i macFas5.chr10 C 0 I 6 s otoGar3.GL873542 22754828 13 + 22939663 AATAGATTGGGGG- i otoGar3.GL873542 C 0 C 0 e panTro5.chr20 66301067 329 + 66533130 I a score=-2817.000000 s hg38.chr20_KI270870v1_alt 76 38 + 183433 -------AGATGG--TGTG-GGGGGATAGCGTGGGGGAGATCGTCTAG s nomLeu3.chr13 109928785 11 - 110113093 ---------------------GGGGATAGC----------------AG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96313955 40 + 96509753 -------agggggatagtg-gggggatagcatgaggcggatagtgtcg i macFas5.chr10 I 6 I 12 s otoGar3.GL873542 22754841 34 + 22939663 ACATGATAGGGGAACATTGAGGGGGACAGTATGA-------------- i otoGar3.GL873542 C 0 C 0 e panTro5.chr20 66301067 329 + 66533130 I e rheMac8.chr10 92653393 256 - 92844088 I a score=17316.000000 s hg38.chr20_KI270870v1_alt 114 36 + 183433 GGGGATAGCGTGGG------GGAGATGGTGTGGGGTGGATAG s panTro5.chr20 66301396 37 + 66533130 GGGGATAGTGTGGG-----TGGAGATGGTGTGGGGTGGATAG i panTro5.chr20 I 329 C 0 s nomLeu3.chr13 109928796 36 - 110113093 GGGAATAGCGTGGG------GGAGATGGTGTGGGGGGGATAG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96314007 39 + 96509753 ggggatagtggggggatagcggggatagt---ggggggatag i macFas5.chr10 I 12 C 0 s otoGar3.GL873542 22754875 35 + 22939663 GGGGACAGCATAGG-------GGAACAGTACGGAGAGGACAG i otoGar3.GL873542 C 0 C 0 e rheMac8.chr10 92653393 256 - 92844088 I a score=2903.000000 s hg38.chr20_KI270870v1_alt 150 9 + 183433 TGTGGG--GG--A s panTro5.chr20 66301433 10 + 66533130 TGTGGG-CGG--A i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928832 11 - 110113093 TGTGGG--GGGCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96314046 11 + 96509753 catgaggcgg--a i macFas5.chr10 C 0 C 0 s aotNan1.NW_018500483v1 2587166 9 + 11732439 TGTGGG--GG--A i aotNan1.NW_018500483v1 N 0 C 0 s otoGar3.GL873542 22754910 9 + 22939663 TATTGG--GG--G i otoGar3.GL873542 C 0 C 0 e rheMac8.chr10 92653393 256 - 92844088 I a score=2774.000000 s hg38.chr20_KI270870v1_alt 159 16 + 183433 ---TAGTT--GGG-GGGAGCTG s panTro5.chr20 66301443 17 + 66533130 ---TAGTT--GGGCGGGAGCTG i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928843 15 - 110113093 ---TAG-T--GGG-GGGACCCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96314057 16 + 96509753 ---tagtg--tcg-gggagtag i macFas5.chr10 C 0 I 3 s calJac3.chr5 58116792 18 + 159171411 ---TGGTTGAGGG-GGCAGTGC i calJac3.chr5 N 0 I 2 s aotNan1.NW_018500483v1 2587175 16 + 11732439 ---CAGCT--GGG-GGCAGCCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22754919 19 + 22939663 AACAGGTT--GGC-AGGGGCTG i otoGar3.GL873542 C 0 I 4 e rheMac8.chr10 92653393 256 - 92844088 I a score=45269.000000 s hg38.chr20_KI270870v1_alt 175 23 + 183433 GGGGGATAGTG-GGGGG---------ATAGCAT s panTro5.chr20 66301460 22 + 66533130 GGGGGATAGTG-GGGAG---------AT-GCAT i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928858 23 - 110113093 GGGATATAGCA-GGTGG---------ATAGCAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653649 23 - 92844088 GGGGGATAGTG-GGGGG---------ATAGCAT i rheMac8.chr10 I 256 C 0 s macFas5.chr10 96314076 23 + 96509753 gggggatagtg-ggggg---------atagcat i macFas5.chr10 I 3 C 0 s calJac3.chr5 58116812 32 + 159171411 GGGGCATTGTG-GGGAGCAGTGTGAAAAAGCAG i calJac3.chr5 I 2 C 0 s cebCap1.NW_016107870v1 1047666 23 + 1231380 GGGGGATAGTG-GGGGG---------ATAGCAT i cebCap1.NW_016107870v1 N 0 I 130 s aotNan1.NW_018500483v1 2587191 23 + 11732439 GGGGCATAGTG-GGGGG---------ATAGCAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22754942 24 + 22939663 GGGGGACATTGAAGAGG---------ATAACAT i otoGar3.GL873542 I 4 C 0 a score=15491.000000 s hg38.chr20_KI270870v1_alt 198 13 + 183433 CG-GGGGGATAGTG s panTro5.chr20 66301482 13 + 66533130 CG-GGGGGATAGTG i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928881 13 - 110113093 GG-GGGAGATCGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653672 13 - 92844088 GA-GGCGGATAGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314099 13 + 96509753 ga-ggcggatagtg i macFas5.chr10 C 0 C 0 s calJac3.chr5 58116844 14 + 159171411 TGCCAGGGATAGTG i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2587214 11 + 11732439 ---GGGGGATAGTG i aotNan1.NW_018500483v1 C 0 I 201 s otoGar3.GL873542 22754966 12 + 22939663 -G-Aggggacagtg i otoGar3.GL873542 C 0 C 0 e cebCap1.NW_016107870v1 1047689 130 + 1231380 I a score=31671.000000 s hg38.chr20_KI270870v1_alt 211 72 + 183433 TGG--GGGGGATAGTGTGGGGGATAGTGGGGGGATAGTGTGGGGGAGA-------------TGGTGTTGGGGGAGATGGTGTGGGGT s panTro5.chr20 66301495 85 + 66533130 TGGGCGAgggatactgtgggggatagt-gggggatagtgtgggggaGAAGGTGTGGGAGAGTGGTGTCGGGGGAGATGGTGT-GGGT i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928894 59 - 110113093 TGG---------------GGGGATAGTGGGAGGATAGCGTGGGGGAGA-------------CGGTGTGGGGGGAGATGGTGTGGGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653685 67 - 92844088 TGA---GGGGGTAGTGAGGGGGATAGTGGGGGGATAGCATGAGGCGGA-------------TAGTGT--GGGGGGGTAGTGaggg-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314112 68 + 96509753 tga---gggggtagtgagggggatagtggggggatagcatgaggcgga-------------tagtgt--gggggggtagtgagggg- i macFas5.chr10 C 0 C 0 s calJac3.chr5 58116858 53 + 159171411 ---TTGGGAGATAGTGTGAGGGATAGTGGGGGGGCAGCCGGGGGCA---------------TAGTGT--GGGG-------------- i calJac3.chr5 C 0 C 0 s otoGar3.GL873542 22754978 52 + 22939663 ----ttggggacagtgtgg---------agaggacagtgttggggGAA-------------CAGAAT--GGGGGTAGGGT------- i otoGar3.GL873542 C 0 C 0 e cebCap1.NW_016107870v1 1047689 130 + 1231380 I e aotNan1.NW_018500483v1 2587225 201 + 11732439 I a score=7940.000000 s hg38.chr20_KI270870v1_alt 283 8 + 183433 GGATAGTC s panTro5.chr20 66301580 8 + 66533130 GGATAGTC i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928953 8 - 110113093 GGATAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653752 8 - 92844088 ggatagtg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314180 7 + 96509753 -gatagtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785679 8 - 16982598 ggatagtg i macNem1.NW_012014244v1 N 0 C 0 s calJac3.chr5 58116911 7 + 159171411 -GACAGCT i calJac3.chr5 C 0 C 0 s otoGar3.GL873542 22755030 3 + 22939663 GGA----- i otoGar3.GL873542 C 0 C 0 e cebCap1.NW_016107870v1 1047689 130 + 1231380 I e aotNan1.NW_018500483v1 2587225 201 + 11732439 I a score=8348.000000 s hg38.chr20_KI270870v1_alt 291 7 + 183433 GGGGGGG s panTro5.chr20 66301588 7 + 66533130 GGGGGGG i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928961 7 - 110113093 GGGGGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653760 7 - 92844088 gggggat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314187 7 + 96509753 gggggat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785687 7 - 16982598 gggggat i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chr5 58116918 6 + 159171411 GGGAGG- i calJac3.chr5 C 0 I 2 s cebCap1.NW_016107870v1 1047819 6 + 1231380 GGGGGG- i cebCap1.NW_016107870v1 I 130 I 1 s otoGar3.GL873542 22755033 7 + 22939663 GGGACAG i otoGar3.GL873542 C 0 C 0 e aotNan1.NW_018500483v1 2587225 201 + 11732439 I a score=-768.000000 s hg38.chr20_KI270870v1_alt 298 5 + 183433 ---AGCCG s panTro5.chr20 66301595 4 + 66533130 ---AG-CG i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928968 4 - 110113093 ---GC-CA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653767 4 - 92844088 ---ag-ca i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96314194 4 + 96509753 ---ag-ca i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16785694 4 - 16982598 ---ag-ca i macNem1.NW_012014244v1 C 0 I 1 s calJac3.chr5 58116926 4 + 159171411 ---AG-CC i calJac3.chr5 I 2 I 1 s saiBol1.JH378156 16186429 4 + 16356641 ---AG-CC i saiBol1.JH378156 N 0 I 1 s cebCap1.NW_016107870v1 1047826 4 + 1231380 ---AG-CC i cebCap1.NW_016107870v1 I 1 I 1 s otoGar3.GL873542 22755040 5 + 22939663 GTTAG--- i otoGar3.GL873542 C 0 C 0 e aotNan1.NW_018500483v1 2587225 201 + 11732439 I a score=5500.000000 s hg38.chr20_KI270870v1_alt 303 1 + 183433 G s panTro5.chr20 66301599 1 + 66533130 G i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928972 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653772 1 - 92844088 g i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96314199 1 + 96509753 g i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16785699 1 - 16982598 g i macNem1.NW_012014244v1 I 1 C 0 s manLeu1.NW_012101369v1 120162 1 + 156971 g i manLeu1.NW_012101369v1 N 0 C 0 s calJac3.chr5 58116931 1 + 159171411 G i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16186434 1 + 16356641 G i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1047831 1 + 1231380 G i cebCap1.NW_016107870v1 I 1 C 0 s otoGar3.GL873542 22755045 1 + 22939663 G i otoGar3.GL873542 C 0 C 0 e aotNan1.NW_018500483v1 2587225 201 + 11732439 I a score=132918.000000 s hg38.chr20_KI270870v1_alt 304 32 + 183433 GGGATAGCAT-TG----GGGACAGCA-T-GGGCACAGCA s panTro5.chr20 66301600 36 + 66533130 GGGATAGCAC-TGCCGAGGGACAGCA-T-GGGCACAGCA i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109928973 32 - 110113093 GGGATAGCG--GG----GGGATAGCATT-GGGGACAGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653773 32 - 92844088 gggatagcat-tg----gggacagca-t-gggcacagca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314200 32 + 96509753 gggatagcat-tg----gggacagca-t-gggcacagca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785700 32 - 16982598 gggatagcat-tg----ggcacagca-t-gggcacagca i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101369v1 120163 32 + 156971 gggatagcat-tg----gggacagca-t-gggcacagca i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58116932 33 + 159171411 GGGATAGTAT-TG----GGGACAGCA-TAGGGCACAGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186435 33 + 16356641 GGGATAGTAT-TG----GGGACAGCA-TGGGGCACAGCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1047832 33 + 1231380 GGGATGGTAT-TG----GGGACAGCA-TGGGGCACAGCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587426 33 + 11732439 GGGATAGTGT-TG----GGGACAGCA-TGGGGCACAGCG i aotNan1.NW_018500483v1 I 201 C 0 s otoGar3.GL873542 22755046 34 + 22939663 AGGATAGCATGTG----GGGACGTTG-AGGGGGACAGTG i otoGar3.GL873542 C 0 C 0 a score=-7282.000000 s hg38.chr20_KI270870v1_alt 336 2 + 183433 TG s panTro5.chr20 66301636 2 + 66533130 TG i panTro5.chr20 C 0 I 88 s gorGor5.CYUI01015848v1 401766 2 - 578057 tg i gorGor5.CYUI01015848v1 N 0 C 0 s nomLeu3.chr13 109929005 2 - 110113093 TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653805 1 - 92844088 t- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314232 1 + 96509753 t- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785732 1 - 16982598 t- i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101369v1 120195 1 + 156971 t- i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58116965 2 + 159171411 TG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186468 2 + 16356641 TA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1047865 2 + 1231380 TG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587459 2 + 11732439 TG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755080 1 + 22939663 -G i otoGar3.GL873542 C 0 C 0 a score=179641.000000 s hg38.chr20_KI270870v1_alt 338 26 + 183433 GGGGGCAGCGTGGGGGTGGGCAAGGA s panTro5.chr20 66301726 26 + 66533130 GGGGGCAGCGTGGGGGTGGGCAAGGA i panTro5.chr20 I 88 C 0 s panPan2.chr20 62012373 26 + 62195757 GGGGGCAGCGTGGGGGTGGGCAAGGA i panPan2.chr20 N 0 C 0 s gorGor5.CYUI01015848v1 401768 26 - 578057 gggggcagcgtgggggTGGGCAAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929007 26 - 110113093 GGGGGCGGCGTGGGCGTGGGCAAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653806 26 - 92844088 gggATCAGTGTGGGGGTGAACAAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314233 26 + 96509753 gggATCAGTGTGGGGGTGAACAAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785733 26 - 16982598 gggATCAGTGTGGGGGTGAACAAGGA i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101369v1 120196 26 + 156971 gggATCAGTGTGGGGGTGAACAAGGA i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58116967 26 + 159171411 GGGGGCAGTGTGGGAGTGGGCAGGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186470 26 + 16356641 GGGGTCATTGTGGGAGTGGGCAGGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1047867 26 + 1231380 GGGGTCAGTGTGGGAGTGGGCAAGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587461 26 + 11732439 GGGGGCAGTGTGGGAGTGGGCAAGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755081 26 + 22939663 GAGAACAGTATATGTGGGTAACAGGA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 176098 26 - 397369 GGGGGCAGCGAGGGGGTGGGCCGGAG i dasNov3.JH569290 N 0 C 0 a score=163355.000000 s hg38.chr20_KI270870v1_alt 364 24 + 183433 ACCCTTCACGTGGATTGTGGATTG s panTro5.chr20 66301752 24 + 66533130 ACCCTTCACGTGGATTGTGGATCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012399 24 + 62195757 ACCCTTCACGTGGATTGTGGATCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 401794 24 - 578057 AACCTTCACATGGATTGTGGATTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929033 24 - 110113093 ACCCTTCACGTGGATTGTGGATTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653832 24 - 92844088 AACCTTCACATGGATTGTGGATTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314259 24 + 96509753 AACCTTCACATGGATGGTGGATTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785759 24 - 16982598 AACCTTCACATGGATTGTGGATTG i macNem1.NW_012014244v1 C 0 I 1 s manLeu1.NW_012101369v1 120222 24 + 156971 AACCTTCACATGGATTGTGGATTG i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58116993 24 + 159171411 ACCCTTCACATGGATTGTGTATTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186496 24 + 16356641 ACCCTTCACATGGGTTGTGTATGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1047893 24 + 1231380 ACCCTTCACATGGATTGTGTATGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587487 24 + 11732439 ACCCTTCACGTGGATTGTGCATTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56773656 24 + 57149010 ACCCTTCCCATGGAATGTGCATTG i micMur3.chr18 N 0 C 0 s otoGar3.GL873542 22755107 11 + 22939663 ACTTTTCCCAT------------- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 176124 22 - 397369 --AGCTCGTGTGGAGGAGGGATTG i dasNov3.JH569290 C 0 C 0 a score=330269.000000 s hg38.chr20_KI270870v1_alt 388 46 + 183433 GGCAGGTAGAAGATGGAGATGACTTAAGCAGAAAGGGAGGGTTTTC s panTro5.chr20 66301776 46 + 66533130 GGCAGGTAGAAGATGGAGATGACTTAAGCAGAAAGGGAGGGTTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012423 46 + 62195757 GGCAGGTAGAAGATGGAGATGACTTAAGCAGAAAGGGAGGGTTTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 401818 46 - 578057 GGCAGGTAGAAGATGGAGATGACTTAAGCAGAAAGGGAGGGTTTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929057 46 - 110113093 GGCAGGTAGAAGACGGAGATGACTTAAGCAGAAAGGCAGGGTTTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653856 46 - 92844088 GGCAGGTAGAAGATGGAGGTGACTTAAGCAGAAAGGGAGGGTTTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314283 46 + 96509753 GGCAGGTAGAAGATGGAGGTGACTTAAGCAGAAAGGGAGGGTTTTC i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101369v1 120246 46 + 156971 GGCAGGTAGAAGATGGAGGTGACTTAAGCAGAGAGGGAGGGTTTTC i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58117017 45 + 159171411 GGCAGGTAGAATATGGGGGTGACTTAAGCAGAAAGGG-GGATTTTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186520 46 + 16356641 GGCAGGTAGAAGATGGGGGTGACTTAAGCAGAAAGGGAGGGTTTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1047917 46 + 1231380 GACAGGTAGAAGATGGGGATGACTTAAGCAGAAAGGGAGGGTTTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587511 46 + 11732439 GGCAGGTAGAAGATGGGGATGACTTAAGCAGAAAGGGAGGGTTTTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56773680 46 + 57149010 GGCACATAGAGGACAGAGGTGACCCAGGCAGAAAGGGAGGGTTTTA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22755118 31 + 22939663 --------------AGAGTTTCCCCAAGCAGAAAGAGAAGGTTTC- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 176146 46 - 397369 GGCAGTGCACAGCTGGAGGTGGCCCAGGCAGAAGGGCAGGGCGTCC i dasNov3.JH569290 C 0 C 0 e macNem1.NW_012014244v1 16785783 1 - 16982598 I a score=20312.000000 s hg38.chr20_KI270870v1_alt 434 3 + 183433 TGG s panTro5.chr20 66301822 3 + 66533130 TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012469 3 + 62195757 TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 401864 3 - 578057 TGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929103 3 - 110113093 TGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653902 3 - 92844088 TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314329 3 + 96509753 TGG i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101369v1 120292 3 + 156971 TGG i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58117062 3 + 159171411 TGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186566 1 + 16356641 T-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1047963 3 + 1231380 TGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587557 3 + 11732439 TGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56773726 3 + 57149010 TGG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22755149 3 + 22939663 TGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716465 3 + 182113224 TGT i mm10.chr2 N 0 C 0 s dasNov3.JH569290 176192 3 - 397369 TGG i dasNov3.JH569290 C 0 C 0 e macNem1.NW_012014244v1 16785783 1 - 16982598 I a score=221061.000000 s hg38.chr20_KI270870v1_alt 437 30 + 183433 GCAGAGGAAATGATGGACCTCAAATCTATC s panTro5.chr20 66301825 30 + 66533130 GCAGAGGAAATGATGGACCCCAAATCTATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012472 30 + 62195757 GCAGAGGAAATGATGGACCCCAAATCTATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 401867 30 - 578057 GCAGAGGAAATGATGGACCCCAAATCTATC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929106 30 - 110113093 GCAGAGGAAATGATGGGCTCCAAATCTATC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653905 30 - 92844088 GCAGAGGAAATGACGGACCCCAAATCCATC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314332 30 + 96509753 GCAGAGGAAATGACGGACCCCAAATCCATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785784 29 - 16982598 GCAGAGGAAATGACGGACCCC-AATCCATC i macNem1.NW_012014244v1 I 1 C 0 s manLeu1.NW_012101369v1 120295 30 + 156971 GCAGAGGAAATGACGGACCCCAAATCCATC i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58117065 30 + 159171411 GCAGAGAAAATGAGGAACCCCAAATCCATC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186567 29 + 16356641 -CAGAGAAAATGAGGAACCCCAAATCCATC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1047966 30 + 1231380 GCAGAGAAAATGAGGAACCCCAAATCCATC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587560 30 + 11732439 GCAGAGAAAACGAGGAACCCCGAATCCATC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56773729 28 + 57149010 GCAGAGGAAACGAGGGACCCC--ACCCATC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22755152 28 + 22939663 GCATAGGCAATGAGTTACCCT--GTCCATG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716468 30 + 182113224 GTGGTGGCAATGATGGTCTCTGTTTTTTTC i mm10.chr2 C 0 C 0 s dasNov3.JH569290 176195 29 - 397369 GTAGGGGCGG-GCCGGGCTGCGGGACCATC i dasNov3.JH569290 C 0 C 0 a score=204538.000000 s hg38.chr20_KI270870v1_alt 467 29 + 183433 CAGAGAAGAGAGAACTGAAGGGG-CTGGGG s panTro5.chr20 66301855 29 + 66533130 CAGAGGAGAGAGAACTGAAGGGG-CTGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012502 29 + 62195757 CAGAGGAGAGAGAACTGAAGGGG-CTGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 401897 29 - 578057 CAGAGGAGAGAGAACTGAAGGTG-CTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929136 23 - 110113093 CCGAGGAGACAGAACTGAAGGGG------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653935 29 - 92844088 CAGAGGAGAGAGAACTGAAGGGC-CCGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314362 29 + 96509753 CAGAGGAGAGAGAACTGAAGGGC-CTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785813 29 - 16982598 CAGAGGAGAGAGAACTGAAGGGC-CTGGGG i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219062 28 - 90373283 CAGAGGAGAGAGAACTG-AGGGC-CTGGGG i chlSab2.chr2 N 0 C 0 s manLeu1.NW_012101369v1 120325 29 + 156971 CAGAGGAGAGAGAACTGAAGGGC-CTGGGG i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58117095 27 + 159171411 CAGATGAGAGAG-ACCGAAGGGG-T-GGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186596 27 + 16356641 CAGATGAGAGAG-ACTGAAGGGG-C-GGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1047996 27 + 1231380 CAGATGAGAGAG-ACTGAAGGGG-C-GGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587590 27 + 11732439 CAGATGAGAGAG-ACCGAAGGGG-C-GGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56773757 29 + 57149010 CAGATAAGAGAGAACTGAAGGGG-CTGGGG i micMur3.chr18 C 0 I 124 s otoGar3.GL873542 22755180 27 + 22939663 CAGAT--GACAGAGCTGAAGGGG-CTGGGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716498 30 + 182113224 CAGCTGGGAGGGCATTGAGGGGAACTGGAG i mm10.chr2 C 0 C 0 s dasNov3.JH569290 176224 27 - 397369 CAGGTGACGGGGAGCCC-AGGGC-CAGGG- i dasNov3.JH569290 C 0 C 0 a score=344705.000000 s hg38.chr20_KI270870v1_alt 496 38 + 183433 ACAGCAGGTGGGATCTTGA----AGGCCCGGTTGGGGGAACT s panTro5.chr20 66301884 38 + 66533130 ACAGCAGGTGGGATCTTGA----AGGCCCGGCTGGGGGAACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012531 38 + 62195757 ACAGCAGGTGGGATCTTGA----AGGCCCGGCTGGGGGAACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 401926 38 - 578057 ACAGCAGGTGGGATCTTGA----AGGCCCGGTTGGGGGAACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929159 37 - 110113093 -CAGCAGGTGGGATCTTGA----AGGCCGAGTTGGGGGAACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92653964 38 - 92844088 ACAGCAGGTGGGATCCTGA----AGGCCCGGGTGGGGGAACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314391 38 + 96509753 ACAGCAGGTGGGATCCTGA----AGGCCCGGGTGGGGGAACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785842 38 - 16982598 ACAGCAGGTGGGATCCTGA----AGGCCTGGGTGGGGGAACT i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219090 36 - 90373283 ACAGAAGGT-GGATCCTGA----AGGCCGGGGTGGGGG-ACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 120354 38 + 156971 ACAGCAGGTGGGATCCTGA----AGGCCCGGGTGGGGGAACT i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58117122 38 + 159171411 ACAGCAGGTGGGGTCTTGA----AGGCCCGGTTGGAGGAACT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186623 38 + 16356641 ACAGCAGGTGGGGTCTTGA----AGGCCCGGTTGGGGGAACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048023 38 + 1231380 ACAGCAGGTGGGGTCTTGA----AGGCCTGGTTGGGGGAACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587617 38 + 11732439 ACAGCAGGTGGGGTCTTGA----AGGCCCGGTTGGGGGAACT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755207 38 + 22939663 AGAGCAGGTGGTGTCTGGA----ATGCTAGGTTGGGGGAACT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716528 38 + 182113224 ACAGCAGGTGAGGACTTGA----ATGCCAGAATGGGGACGCC i mm10.chr2 C 0 C 0 s dasNov3.JH569290 176251 39 - 397369 ---GCAGGTGTGTCCAGGATGCCAGGCACGCTTCAGGGAGGT i dasNov3.JH569290 C 0 I 2 e micMur3.chr18 56773786 124 + 57149010 I a score=184485.000000 s hg38.chr20_KI270870v1_alt 534 17 + 183433 CTGTTCTTCAGGCAGTG s panTro5.chr20 66301922 17 + 66533130 CTGTTCTTCAGGCAGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012569 17 + 62195757 CTGTTCTTCAGGCAGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 401964 17 - 578057 CTGTTCTTCAGGCAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929196 17 - 110113093 CTGTTCTTCAGGCAGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654002 17 - 92844088 CTGTTCTTCAGGCAGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314429 17 + 96509753 CTGTTCTTCAGGCAGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785880 17 - 16982598 CTGTTCTTCAGGCAGTG i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219126 16 - 90373283 CTGTTCTTCAGGCAGT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 120392 17 + 156971 CTGTTCTTCAGGCAGTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5471837 17 - 5823884 CTGTTCTTCAGGCAGTG i colAng1.NW_012114444v1 N 0 C 0 s calJac3.chr5 58117160 17 + 159171411 TTGTTCTTCAGGCAGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186661 17 + 16356641 TTGTTCTTCAGGTAGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048061 17 + 1231380 TTGTTCTTCAGGCAGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587655 17 + 11732439 TTGTTCTTCAGGAAGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755245 17 + 22939663 TTGTTTTTCAGGCAATA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716566 17 + 182113224 AAATTCTTTGGACATTG i mm10.chr2 C 0 C 0 s dasNov3.JH569290 176292 17 - 397369 CAGCTCATCCGGCAGTG i dasNov3.JH569290 I 2 C 0 e micMur3.chr18 56773786 124 + 57149010 I a score=868263.000000 s hg38.chr20_KI270870v1_alt 551 99 + 183433 GGGGGTTATGGGTGGTGCTTTAGCAGGAAAATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATGTTTGCCTGGACCCGGA-AAAAGGTGATT s panTro5.chr20 66301939 99 + 66533130 GGGGGTTATGGGTGGTGCTTTAGCAGGAAAATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATGTTTGCCTGGACCCGGA-AAAAGGTGATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012586 99 + 62195757 GGGGGTTATGGGTGGTGCTTTAGCAGGAAAATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATGTTTGCCTGGACCCGGA-AAAAGGTGATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 401981 99 - 578057 GGGGGTTATGGGAGGTGCTTTAGCAGGAAAATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATGTTTGCCTGGACCCGGA-AAAAGGTGATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929213 99 - 110113093 GGGGGTTATGGGTGGTGCTTTAGCAGGAAAATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATATTTGCCTGGACCCAGA-AAAGGGTGATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654019 99 - 92844088 GGGGGTTATGGGTGGTGCTTTAGCAGGAAGATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATATTTGCCTGGACCCAGA-AAAAGGCAGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314446 99 + 96509753 GGGGGTTATGGGTGGTGCTTTAGCAGGAAGATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATATTTGCCTGGACCCAGA-AAAAGGCAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785897 99 - 16982598 GGGGGTTATGGGTGGTGCTTCAGCAGGAAGATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATATTTGCCTGGACCCAGA-AAAAGGCAGTT i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219142 99 - 90373283 GGGGGTTATGGGTGGTGCTTTAGCAGGAAGATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATATTTGCCTGGACCCAGA-AAAAGGCGGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 120409 99 + 156971 GGGGGTTATGGGTGCTGCTTTAGCAGGAACATGACTGACAGCTGCAATGAGGTTTCTTATTGGTCCAGGATATTTGCCTGGACCCAGA-AAAAGGCAGTT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5471854 99 - 5823884 GGGGGTTATGGGTGGTGCTTTAGCAGGAAGATGACTGACAGCTGGAATGAGGTTTCTTATTGGTCCAGGATATTTGCCTGGACCCAGA-AAAAGGCGGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58117177 97 + 159171411 AGGGGTTATGGGTGATACTTTAGCAGGAAAATGAC--ATGGCTGGAATGAGATTTCTTGTTGATCCAGGATG-TTGCCTGGACCCAGAAAAAAGGTGATT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186678 97 + 16356641 AGGGGTTATGGGTGATACTTCAGCAGGAAAATGAC--GTGGCTGGAATGAGGTTTCTTAATTGATCAGGATG-TTGCCTGGACCCAGAGAAAAGGTGATT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048078 97 + 1231380 AGGGGTTATGGGTGATACTTTAACAGGAAAATGAC--ATGGCTGGAATGAGGTTTCTTATTGATCCAGGGTG-TTGCCTGGACCCAGAAAAAAGGTGATT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587672 97 + 11732439 AGGGTTTATGGGTGATACTTTGTCAGGAAAATGAC--ATGGCTGGAATGAGCTTTCTTATTGATCCAGGATG-TTGCCTGGACCCAGAAAAAAGGTGATT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755262 89 + 22939663 GGGGGTTGCAGGAGGTTCTTGAGCAGGAAAACGGC--------AGAACAA--TTTCTTACTGATCCATGACGGTCCCCTTGATCCAGA-AAAAGGTGATT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716583 80 + 182113224 GGAAGACATGGGAGGTCCTTGAG--------TGGTGGATAACTAGAGCAAGGTTCTTCACTGATA--------TTTCCT---CTTTCA-AAAAGATGACT i mm10.chr2 C 0 C 0 e micMur3.chr18 56773786 124 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C a score=685799.000000 s hg38.chr20_KI270870v1_alt 650 73 + 183433 CTGAAGAAAGTGCCCAGGGATCTAAAGCAAGTGTTC-CCTCCTTACAACCTCAAAGGGCCCCAACCGGAGGTGT s panTro5.chr20 66302038 73 + 66533130 CTGAAGAAAGTGCCCAGGAATCTAAAGCAAGTGTTC-CCTCCTTACAACCTCAAAGGGCCCCAACCGGAGGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012685 73 + 62195757 CTGAAGAAAGTGCCCAGGAATCTAAAGCAAGTGTTC-CCTCCTTACAACCTCAAAGGGCCCCAACCGGAGGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402080 73 - 578057 CTGAAGAAAGTGCCCAGGGATCTAAAGCAAGTGTTC-CCTCCTTACAACCTCAAAGGGCCCCAACCGGAGGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929312 73 - 110113093 CTGAAGAAAGTGCCCAGAGCTCTAAAGCAAGTGTTC-CCTCCTTATAACCTCAAAGGGCCCCAACCAGAGGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654118 73 - 92844088 CTGAAGACAGTGTCCAGGGCTCTAAAGCAAGTGTTC-CCTCCTTATAACCTCAAAGGGTCCCAACcagaggtgt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314545 73 + 96509753 CTGAAGACAGTGTCCAGGGCTCTGAAGCAAGTGTTC-CCTCCTTATAACCTCAAAGGGTCCCAACcagaggtgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16785996 73 - 16982598 CTGAAGACAGTGTCCAGGGCTCTAAAGCAAGTGTTC-CCTCCTTATAACCTCAAAGGGTCCCAACcagaggtgt i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219241 73 - 90373283 CTGAAGACAGTGTCCAGGGCTCTGAAGCAAGTGTTC-CCTCCTTATAACCTCAAAGGGTCCCAACCAGAGGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 120508 73 + 156971 CTGAGCACAGTGTCCAGGGCTCTAAAGCAAGTGTTC-CCTCCTTATAACCTCAAAGGGTCCCAACcagaggtgt i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5471953 72 - 5823884 CTGAAGACAGTGGCCAGGGCTCTAAAGTAACTGTT--CCTTCTTATAACCCCAAAGGGTCCCAACCAGAGGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58117274 73 + 159171411 CTGAAGAAAGGACCCAGGACTCTAAAGCAAGTGGTC-CTTCCTTATAACCTTAAAGGGCCCCAACTAAAGGTGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16186775 74 + 16356641 GTGAAGAAAGTACCTGGGACTCTAAAGCGAGTGGTCTTTTCCTTATAACCTCAAAGGGCCCCAACcaaaggtgc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048175 73 + 1231380 CTGAAGAAAGTACCCAGGATTCTAAAGCAAGTGGTC-TTTCCTTATAACTTCAAAGGGCCCCTGCCAAAGGTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2587769 73 + 11732439 CTGAAGAAAGTACCCAGGACTCTAAAGCAAGTGGTC-ACTCCTTATAACCTCAAAGGGCCCCAACcagaggtgc i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56773910 72 + 57149010 CTGAGGAAAGTGCTCAGAGCTCTAAAGAAAGTGGTT-CCTCCTTATAACCTCAAA-GGCCCCAACCAGGGGTGT i micMur3.chr18 I 124 I 418 s otoGar3.GL873542 22755351 61 + 22939663 AAGAAGAAAACGTTCAGGGCTCTGAACAAAGTTGTT------------CCTCAGA-GGCCCCAACCAGAAGTGT i otoGar3.GL873542 C 0 I 11 s mm10.chr2 181716663 46 + 182113224 CTGAAGAGAGCAGTCATGGT-----------------TCCCTTGATGGTATCATGGT-----------AGGTGT i mm10.chr2 C 0 C 0 e dasNov3.JH569290 176309 0 - 397369 C a score=1422920.000000 s hg38.chr20_KI270870v1_alt 723 145 + 183433 TATGTAGGTAGAGGCGGGACAGGGTAGT--GGGGGTGTTCAAGCTGCCACCAtcctagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgggccttgtttttcccatctggaaagtgagcaaggtggaccaTGCAGC s panTro5.chr20 66302111 145 + 66533130 TATGTAGGTAGAGGCGGGACAGGGTAGT--GGGGGTGTTCAAGCTGCCACCAtcctagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgggccttgtttttcccatctggaaagtgagcaaggtggaccaTGCAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012758 145 + 62195757 TATGTAGGTAGAGGCGGGACAGGGTAGT--GGGGGTGTTCAAGCTGCCACCAtcctagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgggccttgtttttcccatctggaaagtgagcaaggtggaccaTGCAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402153 145 - 578057 TATGTAGGTAGAGGCGGGACAGGGTAGT--GGGGGTGTTCAAGCTGCCACCAtcctagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgggccttgtttttcccatctggaaagtgagcaaggtggaccaTGCAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929385 144 - 110113093 TATGTAGGTAGAGGCAGGACAGGCTAGT--GGGGGTGTTCAAGCTTCCACCATCCTTGCCCTGTCCTCTTAGTGTCCCTGAGAAAAGC-TGTTCCCCTTT-GGCCTTGTTTTTCCCATCTGGAAAGTGAGCAAGGTGGACCATGTAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654191 145 - 92844088 tatgtaggtagaggcaggacagggtagt--gggggtgtttaagctgccaccatcccagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgggccttgtttttcccatctggaaagtgagcaaggtggaccatgtaac i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314618 145 + 96509753 tatgtaggtagaggcaggacagggtagt--gggggtgtttaagctgccaccatcccagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgggccttgtttttcccatctggaaagtgagcaaggtggaccatgtaac i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786069 145 - 16982598 tatgtaggtagaggcaggacagggtagt--gggggtgtttaagctgccaccatcccagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgggccttgtttttcccatctggaaagtgagcaaggtggaccatgtaac i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219314 145 - 90373283 TATGTAGGTAGAGGCAGGACGGGGTAGT--GGGGGTGTTCACGCTGCCACCAtcccagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgggccttgtttttcccatctggaaagtgagcaaggtggaccaTGTAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 120581 145 + 156971 tatgtaggtagaggcaggacagggtagt--gggggtgtttaagctgccaccatcccagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgggccttgtttttcccatctggaaagtgagcaaggtggaccatgtaac i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472025 144 - 5823884 TATGGAGGTAGAGGCAGGACAGGGTAGC---TGTGTGTTCAAGCTGCCACCAtcccagccctgtcctcttagtgtccctgagaaaagc-tgttcccctctgcgccttgtttttcccatctggaaagtgagcaaggtggaccatgtaac i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58117347 144 + 159171411 TATGTAGGTAGAGGCAGGACAGGGCAGT--GGGGGTGTTCAAGCTGCCACCAtcccagccctgtcctctgagtgtccctgagaaaagc-tgtt-ccccctgggccctgtttttcccatctggaaagtgagcaaggtggaccaTGTAGC i calJac3.chr5 C 0 I 2 s saiBol1.JH378156 16186849 143 + 16356641 tatgtaggtagaggcaggacagggcagt--gggggtgttcaagctgccaccatcccagccttgtcctcttagtgtccctgagaaaagc-tgtt--cccctgggccctgattttcccatctggaaagtgagcaaggtggaccaTGTAGC i saiBol1.JH378156 C 0 I 441 s cebCap1.NW_016107870v1 1048248 128 + 1231380 TATGTGGGTAGAGGCAGGACAGGGCAGT--GGGGGCGTTCTAGCTGCCACCACCCCAGCCCTGTCCTCTGAGTGTCCCTCAGAAAAGC-TGCT-----------------TTTCCCATCTGGAAAGTGAGCAAGGTGGACCATGTGGC i cebCap1.NW_016107870v1 C 0 I 8 s aotNan1.NW_018500483v1 2587842 146 + 11732439 catgtaggtagaggcaggacagggcagtgggggggggttcaagctgccaccatcccagccctgtcccctgaatgtccctgagaaaagc-tgtt-ccccctgggccctgtttttcccatctggaaagtgagcaaggtggaccaTGTAGC i aotNan1.NW_018500483v1 C 0 I 74 s otoGar3.GL873542 22755423 145 + 22939663 ggtgttggtggaggcaggacagggaagt--gggggtgttcatgct-ctgcctccccaactctatcctctatgtgtctctgagcaaaccttgtttccctttgggccttgttttccccatctggacattgtggaaggtggaccatataac i otoGar3.GL873542 I 11 C 0 s mm10.chr2 181716709 120 + 182113224 GGTATTGGTAGAGG-AGGAAGGGGCAGT---ACAGTGTCCATACC----CTGCCTCATTATGGTCCTCTTAGTATTTCTGAGCAA--C-TGTT-----------------TTCTCTGTTTGTTAGATGGGAAATGTGGATTATATAGT i mm10.chr2 C 0 C 0 e micMur3.chr18 56773982 418 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C a score=100869.000000 s hg38.chr20_KI270870v1_alt 868 14 + 183433 CACGTGTA----TATGTA s panTro5.chr20 66302256 14 + 66533130 CACGTGTA----TATGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012903 14 + 62195757 CACGTGTA----TATGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402298 18 - 578057 CACgtgtatatgtatgta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929529 14 - 110113093 CACgtgtg----tatgtg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654336 14 - 92844088 cACGTGTA----TAtgtg i rheMac8.chr10 C 0 I 106 s macFas5.chr10 96314763 14 + 96509753 cACGTGTA----TAtgtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786214 14 - 16982598 cACgtgta----tatgtg i macNem1.NW_012014244v1 C 0 I 138 s chlSab2.chr2 90219459 14 - 90373283 CACGTGTA----tgtgtg i chlSab2.chr2 C 0 I 198 s manLeu1.NW_012101369v1 120726 14 + 156971 cACgtgta----tatgtg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472169 14 - 5823884 cacatgtg----tgtgtg i colAng1.NW_012114444v1 C 0 I 44 s calJac3.chr5 58117493 14 + 159171411 Cgtgtgtg----tgtgtg i calJac3.chr5 I 2 C 0 s saiBol1.JH378156 16187433 14 + 16356641 CATGTGTG----CGTCCA i saiBol1.JH378156 I 441 C 0 s cebCap1.NW_016107870v1 1048384 14 + 1231380 tgtgtgca----cgtgtg i cebCap1.NW_016107870v1 I 8 C 0 s aotNan1.NW_018500483v1 2588062 14 + 11732439 tgtgtgtg----catgtg i aotNan1.NW_018500483v1 I 74 C 0 s otoGar3.GL873542 22755568 14 + 22939663 ttcATGTA----TGTGTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716829 14 + 182113224 CATATATA----GGTGCA i mm10.chr2 C 0 C 0 e micMur3.chr18 56773982 418 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C a score=10424.000000 s hg38.chr20_KI270870v1_alt 882 1 + 183433 T s panTro5.chr20 66302270 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012917 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402316 1 - 578057 t i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929543 1 - 110113093 t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654456 1 - 92844088 t i rheMac8.chr10 I 106 C 0 s macFas5.chr10 96314777 1 + 96509753 t i macFas5.chr10 C 0 I 170 s macNem1.NW_012014244v1 16786366 1 - 16982598 t i macNem1.NW_012014244v1 I 138 C 0 s chlSab2.chr2 90219671 1 - 90373283 t i chlSab2.chr2 I 198 C 0 s manLeu1.NW_012101369v1 120740 1 + 156971 t i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472227 1 - 5823884 t i colAng1.NW_012114444v1 I 44 C 0 s calJac3.chr5 58117507 1 + 159171411 t i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16187447 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048398 1 + 1231380 t i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588076 1 + 11732439 t i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755582 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716843 1 + 182113224 T i mm10.chr2 C 0 C 0 e micMur3.chr18 56773982 418 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C a score=23880.000000 s hg38.chr20_KI270870v1_alt 883 2 + 183433 GT s panTro5.chr20 66302271 2 + 66533130 GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012918 2 + 62195757 GT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402317 2 - 578057 gt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929544 2 - 110113093 gt i nomLeu3.chr13 C 0 I 14 s rheMac8.chr10 92654457 2 - 92844088 gt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314948 2 + 96509753 gt i macFas5.chr10 I 170 C 0 s macNem1.NW_012014244v1 16786367 2 - 16982598 gt i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219672 2 - 90373283 gt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 120741 2 + 156971 gt i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472228 2 - 5823884 gt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58117508 2 + 159171411 gt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16187448 2 + 16356641 GT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048399 2 + 1231380 gt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588077 2 + 11732439 gt i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755583 2 + 22939663 AT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716844 2 + 182113224 GT i mm10.chr2 C 0 C 0 e micMur3.chr18 56773982 418 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C a score=54939.000000 s hg38.chr20_KI270870v1_alt 885 6 + 183433 GTGTGT s panTro5.chr20 66302273 6 + 66533130 GTGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012920 6 + 62195757 GTGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402319 6 - 578057 gtgtgt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929560 6 - 110113093 gtgtgt i nomLeu3.chr13 I 14 C 0 s rheMac8.chr10 92654459 6 - 92844088 gtgtgT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314950 6 + 96509753 gtgtgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786369 6 - 16982598 gtgtgt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597025 6 - 3785965 gtgtgt i cerAty1.NW_012001373v1 N 0 C 0 s chlSab2.chr2 90219674 6 - 90373283 gtgTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 120743 6 + 156971 gcgtgt i manLeu1.NW_012101369v1 C 0 T 6597 s colAng1.NW_012114444v1 5472230 6 - 5823884 gtgtgt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58117510 6 + 159171411 gcgtgt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16187450 6 + 16356641 ACACGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048401 6 + 1231380 gcacat i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588079 6 + 11732439 gcacgt i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755585 6 + 22939663 GTGTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716846 6 + 182113224 GCACAG i mm10.chr2 C 0 C 0 e micMur3.chr18 56773982 418 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C a score=146211.000000 s hg38.chr20_KI270870v1_alt 891 17 + 183433 ACATGTGTGTGCAGGTG s panTro5.chr20 66302279 17 + 66533130 ACATGTGTGTGCAGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012926 17 + 62195757 ACATGTGTGTGCAGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402325 17 - 578057 acttgtgtgtgCAGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929566 17 - 110113093 gcgtgtgtgtgCAGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654465 17 - 92844088 GCGCATGTGTGCAGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314956 17 + 96509753 gcgCATGTATGCAGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786375 17 - 16982598 gcgcatgtgtgCAGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597031 17 - 3785965 gcacatgtgtgcAGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90219680 17 - 90373283 GCACATGTGTGCAGGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114152 17 + 156971 gcacatgtgtgCAGGTG i manLeu1.NW_012101369v1 T 6597 C 0 s colAng1.NW_012114444v1 5472236 17 - 5823884 gtgtgtgtgtgcaggtg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58117516 17 + 159171411 gtgcatgtgtgtgtgtg i calJac3.chr5 C 0 I 6836 s saiBol1.JH378156 16187456 17 + 16356641 GTATATGTGTGCAGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048407 17 + 1231380 gtgtatgtgtgtgcgtg i cebCap1.NW_016107870v1 C 0 I 46 s aotNan1.NW_018500483v1 2588085 17 + 11732439 atgtgtgtgtgCAGGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755591 11 + 22939663 --GTTTGTGTGGA---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716852 17 + 182113224 ACGTGTGTATATATATA i mm10.chr2 C 0 C 0 e micMur3.chr18 56773982 418 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C a score=596389.000000 s hg38.chr20_KI270870v1_alt 908 70 + 183433 ATGCGTGGTCAGACGAGACAGTGGGAAGAACAGCTGTCCCT--CCCCACTGCTGACTCCTAAGGGAGGCTCC s panTro5.chr20 66302296 70 + 66533130 ATGCGTGGTCAGACGAGACACTGGGAAGAACAGCTGTCCCT--CCCCACTGCTGACTCCTAAGGGAGGCTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62012943 70 + 62195757 ATGCGTGGTCAGACGAGACACTGGGAAGAACAGCTGTCCCT--CCCCACTGCTGACTCCTAAGGGAGGCTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402342 70 - 578057 ATGCGTGGTCAGACGAGACAGTGGGAAGAACAGCTGTCCCT--CCCCACTGCTGACTCCTAAGGGAGGCTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929583 70 - 110113093 GTGCATGGTCAGACGAGAGAGTGGGAAGAACAGCTGTCCCT--CCCCAGTGCTGACTCCTAAGGGAAGCTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654482 70 - 92844088 ATGCGTGGTCAGACGAGAGAGTGGGAAGAACAGCTGCCCCT--CCCCAGAGCTGACTCCTAAGGGAGGCTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96314973 70 + 96509753 ATGCGTGGTCAGACGAGAGAGTGGGAAGAACAGCTGCCCCT--CCCCAGAGCTGACTCCTAAGGGAGGCTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786392 70 - 16982598 ATGCGTGGTCAGACGAGAGAGTGGGAAGAACAGCTGCCCCT--CCCCAGAGCTGACTCCTAAGGGAGGCTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597048 67 - 3785965 ATGC---GTCAGACGAGAGAGTGGGAAGAACAGCTGCCCCT--CCCCAGAGCTGACTCCTAAGGGAGGCTCC i cerAty1.NW_012001373v1 C 0 I 27 s chlSab2.chr2 90219697 70 - 90373283 ATGCGTGGTCAGACGAGAGAGTGGGAAGAACAGCTGCCCCT--CCCCAGAGCTGACTCCTAAGGGAGGCTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114169 67 + 156971 ATGC---GTCAGACGAGAGAGTGGGAAGAACAGCTGCCCCT--CCCCAGAGCTGACTCCTAAGGGAGGCTTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472253 70 - 5823884 atgcgtggtcagatgagagagtgGGAAGAACAGCTGCCCCT--CCCCAGAGCTGACTCCGAAGGGAGGCTCC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16187473 68 + 16356641 ACACATGGTCAGAC--GAGTGTGGGAAGAACAGCTGCCCCT--CCCCAGTGCTGACTCCTAAGCCAGGGCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048470 70 + 1231380 ACACATGGTCAGACAAGAGCGTGGGAAGAACAGCTGTCCCT--CCCCAGTGCTGACTCCTAAGCGAGGGCAC i cebCap1.NW_016107870v1 I 46 C 0 s aotNan1.NW_018500483v1 2588102 70 + 11732439 ACACATGGTCAGACAAGAGCGTCGGAAGATCAGCTGCCCCT--CCCCAGTGCTGACTCCTAAGTGAGGGCAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755602 58 + 22939663 --GCATGGTTAGACAACAGGGTGGGAAGAAAAGCTGCCCCCCACCCCAGTGCTGACCTCC------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716869 53 + 182113224 ---------TATGCTATGTGATTGGAAAAGCA--------T--TCCAAGTATTGACTTTTGGCAGAGGACCC i mm10.chr2 C 0 C 0 e micMur3.chr18 56773982 418 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=1123559.000000 s hg38.chr20_KI270870v1_alt 978 157 + 183433 --TGGGGAGGTTGCCTCGTG--------ATGTGCATGTCCCATTGTGGCTGGCGGG-CGTGTCACGGCTGAGGAGTGCGGCAGCCTGGGGAAGTCCCTGGG-CTTGAGCACCTTTCC-TGATATGATCGCTTCTCTACTGTGTTTCTCCTCTGCA-TTGAGGCATTTAATC s panTro5.chr20 66302366 157 + 66533130 --TGGGGAGGTTGCCTCGTG--------ATGTGCATGTCCCATCGTGGCTGGCGGG-CGTGTCACGGCTGAGGAGTGCGGCAGCCCGGGGAAGTCCCTGGG-CTTGAGCACCTTTCC-TGATATGATCGCTTCTCTACTGTGTTTCTCCTCTGCA-TTGAGGCATTTAATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013013 157 + 62195757 --TGGGGAGGTTGCCTCGTG--------ATGTGCATGTCCCATCGTGGCTGGCGGG-CGTGTCACGGCTGAGGAGTGCGGCAGCCCGGGGAAGTCCCTGGG-CTTGAGCACCTTTCC-TGATATGATCGCTTCTCTACTGTGTTTCTCCTCTGCA-TTGAGGCATTTAATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402412 157 - 578057 --TGGGGAGGTTGCCTCGTG--------ATGTGCATGTCCCATCGTGGCTGGCGGG-CGTGTCACGGCTGAGGAGTGCGGCAGCCTGGGGAAGTCCCTGGG-CTTGAGCACCTTTCC-TGATATTATCGCTTCTCTACTGTGTTTCTCCTCTGCA-TTGAGGCATTTAATC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929653 165 - 110113093 --TGGGGAGGTTGCTCCGTGATGCGCATATGTGCATGTCCCTTCATGGCTGGCGGG-CGTGTCACGGCTGAGGAGTGCGGCAGCCTGGGGAAGTCCCTGGG-CTTGAGCACCTTTCC-TGATATTATCGCTTCTCTACTGTGTTTCTCCTCTGCA-TTGAGGCATTTAATC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654552 156 - 92844088 ---ACGGAGGTTGCTCCGTG--------ATGTGCATGTCCCTTCGTGGCTGGCTGG-CACGTCACGGCTGAGGAGTGCGGCGGCCTGGGGCAGTCCCTGTG-CTTGAGCACCTTTCC-GGCTGTTACCGCTTCTCTACTGTCTTTCTCCTCTACA-CTGAGGTGTTCAACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96315043 156 + 96509753 ---ACGGAGGTTGCTCCGTG--------ATGTGCATGTCCCTTCGTGGCTGGCTGG-CGCGTCACGGCTGAGGAGTGCGGCGGCCTGGGGCAGTCCCTGTG-CTTGAGCACCTTTCC-GGCTGTTACCGCTTCTCTACTGTCTTTCTCCTCTACA-CTGAGGTGTTCAACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786462 156 - 16982598 ---ACGGAGGTTGCTCCGTG--------ATGTGCATGTCCCTTCGTGGCTGGCTGG-CGCGTCACGGCTGAGGAGTGCGGCGGCCTGGGGCAGTCCCTGTG-CTTGAGCACCTTTCC-GGCTGTTACCGCTTCTCTACTGTCTTTCTCCTCTACA-CTGAGGTGTTCAACC i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219767 156 - 90373283 ---ACGGAGGTTGCTCCGTG--------ATGTGCATGTCCCTTCGTGGCTGGCTGG-CGCGTCACGGCTGAGGAGTGCGGCGGCCTGGGGCAGTCCCTGTG-CTTGAGCACCTTTCT-GGCTGTTACCGCTTCTCTACTGTCTTTCTCCTCTACA-CTGAGGCGTTCAACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114236 156 + 156971 ---ACGGAGGTTGCTCTGTG--------ATGTGCATGTCCCTTCGTGGCTGGCTGG-CGCCTCATGGCTGAGGAGTGTGGCGGCCTGGGGCAGTCCCTGTG-CTTGAGCACCTTTCC-GGCTGTTGCCACTTCTCTACTGTCCTTCTCCTCTACA-CTGAGGTGTTCAACC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472323 156 - 5823884 ---ACGGAGGTTGCTCCGTG--------ATGTGCAGGTCCCTTCGTGGCTGGCTGG-CGTGTCACGGCTGAGGAGTGCGGCGGCCTGGGGCAGTCCCTGTG-CTTGAGCACCTCTCC-GGCTGTTACCGCTTCTCTGCTGTGTTTCTCCTCTGCA-CTGAGGCATTCGATC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16187541 156 + 16356641 --TGGGGAGACTGCTTCACG--------ATGTGCATGTCCCTTCGTGGCTGGTGGG-CGTGCCACGGCTCAGGAGTGTGGCAGCCTGGGGTGGTCCCTGGG-CTTGAGCCCCTTTCC-TGCCATGATGGTGTCTCTACTGTGTCTCTCCTCTGCT-CTG-GGCATTACAAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048540 156 + 1231380 --TGGGGAGACTGCTTCACA--------ATGTGCATGTCCCTTCGTGGCTGGTGGG-CGTGACACGGCTCAGGAGTGTGGCAGCCTGGGGCGGTCCCTGGG-CTTGAGCCCCTTTCC-TGCCATGATGGCGTCTCTACTGTGTCTCTCCTCTGCG-CTG-GGCAGTACAAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588172 156 + 11732439 --TGGGGAGACTGCTTCACG--------ATGTGCACGTCCCTTCGTGGCCAGTGGG-CATGCCACGGCTCAGGAGTGCGGCAGCCTGGGGCGGTCCCTGGG-CTTGAGCCCCTTTCC-TGCCATGATGGTGTCTCTACTGTGTCACTCCTCTGCA-CTG-GGCATTACAAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755660 158 + 22939663 --TGGGGAGTCTGTTTCATG--------ATCTACATGCCCTTTTAGGGCTAGAGGG-TGTGTCATGAATCAGAAGTTCAGCAACCAGGGGCAATCCGTGTGTCTTGACCACCCTTCT-AGTTGTTAGTGTTTCGCTTCTATGTCTTTCTTCTACA-GTGGGATATTAACAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181716922 154 + 182113224 TTGTGGGAAACTATTCTATG--------ATCCATGTGTC---TCATGGTTAAAAGGATATGTCTTTGGCAAGACGTGCAGCAACCAGGGACAGTTTGTGAG-CCT---TGCCTTTCCTTGTCATCAGCATTTCTCTCCTATAT-TGTCCTCTGCATTTGGGATATTAAAA- i mm10.chr2 C 0 C 0 e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e micMur3.chr18 56773982 418 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=359230.000000 s hg38.chr20_KI270870v1_alt 1135 44 + 183433 TCTCAGAGGCACTTCCTGGATTAGAGCAGACAGGGAAGGTCCT-C s panTro5.chr20 66302523 44 + 66533130 TCTCAGAGGCACTTCCTGGATTAGAGCAGACAGGGAAGGTCCT-C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013170 44 + 62195757 TCTCAGAGGCACTTCCTGGATTAGAGCAGACAGGGAAGGTCCT-C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402569 43 - 578057 TCTCAGAGGCACTTCCTGGATTAGAGGAGACAGGGAAGGT-CT-C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929818 44 - 110113093 TCTCAGAGGCACTTCCTGGATTAGAGCAGACAGGGAAGGTCAT-C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654708 45 - 92844088 TCTCAGAGGCACTTCTTGGATTAGAGCAGGCAGGGAAGGTCATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96315199 45 + 96509753 TCTCAGAGGCACTTCTTGGATTAGAGCAGGCAGGGAAGGTCATGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786618 45 - 16982598 TCTCAGAGGCACTTCTTGGATTAGAGCAGGCAGGGAAGGTCATGT i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219923 45 - 90373283 TCTCAGCGGCACTTCTTGGATTAGAGCAGGCAGGGAAGGTCATGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114392 45 + 156971 TCTCAGAGGCACTTCTTGGATTAGAGCAGGCAGGGAAGGTCATGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472479 45 - 5823884 TCTCAGAGGCACTTCTTGGAGTAGAGCAGGCAGGGAAGGTCATGC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16187697 45 + 16356641 TCTCTCAGCCACTTCCTGAATTAGAGCAGACAAGGAAGGTCATCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048696 45 + 1231380 TCTCTCAGCCACTTCCTGCATTAGAGCAGACAAGGAAGGTCATCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588328 45 + 11732439 TGTCTCAGCCGCTTCCTGTATTAGAGCAGACAAGGAAGATCATCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56774400 44 + 57149010 TCTCAGAGCCACTTCCTGGATTAAAGCAAACAGGGAGGGTCATC- i micMur3.chr18 I 418 I 12 s otoGar3.GL873542 22755818 43 + 22939663 TCTTAGAGCCACTT-CTGGACTAGAGCAGACTAGGAAGGTCACC- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181717076 44 + 182113224 TTCTTGAGCCATTTACTGCAGTAGAGTAGAGAAGGAACGCCATC- i mm10.chr2 C 0 C 0 e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=85975.000000 s hg38.chr20_KI270870v1_alt 1179 12 + 183433 -TGCTGGCCAGAG s panTro5.chr20 66302567 12 + 66533130 -TGCTGGCCAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013214 12 + 62195757 -TGCTGGCCAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402612 12 - 578057 -TGCTGGCCAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929862 12 - 110113093 -TGCTGGCCAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654753 12 - 92844088 -TGCTGGGCAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96315244 12 + 96509753 -TGCTGGGCAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786663 12 - 16982598 -TGCTGGGCAGAG i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219968 12 - 90373283 -TGCTCGGCAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114437 12 + 156971 -TGCTGGGCAGAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472524 12 - 5823884 -TGCTCGGCAGAG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16187742 12 + 16356641 -TGCTCACCAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048741 12 + 1231380 -TTCTCACCAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588373 12 + 11732439 -TGTTCACCAGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755862 12 + 22939663 -TGCCCGTCAGAG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181717120 13 + 182113224 TTTTCCACCAGCA i mm10.chr2 C 0 C 0 e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e micMur3.chr18 56774444 12 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=453039.000000 s hg38.chr20_KI270870v1_alt 1191 54 + 183433 TCCCCAGAGAGAGCAATGCTCAGGAGCTGCCGTGGCCACACTGGCCCGAGAGGC s panTro5.chr20 66302579 54 + 66533130 TCCCCAGAGAGAGCGATGCTCAGGAGCTGCCGTGGCCACACTGGCCCGAGAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013226 54 + 62195757 TCCCCAGAGAGAGCGATGCTCAGGAGCTGCCGTGGCCACACTGGCCCGAGAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402624 54 - 578057 TCCCCAGAGAGAGCAATGCTCAGGAGCTGCCGTGGCCATACTGGCCCAAGAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929874 54 - 110113093 TCCCCAGAGAGAGCGATGCTCAGGGGCTGCTGCGGCCACACTGGCCCAAGAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654765 52 - 92844088 TCCCCAGAGAGAGCGATGCTCAGGGGCTGCTGTGGTCACACTGGCCCAagag-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96315256 51 + 96509753 TCCCCAGAGAGAGCGATGCTCAGGGG-TGCTGTGGCCACACTGGCCCAagag-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786675 52 - 16982598 TCCCCAGAGAGAGCGATGCTCAGGGGCTGCTGTGGCCACACTGGCCCAagag-- i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90219980 52 - 90373283 TCCCCAGAGAGAGCGGTACTCAGGGGCTGCTGTGGCCACACTGGCCCAAGAG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114449 52 + 156971 TCCCCAGAGAGAGCGATGCTCAGGGGCTGCTGTGGCCACACTGGCCCAagag-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472536 54 - 5823884 TCCCCAGAGAGAGCGATGCTCAGGGGCTGCTGTGGCCACACTGGCCCAAGAGGC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16187754 47 + 16356641 TCCCCAGAGAGATTGATGCTGAGGAGCTGCCCTGGCCATGCTGGC-----AG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048753 47 + 1231380 TCCCCAGACAGATCGATGCTCAGGGGCTGCCCTGGCCACGCTGGC-----AG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588385 47 + 11732439 TCCCCAGAGAGGTCAGTGCTCAGGAGCTGCCCTGGCCACGCTGGC-----AG-- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56774456 52 + 57149010 TCCCCAGAGAGAATGATGCTCAGGAACTGCC--AGCCACATTGGCCCGAGAGGC i micMur3.chr18 I 12 I 60 s otoGar3.GL873542 22755874 52 + 22939663 TCCCCAGAGAGAATGATGCTCAGGAATTGCT--AGCCACATTGGCCTGAGAGGG i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181717133 52 + 182113224 TCCCCAG--AGAACTAGTCTCAGAAACTGCTGTGGCTGCACTGGCTCAGGAGAC i mm10.chr2 C 0 C 0 e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=373745.000000 s hg38.chr20_KI270870v1_alt 1245 61 + 183433 CGCATGCAGCATGTTTCCAGCCAGTGGGCTGGGGTGACCATcttgggagtcag-gacactcc s panTro5.chr20 66302633 61 + 66533130 CGCATGCAGCATGTTTCCAGCCAGTGGGCTGGGGCGACCATcttgggagtcag-gacattcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013280 61 + 62195757 CGCATGCAGCATGTTTCCAGCCAGTGGGCTGGGGCGACCATcttgggagtcag-gacattcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402678 61 - 578057 CGCATGCAGCATGTTTCCAGCCAGTGGGCTGGGGTGACCATcttgggagtcag-gacactcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929928 61 - 110113093 AGCATGCAGCATGTTTTGAGCCAGTGGGCTGGGGTGACCATcctgggagtcag-aacactcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654817 57 - 92844088 -----gcagcatgttgtgagccagtgggctggggtgaccatcccaggagtcagaaacactct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96315307 57 + 96509753 -----gcagcatgttgtgagccagtgggctggggtgaccatcccaggagtcagaaacactct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786727 57 - 16982598 -----gcagcatgttgtgagccagtgggctggggtgaccatcccaggagtcagaaacactct i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90220032 57 - 90373283 -----CCAGCATGTtgtgagccagtgggctggggtgaccatcccaggagtcagaaacactcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114501 57 + 156971 -----gcagcatgttgtgagccagtgggctggggtgaccatcccaggagtcagaaacactcc i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472590 58 - 5823884 A----GCAGCATGTtgtgagcctgtgggctggggtgaccgccccaggagtcagaaacactcc i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16187801 59 + 16356641 --CACGCAGCATGCTTTgagccgctgggctgtgg-gaccatcccgggagtcagaaacaccct i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048800 59 + 1231380 --CACACGGCATGCTTTgagccactgggctgtgg-aaccatcctgggagtcagaaacacccc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588432 59 + 11732439 --CACACAGCATGCCTTgagccactgggctgtgg-gaccatcccgggagtcagaaaaacccc i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22755928 61 + 22939663 AGCACACATTGTGCTCTGAGCcagtggactggagtg-tagttccagaagtcataaacacctt i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181717185 49 + 182113224 AACACACGGCATGTTTG-----AGTTGGATGTG-------TGCCAggagtcagaaaaatat- i mm10.chr2 C 0 C 0 e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e micMur3.chr18 56774508 60 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=969314.000000 s hg38.chr20_KI270870v1_alt 1306 103 + 183433 gttctgagccctgctctgctttttaccagctctaaggccttaaaaaaacaacatagatcctcttggcctc-agtttcttcctctatagagtggggatcaaagta s panTro5.chr20 66302694 103 + 66533130 gttctgagccctgctctgctttttaccagctctaaggccttaaaaaaacaacatagatcctctgggcctc-agtttcttcctctatagagtggggatcaaagta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013341 103 + 62195757 gttctgagccctgctctgctttttaccagctctaaggccttaaaaaaacaacatagatcctctgggcctc-agtttcttcctctatagagtggggatcaaagta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402739 103 - 578057 gttctgagccctgctctgctttttaccagctctaaggccttaaaaaaacaacatagatcctctgggcctc-agtttcttcctctatagagtggggatcaaagta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109929989 103 - 110113093 gttctgagccctgctctgctttttaccagctctaagtcctcaaaaatacaacatagaccctctgggcctc-agtttcttcctctatagagtggggatcaaagta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654874 102 - 92844088 gttctgagccctgccctgctttttaccagctctaaggcctt-aaaaaacaacatagatcctgtaggcctc-agtttcttcctctatagagtggggatcaaagta i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96315364 103 + 96509753 gttctgagccctgccctgctttttaccagctctaaggccttaaaaaaacaacatagatcctgtaggcctc-agtttcttcctctatagagtggggatcaaagta i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786784 103 - 16982598 gttctgagccctgccctgctttttaccagctctaaggccttaaaaaaacaacatagatcctgtaggcctc-agtttcttcctctatagagtggggatcaaagta i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90220089 103 - 90373283 gttctgagctctgccctgctttttaccagctctaaggccttaaaaaaacaacatagatcctctaggcctc-agtttcttcctctatagagtggggatcaaagta i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114558 104 + 156971 gttctgagccctgccctgctttttaccagctctaaggccttaaaaaaacaacatagatcctctagacctcaagtttcttcctctatagagtggggatcaaagta i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472648 103 - 5823884 gctctgagccctgctctgctttttaccagctctaaggccttaaaaaaacaacatagatcctctcggcctc-agtttcttcctctgtagagtagggatcaaagca i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16187860 94 + 16356641 actctgagccctgctctgctttttaccagctctatg--tttaaaaaaacaacatagatcctctgggcctc-agtttcttcctctatagag-ggggatC------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048859 96 + 1231380 tctctgagtcctgctctgctttttactagctctaagaccttaaaaaaacaacatagaccctctggggctc-agtttcttcctttatggag-ggggatC------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588491 95 + 11732439 gctctgagccctgctctgctttttaccagctccaaggccttaaaaaaacaacatagatcctctgggcctc-agtttcttcctgtatagag-gggg-tc------ i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56774568 95 + 57149010 gttctgagccctgttctgcttcttactggccctaaggtcttaaagaagcaacttagatcc--------tc-agttccctccttgatagagtagggatcagtacg i micMur3.chr18 I 60 C 0 s otoGar3.GL873542 22755989 103 + 22939663 gttctgagccctgccctgctatttactggctctaaggccttaaaaaagcaccttagatcctctgagcttc-agttttctccttgatagagtggggttcaaaata i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181717234 101 + 182113224 gctctgagccccattttgcaccttagcagttctaag-ccttatgaaagctacttagttcctctgagtctc-agcttccttctccacagcgtagagattaaa-tg i mm10.chr2 C 0 C 0 e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=1039816.000000 s hg38.chr20_KI270870v1_alt 1409 116 + 183433 gtattttt--------gcaaatcttcaatgacataaattccccctgaagagcttggcacagGTATTTGCCATGATCATTGTCATTGTTGTTGTCTCTTCGTAATTGCGGCCTCTTTGTGCTTAT s panTro5.chr20 66302797 116 + 66533130 gtattttt--------gcaaatcttcaatgacataaattccccctgaagagcttggcacaggtatttgccataATCATTGTCATTGTTGTTGTCTCTTCGTAATTGCGGCCTCTTTGTGCTTAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013444 116 + 62195757 gtattttt--------gcaaatcttcaatgacataaattccccctgaagagcttggcacaggtatttgccataATCATTGTCATTGTTGTTGTCTCTTCGTAATTGCGGCCTCTTTGTGCTTAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402842 116 - 578057 gtattttt--------gcaaatcttcaatgacataaattctccctgaagagcttggcacaggtatttgccataATCATTGTCATTGTTGTTGTCTCTTCGTAATTGCGGCCTCTTTGTGCTTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109930092 116 - 110113093 gtattttt--------gcaaatcttcaatgacataaattccccctgaagagcttgtcacagGTATttgccatcatcattgtcattgttgttgtctcttcgtaattgtGGCCTCTTTGTGCTTAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92654976 115 - 92844088 gcattttt--------gtaaatcttcaatgacataaattcc-cccgaagagcttggcacaggtatttgccataATCATTGTCATTGTTGTTTTCTCTTTGTAATTGCGGCCTCTTTGTGCTTAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96315467 115 + 96509753 gcattttt--------gtaaatcttcaatgacataaattcc-cccgaagagcttggcacagatatttgccataATCATTGTCATTGTTGTTTTCTCTTTGTAATTGCGGCCTCTTTGTGCTTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16786887 115 - 16982598 gcattttt--------gtaaatcttcaatgacataaattcc-cccgaagagcttggcacaggtatttgccataATCATTGTCATTGTTGTTTTCTCTTTGTAATTGCGGCCTCTTTGTGCTTAT i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90220192 116 - 90373283 gcattttt--------gtaaatcttcaatgacataaattccgcctgaagagcttggcacaggtatttgccataATCATTGTCATTGTTGTTTTCTCTTCGTAATTGCGGCCTCTTTGTGCTTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114662 115 + 156971 gcattttt--------gtaaatcttcaatgacataaattcc-cccgaagagcttggcacaggtatttgccataATCATTGTCATTGTTGTTTTCTCTTTGTAATTGCGGCCTCTTTGTGCTTAT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5472751 116 - 5823884 gcattttt--------gtaaatcttcaatgacataaattccccctgaagagcttggcacaggtatttgccataATCATTGTCATTGTTGTTTTCTCTTCGTAATTGCGGCCTCTTTGTGCTTAT i colAng1.NW_012114444v1 C 0 I 318 s saiBol1.JH378156 16187954 97 + 16356641 ------------------AAATCTTCAATGACATACATTCCCCCTGAAGAGCTTGGTGCAGGTATCTGCCGTAAGCATGGCCATG---------TCTTCATGATTGCGGCCTCTTTGTGCTTAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1048955 96 + 1231380 ------------------AAATCTTCAATGACATACATT-CCCCTGAAGAGCTTGGTGCAGGTATTTGCTGTAAGCATTGTCATT---------TCTTGGTGATTGCGGCCTCTTTGCGCTTAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588586 97 + 11732439 ------------------aaaTCTTCAATGACATACATTCCCCCTGAAGAGCTTGGTGCAGGTGTTTGCCGTAAGCATTGTCATT---------TCTTCGTGATTGTAGCCTCTTTATGCTTAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56774663 116 + 57149010 gcattttt--------gtaagtcttaagtgagataaaatccatgtgaagaccttggcacaggtatctgccaTGATCATTTTCATTATTGCTGTTTGGTTGTAATTGAGGCCTTTTTGTGCTTAT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756092 109 + 22939663 ----tttt--------ataaatcttaagtgagataaaatccatgtgaagatcttggcacagatatctgatgtaatcattttcattat---tatttggttgtaattGAGGCCTTTTTATGCTTAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181717335 115 + 182113224 gcatttttgctttggggtaaacctcaaatgagataaaatctatgtgaagagcttggctcagATATCTACCATTATCATTAACATTGTTAT----TTATTGTAATTAAGGTCTC--TGGGAT--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47533958 114 + 47698779 GCATTTTT--------G-AAATCttaaacgagataaagtccgtgcgaagagctcggcgtag-tgtctgccaGTGTGGGGACCCTTGCTGTTATTTGGTCATAGTTGAGGCCCGTTTGTGCATAT i canFam3.chr24 N 0 C 0 e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=638727.000000 s hg38.chr20_KI270870v1_alt 1525 67 + 183433 TCATAATCCCTCTCTAACAGGCAGAATGGAGCCCCATATTTCCTCACGGCAGCTACACTGACACAGA s panTro5.chr20 66302913 67 + 66533130 TCATAATCCCTCTCTAACAGGCAGAACGGAGCCCCATATTTCCTCACCGCAGCTACACTGACACAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013560 67 + 62195757 TCATAATCCCTCTCTAACAGGCAGAACGGAGCCCCATATTTCCTCACCGCAGCTACACTGACACAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 402958 67 - 578057 TCATAATCCCTCTCTAAGAGGCAGAATGGAGCCCCATATTTCCTCATGGCAGCTACACTGACACAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109930208 67 - 110113093 TCATAATCCCTCTCTAAGAGGCAGAACTGAGCCCCATATTTCCTCATGGCAGCTACACTGACACAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92655091 67 - 92844088 TCATAATCCCTCTCTAAGAGGCAGAACTGAGCCCCATATTTCCTCGAGGCAGCTAAACTGACATAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96315582 67 + 96509753 TCATAATCCCTCTCTAAGAGGCAGAACTGAGCCCCATATTTCCTCGAGGCAGCTAAACTGACATAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787002 67 - 16982598 TCATAATCCCTCTCTAAGAGGCAGAACTGAGCCCCATATTTCCTCGAGGCAGCTAAACTGACATAGA i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90220308 67 - 90373283 TCATAATCCCTCTCTAAGAGGCAGAACTGAGCCCCATATTTCCTCGAGGCAGCTAAACTGACACAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114777 67 + 156971 TCATAATCCCTCTCTAAGAGGCAGAACTGAGCCCCATATTTCCTCGAGGCAGCTAAACTGACACAGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473185 67 - 5823884 TCATAATCCCTCTCTAAGAGGCAGAACTGAGCCCCATATTTCCTCGAGGCAGCTAAACTGACACAGA i colAng1.NW_012114444v1 I 318 C 0 s saiBol1.JH378156 16188051 67 + 16356641 TCATAATCACTCTCTCAGAGGCAGAACTGAGCCCCATACTTCCTCACAGCAGCTAAACTCACACAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1049051 67 + 1231380 TCATAATCAGTCTCTCAGAGGCAGAACTGAGTCCCATACTTCCTTACAGCAGCTAAACTCACACAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588683 67 + 11732439 TCATAATCACTCTCTCAGAGGTAGAACTGAGCCCCATACTTCCTCATGGCAGCTAAACTCACACAGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56774779 67 + 57149010 TCATAATTCCTCTCTAAGAGGCAGAACTAAACCCCAGATGGAAATCTGGCAGCTAAACTGATATAGA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756201 60 + 22939663 TCATAATTGCCCTGTAAGAGACAGAACTAAATCTCACATTTCCTCAGGGCAGCTAAACTG------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181717450 59 + 182113224 ---TAATG----TCTAAGAGACAGAACTTAATCTCAGATTCCCTGGTAGCAACTAAAC-ATCATGGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47534072 55 + 47698779 -----------TCCAAAGATGCGGAACTGA-CTCCAGATTCCTTTGTGGCAGCTTAGCTGACATGGA i canFam3.chr24 C 0 I 1 e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=286440.000000 s hg38.chr20_KI270870v1_alt 1592 28 + 183433 ATAGTGTCATCTTGGGTGCTGCTGCCAC s panTro5.chr20 66302980 28 + 66533130 ATAGTGTCATCCTGGGTGCTGCTGCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013627 28 + 62195757 ATAGTGTCATCCTGGGTGCTGCTGCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403025 28 - 578057 ATAGTGTCATCTTGGGTGCTGCTGCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109930275 28 - 110113093 ATAGTGTCATCTTGGGTGCTGCTGCCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92655158 28 - 92844088 ATAGTGTCATCTCGGGCGCTGCTGCCAC i rheMac8.chr10 C 0 I 811 s macFas5.chr10 96315649 28 + 96509753 ATAGTGTCATCTCGGGCGCTGCTGccac i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787069 28 - 16982598 ATAGTGTCATCTCGGGTGCTGCTGccac i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90220375 28 - 90373283 ATAGTGTCATCTCGGGTGCTGCTGCCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114844 28 + 156971 ATAGTGTCATCTCGGGTGCTGCTGccac i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473252 28 - 5823884 ATAGTGTCATCTCGGGTGCTGCTGccac i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16188118 28 + 16356641 ATAATGTCATCTCGGGTGCTGCTGccat i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1049118 28 + 1231380 ATAATGTCATCGCGGGTGCTGCTGCCAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2588750 28 + 11732439 ATAATGTCATCTCGGGTGCTGCTGccac i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56774846 28 + 57149010 ATATTGTTATCTCTGGAGCTGCTGCcac i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756261 28 + 22939663 ATATTGTTATCTCTAGTGCTGCTGccac i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181717509 22 + 182113224 CTACTGTTATCTCTAGTGCTac------ i mm10.chr2 C 0 C 0 e canFam3.chr24 47534127 1 + 47698779 I e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I a score=116335.000000 s hg38.chr20_KI270870v1_alt 1620 22 + 183433 TGCCAATATCGCCGCCACCATc s panTro5.chr20 66303008 22 + 66533130 TGCCAATATCGCCGccaccatc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013655 22 + 62195757 TGCCAATATCGCCGccaccatc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403053 22 - 578057 TGCCAATATCGCCGccaccatc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109930303 22 - 110113093 TGCCACTATCGTCGCCACCATC i nomLeu3.chr13 C 0 M 100 s macFas5.chr10 96315677 22 + 96509753 tgccaataccgccgccaccacc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787097 22 - 16982598 tgccaataccgccgccaccacc i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90220403 22 - 90373283 TGCCAATACCGCCGccaccacc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 114872 22 + 156971 tgccaataccgccgccaccacc i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473280 22 - 5823884 tgccaataccgccgccaccatc i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16188146 18 + 16356641 tgccaatacgactgccgc---- i saiBol1.JH378156 C 0 I 4 s cebCap1.NW_016107870v1 1049146 22 + 1231380 TGCCAATACGACTGCcaccact i cebCap1.NW_016107870v1 C 0 I 9 s aotNan1.NW_018500483v1 2588778 22 + 11732439 tgccaatacgactgccaccacc i aotNan1.NW_018500483v1 C 0 I 12 s micMur3.chr18 56774874 22 + 57149010 caccatcatcatcaccactatc i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756289 2 + 22939663 ca-------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181717531 9 + 182113224 ------------caccaccat- i mm10.chr2 C 0 C 0 e canFam3.chr24 47534127 1 + 47698779 I e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e rheMac8.chr10 92655186 811 - 92844088 I a score=136315.000000 s hg38.chr20_KI270870v1_alt 1642 23 + 183433 atcatcacaatcatcaccatcac s panTro5.chr20 66303030 23 + 66533130 atcatcacaatcatcaccatcac i panTro5.chr20 C 0 I 9 s panPan2.chr20 62013677 23 + 62195757 atcatcacaatcatcaccatcac i panPan2.chr20 C 0 I 9 s gorGor5.CYUI01015848v1 403075 23 - 578057 atcatcacaatcatcaccatcac i gorGor5.CYUI01015848v1 C 0 I 9 s macFas5.chr10 96315699 23 + 96509753 atcatcacagtcatcaccatcac i macFas5.chr10 C 0 I 4 s macNem1.NW_012014244v1 16787119 23 - 16982598 atcatcacagtcatcaccatcac i macNem1.NW_012014244v1 C 0 I 4 s chlSab2.chr2 90220425 23 - 90373283 atcatcacagtcatcaccatcac i chlSab2.chr2 C 0 I 4 s manLeu1.NW_012101369v1 114894 23 + 156971 atcatcacagtcatcaccatcac i manLeu1.NW_012101369v1 C 0 I 4 s colAng1.NW_012114444v1 5473302 23 - 5823884 accatcacagtcatcaccatcac i colAng1.NW_012114444v1 C 0 I 4 s saiBol1.JH378156 16188168 23 + 16356641 atcatcacagtcatcaccatcac i saiBol1.JH378156 I 4 C 0 s cebCap1.NW_016107870v1 1049177 23 + 1231380 atcaccactgtcatcaccatcac i cebCap1.NW_016107870v1 I 9 C 0 s aotNan1.NW_018500483v1 2588812 23 + 11732439 accatcaccatcatcaccgtcac i aotNan1.NW_018500483v1 I 12 C 0 s micMur3.chr18 56774896 17 + 57149010 ------atccccatcaccatcat i micMur3.chr18 C 0 I 12 s otoGar3.GL873542 22756291 13 + 22939663 ----------ccactaccatcgc i otoGar3.GL873542 C 0 I 12 s mm10.chr2 181717540 8 + 182113224 ------------actgccat--- i mm10.chr2 C 0 C 0 e canFam3.chr24 47534127 1 + 47698779 I e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I a score=427760.000000 s hg38.chr20_KI270870v1_alt 1665 110 + 183433 cac---catcatcaccactatcatcatcaccactatcaccaccaccagcaccttcattatcacattcaccatcctcaccatcctcaccaccacca--tcaccaccatcatcacca s panTro5.chr20 66303062 99 + 66533130 cac---catcatcaccactatcatcatcaccactatcaccaccaccagcaccatcattatcacat---------tcaccatcctcaccaccacca--tcaccaccatcatcac-- i panTro5.chr20 I 9 C 0 s panPan2.chr20 62013709 101 + 62195757 cac---catcatcaccactatcatcatcaccactatcaccaccaccagcaccatcattatcacat---------tcaccatcctcaccaccacca--tcaccaccatcatcacca i panPan2.chr20 I 9 C 0 s gorGor5.CYUI01015848v1 403107 101 - 578057 cac---catcatcaccattatcatcatcaccactatcaccaccaccaccaccatcatcatcacat---------tcaccatcctcaccaccatca--tcatcgctatcatcacca i gorGor5.CYUI01015848v1 I 9 C 0 s macFas5.chr10 96315726 86 + 96509753 cac---catcatcaccat------------caccaccaccaccaccatcacgttcatcatca------------tcaccatcatcaccatcatca--ccaccaccaccaccacca i macFas5.chr10 I 4 M 1911 s macNem1.NW_012014244v1 16787146 98 - 16982598 cac---catcatcaccatcaccaccaccaccaccaccaccaccaccaccacgttcatcatca------------tcaccatcatcatcaccacca--ccaccaccaccaccacca i macNem1.NW_012014244v1 I 4 I 24 s chlSab2.chr2 90220452 89 - 90373283 cac---catcatcaccat---------caccatcaccaccaccaccatcacattcatcatca------------tcaccatcatcaccatcatca--ccatcaccaccaccacca i chlSab2.chr2 I 4 I 18 s manLeu1.NW_012101369v1 114921 92 + 156971 cat---catcatcaccat------caccaccaccaccaccaccaccatcacgttcatcgtca------------tcaccatcatcatcaccatca--ccactatcaccaccatca i manLeu1.NW_012101369v1 I 4 I 21 s saiBol1.JH378156 16188191 103 + 16356641 caccagcatcatcaccatcgcaatcatcatcatcatcatcaccattgtcaccatcatcacca------------tcacctctgccatcatcatcaattcaccaccaccaccacca i saiBol1.JH378156 C 0 I 13 s cebCap1.NW_016107870v1 1049200 101 + 1231380 cacaatcaccaccaccatcgccatcatcactatcatcaccaccaccatcaccatcaccacca------------ccatcaccatcatcactatca--tcaccaccaccatcacca i cebCap1.NW_016107870v1 C 0 I 12 s aotNan1.NW_018500483v1 2588835 98 + 11732439 cac---caccaccagcatcacattcatcatcaccatcatcactatcaccaccatcatcacaa------------tcatcactgtcatcaccatca--tcaccaccgtcaccacca i aotNan1.NW_018500483v1 C 0 I 12 s micMur3.chr18 56774925 98 + 57149010 cac---caccatcaccatcatcatcatcaccatcaccaccatcaccatcaccatcaccatca------------tcatcatcaccaccaccatca--tcaccatcatcatcacca i micMur3.chr18 I 12 C 0 s otoGar3.GL873542 22756316 94 + 22939663 aac---taccatcaccat----accaccaccatcaccaccattatcaccaccatcgccacca------------tcaccaccattatcaccacca--ttgctaccatcaccacca i otoGar3.GL873542 I 12 C 0 s mm10.chr2 181717548 47 + 182113224 aac---caccataaccac------tataaccaccaccattaccaccatcacTTTCA----------------------------------------------------------- i mm10.chr2 C 0 C 0 e canFam3.chr24 47534127 1 + 47698779 I e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e colAng1.NW_012114444v1 5473325 4 - 5823884 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I a score=242034.000000 s hg38.chr20_KI270870v1_alt 1775 60 + 183433 tcatcatcatgaccatcaccaccatcaccactatcac------caccaccac---catcattaccatca s panTro5.chr20 66303161 57 + 66533130 -catcatcatgaccatcaccaccatcatcaccatcac------cactatcac---c--caccaccatca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013810 58 + 62195757 tcatcatcatgaccatcaccaccatcatcaccatcac------cactatcac---c--caccaccatca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403208 60 - 578057 ccatcatcaccatcctcactatcaccaccaccaccat------taccaccac---catcatcacagtca i gorGor5.CYUI01015848v1 C 0 C 0 s macNem1.NW_012014244v1 16787268 63 - 16982598 ccatcatcaccatcatcaccatcaccaccaccaccac------caccattacattcataatcatcacca i macNem1.NW_012014244v1 I 24 C 0 s chlSab2.chr2 90220559 60 - 90373283 cgttcatcatcaccatcaccatcatcaccaccatcac------catcatcac---caccatcaccatca i chlSab2.chr2 I 18 C 0 s manLeu1.NW_012101369v1 115034 66 + 156971 ctgtcatcatcaccatcaccactatcaccaccatcacgttcatcatcatcac---catcatcaccatca i manLeu1.NW_012101369v1 I 21 C 0 s saiBol1.JH378156 16188307 60 + 16356641 tcaccaccagcatcatcaccatcgccaccatcatcat------caccatcac---cattatcaccatca i saiBol1.JH378156 I 13 C 0 s cebCap1.NW_016107870v1 1049313 60 + 1231380 tcatcaccatcaccaccatcaccaccatcaccatcac------caccatcac---catcaccaccgtca i cebCap1.NW_016107870v1 I 12 C 0 s aotNan1.NW_018500483v1 2588945 60 + 11732439 tcatcaccatcaccaccgccaccaccaccagcatcat------cacaatcac---caccatcaccgtca i aotNan1.NW_018500483v1 I 12 C 0 s micMur3.chr18 56775023 60 + 57149010 ctatcatcaccatcaccatcatcatcatcaccaccac------catcatcac---catcatcatcatca i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756410 60 + 22939663 ccatcaccaccatcaccattaccaccatcatcaccgc------cattagcac---catcatcatcacca i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181717595 46 + 182113224 ---------TCATCATCACTATAGTCACC-----CTT------CCCTACCAC---TGTCATAAACatta i mm10.chr2 C 0 I 258 e canFam3.chr24 47534127 1 + 47698779 I e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e colAng1.NW_012114444v1 5473325 4 - 5823884 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=47705.000000 s hg38.chr20_KI270870v1_alt 1835 13 + 183433 tcatcac--gaccat s panTro5.chr20 66303218 13 + 66533130 tgaccat--caccat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013868 13 + 62195757 tgaccat--caccat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403268 13 - 578057 tcaccgt--caccat i gorGor5.CYUI01015848v1 C 0 C 0 s macNem1.NW_012014244v1 16787331 13 - 16982598 tcatcac--catcat i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90220619 13 - 90373283 tcaccac--caccat i chlSab2.chr2 C 0 I 429 s manLeu1.NW_012101369v1 115100 13 + 156971 tcatcac--caccac i manLeu1.NW_012101369v1 C 0 C 0 s saiBol1.JH378156 16188367 13 + 16356641 tcaccat--cacctc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1049373 13 + 1231380 tcaccat--caccac i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589005 13 + 11732439 tcaccat--caccac i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56775083 13 + 57149010 ccatcac--caccat i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756470 15 + 22939663 ccatcatgataccac i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47534127 1 + 47698779 I e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e colAng1.NW_012114444v1 5473325 4 - 5823884 I e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=35575.000000 s hg38.chr20_KI270870v1_alt 1848 11 + 183433 caccaccatca s panTro5.chr20 66303231 11 + 66533130 catcacagtca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013881 11 + 62195757 catcacagtca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403281 11 - 578057 catcaccatcc i gorGor5.CYUI01015848v1 C 0 C 0 s macNem1.NW_012014244v1 16787344 11 - 16982598 caccatcatca i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90221061 11 - 90373283 caccactatca i chlSab2.chr2 I 429 C 0 s manLeu1.NW_012101369v1 115113 11 + 156971 caccaccatca i manLeu1.NW_012101369v1 C 0 I 7681 s saiBol1.JH378156 16188380 11 + 16356641 taccatcatca i saiBol1.JH378156 C 0 I 2 s cebCap1.NW_016107870v1 1049386 11 + 1231380 gatcaccacca i cebCap1.NW_016107870v1 C 0 I 3 s aotNan1.NW_018500483v1 2589018 8 + 11732439 catcacca--- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56775096 11 + 57149010 caccatcacca i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756485 11 + 22939663 caccatcacca i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47534127 1 + 47698779 I e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e colAng1.NW_012114444v1 5473325 4 - 5823884 I e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=46075.000000 s hg38.chr20_KI270870v1_alt 1859 15 + 183433 tcaccatcac---cacta s panTro5.chr20 66303242 15 + 66533130 tcaccgtcac---catca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013892 15 + 62195757 tcaccgtcac---catca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403292 15 - 578057 tcactatcac---cacca i gorGor5.CYUI01015848v1 C 0 C 0 s macNem1.NW_012014244v1 16787355 15 - 16982598 tcaccatcac---cacta i macNem1.NW_012014244v1 C 0 I 15 s chlSab2.chr2 90221072 18 - 90373283 ccaccatcacgttcatca i chlSab2.chr2 C 0 C 0 s saiBol1.JH378156 16188393 15 + 16356641 tcaccaccac---caccg i saiBol1.JH378156 I 2 C 0 s cebCap1.NW_016107870v1 1049400 15 + 1231380 tcgccatcat---cacta i cebCap1.NW_016107870v1 I 3 C 0 s aotNan1.NW_018500483v1 2589026 15 + 11732439 tcagcatcac---attga i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56775107 15 + 57149010 tcaccatcat---catca i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756496 15 + 22939663 tcaccaccat---cacca i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47534127 1 + 47698779 I e cerAty1.NW_012001373v1 3597115 27 - 3785965 I e colAng1.NW_012114444v1 5473325 4 - 5823884 I e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e manLeu1.NW_012101369v1 115124 7681 + 156971 I e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=32102.000000 s hg38.chr20_KI270870v1_alt 1874 10 + 183433 tcaccaccac s panTro5.chr20 66303257 10 + 66533130 tcaccatcct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013907 10 + 62195757 tcaccatcct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403307 10 - 578057 ccaccattac i gorGor5.CYUI01015848v1 C 0 C 0 s macNem1.NW_012014244v1 16787385 10 - 16982598 tcatcatcat i macNem1.NW_012014244v1 I 15 C 0 s cerAty1.NW_012001373v1 3597142 10 - 3785965 Tcaccactat i cerAty1.NW_012001373v1 I 27 C 0 s chlSab2.chr2 90221090 10 - 90373283 tcaccatcac i chlSab2.chr2 C 0 C 0 s saiBol1.JH378156 16188408 7 + 16356641 ---ccatcac i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1049415 7 + 1231380 ---tcatcac i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589041 7 + 11732439 ---tcatcac i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56775122 10 + 57149010 tcaccaccac i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756511 10 + 22939663 tcatcaccac i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47534127 1 + 47698779 I e colAng1.NW_012114444v1 5473325 4 - 5823884 I e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e manLeu1.NW_012101369v1 115124 7681 + 156971 I e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=64351.000000 s hg38.chr20_KI270870v1_alt 1884 23 + 183433 caccatc---------attaccatcatcatca s panTro5.chr20 66303267 23 + 66533130 cactatc---------accaccaccatcatca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013917 23 + 62195757 cactatc---------accaccaccatcatca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403317 23 - 578057 caccacc---------atcatcacagtcatca i gorGor5.CYUI01015848v1 C 0 C 0 s macNem1.NW_012014244v1 16787395 32 - 16982598 caccatcctctctatcaccaccaccgtcatca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597152 32 - 3785965 caccaccattacattcatcatcaccatcatca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221100 32 - 90373283 caccaccnnnnnnnnnnccatcaccaccatca i chlSab2.chr2 C 0 C 0 s saiBol1.JH378156 16188415 23 + 16356641 cacagtc---------atcaccatcaccacca i saiBol1.JH378156 C 0 I 448 s cebCap1.NW_016107870v1 1049422 23 + 1231380 caccacc---------atcaccaccaccatca i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2589048 14 + 11732439 caccatc---------atcacaa--------- i aotNan1.NW_018500483v1 C 0 I 1 s micMur3.chr18 56775132 23 + 57149010 catcatc---------accatcatcatcatca i micMur3.chr18 C 0 I 1 s otoGar3.GL873542 22756521 23 + 22939663 catcacc---------attagcacgatcacca i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47534128 23 + 47698779 CATTGTC---------ATCTCCGGTGTTGCCG i canFam3.chr24 I 1 C 0 e colAng1.NW_012114444v1 5473325 4 - 5823884 I e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e manLeu1.NW_012101369v1 115124 7681 + 156971 I e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=-2860.000000 s hg38.chr20_KI270870v1_alt 1907 2 + 183433 cg- s panTro5.chr20 66303290 1 + 66533130 c-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013940 1 + 62195757 c-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403340 1 - 578057 c-- i gorGor5.CYUI01015848v1 C 0 C 0 s macNem1.NW_012014244v1 16787427 1 - 16982598 c-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597184 1 - 3785965 c-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221132 1 - 90373283 c-- i chlSab2.chr2 C 0 C 0 s cebCap1.NW_016107870v1 1049446 1 + 1231380 c-- i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2589063 1 + 11732439 c-- i aotNan1.NW_018500483v1 I 1 C 0 s micMur3.chr18 56775156 1 + 57149010 c-- i micMur3.chr18 I 1 C 0 s otoGar3.GL873542 22756545 1 + 22939663 c-- i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47534151 2 + 47698779 C-T i canFam3.chr24 C 0 C 0 e colAng1.NW_012114444v1 5473325 4 - 5823884 I e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e manLeu1.NW_012101369v1 115124 7681 + 156971 I e saiBol1.JH378156 16188438 448 + 16356641 I e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=2104.000000 s hg38.chr20_KI270870v1_alt 1909 8 + 183433 accatcac s panTro5.chr20 66303291 3 + 66533130 -----cat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013941 3 + 62195757 -----cat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403341 3 - 578057 -----cgt i gorGor5.CYUI01015848v1 C 0 C 0 s saiBol1.JH378156 16188886 5 + 16356641 ---atcat i saiBol1.JH378156 I 448 C 0 s cebCap1.NW_016107870v1 1049447 5 + 1231380 ---atcat i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589064 8 + 11732439 accaccat i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56775157 5 + 57149010 ---atcac i micMur3.chr18 C 0 I 3 s otoGar3.GL873542 22756546 5 + 22939663 ---atcac i otoGar3.GL873542 C 0 I 3 s canFam3.chr24 47534153 8 + 47698779 GCCCAcac i canFam3.chr24 C 0 C 0 e cerAty1.NW_012001373v1 3597185 0 - 3785965 C e colAng1.NW_012114444v1 5473325 4 - 5823884 I e chlSab2.chr2 90221133 0 - 90373283 C e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e manLeu1.NW_012101369v1 115124 7681 + 156971 I e macNem1.NW_012014244v1 16787428 0 - 16982598 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=142611.000000 s hg38.chr20_KI270870v1_alt 1917 30 + 183433 caccat---catcaccatcaccactatcaccac--- s panTro5.chr20 66303294 30 + 66533130 caccat---catcacagtcatcactgtcaccat--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013944 30 + 62195757 caccat---catcacagtcatcactgtcaccat--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403344 30 - 578057 caccat---catcaccatcctcactatcaccac--- i gorGor5.CYUI01015848v1 C 0 C 0 s macNem1.NW_012014244v1 16787428 33 - 16982598 catcatcaccatcaccatcactaccaccaccac--- i macNem1.NW_012014244v1 C 0 I 24 s cerAty1.NW_012001373v1 3597185 30 - 3785965 catcat---catcaccatcaccactatcaccac--- i cerAty1.NW_012001373v1 C 0 I 9 s chlSab2.chr2 90221133 28 - 90373283 caccac-----tcaccaccaccaccaccaccac--- i chlSab2.chr2 C 0 I 12 s colAng1.NW_012114444v1 5473329 30 - 5823884 caccat---catcgccatcaccactatcaccac--- i colAng1.NW_012114444v1 I 4 I 3 s saiBol1.JH378156 16188891 30 + 16356641 caccat---caccaccattatcaccatcatcac--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1049452 30 + 1231380 caccat---caccaccatcaccaccaccgtcac--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589072 30 + 11732439 caccat---cttcactatcatcaccaccaccac--- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56775165 30 + 57149010 catcgc---catcaccatcatcaccaccaccat--- i micMur3.chr18 I 3 C 0 s otoGar3.GL873542 22756554 27 + 22939663 tatccc---catcac---catcaccaccaccct--- i otoGar3.GL873542 I 3 C 0 s canFam3.chr24 47534161 33 + 47698779 caccac---cgcctccattatcactcctgccccgac i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e manLeu1.NW_012101369v1 115124 7681 + 156971 I e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=3955.000000 s hg38.chr20_KI270870v1_alt 1947 10 + 183433 ------caccaccatc s panTro5.chr20 66303324 10 + 66533130 ------catcacagtc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013974 10 + 62195757 ------catcacagtc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403374 10 - 578057 ------caccaccatc i gorGor5.CYUI01015848v1 C 0 I 213 s macNem1.NW_012014244v1 16787485 4 - 16982598 ------catc------ i macNem1.NW_012014244v1 I 24 C 0 s cerAty1.NW_012001373v1 3597224 4 - 3785965 ------catc------ i cerAty1.NW_012001373v1 I 9 C 0 s chlSab2.chr2 90221173 4 - 90373283 ------catc------ i chlSab2.chr2 I 12 C 0 s manLeu1.NW_012101369v1 122805 4 + 156971 ------catc------ i manLeu1.NW_012101369v1 I 7681 C 0 s colAng1.NW_012114444v1 5473362 4 - 5823884 ------cacc------ i colAng1.NW_012114444v1 I 3 C 0 s saiBol1.JH378156 16188921 10 + 16356641 ------catcacctct i saiBol1.JH378156 C 0 I 3 s cebCap1.NW_016107870v1 1049482 10 + 1231380 ------caccatcacc i cebCap1.NW_016107870v1 C 0 I 3 s aotNan1.NW_018500483v1 2589102 10 + 11732439 ------cagcatcatc i aotNan1.NW_018500483v1 C 0 I 3 s micMur3.chr18 56775195 10 + 57149010 ------catcaccatc i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756581 10 + 22939663 ------caccaccatc i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534194 10 + 47698779 agcctctgcc------ i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=134593.000000 s hg38.chr20_KI270870v1_alt 1957 30 + 183433 atcacca--tcaccatcatcacagtca-tcacc s panTro5.chr20 66303334 30 + 66533130 atcaccg--tcaccatcatcaccatcc-tcact i panTro5.chr20 C 0 C 0 s panPan2.chr20 62013984 30 + 62195757 atcaccg--tcaccatcatcaccatcc-tcact i panPan2.chr20 C 0 I 253 s gorGor5.CYUI01015848v1 403597 30 - 578057 atcacca--tcaccgctatcaccacca-ccacc i gorGor5.CYUI01015848v1 I 213 I 3 s macNem1.NW_012014244v1 16787489 30 - 16982598 atcacca--tcaccactatcaccacca-tcacg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597228 23 - 3785965 atcacca--tcctctctgtcaccac-------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221177 30 - 90373283 atcacca--tcaccaccatcaccacca-tcacc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122809 30 + 156971 atcacca--tcaccactatcaccacca-ttacg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473366 30 - 5823884 accacca--ccatcacgttcaccatca-tcacc i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16188934 29 + 16356641 atcatcaattcaccaccaccaccacca-tc--- i saiBol1.JH378156 I 3 C 0 s cebCap1.NW_016107870v1 1049495 27 + 1231380 gtcacca--tcaccatcaccaccatca-tc--- i cebCap1.NW_016107870v1 I 3 C 0 s aotNan1.NW_018500483v1 2589115 28 + 11732439 atcacca--ccatcaccgtcaccatcaccc--- i aotNan1.NW_018500483v1 I 3 C 0 s micMur3.chr18 56775205 30 + 57149010 atcatca--tcaccatcaccaccatca-ccacc i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756591 28 + 22939663 atcagca--tcatcaccaccaccatca-cca-- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534204 30 + 47698779 atcacca--cgaccattgccgctgtct-ccacc i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=95030.000000 s hg38.chr20_KI270870v1_alt 1987 18 + 183433 atcatcaccatcatcatc s panTro5.chr20 66303364 18 + 66533130 atcaccaccaccatcatc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014267 18 + 62195757 atcatcaccatcatcatc i panPan2.chr20 I 253 C 0 s gorGor5.CYUI01015848v1 403630 18 - 578057 atcatcaccatcatcatc i gorGor5.CYUI01015848v1 I 3 C 0 s macNem1.NW_012014244v1 16787519 18 - 16982598 ttcatcatcatcaccatc i macNem1.NW_012014244v1 C 0 I 30 s cerAty1.NW_012001373v1 3597251 16 - 3785965 --caccatcatcaccatc i cerAty1.NW_012001373v1 C 0 I 3 s chlSab2.chr2 90221207 18 - 90373283 accaccaccaccaccacc i chlSab2.chr2 C 0 I 6 s manLeu1.NW_012101369v1 122839 18 + 156971 ttcatcatcaccatcctc i manLeu1.NW_012101369v1 C 0 I 6 s colAng1.NW_012114444v1 5473396 14 - 5823884 atcattaccatcac---- i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16188963 18 + 16356641 actatcaccatcaccacc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1049522 18 + 1231380 accatcaccatcatcacc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589143 18 + 11732439 accaccaccatcatcacc i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56775235 18 + 57149010 atcaccatcaacatcatc i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756619 13 + 22939663 -----tactaccaccatc i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534234 18 + 47698779 gccacctccaccgccttc i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=6639.000000 s hg38.chr20_KI270870v1_alt 2005 2 + 183433 at s panTro5.chr20 66303382 2 + 66533130 at i panTro5.chr20 C 0 I 222 s panPan2.chr20 62014285 2 + 62195757 ac i panPan2.chr20 C 0 I 3 s gorGor5.CYUI01015848v1 403648 2 - 578057 ac i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90221231 2 - 90373283 ac i chlSab2.chr2 I 6 C 0 s manLeu1.NW_012101369v1 122863 2 + 156971 ac i manLeu1.NW_012101369v1 I 6 C 0 s colAng1.NW_012114444v1 5473410 2 - 5823884 at i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16188981 2 + 16356641 tc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1049540 2 + 1231380 at i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589161 2 + 11732439 at i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56775253 2 + 57149010 at i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22756632 2 + 22939663 at i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534252 2 + 47698779 ac i canFam3.chr24 C 0 C 0 e cerAty1.NW_012001373v1 3597267 3 - 3785965 I e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e macNem1.NW_012014244v1 16787537 30 - 16982598 I e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I e macFas5.chr10 96315812 1911 + 96509753 M a score=32211.000000 s hg38.chr20_KI270870v1_alt 2007 11 + 183433 caccactacca s panTro5.chr20 66303606 11 + 66533130 caccactacca i panTro5.chr20 I 222 C 0 s panPan2.chr20 62014290 11 + 62195757 caccactacca i panPan2.chr20 I 3 C 0 s gorGor5.CYUI01015848v1 403650 11 - 578057 caccactacca i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96317736 4 + 96509753 -------ATca i macFas5.chr10 M 1911 C 0 s macNem1.NW_012014244v1 16787567 4 - 16982598 -------atca i macNem1.NW_012014244v1 I 30 C 0 s chlSab2.chr2 90221233 11 - 90373283 gttcatcatca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122865 11 + 156971 caccaccatca i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473412 11 - 5823884 cacattcatcc i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16188983 11 + 16356641 caccaccatca i saiBol1.JH378156 C 0 I 6 s cebCap1.NW_016107870v1 1049542 11 + 1231380 caccaccatca i cebCap1.NW_016107870v1 C 0 I 3 s aotNan1.NW_018500483v1 2589163 11 + 11732439 caccaccacca i aotNan1.NW_018500483v1 C 0 I 129 s micMur3.chr18 56775255 11 + 57149010 caccattacca i micMur3.chr18 C 0 I 832 s otoGar3.GL873542 22756634 10 + 22939663 cacaactacc- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534254 6 + 47698779 tgccac----- i canFam3.chr24 C 0 C 0 e cerAty1.NW_012001373v1 3597267 3 - 3785965 I e mm10.chr2 181717641 258 + 182113224 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I a score=58051.000000 s hg38.chr20_KI270870v1_alt 2018 21 + 183433 tcacgctcacagtcatcacca s panTro5.chr20 66303617 21 + 66533130 tcatgctcacagtcatcacca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014301 21 + 62195757 tcatgctcacagtcatcacca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403661 21 - 578057 tcatgctcacagtcatcacca i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96317740 21 + 96509753 ccatcaccatcatcatcaccg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787571 21 - 16982598 ccatcaccatcatcatcaccg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597270 13 - 3785965 --------atcatcatcactg i cerAty1.NW_012001373v1 I 3 C 0 s chlSab2.chr2 90221244 21 - 90373283 tcaccatcctctctatcaaca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122876 21 + 156971 tcaccatcaccatcatcaccg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473423 21 - 5823884 ccatcaccatcctccctatca i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16189000 18 + 16356641 ---tcaccatgactatcacca i saiBol1.JH378156 I 6 C 0 s cebCap1.NW_016107870v1 1049556 18 + 1231380 ---tcaccatcgtcaccacca i cebCap1.NW_016107870v1 I 3 C 0 s otoGar3.GL873542 22756644 17 + 22939663 ----tcccactaccatcacca i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534260 16 + 47698779 -----ctgattgttaccacca i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e micMur3.chr18 56775266 832 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e aotNan1.NW_018500483v1 2589174 129 + 11732439 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I a score=274592.000000 s hg38.chr20_KI270870v1_alt 2039 42 + 183433 tcac--caccatgatcactgccatcatcacc---accaccatcacca s panTro5.chr20 66303638 42 + 66533130 tcac--caccatgatcactgccatcatcacc---accaccatcacca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014322 42 + 62195757 tcac--caccatgatcactgccatcatcacc---accaccatcacca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403682 42 - 578057 tcac--caccatgatcactgccatcatcacc---accaccatcacca i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96317761 42 + 96509753 tcac--caccatgatcactaccatcatcacc---accaccaccacca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787592 42 - 16982598 tcac--caccatgatcactaccatcatcacc---accaccaccacca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597283 42 - 3785965 tcac--caccatgatcactaccatcatcacc---accaccaccacca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221265 42 - 90373283 ccac--catcatcaccatcaccatcatcatc---accatcaccacca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122897 42 + 156971 tcac--caccatgatcactaccatcatcacc---accaCCACCACCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473444 42 - 5823884 ccat--caccatcaccatcatcaccatcacc---accaccaccacca i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16189018 47 + 16356641 tcacatcacattcattaccatcaccaccaccacgaccaccatgacca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1049574 42 + 1231380 tcac--caccgtcatcaccatcaccaccgtc---accaccatcacca i cebCap1.NW_016107870v1 C 0 I 719 s aotNan1.NW_018500483v1 2589303 42 + 11732439 tcat--caccatcatcaccaccaccaccatt---accaccatgacca i aotNan1.NW_018500483v1 I 129 C 0 s otoGar3.GL873542 22756661 42 + 22939663 ccac--tgccaacactatcactatcatgact---accactaccacca i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534276 42 + 47698779 tcag--cacagctaccgccaccataattacc---accttccctgcca i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e micMur3.chr18 56775266 832 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I a score=112417.000000 s hg38.chr20_KI270870v1_alt 2081 28 + 183433 ccatAA--TCCCCCCCAACTATTACAACCA s panTro5.chr20 66303680 28 + 66533130 ccatAA--TCCCCCCCAACTATTACAACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014364 28 + 62195757 ccatAA--TCCCCCCCAACTATTACAACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403724 28 - 578057 ccatAA--TCCCCCCCAACTATTACAATCA i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96317803 26 + 96509753 TAAT----CCCCCCCCAAATATTACAACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787634 26 - 16982598 tAAT----CCCCCCCCAAATATTACAACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597325 30 - 3785965 ccaTAATCCCCCCCCCAAATATTACAACCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221307 26 - 90373283 tgat----ccccCCCCAAATATTACAACCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122939 26 + 156971 TAAT----CCCCCCCCAAATATTACAACCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473486 26 - 5823884 tgat----cccccaccaAATATTATAGCCA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16189065 28 + 16356641 ccatAA--TCTTCCCCAACTATTACAACCA i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2589345 28 + 11732439 ccatAA--TCTCCCCCAACTATTACAACCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22756703 28 + 22939663 TCATAAT-TCCCTCTCTAGTACTACGACa- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534318 21 + 47698779 ---------ccatcaccactctcacaacTC i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e micMur3.chr18 56775266 832 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e cebCap1.NW_016107870v1 1049616 719 + 1231380 I e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M e rheMac8.chr10 92655186 811 - 92844088 I a score=52520.000000 s hg38.chr20_KI270870v1_alt 2109 8 + 183433 TTAACTTA s panTro5.chr20 66303708 8 + 66533130 TTAACTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014392 8 + 62195757 TTAACTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403752 8 - 578057 TTAACTTA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92655997 8 - 92844088 TTAACTGA i rheMac8.chr10 I 811 C 0 s macFas5.chr10 96317829 8 + 96509753 TTAACTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787660 8 - 16982598 TTAACTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597355 8 - 3785965 TTAACTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221333 8 - 90373283 TTAACTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122965 8 + 156971 TTAACTGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473512 8 - 5823884 TTGACTTA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16189093 8 + 16356641 TTTATTTA i saiBol1.JH378156 C 0 I 288 s aotNan1.NW_018500483v1 2589373 8 + 11732439 TTAATTTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22756731 8 + 22939663 ttaattca i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534339 8 + 47698779 ttagttca i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e micMur3.chr18 56775266 832 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e cebCap1.NW_016107870v1 1049616 719 + 1231380 I e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M a score=13897.000000 s hg38.chr20_KI270870v1_alt 2117 2 + 183433 TT s panTro5.chr20 66303716 2 + 66533130 TT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014400 2 + 62195757 TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403760 2 - 578057 TT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92656005 2 - 92844088 TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96317837 2 + 96509753 TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787668 2 - 16982598 TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597363 2 - 3785965 TT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221341 2 - 90373283 GT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122973 2 + 156971 TT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473520 2 - 5823884 TT i colAng1.NW_012114444v1 C 0 C 0 s aotNan1.NW_018500483v1 2589381 2 + 11732439 TT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22756739 2 + 22939663 tt i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534347 2 + 47698779 tt i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e micMur3.chr18 56775266 832 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e saiBol1.JH378156 16189101 288 + 16356641 I e cebCap1.NW_016107870v1 1049616 719 + 1231380 I e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M a score=9090.000000 s hg38.chr20_KI270870v1_alt 2119 1 + 183433 T s panTro5.chr20 66303718 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014402 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403762 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92656007 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96317839 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787670 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597365 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221343 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122975 1 + 156971 T i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473522 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16189389 1 + 16356641 T i saiBol1.JH378156 I 288 C 0 s cebCap1.NW_016107870v1 1050335 1 + 1231380 T i cebCap1.NW_016107870v1 I 719 C 0 s aotNan1.NW_018500483v1 2589383 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 I 296 s otoGar3.GL873542 22756741 1 + 22939663 t i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534349 1 + 47698779 c i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e micMur3.chr18 56775266 832 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e calJac3.chr5 58117533 6836 + 159171411 I e nomLeu3.chr13 109930325 100 - 110113093 M a score=81493.000000 s hg38.chr20_KI270870v1_alt 2120 8 + 183433 AACAAAAA s panTro5.chr20 66303719 8 + 66533130 AACAAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014403 8 + 62195757 AACAAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403763 8 - 578057 AACAAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92656008 8 - 92844088 AACAAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96317840 8 + 96509753 AACAAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787671 8 - 16982598 AACAAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597366 8 - 3785965 AACAAAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221344 8 - 90373283 AACAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122976 8 + 156971 AACAAAAA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473523 8 - 5823884 AACAAAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58124369 7 + 159171411 aacaaaa- i calJac3.chr5 I 6836 C 0 s saiBol1.JH378156 16189390 8 + 16356641 AACAAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1050336 8 + 1231380 AACAAAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589680 8 + 11732439 AACAAAAA i aotNan1.NW_018500483v1 I 296 C 0 s otoGar3.GL873542 22756742 8 + 22939663 aacaaaaa i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534350 8 + 47698779 gacagata i canFam3.chr24 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e micMur3.chr18 56775266 832 + 57149010 I e dasNov3.JH569290 176309 0 - 397369 C e nomLeu3.chr13 109930325 100 - 110113093 M a score=273808.000000 s hg38.chr20_KI270870v1_alt 2128 26 + 183433 TTTATTAATCACCAACGATTTTCCCA s panTro5.chr20 66303727 26 + 66533130 TTTATTAATCAACAACAATTTTCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014411 26 + 62195757 TTTATTAATCAACAACAATTTTCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403771 26 - 578057 TTTATTAATCACCAACAATTTTCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92656016 26 - 92844088 TTTATTAACCACCAACAACTTTCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96317848 26 + 96509753 TTTATTAACCACCAACAACTTTCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787679 26 - 16982598 TTTATTAACCACCAACAACTTTCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597374 26 - 3785965 TTTATTAACCACCAACAACTTTCCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221352 26 - 90373283 TTTATTAACCACCAACAACTTTCCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 122984 26 + 156971 TTTATTAACCACCAACAACTTTCCCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473531 23 - 5823884 TTTATTA---ACCAACAACTTTCCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58124376 23 + 159171411 ---attaatcaccaacaattctccca i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16189398 26 + 16356641 TTTATTAATCACCAACAATTTTCCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1050344 26 + 1231380 TTTATTAATCACCAACAATTTTCCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589688 26 + 11732439 TTTATTAATCACCAACAATTTTCCCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22756750 26 + 22939663 tttattaatcacttacaattttccca i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47534358 26 + 47698779 tttactaagcagccatcccgtgccca i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 176309 26 - 397369 TTTATTAAGCGCCCTCAAGTTTCCGA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181717641 258 + 182113224 I e micMur3.chr18 56775266 832 + 57149010 I e nomLeu3.chr13 109930325 100 - 110113093 M a score=289103.000000 s hg38.chr20_KI270870v1_alt 2154 33 + 183433 GCCCTTTCCAGCACCATTTCAGGTGCTTGGATA s panTro5.chr20 66303753 33 + 66533130 GCCCTTTCCAGCACCATTTCGGGTGCTTGGATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014437 33 + 62195757 GCCCTTTCCAGCACCATTTCGGGTGCTTGGATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403797 33 - 578057 GCCCTTTCCAGCACCATTTCAGGTGCTTGAATA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92656042 33 - 92844088 GCCCTTTCCAGCACCTTTTCAGGTGCTTGGATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96317874 33 + 96509753 GCCCTTTCCAGCACCTTTTCAGGTGCTTGGATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787705 33 - 16982598 GCCCTTTCCAGCACCTTTTCAGGTGCTTGGATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597400 33 - 3785965 GCCCTTTCCAGCACCTTTTCAGGTGCTTGGATA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221378 33 - 90373283 GCCCTTTCCAGCACCTTTTCAGGTGCTTGGATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 123010 33 + 156971 GCCCTTTCCAGCACCTTTTCAGGTGCTTGGATA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473554 33 - 5823884 GCCCTTCCCAGCACCTTTTCAGGTGCTTGGATA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58124399 33 + 159171411 gcccTTTCCAGCACCTTTTCCCATGCTCAGATA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16189424 33 + 16356641 GCACTTTCCAGCACCTTTTCCTGTGCTCGGATA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1050370 33 + 1231380 GCCCTTTCCAGCACCTTTTCCTGTGCTCAGATA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589714 33 + 11732439 GCCCTTTCCGGCACCTCTTCCCGTGCTCGGATA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22756776 23 + 22939663 gccct----------attccaggtacttgggta i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181717899 27 + 182113224 gcccttaccagc------tgagccatttggctg i mm10.chr2 I 258 C 0 s canFam3.chr24 47534384 17 + 47698779 -----------gagctgttc-----ctcggata i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 176335 15 - 397369 ----------GCCCCGTT--------TTGGATA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56775266 832 + 57149010 I e nomLeu3.chr13 109930325 100 - 110113093 M a score=1178841.000000 s hg38.chr20_KI270870v1_alt 2187 109 + 183433 CACTCATACCTTATTAGCATCCCTCCTGTCCCCCCGTCACCATTTTCGGTCTCCA-----------TTGCTAGGCAGCAGTGTGGACTTGGAAGCCTTTTGATATGTTCTTACAGATTCT s panTro5.chr20 66303786 109 + 66533130 CAATCATACCTTATTAGCATCCCTCCTGTCCCCCCGTCACCATTTTCGGTCTCCA-----------TTGCTAGGCAGCAGTGTGGACTTGGAAGCCTTTTGATATGTTCTTATAGATTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014470 109 + 62195757 CAATCATACCTTATTAGCATCCCTCCTGTCCCCCCGTCACCATTTTCGGTCTCCA-----------TTGCTAGGCAGCAGTGTGGACTTGGAAGCCTTTTGATATGTTCTTATAGATTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403830 109 - 578057 CAATCATACCTTATTAGCATCCCTCCCGTCCCCCCGTCACCATTTTCGGTCTCCA-----------TTGCTAGGCAGCAGTGTGGACTTGGAAGCCTTTTGATATGTTCTTATAGATTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109930427 107 - 110113093 CAATCATACCTTATTAGCATCCCTCCTGT--CCCTATCACCATTTTCTGTCTCCA-----------TTGCTAGACAGCAGTGTGGACTTGGAAGCCTTTTGACATGTTCTTATTGATTCT i nomLeu3.chr13 M 100 C 0 s rheMac8.chr10 92656075 107 - 92844088 CAATCATACCTTATTAGCATCCCTCCTGT--CCACGTCACCATTTTCTGTCTCCG-----------TTGCTAGATAGCAGTGTGGACTTGGAAGCCTTTTGGTATGTTCTTATAGATTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96317907 107 + 96509753 CAATCATACCTTATTAGCATCCCTCCTGT--CCACGTCACCATTTTCTGTCTCCG-----------TTGCTAGATAGCAGTGTGGACTTGGAAGCCTTTTGGTATGTTCTTATAGATTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787738 107 - 16982598 CAATCATACCTTATTAGCATCCCTCCTGT--CCATGTCACCATTTTCTGTCTCCG-----------TTGCTAGATAGCAGTGTGGACTTGGAAGCCTTTTGGTATGTTCTTATAGATTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597433 107 - 3785965 CAATCATACCTTATTAGCATCCCTCCTGT--CCGTGTCACCATTTTCTGTCTCCG-----------TTGCTAGATAGCAGTGTGGACTTGGAAGCCTTTTGGTATGTTCTTATAGATTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221411 107 - 90373283 CAATCATACCTTATTAGCATCCCTCCTGT--CCGTGTCACCATTTTCTGTCTCTG-----------TTGCTGGATAGCAGTGTGGACTTGGAAGCCTTTTGGTATGTTCTTATAGATTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 123043 107 + 156971 CAATCATACCTTATTAGCATCCCTCCTGC--CCGTGTCACCATTTTCTGTCTCCG-----------TTGCTAGATAGCAGTGTGGACTTGGAAGCCTTTTGGTATGTTCTTATAGATTCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473587 107 - 5823884 CAATCATACCTTATTAGCATCCCTCCTGT--CCCTGTCATCATTTTCTGTCTCCG-----------TTGCTAGATAGCAGGGTGGACTTGGAAGCCTTTTGGTATGTTCTTATAGATTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58124432 107 + 159171411 CAATCATACCTCATTGGCATCCCTCCTGT--GCCTGTCACCATCTTCTGTCTCTC-----------TTGCTGGACAGCAGTGTGGACTTGGAAGTCTCTTGGTATCTTCTTACAGACTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16189457 118 + 16356641 CAATCATACCTCATTAGCATCCCTCCTGT--GCCTGTCACCATTTTCTGTCTTTATTGCTAGACAGTTGCTAGACAGCAGTGTGGACTTGGAAGTCTCTTGGTATGTTCTTATGGACTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1050403 118 + 1231380 CAATCACACCTCATTAGCATCCCTCCTGC--GCCTGTCACCATTTTCTGTCTCTATTGCTAGACAGTTGCTAGACAGCAGTATGGACTTGGAAGTCTTTTGGTATGTTCTTATGGACTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589747 105 + 11732439 CAATCTTACCTCATTAGCATCCCTCCTGT--GCCTGTCACCATTTTCTGTCTCTA-----------TTGCTAGACAGCAGTGTGGACTGGGAAGTC--TTGGTAAGTTCTTATAGACTCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22756799 101 + 22939663 caatca-gtCCCATTAGCATCCCTTCTGT--TCCTGTAACCATTTTATGTCTCCA-----------TTGCTGGACAACAGTGTG-----GGAAGGACTTTGATATTTTCTTATGGACTCT i otoGar3.GL873542 C 0 I 7 s mm10.chr2 181717926 71 + 182113224 ----------------------------------gaccACCATTTTCTGTTTTCA-----------TTGCTAGACAACATTGTGCACTTGGAAGATCTTTGATGAACT-TTACAGGC--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47534401 105 + 47698779 cagcCAGACCTCACTAGCACCCCTCCCAG--CCCCGTCACCACTTCCTGTCT--A-----------TCCCTAGACCACAACATGGCCTGGGAGGGCCGTGGATGTGCCCTTACAGACTTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 176350 76 - 397369 -AGGCAGATGCCACCAGCCGACTGCCTGC--CCCTGCCACTGTTTCCCGT----G-----------TGGCCA--------------------------CTGATGTGTCCTTAGAGGTAAC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56775266 832 + 57149010 I a score=1040167.000000 s hg38.chr20_KI270870v1_alt 2296 75 + 183433 GGAGCCCTCAGAAACCTCTGGCAACTGTAGGGTCAGCATTTGAGTCTGTGAGGGGTCATGGAGGGGACTCAAAAG s panTro5.chr20 66303895 75 + 66533130 GGAGCCCTCAGAAACCTCTGGCAACTGTAGGGTCAGCATTTGAGTCTGTGAGGGGTCATGGAGGGGACTCAAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014579 75 + 62195757 GGAGCCCTCAGAAACCTCTGGCAACTGTAGGGTCAGCATTTGAGTCTGTGAGGGGTCATGGAGGGGACTCAAAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 403939 75 - 578057 GGAGCCCTCAGAAACCTCTGGCAATTGTAGGGTCAGCATTTGAGTCTGTGAGGGGTCATGGAGGGGACTCAAAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109930534 74 - 110113093 GGAGCCCTCAGAAACCTCTGGCAACTGTAGGGTCAGCA-TTGACTTTGTGAGGGGTCATGGAGGGGACTCAAAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92656182 75 - 92844088 GGAGCTCTCAGAAACCTCTGGCAACTGTAGGGTCAGCATTTGAGTCTGTGAAGGGTCTCTGAGGGGACTCAAAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96318014 75 + 96509753 GGAGCTCTCAGAAACCTCTGGCAACTGTAGGGTCAGCATTTGAGTCTGTGAAGGGTCTCTGAGGGGACTCAAAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787845 75 - 16982598 GGAGCTCTCAGAAACCTCTGGCAACTGTAGGGTCAGCATTTGAGTCTGTGAAGGGTCTCTGAGGGGACTCAAAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597540 75 - 3785965 GGAGCTCTCAGAAACCTCTGGCAACTGTAGGGTCAGCATTTGAGTCTGTGAAGGGTCTCTGAGGGGACTCAAAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221518 75 - 90373283 GGAGCTCTCAGAAACCTCTGGCAACTGTAGGGTCAGCATTTAAGTCTGTGAAGGGTCTCTGAGGGGACTCAAAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 123150 75 + 156971 GGAGCTCTCAGAAACCTCTGGCAACTGTAGGGTCAGCATTTGAGTCTGTGAAGGGTCTCTGAGGGGACTCAAAAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473694 75 - 5823884 GGAGCTCTCAGAAACCTCTGGCAACTGCAGGGTCAGCATCTGAGTCTGTGAAGGGTCTCGGAGGGGACTCAAAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58124539 75 + 159171411 GGAGCCCTCAGAAACCTCTGGCAACTGTCCGGACAGCATTTGAGTCTGTGAGGGGTCTTCGAAGAGACTCAAAAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16189575 75 + 16356641 GGAGCCCTTAGAAACCTCTGGCAACTGTAGGGACAGCATTTGAGTCTGTGAGGGGTCTTGGAGGAGACTCAAAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1050521 75 + 1231380 GGAGCCCTCAGAAACCTCTGGCAACTGTAGGGACAGCATTTGAGTCTGTGAGGGGCCTTGGAGGAGATTCGAAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589852 75 + 11732439 GGAGCCCTCAGAAACCTCTGGCAACTGTACGGACAGCATTTGAGTCTGTGAGGGGTCTTGGAGGAGACTCAAAAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56776098 75 + 57149010 GGAGCCCTCAGAAACCTCTGGCAGCTGGAGGGTCAGCATTTGAGTCTACGAGGGGTTTTGGGGGAGACTCAAAAG i micMur3.chr18 I 832 I 302 s otoGar3.GL873542 22756907 75 + 22939663 GGAGCCCTCAGAAACCTCTGTCAGCTGTAGGGCCAGCATTTGAATCCATGAGGGGTCTTTAGGGAGACTCAAAAT i otoGar3.GL873542 I 7 C 0 s mm10.chr2 181717997 47 + 182113224 AGTGCCCTGAAAACCCTCTGA----------------------------GAGGAGTCTTAAGAGAGACTGAGGAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47534506 75 + 47698779 GGAGCCCTCAGATGCCTCTGGTGTCTGTAGGGCCAACGTTGTAATCCGTGAAGGGTCTTCAGGAAGACTTGAAAG i canFam3.chr24 C 0 I 4 s dasNov3.JH569290 176426 62 - 397369 --GGGCCTTGGAAACCGCTGACAGCCCTTGGGCCAGTGTCTTAGTCAGTGAGGGCCCTGGGGGG----------- i dasNov3.JH569290 C 0 C 0 a score=3182470.000000 s hg38.chr20_KI270870v1_alt 2371 305 + 183433 CAAGGGGAGCAGACTCTTTCCCTTAGGGCTCT-AAACCTTTGCTCCTGTGCAGAATCCGGGGTGTGTTCTGGTAG-CCTACATG-CCCTGACTCCTCTAAAGTAGACCTGTGTTTAAGG-CTTGGAATC--cttctgtgtgtgtcagagtcac-ttgaggagctggttaagacgtttgaccccaggccctaccccctgagactgactc-atgagtctcaggttgggtccaggagctatcacttaccaagcccccatgggaactctgatgttaagggactcagggccacTGTAGCTTG-TGGTGGC--CAAGAGGAG-- s panTro5.chr20 66303970 305 + 66533130 CAAGGGGAGCAGGCTCTTTCCCTTAGGGCTCT-AAACCTTTGCTCCTGTGCAGAATCCGGGGTGTGTTCTGGTAG-CCTACATG-CCCTGACTCCTCTAAAGTAGACCTGTGTTTAAGG-CTTGGAATC--cttctgtgtgtgtcagagtcac-ttgaggagctggttaagacgtttgaccccaggccccaccccctgagactgactt-gtgagtctcaggttgggtccaggagctgtcacttaccaagcccccatgggaactctgatgttAAGGGACTCAGGGCCAGTGTAGCTTG-TGGTGGC--CAAGAGGAG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014654 305 + 62195757 CAAGGGGAGCAGGCTCTTTCCCTTAGGGCTCT-AAACCTTTGCTCCTGTGCAGAATCCGGGGTGTGTTCTGGTAG-CCTACATG-CCCTGACTCCTCTAAAGTAGACCTGTGTTTAAGG-CTTGGAATC--cttctgtgtgtgtcagagtcac-ttgaggagctggttaagacgtttgaccccaggccccaccccctgagactgactt-gtgagtctcaggttgggtccaggagctgtcacttaccaagcccccatgggaactctgatgttAAGGGACTCAGGGCCAGTGTAGCTTG-TGGTGGC--CAAGAGGAG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 404014 305 - 578057 CAAGGGGAGCAGGCTCTTTCCCTTAGGGCTCT-AAACCTTTGCTCCTGTGCAGAATCTGGGGTGTGTTCTGGTAC-CCTACATG-CCCTGACTCCTCTAAAGTAGACCCGTGTTTAAGG-CTTGGAATC--cttctgtgtgtgtcagagtcac-ttgaggagctggttaagacgtttgaccccaggccccaccccctgagactgactc-atgagtctcaggctgggtccaggagctgtcacttaccaagcccccatgggaactctgatgttAAGGGACTCAGGGCCAGCGTAGCTTG-TGGTGGC--CAAGAGGAG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109930608 305 - 110113093 CAAGGAGAGCAGGCTCTTTCCCTTAGGGCTCT-AAACCTTTGCTCCTGTGCAGAATCCAGGGTGTGTTCTGGCAC-CCTACATG-CCCCGACTCCTCTAAAGTAGACCCGTGTTTAAGG-CTTGGAATC--CTTTTGTGTgtgtcagagtcac-ttgaggagctggttaagatgtttgaccccaggccccatcccctgagactgactcagtgagtctcagg-tgggtccaggacctgtcacttaccaagcccccatgggaattctgatgTTAAGGGACTCAGGGCCAGTGTAGCTTG-TGGTGGC--CAAGAGGAG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92656257 304 - 92844088 CAAGGAGAGCAGGCTTTTTCCCTTAGGGCTCT-AACCCTTCGCTCCCGTG--GAGTCTGGGGTGAGTTCTCGTAC-CCTACATG-CCCTGACCCCTGTAAAGTAGACTCGTGTTTAAGG-CTTGGAATc--ctttggtgtgtgtcagagtcac-ttgaagagctggtgaagatgtctgatgccaggttccatcccctgagactgactcagtgagtctcaggttgggtccaggagctgtcacttaccaagcccccatgggaactctgatgtTAAGGGACTCAGGGCCAGTGTAGCTTG-CGGTGGC--CAAGACGAG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96318089 304 + 96509753 CAAGGAGAGCAGGCTTTTTCCCTTAGGGCTCT-AACCCTTCGCTCCCGTG--GAGTCTGGGGTGAGTTCTCGTAC-CCTACATG-CCCTGACCCCTGTAAAGTAGACTCGTGTTTAAGG-CTTGGAATc--ctttggtgtgtgtcagagtcac-ttgaagagctggtgaagatgtctgatgccaggttccatcccctgagactgactcagtgagtctcaggttgggtccaggagctgtcacttaccaagcccccatgggaactctgatgtTAAGGGACTCAGGGCCAGTGTAGCTTG-CGGTGGC--CAAGACGAG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16787920 304 - 16982598 CAAGGAGAGCAGGCTTTTTCCCTTAGGGCTCT-AACCCTTCGCTCCCGTG--GAGTCTGGGGTGTGTTCTCGTAC-CCTACATG-CCTTGACCCCTGTAAAGTAGACTCGTGTTTAAGG-CTTGGAATC--cttttgtgtgtgtcagagtcac-ttgaagagctggtgaagatgtctgatgccaggttccatcccctgagactgactcagtgagtctcaggttgggtccaggagctgtcacttaccaagcccccatgggaactctgatgttaagggactcagggccaGTGTAGCTTG-CGGTGGC--CAAGACGAG-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597615 306 - 3785965 CAAGGAGAGCAGGCTTTTTCCCTTAGGGCTCT-AACCCTTCGCTCCCGTGCAGAGTCTGGGGTGTGTTCTAGTAC-CCTACATG-CCCTGACCCCTGTAAAGTAGACTCGTGTTTAAGG-CTTGGAATC--CTTTTGtgtgtgtcagagtcac-ttgaagagctggtgaagatgtctgatgccaggttccatcccctgagactgactcagtgagtctcaggttgggtccaggagctgtcacttaccaagcccccatgggaactctgatgtTAAGGGACTCAGGGCCAGTGTAGCTTG-CGGTGGC--CAAGACGAG-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221593 285 - 90373283 CAAGGAGAGCAGGCTTTTTCCCTTAGGGCTCT-AACCCTTCGCTCCCGTGCAGAGTCTGGGGTGTGTTCTGGTAC-CCTACGTG-CCCTGACCCCTGTAAAGTAGa----------------------c--cttttgtgtgtgtcagagccac-ttgaagagctggtgaagatgtctgatgccaggttccatcccctgagactgactcagtgaatctcaggttgggtccaggagctgtcacttaccaagcccccatgggaactctgatgtTAAGGGACTCAGGGCCAGTGTAGCTTG-CGGTGGC--CAAGACGAG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 123225 306 + 156971 CAAGGAGAGCAGGCTTTTTCCCTTAGGGCTCT-AACCCTTCACTCCCGTGCAGAGTCTGGAGTGTGTTCTAGTAC-CCTACATG-CCCTGACCCCTGTAAAGTAGACTCGTGTTTAAGG-CTTGGAATC--CTTTTGtgtgtgtcagagtcac-ttgaagagctggtgaagatgtctgatgccaggttccatcccctgagactgactcagtgagtctcaggttgggtccaggagctgtcacttaccaagcccccatgggaactctgatgtTAAGGGACTCAGGGCCAGTGTAGCTTG-CAGTGGC--CAAGACGAG-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5473769 306 - 5823884 CAAGGAGAGCAGGCTTTTTCCCGTAGGGCTCT-AACCCTTTGCTCCCGTGCAGAGTCTGGGGTGTGTTCTGGTAC-CCTACATC-CCCTGACCCCTCTAAAGTAGACTCATGTTTAAGG-CTTGGAATC--CTTTTGtgtatgtcagagtcac-ttgaagagctggtgaagatgtctgatgccaggttccatcccctgagactgactcagtgaatctcaggttgggtccaggagctgtcacttaccaagcccccatgggaactctgatgtTAAGGGACTCAGGGCCAGTGTAGCTTG-TGGTGGC--CAAGATGAG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58124614 298 + 159171411 CGAGGAGAGAAGGCTCCTTCTCTTAGGGTTCT-AACCGTTTGCTCCCATGCACAGTCCAGGGTGTGCTCTGGTGC-CCTCCACG-TCCCAACTCCTCCAAAGTAGACCTGTGTTTAGGG-CTTGGaact------tgtgtgtgtcagaatcac-ttgaggtgctggttaagatgtttgaccccaggctccaacccctgagactgactcagtgagtctcaagttgggtccaggaGCTGTC----ACCGAGCTCCTATGGGAACTCTGATGTTAAGGGACTCAGGACCAGTGTAGCTTC-TGGTGGC--CAAGATGAA-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16189650 307 + 16356641 CAAGGAGAGCAGGCTCTTTCCCTCAGGGTTCT-TCCCGTTTGCTCCCATGCAGAGTTCAGGGTGTGCTCTGGTTT-CCTACACA-CCCCAACTCCTCTAAAGTAGACCTGTGTTTAGGG-CTTGGAACTTGTGTGTgtgtgtgtcagaatcac-ttgaggtg-tggttaagatgtttgaccccaggcttcatcccctctgactgactcagtgagtctcaagttgggtccacgagctgtcacttaccaagctcctatggggactctgatgttaagggactcaggaccaGCGTAGCTTC-TGGTGGC--CAAGACGAA-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1050596 304 + 1231380 CCAGGAGAGCAGGCACTTTCCCTCAGGGTTCT-TACTGTTTGCTCCCATGCAGAGTCCAGGGTGTGTTCTGGTTC-CCTACACG-CCCCAACTCCTCTAAAGTAGACCTGTGTTTAGGG-CTTGGaact----tgtgtgtgtgtcagaatcac-ttgaggtgctggttaagatgtttgaccccaggctccatcccctgagactgactcagtgagtctcaagttgggtccaggagctgtcacttaccaagctcctatggggactctgatgttaagggactcaggaccaGTGTAGCTTC-TGGTGGC--CAAGACAAA-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2589927 302 + 11732439 CGAGGAGAGCAGGCTCCTTCCCTTGGGGTTCT-AACCGTTTGCTCCCATGCGGAGTCCAGGGTGTGCTCTGGTAC-CCCACATG-CCCCAACTCCTCTAAAGTAGACCTGTGTTTAGGG-CTTGGaact------tgtgtgtgtcagaatcac-ttgaggtgctggttaagatgtttgaccccaggctccatcccctgagactgactcagtgagtctcaagttgggtccaggagctgtcacttaccaagctcctatgggaactctgatgttaagggactcaggaccaGTGTAGCTTC-TGGTGGC--CAAGATGAA-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22756982 288 + 22939663 GGAGGAAGACAGGTTCTTTCTCTTATTATTCT--ACCCTTTGGTCCTGCACAGAGTCCACTGTGAGCTCCAGTAC-CCTACATG-TCCCAACTATTCCAAAGCAGACCAGTCTTCAAGG-TTTGGAACC--cttttgtgtgtgtcagagtcac-ttgaggagcttgttaaaatgtttgatcccaggctctatcccctgagacagactcagtgggtcttaggttgtgtcc------------------AGCTCCCTGGGGGACTCAGATGTTGAGGGAATCAGAGATGGTGACCCTCATTGGTGGC--CAAAAAGAT-- i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181718044 269 + 182113224 ---AGAAGACAGCATCTCTCTCTCTTGATTCC-TTCCACAAATTCACATTCAG-GTTAGATATGTACTCAGGTACTCTTCCATGCCCCCAACTTTTCCAGGATAGTCCTGTCAT--AGA-ATTGGAACC--TTTTTGTAGATGTCATAATCACATGGGGGAGCTTGTTAAAGT-------CCTAGG-------------------CTCAGTGGACCTTGGGTGTAGTGCAGGATCTGCCATTTAATAAGCTTCTTTGGAGACTCTGGGGTTGAGAGATTCAAAGATGATGACCCTCT-TGGTGGT--C---------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47534585 240 + 47698779 GGAGGAGGACAGGTTCTTTTTCTTGTGATTCCGGGCCCTTTGCTCCCATGTGGAGTCCGATGCATGCTCCACTAC-CCTTCACA-CCC-AGCTTTTCCAGAGTGGACCGGTCTT--GGG-TTTGGAACC--CT--TGTGTGTGCCGGAAGTAC-T------GCTG--------------CGCCCAGCTCCATGCC--------------------CTTGGGCTGGGCCTAGGAACCCTC---CATCTCGCC---------------------AGGGTCTCAGAGTGGGTGTCCCTCA-TGGTGGCAGTAAGAAGGG-- i canFam3.chr24 I 4 C 0 s dasNov3.JH569290 176488 250 - 397369 ---------------CTTCCCCAGGCGGCCCC-GGTCCTGTG-TCCTGC---GATTCCAG--------CTGGC-C-CCCACACA-CTGCCACTCC-CCAAAACAGACCATCCCTCGAGGCCCTGGGCCC--TTCCTGGGCGTGTCAGCG-----TGCAGGTGCCTGGGACAGCGCGGGACCTTGG----------------CAGACAT-GTGAACCCC----TTGGTCCTTGCGTT-----TTAACGACCTCCCTCGGGGCCTCTGACACTGAGCACCCCAGAGCTGACGCCCCTCG-GGGTGAT--CAACGGGGGAG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56776173 302 + 57149010 I a score=9712431.000000 s hg38.chr20_KI270870v1_alt 2676 604 + 183433 CCCCTTGCCCTTTGCTGCCTGGTCCAGCCAGCATGGCCAAGTGAAGCCTTTCTTCTCCC--TCTACTCCGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCCGACACTCTGGTCCTGCTGACGCTGCCCTTCCAGGGCACGGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCGCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTAACTGCCATGAGTGTGGATCGCTATGTAGCCATCTGCCACCCCATCCGTGCCCTCGACGTCCGCACGTCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTCGGTGTTCCCGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-CCCCTCCTCCCCTCACCAGGCTCCC--TGGCTCCCGGGTGGCTCCTCTGGGCCCACGTGCCCTCCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCGTTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTACCCCTCAGGATTACTGGGGCCCGGTGTTTGCc s panTro5.chr20 66304275 604 + 66533130 CCCCTTGCCCTTTGCTGCCTGGTCCAGCCAGCATGGCCAAGTGAAGCCTTTCTTCTCCC--TCTACTCCGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCCGACACTCTGGTCCTGCTGACGCTGCCCTTCCAGGGCACGGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCGCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTATGTAGCCATCTGCCACCCCATCCGTGCCCTCGACGTCCGCACGTCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTGGTCGGTGTTCCCGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-CCCCTCCTCCCCTCACCAGGCTCCC--TGGCTCCCGGGTGGCTCCTCTGGGCCCACGTGCCCTGCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCGTTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCCAGCCCTCAGGACTACTGGGGCCCTGTGTTTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62014959 604 + 62195757 CCCCTTGCCCTTTGCTGCCTGGTCCAGCCAGCATGGCCAAGTGAAGCCTTTCTTCTCCC--TCTACTCCACAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCCGACACTCTGGTCCTGCTGACGCTGCCCTTCCAGGGCACGGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCACTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTATGTAGCCATCTGCCACCCCATCCGTGCCCTCGACGTCCGCACATCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTCGGTGTTCCCGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-CCCCTCCTCCCCTCACCAGGCTCCC--TGGCTCCCGGGTGGCTCCTCTGGGCCCACGTGCCCTGCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCGTTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCCAGCCCTCAGGACTACTGGGGCCCTGTGTTTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 404319 603 - 578057 CCCCTTGCCCTTTGCTGCCTGGTCCAGCCAGCATGGCCAAGTGAAGCCTTTCTTCTCCC--TCTACTCCGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCCGACACTCTGGTCCTGCTGACGCTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCGCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTATGTAGCCATCTGCCA-CCCATCCGTGCCCTCGACGTCCGCACGTCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGTGTTCCTGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-CCCCTCCTCCCCTCACCAGGCTCCG--TGGCTCCCGGGTGGCTCCTCTGGGCCCACGTGCCCTCCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CTGTTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTACCCCTCAGGACTACTGGGGCCCTGTGTTTGCc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109930913 603 - 110113093 CCCCTT-CCCTTTGCTGCCCGGTCCAGCCAGCATGGCCAAGTGAAGCCCTTCTTCTCCC--TCTACTCCACAGGCACACCAAAATGAAGACAGCCACCAACATTTACATCTTTAACCTGGCCCTGGCCGACACTCTGGTCCTGCTGACACTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCCCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTATGTAGCCATCTGCCACCCCATCCGTGCCCTCGACGTCCGCACATCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGCTGTGGGTGTTCCTGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-CCCCTCCTACCCTTACCAGGCTCTG--GGGCTCCTGAGTGGCTCCTCTGGGCCCACTTGCCCTCCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCATTTCTCTCCCCGCAGAGATCGAGTGCCTGGTGGAGATCCCTACCCCTCAGGACTACTGGGGCCCTGTGTTTGCc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92656561 606 - 92844088 CCCCTTGCCCTTTGCTGCCTGGTCCAGCCGGCATAGCCAAGTGAAGCCTTTCTTCTTCC--TCTACTCTGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACGCTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCCCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTACGTAGCCATCTGCCACCCCATCCGCGCCCTCGACGTCCGCACATCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGTGTTCCTGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-CCCCTCCTCCCCTCACCAGGCTCTCCACGGCTCCTGGGTGGCTCCTCTGGGCCCACTTGCCCTCCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCACTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTGCCCCACAGGACTACTGGGGCCCTGTGTTTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96318393 606 + 96509753 CCCCTTGCCCTTTGCTGCCCAGTCCAGCCGGCATAGCCAAGTGAAGCCTTTCTTCTTCC--TCTACTCTGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACGCTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCCCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTACGTAGCCATCTGCCACCCCATCCGCGCCCTCGACGTCCGCACATCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGTGTTCCTGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-CCCCTCCTCCCCTCACCAGGCTCTCCACGGCTCCTGGGTGGCTCCTCTGGGCCCACTTGCCCTCCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCACTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTGCCCCACAGGACTACTGGGGCCCTGTGTTTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16788224 606 - 16982598 CCCCTTGCCCTTTGCTGCCCGGTCCAGCCGGCATAGCCAAGTGAAGCCTTTCTTCTTCC--TCTACTCTGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACGCTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCCCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTACGTAGCCATCTGCCACCCCATCCGCGCCCTCGACGTCCGCACATCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGTGTTCCTGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-CCCCTCCTCCCCTCACCAGGCTCTCCACGGCTCCTGGGTGGCTCCTCTGGGCCCACTTGCCCTCCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCACTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTGCCCCACAGGACTACTGGGGCCCAGTGTTTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3597921 607 - 3785965 CCCCTTGCCCTTTGCTGCTCAGTCCAGCCGGCATAGCCAAGTGAAGCCTTTCTTCTCCC--TCTACTCTGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACACTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCCCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTACGTAGCCATCTGCCACCCCATCCGCGCCCTCGACGTCCGCACATCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGTGTTCCTGTTGCCATCATGGGCTCGGCACAGGTTGAGGATGAAGGTCAGTGGGGTGTCCCCCTCCTCCCCTCACCAGGCTCTCCACGGCTCCTGGGTGGCTCCTCTGGGCCCACTTGCCCTCCACGGCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCACTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTGCCCCACAGGACTACTGGGGCCCCGTGTTTGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90221878 606 - 90373283 CCCCTTGCCCTTTGCTGCCCGGTCCAGCCGGCATAGCCAAGTGAAGCCTTTCTTCTCCC--TCTACTCTGCAGGCATACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACACTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCCCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTCACTGCCATGAGTGTGGATCGCTACGTAGCCATCTGCCACCCCATCCGCGCCCTCGACGTCCGCACATCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGTGTTCCTGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTTAGTGGGGTGT-CCCCTCCTCCCCTCACCAGGCTCTCCACGGCTCCTGGGTGGCTCCTCTGGGCCCACTTGCCCTCCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCACTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTACCCCACAGGACTACTGGGGCCCTGTGTTTGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 123531 606 + 156971 CCCCTTGCCCTTTGCTGCCCGGTCCAGCCGGCATAGCCAAGTGAAGCCTTTCTTCTCCC--TCTACTCTGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACACTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCCCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTACGTAGCCATCTGCCACCCCATCCGCGCCCTCGACGTCCGCACATCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGCGTTCCTGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-CCCCTCCTCCCCTCACCAGGCTCTCCACGGCTCCTGGGTGGCTCCTCTGGGCCCACTTGCCCTCCACGGCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCACTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTGCCCCACAGGACTACTGGGGCCCTGTGTTTGCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5474075 606 - 5823884 CCCCTTGCCCTTTGCTGCCCGGTCCAGCCGGCATAGCCAAGTGAAGCCTTTCTTCTCCC--TCTACTCTGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACACTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCCCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTCACCCTGACTGCCATGAGTGTGGATCGCTACGTAGCCATCTGCCACCCCATCCGCGCCCTCGACGTCCGCACATCCAGCAAAGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGTGTTCCTGTTGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGGTGT-TCCCTCCTCCCCTCACCAGGCTCTCCACGGCTCCTGGGTGGCTCCTCTGGGCCCACTTGCCCTCCACGTCTCCT-GG-GCCCACTCTGACC---------------------------------------------------------------------------CCACTTCTCTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTACCCCACAGGACTACTGGGGCCCTGTGTTTGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58124912 662 + 159171411 CCCCTTGCCCTTTGCTGCCCGGCCCAGCCAGCATGGCCAAGTGAAGCCTTTCTTCTGCC--TCTACTCCGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACACTACCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCATTTGGGAACGCTCTGTGCAAGACAGTTATCGCCATCGACTATTACAATATGTTCACCAGCACCTTCACGCTGACCGCCATGAGTGTGGATCGCTACGTGGCCATCTGCCACCCCATCCGTGCCCTCGATGTCCGCACATCCAGCAAGGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGCGTTCCTGTGGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGGGTGGT-CCCC-CCTCCCCTCAGCAGGCTCCCCGTGGCTCTGTGGCAGC-----------------CCCTCCACATCTCCT-GG-GCCCGTGCTGACCCCGCTTCTTCCCTGAGAGATGGAGTGCCTGGTGGAGGTCCCCACCCCCTCCACATCTCCTGGGCTCATGCTGACTCCGCTTCT-CCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCCGCCCCGCAGGACTACTGGGGCCCTGTGTTTGCC i calJac3.chr5 C 0 M 584 s saiBol1.JH378156 16189957 584 + 16356641 CCCCTTGCCTTTTGCTGCCCGGGTCAGCCA-----GCCAAGTGAAGCCTTTCTTCTGCC--TCTACTCCGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACACTACCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAATGCCCTGTGCAAGACGGTCATTGCCATCGACTACTACAATATGTTCACCAGCACCTTCACGCTGACCGCCATGAGTGTGGATCGCTACGTGGCCATCTGCCACCCCATCCGCGCCCTGGACGTCCGCACGTCCAGCAAGGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGTGTTCCTGTGGCCATCATGGGCTCGGCACAGGTCGAGGATCAAGGTCAGTGGGCGGT-CCCCTCCTCCCCTCACCAGGCTCCCCGTGGCTCTGGGGTGGC-----------------CCCTCCACGTCTCCT-GG-GCCCATGCCGACC---------------------------------------------------------------------------CCGTTTCTGTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTGCCCCGCAGGCCTACTGGGGCCCCGTGTTTGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1050900 587 + 1231380 CTCCTCGCCCTTTGCTGCCTGGCCAAGCCAGCATGGCCAAGTGAAGCCTTTCTTCTGCC--TCTACTCTGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACGCTGCCCTTCCAGGGCACAGACATCCTTCTGGGCTTCTGGCCGTTTGGGAACGCCCTGTGCAAGACCGTCATTGCCATCGACTACTACAACATGTTCACCAGCACCTTCACGCTGACCGCCATGAGTGTGGATCGCTACGTGGCCATCTGCCACCCCATCCGCGCCCTTGACGTCCGCACATCCAGCAAGGCCCAGGCTGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGCATTCCTGTGGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGCGCGGT-CCCCTCCTCCCCTCACCAGGCTTCCCGTGGCTCTGGGGTGAC-----------------CCCTCCACGTCTCCT-GG-GCCCGTGCTGA-----------------------------------------------------------------------------CCGTTTCTGTCCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCTGCCCCGCAGGACTACTGGGGCCCTGTGTTTGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2590229 589 + 11732439 CCCCTTGCCCTTTGCTGCCCGGCCCAGCCAGCGTGGCCAAGTGAAGCTTTTCTTCTGCC--TCTATTCCGCAGGCACACCAAAATGAAGACAGCCACCAATATTTACATCTTTAACCTGGCCCTGGCAGACACTCTGGTCCTGCTGACACTGCCCTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCGTTTGGGAACGCCCTGTGCAAGACAGTCATCGCCATCGACTACTATAACATGTTCACCAGCACCTTCACGCTGACCGCCATGAGTGTGGATCGCTACGTGGCCATCTGCCACCCCATCCGCGCCCTCGATGTCCGCACATCCAGCAAGGCCCAGGCCGTCAATGTGGCCATCTGGGCCCTGGCCTCTGTCGTTGGCGTTCCCGTGGCCATCATGGGCTCGGCACAGGTCGAGGATGAAGGTCAGTGAGCGGT-CCCCTCCTCCCCTCACCAGGCTCCCCGTGGCTCCGGGGTGGC-----------------CCCTCCATGCCTCCT-GG-GCCCGTGCCGACC---------------------------------------------------------------------------CCGTTTCTCTCCCCACAGAGATTGAGTGCCTGGTGGAGATCCCCGCCCCGCAGGACTACTGGGGCCCCGTGTTTGCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56776475 600 + 57149010 CCCCTTGCCCTTTGCTGCCAGGTCCAGCCAGGGTGGCCAAACAAAG-CCCTCTCCTCCC--TGTCCTCTGCAGGCACACCAAGATGAAGACAGCCACCAACATCTACATCTTTAACCTGGCCCTGGCAGACACCCTGGTCTTGCTGACGCTGCCTTTCCAGGGCACAGACATCCTCCTGGGCTTCTGGCCATTTGGGAATGCCCTGTGCAAGACGGTCATTGCCATCGACTACTACAACATGTTCACCAGCACCTTCACGCTGACCGCCATGAGCGTGGACCGCTACGTAGCCATCTGCCACCCCATCCGCGCCCTTGATGTCCGGACGTCCAGCAAAGCCCAGGCCGTGAACGTGGCCATCTGGGCCCTGGCCTCCGTGGTCGGCGTCCCCGTTGCCATCATGGGCTCGGCACAGGTGGAGGACGAAGGTTGGTGGGCGGC-TCC--CCTCCCCGTGCCAGGCTCCCTGTGCTTCCGGGG--GCTCTTCTGAG-CCGCCTGCCCTCCCTGTCTCCTGGG-GCCCGCTCTGACC----------------------------------------------------------------------------CGTCTCTCTTCTTGCAGAGATCGAGTGCCTGGTGGAGATCCCCACCCCGCAGGACTACTGGGGGCCCGTGTTCGCC i micMur3.chr18 I 302 C 0 s otoGar3.GL873542 22757273 593 + 22939663 TCCCTTGCCCTT----------TCATGCCAGGGTGGCCAAATGAAGTCTTTCCTTTCCT--TGTCCTCTGCAGGCACACCAAGATGAAGACAGCTACCAACATTTACATCTTTAACCTGGCCCTGGCAGACACCCTTGTCTTGCTAACACTGCCCTTCCAGGGGACAGACATCCTCCTGGGCTTCTGGCCATTTGGGAATGCTCTGTGCAAGACAGTCATTGCCATTGACTACTACAACATGTTCACCAGCACCTTTACCCTGACCGCCATGAGTGTAGACCGCTATGTAGCCATCTGCCACCCCATCCGTGCCCTCGATGTCCGGACATCCAGCAAGGCCCAGGCTATCAATGTGGCCATCTGGGCCCTGGCCTCTGTTGTTGGTGTTCCTGTTGCCATCATGGGCTCGGCACAGGTTGAAGATGAAGGTTGGTGGGTGGC-CCC-TTCTCCCTGCACCAGGCTGCCTGTGCTTCTGGGG--TCTTCACTGATCCCACCTGCCCTCCC-ATTTCCTGGG-GCCCACTCTTACC---------------------------------------------------------------------------TTGTTTCTCCTCCTGCAGAGATCGAGTGCCTGGTGGAGATCCCCTCCCCACAGGACTACTGGGGCCCTGTGTTTGCT i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181718313 559 + 182113224 --------TTTTTGCGGCCAAGTCTAGACAAAATGGCCAAATGGAGCGTTTCTTCTCCT--TGTCCTCTACAGGCACACCAAGATGAAGACTGCTACCAACATTTACATATTTAATCTGGCACTGGCTGATACCCTGGTCTTGCTGACACTGCCCTTCCAGGGCACAGACATCCTTCTGGGCTTCTGGCCATTTGGGAATGCACTGTGCAAGACGGTCATTGCTATCGACTACTACAACATGTTTACCAGCACTTTCACTTTGACTGCCATGAGTGTAGACCGTTATGTAGCTATCTGCCACCCTATCCGTGCCCTTGATGTTCGGACATCCAGTAAAGCCCAGGCCGTTAATGTGGCCATATGGGCCCTGGCTTCGGTGGTTGGTGTTCCTGTTGCCATCATGGGCTCAGCACAAGTGGAGGATGAAGGTCAGTGGGCAGT-CCTCCTCCCTGACCAATCAGTTCCCCATGGTTCTTG------------------------------------CC-GG-CCCC--TCTGACC---------------------------------------------------------------------------TCATTTCTCT-CCTGCAGAGATCGAGTGCCTGGTGGAGATCCCCGCCCCTCAGGACTATTGGGGCCCTGTATTTGCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47534825 575 + 47698779 --------CCCTGGTGGCCCAGTCCAGCCAGGGGGACCGGGTGAAGCCTTCCCTCTCCCCGTGTTCTCTGCAGACACACCAAGATGAAGACAGCTACCAACATCTACATCTTTAACCTGGCCCTGGCGGACACTTTGGTGCTCCTGACATTGCCCTTCCAGGGCACAGACGTCCTCTTGGGCTTCTGGCCATTTGGGAACGCCCTGTGCAAGACGGTCATTGCCATCGACTACTACAACATGTTCACCAGCACCTTCACGCTGACCGCCATGAGCGTGGACCGCTACGTAGCCATCTGCCACCCCATCCGCGCTCTCGATGTCCGGACGTCCAGCAAGGCCCAGGCTGTCAACGTGGCCATCTGGGCCCTGGCGTCTGTCGTCGGCGTTCCGGTGGCCATCATGGGCTCTGCACAGGTCGAGGACGAAGGTCAGTGGGGGGC-CCCCTTCCCCAGTGCTGCTGTCCCC--CGGACCCCAGACGGTCCCTCCCGGTTCACCTGCCC-------------GG------------CC---------------------------------------------------------------------------CTGCTTGTCTCCCTGCAGAGATCGAGTGTCTGGTGGAGATCCCCACGCCCCAGGACTACTGGGGCCCCGTGTTCGCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 176738 571 - 397369 CCCCCGGCCCTTCGCCGCCAGGCCCACTGGG----GCCACACGAGGCCTTTCCCTCCCT-GTCCGCCCTCCAGACACACCAAGATGAAGACGGCGACCAACATCTACATCTTCAACCTGGCCCTGGCGGACACGCTGGTCCTGCTGACGCTGCCCTTCCAGGGCGCAGACATCCTGCTGGGCTTCTGGCCCTTCGGGAACGCGCTGTGCAAGGCGGTCGTCGCCATTGACTACTACAACATGTTCACCAGCACCTTCACACTGACCGCCATGAGCGTGGACCGCTACGTGGCCATCTGCCACCCCATCCGCGCCCTCGACGTCCGCACGTCCAGTAAAGCGCAGGCTGTCAACGTGGCCATCTGGGCGCTGGCCTCCGTCGTCGGCGTCCCCGTGGCCATCATGGGCTCGGCGCAGGTGGAGGAAGAAGGTCAGTGG------CCCCTcccccc----------------gggctcccgggcggcgtccgtgg---------cccgcc--gccgccc-ggcgcccgcTCACCCC---------------------------------------------------------------------------GCGTGGCTTTCCC-GCAGAGATCGAGTGTCTGGTGGAGATCCCCGCCCCGCAGGACTACTGGGGCCCCGTGTTCGCC i dasNov3.JH569290 C 0 C 0 a score=5628388.000000 s hg38.chr20_KI270870v1_alt 3280 346 + 183433 atctgcatcttcctcttctccttcatcgtccccgtgctcgtcatctCTGTCTGCTACAGCCTCATGATCCGGCGGCTCCGTGGAGTCCGCCTGCTCTCGGGCTCCCGAGAGAAGGACCGGAACCTGCGGCGCATCACTCGGCTGGTGCTGGTGGTAGTGGCTGTGTTCGTGGGCTGCTGGACGCCTGTCCAGGTCTTCGTGCTGGCCCAAGGGCTGGGGGTTCAGCCGAGCAGCGAGACTGCCGTGGCCATTCTGCGCTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTACGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA s panTro5.chr20 66304879 346 + 66533130 GCCTGCATCTTCCTCTTCTCCTTCATCCTACCCGTGCTCGTCATCTCTGTCTGCTACAGCCTCATGATCCGGCGGCTCCGTGGAGTCCGCCTGCTCTCGGGCTCCCGAGAGAAGGACCGGAACCTGCGGCGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTCGTGCTGGTCCAAGGGCTGGGGGTTCAGCCGGGCAGCGAGACTGCGGTGGCCATTCTGCGCTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTACGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62015563 346 + 62195757 GTCTGCATCTTCCTCTTCTCCTTCATCCTACCCGTGCTCGTCATCTCTGTCTGCTACAGCCTCATGATCCGGCGGCTCCGTGGAGTCCGCCTGCTCTCGGGCTCCCGAGAGAAGGACCGGAACCTGCGGCGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTCGTGCTGGTCCAAGGGCTGGGGGTTCAGCCGGGCAGCGAGACTGCGGTGGCCATTCTGCGCTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTACGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 404922 346 - 578057 atctgcatcttcctcttctccttcatcatccccgtactcatcatctCTGTCTGCTACAGCCTCATGATCCGGCGGCTCCGTGGAGTCCGCCTGCTCTCAGGCTCCCGAGAGAAGGACCGGAACCTTCGGCGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTCGTGCTGGTCCAAGGGCTGGGGGTTCAGCCGGGCAGCGAGACTGCGGTGGCCATTCTGCGCTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109931516 346 - 110113093 atctgcatcttcctcttctccttcatcatcCCTGTGCTCATCATCTCTGTCTGCTACAGCCTCATGATCCGGCGGCTCCGTGGAGTCCGCCTGCTCTCAGGCTCCCGAGAGAAGGACCGGAACTTGCGGCACATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTCGTGCTGGTCCAAGGGCTGGGAGTTCAGCCGGGCAGCGAGACTGCCGTGGCCATTCTGCGCTTCTGCACAGCCCTGGGCTACGTCAACAGCTGCCTCAACCCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92657167 346 - 92844088 GtctgcatcttcctcttctccttcatcgtccccgtgctcatcatctccgtctGCTACAGCCTCATGATCCGGAGGCTCCACGGAGTCCGCCTGCTCTCGGGCTCCCGGGAGAAGGACCGGAACCTGCGGCGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTTGTGCTGGTCCAAGGGCTGGGAGTGCAGCCAGGCAGCGAGACTGCCGTGGCCATTCTGCGTTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96318999 346 + 96509753 GtctgcatcttcctcttctccttcatcgtccccgtgctcatcatctccgtctGCTACAGCCTCATGATCCGGAGGCTCCGCGGAGTCCGCCTGCTCTCGGGCTCCCGGGAGAAGGACCGGAACCTGCGGCGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTTGTGCTGGTCCAAGGGCTGGGAGTGCAGCCAGGCAGCGAGACTGCCGTGGCCATTCTGCGTTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16788830 346 - 16982598 GTCTGCATCTTCCTCTTCTCCTTCATTGTCCCCGTGCTCATCATCTCCGTCTGCTACAGCCTCATGATCCGGAGGCTCCGCGGAGTCCGCCTGCTCTCGGGCTCCCGGGAGAAGGACCGGAACCTGCGGCGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTTGTGCTGGTCCAAGGGCTGGGAGTGCAGCCAGGCAGCGAGACTGCCGTGGCCATTCTGCGTTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3598528 346 - 3785965 GtctgcatcttcctcttctccttcatcgtccccgtgctcatcatctccgtctGCTACAGCCTCATGATCCGGAGGCTCCGCGGAGTCCGCCTGCTCTCGGGCTCCCGGGAGAAGGACCGGAACCTGCGACGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTTGTGCTGGTCCAAGGGCTGGGAGTGCAGCCAGGCAGCGAGACTGCCGTGGCCATTCTGCGCTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90222484 346 - 90373283 GtctgcatcttcctcttctccttcatcatccccgtgctcatcatctccgtctGCTACAGCCTCATGATCCGGAGGCTCCGCGGAGTCCGCCTGCTCTCAGGCTCCCGGGAGAAGGACCGGAACTTGCGACGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTTGTGCTGGTCCAAGGGCTGGGAGTGCAGCCAGGCAGCGAGACTGCCGTGGCCATTCTGCGCTTCTGCACAGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 124137 346 + 156971 GtctgcatcttcctcttctccttcatcgtccccgtgctcatcatctccgtctGCTACAGCCTCATGATCCGGAGGCTCCGCGGAGTCCGCCTGCTCTCAGGCTCCCGGGAGAAGGACCGGAACCTGCGACGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTTGTGCTGGTCCAAGGGCTGGGAGTGCAGCCAGGCAGCGAGACTGCCGTGGCCATTCTGCGCTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5474681 346 - 5823884 GtctgcatcttcctcttctccttcatcatccccgtgctcatcatctccgtctGCTACAGCCTCATGATCCGGAGGCTCCGCGGAGTCCGCCTGCTCTCAGGCTCCCGGGAGAAGGACCGGAACTTGCGACGCATCACTCGGCtggtgctggtggtggtggctgtgttcgtgggctgctggACGCCTGTCCAGGTCTTTGTGCTGGTCCAAGGGCTGGGAGTGCAGCCAGGCAGCGAGACTGCCGTGGCCATTCTGCGCTTCTGCACAGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16190541 346 + 16356641 GTCTGCATCTTCCTCTTCTCCTTCATCATCCCCGTGCTCATCATCTCCGTCTGCTACAGCCTCATGATCCGGCGGCTGCGTGGAGTCCGCTTGCTCTCGGGCTCGCGAGAGAAGGACCGGAACTTGCGGCGTATCACTCGGCTGGTGCTGGTGGTGGTGGCTGTGTTCGTGGGCTGCTGGACGCCCGTGCAGGTCTTTGTGCTGGTCCAAGGGCTGGGTGTGCAGCCGGGCAGCGAGACTGCCGTGGCCATCCTGCGCTTCTGCACGGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTACGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1051487 346 + 1231380 GtctgcatcttcctcttctccttcatcatccccgtgctcatcatctccgtctGCTATAGCCTCATGATCCGGCGGCTGCGTGGAGTCCGCCTGCTCTCGGGCTCGCGAGAGAAGGACCGGAACTTGCGGCGTATCACTCGACTGGTGCTGGTGGTGGTGGCTGTGTTCGTCGGCTGCTGGACGCCCGTGCAGGTCTTTGTGCTGGTCCAAGGGCTGGGCGTGCAGCCGGGCAGTGAGACTGCCGTGGCCATTCTGCGCTTCTGCACAGCCCTGGGCTACATCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGATGAGAACTTCAAGGCCTGCTTCCGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2590818 346 + 11732439 GTCTGCATCTTCCTCTTCTCCTTCATCATCCCCGTGCTCATCATCTCCGTGTGCTACAGCCTCATGATCCGGCGGCTGCGTGGAGTCCGCCTGCTCTCGGGCTCGCGAGAGAAGGACCGGAACTTGCGGCGGATCACCCGGCtggtgctggtggtggtggccgtgttcgtgggctgctggACGCCCGTGCAGGTCTTCGTGCTGGTCCAAGGGCTGGGCGTTCAGCCAGGCAGCGAGACTGCCGTGGCCATTCTGCGCTTCTGCACAGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTATGCCTTCCTGGACGAGAACTTCAAGGCCTGCTTCCGCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56777075 346 + 57149010 GtctgcatcttcctcttctccttcatcatccccgtgctcatcatctccgtctGCTACAGCCTCATGATCCGGCGGCTGCGTGGCGTGCGGCTGCTCTCGGGCTCCCGTGAGAAGGACCGGAACCTGCGGCGCATCACGCGGCtggtgctggtggtggtggccgtgtttgtgggctgctggACGCCCGTGCAGGTCTTCGTGCTGGTCCAGGGGCTGGGCGTTCAGCCGGGCAGCGAGACCGCCGTGGCCATTCTGCGTTTCTGCACCGCCCTGGGCTACGTCAACAGCTGCCTCAA-CCCCGTCCTCTACGCCTTCCTGGACGAGAACTTCAAGGCCTGCTTCCGAA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22757866 346 + 22939663 GTCTGCATCTTCCTCTTCTCTTTCATCATCCCCGTGCTCATCATCTCTGTCTGCTACAGCCTCATGATCCGCCGACTCCGTGGCGTGCGCCTGCTCTCAGGCTCCCGCGAGAAGGACCGGAACCTGCGACGCATCACCCGGCTGGTGCTGGTGGTGGTGGCCGTGTTTGTGGGCTGCTGGGCACCTGTCCAGGTCTTTGTGCTGGTGCAGGGCTTGGGTGTTCAGCCAGGCAGCGAGACTGCAGTGGCTGTTCTGCGTTTCTGCACAGCCCTGGGCTATGTCAATAGCTGCCTCAA-CCCTATCCTGTATGCCTTTCTGGATGAGAACTTCAAGGCCTGCTTCCGGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181718872 346 + 182113224 ATCTGCATCTTCCTTTTTTCCTTCATCATCCCGGTTCTGATCATCTCTGTCTGCTACAGCCTCATGATTCGACGACTTCGTGGTGTCCGGCTGCTTTCAGGCTCCCGAGAGAAGGACCGGAACCTGCGACGCATCACACGGCTGGTACTGGTAGTTGTGGCTGTGTTTGTGGGCTGCTGGACACCTGTGCAGGTCTTTGTCCTGGTTCAAGGACTGGGTGTTCAGCCAGGTAGTGAGACTGCAGTAGCCATTCTGCGCTTCTGCACAGCCCTGGGCTATGTCAACAGTTGTCTCAA-TCCCATTCTCTATGCTTTCTTGGATGAGAACTTCAAGGCCTGCTTTAGAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47535400 346 + 47698779 ATCTGCATCTTCCTCTTCTCCTTCATCATTCCCGTGCTCATCATCTCCGTCTGCTACAGCCTCATGATCCGGCGGCTGCGCGGCGTCCGCCTGCTGTCGGGCTCCCGGGAGAAGGACCGGAATCTGCGGCGCATCACGCGGCTGGTGCTGGTGGTGGTGGCCGTGTTCGTGGGCTGCTGGACGCCCGTCCAGGTCTTCGTGCTGGTCCAGGGGCTGGGCGTGCAGCCGGGCAGCGAGACTGCAGTGGCCGTCCTGCGCTTCTGCACCGCCCTCGGCTACGTCAACAGCTGCCTCAA-CCCCATCCTCTACGCCTTCCTCGACGAGAATTTCAAGGCCTGCTTCCGGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 177309 346 - 397369 GTCTGCATATTCCTCTTCTCCTTCGTCATCCCCGTGCTGGTCATCTCCGTCTGCTACAGCCTCATGGTCCGGCGGCTGCGCAGCGTGCGCCTGCTCTCAGGCTCCTGTGAGAAGGACCGTAACCTGCGGCGCATCACGCGCCTGGTGCTGGTGGTGGTGGCAGTGTTCGTCGGCTGCTGGACTCCCGTGCAGGTCTTCGTGCTGGCTCAGGGGCTGGGCGTGCAGCCGGGCAGCCAGGCAGCCGTGGCCGCCCTGCGCTTCTGCACGGCCCTCGGCTACGTCAACAGCTGCCTCAA-CCCCGTCCTCTACGCCTTCCTGGACGAGAACTTCAAGGCCTGCTTCCGCC i dasNov3.JH569290 C 0 C 0 e calJac3.chr5 58125574 584 + 159171411 M a score=132720.000000 s hg38.chr20_KI270870v1_alt 3626 7 + 183433 AGTTCTG s panTro5.chr20 66305225 7 + 66533130 ATTTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62015909 7 + 62195757 AGTTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 405268 7 - 578057 AGTTCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109931862 7 - 110113093 AGTTCTG i nomLeu3.chr13 C 0 M 1308 s rheMac8.chr10 92657513 7 - 92844088 AGTTCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96319345 7 + 96509753 AGTTCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16789176 7 - 16982598 AGTTCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3598874 7 - 3785965 AGTTCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90222830 7 - 90373283 AGTTCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 124483 7 + 156971 AGTTCTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475027 7 - 5823884 AGTTCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58126158 7 + 159171411 AGTTCTG i calJac3.chr5 M 584 C 0 s saiBol1.JH378156 16190887 7 + 16356641 AGTTCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1051833 7 + 1231380 AGTTCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2591164 7 + 11732439 AGTTCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56777421 7 + 57149010 AGTTCTG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22758212 7 + 22939663 AGTTCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181719218 7 + 182113224 AGTTCTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47535746 7 + 47698779 AGTTCTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 177655 7 - 397369 GGTTCTG i dasNov3.JH569290 C 0 C 0 a score=3373794.000000 s hg38.chr20_KI270870v1_alt 3633 219 + 183433 CTGTGCATCTGCCCTGCGCCGGGACGTGCAGGTGTCTGACCGCGTGCGCAGCATTGCCAAGGACGTGGCCCTGGCCTGCAAGACCTCTGAGACGG-TACCGC-GGCCCGCATGACTAGGCGTGGACCTGCCCATGGTGCCTGTCAGCCCGCAGAGCCCATCTACGCCCAACACAGAGCTCACACAGGTCACTGCTCTCTAGGCGGACAC--ACCCTGGGCCCT s panTro5.chr20 66305232 219 + 66533130 CTGTGCATCTGCCCTGCGCCGGGACGTGCAGGTGTCTGACCGCGTGCGCAGCATTGCCAAGGACGTGGCCCTGGCCTGCAAGACCTCCGAGACGG-TACCGC-GGCCCGCATGACTAGGCGTGGACCTGCCCATGGTGCCTGTCAGCCCGCAGAGCCCATCTACGCCCAACACAGAGCTCACACAGGTCACTGCTCTCTAGGCGGACAC--ACCCTGGGCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62015916 219 + 62195757 CTGTGCATCTGCCCTGCGCCGGGACGTGCAGGTGTCTGACCGCGTGCGCAGCATTGCCAAGGACGTGGCCCTGGCCTGCAAGACCTCCGAGACGG-TACCGC-GGCCCGCATGACTAGGCGTGGACCTGCCCATGGTGCCTGTCAGCCCGCAGAGCCCATCTACGCCCAACACAGAGCTCACACAGGTCACTGCTCTCTAGGCGGACAC--ACCCTGGGCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 405275 220 - 578057 CTGTGCATCTGCCCTGCGCCGGGA-GTGCAGGTGTCCGACCGTGTGCGCAGCATTGCCAAGGACGTGGCCCTGGCCTGCAAGACCTCTGAGACGGTTACCGCGGGCCCGCATGACTAGGCGTGGACCTGCCCATGGTGCCTGTCAGCCCGCAGAGCCCATCTACGCCCAACACAGAGCTCACACAGGTCACTGCTCTCTAGGCTGACAC--ACCCTGGGCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92657520 219 - 92844088 CTGTGCCTCTGCCCTGCGCCGGGAGGTGCAGGTGTCCGACCGTGTGCGCAGCATTGCCAAAGATGTGGCCCTGGCCTGCAAGACCTCTGAGACGG-TACCGC-GGCCCGCGTGACTAGGCGTGGACCTGCCTATGGTGCCCGTCAGCCCGCAGAGCCCATCTACGCCCAACACGGAGCTCACACAAGTCACTGCTCTCTAGGCTGACAC--ACCCTGAGCCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96319352 219 + 96509753 CTGTGCCTCTGCCCTGCGCCGGGAGGTGCAGGTGTCCGACCGTGTGCGCAGCATTGCCAAAGATGTGGCCCTGGCCTGCAAGACCTCTGAGACGG-TACCGC-GGCCCGCGTGACTAGGCGTGGACCTGCCTATGGTGCCCGTCAGCCCGCAGAGCCCATCTACGCCCAACACGGAGCTCACACAAGTCACTGCTCTCTAGGCTGACAC--ACCCTGAGCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16789183 219 - 16982598 CTGTGCCTCTGCCCTGCGCCGGGAGGTGCAGGTGTCTGACCGTGTGCGCAGCATTGCCAAAGATGTGGCCCTGGCCTGCAAGACCTCTGAGACGG-TACCGC-GGCCCGCGTGACTAGGCGTGGACCTGCCTATGGTGCCCGTCAGCCCGCAGAGCCCATCTACGCCCAACACGGAGCTCACACAAGTCACTGCTCTCTAGGCTGACAC--ACCCTGAGCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3598881 219 - 3785965 CTGTGCCTCTGCCCTGCGCCGGGAGGTGCAGGTGTCTGACCGTGTGCGCAGCATTGCCAAAGATGTGGCCCTGGCCTGCAAGACCTCTGAGACGG-TACCGC-GGCCCGCGTGACTAGGCGTGGACCTGCCTATGGTGCCCGTCAGCCCGCAGAGCCCATCTACGCCCAACACGGAGCTCACACAAGTCACTGCTCTCTAGGCTGACAC--ACCCTGAGCCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90222837 219 - 90373283 CTGTGCCTCTGCCCTGCGCCGGGAGATGCAGGTGTCTGACCGTGTGCGCAGCATTGCCAAAGACGTGGCCCTGGCCTGCAAGACCTCTGAGACGG-TACCGC-GGCCCGCGTGACTAGGCGTGGACCTGCCTATGGTGCCCGTCAGCCCGCAGAGCCCATCTACTCCCAACACGGAGCTCACACAGGTCACTGCTCTCTAGGCTGACAC--ACCCTGAGCCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 124490 219 + 156971 CTGTGCCTCTGCCCTGCGCCGGGAGGTGCAGGTGTCTGACCGTGTGCGCAGCATTGCCAAAGATGTGGCCCTGGCCTGCAAGACCTCTGAGACGG-TACCGC-GGCCCGCGTGACTAGGCGTGGACCTGCCTATGGTGCCCGTCAGCCCACAGAGCCCATCTACACCCAACACGGAGCTCACACAAGTCACTGCTCTCTAGGCTGACAC--ACCCTGAGCCCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475034 219 - 5823884 CTGTGCCTCTGCCCTGCGCCGGGAGGTACAGGTGTCTGACCGTGTGCGCAGCATTGCCAAAGATGTGGCCCTGGCCTGCAAGACTTCTGAGACGG-TACCGC-GGCCCGCGTGACTAGGCGTGGACCTGCCTATGGTGCCCGTCAGCCCGCAGAGCCCATCTACGCCCAACACGGAGCTCACACAGGTCACTGCTCTCTAGGCTGACAC--ACCCTGAGCCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58126165 219 + 159171411 CTGCGCGTCCGCCCTGCGCCGGGAGATGCAGGTGTCTGCCCTAGTGCGCAGCATTGCCAAGGATGTGGCCCTGGCCTGCAAGACTTCTGAGGCGG-TGCCGC-GGCCCGCATGACTAGGCGTGGACCTGCCCATGGTGCCCGTCAGTCCGCAGAGCCCCTCTACGCCCAACACAGAGCTCACACAGGTCACTGCTCTCTAGGCTGACAC--AACCTGAGCCCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16190894 212 + 16356641 CTGCGCGTCTGCCCTGCGCCGGGAGATGCAGGTGTCTGACCGTGTGCGCAGCATCGCCAAGGACGTGGCCCTGGCCTGCAAGACCTCTGAGGCGG-TGCCGC-GGCCCGCATGACTAGGCGTGGACCTGCCCATGGTGCCCGTCAGCCCACAGAGCCCGTCTACGCCCAACACGGAGCTCACACAGGTCACTGCTCTCTAGGCTGACAC---------GCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1051840 212 + 1231380 CTGCGCCTCCGCCCTGCGCCGGGAGATGCAGGTGTCTGACCGCGTGCGCAGCATCGCCAAGGACGTGGCCCTGGCCTGCAAGACCTCTGAGGCAG-TGCCGC-GGCCCGCATGACTAGGCGTGGACCTGCCCATGGTGCCCGTCAGCCCACAGAGCCCGTCTACGCCCAATACGGAGCTCACACAGGTCACTGCTCTCTAGGCTGACAT---------GCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2591171 218 + 11732439 CTGCGCGTCCGCCCTGCGCCGGGAGATGCAGGTGTCCGACCGCGTGCGCAGCATCGCCAAGGACGTGGCCCTGGCCTGCAAGACCTCCGAGGCGG-TGCCGC-GGCCCGCATGACTAGGCGTGGACCTGCCCATGGTGCCCGTCAGCCCGCAGAGCCCGTCCACGCCCAACACGGAGCTCACACAGGTCACTGCTCTCTAGGCTGACAA---CCCTGAGCCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56777428 219 + 57149010 CTGCGCGTCTGCCCTGCGCCGGGAAACGCAGGTGTCTGACCGCGTGCGCAGCGTTGCCAAGGATGTGGCCCTGGCCTGCAAGACCTCCGAGACTG-TACCGC-GGCCGGCATGACTAGGCGTGGACCTGCCCATGGCGCCTGTCAGCCCACAGAGCCCGTCGACGCCCAACACGGAGCTCACGCAGGTCACTGCCCTCTAGGCTGACGC--AGCCTGAGCCCT i micMur3.chr18 C 0 I 56 s otoGar3.GL873542 22758219 219 + 22939663 CTGTGCGTCTGTCCTTCGGCGGGATGTGCAGATGTCTGACCGTGTGCGCAGCATTGCCAAGGATGTGGCCCTGGCCTGCAAGACCTCTGAGACTG-TCCCAC-GGCCTGCATGACTAGGCGTGGACCTGCCCATGGTGCCTGTCAGCCCGCAGAGCCCATCTACACCCAACACAGAGCTCACCCAGGTTACTGCGCTCTAGGCTGACAC--AATGTGAGCCTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181719225 213 + 182113224 CTGTGCTTCTGCCCTGCACCGGGAGATGCAGGTTTCTGATCGTGTGCGCAGCATTGCCAAGGATGTAGGCCTTGGTTGCAAGACCTCTGAGACAG-TACCAC-GGCCGGCATGACTAGGCGTGGACCTGCCCATGGTGCCTGTCAGTCCACAGAGCCCATCTACACCCAACACGGAGCTCACACAGGTCACTGCTCTCTAGGTTGAC------CCTGAACT-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47535753 221 + 47698779 CTGCGCCCCTGCCCTGCGCCGGGAGATGCAGGTGTCTGACCGCGTGCGCAGCATTGCCAAGGATGTGGCCCTCGCCTGCAAGACCTCTGAGACGG-TGCCGC-GGCCCGCATGACTAGGCGTGGACCTGCCCATGGTGCCCGTCAGCCCGCAGAGCCCGTCAACGCCCAACACGGAGCTCACCCAGGTCACCGCTCTCTAGGCTGACGCCCAACCTGAGTCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 177662 212 - 397369 CTGTGCGTCGGCCCTGCGCCGCGAGGGGCAGGCGTCCGACCGAGTGCGCAGCATTGCCCGGGACGTGGCTCTCGCCTGCAAGACCGCCGAGGCCG-TGCCGC-GGCCGGCGTGACTAGGCGTGGACCTGCCCGCGGCGTCCGTCAGCCCGCAGGGCCCGTCCACGCCCAACACGGAGCTCACGCAGGTCACCGCCGTCTAGGTCG-TGC--------GGCCCT i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 109931869 1308 - 110113093 M a score=749287.000000 s hg38.chr20_KI270870v1_alt 3852 68 + 183433 GAGCATC-CAGAGCCTGGGATGGGCTTTTCCCTGTGGGCCAGGGATGCTCGGTCCCAGAGGAGGAC---------CTA-------- s panTro5.chr20 66305451 68 + 66533130 GAGCATC-CAGAGCCTGGGATGGGCTTTTCTCTGTGGGCCAGGGACGCTCGGTCCCAGAGGAGGAC---------CTA-------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62016135 68 + 62195757 GAGCATC-CAGAGCCTGGGATGGGCTTTTCCCTGTGGGCCAGGGACGCTCGGTCCCAGAGGAGGAC---------CTA-------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 405495 68 - 578057 GAGCATC-CAGAGCCTGGGACGGGCTTTTCCCTGTGGGCCAGGGACGCTCGGTCCCAGAGGAGGAC---------CTA-------- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92657739 68 - 92844088 GAGCATC-CAGAGCCTTGGATGGGCTTTTCCCTGTGGGCCAGGGACACTTGGTCCCAGAGGAGGAC---------CTA-------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96319571 68 + 96509753 GAGCATC-CAGAGCCTTGGATGGGCTTTTCCCTGTGGGCCAGGGACACTTGGTCCCAGAGGAGGAC---------CTA-------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16789402 68 - 16982598 GAGCATC-CAGAGCCTTGGATGGGCTTTTCCCTGTGGGCCAGGGACACTTGGTCCCAGAGGAGGAC---------CTA-------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3599100 68 - 3785965 GAGCATC-CAGAGCCTTGGATGGGCTTTTCCCTGTGGGCCAGGGACACTTGGTCCCAGAGGAGGAC---------CTA-------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90223056 68 - 90373283 GAGCATC-CAGAGCCTTGGATGGGCTTTTCCCTGTGGGCCAGGGACACTTGGTCCCAGAGGAGGAC---------CTA-------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 124709 68 + 156971 GAGCATC-CAGAGCCTTGGATGGGCTTTTCCCTGTGGGCCAGGGACACTTGGTCCCAGAGGAGGAC---------CTA-------- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475253 68 - 5823884 GAGCATC-CAGAGCCTTGGATGGGCTTTTCCCTGTGGGCCAGGGACACTTGGTCCCAGAGGAGGAC---------CTA-------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58126384 68 + 159171411 AAGCACC-CAGAGCCTTGGACGGGCTTTTCCCTGTGGGCCAGGGACACTCGGTCCCAGAGGAGGAC---------CTA-------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16191106 68 + 16356641 GAGCACC-CAGAGCCTTGGACGGGCTTTTCCCTGTGGGCCAGGGATGCTCGGTCCCAGAGGAGGAC---------CTA-------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1052052 68 + 1231380 GAGCACC-CAGAGCCTTGGACGGGCTTTTCCCTGTGGGCCAGGGACACTCGGTCCCAGAGGAGGAC---------CTA-------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2591389 68 + 11732439 GAGCACC-CAGAGCCTTGGACGGGCTTTTCCCTGTGGGCCAGGAATGCTCGGTCCCAGAGGAGGAC---------CTA-------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22758438 67 + 22939663 GAGAACC-CAGAGCCTTGAATGAGC-TTTCCCTTTAGCCCAGAGATGCTCGGTCCCAGAGGAGGAC---------CTA-------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181719438 65 + 182113224 GAGCGTC-TGGGGCCTTGAATGG--CTTTTCTTTTGGTTCAG-GATGCTCAGTCCTAGAGGAAGAC---------CTT-------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47535974 45 + 47698779 GAGTATTGCAGGCTCGTGGAC------TTCACTGTGGCCCCAGGGGGCCTG----------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 177874 81 - 397369 --GCGCC-CGGAGCCTCTGCTGGGC-TTTCTCTTCAACCCGGACGCGC-CGACCCCGGAGGAGGCCGGCAGGGAACTGGAAATCGA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56777647 56 + 57149010 I e nomLeu3.chr13 109931869 1308 - 110113093 M a score=756071.000000 s hg38.chr20_KI270870v1_alt 3920 63 + 183433 GTGACATCATGGGACAGGTCAAAGCATTAGGGCCACCTCCATGGCCCCAGACAGACTAAAGCT s panTro5.chr20 66305519 63 + 66533130 GTGACATCATGGGACAGGTCAAAGCATTAGGGCCACCTCCATGGCCCCAGACAGACTAAAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62016203 63 + 62195757 GTGACATCATGGGACAGGTCAAAGCATTAGGGCCACCTCCATGGCCCCAGACAGACTAAAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 405563 63 - 578057 GTGACATCATGGGACAGGTCAAAGCATTAGGGCCACCTCCAAGGCCCCAGACAGACTAAAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92657807 63 - 92844088 GTGACATCATGGGACAGGTCAGAGCGTTAGGGCTACCTCCGTGGCCCCAGACAGACTAAAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96319639 63 + 96509753 GTGACATCATGGGACAGGTCAGAGCGTTAGGGCTACCTCCGTGGCCCCAGACAGACTAAAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16789470 63 - 16982598 GTGACATCATGGGACAGGTCAGAACGTTAGGGCTACCTCCGTGGCCCCAGACAGACTAAAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3599168 63 - 3785965 GTGATATCATGGGACAGGTCAGAGCATTAGGGCTACCTCCATGGCCCCAGACAGACTAAAGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90223124 63 - 90373283 GTGACATCATGGGACAGGTCAGAGCATTAGGGCTACCTCCATGGCCCCAGACAGACTAAAGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 124777 63 + 156971 GTGATATCATGGGACAGGTCAGAGCATTAGGGCTACCTCCATGGCCCCAGACAGACTAAAGCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475321 63 - 5823884 GTGACATCATGGGACAGGTCAGAGCATTAGGGCTACCTCCATGGCCCCAGACAGACTAAAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58126452 63 + 159171411 GCGACATCTTGGGACAGGTCAGAGCATCAGGGCTACCTCCAAGGTCCTGGACACACTGAAGCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16191174 63 + 16356641 GTGACATTGTGGGACAGGTCAGAGCATCAGGGCTACCTCCGAGGTCCCGGACACACTGAAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1052120 63 + 1231380 GTGACACCGTGGGACAGGTCAGAGCATCAGTGCTACCTCCAAGGTCCCGGACACACTGAAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2591457 63 + 11732439 GCGACATCGTGGGACAGGTCAGAGCGTCAGGGCTACCTCCAAGGTCCCGGACACACTGAAGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56777703 63 + 57149010 GTGACATCACGGGACAGGCCACAGCATGAGGGCTGCCTCCGCGGCCCCGGTCAGATTAAAGCT i micMur3.chr18 I 56 I 264 s otoGar3.GL873542 22758505 62 + 22939663 GTGACATCATGGGATAGGTCACAGCATGAAGGCTACCTCTGT-GCCCCAGTTAGATTAAAGCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181719503 62 + 182113224 TTAGCACCATGGGACAGGTCAAAGCATCAAGGTGGCCTCCATGGCCTCTGTCAGATTAAGTT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47536019 31 + 47698779 GTGACATCATGGGACAGGTC--------------------------------GGACTAAAGCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 177955 56 - 397369 GTGACCTCCTGGGGCAGGACGATGTATCACAGCTGCCGCCGTGGCC------AAACTAAGCG- i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 109931869 1308 - 110113093 M a score=2021036.000000 s hg38.chr20_KI270870v1_alt 3983 260 + 183433 GCCCTCCTGGTGCAGGGCC-GAG-GGGACACA-AGGACCTACCTGGAAGCAGC------TGACAT--GCTGGTGGACGGCCGTGACTG--GAGCCCGTGCC-CCTCCCTCCCCGTGCTTCATGTGAC----T-CT----TGGCCTCTCTGC-TG--CTGCGTTGGCAGAACCCTGGGTGGGCAGGCACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCAG--CTGT-GTCA-TC----CTGTGCC--CCCCATGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGTGAC-----GTCTC s panTro5.chr20 66305582 260 + 66533130 GCCCTCCTGGTGCAGGGCT-GAG-GGGACACA-AGGACCTACCTGGAAGCAGC------TGACAT--GCTGGTGGACGGCCGTGACTG--GAGCCCATGCC-CCTCCCTCCCCGCGCTTCATTTGAC----T-CT----TGGCCTCTCTGC-TG--CTGCGTTGGCAGAACCCTGGGTGGGCAGGCACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCAG--CTGT-GTCA-TC----CTGTGCC--CCCCATGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGTGAC-----GTCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62016266 260 + 62195757 GCCCTCCTGGTGCAGGGCT-GAG-GGGACACA-AGGACTTACCTGGAAGCAGC------TGACAT--GCTGGTGGACGGCCGTGACTG--GAGCCCGTGCC-CCTCCCTCCCCGCACTTCATGTGAC----T-CT----TGGCCTCTCTGC-TG--CTGCGTTGGCAGAACCCTGGGTGGGCAGGCACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCAG--CTGT-GTCA-TC----CTGTGCC--CCCCATGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAACTGCCTTCAGCCCTGTGAC-----GTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 405626 259 - 578057 GCCCTCCTGGTGCAGGGCC-GAG-GGGACACA-AGGACCTACCTGGAAGCAGC------TGACAT--GCTGGTGGACGGCCGTGACTG--GAGCCTGTGCC-CCTCCCT-CCCGCGCTTCATGTGAC----T-CT----TGGCCTCTCTGC-TG--CTGCGTTGGCAGAACTCTGGGTGGGCACGCACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCAG--CTGT-GTCA-TC----CTGTGCC--CCTCATGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGTGAC-----GTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92657870 258 - 92844088 GCCCGCCTGGTGCATGGCT-GAG-GTGACACA-AAGACCTACCTGGAAGCAGC------TGCCGT--GCTGCTGGACGGCCGCGACTG--GAGCCCGTGCC-CCTCCCTGCCCGTGCTTCACGTGAC----T-CT----TGGCCTCTCTGC-TG--CTGTGTTGGCAGAACCCTGGGTGGGCG--CACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCGG--CTGT-GTCG-TC----CTGTGCA--CCCTACGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGGGAC-----GTCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96319702 258 + 96509753 GCCCGCCTGGTGCATGGCT-GAG-GTGACACA-AAGACCTACCTGGAAGCAGC------TGCCGT--GCTGCTGGACGGCCGCGACTG--GAGCCCGTGCC-CCTCCCTGCCCGTGCTTCACGTGAC----T-CT----TGGCCTCTCTGC-TG--CTGTGTTGGCAGAACCCTGGGTGGGCG--CACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCGG--CTGT-GTCG-TC----CTGTGCA--CCCTACGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGGGAC-----GTCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16789533 258 - 16982598 GCCCGCCTGGTGCATGGCT-GAG-GTGACACA-AAGACCCACCTGGAAGCAGC------TGCCGT--GCTGCTAGACGGCCGCGACTG--GAGCCCGTGCC-CCTCCCTGCCCGTGCTTCACGTGAC----T-CT----TGGCCTCTCTGC-TG--CTGTGTTGGCAGAACCCTGGGTGGGCG--CACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCGG--CTGT-GTCG-TC----CTGTGCA--CCCTACGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGGGAC-----GTCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3599231 258 - 3785965 GCCCACCTGGTGCAGGGCT-GAG-GTGACACA-AAGACCTACCTGGAAGCAGC------TGCCGT--GCTGCTGGACGGCCGCGACTG--GAGCCCGTGCC-CCTCCCTGCCCATGCTTCACGTGAC----T-CT----TGGCCTCTCTGC-TG--CTGTGTTGGCAGAACCCTGGGTGGGTG--CACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCGG--CTGT-GTCG-TC----CTGTGCA--CCCTACGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGGGAC-----GTCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90223187 260 - 90373283 GCCCGCCTGGTGCAGGGTT-GAG-GTGACACA-AAGACCTACCTGGAAGCAGC------TGCCGT--GCTGCTGGGCGGCCGTGACTG--GAGCCCGTGCC-CCTCCCTGCCTGTGCTTCACGTGAC----T-CT----TGACCTCTCTGC-TG--CTGTGTTGGCAGAACCCTGGGTGGGCGCACACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GTGG--CTGT-GTCA-TC----CTGTGCA--CCCTACGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGGGAC-----GTCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 124840 258 + 156971 GCCCGTCTGGTGCAGGGCT-GAG-GTGACACA-AAGACCTACCTGGAAGCAGC------TGCCGT--GCTGCTGGACGGCCACGACTG--GAGCCCGTGCC-CCTCCCTGCCCGTGCTTCACGTGAC----T-CT----TGGCCTCTCTGC-TG--CTGTGTTGGCAGAACCCTGGGTGGGCG--CACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCGG--CTAT-GTTG-TC----CTGTGCA--CCCTACGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGGGAT-----GTCTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475384 260 - 5823884 GCCCTCCTGGTGCAGGGCT-GAG-GTGACACA-AAGACCTACCTGGAAGCAGC------TGCCGT--GCTGCTGGATGGCCGTGACTG--GAGCCTGTGCC-CCTCCCTGCCTGTGCTTCACGTGAC----T-CT----TGGCCTCTCTGC-TG--CTGTGTTGGCAGAACCCTGGGTGGGCGCACACCCGGA-------------------------------------------------------------------------------GGAGGAGCA---GCGG--CTGT-GTCA-TC----CTGTGCA--CCCTACGTGCTGTGTGCTGTTTGCATGG-CAGGGCTCCAGCTGCCTTCAGCCCTGGGAC-----GTCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58126515 249 + 159171411 GCCCTCCTTGTGCAGGGCT-GCA-GAGACACA-AGGACCTACCTGGAAGCGTC------TGCTAT--GCTGGTGGACGGCCCTGACTG--GCGCCCGTGCC-CC-------CCACGTCTCCTGTTAC----T-CT----TGGCCGCTCTGC-TG--CTGTGTTGGCAGAACCCTGGATGAGCATGCA-CCTGA-------------------------------------------------------------------------------GAAGCCGCA---GCAG--C--T-GTCA-TC----GTGCGCA--CCCCACGTGCTGTGT-CCGTGTGTATGG-CAGGATTCCAGCTGGCTTCAGTCCTGTGGC-----ATCTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16191237 234 + 16356641 GCCCTCCTGGTGCAGGGCT-GCA-GGGACACA-GGGACCTGCCTGGAAGCATC------TGCTGT--GCCGGTGGACGGCCCCGACTG--GTGCCCAAGCC-CC----------CACCTCCCGTGAC----T-CT----TGGCCGCTCTGC-TG--CTGTGTTGGCAGAACCCTGGGTGAGCACGCA-CCGGA-------------------------------------------------------------------------------GGAGCCACA---GCAG--CTGT-GTCA-TC----GTGTGCA--CCCCACGTGCTGTGTGCTGTGTGCATGG-CAGGACTCCAGC---------------GGC-----GTCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1052183 230 + 1231380 GCGCTCCTGGTGCAGGGCT-GCA-GGGACACA-AGGACCTACCTGGAAGCATC------TGCTGT--GCCGGTGGACAGCCCCGACTG--GCGCCCAAGCC-CC-------CCATGCCTCCCGTGAT----G-CT----TGGCCGCTCTGT-TG--CTGTGTTGGCAGAACCCTGGGTGAGCACGCA-CTGGA-------------------------------------------------------------------------------GGAGCCGCA---GCAG--CTGT-GTCA-TT----GTGCACA--CCCCATGTGCTGTGT-------GCATGG-CAGGGCTCCAGC---------------AGC-----GTCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2591520 331 + 11732439 GCCCTCCTGGTGCACGGCT-GCA-GGGACACA-AGGACCTACCTGGAAGCATC------TGCTGT--GCCGGTGGATGGCCCTGACTG--GCGCCCGTGCC-CC-------CCACGCCTGCTGTGAC----T-CT----TGGCTGCTCTGG-GG--CTGTGTTGGCAGAACCCTGGGTGAGCACGCA-CTGGACGGCCCTGACTGGCGCCTGTGCCCCCCACGCCTCCTGTGACTCTTGGCTGCTCTGGGGCTGTGTTGGCAGAACCCTGGGTGAGCCGCA---GCAG--CTGT-GTCA-TC----GTGCGCA--CCCCACGTGTTGTGTGCTGTGTGCATGG-CAGGACTCCAGCTGCCTTCAGCCCTGCAGC-----GTCTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22758567 258 + 22939663 GCCTTCCCAGTGTAGGGCT-TAGAGGGACATA-GGACTTCACCTGGAAGCATCCACTGATGCCATGAGCTGGTGGCATGTC-TGACTG--GATCTTGCACA-CTTGCT--CCCACACTTCCAGAGAC----TCCT----TGGCCCCTGTGTGTG--CTGTGTCTGAGGAGCCCCATGT-------CTTCTGAT-------------------------------------------------------------------------------GGTGCTACAGGTGTGA--CTGTAGCCA-TG----CAG--------CCATGTGTTGGGCACTGT-TGTATAG-CAAGTTTCCCACTGCCCTCAGCCTGGTGGT-----ATCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181719565 231 + 182113224 TCCTCCCTGGTATAGGACCAGAG-AGAACCAA-AGGAACTGCATGGAAACATC------CACAAC--TCAG-----TGGACATGCCTGGTGAACCCATG-----TAGGTATTCATGGTTCACTTGAC----T-CTTCTCTGGTTTCTCC-C-TG--CTGCCCTGG-----TTCTAGGTGGGCT--CAGCCTGA-------------------------------------------------------------------------------GGTATTGTA---GTTG--TCAT-GTAG-TCACTATTGTGA-----CTACCTGTTGTGTGCTAT---------------------TGCCCTCAGCCTTTCAGT-----GTTTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47536050 213 + 47698779 GCCCTCCTGGTACGGAGCA-GAG-AGGGGACACAGGACCCACGAGCCAGCATG--------------GCTGG-------------CCG--CAGCCCAGGCCGCCTTCCACCCCATG------GACGC----T-TC----TGGCCTCTCCCC-TG--CTGTACCCTGTGTGCTCTTGGTGTCCC-ACACCTGGG-------------------------------------------------------------------------------GGTGTAGCC---ACAG--C-GT-GCCAGGC----CTGTGCC--CTT----TGCTGTGTGCTGGCTGCATGG--------------------AGCCGGGCGGC-----CCCTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178011 249 - 397369 GCTCCCCTGGTGTGGGCCG-GGG-ATGGCG---AGGAC---------ACTGTC------TGCCTT--GCCGGTGAGCA--CGCTGCCA--GGACCTGCGCA---GACATCCTCATGCTTCAAGGGACACTTT-CT----TGGCCTCTCCCT-TGAACCGGACGCTTGAACCTCAAGGCGGGCT-----------------------------------------------------------------------------------------GGAGCCGGA---GTTGTCCCGC-GCAG-CC----GTGTGCAGCCCCCTTGGGCAGAGAGCTGTTTGCAAGGCCAGGGCCCCCACT--CTCCAACCCTTTGGCTCTCGGTCTC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56777766 264 + 57149010 I e nomLeu3.chr13 109931869 1308 - 110113093 M a score=920788.000000 s hg38.chr20_KI270870v1_alt 4243 96 + 183433 CTCAGGGCAGCTGGACAGGCTTGGCACTGCCCGG-GAAGTGCAGCA-GGCAGCTTTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCTGCCACCTG s panTro5.chr20 66305842 96 + 66533130 CTCAGGGCAGCTGGACAGGCTTGGCGCTGCCCGG-GAAGTGCAGCA-GGCAGCTTTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCTGCCACCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62016526 96 + 62195757 CTCAGGGCAGCTGGACAGGCTTGGCGCTGCCCGG-GAAGTGCAGCA-GGCAGCTTTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCTGCCACCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 405885 96 - 578057 CTCAGGGCAGCTGGACATGTTTGGCACTGCCCGG-GAAGTGCAGCA-GGCAGCTTTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCTGCCACCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92658128 90 - 92844088 CTCATG------GGACAGACTTGGCGCTGCCCGG-GAAGTCCAACA-GGCAGCATTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCCGCCACCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96319960 96 + 96509753 CTCAGGGCAGCGGGACAGACTTGGCGCTGCCCGG-GAAGTCCAACA-GGCAGCATTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCCGCCACCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16789791 96 - 16982598 CTCAGGGCAGCTGGACAGACTTGGCGCTGCCCGG-GAAGTCCAACA-GGCAGCATTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCCGCCACCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3599489 96 - 3785965 CTCAGGGCAGCTGGACAGGCTTGGCGCTGCCCGG-GAAGTCCAACA-GGCAGCATTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCTGCCACCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90223447 96 - 90373283 CTCAGGGCAGCTGGACAGGCTTGGCGCTGCCCGG-GAAGCCCAACA-GGCAGCATTTCTTT-GGGGTGGGGCTTGCCCTGAGCTTGGAGCTGCCACCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 125098 96 + 156971 CTCAGGGCAGCTGGACAGGCTTGGCGCTGCCCGG-GAAGTCCAACA-GGCAGCATTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCCGCCACCAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475644 96 - 5823884 CTCGGGGCAGCTGGACAGGCTTGGCGCTGCCCGG-GAAGTCCAACA-GGCAGCTTTTCTTT-GGGGTGGGACTTGCCCTGAGCTTGGAGCTGCCACCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58126764 97 + 159171411 CTCAGGGCAGTTGCACAGGCTTGGCACCACCCCGTTAAGTGCAGCA-GGCAGCTTTTCTGT-GGGGTGGGACTTGCCCTGAGCTTGGAGCTGTCACCTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16191471 96 + 16356641 CTCAGGGCAGCTGGACAGGCTTGGCGCCGCCACA-TACGTGCAGCA-GGCAGCTCTTCCGT-GGGGTGGGACTTGCCCTGAGCTTGGAGCTGCCACCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1052413 97 + 1231380 CTCAGGGCAGCTGGACAGGCTTGGCGCCTCCCCG-TAAGTGCAGCAGGGCAGCTCTTCTGT-TGGGTGGGACTTGCCCTGAGCTTGGAGCTGCCACCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2591851 96 + 11732439 CTCAGGGCAGCTGGACAGGCTTGGCGCCGCCCCG-TAAGTGCAGCG-GGCAGCTTTCCTGT-GGGGTGGCACTTGCCCTGAGCTTGGAGCTGCCATCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56778030 95 + 57149010 CTCAGGGCAGCTG-ACAGGCTTGGCGCCGCCCAG-GACGTGCGTCG-GGCAGCGTTTCTTT-GGGGTGGGACTTGCCCTGAGGTTGGAGCTGCCACCTG i micMur3.chr18 I 264 I 388 s otoGar3.GL873542 22758825 96 + 22939663 TTCAGGGTAGCTGAATGGGCATGGTGCTGCCCAG-GAAGCGAGT-G-GGCAGCTATTCTTTGGGGGTGGGCCTGGCTCTGAGATCAGAGCTGCCAACTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181719796 57 + 182113224 CACAGAACTGGTGATCATACCCAGTGTTGCCTGG----------------------CCCTT-AAGCTTGGAGTTGCCTTG------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47536263 76 + 47698779 CTCGGGGCAGCGGGACGAGCTTGGAGCTGTC-GA-GATCGCTGGCA-GGCA-----TCTGC-GGGCAG---------CCGGGCTTGACGCTGCG----- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178260 28 - 397369 ----------------------------------------------------------------CGCGGGGCCAGCCCTGAGCG-GGAGCTGC------ i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 109931869 1308 - 110113093 M a score=1312746.000000 s hg38.chr20_KI270870v1_alt 4339 172 + 183433 GAGGACTTGCCTGTTCCGACTCCACCTGTGCAGCCGGGGCCACCCCAGGAGAAAGTGTCCA--GGTGGGGGCTGGCAGTCCCTGGCTGCAGACCCCGAGCTGGCCCTGGGCCAGCCGCACCTCTGAAGGTTTTCTGTGTGCTGCACGGTG-------------------CAGGCCTCATCCCTG------ACTGCAGCT s panTro5.chr20 66305938 168 + 66533130 GAGGACTTGCCTGTTCTGACTCCACCTGTGCAGCCGGGGCCACCCCAGGAGA--GTGTCCA--GGTGGG--CTGGCAGTCCCTGGCTGCAGACCCCGAGCTGGCCCTGGGCCAGCCGCACCTCTGAAGGTTTTCTGTGTGCTGCACTGTG-------------------CAGGCCTCATCCCTG------ACTGCAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62016622 168 + 62195757 GAGGACTTGCCTGTTCTGACTCCACCTGTGCAGCCGGGGCCACCCCAGGAGA--GTGTCCA--GGTGGG--CTGGCAGTCCCTGGCTGCAGACCCCGAGCTGGCCCTGGGCCAGCCGCACCTCTGAAGGTTTTCTGTGTGCTGCACTGTG-------------------CAGGCCTCATCCCTG------ACTGCAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 405981 170 - 578057 AAGGACTTGCCTGTTCCGACTCCACCTGTGCAGCCGGGGCCACCCCAGGAGAAAGTGTCCA--GGTGGG--CTGGCAGTCCCTGGCTGCAGACCCCGAGCTGGCCCTGGGCCAGCTGCACCTCTGAAGGTTTTCTGTGTGCTGCACTGTG-------------------CAGGCCTCATCCCTG------ACTGCAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92658218 167 - 92844088 GAGGACTCGCCCGTTCTGACTCCACCTGTGCAGCCAGGGCCACCCCAGGAGA--GTGTCCA--GGTGGG--CTGGCTGTCCCTGGCTGCAGACCCCGAGCTGGTCCTGGGCCAGCCGCACCTCTGAAGGTTTCCTGTGTGCTGTGCTGTG-------------------CAGGCCTCATCCCTG------ACTG-AGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320056 167 + 96509753 GAGGACTCGCCCGTTCTGACTCCACCTGTGCAGCCAGGGCCACCCCAGGAGA--GTGTCCA--GGTGGG--CTGGCTGTCCCTGGCTGCAGACCCCGAGCTGGTCCTGGGCCAGCCGCACCTCTGAAGGTTTCCTGTGTGCTGCGCTGTG-------------------CAGGCCTCATCCCTG------ACTG-AGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16789887 167 - 16982598 GAGGACTCGCCCGTTCTGACTCCACCTGTGCAGCCAGGGCCACCCCAGGAGA--GTGTCCA--GGTGGG--CTGGCTGTCCCTGGCTGCAGACCCCGAGCTGGTCCTGGGCCAGCCGCACCTCTGAAGGTTTCCTGTGTGCTGCACTGTG-------------------CAGGCCTCATCCCTG------ACTG-AGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3599585 167 - 3785965 GAGGACTTGCCCGTTCTGACTCCACCTGTGCAGCCAGGGCCACCCCAGGAGA--GTGTCCA--GGTGGG--CTGGCTGTCCCTGGCTGCAGACCCCGAGCTGGTCCTGGGCCAGCCGCACCTCTGAAGGTTTCCTGTGTGCTGCACTGTG-------------------CAGGCGTCATCCCTG------ACTG-AGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90223543 167 - 90373283 GAGGACTTGCCTGTTCTGACTCCACCTGTGCAGCCAGGGCCACCCCAGGAGA--GTGTCCA--GGTGGG--CTGGCTGTCCCTGGCTGCAGACCCCGAGCTGGTCCTGGGCCAGCCGCACCTCTGAAGGTTTCCTGTGTGCTGCACTGTG-------------------CAGGCCTCATCCCTG------ACTG-AGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 125194 167 + 156971 GAGGACTTGCCCGTTCTGACTCCACCTGTGCAGCCAGGGCCACCCCAGGAGA--GTGTCCA--GATGGG--CTGGCTGTCCCTGGCTGCAGACCCCGAGCTGGTCCTGGGCCAGCCGCACCTCTGAAGGTTTCCTGTGTGCTGCACTGTG-------------------CAGGCGTCATCCCTG------ACTG-AGCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475740 167 - 5823884 GAGGACTTGCTTGTTCTGACTCCACCTGTGCAGCCA-GACCACCCCAGGAGA--GTGTCCA--GGTGGG--CTGGCCGTCCTTGGCTGCAGACCCCGAGCTGGTCCTGGGCCAGCCACACCTCTGAAGGTTTCCTGTGTGCTGCACGGTG-------------------CAGGCCTCATCCCTG------ACTGCAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58126861 169 + 159171411 GAGGACTTGC-TGTTCTGACTGCAGCCATGCAACCAGGGTCACCCCAAGGGGGAGCGTCCA--GGTGGA--CTGTCAGTCCCTGGCTGCAGACGCTGAGATGGGCCTGGGCCAGCCACGCCTCCGAAGGTTTCCTGTGTGCTGCCCTGTG-------------------CAGTCTTCATCTCTG------ACTGCCCCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16191567 169 + 16356641 GAGGACTTGC-TGTTCTGACTGCGGCTGTGCAGCCAGGGTCACCCCAGGAGGGAGTGTCCC--GGTGGA--CTGTCAGTCCCTGGCTGCAGACGCGGAGCTGGGCCTGGGCCAGCCACACCTCTGAAGGTTTTCTGTGTGCCGCCCTGTG-------------------CAGGCCTCATCCCTG------CCTGCAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1052510 169 + 1231380 GAGGACTTGC-TGTTCTGACTGCAGCTGTGCAGCCAGGGTCACCCCAGGAGGGAGTGTCCC--GGTGGA--CTGCCAGTCACTGGCTGTAGACACTGAGCTGGGCCTGGGCCAGCCGCACCTCTGAAGGTTTTCTGTGTGCTGCCCCATG-------------------CAGGCCTCATCCCTG------ACTGCAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2591947 169 + 11732439 GAGGACTTGC-TGTTCTGACTGCAGCTGTGCAGCCAGGGTCACCCCAGGAGGGAGTGTCCA--GGTGGA--CTGTCTGTCCCTGGCTGCAGATGCTGAGCTGGGCCTGGGCCAGCCGCACCTCCGAAGGTTTTCTGTGCGCCGCCCCGTG-------------------CAGGCCTCCTCCCTG------ACTGCAGCT i aotNan1.NW_018500483v1 C 0 I 45 s otoGar3.GL873542 22758921 164 + 22939663 GAGCACCCAGCTGTTCTGACCCCACCTGTGTAGCCAGGTTACCTGCAGAGGG--GTGTT----GGGTGG--CTGCCTGCCCCTGCCTGGAGGCCCTGAGTGGGTCCTTGT---GACATACCACAGA-----TTGTGGGTATGGATGCGCC-------------------TGTGCCTCAGCACTGCTGACACTTGTGGCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181719853 152 + 182113224 GAGCATCT---AGTTCTGACTCCACTGATGCATTCA-GATTACCTGAGGTGG--GTGAGCATCAGTGGG---------TTCTTGGATG----------ACTGTTTC----------------CTGACGATTCTTTTCATGCTGTACTATGGAGTATATGAAGGGGACTTCACACTTCATCTGGT------ACTGCCACT i mm10.chr2 C 0 I 2 s canFam3.chr24 47536339 73 + 47698779 ------------------------------GAGCCGGGCCTGCCT-----GG--GCCTCCA-----CCG--CTGTCACTCCTCGTCC-----------------------CCGCTCTCGCTTCTGAGAGGTTCCTCCGTG----------------------------------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178288 104 - 397369 -------TGCCTGTCTGGAGTGCGCT----------GGACCCTGGCAGGGGA-------CC--GGTGGC--TCGTGGGCC------TGCAGGCAGCATGTGGCGCTGCTGCTGCTTGCTCCTCC------TTCCTG---------CCGCG-------------------GAG--------------------------- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56778125 388 + 57149010 I e nomLeu3.chr13 109931869 1308 - 110113093 M a score=528733.000000 s hg38.chr20_KI270870v1_alt 4511 75 + 183433 TGACTCTGGGCCCAACC----CCCATTTC-CCTTCAGGAGACCAGCGAGAGG----------------CCCT--GGCCCATTCCCTCCAGCGGTGCAA s panTro5.chr20 66306106 75 + 66533130 TGACTCTGGGCCCAACC----CCCATTTC-CCTTCAGGAGACCAACGAGAGG----------------CCCT--GGCCCATTCCCTCCAGCGGTGCAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62016790 75 + 62195757 TGACTCTGGGCCCAACC----CCCATTTC-CCTTCAGGAGACCAACGAGAGG----------------CCCT--GGCCCATTCCCTCCAGCGGTGCAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 406151 75 - 578057 TGACTCTGGGCCCAACC----CCCATTTC-CCTTCAGGAGACCAACGAGAGG----------------CCCT--GGCCCATTCCCTCCAGTGGTGCAA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92658385 75 - 92844088 TGGCTCTGGGTCCAACC----CCCCTTTC-CCTTCAGGAGACCCACAGGAGG----------------CCCC--GGCCCATTCCCTCCAGCAGTGCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320223 75 + 96509753 TGGCTCTGGGTCCAACC----CCCCTTTC-CCTTCAGGAGACCCACGGGAGG----------------CCCC--GGCCCATTCCCTCCAGCAGTGCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16790054 75 - 16982598 TGGCTCTGGGTCCAACC----CCCCTTTC-CCTTCAGGAGACCCACGGGAGG----------------CCCT--GGCCCATTCCCTCCAGCAGTGCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3599752 75 - 3785965 TGGCTCTGGGTCCAACC----CCCCTTTC-CCTTCAGGAAACCCACGGGAGG----------------GCCT--GGCCCATTCCCTCCAGCAGTGCAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90223710 75 - 90373283 TGGCTCTGGGTCCAACC----CCCATTTC-CCTTCAGGAGACCCACGGGAGG----------------CCCT--GGCCCATTCCCTCCAGCAGTGCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 125361 75 + 156971 TGGCTCTGGGTCCAACC----CCCCTTTC-CCTTCAGGAAACCCACGGGAGG----------------CCCT--GGCCCATTCCCTCCAGCAGTGCAA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475907 75 - 5823884 TGGCTCTGGGTCCAACC----CCCATTTC-CCTTCAGGAGACCAACGGGAGG----------------CCCT--GGCCCATTCCCTCCAGCAGTGCAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127030 74 + 159171411 TGGCTCTGGGCCCAA-C----CCCGTTTC-CCTTCAGGAGAGCAGCGGGAGG----------------CCCT--GACCTGTTCCCTCCGGCAGTGCAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16191736 68 + 16356641 TGGCTTTGGGCCCAA-C----CCCGTTTC-CCCTCAGGAGAGCAGCGGGAGG----------------CCCT--GATCCATTCCCTGTGGCA------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1052679 74 + 1231380 TGGCTCTGGGCCCAA-C----CCCGTTTC-CCTGCAGGAGAGCGGCGGGAGG----------------CCCT--GACCCATTCCCTCCGGCAGTGCTA i cebCap1.NW_016107870v1 C 0 I 27 s otoGar3.GL873542 22759085 75 + 22939663 GGGCTCTGGGTCTGATG----CCTACTTCTCCTTCAGGAGACTAGCAGGAGG----------------TTCT--GGCCT-TCATCTCCAGAAATGTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181720007 94 + 182113224 CTGCTCTA---CCAACCTGGACCACCTTC-TCAGCAAGAGGCTAGCAGGGGGACAAGACACAAAGCTTCCCTAAGGCTCTTTCCCTCCAAAACCACTG i mm10.chr2 I 2 C 0 s canFam3.chr24 47536412 24 + 47698779 --------------------------------------------------------------------------GGGCTTTCCGCTCCAGAAGCACAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178392 47 - 397369 ------------CGACC-------------CGCCCAGGAGGCTTTCCGGGGA----------------GCCT--------TTCCCTC--GGCATGCAG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56778125 388 + 57149010 I e aotNan1.NW_018500483v1 2592116 45 + 11732439 I e nomLeu3.chr13 109931869 1308 - 110113093 M a score=78708.000000 s hg38.chr20_KI270870v1_alt 4586 15 + 183433 TGAACTATCATGCTG s panTro5.chr20 66306181 15 + 66533130 TGAACTATCATGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62016865 15 + 62195757 TGAACTATCATGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 406226 15 - 578057 TGAACTATCATGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92658460 15 - 92844088 TGAACTGTCATGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320298 15 + 96509753 TGAACTGTCATGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16790129 15 - 16982598 TGAACTGTCATGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3599827 15 - 3785965 TGAACTGTCATGCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90223785 15 - 90373283 TGAACTGTCATGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 125436 15 + 156971 TGAACTGTCATGCTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475982 15 - 5823884 TGAACTGTCATGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127104 14 + 159171411 -CTGCCCTCCCGCTG i calJac3.chr5 C 0 I 5 s saiBol1.JH378156 16191804 1 + 16356641 --------------G i saiBol1.JH378156 C 0 I 5 s otoGar3.GL873542 22759160 12 + 22939663 TGGATTGTCCAG--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181720101 15 + 182113224 TGAACTCTTATTCTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47536436 14 + 47698779 AGAACTATCAGCAC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178439 15 - 397369 TGAACGGTCCTGCTG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56778125 388 + 57149010 I e cebCap1.NW_016107870v1 1052753 27 + 1231380 I e aotNan1.NW_018500483v1 2592116 45 + 11732439 I e nomLeu3.chr13 109931869 1308 - 110113093 M a score=1091893.000000 s hg38.chr20_KI270870v1_alt 4601 141 + 183433 -----TGGACCGTCAACCCAGCCCTGCTTCTCAGTGTGGGGCAGGTGTCTCAGGACGAAGGCGCCGCGTGACCA---CATGGGCAGCTCTGTT---CACAAAGTGGAGGCCTCGTTT-----TCCTG-------GTCTTGACTGCTCTGTTT---------------GGGTGGGAGAAG s panTro5.chr20 66306196 144 + 66533130 -----TGGACCGTCAACCGAGCCCTGCTTCCCAGTGTGGGGCAGGTGTCTCAGGACGAAGGTGCCGCGTGACCA---CATGGGCAGCTCTGTTGTTCACAAAGTGGAGGCCTCGTTT-----TCCTG-------GTCTTGACTGCTCTGTTT---------------GGGTGGGAGAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62016880 144 + 62195757 -----TGGACCGTCAACCGAGCCCTGCTTCCCAGTGTGGGGCAGGTGTCTCAGGACGAAGGTGCCGCGTGACCA---CATGGGCAGCTCTGTTGTTCACAAAGTGGAGGCCTCGTTT-----TCCTG-------GTCTTGACTGCTCTGTTT---------------GGGTGGGAGAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 406241 144 - 578057 -----TGGACCGTCTACCGAGCCCTGCTTCTCAGTGTGGGGCAGGTGTCTCAGGACGAAGGCGCCGCGTGACCA---CATGGGCAGCTCTGTTGTTCACAAAGTGGAGGCCTCGTTT-----TCCTG-------GTCTTGACTGCTCTGTTT---------------GAGTGGGAGAAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92658475 147 - 92844088 -----TGGACCGTCAACCGAGCTCTGCTTCTCGGTGTGTGGCAGGTGTCCCAGGAGGAAGACGCCGTGTGACCA---CATGGGCAGC-CTGTTGTTCACAAAGTCGAGGCCTCGTTT-----TCCTG-------GTCTCGACTGCTGTTTGT--AGCA---------GGGTGGGAGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320313 147 + 96509753 -----TGGACCGTCAACCGAGCTCTGCTTCTCGGTGTGTGGCAGGTGTCCCAGGAGGAAGACGCCGTGTGACCA---CATGGGCAGC-CTGTTGTTCACAAAGTCGAGGCCTCGTTT-----TCCTG-------GTCTCGACTGCTGTTTGT--AGCA---------GGGTGGGAGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16790144 147 - 16982598 -----TGGACCGTCAACCGAGCTCTGCTTCTCGGTGTGTGGCAGGTGTCTCAGGAGGAAGACGCCGTGTGACCA---CATGGGCAGC-CTGTTGTTCACAAAGTAGAGGCCTCGTTT-----TCCTG-------GTCTCGACTGCTGTTTGT--AGCA---------GGGTGGGAGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3599842 144 - 3785965 -----TGGACCGTCAACCGAGCTCTGCTTCTCGGTGTGTGGCAGGTGTCTCAAGAGGAAGACGCCGCGTGACCA---CATGGGCAGC-C---TGTTCACAAAGTAGAGGCCTCATTT-----TCCTG-------GTCTCGACTGCTGTTTGT--AGCA---------GGGTGGGAGAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90223800 147 - 90373283 -----TGGACCGTCAGCCGAGCTCTGCTTCTCGGTGTGTGGCAGGTGTCTCAGGAGGAAGATGCCGCGTGACCA---CGTGGGCAAC-CTGTTGTTCACAAAGTAGAGGCCTCGTTT-----TCCTG-------GTCTTGACTGCTGTTTGT--AGCA---------GGGTGGGAGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 125451 147 + 156971 -----TGGACCGTCAACCGAGCTCTGCTTCTCGGTGTGTGGCAGGTGTCTCAAGAGGAAGACGCCGCGTGACCA---CATGGGCAGC-CTGTTGTTCACAAAGTAGAGGCCTCGTTT-----TCCTG-------GTCTCGACTGCTGTTTGT--AGCA---------GGGTGGGAGAGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5475997 148 - 5823884 -----TGGACCGGCAACCAAGCTCTGCTTCTCGGTGTGTGGCGGGTGTCTCAGGAGGAAGACGCCGCGTGACCA---CATGGGCGGCTCTGTTGTTCACAAAGTAGAGGCCTCATTT-----TCCTG-------GTCTTGACTGCTGTTTGG--AGCA---------GGGTGGGAGAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127123 147 + 159171411 -----GGGACCCTCGGCTGAGCT---CTGCTTGGTGCGTGGGAGG-GGCTCAGGAGGAAGGCGCCGTGTGACCA--CCATGGGCAGCTCTGTTGTTCACAAAGTAGAGGCCTCATTT-----TCCTG-------GTCTCGACTTCTCTGTTTGGAGCA---------GGGTGGGGGAAG i calJac3.chr5 I 5 C 0 s saiBol1.JH378156 16191810 150 + 16356641 -----CGGACCATCAGCTGAGCCCTGCTGCTCGGTGCGTGGGAGG-GCCTCAGGAGGAAGGCGCCGCATGACCA--CCATGGGCAGCTCTGTCGTTCACAAAGTAGAGGCCTCATTT-----TCCTG-------GTCTCAACTGCTCTGTTTGGAGCA---------GGGTGGGGGAAG i saiBol1.JH378156 I 5 C 0 s cebCap1.NW_016107870v1 1052780 150 + 1231380 -----CGGACCATCAGCTGAGCCCTGCTTCTCGGTGCGTGGGAGG-GGCTCAGGAGGAAGGCGCCTCCTGACCA--CCATGGGCAGCTCTGTTGTTCACAAAGTAGAGGCCTCATTT-----TCCTG-------GTCTCGACTGCTCTGTTTGGAGCA---------GGGTGAGGGAAG i cebCap1.NW_016107870v1 I 27 C 0 s aotNan1.NW_018500483v1 2592161 147 + 11732439 -----CGGACCGTCAGCTGAGCCCTGCTTCTCGGTGC---GGAGG-GGCTCAGGAGGGAGGCACCGCGTGACCA--GCATGGGCAGCTCTGTCGTCCACAAAGTAGAGGCCTCATTT-----TCCTG-------GTCTCGACTGCTCTGTTTGGAGCA---------GAGTGGGGGAAG i aotNan1.NW_018500483v1 I 45 C 0 s otoGar3.GL873542 22759172 117 + 22939663 -----------------TGAGCTCTGCCTCTT-GTATGTGGGAAGCGGCCCCGAAGGAAGATCCCAC----------C----------CCCTCATTCCCAAAGCAGAGGGCCTGTGT-----TCCCA-------GTCTTGGCTGCTTTTTAG--GGCA---------AGGCAGGGAAC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181720116 150 + 182113224 -----CAGACTGTTTGGCAAGCCCTGCTTCTAACTGTGTGGGAAGTAA-TCAGGAGAAA---ATTCTGTGGCCT--CTGTAGGCTGC--------TCACAGCATGGAGGCACCACATGCTGGTCTTGGGTATGTGTCTTGGCTGCTCAGTAT-GGGCA---------GGGCAGGGCACG i mm10.chr2 C 0 I 5 s canFam3.chr24 47536450 104 + 47698779 -----AGGAGTGGCTG------------TCCGGGTGCGCAGC-GGTGGCTCAGGAGGAC------------CCC---CTCGGGCCACACTGCCGTTC---------------TGTGT-----GTCCC-------GGCCTGGCTGCTCAGTGT-----G---------GGGCGGCAGGG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178454 136 - 397369 TAGACGAGGCCGTCCCACGAGCTCTGCTTCTT------TGGGAGG------------------CAGTGTGGTCACCCCCGGGGTTGTGCCGTCCTCCCCAGGGCAGG---CTGGTGG-----GCTTG-------GTCTTGGCAGCTCCAAGG-GAGCAACATGCTCTGTCTGGGGG--- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56778125 388 + 57149010 I e nomLeu3.chr13 109931869 1308 - 110113093 M a score=779981.000000 s hg38.chr20_KI270870v1_alt 4742 83 + 183433 ATTC----TCT---------------------GGGGGTCCCCACATCCTCCCAAGGCTCCCCTCACAGCCTCTCCTTTGCTTGAAGCCAGAGGTCAGTGGCCGT----------------GCTG s panTro5.chr20 66306340 83 + 66533130 ATTC----TCT---------------------GGGGGTCCCCACATCCTCCCAAGGCTCCCCTCACAACCTCTCCTTTGCTTGAAGCCAGAGGTCAGCGGCCGT----------------GCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017024 83 + 62195757 ATTC----TCT---------------------GGGGGTCCCCACATCCTCCCAAGGCTCCCCTCACAACCTCTCCTTTGCTTGAAGCCAGAGGTCAGCGGCCGT----------------GCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 406385 83 - 578057 ATTC----TCT---------------------GGGGGTCCCCACATCCTCCCAAGGCTCCCCTCACAGCCTCTCCTTTGCTTGAAGCCAGAGGTCAGTGGCCGT----------------GCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92658622 120 - 92844088 ATCC----TCTGGGGGTCTCCACATCCTCCCGGGGGGTCTCCACATCCTCCCAGGGCTCCCCTCACAGCCTCTCCTTTGCTTGAAGCCGGAGGTCAGTGGCCGTGCAGTGTTTTGGGGGAGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320460 120 + 96509753 ATCC----TCTGGGGGTCTCCACATCCTCCCGGGGGGTCTCCACATCCTCCCAGGGCTCCCCTCACAGCCTCTCCTTTGCTTGAAGCCGGAGGTCAGTGGCCGTGCAGTGTTTTGGGGGAGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16790291 120 - 16982598 ATTC----TCTGGGGGTCTCCACATCCTCCCGGGGGGTCTCCACATCCTCCCAGGGCTCCCCTCACAGCCTCTCCTTTGCTTGAAGCCGGAGGTCAGTGGCCGTGCAGTGTTTTGGGGGAGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3599986 119 - 3785965 ATTC----TCTGGGGGTCTCCACATCCTCCC-GGGGGTCTCCGCATCCTCGCAGGGCTCCCCTCACAGCCTCTCCTTTGCTTGAAGCCGGAGGTCAGTGGCCGTGCAGTGTTTTGGGGGAGCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90223947 99 - 90373283 ATTC----TCT---------------------GGGGGTCTCCACATCCTCCCAGGGCTCCTCTCACAGCCTCTCCTTTGCTTGAAGCTGGAGGTCAGTGGCCGTGCAGTGTTGTGGGGGAGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 125598 120 + 156971 ATTC----TCTGGGGGTCTCCACATCCTCCCGGGGGGTCTCCACATCCTCCCAGGGCTCCCCTCACAGCCTCTCCTTTGCTTGAAGCCGGAGGTCAGTGGCCGTGCAGTGTTTTGGGGGAGCTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5476145 120 - 5823884 ATTC----TCTGGGGGTCTCCACATCCTCCCAGGGGGTCTCCACATTCTCCCAGGGCTCCCCTCACAGCCTCTCCTTTGCTTGAAGCCGGAGGTCAGCGGCCGTGCAGTATTTTGGGGAAGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127270 83 + 159171411 ATTT----TCT---------------------GGGGGTCGCCACATCCTCCCAGGGCTCCCCTCATACTCTTTCCTTTGCTTGGAGTCAGCGGTCGGTGGCTGT----------------GCTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16191960 81 + 16356641 ACTT----TCT---------------------GAGGGTCCCCACATCCTCCCAGGGCTCCCCTCAG--TCTCTCCTTTGCTTGAAGTCAGCGGTCAGTGGCTGT----------------GCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1052930 81 + 1231380 ATTT----TCT---------------------GGGGGTCCCCACATCCTCCCAGGGCTCCCCTCAG--TCTCTCCTTTGCTTGAAGTCAGTGGTCGGTGGCTGT----------------GCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2592308 81 + 11732439 ATTT----TCT---------------------GGGGGTCCCCACATCCTCCCAGGGCTCCCCTCAC--AGTCTCCTTTGCTTGAAGTCAGTGGTCGGTGGCCGT----------------GCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56778513 82 + 57149010 ATTC----CCT---------------------GGGGATCCCCACGTCCTCCCAGGACTCC-ACCACAGCCCCTCCTTTGCTTGAAACCAGAGCTCGGCGGCGGT----------------GCTG i micMur3.chr18 I 388 I 200 s otoGar3.GL873542 22759289 86 + 22939663 ATTCTCAGTCT---------------------GGGGATCCCCATGTCCTCCCGTGACCCC-CTCATAGCCTCTCCTTTGCTTGAAATCAGAGGCCAGCGGCTAT----------------GCTG i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181720271 85 + 182113224 ATGC----TCT------CTCCTTAT------------TCTCCACAGCCTCCCTCAGCTCTCC-AGCAGTCGCTCTTTTACTTGACAGTAGAGGTCAGCAGTTGT----------------ACTG i mm10.chr2 I 5 C 0 s canFam3.chr24 47536554 58 + 47698779 GCGC----CCT---------------------G-----CCCTGCTCTGTCTGGGGGCCCA--------------------TGGAAGTCAGGGGGCAGCAGCTCT----------------GCAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178590 30 - 397369 -------------------------------TGGGGGTCCCCACGTCCTCCCGGGTCTCCC--------------------------------------------------------------- i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 109931869 1308 - 110113093 M a score=1950013.000000 s hg38.chr20_KI270870v1_alt 4825 274 + 183433 TGTTGCGGG-----GGAAGCT-----------------GTGTGGAAGGAGAAGCTGGTGGCC----------ACAGCA--GA-------------------GTCCTG-----CTCT--------G------------GGGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCTCTGTGTAG-GGCCTGAGCTTGCTGCCCAACGGGAGGATGGCTTCACA-GCAGAGCCAGCATGAGGGG-------TGGGGCCTGGCAGGGCTTGCTTGAGCCAAACTGCAAAGGCTGTGGTGGCTGTGAGGACACTGCGGGG-GTTGGGGGGGGGGCGTCTGTACCTCAGGGGATGCCCCGCTGTGGTCA s panTro5.chr20 66306423 269 + 66533130 TGTTGCGGG-----GGAAGCT-----------------GTGTGGAAGGAGAAGCCGGTGGCC----------ACAGCA--GA-------------------GTCCTG-----CTCT--------G------------GGGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCTCTGTGTAG-GGCCTGAGCTTGCTGCCCAACGGGAGGATGGCTTCACA-GCAGAGCCAGCGTGAGGGG-------TGGGGCCTGGCAGGGCTTGCTTGAGCCAAACTGCAAAGGCTGTGGTGGCTGTGAGGACACTGCGGGG-GT-----GGGGGGCGTCTGTACCTCAGGGGATGCTCCGCTGTGGTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017107 269 + 62195757 TGTTGCGGG-----GGAAGCT-----------------GTGTGGAAGGAGAAGCCGGTGGCC----------ACAGCA--GA-------------------GTCCTG-----CTCT--------G------------GGGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCTCTGTGTAG-GGCCTGAGCTTGCTGCCCAACGGGAGGATGGCTTCACA-GCAGAGCCAGCGTGAGGGG-------TGGGGCCTGGCAGGGCTTGCTTGAGCCAAACTGCAAAGGCTGTGGTGGCTGTGAGGACACTGCGGGG-GT-----GGGGGGCGTCTGTACCTCAGGGGATGCCCCGCTGTGGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 406468 272 - 578057 TGTTGCGGG-----GGAAGCT-----------------GTGTGGAAGGAGAAGCCGGTGGCC----------ACAGCA--GA-------------------GTCCTG-----CTCT--------G------------GGGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCTCTGTGTAG-GGCCTGAGCTTGCTGCCCAACGGGAGGATGGCTTCACA-GCAGAGCCAGCAAGA-GGG-------TGGGGCTTGGCAGGGCTTGCTTGAGCCAAACTGCAAAGGCTGTGGTGGCTGTGAGGACACTGCGGGT-GT-GGGGGTGGGGTGTCTGTACCTCAGGGGATGCCCCGCTGTGGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92658742 271 - 92844088 TGTTGCGGG-----GGAAGCT-----------------GTGCGGAAGGAGAAGCCGGTGGCC----------ACAGCG--GA-------------------GTCCTG-----CTCT--------G------------GTGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCTCTGCGTAG-GGCCTGAACTTGCCGCCCAGCGAGAGGATGGCTTCACA-GCAGAGCCAGCATG-GGGG-------TGGGGCTTGCCAGGGCTTGCTTGAGCCAAACTGCAAGCGCTGTACCGGCTGTGAGAACACTGTGGGG-GT--GGGAGGGGGTCTCTGTACCTCAGGGGATGCCCTGCTGTGGTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320580 271 + 96509753 TGTTGCGGG-----GGAAGCT-----------------GTGCGGAAGGAGAAGCCGGTGGCC----------ACAGCG--GA-------------------GTCCCG-----CTCT--------G------------GTGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCTCTGCGTAG-GGCCTGAACTTGCCGCCCAGCGAGAGGATGGCTTCACA-GCAGAGCCAGCATG-GGGG-------TGGGGCTTGCCAGGGCTTGCTTGAGCCAAACTGCAAGCGCTGTACCGGCTGTGAGAACACTGTGGGG-GT--GGGAGGGGGTCTCTGTACCTCAGGGGATGCCCTGCTGTGGTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16790411 271 - 16982598 TGTTGCGGG-----GGAAGCT-----------------GTGCGGAAGGAGAAGCCGGTGGCC----------ACAGCG--GA-------------------GGCCTG-----CTCT--------G------------GTGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCTCTGCGTAG-GGCCTGAACTTGCCGCCCAGCGAGAGGATGGCTTCACA-GCAGAGCCAGCATG-GGGG-------TGGGGCTTGCCGGGGCTTGCTTGAGCCAAACTGCAAGCGCTGTACCGGCTGTGAGAACACTGTGGGG-GT--GGGAGGGGGTCTCTGTACCTCAGGGGATGCCCTGCTGTGGTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3600105 271 - 3785965 TGTTGCGGG-----GGAAGCT-----------------GTGCGGAAGGAGAAGCCGGTGGCC----------ACAGCG--GA-------------------GTCCTG-----CTCT--------G------------GTGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCTCTGCGTAG-GGCCTGAACTTGCCACCCAGCGAGAGGATGGCTTCACA-GCAGAGCCAGCATG-GGGG-------TGGGGCTTGCCAGGGCTTGCTTGAGCCAAACAGCAAGCGCTGTAGCGGCTGTGAGAACACTGTGGGG-GT--GGGAGGGGGTCTCTGTACCTCAGGGGATGCCCTGCTGTGGTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224046 288 - 90373283 TGTTGCGGG-----GGAAGCTGTGTTGTGGGGGAAGCCGTGCAGCAGGAGAAGCCAGTGGCC----------ACAGTG--GA-------------------GTCCTG-----CTCT--------A------------GTGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCTCTGCGTAG-GGCCTGAACTTGCCGCCCAACGAGAGGATGGCTTCACA-GCAGAGCCAGCATG-GGGG-------TGGGGCTTGCCAGGGCTTGCTTGAGCCAAACTGCAAGCGCTGTAGTGGCTGTGAGAACACTGTGGGG-GT--GGGAGGGGGTCTCTGTACCTCAGGGGATGCCCTGCTGTGGTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 125718 271 + 156971 TGTTGCGGG-----GGAAGCT-----------------GTGCGGAAGGAGAAGCCGGTGGCC----------ACAGCG--GA-------------------GTCCTG-----CTCT--------G------------GTGAC-GCCTGCTTCATTTACAAGCCCCAAGATGGCTCTGCGTAG-GGCCTGAACTTGCCGCCCAGCGAGAGGATGGCTTCACA-GCAGAGCCAGCATG-GGGG-------TGGGGCTTTCCAGGGCTTGCTTGAGCCAAACTGCAAGCGCTGTAGCGGCTGTGAGAACACTGTGGGG-GT--AGGAGGGGGTCTCTGTACCTCAGGGGATGCCCTGCTGTGGTCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5476265 258 - 5823884 TGTTGCGG-----------------------------------GAAGGAGAAGCCGGTGACC----------ACAGCG--GA-------------------GTCCTG-----CTCT--------G------------ATGAC-GCCTGCTTCATTTACAAGCCTCAAGATGGCCCTGCGTAG-GGCCTGAACTTGCTGCCCGACGAGAGGATAGCTTCACA-GCAGAGCCAGCATGAGGGG-------TGGGACTTGCCAGGGCTTGCTTGAGCCAAACTGTAAGCGCTGTGGTGGCTGCGAGAACACTG-GGGG-GT--GGGAGGGGGTCTCTGTACCTCAGGGGATGCCCTGCTGTGGTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127353 259 + 159171411 TGCTGCGGG-----GGAAACT-----------------GTGTAGAAGGAGAGCCCAGTGGCC----------ACAGCA--GA-------------------GTTCTG-----CTCT--------G------------GTGAT-GCCTGCTTCATTTACAAGCCTCAAGATGGTCCTTCGCAG-GGA-TGAGCTTGCTGCCTAGTGGGAGGGTGGCTTCGCA-GCAGAGCCAGCGTGAGGCA-------TGGGGCTTGGCAGGGCTTGCTTGACCCCAGCTGCAAGAACTGTGGTGGCTGCAGGGACACT-TGGGTGGG--GGGGTGCAGTATCTGTA------------CCTTGCCGCAGTCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192041 243 + 16356641 TGCTGCGGG-----GGAAGCT-----------------GTGTGGAAGAAGAACCCAGTGGCC----------ACAGCA--TA-------------------GTTCTG-----CTCT--------G------------GTGAC-GCCTGCTTCACTTACAAACCTCAAGATGGTCCTGCGCAG-GGACCGGGCTTGCTGCCCAGAGG-----------------------------GAGGTG-------CGGGGCTTGGCAGGGCTGGCTTGAGCCCAGCTGCAAGGACTGTGGTGGCTGCAGGGACACT-TGGGT-GG--GGGCTGCAGTATCTGTACCTCAGGGGATGCCTTGCTGCAGTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053011 240 + 1231380 TGCTTCGAG-----GGAAGCT-----------------GTGTG---GGAGAACCCAGTGGCC----------ACAGCA--GA-------------------GTTCTG-----CTCT--------G------------GTGAC-GCCTGCTTCATTTACAGACCTCAAGATGGTCCTGCGCAG-GGCCTGAGCTTGCTGCCCAGAGG-----------------------------GAGGTG-------TGGGGCTTGGCAGGGCTCGCTTGAGCCCAGCTGCAAGGACTGTGGTGGCTGCAGGGACACT-TGGGT-GG--GGGGTGCAGTATCTGTACCTCAGGGGATGCCTTGCTGCAGTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2592389 261 + 11732439 TGCTGTG------------CT-----------------GTGTGGAAGGAGGACCCAGTGGCC----------ACAGCA--TA-------------------GTTCTG-----CTCT--------G------------GCGAT-GCCTGCTTCATTTACAAGCCTCAAGATGGCCCTGCGCAG-GCC-TGGGCTTGCTGCCTGCTGGGAGGGTGGCTTTGCA-GCAGAGCCAGCGTGAGGCA-------TGGGGCTTGGCGGGGCTTGCTTGAGCCCAGCTGCGAGGACCGTGGTGGCTGCAGGGACACT-TGGGT-GG--GGGGTGCAGTATCTGTACCTC--GGGATGCCTTGCTGCAGTCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22759376 243 + 22939663 GTTTGGGGG-----GAAGACT-----------------GTGCAGAAGGAGACCCTGGTGGTCTTGGAGAGTGGCAGCACTGT-------------------ATCCTGTTGCACCTC--------A------------ATGACTGCCTGCTCC-CTTGCAAGCTTTAGGG-GTCTCTGGGCAA-GGCCTGAGCTTGCTGCCAAGTTGGAGGACAGCTTCATGTGCAGAACCAGCATG-GGGG-------AGGGGGCTGGCAGAGCTT--------------------------------------------CAGGA-TG--ATGAGAGTGTCTCTATATCAT-GGGAATGCCCCTCTGTGGCCA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181720356 234 + 182113224 ---CTAGAA-----ACACACT------------------TGTAGCCCGGGAAGACTGGAGTC----------A-GGAT--GT-------------------GTTCTA-----TTCTATACCCACA------------GTGACCACCTGCTTCATTTATAGG-GTTAGGACATATCCAAGCAA-GGCCTGGGCTTGGCATCAAAT------------------GAAGAGCTGGTATGAGAGC-------TGAAGCCTAAAATGGCTCATTTGAGCCAATCTGCAAGGACTATTACGGTTTTGGGGACATTGGAAGA-AG--AG---------TCGATACCTT-GGAGATA-------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47536612 246 + 47698779 -CTGGCAGGCCCCTGTGCCCT-----------------GTCTG------GATCCCGGTGGCC----------TTGGAA--GAGGAGTGGCACTTGGGATGGGCTCTG-----CTCC--------GCCTCTCCAGCGAACGAT-CCCTGCTTCATTTACCGGCGGTGGCCGGGGTCTGCGGGGAGGCCTGAGCTTCCTGCT--GCCGGGACTTGGCTT-----GAAGGGGCCGCCTCGGGAGCTGGGCTTAGGGCTCGGCAAGGCCTCCCTGAGCCAAG-------------------TGTGGGAGCCCCGAGGGG-GA--CGAGG-------------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178620 157 - 397369 --------------------------------------------------------------------------------AG-------------------GTTCTG-----CCTC--------C------------AGGAC-GCAGGGTAC----ACAGACGCCAAGTCGG--------AA-GACCC--------------------------CTTCACGCGCAGAGCTGGCGCC-GGGG-------TGGGGTTTGGCAGGACCCGCT---------------GGGCTG----GGCTGCGGAGACGCTGAGGGG-TC-------------TTTGTACCTCAGGGG-TACCCTGACCTGGTTG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56778595 200 + 57149010 I e nomLeu3.chr13 109931869 1308 - 110113093 M a score=564437.000000 s hg38.chr20_KI270870v1_alt 5099 49 + 183433 CCCAGAGAATCACCCTTCCTGGTCTACAGATGGAAGCTGCAGGTTGGTG s panTro5.chr20 66306692 49 + 66533130 CCCAGAGAATCACCCTTCCTGGTCTACAGATGGAAGCTGCAGGTTGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017376 49 + 62195757 CCCAGAGAATCACCCTTCCTGGTCTACAGATGGAAGCTGCAGGTTAGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 406740 49 - 578057 CCCAGAGAATCACCCTTCCTGGTCTACAGATGGAAGCTGCAGGTTGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92659013 49 - 92844088 ACCAGAGAATCACCCTTCCTGGTCTACAGATGGCAGCTGCAGGTTGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320851 49 + 96509753 ACCAGAGAATCACCCTTCCTGGTCTACAGATGGCAGCTGCAGGTTGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16790682 49 - 16982598 ACCAGAGAATCACCCTTCCTGGTCTACAGATGGCAGCTGCAGGTTGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3600376 49 - 3785965 ACCAGAGAATCACCCTTCCTGGTCTACAGATGGCAGCTGCAGGTTGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224334 49 - 90373283 CCCAGAGAATCACCCTTCCTGGTCTACAGATGGAAGCTGCAGGTTGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 125989 49 + 156971 ACAAGAGAATCACCCTTCCTGGTCTACAGATGGCAGCTGCAGGTTGGTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5476523 49 - 5823884 CCCAGAGAATCACCATCCCTGGTCTGCAGATGGAAGCTGCAGGTTGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127612 49 + 159171411 CCCAGAGAGTCACCCTTCCCGGTCTATAGATGGAAGCTGCAGGTTGGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192284 49 + 16356641 CCCAGAGTGTCACCCTTCCTGGTCTACAGATGGAAGCTGCAGGTTGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053251 49 + 1231380 CCCAGAGAATCACCCTTCCTGGTCTATAGACGGAAGCTGCAGGTTGGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2592650 49 + 11732439 CCCAGAGAGTCACCCTTCCTGGTCTACAGATGGAAGCTGCAGGTTGGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56778795 49 + 57149010 CCCAGGGACTCACCTTACCTGGTCTGCAGATGGAAGCTGCAGGTTGGTG i micMur3.chr18 I 200 I 280 s otoGar3.GL873542 22759619 49 + 22939663 CTCATGCAATTACCTTACTTGGTCTACAGACAGAAGTTGCAGGTTGGTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181720590 24 + 182113224 -------------TATTGTTGGTTCACAGAAGAAGAG------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47536858 32 + 47698779 -----------ACCCTCCCCGCTCT------GGAAGCTGCACTTTGGTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178777 36 - 397369 GCTGGAGAATCACCC-----------CGGACAGA--CTGCAGGCTGGTG i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 109931869 1308 - 110113093 M a score=375766.000000 s hg38.chr20_KI270870v1_alt 5148 31 + 183433 ACTTTGCAAATGCACTTCCTACAGATGAACT s panTro5.chr20 66306741 31 + 66533130 ACTTTGCAAATGCACTTCCTACAGATGAACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017425 31 + 62195757 ACTTTGCAAATGCACTTCCTACAGATGAACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 406789 31 - 578057 ACTTTGCAAATGCACTTCCTACAGATGAACT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92659062 31 - 92844088 ACTTTGCAAATGCACTTCCTACAGACGAACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320900 31 + 96509753 ACTTTGCAAATGCACTTCCTACAGACGAACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16790731 31 - 16982598 ACTTTGCAAATGCACTTCCTACAGACGAACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3600425 31 - 3785965 ACTTTGCAAATGCACTTCCTACAGACGAACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224383 31 - 90373283 ACTTTGCAGATGCACTTCCTACAGACGAACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126038 31 + 156971 ACTTTGCAAATGCACTTCCTACAGACGAACT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5476572 31 - 5823884 ACTTTGCAAGTGCACTTCCTACAGACGAACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127661 31 + 159171411 ACTTTGCAAATGCACTTCCTACAGACGAACT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192333 31 + 16356641 ACTTTGCAAATGCACTTCATACAGATGAACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053300 31 + 1231380 ACTTTGCAAATGCTCTTCCTACAGACGAACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2592699 31 + 11732439 ACTTTGCAGATGCACTTCCTACAGACGAACT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22759668 20 + 22939663 -----------ACTCTTCCTGCAGAAGAGCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181720614 31 + 182113224 GCTTTGTAAATGCCCTTTCTATGGGTCAGAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47536890 31 + 47698779 ACTCTGCGAACACTCTTCCTGCAGATAAACT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 178813 31 - 397369 GCTTGGCAAACGCATCCCCTGCAGACCATCT i dasNov3.JH569290 C 0 I 205 e micMur3.chr18 56778844 280 + 57149010 I e nomLeu3.chr13 109931869 1308 - 110113093 M a score=190618.000000 s hg38.chr20_KI270870v1_alt 5179 18 + 183433 ATTAAAAGACCTGCAACA s panTro5.chr20 66306772 18 + 66533130 ATTAAAAGACCTGCAACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017456 18 + 62195757 ATTAAAAGACCTGCAACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 406820 18 - 578057 ATTAAAAGACCTGCAACA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92659093 18 - 92844088 ATTAAAAGACCTGCAACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320931 18 + 96509753 ATTAAAAGACCTGCAACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16790762 18 - 16982598 ATTAAAAGACCTGCAACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3600456 18 - 3785965 ATTAAAAGACCTGCAACG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224414 18 - 90373283 ATTAAAAGACCTGCAACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126069 18 + 156971 ATTAAAAGACCTGCAACA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5476603 18 - 5823884 ATTAAAAGACCTGCAACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127692 18 + 159171411 ATTAAAATACCTGCAACA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192364 18 + 16356641 ATTAAAATTCCTGCAACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053331 18 + 1231380 ATTAAAATACCCACAACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2592730 18 + 11732439 ATTAAAATACCTGCAACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22759688 18 + 22939663 ATTGTGATACCTGCTTGA i otoGar3.GL873542 C 0 I 7 s mm10.chr2 181720645 18 + 182113224 AAAAAAATACCAGCAACC i mm10.chr2 C 0 C 0 s canFam3.chr24 47536921 18 + 47698779 ATCGAAACACTCGCAACA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56778844 280 + 57149010 I e dasNov3.JH569290 178844 205 - 397369 I e nomLeu3.chr13 109931869 1308 - 110113093 M a score=2392351.000000 s hg38.chr20_KI270870v1_alt 5197 240 + 183433 TT-GAAAAAACTCATTTTTTCCACCA-----------------AAACCTTGGCCAGGTAACCTACCTTAGGCACCTGCAAAGAACAGGAAGTGATGGCTGTCTCG-CAACAGAGCCTGGGCTGCTCCTCCTGCTCTGGGGAGTCTAGGCCGTGGGGACTGT-TCTGGGGAGGCTCATGCTGTCTCCATGACGTCTGTGGCAGGAGTCCCTGAGGACGGGAGCTGCCTAGCTACA--GTTTTCTTGCCAAGGCGAGGTGTTTT s panTro5.chr20 66306790 240 + 66533130 TT-GAAAAAACTCATTTTTTCCACCA-----------------AAACCTTGGCCAGGTAACCTACCTTAGGCACCTGCAAAGAACAGGAAGTGATGGCTGTCTCG-CAACAGAGCCTGGGCTGCTCCTCCTGCTCTGGGGAGTCTAGGCCGTGGGGACTGT-TCTGGGGAGGCCCATGCTGTCTCCATGACGTCTGTGGCAGGAGTCCCTGAGGACGGGAGCTGCCTAGCTACA--GTTTTCTTGCCAAGGCGAGGTGTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017474 240 + 62195757 TT-GAAAAAACTCATTTTTTCCACCA-----------------AAACCTTGGCCAGGTAACCTACCTTAGGCACCTGCAAAGAACAGGAAGTGATGGCTGTCTCG-CAACAGAGCCTGGGCTGCTCCTCCTGCTCTGGGGAGTCTAGGCCGTGGGGACTGT-TCTGGGGAGGCCCATGCTGTCTCCATGACGTCTGTGGCAGGAGTCCCTGAGGACGGGAGCTGCCTAGCTACA--GTTTTCTTGCCAAGGCGAGGTGTTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 406838 241 - 578057 TTGGAAAAAACTCATTTTTTCCACCA-----------------AAACCTTGGCCAGGTAACCTACCTTAGGCACCTGCAAAGAACAGGAAGTGATGGCTGTCTCG-CAACAGAGCCTGGGCTGCTCCTCCTGCTCTGGGGAGTCTAGGCCGTGGGGACTGT-TCTGGGGAGGCCCATGCTGTCTCCATGACGTCTGTGGCAGGAGTCTCTGAGGACGGGAGCTGCCTAGCTACA--GTTTTCTTGCCAAGGCGAAGTGTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109933177 240 - 110113093 TT-GAAAAAACTCATTTTTTCCACCA-----------------AGACCTTGGCCAGGTAACCTACCTTAGGCACCTGCAAAGAACAGGAAGTGATGGCTGTGTCC-CAACAGAGCCTGGGCTGCTCCTCCAGCTCTGGGGAGTCTAGGCCGTGGGGACTGT-TCTGGGGAGGCCCATGCTGTCTCCATGACGTCTGTGTCAGGAGTCTCTGAGGTCGGGAGCTGCCTAGCTACA--GTTTTCTTACCAAGGTTAAGTGTTTT i nomLeu3.chr13 M 1308 C 0 s rheMac8.chr10 92659111 238 - 92844088 TT-GTAAAAACTCA-TTTTTCCATCA-----------------AGACCTTGGCCAGGTA----ACCTTAGGCTCCTGCCAAGAACAGGAAGTGATGGCCGTCTCA-CCACAGAGCCTGGGCTGCTCCTCCAGCTCTGGGGAGTCTAGGCCGTGGGGACTGTCCCTGGGGAGGCCCCTGCTGTCTCCGTGACATCTGTGGCAGGAGTCTCTGAGAGCGGGAGCTGCCTAGCTACAGTGTTTTCTTGCCAAGGCTAAGTGTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96320949 238 + 96509753 TT-GTAAAAACTCA-TTTTTCCATCA-----------------AGACCTTGGCCAGGTA----ACCTTAGGCTCCTGCCAAGAACAGGAAGTGATGGCCGTCTCA-CCACAGAGCCTGGGCTGCTCCTCCAGCTCTGAGGAGTCTAGGCCGTGGGGACTGTCCCTGGGGAGGCCCCTGCTGTCTCCGTGACATCTGTGGCAGGAGTCTCTGAGAGCGGGAGCTGCCTAGCTACAGTGTTTTCTTGCCAAGGCTAAGTGTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16790780 238 - 16982598 TT-GTAAAAACTCA-TTTTTCCATCA-----------------AGACCTTGGCCAGGTA----ACCTTAGGCTCCTGCCAAGAACAGGAAGTGATGGCCGTCTCA-CCACAGAGCCTGGGCTGCTCCTCCAGCTCTGGGGAGTCTAGGCCGTGGGGACTGTCCCTAGGGAGGCCCCTGCTGTCTCCGTGACATCTGTGGCAGGAGTCTCTGAGAGCGGGAGCTGCCTAGCTACAGTGTTTTCTTGCCAAGGCTAAGTGTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3600474 239 - 3785965 TT-GTAAAAACTCATTTTTTCCATCA-----------------AGACCTTGGCCAGGTA----ACCTTAGGCTCCTGCCAAGAACAGGAAGTGATGGCCGTCTCA-CCACAGAGCCTGGGCTGCTCCTCCAGCTCTGGGGAGTCTAGGCCGTGGGGACTGTCCCTGGGGAGGCCAGTGCTGTCTCCGTGACATCTGTGGCAGGAGTCTCTGAGAACGGGAGCTGCCTAGCTACAGTGTTTTCTTGCCAAGGCTAAGTGTTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224432 239 - 90373283 TT-GTAAAAACTCATTTTTTCCATCA-----------------AGACCTTGGCCAGGTA----ACCTTAGGCTCCTGCCAAGAACAGGAAGTGATGGCCGTCTCA-CCACAGAGCCTGGGCTGCTCCTCCAGCTCTGGGGAGTCTAGGCTGTGGGGACTGTCCCTGGGGAGGCCCGTGCTGTCTCCGTGACATCTGTGGCAGGAGTCTCTGAGAACGGGAGCTGCCTAGCTACAGTGTTTTCTTGCCAAGGCTAAGTGTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126087 239 + 156971 TT-GTAAAAACTCATTTTTTCCATCA-----------------AGACCTTGGCCAGGTA----ACCTTAGGCTCCTGCCAAGAACAGGAAGTGATGGCCGTCTCA-CCACAGAGCCTGGGCTGCTCCTCCAGCTCTGGGGAGTCTAGGCCGTGGGGACTGTCCCTGGGGAGGCCCGTGCTGTCTCCGTGACATCTGTGGCAGGAGTCTCTGAGAACAGGAGCTGCCTAGCTACAGTGTTTTCTTGCCAAGGCTAAGTGTTTT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5476621 239 - 5823884 TT-GAAAAAACTCATTTTTTCCATCA-----------------AGACTTTGGCCAGGTA----ACCTTAGGCTCCTGCCAAGAACAGTAAGTGATGGCCATCTCA-CCACAGAGCCTGGGCTGCTCCTCCAGCTCTGGGGAGTCTAGGCCGTGGGGACTGTCCCTGGGGAGGCCCATGCTGTCTGCGTGACATCTGTGGCAGGAGTCTCTGAGAATGGGAGCTGCCTAGCTACAGTGTTTTCTTGCCAAGGCTAAGTGTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127710 227 + 159171411 TT-GAAAAAACTCAACTTTTTCACCA-----------------AGACCTTGGCCAGGTA----ACCTTAGGCAGCTGCAAAGAACAGGAAGTGATGG-TGTCTCA-CCACAGAGC-----CTGCTCCTCCAGGTCTGGGGAGCCTTAGCCGTGGGGATTGTTCCTGAGGAGGCCTGTGCTGTCTCCATGACATCTGTGGC------CTCTGCGAACGGGAGCTGCCTAGCTGCAGTGTTTTCTTGCCAAGGCTAAGTGTTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192382 233 + 16356641 TT-GAAAAAACTCAATTTTTCCACCG-----------------AGACCTTGGCCAGGTA----ACCTTAGGCAGCTCCAAAGAACAGGAAGTGATGG-TGTCTCC-CCACAGAGC-----CTGCTCCTCCTGGTCTGGGGAGCCTCAGCCGTGGGGATTGTTCCTGAGGAGGCCCATACTGTCTCCGGGACGTCTGTGGCAGGAGTCTCTGAGAACGAGAGCTGCCTAGCTGCAGTGTTTTCTTGCCAAGGCTAAGCATTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053349 221 + 1231380 TT-GAAAAAACTCAATTTTTCCA-----------------------------CCAGGTA----ACCTTAGGCAGCTGCAAAGAACAGGAAGTGATGG-TGTCTCG-CCACAGAGC-----CTGATCCTCCAGGTCTGGGGAGCCTTAGCCGTGGGGATTGTTCCTGGGGAGGCCCATGCTGTCTCCATGACGTCTGTGGCAGGAGTCTCTGAGAACGGGAGCTGCCTAGCTGCAGTGTTTTCTTGCCAAGGCTAAGCGTTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2592748 233 + 11732439 TT-GAAAAAACTCCGTTTTTCCACCG-----------------AGACCTTGGCCAGGTA----ACCTTAGGCAGCTGCAAAGAACAGGAAGTGATGG-TGTCTCG-CCACAGAGC-----CTGCTCCTCCAGGTCTGGGGAGCCTTAGCTGTGGGGATTGTTCCTGAGGAGGCCCATGCTGTCTCCGTGACATCTGTGGCAGGAGTCTCTGAGAACGGGAGCTACCTAGCTGCAGTGTTTTCTTGCCAAGGCTAAGCGTTTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22759713 236 + 22939663 CT-GAGAAGACTCTGTTTTTTAACTG-----------------AGACCTTAGCCAGGTG----ACCTTAGCCACCTGCAAAGAATAGGAAGCACTGTTTGGCTCAGCCACAGAGCCTGGGTTGG--ATTCTGCCTTGGGGAGCCTTTTTCATAGGGGCTATTCCTACAGAGG-TTGGGCTCTCTCC-CAATGCCTGTGGCCGGAGGCTCTGAGGACAGGAGCTGGCTGGCAGCACTGCTTTCTTGCTAAGGCTAAAAAATTT i otoGar3.GL873542 I 7 C 0 s mm10.chr2 181720663 186 + 182113224 TT-GGATAGAATCTGATCTTACACAG-----------------AGACCTTGGTTAGGTG----GTTTCATGCC---------------------------------ATGCAGAACCCAGGCTGGT--TCCTGTCTCAGAGAGACCTGGCCTTAACAATCTT-TCTGGGGAGACCAGGGTTCTTTCAATGACACTTGTG-----------------CAGGAGCCA-TTAGCTCTAGTGTTTTCTTGCTAATGCTAGAAACTTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47536939 194 + 47698779 CT-GAAAAGACT--GTCCTGCCCCCGTCCGTGAGCCGGGCTGCGGGCCTCAGCCAGGTG----ACCTCGGGCACCTGCAAACAACAGGAAGCGCTGA---------C-------TTTGGGCCAGCTTCCCGGCTCCAGGGAGCCCTGGCTCTGGGGGTGGATCCTGGGGAGGCTCG-------------------------GGAGGCGC----------AGCTGCC-----ACAGCGCGGGCCTTCCATGGCGAGGC----- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56778844 280 + 57149010 I e dasNov3.JH569290 178844 205 - 397369 I a score=1326804.000000 s hg38.chr20_KI270870v1_alt 5437 104 + 183433 GTGAATCTGTGCTGATGTAATGTGCACCTTCACGTATTTATGCATGTGGCAAGCGTTACTTCCTGTGCACGTAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA s panTro5.chr20 66307030 104 + 66533130 GTGAATCTGTGCTGATGTAATGTGCACCTTCACGTATTTATGCATGTGGCAAGCGTTACTTCCTGTGCACGTAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017714 104 + 62195757 GTGAATCTGTGCTGATGTAATGTGCACCTTCACGTATTTATGCATGTGGCAAGCGTTACTTCCTGTGCACGTAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407079 104 - 578057 GTGAATCTGTGCTGATGTAATGTGCACCTTCACGTATTTATGCATGTAGCAAGCGTTACTTCCTGTGCACGTAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109933417 104 - 110113093 GTGAATCTGTGCTGATGTAATGTGCATCTTCACGTATTTATGCATGTGGCAAGCGTTACTTCCTGTGCACGTAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92659349 104 - 92844088 GTGACTCTGTGCTGACGTAATGTGCATCTTCACGTATTTATGCATGTGGCAATCGTTACTTCCTGTGCACGCAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321187 104 + 96509753 GTGACTCTGTGTTGACGTAATGTGCATCTTCACGTATTTATGCATGTGGCAATCGTTACTTCCTGTGCACGCAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791018 104 - 16982598 GTGACTCTGTGCTGACGTAATGTGCATCTTCACGTATTTATGCATGTGGCAATCGTTACTTCCTGTGCACGCAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3600713 104 - 3785965 GTGACTCTGTGCTGACGTAATGTGCATCTTCACGTATTTATGCATGTGGCAATCGTTACTTCCTGTGCACGCAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224671 104 - 90373283 GTGACTCTGTGCTGACGTAATGTGCATCTTCACGTATTTATGCATGTGGCAATCGTTACTTCCTGTGCACGCAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126326 104 + 156971 GTGACTCTGTGCTGACGTAATGTGCATCTTCACGTATTTATGCATGTGGCAATCGTTACTTCCTGTGCACGCAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5476860 104 - 5823884 GTGACTCTGTGCTGACGTAATGTGCATCTTCACGTATTTATGCATGTGGCAAGCGTTACTTCCTGTGCACGCAGCCAGCCCTGGGTCTGTCTCTGGGGTAATGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58127937 91 + 159171411 GTGAATCTGCACTGATGTAATTTGCATCTTCACGTATTTATGCATGTGG-------------CTATGCACATAGCCCGCCCTGGGTCTGTCTCCCAGGTCATGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192615 104 + 16356641 GTGAATCTGTGCTGATGTAATTTGCGTCTTCACGTATTTATGCATGTGGCAAGTGTGAAGTCCTATGCACGTAGCCCGCCCTGGGTCTGTCTTCCAGGTCATGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053570 104 + 1231380 GTGAATCTGTGCTGATGTAATTTGCATCTTCACGTATTTATGCATGTGGCAAGTGTGACGTCCTATGCACGTAGTCCACCCTGGGTCTGTCTCCCAGGTCACGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2592981 103 + 11732439 GTGAATCTGTGCTGATGTAATGTGCATCTTCACGCATTTATGCATGTGGCAAGTGTGACTT-CTATGCACGTAGCCTGCCCTGGGTCTGTCTCCCAGATCATGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56779124 104 + 57149010 GTGAATCTGTGCTGGTGTGATGTGCATCTTCGTGTATTTATGCATGCAGCAAGTCTCATCTCCCGTGCACGTGGCCAGCCCTGCACCTGTCTCTGCGGCAATGA i micMur3.chr18 I 280 I 2623 s otoGar3.GL873542 22759949 103 + 22939663 GTGAATTTGTGCTGACATGATATGCATCTTTATGTATTTCTGCATGAGACAAGTGTCATTTCCCATGCATGTAGCCAACCTTGAACCTGTCTCTGTGGTAATG- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181720849 90 + 182113224 GTGAATTTGTAT-------------ATCTTTATGTATTTAAGCATGCAACAAATGTCATTTTC-GTGCATGTAGCTAGCCCTGAACCTGCCTCTGGGGTAATGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47537133 86 + 47698779 -----------CCAAAG--ACCTGTATCTTCATGTATTTATGCATGTGACGAGCATGATTTCCCCCGCATGTCACCAACCCTGACCTCGCATCCAGGGT----- i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 178844 205 - 397369 I a score=308359.000000 s hg38.chr20_KI270870v1_alt 5541 27 + 183433 AAAAGGA----CCCT--AATAAACACCTGCTCA s panTro5.chr20 66307134 27 + 66533130 AAAAGGA----CCCT--AATAAACACCTGCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017818 27 + 62195757 AAAAGGA----CCCT--AATAAACACCTGCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407183 27 - 578057 AAATGGA----CCCT--AATAAACACCTGCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109933521 27 - 110113093 AAAAGGA----CCGT--AATAAGCACCTGCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92659453 27 - 92844088 AAAAGGA----CCCT--AATAAACACCTGCTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321291 27 + 96509753 AAAAGGA----CCCT--AATAAACACCTGCTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791122 27 - 16982598 AAAAGGA----CCCT--AATAAACACCTGCTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3600817 27 - 3785965 AAAAGGA----CCCT--AATAAACACCTGCTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224775 27 - 90373283 AAAAGGA----CCCT--AATAAACACCTGCTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126430 27 + 156971 AAAAGGA----CCCT--AATAAACACCTGCTCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5476964 27 - 5823884 AAAAGGA----CCCT--AATAAACACCTGCTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128028 27 + 159171411 AAAAGGA----GCCT--AATAAATGCTTGCTCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192719 27 + 16356641 AAAAGGA----CCCT--AATAAATGCTCACTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053674 27 + 1231380 AAAAGGA----CCCT--AATAAACGCTCGCTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2593084 27 + 11732439 AAAAGGA----CCCT--AATAAACGCTCGCTCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22760052 27 + 22939663 --AAGGA----GCCTGAAACAACCACCTGCTCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181720939 27 + 182113224 ---AGGAGTTCTCAT--AATAAACACTTAC-CA i mm10.chr2 C 0 C 0 s canFam3.chr24 47537219 21 + 47698779 ----------TCCCT--AATAAACCCTTGCACA i canFam3.chr24 C 0 I 1720 e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 178844 205 - 397369 I a score=208006.000000 s hg38.chr20_KI270870v1_alt 5568 29 + 183433 CTG---GCTGGGT----------AT--TCTTTGTAACCAGTGTT s panTro5.chr20 66307161 29 + 66533130 CCG---GCTGGGT----------AT--TCTTCGTAACCAGTGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017845 29 + 62195757 CCG---GCTGGGT----------AT--TCTTCGTAACCAGTGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407210 29 - 578057 CCG---GCTGGTT----------AT--TCTTCGTAACCAGTGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109933548 39 - 110113093 CCG---GCTGGGTCTTCTTCATAAT--TCTTCATAACAGGTGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92659480 28 - 92844088 CTG---GCTGGGT----------A---TCTTCATGACAGGTGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321318 28 + 96509753 CTG---GCTGGGT----------A---TCTTCATGACAGGTGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791149 28 - 16982598 CTG---GCTGGGT----------A---TCTTCATGACAGGTGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3600844 28 - 3785965 CTG---GCTGGGT----------A---TCTTCATGACAGGTGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224802 28 - 90373283 CTG---GCTGGGT----------A---TCTTCATGACAGGTGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126457 28 + 156971 CTG---GCTGGGT----------A---TCTTCATGACAGGTGTT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5476991 29 - 5823884 CTG---GCTGGGT----------AC--TCTTCATAACAGGTGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128055 29 + 159171411 CTG---GCTGGGT----------AC--TCTTCATAACAGGAGCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192746 29 + 16356641 CTG---GCTGGGT----------AC--TCTTCATAACAGGAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053701 29 + 1231380 CTG---GCTGGGT----------AC--TCTTTATAACAGGAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2593111 29 + 11732439 CTG---GCTGGGT----------AC--TGTTCATTACAGGAGCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22760079 28 + 22939663 CAGAGAACTGGGT----------G---TTTTCA--GCAGGAG-T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181720966 30 + 182113224 GTG---ACCAG-T----------ACTGCCTGTAGAATAAGTCTT i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 178844 205 - 397369 I a score=1472604.000000 s hg38.chr20_KI270870v1_alt 5597 138 + 183433 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTCTGGAGTGACTTTTCTGGGAT--TGGCACGTGGGTGGGAGGAGGCTATGG-GTTTAGGC---TGAATTCT-TGTACCTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGCCCTCAGT s panTro5.chr20 66307190 138 + 66533130 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTCTGGGGTGACTTTTCTGGGAT--TGGCACGTGGGTGGGAGGAGGCTATGG-GTTTAGGC---TGAATTCT-TGTACCTGTTCTGTGCTGC-TCAACAGGCTGGGCTCTGCCCTCAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62017874 138 + 62195757 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTCTGGGGTGACTTTTCTGGGAT--TGGCACGTGGGTGGGAGGAGGCTATGG-GTTTAGGC---TGAATTCT-TGTACCTGTTCTGTGCTGC-TCAACAGGCTGGGCTCTGCCCTCAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407239 138 - 578057 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTCTGGGGTGACTTTTCTGGGAT--TGGCACGTGGGTGGGAGGAGGCTATGG-GTTTAGGC---TGAATTCT-TGTACCTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGCCCTCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109933587 138 - 110113093 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTCTGGGGTGACTTTTCTGGGAT--TGGCACGTGGCTGGGAGGAGGCTGTGG-GTTTAGGC---TGAATTCT-TGTACCTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGTCCTCAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92659508 139 - 92844088 TCTGGCTCCTGCCA---CCTGGGGATTTG--CCTTTGGGGTGACTTTTCTGGGAT--TGGCACGTGAGTGGGAGGAGGCTATGGGGTTTAGGC---TGAGTTCT-TGCACTTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGTCCTCAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321346 139 + 96509753 TCTGGCTCCTGCCA---CCTGGGGATTTG--CCTTTGGGGTGACTTTTCTGGGAT--TGGCACGTGAGTGGGAGGAGGCTATGGGGTTTAGGC---TGAGTTCT-TGCACTTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGTCCTCAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791177 139 - 16982598 TCTGGCTCCTGCCA---CCTGGGGATTTG--CCTTTGGGGTGACTTTTCTGGGAT--TGGCACGTGAGTGGGAGGAGGCTATGGGGTTTAGGC---TGAGTTCT-TGCACTTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGTCCTCAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3600872 139 - 3785965 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTTTGGGGTGACTTTTCTGGGAT--TGGCACGTGAGTGGGAGGAGGCTATGGAGTTTAGGC---TGAGTTCT-TGCACTTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGTCCTCAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224830 139 - 90373283 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTTTGGGGTGACTTTTCTGGGAT--TGGCCCGTGAGTGGGAGGAGGCTATGGGGTTTAGGC---TGAGTTCT-TACACTTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGTCCTCAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126485 139 + 156971 TCTGGCTCCTGCCA---CCTGGGGATTTG--TTTTTGGGCTGACTTTTCTGGGAT--TGGCACGTGAGTGGGAGGAGGCTATGGAGTTTAGGC---TGAGTTCT-TGCACTTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGTCCTCAGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5477020 139 - 5823884 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTTTGGGGTGACTTTTCTGGGAT--TAACACGTGAGTGGGAGGAGGCTATGGGGTTTAGGC---TGAGTTCT-TGCACTTGTCCTGTGCTGC-TCAACAGGCTGGGCTCTGTCCTCAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128084 138 + 159171411 TCTGGCTCTTGCCA---CCTGGGGATTTG--CTTCTGGAGCGGCTTTTCTGGGAT--TGGCACATGGGTGGGA-GGGGCTGTGGGGTTTGGGC---TGAGTCCT-TGCACCTGCCCTGAGCTGC-CCAGCAGGCTGGGCCCTGCCCTCAGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192775 139 + 16356641 TCTGGCTCTTGCCA---CCTGGGGATTTC--CTTCTGAAGCAGCTTTTCTGGGAT--TGGCACGTGGGTGGGAGGGGGCTGTGGGGTTTGGGC---CGAGTCCT-CGAGCCTGCCCTGAGCTGT-CCAGCAGGCTGGGCCCTGCCCTCAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053730 139 + 1231380 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTCTGGAGCGGCTTTTCTGGGAT--TGGCACGTGGGCGGGAGGGGGCTGCGGCGTTTGGGC---TGAGTCCT-TGCACCTGCCCTGAGCTGC-TCAGCAGGCTGGGCCCTGCCCTCAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2593140 138 + 11732439 TCTGGCTCCTGCCA---CCTGGGGATTTG--CTTCTGGAGCGGCTTTTCTGGGAT--TGGCACGTGGGCGGGA-GGGGCTGTGGGGTTTGGGC---TGAGTCCT-TGCACCTGCCCCGAGCTGG-TCAGCAGGCTGGGCCCTGCCCTCAGT i aotNan1.NW_018500483v1 C 0 I 7 s otoGar3.GL873542 22760107 130 + 22939663 TCTGAGTCCTGCCA---CGAGGGGGACTGGCCTGTTGGGGTAACTTATCTGTGATCCCATCCCATGGGTGGGA-GGGGCTGGGG--------------AATCCT-CTCACCTGCTCTGTGCT-T-TCCACAGATCAGGCTCAGTCCTTAGA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181720996 102 + 182113224 TCTGATTCCAGCTA---CATAAG---------------AGTAACTTCCTGGGTAT--TGATATGC-ACTGGAATGAGGC-ATAG-GACTAGGCTAATGGGTTTT-AAAACCTGT-------------------------TCTGCCCTTGGC i mm10.chr2 C 0 C 0 s dasNov3.JH569290 179049 138 - 397369 TCCTGCCTCTGCCAGGGCCCAGGGGTCGG------TCGGCTGGTTTTTCTGGGAT--GAGCGTGTGGGTGAGGGGTGGCTGTGGGGTTCTGGTGGGTGAGTTCTGCCCACCTGCTCTGTGTTCCAGCCTCAGGCCAGGCTCTGTCC----- i dasNov3.JH569290 I 205 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I a score=131532.000000 s hg38.chr20_KI270870v1_alt 5735 25 + 183433 GAAACGTCCCCCAGGAGGCTGCAAC s panTro5.chr20 66307328 25 + 66533130 GAAGCGTCCCCCAGGAGGCTGCAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018012 25 + 62195757 GAAGCGTCCCCCAGGAGGCTGCAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407377 25 - 578057 GAAGCGTCCCCCAGGAGGCTGCAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109933725 25 - 110113093 GAAGGGTCCCCCAGGAGGCTGCAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92659647 25 - 92844088 GAAGGGTCCTCCAGGAGGCTGCAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321485 25 + 96509753 GAAGGGTCCTCCAGGAGGCTGCAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791316 25 - 16982598 GAAGGGTCCTCCAGGAGGCTGCAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601011 25 - 3785965 GAAGGGTCCTCCAGGAGGCTGCAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224969 25 - 90373283 GAAGGGTCCTCCAGGAGGCTGCAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126624 25 + 156971 GAAGGGTCCTCCAGGAGGCTGCAAC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5477159 25 - 5823884 GAAGGGTCCTCCAGTAGGCTGGAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128222 7 + 159171411 GGTGGGT------------------ i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192914 7 + 16356641 GGTGGGT------------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053869 7 + 1231380 GGTGCGT------------------ i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22760238 25 + 22939663 GGGGGGTCACCCAACAGGTACCAAC i otoGar3.GL873542 I 1 I 1 s mm10.chr2 181721098 25 + 182113224 AGAGGGACTTTAAGGAGCCTCTTGG i mm10.chr2 C 0 I 2 s dasNov3.JH569290 179187 21 - 397369 ----CGGCTCCCAGGAAGCTCTGAC i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e aotNan1.NW_018500483v1 2593278 7 + 11732439 I a score=2482516.000000 s hg38.chr20_KI270870v1_alt 5760 284 + 183433 CCTGGGGAGAGTTGAAGCCAGTTAATGGTGTGTTGGCCGGGCTGTTACC-TTTTCTTCAGCACACACGGTTTCTCTCTAAACAACCGATGGCTGCACCTCTCCCCTGCCCCCT-----GGAAAGAGAGGTTTCCTGAGGATACAGTGGGAGGGTGCTGCTCCCACCCAGGTTGCAGGGTTTTCTTACCCCCATTTCATCTCAGAAGAACCCCTGCTCCTGCTCATTTCCCCTTCCTTGAGCAGATCTGAGGGG----AGTTTTGGTGAAGGATGAGCA-------GACGG-CCTCCTCTAG-G s panTro5.chr20 66307353 284 + 66533130 CCTGGGGAGAGTTGAAGCCAGTTAATGGTGTGTTGGCCGGGCTGTTACC-TTTTCTTCAGCACACACGGTTTCTCTCTAAACAACCGATGGCTGCACCTCTCCCCTGCCCCCT-----GGAAAGAGAGGTTTCCTGAGGATCCAGTGGGAGGGTGCTGCTCCCACCCAGGATGCAGGGTTTTCTTCCCCCCATTTCATCTCAGAAGATCCCCTGCTCCTGCTCATTTCCCCTTCCTTGAGCAGATCTGAGGGG----AGTTTTGGTGAAGGATGAGCA-------GACTG-CCTCCTCTGG-G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018037 284 + 62195757 CCTGGGGAGAGTTGAAGCCAGTTAATGGTGTGTTGGCCGGGCTGTTACC-TTTTCTTCAGCACACACGGTTTCTCTCTAAACAACCGATGGCTGCACCTCTCCCCTGCCCCCT-----GGAAAGAGAGGTTTCCTGAGGATCCAGTGGGAGGGTGCTGCTCCCACCCAGGATGCAGGGTTTTCTTCCCCCCATTTCATCTCAGAAGAACCCCTGCTCCTGCTCATTTCCCCTTCCTTGAGCAGATCTGAGGGG----AGTTTTGGTGAAGGATGAGCA-------GACTG-CCTCCTCTGG-G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407402 284 - 578057 CCTGGGGAGAGTTGAAGCCAGTTAATGGCGTGTTGGCCGGGCTGTTACCTTTTTTTTCAGCACACACGGTTTCTCTCTAAACAACCGATGGCTGCACCTCTCCCCTGCCCCCT-----GGAAAGAGAGGTTTCCTGAGGATCCAGTGGGAGGGTGCTGCTCCCACCCAGGTTGCAGGGTTTTCTT-CCCCCATTTCATCTCAGAAGAACCCCTACTCCTGCTCATTTCCCCTTCCTTGAGCAGATCTGAGGGG----AGTTTTGGTGAAGGATGAGCA-------GACGG-CCTCCTCTGG-G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109933750 283 - 110113093 CCTGGGGAGAGTTGAAGCCGGTTAATGGTGTGTTGGCCGGGCTGTTACC-TTTTCTTCAGCACACACAGTTTCTCCCTAAACAACCGATGGCTGTACCTCTCCCCTGCCCCC------AGAAAGAGAGGTTTCCTGAGGGTCCAGTGGGAGGGTGCTGCTCCCACCCAGGTTTCAGGGTTTTCTTCCCCCGATTTCATCTCAGAAGAACCCCCGCTCCTGCTCATTTCCCCTTCCTTGAGCAGATCTGAGGGG----AGTTTTGGTGAAGGATAAGCA-------GACGG-CCTCTTCTGG-G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92659672 282 - 92844088 CCTGGGGAGAGTTGAAGCCAGTTAATGGTGTGTTGGCCGGGCTGTTACC-TTTTCTTCACCACACACAGTTTCTCCCTAAATAACCAATGGCTGCACCTCTCCCCTGCCCCCT-----GGAA--AGAGATTTCCTGAGGATCCAGTGGGAGGAGGCTGCTCCCACCCAGGCCTCAGGGTTTTCTTCCCCCTATTTCATCTCAGAAGAACCCCTGCTCCTGCTCATTTTCCCTTCCTAGAGCAGATCTGAGGGG----AGTTTTTGTGAAGGATGAGCA-------GACAG-CCTCCTCTGG-G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321510 282 + 96509753 CCTGGGGAGAGTTGAAGCCAGTTAATGGTGTGTTGGCCGGGCTGTTACC-TTTTCTTCACCACACACAGTTTCTCCCTAAATAACCAATGGCTGCACCTCTCCCCTGCCCCCT-----GGAA--AGAGGTTTCCTGAGGATCCAGTGGGAGGAGGCTGCTCCCACCCAGGCCGCAGGGTTTTCTTCCCCCTATTTCATCTCAGAAGAACCCCTGCTCCTGCTCATTTCCCCTTCCTAGAGCAGATCTGAGGGG----AGTTTTTGTGAAGGATGAGCA-------GACAG-CCTCCTCTGG-G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791341 282 - 16982598 CCTGGGGAGAGTTGAAGCCAGTTAATGGTGTGTTGGCTGGGCTGTTACC-TTTTCTTCACCACACACAGTTTCTCCCTAAATAACCAATGGCTGCACCTCTCCCCTGCCCCCT-----GGAA--AGAGGTTTCCTGAGGATCCAGTGGGAGGAGGCTGCTCCCACCCAGGCCGCAGGGTTTTCTTCCCCCTATTTCATCTCAGAAGAACCCCTGCTCCTGCTCATTTCCCCTTCCTAGAGCAGATCTGAGGGG----AGTTTTTGTGAAGGATGAGCA-------GACAG-CCTCCTCTGG-G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601036 282 - 3785965 CCTGGGGAGAGTTGAAGCCAGTTAATGGTGTGTTGGCCAGGCTGTTACC-TTTTCTTCACCACACACCGTTTCTCCCTAAATAACCAATGGCTGCACCTCTCCCCTGCCCCCT-----GGAA--AGAGGTTTCCTGAGGATCCAGTGGGAGGAGGCTGCTCCCACCCAGGCCGCAGGGTTTTCTTCCCCCTATTTCATCTCAGAAGAACCTCTGCTCCTGCTCATTTCCCCTTCCTAGAGCAGATCTGGGGGG----AGTTTTGGTGAAGGATGAGCA-------GACAG-CCTCCTCTGG-G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90224994 280 - 90373283 CCTGGGGAGAGTTGAAGCCAGTTAATGGTGTGTTGGCCGGGCTGTTACC-TTTTCTTCACCACACA--GTTTTTCCCTAAATAACCGATGGCTGTGCCTCTCCCCTGCCCCCT-----GGAA--AGAGGTTTCTGGAGGATCCAGTGGGAGGAGGCTGCTCCCACCCAGGCCGCAGGGTTTTCTTCCCCCTATTTCATCTCAGAAGAACCCCTGCTCCTGCTCATTTCCCCTTCCTAGAGTAGATCTGAGGGG----AGTTTTGGTGAAGGATGAGCG-------GACAG-CCTCCCCTGG-G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126649 282 + 156971 CCTGGGGAGAGTTGAAGCCAGTTAATGGTGTGTTGGCCGGGCTGTTACC-TTTTCTTCACCACACACCGTTTCTCCCTAACTAACCAATGGCTGCACCTCTCCCCTGCCCCCT-----GGAA--AGAGGTTTCCTGAGGATCCAGTGGGAGGAGGCTGCTCCCACCCAGGCCGCAGGGTTTTCTTCCCCCTATTTCATCTCAGAAGAACCCCTGCTCCTGCTCATTTCCCCTTCCTAGAGCAGATCTGAGGGG----AGTTTTGGTGAAGGATGAGCA-------GACGG-CCTCCTCTGG-G i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5477184 283 - 5823884 CCTGGGGAGAGTTGAGGCCAGTTAACGGTGTGTTGGCTGGGCTGTTACC-TTTTCTTCAGCACACACAGTTTCTCCCTAAATAACCGATGGCCGCACCTCTCCCCTGCCCCTG-----GAAA-GAGAGGTTTCCTGAGGATCCAGTGGGAGGAGGCTGCTCCCACCCAGGCTGCAGGGTTTTCTTTCCCCTAGTTCATCTCAGAAGAACCCCTGCTCCTGCTCATTTCCCCTTCCTAGAGCAGATCTGAGGGG----AGTGTTGATGAAGGATGAGCA-------GACAG-CCTCCTCTGG-G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128229 237 + 159171411 CCTGGGGAGGGCTGAAGCCGGTTAATGGTGCGT--GCCGGGCTCCTGCC-TT---TTCAGCACACAC----------------------GGCATC-CCCCTCCTCTGCCACCT-----GGAG--AGAGGTTCCCTGAGGATCCAGAGGGAGGGAGCTG---------------CAGGGTTTTCTTCCATCCATTTCGTCTCAGAAGAACTCATGCTCCTGCTCATTTCCCCTTCCTCGAGTGGATCTGAGGG------GTTTTGGTGACAGATGAGCA-------GACAG-CCTCCTCCGG-G i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16192921 261 + 16356641 CCTGGGGAGAGCTGAAGCTGGTTAATGGTGCAT--GCCGGGCTCCTGCC-TTTTCTTCAGCACACACAGTTTCTCCCTAAACAACCCAAGGCTTC-CCCCTCCCCTGCCCCCCTGAAGAGAG--AGAGGTTCCCTGAGGGTCCAGTGGGAGGGAGCTG---------------CAGGGTTTTCTTCCTCACATTTCGTCTCAGAAGAA------CTCTTGTTCATTTCCCCTTCCTTGAGCGGATCTGAGGG------GTTTTGGTGAAAGGTGAGCA-------GACAG-CCTCCTCTGG-G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1053876 262 + 1231380 CCTGGGGAGAGCTGAAGCCAGTTAATGGTGCGT--GCCGGGCTCCTGCC-TTTTCTTCAGCACAGACAGTTTCTCCCTAAACAACCAATGGCTTC-TCCCTCCCCTGCCCCCT---GGAGAG--AGAGGTTCCTGGAGGATCCAGTGGGAGGGAGCTG---------------CA-GGTTTTCTTCCCCACAGTTGGTCTCAGAAGAA-CGCTGCTTCTGCCCATTTCCCCTTCCTTGAGCGGATCTGAGGG------GTTTTGGTGAAAGGTGAGCA-------GACAG-CCTCCTCTGG-G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2593285 236 + 11732439 CCTGGGGAGAGCTGAAGCCGGTTAATGGTGCGT--GCCTGGCTCCTGCC-TTTTCTTCAGCACACGC----------------------GGTTT-----CTCCCCTGCCGCCT-----GGAG--AGAGGTTCCCTGAGGATCCAGTGGGAGGGAGCTG---------------CGGGGTTTTCTTCCCCCCATTTCATCTCAGAAGAACCCCTGCTCCTGCTCATTTCCCCTTCCTTGAGCGGATCTGAGGG------GTTTTGGTGAACGGTGAGCA-------GACAG-CTTCCTCCGG-G i aotNan1.NW_018500483v1 I 7 C 0 s otoGar3.GL873542 22760264 239 + 22939663 CC--AGGAGGGGTGAGTCCCGCTCATGGTGAGCT-----GGCTGCCACA-TTTTTTTCAGCACAAATTGTTTCTCCCTAAACAACCAAATGCTGTGACTCTTTCTTGCCCTCT-----GGGA--AGA--------GAGAATCCTGTAGG-----TCTG----------------TGAGTCTTC--------ATTCAGTCTCAGCAGAAGTCCCACCCCTGACCATTTCCCCTTTCTCCAGCAGGTCCACGGAG----ACCTCTGGTGAAAAATGAACA-------GAATG-GTCCCACTGGAG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181721125 197 + 182113224 TATGGGAGG----GAAACTATTTCCTGG---GTTGCAGAGGCTGCTGCC-TTTCCTTC---------------TCCCAAGACA----ATGACCATCTTTTCTTCCCACCCTCA-----GGGA--------------------CAGTGGGTAAATGC--------------------------CTTCACAGCTTTTCTTTGTAGA----------CTCTTGCCTTTT-----------GAGCAAATCTAAAAGGATAAAAGGATGGTGATAACAGAGCA-------GAGAACCCTTCTCTGGTG i mm10.chr2 I 2 C 0 s dasNov3.JH569290 179208 174 - 397369 ------------------------------------------------------------------------------------TCGGGGGCACGTTCTCTCACC--CCCCCG-----GGTG--------------------CAGTGGC----TGCTCCTCCCTGCTGGGCCAGGGGTTTTTCTCCACCCCATTTCGTCTCAGCAGAGCCCC--------CTGGCTCCACCTTCCTTGAGCTGCCCCCAGAAA----GGCTTCGGTGAAAGGTGGACAGTAACGGGACGG-CCTGCTCTGG-G i dasNov3.JH569290 C 0 I 86 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I a score=844531.000000 s hg38.chr20_KI270870v1_alt 6044 81 + 183433 GCTGGGTACACTCT---TGCCATGGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTTCAGCCCAGGCCGACCTGCAAAACAGA-------------- s panTro5.chr20 66307637 81 + 66533130 GCTGGGTACACTCT---TGCCATAGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTTCAGCCCAGGCCGACCTGCAAAACAGA-------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018321 81 + 62195757 GCTGGGTACACTCT---TGCCATAGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTTCAGCCCAGGCTGACCTGCAAAACAGA-------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407686 81 - 578057 GCTGGGTACACTCT---TGCCATAGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTTCAGCCCAGGGTGACCTGCAAAACAGA-------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109934033 83 - 110113093 GCTGGGCACACTCT---TGCCATGGACATCTCTGCCTCCTGTTTCCTGTTT-----GGCCCAGTTCAGCCCAGGCTGACCTGCAAAACAGA-------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92659954 81 - 92844088 GCTGGGCACACGCT---TGCCGTGGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTGCAGCCCAGGCTGACCTGCAAAACAGA-------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321792 81 + 96509753 GCTGGGCACACACT---TGCCGTGGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTGCAGCCCAGGCTGACCTGCAAAACAGA-------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791623 81 - 16982598 GCTGGGCACACACT---TGCCGTGGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTGCAGCCCAGGCTGACCTGCAAAACAGA-------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601318 81 - 3785965 GCTGGGCACACTCT---TGCCGTGGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTGCAGCCCAGGCTGGCCTGCGAAACAGA-------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90225274 81 - 90373283 GCTGGGCACACTCT---TGCCGTGGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTGCAGCCCAGGCTGACCTGCAAAACAGA-------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 126931 81 + 156971 GCTGGGCACACTCT---TGCCGTGGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTGCAGCCCAGGCTGACCTGCAAAACAGA-------------- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5477467 81 - 5823884 GCTGGGCACACTCT---TGCCATGGACA--TCTGCCTCCTGGTTCCTGTTT-----GGCCCAGTGCAGCCCAGGCTGACCTGCAAAACAGA-------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128466 81 + 159171411 GCTTGACACACTCT---TGTGATGGACA--TCTGCCTGCTGGCTCCTGTGT-----GGCCTGGTTCAGCCCAGGCTGACCTGCAAAAGAGA-------------- i calJac3.chr5 C 0 I 11 s saiBol1.JH378156 16193182 81 + 16356641 GCTGGGCACACTCT---TGTGATGGACA--CTTGCCTGCTGCTTCCTGTGT-----GGCCTGGTTCAGCCCAGGCTGACCTGAGAAACAGA-------------- i saiBol1.JH378156 C 0 I 13 s cebCap1.NW_016107870v1 1054138 81 + 1231380 GCTGGGCACACTCT---TGTGATGGCCA--TCTGCCTGCTGGTTCCTGTGT-----GGCCTGGTTCAGCCCAGGCTGACCTGCGAAACAGA-------------- i cebCap1.NW_016107870v1 C 0 I 13 s aotNan1.NW_018500483v1 2593521 81 + 11732439 GCTGGGCACATTCT---TGTGATGGACA--CCTGCCTGCCAGTTCCTGTGT-----GGTCTGGTTCAGCCCAGGCTGACCTGGGAAACAGA-------------- i aotNan1.NW_018500483v1 C 0 I 31 s otoGar3.GL873542 22760503 85 + 22939663 GCTGAGCAATCTCTCTCTATGATGGGGC--GTTGCCTTCTGGTTCCTGCCTG----GGTCCAATTCCACCCAGGTTGGCCTGACAGGTGGA-------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181721322 99 + 182113224 GCAGAGTGACCCTA---TACTATAGAGA--TCTACCTCCTGGCTCTTGTCTGTGTAGGCCCAATCTGGCTCAAGTTGACTCTC-AGGCAGATGGCCCTTGTCAGG i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=125892.000000 s hg38.chr20_KI270870v1_alt 6125 22 + 183433 GCAGCTT---TGGAGGGTGGGCACG s panTro5.chr20 66307718 22 + 66533130 GCAGCTT---TGGAGGGTGGGCACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018402 22 + 62195757 GCAGCTT---TGGAGGGTGGGCACG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407767 22 - 578057 GCAGCTT---TGGAGGGTGGGCACG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109934116 25 - 110113093 GTGGCTTTGGTGGGGGGGGGGCACG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92660035 22 - 92844088 GCAGCTT---TGGAGGGTGGGCACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321873 22 + 96509753 GCAGCTT---TGGAGGGTGGGCACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791704 22 - 16982598 GCAGCTT---TGGAGGGTGGGCACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601399 22 - 3785965 GCAGCTT---TGGAGGGTGGGCACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90225355 22 - 90373283 GCAGCTT---TGGAGGGTGGGCACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 127012 22 + 156971 GCAGCTT---TGGAGGGTGGGCACC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5477548 22 - 5823884 GCAGCTT---TGGAGGGTGGGCACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128558 18 + 159171411 GAGGCTA---TGGAGGGGCAT---- i calJac3.chr5 I 11 C 0 s saiBol1.JH378156 16193276 18 + 16356641 GAGGCTG---TGGAGGGTAAT---- i saiBol1.JH378156 I 13 C 0 s cebCap1.NW_016107870v1 1054232 18 + 1231380 GAGGCTG---TGGAGGGGCAT---- i cebCap1.NW_016107870v1 I 13 C 0 s otoGar3.GL873542 22760588 21 + 22939663 -CGACTC---TGTCAGATGGGCTTG i otoGar3.GL873542 C 0 I 12 s mm10.chr2 181721421 17 + 182113224 GGGCCTT---TGAAGAGTGT----- i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e aotNan1.NW_018500483v1 2593602 31 + 11732439 I a score=568203.000000 s hg38.chr20_KI270870v1_alt 6147 66 + 183433 GGCACACTCCAGTCCAAGTACTCGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGATTTTC s panTro5.chr20 66307740 66 + 66533130 GGCACACTCCAGTCCAAGTACTCGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGATTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018424 66 + 62195757 GGCACACTCCAGTCCAAGTACTCGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGATTTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407789 66 - 578057 GGCACACTCCAGTCCAAGTACTCGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGATTTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109934141 66 - 110113093 AGCACACTCCAGTCCAAGTACTTGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGGTTTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92660057 66 - 92844088 GGCACACTCCAGTCCAAGCGCTTGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGGTTTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321895 66 + 96509753 GGCACACTCCAGTCCAAGCGCTTGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGGTTTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791726 66 - 16982598 GGCACACTCCAGTCCAAGCGCTTGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGGTTTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601421 66 - 3785965 GGCACACTCCAGTCCAAGCGCTTGTCTCCAGGGCATGGGCAGATGGG------------------TAAGTTCT--------------GTAGGGTTTTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90225377 66 - 90373283 GGCACACTCCAGTCCAAGTGCTTGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGGTTTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 127034 66 + 156971 GGCACACTCCAGTCCAAGCGCTTGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGGTTTTA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5477570 66 - 5823884 GGCACACTCCAGGCCAAGGGCTTGTCTCCAGGGCATGGGCAGATGGG------------------CAAGTTCT--------------GTAGGGTTTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128576 52 + 159171411 GGCACACTCCAGTCCACGTGCTTCTCTCTAGGGCAC--------------------------------ATTCT--------------GCAGGGTTTTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16193294 52 + 16356641 GGCACACTCCAGTCCAAGTGCTTGTCTCTAGGGCAC--------------------------------ATTCT--------------GCAGGGTTTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1054250 52 + 1231380 GGCACACTCCAGTCCAAGTGCTTGTCTCTAGGGCAC--------------------------------ACTCT--------------GCAGCGTTTTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2593633 52 + 11732439 GGCACACTCCAGTCCAAGCGCTTGTGTCTAGGGCAC--------------------------------ATTCT--------------GCAGGGTTTTA i aotNan1.NW_018500483v1 I 31 C 0 s otoGar3.GL873542 22760621 98 + 22939663 GGTGTGCTCAGGTCAAAGTGCTTGTCTGCAGGGCATAGGCAGATGGGTCAGTGTCTGGCTGTGGCCAAGttttttttttttttagagacagagtctta i otoGar3.GL873542 I 12 I 207 s mm10.chr2 181721438 56 + 182113224 ------CTTATGTGCCAAACCTTGCTTCCAGTAC-TGGGTTAGTGAG------------------CCAATGCT-----------------TGGTTTTA i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=1172285.000000 s hg38.chr20_KI270870v1_alt 6213 122 + 183433 TGTAGGTTTGAATGACAGACACtgtc------ttatcctggactgctatagcaaagtaccatagactcagtggcaatagagacatcagatgtttatttctcatggttctggaggctggagatctgaga s panTro5.chr20 66307806 122 + 66533130 TATAGGTTTGAATGACAGACACtgtc------ttatcctggactgctatagcaaagtaccatagactcagtggcaatagagacatcagatgtttatttctcatggttctggaggctggagatctgaga i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018490 122 + 62195757 TATAGGTTTGAATGACAGACACtgtc------ttatcctggactgctatagcaaagtaccatagactcagtggcaatagagacatcagatgtttatttctcatggttctggaggctggagatctgaga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407855 122 - 578057 TATAGGTTTGAATGACAGACACtgtc------ttatcctggactgctatagcaaagtaccatagactcagtggcaatagagacatcagatgtttatttctcatggttctggaggctggagatctgaga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109934207 120 - 110113093 TATAGGTTTGAATGACAGACACtgtc------ttatcctggactgctatagcaaagtaccatagactcagtggcaatagagacagcagacgtttgtttctcatggttctggaggctggaga--tgaga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92660123 122 - 92844088 TATAGGTTTGAATGACGGACACtgtc------ttatcctggactgctgtagcaaagcaccatagatccaatggcaatagaaacaacagacgtttatttctcacggttctgggggctggggatcagaga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96321961 122 + 96509753 TATAGGTTTGAATGACGGACACtgtc------ttatcctggactgctgtagcaaagcaccatagatccaatggcaatagaaacaacagacgtttatttctcacggttctgggggctggggatcagaga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791792 122 - 16982598 TATAGGTTTGAATGACAGACACtgtc------ttatcctggactgctgtagcaaagcaccatagatccaatggcaatagaaacaacagacgtttatttctcacagttctgggggctagggatcagaga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601487 121 - 3785965 TATAGGTTTGAATGACAGACACtgtc------ttatcctggactgctgtagcaaagcaccatagatccaatggcaatagaaacaacagacgtttatttctcacggttct-gggactggggatcagaga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90225443 122 - 90373283 TATAGGTTTGAATGACAGACACtgtc------ttatcctggactgctgtagcaaagcaccatagatccaatggcaatagaaacaacagacgtttatttctcacggttctggaggctggagatcagaga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 127100 122 + 156971 TACAGGTTTGAATGACAGACACtgtc------ttgtcctggactgctgtagcaaagcaccatagatccaatggcaatagaaacaacagacgtttatttctcacggttctggaggctggggatcagaga i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5477636 122 - 5823884 TATAGGTTTGAATGACAGACACtgtc------ttatcctggacggctgtagcaaagtaccatagatccaatggcaacagaaacaacagacgtttatttctcatggttctggagactggagatcagaga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128628 116 + 159171411 TGCAGGTTTGAATGACAGGCACTGTC------TTCTCCTggactgctata-----gcaccacagacccagggac-acagaaacagtacacatttattcctcagagctgtggaggctggaggtctgaga i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16193346 121 + 16356641 TACAGGTTTGAATTACAGGCACTgtc------ttctcctggactgctgtagcaaggcaccacagaccgagggac-atagaaacagtacacgtttattcctcagagccatggaggctggaggtctggga i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1054302 118 + 1231380 TACAGGTTTGAATGGCAGGCACTgtc------tt---ctggactgctgtagtgaggcaccacagacccagggac-ctagaaacagtacacgtttatttctcagagctgtggaggctggaggtctgagg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2593685 121 + 11732439 TACAGGTTTGAATGGCAGGCACTGTC------TTCTCCTgggctgctgtagtgaggcaccacagacccagggat-gcagaaacagtacacgtttattcctcagagctgtggaggctggaggtctgaga i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22760926 120 + 22939663 TATAAGTTTTAAGGACGGACACtgtc------ttatcctgg-ctgccataacaaaacaccatagaccaggaggc-tcataaacagcaaacatttatttctcactgttctggaggctggaagcctgagg i otoGar3.GL873542 I 207 C 0 s mm10.chr2 181721494 109 + 182113224 TACAAGTTTTAATGA----CACTGTCCATTTGTTTTTTTGTTTTGTTTTAGTCT-----------CTCAGT----TTATAAGCAATAGATATGAATTTCTCACAGGCTTAAAAGATGCAGGTGTGATG i mm10.chr2 C 0 I 97 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=988213.000000 s hg38.chr20_KI270870v1_alt 6335 131 + 183433 tcaggtgcagg--cacggtcaggttccggggaagacccgctcccaggctgcagagggccatcttctcactatgtcatgacatgggtttgacagctggagagcgtgcc-tttcctaaaggcactcatcccattca s panTro5.chr20 66307928 130 + 66533130 tcaggtgcagg--cacggtcaggtt-cggggaagacccgctcccaggctgcagagggccatcttctcactatatcatgacatgggtttgacagctcgagagcgtgcc-tttcctaaaggcactcatcccattca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018612 131 + 62195757 tcaggtgcagg--cacggtcaggttccggggaagacccgctcccaggctgcagagggccatcttctcactatatcatgacatgggtttgacagctcgagagcgtgcc-tttcctaaaggcactcatcccattca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 407977 131 - 578057 tcaggtgcagg--cacggtcaggttccggggaagacccactcccaggctgcagagggccatcttctcactatatcatgacatgggtttgacagctcgagagtgtgcc-tttcgtaaaggcactcatcccattca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109934327 130 - 110113093 tcaggtgcagg--cacggtcgggttccgggg-agacccgctcccgggctgcagacggtcatcttctcactgtatcatgacatgggtttgacagctcgagagtgtccc-tttcctaaaggcactcatcccattcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92660245 128 - 92844088 tgaggtgcaggcacacagtcaggttctgggaaagac-----cccaggccgtagagggccgtcttctcactatgtcatgacatgggtttgagagctcaagagcatctg-gttcctaaaggcactcatccctttca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96322083 128 + 96509753 tgaggtgcaggcacacagtcaggttctgggaaagac-----cccaggccgtagagggccgtcttctcactatgtcatgacatgggtttgagagctcaagagcatctg-gttcctaaaggcactcatccctttca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16791914 126 - 16982598 tgaggtgcagg--cacagtcaggttctgggaaagac-----cccaggccctagagggccgtcttctcactatgtcatgacatgggtttgagagctcaagagcatctg-gttcctaaaggcactcatccctttca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601608 126 - 3785965 tgaggtgcagg--cacagtcaggttctgggaaagac-----cccaggccgtagagggccgtcttctcactatgtcatgacatgggtttgagagctcaagagcatctg-gttcctaaaggcactcatccctttca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90225565 126 - 90373283 tgaggtgcagg--cacagtcaggttctgggaaagac-----cccaggccgtagagggccgtcttctcactatgtcatgacatgggtttgagagctcaagagcgtctg-gttcctaaagacactcatccctttca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 127222 126 + 156971 tgaggtgcggg--cacagtcaggttctgggaaagac-----cccaggccgtagagggccgtcttctcactatgtcatgacatgggtttgagagctcaagagcatctg-gttcctaaaggcactcatccctttca i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5477758 131 - 5823884 tgaggtgcagg--cacagtcaggttctgggagagacccgctcccaggccgtagagggccgtcttctcactatatcatgacatgggtttgagagctcgagagcgtctg-tttcctaaaggcactcatcccattca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128744 121 + 159171411 tcaggtgcagg--cat-gtcgggttctggggaagacccgc-ctcaggctg--------catcttctca-tatctcatgccatgggtttgagagctcgagaggatccctttttctaagggcactcatcccatttg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16193467 121 + 16356641 ccaggtgcagg--cat-gtcgggttctggggaagacctgc-cccaggctc--------catcttcttg-tatatcatgccatgggtttgcgagctccagagcatcccttttcctaagggcactcatcccattcg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1054420 120 + 1231380 ccaggtgcagg--cga-gtcgggttct-gggaagacccgc-cccaggctg--------catcttctca-tgtctcatgccatgggtttgacagctcgagagcatccctttttctaagggcactcatcccattcg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2593806 120 + 11732439 tcaggtgcagg--cct-gtcgggttctggggaagacccgc-cccaggctg--------catcttctca-tatctcatg-catggctttgaaagctcgagagcatccctttttctaagggccctcatcccattcg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22761046 101 + 22939663 ttagg-gcatgtgtgtagtcaggccctggggacagctgcc-cccaacttgcagagagctgtcttctcactgtgtccCTTAATGAGT----------------------GTCCcta---------atcccatgca i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181721603 97 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=1462996.000000 s hg38.chr20_KI270870v1_alt 6466 152 + 183433 ggagggctctgccgtcatgacctg-----tcatctcccaaag---------------------------------------------------------gcccccct-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-gggggc---------------------------------------------------------------------------------tgagatttcaaaatgcaaattt---------------t-ggaggaacacaaatagttcaTAACAAACACATTGCCATCAAAGCAAAAATATAGCATC s panTro5.chr20 66308058 152 + 66533130 ggagggctctgccgtcatgacctg-----tcatctcccaaag---------------------------------------------------------gcccccct-----------------------------------------gtcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-gggggc---------------------------------------------------------------------------------tgagatttcaaaatgcaaattt---------------t-ggaggaacgcaaataattcaTAATAAACACATTGCCATTAAAGCAAAAATTTAGCATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018743 152 + 62195757 ggagggctctgccgtcatgacctg-----tcatctcccaaag---------------------------------------------------------gcccccct-----------------------------------------gtcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-gggggc---------------------------------------------------------------------------------tgagatttcaaaatgcaaattt---------------t-ggaggaacgcaaataattcaTAATAAACACATTGCCATTAAAGCAAAAATTTAGCATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408108 152 - 578057 ggagggctctgccgtcatgacctg-----tcatctcccaaag---------------------------------------------------------gcccccct-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-gggggc---------------------------------------------------------------------------------tgagatttcaaaatgcaaattt---------------t-ggaggaacacaaatagttcaTAACAAACACATTGCCATTAAAGCAAAAATTAAGCATC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109934457 152 - 110113093 ggagggttccgccatcatgacctg-----tcatctcccaaag---------------------------------------------------------gcccctct-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-gggggc---------------------------------------------------------------------------------tggggtttcaaaatgcaaattt---------------t-ggaggaacacaaatagttcataacaaacacattgcCATTAAAGCAAAAATTTAGCATC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92660373 151 - 92844088 ggaggactctgccgtcatgacctg-----tcatctcccaaag---------------------------------------------------------gccccctt-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-ggggg----------------------------------------------------------------------------------tgggatttccaaatacgaattt---------------t-ggaggaacacaaatagttcataacaaacacattgcCATTAAAGCAAAAATTTAGCATC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96322211 151 + 96509753 ggaggactctgccgtcatgacctg-----tcatctcccaaag---------------------------------------------------------gccccctt-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-ggggg----------------------------------------------------------------------------------tgggatttccaaatacgaattt---------------t-ggaggaacacaaatagttcaTAACAAACACATTGCCATTAAAGCAAAAATTTAGCATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792040 151 - 16982598 ggaggactctgccgtcatgacctg-----tcatctcccaaag---------------------------------------------------------gccccctt-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-ggggg----------------------------------------------------------------------------------tgggatttccaaatacgaattt---------------t-ggaggaacacaaatagttcataacaaacacattgcCATTAAAGCAAAAATTTAGCATC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601734 151 - 3785965 ggaggactctgccgtcgtgacctg-----tcatctcccaaag---------------------------------------------------------gccccctt-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-ggggg----------------------------------------------------------------------------------tgggatttcaaaatacgaattt---------------t-ggaggaacacaaatagtccataacaAACACATTGCCATTAAAGCAAAAATTTAGCATC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90225691 151 - 90373283 ggaggactctgccgtcatgacctg-----tcatctcccaaag---------------------------------------------------------gccccctt-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-ggggg----------------------------------------------------------------------------------tgggatttcaaaatacgaattt---------------t-ggaggaacacaaatagttcaTAACAAACACATTGCCATTAAAGCAAAAATTTAGCGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 127348 151 + 156971 ggaggactctgccgtcatgacctg-----tcatctcccaaag---------------------------------------------------------gccccctt-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-ggggg----------------------------------------------------------------------------------tgggatttcaaaatacgaattt---------------t-ggaggaacacaaatagtccataacaAACACATTGCCATTAAAGCAAAAATTTAGCATC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5477889 151 - 5823884 ggaggactccgcggtcatgacctg-----tcatctcccaaag---------------------------------------------------------gccccctt-----------------------------------------ctcctgat-------------------------------------------------------------------------------------------accatca-----gcttg-gcggg----------------------------------------------------------------------------------tgggatttcaaaatacgaattt---------------t-ggaggaacacaaatagctcataacaAACACATTGCCATTAAAGCAAAAATTTGGCATC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58128865 151 + 159171411 ggagggctctgctgtcatgacctg-----tcacctcccaaag---------------------------------------------------------g--cccct-----------------------------------------ctcctggt-------------------------------------------------------------------------------------------accatca-----ccttt-ggggggt--------------------------------------------------------------------------------tgggatttcaaaatacaaattt---------------t-ggaggaacgcaaatagtccataacaAACACATTGTCATTAAAGCAAAGATTTAGCATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16193588 152 + 16356641 gaagggctctgcggtcatgacctg-----tcacctcccaaag---------------------------------------------------------g-ccccct-----------------------------------------ctcctagt-------------------------------------------------------------------------------------------accatca-----ccttt-gggggct--------------------------------------------------------------------------------tgggatttcaaaatacaaattt---------------t-ggaggaacgcaaatagtcTGTAACAAACACATTGCCATTAAAGCAAAGCTTTAGCATC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1054540 152 + 1231380 gaagggctctgacgtcatgacctg-----tcaccgcccaaag---------------------------------------------------------g-cccctt-----------------------------------------ctcctggt-------------------------------------------------------------------------------------------accatca-----ccttt-gggggct--------------------------------------------------------------------------------tgggatttcaaaatacaaattt---------------t-ggaggaacgcaaacagtccataacaAACACATTGCCATTAAAGCAAAGATTTAGCATC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2593926 153 + 11732439 ggagggctctgccgtcatgacctg-----tcacctcccaaag---------------------------------------------------------g-ccccct-----------------------------------------ctcctggt-------------------------------------------------------------------------------------------accatca-----cctttgggggggt--------------------------------------------------------------------------------tgggatttcaaaatacaaattt---------------t-ggaggaatgcaaatagtccataacaAACACATTGCCATTAAAGCAAAGATTTAGCATC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22761147 431 + 22939663 agaggggtctaccctcatggtctaatgccccacctcctaatgccctcaaattagagaatttctttctttttttttttttttgagacagagcctcaagctgtccccctgggtagagtgctgtgacatcacagctcacagcaacctccaactcctggtctcaagtgagtctcctgcctttgcctcccaagtagctgggaccacaggcgcccgccacaatgccccgccattttttttttttttggttgcagccatcattgttgtttg-gtggcccgggctggattcgaagctgccaccttaggtgtatgtgtctggtgccttagccacttgagccacaggtgctgagccaaattagaggatttcaatgtataaattt---------------tgggggggacacaagtagtcTGTAAAAGACATAGTGCTGTTACAACAAAAATTTAGCA-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181721700 162 + 182113224 ATagggtttcaacctcacaaccta-----ttcccatagcaaa---------------------------------------------------------gtcac--------------------------------------------ctcataac-------------------------------------------------------------------------------------------accatca-----cattg-gggga----------------------------------------------------------------------------------taggatttcaaaatgtgagtGTGAATGTGTGTGTTTAT-ACAAGCACACCAGTAGTTCTTAGCAAACACATTAGT-TTCAAACAGAAATTCAGCAtc i mm10.chr2 I 97 I 158 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=549985.000000 s hg38.chr20_KI270870v1_alt 6618 54 + 183433 AAGGGACAATTTGGGAGGGAGAG----GCTGCACCGGGGCAGTTACTGTGCCCTTGGG s panTro5.chr20 66308210 54 + 66533130 AAGGGACAATATGGGAGGGAGAG----GCTGCACCGGGGCAGTTACTGTGCCCTTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018895 54 + 62195757 AAGGGACAATATGGGAGGGAGAG----GCTGCACCGGGGCAGTTACTGTGCCCTTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408260 54 - 578057 AAGGGACAATATGGGAGGGAGAG----GCTGCACCGGGGCACTTACTGTGCCCTTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109934609 54 - 110113093 GAGGGACAATTTGGGAGGGACAG----GCTGCACCGGGGCTGTTACCGTGCCCTTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92660524 54 - 92844088 AAGGGACAATTTGGGAGGGACAG----GCTGCACCGGGGTAGTCACCGTGCCCTTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96322362 54 + 96509753 AAGGGACAATTTGGGAGGGACAG----GCTGCACCGGGGTAGTCACCGTGCCCTTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792191 54 - 16982598 AAGGGACAATTTGGGAGGGACAG----GCTGCACCGGGGTAGTCACCGTGCCCTTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601885 54 - 3785965 AAGGGACAATTTGGGAGGGACAG----GCTGCACCGGGGTAGTCACCGTGCCCTTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90225842 54 - 90373283 AAGGGACAATTTGGGAGGGACGG----GCTGCACCGGGGTAGTCACCGTGCCCTTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 127499 54 + 156971 AAGGGACAATTTGGGAGGGACAG----GCTGCACCGGGGTAGTCACCGTGCCCTTGGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5478040 54 - 5823884 AAGGGACAATTTGGGAGGGACAG----GCTGCACCGGGGTAGTTACCCTGCCCTTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129016 52 + 159171411 -AGGGACGATTTGGGAGGGACAG----GCTGCACC-GGGCAGGTGCCGTGCCCTTGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16193740 53 + 16356641 -AGGGACGATTTGGGAGGGACTG----GCTGCACCAGGGCAGGCACCGTGCCCTTGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1054692 53 + 1231380 -AGCGACAATTTGGGAGGGACAG----GCTGCACCAGGGCAGGTACCGTGCCCTTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2594079 53 + 11732439 -GGGGACGATTTGGGAGGGACAG----GCTGCACCGGGGCAGGTACCGTGCCCTTGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22761578 49 + 22939663 -------AATTTGGGAGAGGTAGATAAGCTGCA-TGGGGCAG-CACAGTGCCTGTGGG i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181721862 158 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=4212897.000000 s hg38.chr20_KI270870v1_alt 6672 494 + 183433 CCCGGGAGATGGTATGGTCTTGGTAGAGGAGGCTCACACATGGTG----------CGGACTGTCCTGTCTTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCTGGCCAGACAGGGGCCAAGGGCCGTAGGAGGAGTTGGGGGGCGTTGGAAGCTGAC-TAGCTCCCTTGCCC-TCCAGGACTGGGTTCCACCCCGGCCCACTCCACCCCTCCTCTGACCGCACCCTGGGTCTCCTCTCCAG-CCcccggctcccccagcccacctctgctgtcgggcttggtcaagtcgcctggcttttctgagcctcggtttccttccgtgtgcaaaggggaccgcagaaccctctttgtggggttgtGGGGGAAGGCTGG------GGCGCCCGGGAGGGTCCCGGGTCGCGTCCGACCTCAGGAAGGCGGGGCTTCAGCAGCGGCCTCGGAC-CCTCCCTCCAGGGGGCGCTGTGG-GCTCACGCGGGCCCAGCCTTGG s panTro5.chr20 66308264 494 + 66533130 CCCGGGAGATGGTATGGTCTTGGTAGAGGAGGCTCACACATGGTG----------CTGACTGTCCTGTCTTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCTGGCCAGACAGGGGCCAAGGGCCGTAGGAGGAGTTGGGGGGCGTTGGAAGCTGAC-TAGCTCCCTTGCCC-TCCAGGACTGGGTTCCACCCCGGCCCACTCCACCCCTCCTCTGACCGCACcctgggtctcctctccag-cccccggctcccccaacccacctctgctgtcgggcttggtcaagtcgcctggcttttctgagcctcagtttccttccgtgtgcaaaggggagcgcagaaccctctttgtggggttgtGGGGGAAGGCTGG------GGCGCCCGGGAGGGTCCCGGGTCGCGTCCGACCTCAGGAAGGCGGGGGTTCAGCAGCGGCGTCGGAC-CCTCCCTCCAGGGGGCGCTGTGG-GCTCACGCGGGCCCAGCCTTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62018949 494 + 62195757 CCCGGGAGATGGTATGGTCTTGGTAGAGGAGGCTCACACATGGTA----------CTGACTGTCCTGTCTTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCTGGCCAGACAGGGGCCAAGGGCCGTAGGAGGAGTTGGGGGGCGTTGGAAGCTGAC-TAGCTCCCTTGCCC-TCCAGGACTGGGTTCCACCCCGGCCCACTCCACCCCTCCTCTGACCGCACcctgggtctcctctccag-cccccggctcccccaacccacctctgctgtcgggcttggtcaagtcgcctggcttttctgagcctcagtttccttccgtgtgcaaaggggagcgcagaaccctctttgtggggttgtGGGGGAAGGCTGG------GGCGCCCGGGAGGGTCCCGGGTCGCGTCCGACCTCAGGAAGGCGGGGGTTCAGCAGCGGCGTCGGAC-CCTCCCTCCAGGGGGCGCTGTGG-GCTCACGCGGGCCCAGCCTTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408314 490 - 578057 CCCGGGAGATGGTATGGTCTTGGTAGAGGAGGCTCACACATGGTG----------CTGACTGTCCGGTCTTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAACTGGCCAGACAGGGGCCAAGGGCCGTAGGAGGAGTTGGGGGGCGTTGGAAGCTGAC-TAGCTCCCGTGCCC-TCCAGGACTGGGTTCCACCCCGGCCCACTCCACCCCGCCTCCGGCCGCACcctgggtctcctctccag-cccccggctcccccaacccacctctgctgtcgggcttggtcaagtcgcctggcttttctgagcctcagtttccttccgtgtgcaaaggggaccgcagaaccctctttgtggggttgtGGGGGAAGGCTGG------GGCGCCCGGGAGGGTCCCGGGTCG----CGACCTCAGGAAGGCGGGGGTTCAGCAGCGGCGTCGGAC-CCTCCCTCCAGGGGGCGCTGTGG-GCTCACGCGGGCCCAGCCTTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109934663 478 - 110113093 CCCGGGAGACGGTATGGCCGTGGTAGAGGAGGCTCACACGTGGTG----------CTGACTGTCCTGTCTTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCTGGCCAGACAGGGGCCAAGGGCCGTAGGAGGAGGTGCGGGGCGTTGGAGGCTGAC-TAGCTCCCGTACCC-TCCAGGACTGGGTTCCA----------------CCCTCCTCTGACAGCACCCTGGGTCTCCTCTCCAG-CCCCCGGCTCCCCAGACCCACCTCTGCTTTtgggcttggtcaagtcgcctggcttttctgagcctcagtttccttccgtgtgcaaaggggaccgccgaaccctctttgtggggttgtGGGGGAAGGCTGG------GGCGCCCGGGAGGGTCCCGGGTCCTGTCCGACCTCAGGAAGGCCGGGGTTCAGCAGCGGCGTCGGAC-CCTCCCGCCAGGGGGCGCTGTGG-GCTCACGCGGGCCCAGCCTTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92660578 454 - 92844088 CCCGGGAGATGGTGTGGGCTTGGTGGAAGAGGCTCACACGTGGTG--------------CTGTCCTGTCCTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCCGGCCAGAC--GGGCCAGG-GCTGGAGGAGGAGTTGGGGGGTGTTGGAGGCTGAC-CAGCTCCCTCGCTC-TCC-----------CCACC------------------CCTCTGACCACACCCTGGGTCTCCTCTCCAGCCCcccggctcccccaacccacctctgctgttgggcttggtcaagtcgcctggcttttctgagcctcagttaacttccctgtgcacaggggaccgcagaaccctctttgtggggttgtggggaACGGCTGG------GGCGCCCGGGAGGGT-CCGGGTCCCGTC---CCGCAGGGAGGC-GGGGTTCAGCGGCGGCGTCGGAC-CCTCCCGCCAGGGGGCGCTGTGG-GCTCGGGCGGGCCCAGCCTTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96322416 453 + 96509753 CCCGGGAGATGGTGTGGGCTTGGTGGAAGAGGCTCACACGTGGTG--------------CTGTCCTGTCCTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCCGGCCAGAC--GGGTCAGG-GCTGTAGGAGGAGTTGGGGGGTGTTGGAGGCTGAC-CAGCTCCCTCGCTC-TCC-----------CCACC------------------CCTCTGACCACACCCTGGGTCTCCTCTCCAGCCCcccggctcccccaacccacctctgctgttgggcttggtcaagtcgcctggcttttctgagcctcagttaacttccctgtgcacaggggaccgcagaaccctctttgtggggttgtggggaACGGCTGG------GGCGCCCGGGAGGGT-CCGGG-TCCGTC---CCGCAGGGAGGC-GGGGTTCAGCGGCGGCGTCGGAC-CCTCCCGCCAGGGGGCGCTGTGG-GCTCGGGCGGGCCCAGCCTTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792245 452 - 16982598 CCCGGGAGATGGTGTGGGCTTGGTGGAAGAGGCTCACACGTGGTG--------------CTGTCCTGTCCTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCCGGCCAGAC--GGGCCAGG-GCTGTAGGAGGAGTTGGGGGGTGTTGGAGGCTGAC-CAGCTCCCTCGCTC-TCC-----------CCACC------------------CCTCTGACCACACcctgggtctcctctccag-cccccggctcccccaacccacctctgctgttgggcttggtcaagtcgcctggcttttctgagcctcagttaacttccctgtgcacaggggaccgcagaaccctctttgtggggttgtggggaACGGCTGG------GGCGCCCGGGAGGGT-CCGGT-CCCGTC---CCGCAGGGAGGC-GGGGTTCAGCGGCGGCGTCGGAC-CCTCCCGCCAGGGGGCGCTGTGG-GCTCGGGCGGGCCCAGCCTTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3601939 453 - 3785965 CCCGGGAGATGGTGTGGGCTTGGTGGAAGAGGCTCACACGTGGTG--------------CTGTCCTGTCCTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCCGGCCAGAC--GGGCCAGG-GCTGTAGGAGGAGTTGGGGGGTGTTGGAGGCTGAC-CAGCTCCCTCGCTC-TCC-----------CCACC------------------CCTCTGACCACACCCTGGGTCTCCTCTCCAG-CCcccggctcccccaacccacctctgctgttgggcttggtcgagtcgcctggcttttctgagcctcagttaacttccctgtgcacaggggaccgcagaaccctctttgtggggttgtggggaACGGCTGG------GGCGCCCGGGAGGGT-CCGGGTCCTGCC---CCGCAGGGAGGC-GGGGTTCAGCGGCGGCGTCGGAC-CCTCCCGCCAGGGGGCGCTGTGG-GCTCGGGCGGGCCCGGCCTTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90225896 444 - 90373283 CCCGGGAGATGGTGTGGGCTTGGTGGAAGAGGCTCACACGTGGTG--------------CTGTCCTTTCCTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCCGGCCAGACGGGGGCCAAG-GCTGTAGGAGGAGCTGGGGGGTGTTGGAGGCTGAC-CAGCTCCCTCGCTC-TCC-----------CCACC------------------TCTCTGACCACACCCTGGGTCTCCTCtccgg-cccccggctcccccaacccacctctgctgttgggcttggtcaagtcgcctggcttttctgagcctcagttaacttccctgtgcacaggggaccgcagaaccctctttgtggggttgtggggaACGGCTGG------GGCGCCCGGGAGG------------GTC---CCGCAGGGAGGC-GGGGTTCGGCGGCGGCGTCGGAC-CCTCCCGCCAGGGGGCGCTGTGG-GCTCGGGCGGGCCCAGCCTCGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 127553 453 + 156971 CCCGGGAGATGGTGTGGGCTTGGTGGAAGAGGCTCACACGTGGTG--------------CTGTCCTGTCCTCGGGTAGGTGTGGATCCAGGCCTAA-GCCCACAGCTAGTGTCTTCCAGAAGGAGCCGGCCAGAC--GGGCCAGG-GCTGTAGGAGGAGTTGGGGGGTGTTGGAGGCTGAC-CAGCTCCCTCGCTC-TCC-----------CCACC------------------CCTCTGACCACACcctgggtctcctctccag-cccccggctcccccaacccacctctgctgttgggcttgggcaagtcgcctggcttttctgagcctcagttaacttccctgtgcacaggggaccgcagaaccctctttgtggggttgtggggaACGGCTGG------GGCGCCCGGGAGGGT-CCGGGTCCCGTC---CCGCAGGGAGGC-GGGGTTCAGCGGCGGCGTCGGAC-CCTCCCGCCAGGGGGCGCTGTGG-GCTCGGGCGGGCCCGGCCTTGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5478094 461 - 5823884 CCCGGGAGATGGTGTGGGCTTGGTGGAAGAGGCTCACACGTGGTG--------------CTGTCCTATCCTCGGGTGGGTGTGGATCCAGGGCTAA-GCCCACAGCTAGTGTCGTCCAGAAGGAGCCAGCCAGACAGGGGCCAGGAGCCGTAGGAGGAGTTGCGGGGTGTTGGAGGCTGAC-CAGCTCCCTGGCTC-ACC-----------CCACC---------------CTTCTTCTGACCGCACcctgggtctcctctccag-cccccggctcccccagcccacctctgctgttgggcttggtcaagtcgcctggcttttctgagcctcagttaacttccctgtgcaaagaggacctcagaaccctctttgtggggttgtgggg-aCGGCTGG------GGCGTCCGGGAGGGT-CCGGGTCCTGTCCGACCGCAGAAGGCC-GGGGTTCAGCGGCGGCGTCGGAC-CCTCCCGCCAGGGGGCGCTGTGG-GCTCACGCGGGCCCAGCCTCGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129068 436 + 159171411 CCCAGGAGATGGAGTGCTCTTGGTGGAGGAGGCTCACGCGTGGGC-----------------CC--GTGT--GGGTGGGTGTGCATCCAGGGCTAATGCCCACAGCTAGTGTCTTCCAGAAGAAGCTGGCCAGGAAGGGGCCAGGGGCCGCAGGAAGGGTTG-GGGTCAGTGGAGGCTGAC-CAGCTCCCTTGCTT-TCcaggactgggt---------------------------------------------tcttctccag-cccctggctcgtccaacccacctctgctgttgggcttggtcgaatcgccaggcttttccgagcctcagtttccttccccgtgcaaaggggacagcagaaccctctttgt-gggttgtgggg-aaggctGG------GGTGCCCGCGAGGGTCCCGGGTCCTGTCCCGCCTCAGGAAGGCCCGGGGTCTGCAGCGGCGTCGGAC-CCTCCCGCCAGGGGACGCTGTGG-GCTCGCGCGGGCCCAGCCCTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16193793 461 + 16356641 CCCAGGAGATGGAGTGGTCTTGGTGGAGGAGGCTCACGCGTGGGC-----------------CCCTGTGT--GGGTGGGTGTGCATCCAGGGCTAACGCCCACAGCTAGTGTCTTCCAGAAGTAGCCGGCCCGGCAGGGGCCAGGGGCCGAAGGAGGAGTTG-GGGGCAGTGGCGGCTGAC-CAGCTCCCTTGCTT-TCCAGGACTGGGTTCCACC------------------CC----AGCGCGCCCTGGCTCTCCTCTGCAG-CCcccggctcgtccaacccacctctgctgttgggcttggtcgagtcgccaggcttttctgggcctcagtttccttccccgtgcaaaggggacagcagaaccctctttgc-gggttatgggg-aaggctGG------GGTGCCCGCGAGGGTCCCGGGTCCTGTCCCGCCTCAGGAAGGCCTGGGGTCTGCAGCGGCGTCGGAC-CCCCCCGCCAGGGGACGCTGTGG-GCTCGCGCGGGCCCAGCCCTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1054745 455 + 1231380 CCCAGGAGATGGAGTGGTCTTGGT---GGAGGCTCACGCGTGGGC-----------------CCCTGTGT--GGGCGGGTGTGCATCCAGGGCTAACGCCCACAGCTAGTGTCTTCCAGAAGGAGCCGGCCCGGCAGGGGCCAGGGGCCGCAGGA---GTTG-GGGGCGGTGGCGGCTGAC-CAGCTCCCTCGCTT-TCCAGGACTGGGTTCCACC------------------CC----AGCGCGCCCTGGCTCTCCTCTCCAG-CCcccggctcgtccaacccacctctgccattgggcttggtcgagtcgccaggcttttccgagcctcagtttccttccccgtgcaaagggaacagcagaaccctctttgt-gggttgtgggg-aaggctGG------GGTGCCCGCGAGGGTACCGGGTCCTGTCCCGCCTCAGGAAGGCCCAGGGTCTGCAGCGGCGTCGCAC-CCTCCCGCCAGGGGACGCTGTGG-GCTCGCGCGGGCCCAGCCCTGG i cebCap1.NW_016107870v1 C 0 I 35 s aotNan1.NW_018500483v1 2594132 460 + 11732439 CCCAGGAGATGGAGTGGTCTTGGGGGTGGAGGCTCACACGTGGGC-----------------CCCTGTGT--GGGTGGGTGTGCATCCAGGGCTAACGCCCACAGCTAGTGCCTTCCAGAAGGAGCAGGCCAGGCAGGGGCCAGGGGCCGCAGGAGGAGTTG-GGGGCGGTGGAGGCTGAC-CAGCTACCTTGCTT-TCCAGGACCGGGTTCCACC------------------CC----AGCGCGCCCTGGCTCTCCTCTCCAG-CCcccggctcgtccaacccacctctgctgttgggcttggtcgagtcgccaggcttttccgagcctcagtttccttccccgtgcaaaggggacagcagaaccctctttgt--ggttgtgggg-aaggctGG------GGTGCCCGCGAGGGTCCCGGGTCCTGTCCCGCCTCGGGAAGGCCCGGGGTCTGCAGCGGCGTCGGAC-CCTCCCGCCAGGGGACGCTGTGG-GCTCGCGCGGTCCCAGCCCTGG i aotNan1.NW_018500483v1 C 0 I 157 s otoGar3.GL873542 22761627 432 + 22939663 CTCA-------ATGTGGTCCTGGCCAAGGAGGTTCAAGTGTGTGGTCCTGGACTGCTGACCATCCTGCCATGG----GATGTGGGTCCAGAGCCAACACCCATAGCTAGCTTCTGCCAGTAGC--TAGGTCAGGCA-GGGCGAGAGGTCACCGGAGGGG----GGCTTCCCCAGGGCTG---TACCCCTTTGGCTCATCC-----------TCATC-------------------------TTGCTCCCT---CTTCCTCCCCAG--------------CACCCCTCCTctgtggctgggcttggtcaagtcatctagttcctctgagcctcagttttctcctgtgtgccaaggggaccgcacagccatc-ttgtggggttgtgggg-aaaactGG------GGGTATCCTTAGGACTTGGGGCCCTGTCCCACCTCAGGAAAGCCTGAGTCGGCTGGTGGCTTTGGAC-TCTGCCCACCAAGGGTGTGGTGG-CCCTGCATGTGCCCAGCTAAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181722020 410 + 182113224 CCCAGGAGATTGTATGATTCTGATAG-------------GTGGTG-------------------------------------GGATTCTGGGTTGCTGACCCTGGCCATTGTCTTTAAGGAGG--CTGGCCA--------TTAGG------------------GGAGCCTTAGAGATGAATATACCTCCCTGGCTC-TCCAGGACTATATACCTTC-------------CCCATTCTCTCTCCATTCTGTGTAACACAGCCTCAC-CCCTAAGTGTTTCTG-------TTTACTACCAGGcttgatcaagtctc---gtttctctgaatctgattttccttctctgtgcaaagggaaccacgcagccttcctcctggggttatgtga-agggcaggatgtataggatcaggtaggtccaagggtcttttt--aCCTCAGAAAAGGCAGGCTTCATCAGCTGCTTTAGGCACTTCCCACCAGAGGGCACTGTGGCCCTAATGTAGGCCCAGCCAAGG i mm10.chr2 I 158 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=439485.000000 s hg38.chr20_KI270870v1_alt 7166 80 + 183433 GCCCCGGGGCGCTGCGGCGGGAA-CCGCGGTGACTAGCGGGGTCTTAA-AGCGGGTGGCGGGGCCGGGCTCT-CCTGGGACCA s panTro5.chr20 66308758 81 + 66533130 GCCCCAGGGCGCTGCGGTGGGAA-CCGCGGTGACTAGCGGGGTCTTAA-AGTGGGTGGCGGGGCCAGGCTCTCCCTGGGACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019443 81 + 62195757 GGCCCAGGGCGCTGCGGTGGGAA-CCGCGGTGACTAGCGGGGTCTTAA-AGTGGGTGGCGGGGCCAGGCTCTCCCTGGGACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408804 80 - 578057 GCCTCAGGGCGCTGCGGCGGGAG-CCGCGGTGACTGGCGGGGTCTTAA-AGTGGGTGGCGGGGCCAGGCTCTCCCT-GGACCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935141 81 - 110113093 GCCCCAGGGCGCTGCGGTGGGAA-CCGCGGTGACTAGCGGGGTCTGAA-AGCGGGTGGCGGGGCCAGGCTCTCCCCGGGACCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661032 80 - 92844088 G-CCCAGGGCGCGGCGGTGGGAA-CCGCGGTGACCAGCGGGGTCCGAA-TGTGGGTGGCGGGGCCGGGCTGCCCCGGGGACCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96322869 80 + 96509753 G-CCCAGGGCGCGGCGGTGGGAA-CCGCGGTGACCAGCGGGGTCCGAA-TGTGGGTGGCGGGGCCGGGCTGCCCCGGGGACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792697 80 - 16982598 G-CCCAGGGCGCGGCGGCGGGAA-CCGCGGTGACCAGCGGGGTCCGAA-CGTGGGTGGCGGGGCCGGGCTGCCCCGGGGACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602392 80 - 3785965 G-CCCAGGGCGCGGCGGTGGGAA-CCGCGGTGACCAGCGGGATCCGAA-CGTGGGTGGCGGGGCCGGGCTGCCCCTGGGACCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226340 80 - 90373283 G-TCCAGGGCGCGGCGGTGGGAA-CCGCGGGGACCAGCGGGGTCCGGA-TGTGGGTGGCGGGGCCGGGCTGCCCCTGGGACCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128006 80 + 156971 G-CCCAGGGCGCGGCGGTGGGAA-CCGCGGAGACCAGCGGGGTCCGAA-CGTGGGTGGCGGGGCCGGGCTGCCCCTGGGACCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5478555 81 - 5823884 GCCCCAGGGCGCGGCGGTGGGAA-CCGCGGTCACTAGCGGGGTCTGAA-TGTGGGTGGCGGGGCCAGGCTGTCCCTGGGACCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129504 56 + 159171411 -TTCCTGGGTGTA---------------------CGGCGGGGTTTGGA-----GCTGGCGGGGCCGGGCTCTCCCTGGGACCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194254 60 + 16356641 -TTCCCGGGTGTA---------------------CGGCGGGGTCTGGA-GGTGGGTGGCGGGGCCGGGCTCTCCGTGGGATCC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762059 70 + 22939663 ----------ATGCCAGAGAGACTCCATGGGTGGCAGTGAGGTCTGGAGTCTGGAAGCCAGAACCAGGCTCTCCC--AGACC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181722430 70 + 182113224 --TCCCTGAC-CAGCTGTGAGAA-ACAGCAGGATGATTTGGGTACTTA-GGTAGGT--------TAGGATCTCCTTGGCAGCA i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055200 35 + 1231380 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I a score=331935.000000 s hg38.chr20_KI270870v1_alt 7246 36 + 183433 GGAGCCCAGAGCGTGGAGACGTGGCGGGCTGAGCCG s panTro5.chr20 66308839 36 + 66533130 GGAGCCCAGAGCGTGGAGACGGGGCGGGCTGAGCCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019524 36 + 62195757 GGAGCCCAGAGCGTGGAGACGGGGCGGGCTGAGCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408884 36 - 578057 GGAGCCCAGAGCGTGGAGACGCGGCGGGCTGAGCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935222 35 - 110113093 Ggagcccagagcgcggagacgtggcgggctgag-cg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661112 36 - 92844088 GGAGCCCAGAGCGTGCAGACGTGGCGGGCTGAGCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96322949 36 + 96509753 GGAGCCCAGAGCGTGCAGACGTGGCGGGCTGAGCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792777 36 - 16982598 GGAGCCCAGAGCGTGCAGACGTGGCGGGCCGAGCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602472 36 - 3785965 GGAGCCCAGAGCGTGCAGACGTGGCGGGCTGAGCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226420 36 - 90373283 GGAGCCCAGAGCGTGCAGACGCGGCGGCCTGAGCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128086 36 + 156971 GGAGCCCAGAGCGTGCAGACGTGGCGGGCTGAGCCG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5478636 36 - 5823884 GGAGCCCAGAGCGTGCAGACGTGGCGGGCTGAGCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129560 36 + 159171411 GGAGCCCGGAACGTGGAGACGCGGCGGGCTGAGCTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194314 35 + 16356641 GGGG-CCGGAACGTGGAGACGCGGCGGGCTGAGCCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1055235 36 + 1231380 GGAGCCCGGAACGTGGAGACGTGGCGGGCTGAGCCG i cebCap1.NW_016107870v1 I 35 C 0 s otoGar3.GL873542 22762129 23 + 22939663 -------------TGTGGGCAGGGCAGAATGAGCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181722500 35 + 182113224 GGAG-CCAGAGTGTGAGGGTTTTGTGGATTAAGTCA i mm10.chr2 C 0 I 109 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I a score=124852.000000 s hg38.chr20_KI270870v1_alt 7282 14 + 183433 CTCAGTGCGgcccc s panTro5.chr20 66308875 14 + 66533130 CTCAGTGTGgcccc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019560 14 + 62195757 CTCAGTGTGgcccc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408920 14 - 578057 CTCAGTGTGgcccc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935257 14 - 110113093 ctcagcgTGgccct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661148 14 - 92844088 CCCGGTGTGGCCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96322985 14 + 96509753 CCCGGTGTGGCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792813 14 - 16982598 CCCGGTGTGGCCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602508 14 - 3785965 CCCGGTGTGGCCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226456 14 - 90373283 CCCAGTGTGGCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128122 14 + 156971 CCCGGTGTGGCCCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5478672 14 - 5823884 CTCAGTGTGGCCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129596 14 + 159171411 CTCAGTGAGGCCCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194349 14 + 16356641 CTCAGTGCGGCCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1055271 14 + 1231380 GTCAGTACGGCCCC i cebCap1.NW_016107870v1 C 0 I 165 s otoGar3.GL873542 22762152 14 + 22939663 CTTAGTGGGGTTCC i otoGar3.GL873542 C 0 I 1 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I a score=77817.000000 s hg38.chr20_KI270870v1_alt 7296 14 + 183433 tgccccgcgcccac s panTro5.chr20 66308889 14 + 66533130 tgccccgcgcccac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019574 14 + 62195757 tgccccgcgcccac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408934 14 - 578057 tgccccgcgcccac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935271 14 - 110113093 cgccccgcgcccac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661162 14 - 92844088 TGCCCCGCGCCCTC i rheMac8.chr10 C 0 I 50 s macFas5.chr10 96322999 14 + 96509753 TGCCCCGCGCCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792827 14 - 16982598 TGCCCCGCGCCCTC i macNem1.NW_012014244v1 C 0 I 50 s cerAty1.NW_012001373v1 3602522 14 - 3785965 TGCCCCGCGCCCTC i cerAty1.NW_012001373v1 C 0 I 50 s chlSab2.chr2 90226470 14 - 90373283 TGCCCCGCGCCCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128136 14 + 156971 TGCCCCGCGCCCTC i manLeu1.NW_012101369v1 C 0 I 50 s colAng1.NW_012114444v1 5478686 14 - 5823884 TGCCCCGCGCCCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129610 8 + 159171411 CGTTCCGC------ i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194363 8 + 16356641 CGCTCCGC------ i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762167 5 + 22939663 TGCCC--------- i otoGar3.GL873542 I 1 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055285 165 + 1231380 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I a score=10242.000000 s hg38.chr20_KI270870v1_alt 7310 7 + 183433 cccgccc- s panTro5.chr20 66308903 7 + 66533130 cccgccc- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019588 7 + 62195757 cccgccc- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408948 7 - 578057 cccgccc- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935285 7 - 110113093 cccgccc- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96323013 3 + 96509753 ----CCT- i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90226484 7 - 90373283 CGCGCCC- i chlSab2.chr2 C 0 I 59 s colAng1.NW_012114444v1 5478700 7 - 5823884 CCCGCCC- i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22762172 3 + 22939663 -----CCA i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602536 50 - 3785965 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128150 50 + 156971 I e saiBol1.JH378156 16194371 0 + 16356641 C e macNem1.NW_012014244v1 16792841 50 - 16982598 I e cebCap1.NW_016107870v1 1055285 165 + 1231380 I e calJac3.chr5 58129618 0 + 159171411 C e aotNan1.NW_018500483v1 2594592 157 + 11732439 I e rheMac8.chr10 92661176 50 - 92844088 I a score=20589.000000 s hg38.chr20_KI270870v1_alt 7317 42 + 183433 cgTGTCAGGAGGTCCGCGGAG-------CGGGAGGACCCGCCTC---------CCGGG s panTro5.chr20 66308910 42 + 66533130 cgTGTCAGGAGGTCCGCGGTG-------GGGGAGGGCCCGCCTC---------CCGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019595 42 + 62195757 cgTGTCAGGAGGTCCGCGGTG-------GGGGAGGGCCCGCCTC---------CCGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408955 41 - 578057 cgTGTCAGGAGGTCCGCGGTG--------GGGAGGGCCCGCCTC---------CCGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935292 24 - 110113093 cgTGTCAGGAGGTCCGCGGTG----------------------------------GGG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96323016 21 + 96509753 ------------CCTGGCTGG-------CTGC--GGCCTCCC---------------- i macFas5.chr10 C 0 I 9 s colAng1.NW_012114444v1 5478707 39 - 5823884 GGTGTCAGGAGGCCCGCCCAC-------CTGC---CCCTCCCTC---------CTGGC i colAng1.NW_012114444v1 C 0 I 35 s calJac3.chr5 58129618 36 + 159171411 -----CAGGAGGTCCGAGGTG-------GGCGAGGGGCCGCCTC---------CCGG- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194371 36 + 16356641 -----CCAGAGGTCCGAGGTG-------GTCGCGGGGCCGCCTC---------CCGG- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762175 58 + 22939663 AGTGTCAAGAAGTCAGGGAGCAGATCCTGGCGAGAGCCTGTCTCTCTTCTTGGCTGGA i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602536 50 - 3785965 I e chlSab2.chr2 90226491 59 - 90373283 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128150 50 + 156971 I e macNem1.NW_012014244v1 16792841 50 - 16982598 I e cebCap1.NW_016107870v1 1055285 165 + 1231380 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I e rheMac8.chr10 92661176 50 - 92844088 I a score=27593.000000 s hg38.chr20_KI270870v1_alt 7359 20 + 183433 ------------------GAGAGCTCGCCCGC-------------CCCTCC s panTro5.chr20 66308952 20 + 66533130 ------------------GAGAGCTCGCCTGC-------------CCCTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019637 20 + 62195757 ------------------GAGAGCTCGCCCGC-------------CCCTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 408996 20 - 578057 ------------------GAGAGCTCGCCTGC-------------CCCTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935316 20 - 110113093 ------------------GAGAGCTCGCCTGC-------------CCCTCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96323046 17 + 96509753 ------------------GGGGTCTCTGCTGC-------------TCC--- i macFas5.chr10 I 9 C 0 s calJac3.chr5 58129654 20 + 159171411 ------------------GAGAGCTTGCCTGC-------------CCCTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194407 19 + 16356641 ------------------GAGAGCTTGCCAG--------------CCATCC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762233 51 + 22939663 CATGGCTCCTTAGTTCTTGAGATCTTTCTGGTACCTGGGGGAGGACCCTCT i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602536 50 - 3785965 I e colAng1.NW_012114444v1 5478746 35 - 5823884 I e chlSab2.chr2 90226491 59 - 90373283 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128150 50 + 156971 I e macNem1.NW_012014244v1 16792841 50 - 16982598 I e cebCap1.NW_016107870v1 1055285 165 + 1231380 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I e rheMac8.chr10 92661176 50 - 92844088 I a score=3906.000000 s hg38.chr20_KI270870v1_alt 7379 2 + 183433 CT s panTro5.chr20 66308972 2 + 66533130 CT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019657 2 + 62195757 CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409016 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935336 1 - 110113093 C- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96323063 2 + 96509753 CT i macFas5.chr10 C 0 C 0 s colAng1.NW_012114444v1 5478781 2 - 5823884 CT i colAng1.NW_012114444v1 I 35 I 3 s calJac3.chr5 58129674 2 + 159171411 CT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194426 2 + 16356641 CT i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762284 2 + 22939663 CT i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602536 50 - 3785965 I e chlSab2.chr2 90226491 59 - 90373283 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128150 50 + 156971 I e macNem1.NW_012014244v1 16792841 50 - 16982598 I e cebCap1.NW_016107870v1 1055285 165 + 1231380 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I e rheMac8.chr10 92661176 50 - 92844088 I a score=1963.000000 s hg38.chr20_KI270870v1_alt 7381 5 + 183433 --CCCGG s panTro5.chr20 66308974 5 + 66533130 --CCCGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019659 5 + 62195757 --CCCGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409018 5 - 578057 --CCCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935337 5 - 110113093 --CCCGG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96323065 2 + 96509753 -----GG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90226550 5 - 90373283 --CCTGG i chlSab2.chr2 I 59 C 0 s colAng1.NW_012114444v1 5478786 2 - 5823884 --CC--- i colAng1.NW_012114444v1 I 3 C 0 s calJac3.chr5 58129676 5 + 159171411 --CCAGG i calJac3.chr5 C 0 I 38 s saiBol1.JH378156 16194428 5 + 16356641 --CCCGG i saiBol1.JH378156 C 0 I 37 s otoGar3.GL873542 22762286 5 + 22939663 CTCTC-- i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602536 50 - 3785965 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128150 50 + 156971 I e macNem1.NW_012014244v1 16792841 50 - 16982598 I e cebCap1.NW_016107870v1 1055285 165 + 1231380 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I e rheMac8.chr10 92661176 50 - 92844088 I a score=309727.000000 s hg38.chr20_KI270870v1_alt 7386 48 + 183433 -CTGGCCGCGGGGCGGTCTGCAGACCCTTTGGCCGTGCCGGATCTGCCT s panTro5.chr20 66308979 48 + 66533130 -CTGGCTGCGGGGCGGTCTGCAGACCCTTTGGCTGTGCCTGATCTGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019664 48 + 62195757 -CTGGCTGCGGGGCGGTCTGCAGACCCTTTGGCTGTGCCTGATCTGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409023 48 - 578057 -CTGGCTGCGGGGCGGTCTGCAGACCCTTTGGCTGCGCCTGATCTGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935342 48 - 110113093 -CTGGCTGGGGCGTGGTCTGCAGACCCTTTGGCTGGGCCTTATCTGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661226 47 - 92844088 -CTGGCTGGGC-GTGGTCTGCAGACCCTGTGGCTGTGCCTGATCTGCCT i rheMac8.chr10 I 50 C 0 s macFas5.chr10 96323067 43 + 96509753 -----CTGGGC-GTGGTCTGCAGACCCTGTGGCTGTGCCTGATCTGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792891 48 - 16982598 -CTGGCCGGGCGGTGGTCTGCAGACCCTGTGGCTGTGCCTGATCTGCCT i macNem1.NW_012014244v1 I 50 C 0 s cerAty1.NW_012001373v1 3602586 48 - 3785965 -CTGGCTGGGCGGTGGTCTGCAGACCCTGTGGCTGTGCCTGATCTGCCT i cerAty1.NW_012001373v1 I 50 C 0 s chlSab2.chr2 90226555 44 - 90373283 -----CTGGGCGGGGGTCTGCAGACCCTGTGGCTGTGCCTGATCTGCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128200 48 + 156971 -CTGGCTGGGCGGCGGTCTGCAGACCCTGTGGCTGTGCCTCATCTGCCT i manLeu1.NW_012101369v1 I 50 C 0 s colAng1.NW_012114444v1 5478788 48 - 5823884 -CTGGCTGGTTGGTGGTCTGCAGACCCTGTGGCTGTGCCTGATCTGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129719 42 + 159171411 -CTGGCTGGGGAGTTGTCTGCAGGCCCTTT------TCCTGATCCGCCT i calJac3.chr5 I 38 I 1 s saiBol1.JH378156 16194470 42 + 16356641 -CTGGCTGGGGGGTGGTCTGCAGGCCCTTT------TCCTGATCTGCCT i saiBol1.JH378156 I 37 I 1 s otoGar3.GL873542 22762291 47 + 22939663 CTTGGCTGGAA-GTGGCCTGCAG-TCCACTGGCTGTGTCTGATTTGCTT i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055285 165 + 1231380 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I a score=3600.000000 s hg38.chr20_KI270870v1_alt 7434 1 + 183433 -G s panTro5.chr20 66309027 1 + 66533130 -G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019712 1 + 62195757 -G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409071 1 - 578057 -G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935390 1 - 110113093 -G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661273 1 - 92844088 -G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323110 1 + 96509753 -G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792939 1 - 16982598 -G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602634 1 - 3785965 -G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226599 1 - 90373283 -G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128248 1 + 156971 -G i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5478836 1 - 5823884 -G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129762 1 + 159171411 -G i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16194513 1 + 16356641 -G i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1055450 1 + 1231380 -G i cebCap1.NW_016107870v1 I 165 C 0 s otoGar3.GL873542 22762338 1 + 22939663 T- i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e aotNan1.NW_018500483v1 2594592 157 + 11732439 I a score=189196.000000 s hg38.chr20_KI270870v1_alt 7435 25 + 183433 GTCCCCGGGGAGAAGACGCTGAGGA s panTro5.chr20 66309028 25 + 66533130 GTCCCCGCGGAGAAGACGCTGAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019713 25 + 62195757 GTCCCCGCGGAGAAGACGCTGAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409072 25 - 578057 GTCCCCGGGGAGAAGACGCTGAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935391 25 - 110113093 GTCCCCGAGGAGAAGACGCTGAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661274 22 - 92844088 GTCCCC---GAGAAGAAGCTGAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323111 22 + 96509753 GTCCCC---GAGAAGAAGCTGAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792940 22 - 16982598 GTCCCC---GAGAAGAAGCGGAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602635 22 - 3785965 GTCCCC---GAGAAGAAGCTGAGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226600 22 - 90373283 GTCCCC---GAGCAGAAGCTGAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128249 22 + 156971 GTCCCC---GAGAAGAAGCTGAGGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5478837 22 - 5823884 GTCCCC---GAGAAGAAGCTGAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129763 25 + 159171411 GACCACGGGGAGAAGACGCTGAGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194514 25 + 16356641 GTCCCCGAGGAGAAAACGCTGAGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1055451 25 + 1231380 GTCCCCGAGGAGAAGACGCTGAGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2594749 25 + 11732439 GTCCCCGAGGAGAAGGCGCTGAGGA i aotNan1.NW_018500483v1 I 157 C 0 s otoGar3.GL873542 22762339 4 + 22939663 ---------------------GGGC i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181722535 109 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=1201720.000000 s hg38.chr20_KI270870v1_alt 7460 137 + 183433 TCCCATTGCTGGTCTGTGGATGGGGACAGGAGAC-----------------------------GCC----------CGAGGTAAGAAGGGGTCCGGGTTCTTTGGAGGAATCCTGGTTGGCGCCTTCTCTGCAGC--AGAGACGCCCGGCTGGGGCCGGAGGGCAAACTGGGGGCAGG s panTro5.chr20 66309053 137 + 66533130 TCCCATTGCTGGTCTGTGGATGGGGATAGGAGAC-----------------------------GCC----------CGAGGTAAGAAGGGGTCCGGGTTCTTTGGAGGAATCCTGGTTGGCGCCTTCTCTGCAGC--AGAGATGTCCGGCTGGGGCCGGAGGGCAAACTGGGGGCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019738 137 + 62195757 TCCCATTGCTGGTCTGTGGATGGGGATAGGAGAC-----------------------------GCC----------CGAGGTAAGAAGGGGTCCGGGTTCTTTGGAGGAATCCTGGTTGGCGCCTTCTCTGCAGC--AGAGATGTCCGGCTGGGGCCGGAGGGCAAACTGGGGGCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409097 135 - 578057 TCCCATTGCCGGTCTGTGA--TGGGATAGGAGAC-----------------------------GCC----------CGAGGTAAGAAGGGGTCCGGGTTCTTTGGAGGAATCCTGGTTGGCGCCTTCTCTGCAGC--AGAGATGTCCGGCTGGGGCCGGAGGGCAAACTGGGGGCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935416 139 - 110113093 TCCCCTTGCTGGACTGTGGATGGGGATAGGAGAC-----------------------------GCC----------CGAGGTAAGAAGGGGTCCGGGTTCTTTGGAGGAACCCTGGTTGGCGCCTTCTCTGCAGCGGAGAGATGTGCGGCTGGGGCCGGAGGGCAAACGGGGGGCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661296 137 - 92844088 TCCCATTGCCGGACTGTGGATGGGGATAGGAGCC-----------------------------GCC----------CGAGGTCAGAAGGGGTCTGGGTTCTTTGGAGGAATCCTGGTTGGCGCCTTCTCTGCAGC--AGAGACGTCCCGCTGGGGCCAGAGGGCAACCTGGGGGCCGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323133 137 + 96509753 TCCCATTGCCGGACTGTGGATGGGGATAGGAGCC-----------------------------GCC----------CGAGGTCAGAAGGGGTCTGGGTTCTTTGGAGGAATCCTGGTTGGCGCCTTCTCCGCAGC--AGAGACGTCCCGCTGGGGCCAGAGGGCAACCTGGGGGCCGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16792962 137 - 16982598 TCCCATTGCTGGACTGTGGATGGGGATAGGAGCC-----------------------------GCC----------CGAGGTCCGAAGGGGTCTGGGTTCTTTGGAGGAATCCTGGTTGGCGCCTTCTCTGCAGC--AGACACGTCCCGCTGGGGCCAGAGGGCAACCTGGGGGCCGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602657 119 - 3785965 TCCCATTGCTGGACTGTGGATGGGGATAGGAGCC-----------------------------GCC----------CGAGGTCAGAAGGGGTCTGGGTTCTTTGGAGGAATCCTGGTTGGCGCCTTCTCTGCAGC--AGAGACGTCCCG------------------CTGGGGGCCGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226622 137 - 90373283 TCCCATTGCTGGACTGTGGATGGGGCTAGGAGCC-----------------------------GCC----------CGAGGTCGGAAGGGGTCTGGGTTCTTTGGAGGCATCCTGGTTGGCGCCTTCTCTGCAGC--AGAGATGTCCCACTGGGGCCAGAGGGCAGCCTGGGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128271 137 + 156971 TCCCATTGCTGGACTGTGGATGGGGACAGGAGCC-----------------------------GCC----------CGAGGTCAGAAGGGGTCTGGGTTCTTTGGAGGAATCCTGCTTGGCGCCTTCTCTGCAGC--AGAGACGTCCCGCCGGGGCCAGAGGGCAACCTGGGGGCCGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5478859 137 - 5823884 TCCCATTGCTGGACTGTGGATGGGGACAGGAGCC-----------------------------GCC----------CGAGGTCAGAAGGGGTCTGGGTTCTTTGGAGGAATCCTGGTTGGCGCCTTCTCTGCAGC--AGAGATGGCCCGCTGGGGCCAGAGGGCAAACTGGGGGCCGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129788 127 + 159171411 TCCAGTTGCTGGACTGTGGATAGGG-TAGGAGCC-----------------------------GCC----------C--------TAGGGGTCTGGGTTCTTGGGAGGAAGCCTGGTTGCCACCTTCTCCGCAGT--AGAGATG-CCTGCTGGGGCCAGAAGGCAAACTAGGGGCAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194539 131 + 16356641 TCCCGTTGCTGGACTATGGATGGGG-TAGGAGCC-----------------------------GCC----------CGAGGGAATCAGGGGTCTGGGTTC-TGGGAGTAAGCCTAGTTG---GCTTCTCCGCAGT--AGAGATG-CCCGCTGGGGCCAGAGGGCAAACTGGGGGCAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1055476 130 + 1231380 TCCCGTTGCTGGACTGCGGATGGGG-TAGGAGCC-----------------------------GCC----------CAAGGGAATCAGGGGTCTGGGTTCTTGGGAGGAAGCCTAGTGG---GCATCT--GCAGT--AGAGATG-CCCGCTGGGGCCAGAGGGCAAGCGGGGGGCAGG i cebCap1.NW_016107870v1 C 0 I 55 s aotNan1.NW_018500483v1 2594774 134 + 11732439 TCCCTTTGCTGGACTGTGGAT-GGG-TAGGAGCC-----------------------------GCC----------CGAGGGAATCAGGGGTCTGGGGTCTTGGGAGGAAGCCTAGTTGGCACCTTCTCCGCAGT--AGAGCTG-CCCGCTGGGGCCAGAGGGCAAACTGGGGGCAGG i aotNan1.NW_018500483v1 C 0 I 55 s otoGar3.GL873542 22762343 113 + 22939663 TCACCTTGGTGGGCTGTGGATATGG-------------------------------------------------------------AAGGGTCTGGGTTTTTAGAGG--AGCTTGCTCAACATCTTCCCTGCTGT--GGAGATGTCCTGCTGGGGCCAGAGGAACAGGGGAAGGCATG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181722644 161 + 182113224 TCCCTTTGCTGGGCTGTGGGTGGGAATAAAGGTCTGTATAAGTACTACTTACTAAATGATTTTGCCACTAGAGCATTGAAGGGGACAAGAGTTTGGAATCTTCAGAGAAAATTTGGCTGGTACCTCCTCTGTTGT--GG------TCAGCTCTAGC--------AAACAATAGCCAG- i mm10.chr2 I 109 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=182735.000000 s hg38.chr20_KI270870v1_alt 7597 33 + 183433 GTGGGAGACCTCGGCCCTGAGGGCTGTAGGGGC s panTro5.chr20 66309190 33 + 66533130 GTGGGAGACCTCGGCCCTGAGGGCTGTAGGGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019875 33 + 62195757 GAGGGAGACCTCGGCCCTGAGGGCTGTAGGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409232 32 - 578057 GTGGGAGACCTCGGCCCTGAGGGCTGTA-GGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935555 32 - 110113093 GT-GGAGACCTCGGCCCTGAGGGCTGTAGGGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661433 33 - 92844088 GTGGGAGACCTGGGCCCTGAGCGCTGCAGGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323270 33 + 96509753 GTGGGAGACCTGGGCCCTGAGCGCTGCAGGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793099 33 - 16982598 GTGGGAGACCTCGGCCCTGAGCGCTGCAGGGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602776 32 - 3785965 GTGGGAGACCTCGGCCCTGAGCGCTGCAGGGG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226759 31 - 90373283 --GGGAGACCTCGGCCCTGAGGGCTGTAGGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128408 33 + 156971 GTGGGAGACCTCGGCCCTGAGCGCTGCAGGGGC i manLeu1.NW_012101369v1 C 0 I 16 s colAng1.NW_012114444v1 5478996 33 - 5823884 GTGGGAGACCTCGGCCCTGAGGGCTGTAGGGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129915 32 + 159171411 -AGGGAGACTCGGGCCTGAGGGGGTGTAGGGGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194670 7 + 16356641 -AGGGAGA------------------------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762456 31 + 22939663 GGGGTGGACACTGGCCATGAGGGCTGAGGGC-- i otoGar3.GL873542 C 0 I 3 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181722805 0 + 182113224 C e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055606 55 + 1231380 I e aotNan1.NW_018500483v1 2594908 55 + 11732439 I a score=41984.000000 s hg38.chr20_KI270870v1_alt 7630 24 + 183433 TCTTGCCTGGGCGCTCCTTAAGCT s panTro5.chr20 66309223 24 + 66533130 TCTTGCCTGGGCGCTCCTTAAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019908 24 + 62195757 TCTTGCCTGGGCGCTCCTTAAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409264 24 - 578057 TCTTGCCTGGGCGCTCCTTAAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935587 24 - 110113093 TCTTGCCCGGGCGCTCCTTAAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661466 13 - 92844088 CCTCGCCCTG-----------GCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323303 13 + 96509753 CCTCGCCCTG-----------GCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793132 13 - 16982598 CCTCGTCCTG-----------GCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602808 24 - 3785965 CCTCGTCCTGGCGCTCCGTCAGCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226790 22 - 90373283 -CCTGTCCTGGCGCTCCGTCAGC- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5479029 24 - 5823884 CCTCGTCCTGGCGCTCCGTCAGCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129947 20 + 159171411 -CTTGCCCTGGAGCTCCTTAA--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194677 20 + 16356641 -CTTGCCTTGGCGCTCCTTAG--- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762490 20 + 22939663 TGTTGGGCAGGCGCTCTGCT---- i otoGar3.GL873542 I 3 I 1 s mm10.chr2 181722805 21 + 182113224 ---CGGATAGGCTATCCCCAAGGG i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128441 16 + 156971 I e cebCap1.NW_016107870v1 1055606 55 + 1231380 I e aotNan1.NW_018500483v1 2594908 55 + 11732439 I a score=3637.000000 s hg38.chr20_KI270870v1_alt 7654 16 + 183433 CCCCCGCCCCCTCCGC s panTro5.chr20 66309247 16 + 66533130 CCCCCGCCCCCTCCGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019932 16 + 62195757 CCCCCGCCCCCTCCGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409288 16 - 578057 CCCCCGCCCCCTCCGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935611 15 - 110113093 CCCGCG-CCCCTCCGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661479 11 - 92844088 -CCCCGCCCCT----C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323316 11 + 96509753 -CCCCGCCCCT----C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793145 11 - 16982598 -CTCCGCCCCT----C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602832 11 - 3785965 -CCCCGCCCCT----C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226812 12 - 90373283 GCCCCGCCCCT----G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128457 11 + 156971 GCCCCGCCCCT----- i manLeu1.NW_012101369v1 I 16 C 0 s colAng1.NW_012114444v1 5479053 5 - 5823884 -------CCCC----C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129967 3 + 159171411 ---CCG---------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194697 3 + 16356641 ---CCG---------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762511 12 + 22939663 CCCAAGCCTCC----C i otoGar3.GL873542 I 1 I 2 s mm10.chr2 181722826 16 + 182113224 TGCCTATCTCTTTCAC i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055606 55 + 1231380 I e aotNan1.NW_018500483v1 2594908 55 + 11732439 I a score=-1242.000000 s hg38.chr20_KI270870v1_alt 7670 1 + 183433 -C s panTro5.chr20 66309263 1 + 66533130 -C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019948 1 + 62195757 -C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409304 1 - 578057 -C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935626 1 - 110113093 -C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661490 1 - 92844088 -C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323327 1 + 96509753 -T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793156 1 - 16982598 -C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602843 1 - 3785965 -C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226824 1 - 90373283 -C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128468 1 + 156971 -C i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479058 1 - 5823884 -G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129970 1 + 159171411 -C i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194700 1 + 16356641 -C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1055661 1 + 1231380 -C i cebCap1.NW_016107870v1 I 55 C 0 s mm10.chr2 181722842 1 + 182113224 A- i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e aotNan1.NW_018500483v1 2594908 55 + 11732439 I e otoGar3.GL873542 22762523 2 + 22939663 I a score=166241.000000 s hg38.chr20_KI270870v1_alt 7671 19 + 183433 CCCCACCCCGCGGTGCTCA s panTro5.chr20 66309264 19 + 66533130 CCCCACCCCGCGGTGCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019949 19 + 62195757 CCCCACCCCGCGGTGCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409305 19 - 578057 CCCCACCCCGCGGTGCTCG i gorGor5.CYUI01015848v1 C 0 I 107 s nomLeu3.chr13 109935627 19 - 110113093 CCCCACCCCCTGGTGCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661491 19 - 92844088 CCCCACCCCGTGGGGCTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323328 19 + 96509753 CCCCACCCCGTGGGGCTCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793157 18 - 16982598 CCCCACCCCGT-GGGCTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602844 19 - 3785965 CCCCACCCCGTGGGGCTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226825 19 - 90373283 CCCCACCCCGTGGGGCTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128469 19 + 156971 CCCCACCCCGTGGGGCTCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479059 19 - 5823884 CCCCACCCCGTGGGGCTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129971 19 + 159171411 CCCCACCCCGTGGTGCTCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16194701 19 + 16356641 CCCCACCCCGTGGTGCGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1055662 19 + 1231380 CCCCACCCCGTGGTGCTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2594963 19 + 11732439 CCCCACCCCGTGGTGCTCA i aotNan1.NW_018500483v1 I 55 C 0 s otoGar3.GL873542 22762525 5 + 22939663 -----------GGGGC--- i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181722843 10 + 182113224 ---------GCCTGGTTCA i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=52994.000000 s hg38.chr20_KI270870v1_alt 7690 6 + 183433 CTCTCA-- s panTro5.chr20 66309283 6 + 66533130 CCCTCA-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019968 6 + 62195757 CCCTCA-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409431 6 - 578057 CTCTCA-- i gorGor5.CYUI01015848v1 I 107 C 0 s nomLeu3.chr13 109935646 6 - 110113093 CTGTCA-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661510 6 - 92844088 CGCTCA-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323347 6 + 96509753 CGCTCA-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793175 6 - 16982598 CTCTCA-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602863 6 - 3785965 CTCTCA-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226844 6 - 90373283 CTCTCA-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128488 6 + 156971 CTCTCA-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479078 6 - 5823884 CTCTCA-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58129990 6 + 159171411 TTCTCG-- i calJac3.chr5 C 0 I 111 s saiBol1.JH378156 16194720 6 + 16356641 CTCTCA-- i saiBol1.JH378156 C 0 I 1058 s cebCap1.NW_016107870v1 1055681 6 + 1231380 CTCTCA-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2594982 6 + 11732439 CTCTCA-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762530 4 + 22939663 --CCCA-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181722853 6 + 182113224 --CTCACC i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=56938.000000 s hg38.chr20_KI270870v1_alt 7696 8 + 183433 GT------CCTGCC s panTro5.chr20 66309289 8 + 66533130 GT------CCTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019974 8 + 62195757 GT------CCTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409437 8 - 578057 GT------CCTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935652 8 - 110113093 GT------CCTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661516 8 - 92844088 GC------CCTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323353 8 + 96509753 GC------CCTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793181 8 - 16982598 GC------CCTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602869 8 - 3785965 GC------CCTGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226850 8 - 90373283 GC------CCTGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128494 8 + 156971 GC------CCTGCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479084 8 - 5823884 GC------CCTGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130107 14 + 159171411 gctcggtacctgcc i calJac3.chr5 I 111 C 0 s saiBol1.JH378156 16195784 8 + 16356641 gc------cccgcc i saiBol1.JH378156 I 1058 C 0 s cebCap1.NW_016107870v1 1055687 8 + 1231380 GC------CCCGCC i cebCap1.NW_016107870v1 C 0 I 2137 s aotNan1.NW_018500483v1 2594988 8 + 11732439 GC------CCCGCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762534 2 + 22939663 GT------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181722859 8 + 182113224 ------AATGTGTT i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I a score=23315.000000 s hg38.chr20_KI270870v1_alt 7704 4 + 183433 TTGC s panTro5.chr20 66309297 4 + 66533130 TTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019982 4 + 62195757 TTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409445 4 - 578057 TTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935660 4 - 110113093 TTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661524 3 - 92844088 -TGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323361 3 + 96509753 -TGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793189 3 - 16982598 -TGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602877 3 - 3785965 -TGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90226858 3 - 90373283 -TGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128502 3 + 156971 -TGC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479092 3 - 5823884 -TGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130121 4 + 159171411 ctcc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16195792 4 + 16356641 ctcc i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2594996 4 + 11732439 CTGC i aotNan1.NW_018500483v1 C 0 I 238 s mm10.chr2 181722867 4 + 182113224 CCCC i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e otoGar3.GL873542 22762536 0 + 22939663 C a score=258712.000000 s hg38.chr20_KI270870v1_alt 7708 73 + 183433 GCACATTC-CCACGCC-CGGGCCTCTCCTG---------CCCGCCC--CTCGTT----GTTCACTT---GCTCATTACGCCTCACAC---CT------------GGCT---- s panTro5.chr20 66309301 73 + 66533130 GCACATTC-CCACTCC-CGGGCCTCTCCTG---------CCCGCCC--CTCGTT----GTTCACTT---GCTCATTACGCCTCACAC---CT------------GGCT---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62019986 73 + 62195757 GCACATTC-CCACTCC-CGGGCCTCTCCTG---------CCCGCCC--CTCGTT----GTTCACTT---GCTCATTACGCCTCACAC---CT------------GGCT---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409449 73 - 578057 GCACATTC-CCACTCC-CGGGCCTCTCCTG---------CCCGCCC--CTCGTT----GTTCACTT---GCTCATTACGCCTCACAC---CT------------GGCT---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935664 73 - 110113093 GCGCATTC-CCACTCC-CGAGCCTCTCCTG---------CCCGCCC--CTCGTT----GTTCACTT---GCTCGTTACGCCTCACAC---CT------------GGCT---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661527 67 - 92844088 GCACACTC-CCTCCCC-C-AGCCTCTCCTG---------CCCGCCC--CTCATT----GTTCACTC----CGCATTAGGCCTCACAC---CT-------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323364 66 + 96509753 GCACACTC-CCTCCCC-C-AGCCTCTCCTG----------CCCGCC--CTCATT----GTTCACTC----CGCATTAGGCCTCGCAC---CT-------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793192 66 - 16982598 GCACACGC-CCTCCCC-C-AGCCTCTCCTG----------CCGCCC--CTCATT----GTTCCCTC----CTCATTAGGCCTCACAC---CT-------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3602880 72 - 3785965 GCACACTC-CCACCCCGG-AGCCTCTCCTG---------CCCGCCC--CTCATT----GTTCACTC----CTCATTAGGCCTCACAC---CTGGCT---------------- i cerAty1.NW_012001373v1 C 0 I 1681 s chlSab2.chr2 90226861 70 - 90373283 GCACACTC-CCACCCC-C--GCCTCTCCTG---------CCCGCCC--CTCATT----GTTCACTC----CTCATTAGGCCTCACAC---CT----GGCT------------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128505 67 + 156971 GCACACTC-CCACCCC-C-AGCCTCTCCTG---------CCCGCCC--CTCATC----GTTCACTC----CTCATTAGGCCTCACAC---CT-------------------- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479095 73 - 5823884 GCACACTC-CCACTCC-CGAGCCTCTCCTG---------CCCGCCC--CTCATT----GTTCGCTC---GCTCATTACGCCTCACAC---CT--------GGCT-------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130125 86 + 159171411 acgcgctc-ccactcc---ggccccgcccgcccctgggccccgccc--cTCGTTCCGCGCTCGCTGCTCGCTCGTTACGCCTCACACTGGCT-------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16195796 65 + 16356641 acgcgctc-ccactcc---ggccccccc----------tcccgccc--cTCGTTCCGAGCTCTCTG-----------CGCCTCACGCTGGCT-------------------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762536 27 + 22939663 ----------------------------------------------------------GTTTGGGC----CTCATCACTCCTCATAC---CT-------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181722871 76 + 182113224 TCATGATCTTCACACC-CACTCATCTTCCA---------CTCACTCTGTTCCTC----CTTCACAC---ATTTTTTGCCAAGCACAC---CT----------------GCTT i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e aotNan1.NW_018500483v1 2595000 238 + 11732439 I a score=262796.000000 s hg38.chr20_KI270870v1_alt 7781 61 + 183433 ------CTGCCGCGGGCTTGGAGC----GG-G--TGTCTGGGAAACACAGTCTC---------------------ACTTGTCTCCTCAAGGGGCT s panTro5.chr20 66309374 61 + 66533130 ------CTGCCGCGGGCTTGGAGC----GG-G--TGTCTCGGAAACACAGTCTC---------------------ACTTGTCTCCTCAAGGGGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020059 61 + 62195757 ------CTGCCGCGGGCTTGGAGC----GG-G--TGTCTCGGAAACACAGTCTC---------------------ACTTGTCTCCTCAAGGGGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409522 60 - 578057 ------CTGCCGCGGGCTTGGAGC-----G-G--TGTCTGGGAAACACAGTCTC---------------------ACTTGTCTCCTCGAGGGGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935737 61 - 110113093 ------CTGCCGCGGGCTTGGAGC----GG-G--TGTCTGGGAAACACAGTCTC---------------------ACTTGTCTCCTCAAGGGGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661594 51 - 92844088 --------------GGCTGGGAGC----GG-G--TGTCTGGGAA--ACAGTCTC---------------------ACTTGTCTCCTCAAGGGGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323430 51 + 96509753 --------------GGCTGGGAGC----GG-G--TGTCTGGGAA--ACAGTCTC---------------------ACTTGTCTCCTCAAGGGGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793258 51 - 16982598 --------------GGCTGGGAGC----GG-G--TGTCTGGGAA--ACAGTCTC---------------------ACTTGTCTCCTCAAGGGGCT i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90226931 58 - 90373283 -------TGGAGCGGGCTTGGAGC----GG-G--TGTCTGGGAA--ACAGTCTC---------------------ACTTGTCTCCTCAAGGGGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 128572 51 + 156971 --------------GGCTTGGAGA----GG-G--TGTCTGGGAA--ACAGTCTC---------------------ACTTGTCTCCTCAAGGGGCT i manLeu1.NW_012101369v1 C 0 M 760 s colAng1.NW_012114444v1 5479168 58 - 5823884 -------TGGAGCGGGCTTGGAGC----GG-G--TGTCTGGGAA--ACCGTCTC---------------------ACTTGTCTCCTCAAGGGGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130211 58 + 159171411 -------CTGCTCCGGCTTGAAGC----AGCG--TGTCTGGGAA--ACGGTCTC---------------------ACTTGTCAGCTCAAGGGCT- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16195861 60 + 16356641 -------CTGCTCGGGCTTGGAGC----AGCGTCTGTCTGGGAA--ACAGCCTC---------------------ATTTGTCTGCTCAAGGGCT- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762563 57 + 22939663 --------------GGTCTGGATCTCCATG-G--CATCTAAGAAGTGTAACCTG---------------------AGTGAGCCTCTCAAGGAGCT i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181722947 87 + 182113224 TTGCCACTCTCTGTGGCCTGAACA----CG-G--T-TCTGGAAAGCGAGGTGTTTTGCTGTATTCATTATAAGGGGCTCTTGTCCTGAAGGGGTT i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602952 1681 - 3785965 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e aotNan1.NW_018500483v1 2595000 238 + 11732439 I a score=66104.000000 s hg38.chr20_KI270870v1_alt 7842 17 + 183433 CCGGGGCACCGTAACAG s panTro5.chr20 66309435 17 + 66533130 CCGGGGCACAGTAACAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020120 17 + 62195757 CCGGGGCACAGTAACAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409582 17 - 578057 CCGGGGCACAGTAACAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935798 16 - 110113093 -CGGGGCACAGTAACAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661645 17 - 92844088 CCGGGGCACAGTAACAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96323481 17 + 96509753 CCGGGGCACAGTAACAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793309 17 - 16982598 CCGGGGCACAGTAACAG i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90226989 17 - 90373283 CCGGGGCACAGTAACAG i chlSab2.chr2 C 0 I 171 s colAng1.NW_012114444v1 5479226 17 - 5823884 CCGGGGCACAGTAGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130269 4 + 159171411 -CGGG------------ i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16195921 5 + 16356641 CCAGG------------ i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762621 17 + 22939663 GCAAGGTGCGGGAACAG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181723034 17 + 182113224 CTCTTACTCAGGAGCAG i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602952 1681 - 3785965 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128623 760 + 156971 M e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e aotNan1.NW_018500483v1 2595000 238 + 11732439 I a score=8380.000000 s hg38.chr20_KI270870v1_alt 7859 2 + 183433 CG s panTro5.chr20 66309452 2 + 66533130 CG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020137 2 + 62195757 CG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409599 2 - 578057 CG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935814 2 - 110113093 CG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92661662 2 - 92844088 CG i rheMac8.chr10 C 0 I 1538 s macFas5.chr10 96323498 2 + 96509753 CG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793326 2 - 16982598 CG i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5479243 2 - 5823884 CG i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22762638 2 + 22939663 CA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181723051 2 + 182113224 TG i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602952 1681 - 3785965 I e chlSab2.chr2 90227006 171 - 90373283 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128623 760 + 156971 M e saiBol1.JH378156 16195926 0 + 16356641 C e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e calJac3.chr5 58130273 0 + 159171411 C e aotNan1.NW_018500483v1 2595000 238 + 11732439 I a score=5900.000000 s hg38.chr20_KI270870v1_alt 7861 2 + 183433 TG s panTro5.chr20 66309454 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020139 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409601 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935816 2 - 110113093 TG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96323500 2 + 96509753 TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16793328 2 - 16982598 TG i macNem1.NW_012014244v1 C 0 I 4308 s colAng1.NW_012114444v1 5479245 2 - 5823884 CG i colAng1.NW_012114444v1 C 0 C 0 s mm10.chr2 181723053 2 + 182113224 TG i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602952 1681 - 3785965 I e chlSab2.chr2 90227006 171 - 90373283 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128623 760 + 156971 M e saiBol1.JH378156 16195926 0 + 16356641 C e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e calJac3.chr5 58130273 0 + 159171411 C e aotNan1.NW_018500483v1 2595000 238 + 11732439 I e rheMac8.chr10 92661664 1538 - 92844088 I e otoGar3.GL873542 22762640 0 + 22939663 C a score=-19243.000000 s hg38.chr20_KI270870v1_alt 7863 9 + 183433 --CAGAGCGCA s panTro5.chr20 66309456 9 + 66533130 --CAGAGCGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020141 9 + 62195757 --CAGAGCGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409603 9 - 578057 --CAGAGCGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935818 9 - 110113093 --CAGAGCGCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96323502 8 + 96509753 ---TGGGCACA i macFas5.chr10 C 0 C 0 s colAng1.NW_012114444v1 5479247 8 - 5823884 ---CAGGCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130273 1 + 159171411 ---------C- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16195926 1 + 16356641 ---------C- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22762640 3 + 22939663 ------GCA-- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181723055 5 + 182113224 TACTA------ i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602952 1681 - 3785965 I e chlSab2.chr2 90227006 171 - 90373283 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128623 760 + 156971 M e macNem1.NW_012014244v1 16793330 4308 - 16982598 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e aotNan1.NW_018500483v1 2595000 238 + 11732439 I e rheMac8.chr10 92661664 1538 - 92844088 I a score=5434.000000 s hg38.chr20_KI270870v1_alt 7872 2 + 183433 GT s panTro5.chr20 66309465 2 + 66533130 GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020150 2 + 62195757 GT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409612 2 - 578057 GT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935827 2 - 110113093 GT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96323510 2 + 96509753 GT i macFas5.chr10 C 0 I 1200 s colAng1.NW_012114444v1 5479255 2 - 5823884 GT i colAng1.NW_012114444v1 C 0 I 2 s calJac3.chr5 58130274 2 + 159171411 GT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16195927 2 + 16356641 GT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595238 2 + 11732439 GT i aotNan1.NW_018500483v1 I 238 C 0 s otoGar3.GL873542 22762644 1 + 22939663 G- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181723060 2 + 182113224 AT i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602952 1681 - 3785965 I e chlSab2.chr2 90227006 171 - 90373283 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128623 760 + 156971 M e macNem1.NW_012014244v1 16793330 4308 - 16982598 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e rheMac8.chr10 92661664 1538 - 92844088 I a score=28507.000000 s hg38.chr20_KI270870v1_alt 7874 11 + 183433 CAGGCTGCCGT s panTro5.chr20 66309467 11 + 66533130 CAGGCTGCCGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020152 11 + 62195757 CAGGCTGCCGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409614 11 - 578057 CAGGCTGCCGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935829 11 - 110113093 CAGGCTGCCGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96324712 11 + 96509753 CAGGCTGCAGT i macFas5.chr10 I 1200 I 30 s colAng1.NW_012114444v1 5479259 3 - 5823884 CAG-------- i colAng1.NW_012114444v1 I 2 C 0 s calJac3.chr5 58130276 11 + 159171411 CAGGCTGCTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16195929 11 + 16356641 CAGGCTGCTGT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595240 11 + 11732439 CAGGCTGCTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762645 10 + 22939663 CAGA-TGTGGT i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181723062 5 + 182113224 TAGGC------ i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602952 1681 - 3785965 I e chlSab2.chr2 90227006 171 - 90373283 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128623 760 + 156971 M e macNem1.NW_012014244v1 16793330 4308 - 16982598 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e rheMac8.chr10 92661664 1538 - 92844088 I a score=215095.000000 s hg38.chr20_KI270870v1_alt 7885 36 + 183433 GCTGCTGCTTTGCGAGGTGTGACTGCAGCGCAGCCA s panTro5.chr20 66309478 36 + 66533130 GCTGCTGCTTTGCGAGGTGTGACTGCAGCGCAGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020163 36 + 62195757 GCTGCTGCTTTGCGAGGTGTGACTGCAGCGCAGCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409625 36 - 578057 GCTGCTGCTTTGCGAGGTGTGACTGCAGCGCAGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935840 36 - 110113093 GCTGCTGCTTTGCGAGGTGTGACTGCAGCGCAGCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92663202 36 - 92844088 GCTGCTGCTTTGCGAGGTGTGACTGCAGCGCAGCCA i rheMac8.chr10 I 1538 C 0 s macFas5.chr10 96324753 36 + 96509753 GCTGCTGCTTTGCGAGGTGTGACTGCAGCGCAGCCA i macFas5.chr10 I 30 C 0 s chlSab2.chr2 90227177 36 - 90373283 GCTGCTGCTTTGCAAGGTGTGACTGCAGCGCAGGCA i chlSab2.chr2 I 171 C 0 s colAng1.NW_012114444v1 5479262 36 - 5823884 GCTGCTGCTTTGCGAGGTGTGACTGCAGCGCAGCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130287 36 + 159171411 GCCACTGCTTTGCGAGGTGTGACTGCAGCGCAGCCG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16195940 36 + 16356641 GCTGCTGCTTTGCGAGGTGTGACTGCAGCGCAGCCG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595251 36 + 11732439 GCCACTGCTTTGCGAGGTGTGACTGCAGCGCAGCCG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762658 24 + 22939663 TAGGCTGTGGTATGAGGTGTGATT------------ i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181723067 26 + 182113224 -------CTTGCTGAAGTATGACTATACAGTGA--- i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e cerAty1.NW_012001373v1 3602952 1681 - 3785965 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128623 760 + 156971 M e macNem1.NW_012014244v1 16793330 4308 - 16982598 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I a score=216057.000000 s hg38.chr20_KI270870v1_alt 7921 40 + 183433 GGAAACAAATCC-----------------AGGGACAGCTTGTTCTTCCT---GCGGTGTC s panTro5.chr20 66309514 40 + 66533130 GGAAACAAATCC-----------------AGGGACAGCTTGTTCTTCCT---GCGGTGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020199 40 + 62195757 GGAAACAAATCC-----------------AGGGACAGCTTGTTCTTCCT---GCGGTGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409661 40 - 578057 GGAAGCAAATCC-----------------AGGGACGGCTTGTTCTTCCT---GCGGTGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935876 40 - 110113093 GGAAACAAATCC-----------------ACGGACAGCTTGTTCTTCCT---GCGGTGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92663238 40 - 92844088 GGAAACAAATCC-----------------AGGGACAGCTTGTTCTTCCT---GCGGTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96324789 40 + 96509753 GGAAACAAATCC-----------------AGGGACAGCTTGTTCTTCCT---GCGGTGTG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3604633 40 - 3785965 GGAAACAAATCC-----------------AGGGACAGCTTGTTCTTCCT---GCGGTGTG i cerAty1.NW_012001373v1 I 1681 C 0 s chlSab2.chr2 90227213 40 - 90373283 GGAAACAAATCC-----------------AGGGACAGCTTCTTCTTCCT---GCAGTGTG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5479298 40 - 5823884 GGAAACAAATCC-----------------AGGGACAGCTTGTTCTTCCT---GCGGTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130323 57 + 159171411 GGAAACGAGTCCTTGCGGCATGGGTGTTGGGGGACAGCTCGTTCTTCTT---GCGGCGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16195976 57 + 16356641 GGAAACGAGTCCTTGCGGCGTGGGTGTTGGGGGACAGCTCGTTCTTCTT---GCGGCGTG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595287 57 + 11732439 GGAAACGAGTCCTTGCGGCGCGGGTGTTGGGGGACAGCCCGTTCTTCTT---GCGGCGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762682 25 + 22939663 ------------------------------AGCACTGCTTGTTCTGTGG---GCTGTG-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181723093 32 + 182113224 --------------------------AGCAGGCACAGCTTGATCTCAGCAGAGCTGTG-- i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e manLeu1.NW_012101369v1 128623 760 + 156971 M e macNem1.NW_012014244v1 16793330 4308 - 16982598 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I a score=171192.000000 s hg38.chr20_KI270870v1_alt 7961 20 + 183433 G-------------------------------GTGTTGGTGGTGGCTTAAA s panTro5.chr20 66309554 20 + 66533130 G-------------------------------GTGTTGGTGGTGGCTTAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020239 20 + 62195757 G-------------------------------GTGTTGGTGGTGGCTTAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409701 20 - 578057 G-------------------------------GTGTTGGTGATGGCTTAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935916 20 - 110113093 G-------------------------------GTGTTGGTGGTGGCTTAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92663278 20 - 92844088 G-------------------------------GTGTGGGTGGTGGCTTAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96324829 20 + 96509753 G-------------------------------GTGTGGGTGGTGGCTTAAA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3604673 20 - 3785965 G-------------------------------GTGTTGGTGGTGGCTTAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90227253 20 - 90373283 G-------------------------------GTATTGGTAGTGGCTTAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 129384 20 + 156971 G-------------------------------GTGTTGGTGGTGGCTTAAA i manLeu1.NW_012101369v1 M 760 C 0 s colAng1.NW_012114444v1 5479338 20 - 5823884 G-------------------------------GTGTTGGTGGTGGCGTAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130380 20 + 159171411 G-------------------------------GTGGTGGTGGTGGCTCAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16196033 51 + 16356641 GGTGTTGGGGGACAGCTCGTTCTGCTTGCGGCGTGTTGGTGGTGGCTCAAA i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595344 20 + 11732439 G-------------------------------GTGTTGGTGGTGGCTCAAA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762707 20 + 22939663 G-------------------------------GTGTGGGTGGTGACTCAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181723125 20 + 182113224 G-------------------------------GTGTGGGTTGTGGTTTAGA i mm10.chr2 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e macNem1.NW_012014244v1 16793330 4308 - 16982598 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I a score=172443.000000 s hg38.chr20_KI270870v1_alt 7981 22 + 183433 AATTGCCCA---CAGACTGggctca s panTro5.chr20 66309574 22 + 66533130 AATTGCCCA---CAGACTGggctca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020259 22 + 62195757 AATTGCCCA---CAGACTGggctca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409721 22 - 578057 AATTGCCCA---CAGACTGggctca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935936 22 - 110113093 AATTGCCCA---CGGGCTGggttca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92663298 22 - 92844088 AATTGTCCA---CAGGCTGggctca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96324849 22 + 96509753 AATTGTCCA---CAGGCTGggctca i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3604693 22 - 3785965 AATTGTCCA---CAGGCTGggctca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90227273 22 - 90373283 AATTGTCCA---CAGGCTGggctca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 129404 22 + 156971 AATTGTCCA---CAGGCTGggctca i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479358 22 - 5823884 AATTGTCCA---CAGGCTGggctca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130400 22 + 159171411 AAGTGTCCA---CAGGCTGggctcg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16196084 22 + 16356641 AAGTGTCTA---CGGGCTGggctcg i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595364 22 + 11732439 AAGTGTCCA---CAGGCTGggctcg i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181723145 25 + 182113224 AAGTACCCATTCTAGGCTGTCCTCA i mm10.chr2 C 0 I 860 e canFam3.chr24 47537240 1720 + 47698779 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e macNem1.NW_012014244v1 16793330 4308 - 16982598 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e otoGar3.GL873542 22762727 0 + 22939663 C a score=970796.000000 s hg38.chr20_KI270870v1_alt 8003 139 + 183433 tgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgagcccaggagtttgagaccagcctgggcaacatagtgagaccccgtctt-tcaaaaaaa-agaaa-aatttgcctggcgtggtggcgcacgcat s panTro5.chr20 66309596 137 + 66533130 tgcctgtaatctcagcactttgggaggctgaggcaggaggatcacttgagcccaggagtttgagaccagcctgggcaacatagtgagaccccgtctt-tcaaaaaaa---aaa-aatttgcctggcgtggtggcgcacgcat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020281 137 + 62195757 tgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgagcccaggagtttgagaccagcctgggcaacatagtgagaccccgtctt-tcaaaaaaa---aaa-aatttgcctggcgtggtggcgcacgcat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409743 137 - 578057 cgcccgtaatcccagcactttgggaggctgaggcaggaggatcacttgagcccgggagtttgagaccagcctgggcaacatagtgagaccccgtctt-tcaaaaaaa---aaa-aatttgcctggcgtggtggcgcacgcat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109935958 140 - 110113093 tgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgagcccaggagtttgagaccagcctgggcaacatagtgagaccctgtctt-tcaaaaaaaaaaaaa-aatttgactggcgtggtggcgcacgcac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92663320 135 - 92844088 tgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaacccaggagtttgagaccagcctgggcaacatagtgagacctcgtctt-t--aaaaaa---aaa-aaattgcctggcatggtggggcacgcat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96324871 135 + 96509753 tgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaacccaggagtttgagaccagcctgggcaacatagtgagacctcgtctt-t--aaaaaa---aaa-aaattgcctggcatggtggggcacgcat i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3604715 136 - 3785965 tgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgaacccaggagtttgagaccagcctgggcaacatagtgagacctcgtctt-t-aaaaaaa---aaa-aaattgcctggcatggtggggcacgcat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90227295 137 - 90373283 tgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgagcccaggagtttgacaccagcctgggcaacatagtgagacctcgtcttaa-aaaaaaa---aaa-aaattgcctggcgtggtggcgcacgcat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 129426 136 + 156971 tgcctgcaatcccagcactttgggaggctgaggcaggaggatcacttgaacccaggagtttgagaccagcctgggcaacatagtgagacctcgtctt-t-aaaaaaa---aaa-aaattgcctggcatggtggggcacacat i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479380 132 - 5823884 tgcctgtaatcccagcactttgggaggctgaggcaggaggatcacttgagcccaggagtttgagaccagcctgggcaatatagtgagacctcgtctt-t-----aaa---aaa-agattgcctggtgtggtagcgcacgcat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130422 130 + 159171411 tgcctgtcatcccagcgctttggggggctgaggcgggaggatcacttgagcccaggagcttgagagcagcctgggcaacatactgagaccctgtctt-a-aaaaaaa---aaa-aaattgcctggcgtggtg------gcct i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16196106 133 + 16356641 tgtgtgtcatcccagtgctttgggaggctgaggcgggcggatcacttgagtccaggagtttgagagcagcctgggcaacatagtgagaccctgtctt-----taaaa---aaa-aaattgcctggcgtggtgacgcacacgt i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595386 134 + 11732439 tgcctgtcatcccagcgctttgggaggctgaggcgggaggatcacttgagcccaggagtttgagagcagcctgggcaacatagtgagaccctgtctt-----taaaa---aaacaaattgcctggcgtggtgacacacacct i aotNan1.NW_018500483v1 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e macNem1.NW_012014244v1 16793330 4308 - 16982598 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e otoGar3.GL873542 22762727 0 + 22939663 C a score=909927.000000 s hg38.chr20_KI270870v1_alt 8142 147 + 183433 gtagtcccagctactccagagcctgatgtggggggattgcttgagctcaggaagtcgaagctgcagtgagccgtgaccccaccacagcactccagcctgggcagcagagtgagatcccttctcaatt---------aaa-aaaaaaaaaattgaagc s panTro5.chr20 66309733 146 + 66533130 gtagtcccagctactccagagcctgatgtggggggattgcttgagctcaggaagtcgaagctgcagtgagccgtgaccgcaccacagcactccagcctgggcagcagagtgagatcccttctcaatt----------aa-aaaaaaaaaattgaagc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020418 144 + 62195757 gtagtcccagctactccagagcctgatgtggggggattgcttgagctcaggaagtcgaagctgcagtgagccgtgaccgcaccacagcactccagcctgggcagcagagtgagatcccttgtcaatt-------------aaaaaaaaaatggaagc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 409880 156 - 578057 gtagtcccagctactccagagcctgatgtggggggattgcttgagctcaggaagtcgaagctgcagagagccgtgaccgcaccacagcactccagcctgggcagcagagtgagatctcttctcaatcaaaaaaaaaaaa-aaaaaaaaaaTTGAAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109936098 145 - 110113093 gtagtcccagctactccagaggctgatgtggggggattgcttgagctcaggaggtggaagctgcagtgagccgtgaccgcaccacagcactccagcctgggcaacacagtgagaccccttctcaa-----------aaa-aaaaaaaaaattgaagc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92663455 145 - 92844088 gtggtcccagctactccagaggctgatgtgggaggattgcctgagctcaggaagtcgaatctgctgtgagccatgaccgcaccacggcactccagcctggtcaacagagtgagaccccttctcgatt-----------t-aaaaaaaatattgaagc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96325006 145 + 96509753 gtggtcccagctactccagaggctgatgtgggaggattgcctgagctcaggaagtcgaatctgctgtgagccgtgaccgcaccacggcactccagcctggtcaacagagtgagaccccttctcgatt-----------t-aaaaaaaagattgaagc i macFas5.chr10 C 0 I 1280 s cerAty1.NW_012001373v1 3604851 145 - 3785965 gtggtcccagctactccagaggctgatgtgggaggattgcctgagctcaggaagtcgaatctgctgtgagccgtgaccgcaccacggcactccagcctggtcaacagagtgagaccccttctcgatt-----------t-aaaaaaaatattgaagc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90227432 145 - 90373283 gtggtcccagctactccagaggctgatgtgggaggattgcctgagctcaggaagtcgaatctgccgtgagccgtgaccgcaccacggcactccagcctggtaaacagagtgagaccccttctcgatt-----------t-taaaaaaatattgaagc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 129562 146 + 156971 gtggtcccagctactccagaggctgatgtgggaggattgcctgagctcaggaagtcgaatctgctgtgagccgtgaccgcaccacggcactccagcctggtcaacagagtgagaccccttctcgatt-----------taaaaaaaaatattgaagc i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479512 145 - 5823884 gtggtcccagctactccagaggctgatgtgggaggattgcctgagctcaggaagtcgaatctgccgtgagctgtgaccgcaccacagcactccagcctggtcaacagagtgagaccccttctcgatt-----------t-aaaaaaaatattgaagc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130552 136 + 159171411 gtggtctcagctactcccgaggctgatgtgggaggatagcttgaactcgggaagtcgaagctgcagtgagctgtgacc--------gcactccagcctgggtgacagaatgagaccccttctcaatt-------------taaaaaaaaaatgaagc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16196239 137 + 16356641 gtggtcgcagctactcccgaggctgatgtgggaggatagtctgagctcggggattcgaagctgcagtgagctgtgacc--------acactccagcctgggtgacag--tgagaccccttctcaatt---------aaa-aaaaaaaaaaatgaagc i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595520 140 + 11732439 gtggtcgcggctactcccgaggctgatgtgggaggatagcttgagctcgggaagtcgaagctgcagtgagctgtgact--------gcactccagcctgggtgacagagtgagacccctttgcaatt--------taaa-aaaataaaaaaagaagc i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762727 33 + 22939663 GTAGCCACAGCTCCT------------------------------------GAGTGGgggctg------gccttg---------------------------------------------------------------------------------- i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e macNem1.NW_012014244v1 16793330 4308 - 16982598 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I a score=89389.000000 s hg38.chr20_KI270870v1_alt 8289 11 + 183433 aaaagaaaaaT s panTro5.chr20 66309879 11 + 66533130 aaaagaaaaaT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020562 11 + 62195757 aaaagaaaaaT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410036 10 - 578057 AAAAG-AAAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109936243 11 - 110113093 aaaagaaaaaT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92663600 11 - 92844088 gaaagaaaaat i rheMac8.chr10 C 0 I 310 s macFas5.chr10 96326431 11 + 96509753 aaaagaaaaat i macFas5.chr10 I 1280 C 0 s macNem1.NW_012014244v1 16797638 11 - 16982598 aaaagaaaaat i macNem1.NW_012014244v1 I 4308 C 0 s cerAty1.NW_012001373v1 3604996 11 - 3785965 gaaagaaaaat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90227577 11 - 90373283 aaaagaaaaat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 129708 11 + 156971 gaaagaaaaaT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479657 11 - 5823884 aaaagaaaaat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130688 11 + 159171411 aaaggagaaaT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16196376 11 + 16356641 aaaaGGAAAAT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595660 11 + 11732439 aaaagaaaaaT i aotNan1.NW_018500483v1 C 0 C 0 e canFam3.chr24 47537240 1720 + 47698779 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e otoGar3.GL873542 22762760 0 + 22939663 C a score=1502409.000000 s hg38.chr20_KI270870v1_alt 8300 213 + 183433 AAACCGTCTACAGcccccgagtgtgggctggacatgtgacttgcttccaatgcacagaatgtagtagaagggaaggcaa-gtggcttcggaatcttggcc-tcaaatgtatt-gaggcttcctcttggctcccccctgggtcgctggctcctccctgggtcgctggctcctccctgggtcgctggctctgggggacccagtgccatgtttcgagga s panTro5.chr20 66309890 175 + 66533130 AAACCATCTACAGcccccgagtgtgggctggacatgtgacttgcttccaatgcacagaatgtagtagaagggaaggcaa-gtggcttcggaatcttggcc-tcaaatgtatt-gaggcttcctcttggctccc--------------------------------------ccctgggtcgctggctctgggggacccagtgccatgtttcgagga i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020573 213 + 62195757 AAACCGTCTACAGcccctgagtgtgggctggacatgtgacttgcttccaatgcactgaatgtagtagaagggaaggcaa-gtggcttcggaatcttggcc-tcaaatgtatt-gaggcttcctcttggctcccccctgggtcgctggctcccccctgggtcgctggctcccccctgggtcgctggctctgggggacccagtgccatgtttcgagga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410046 175 - 578057 AAACCGTCTACAGcccccgagtgtgggctggacatgtgacttgcttccaatgcacagaatgtagtagaagggaaggcaa-gtggcttcggaatcttggcc-tcaaatgtatt-gaggcttcctcttggctccc--------------------------------------ccctgggtcgctggctctgggggacccagtgccatgttttgagga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109936254 193 - 110113093 AAACCGTCTACAGcccccgagtgtgggctggacatgtgacttgcttccaatgcacagaatgtagtagaagggacggcaa-gtggctttggacacttggcc-tcaaatgtatt-gaggcttcctcttggctcccccctgggtcgctggctcc--------------------ccctgggtcgctggctctgggggacccagtgccatgtttcgagga i nomLeu3.chr13 C 0 M 100 s rheMac8.chr10 92663921 175 - 92844088 aaaCAGTCTGCAGcccccgagtgtgagctggacctgtgacttgcttccaatacacagaatgtagtagaagggatggcaa-gtggctccggacacttggcc-tcaaatgtgtt-gaggcgtcctcttggctccct--------------------------------------cctgggtcgctggctctgggggacccagtgccatgttttgagga i rheMac8.chr10 I 310 C 0 s macFas5.chr10 96326442 175 + 96509753 aaaCAGTCTGCAGcccccaagtgtgagctggacctgtgacttgcttccaatacacagaatgtagtagaagggatggcaa-gtggctccggacacttggcc-tcaaatgtgtt-gaggcgtcctcttggctccct--------------------------------------cctgggtcgctggctctgggggacccagtgccatgttttgagga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16797649 194 - 16982598 aaaCAGTCTGCAGcccccgagtgtgagctggacctgtgacttgcttccaatacacagaatgtagtagaagggatggcaa-gtggctccagacacttggcc-tcaaatgtgtt-gaggcgtcctcttggctccctcctgggtcgctggct-------------------cccccctgggtcgctggctctgggggacctagtgccatgttttgagga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3605007 195 - 3785965 aaaCAGTCTACAGcccccgagtgtgagctggacctgtgacttgcttccaatacacagaatgtagtagaagggatggcaa-gtggctccggacacttggcc-tcaaatgtgtt-gaggcgtcctcttggctccctcctgggtcgctggctc------------------cccccctgggtcgctggctctgggggacccagtgccatgttttgagga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90227588 194 - 90373283 aaaCAGTCTACAGcccccgagtgtgagctggacctgtgacttgcttccaatacacagaatgtagtagaagggatggcaa-gtggctccggacacttggcc-tcaaatgtgtt-gaggtgtcctcttggctccctcctgggtcgctggct-------------------ccccgctgggtcgctggctcggggggacccagtgccatgttttgagga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 129719 194 + 156971 AAACAGTCTACAGcccccgagtgtgagctggacctgtgacttgcttccaatacacagaatgtagtagaagggatggcaa-gtggctcccgacacttggcc-tcaaatgtgtt-gaggcgtcctcttggctccctcctgggtcgctggct-------------------cccccctgggtcgctggctctgggggacccagtgccatgttttgagga i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479668 175 - 5823884 aaaCAGTCTACAGcccccaagtgtgggctggacctgtgacttgcttccaatacacagaatgtagtagaagggatggcaa-gtggctccagacacttggcc-tcaaatgtgtt-gaggcgtcctcttggctcccc--------------------------------------cctgggtcgctggctctgggggacccagtgccatgttttgagga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130699 169 + 159171411 GAACTGTCTACAGcccctgagttcggggtgcacatgtgatttgcttccaatgcacagaat------gaagggaccgcag-acggctcctgacacttggcc-tccaatgtgtt-gaggcttcctctttgctccct--------------------------------------cctgggtcactggctctgggggacccagtgccatgttccgagga i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16196387 162 + 16356641 GAACTGTCTACAGCCCCTGAGTGCCGGGTGGACATgtgacttgcttccaatgcacggaat------gaagggactgcag-acggtc-------cttggcc-tcaaatgtgtt-gaggcttcctcttggctccct--------------------------------------cctgggtcactggctctgggggacccagtgccatgttccgagga i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595671 169 + 11732439 GAACTGTCTATAGcccctgagtgcagggtgggcatgtgacttgcttccaatgcacagaat------gaagggaccgcag-acggctcctgacacttggcc-ttaaatgtgtt-gaggcttccccttggctccct--------------------------------------cctgggtcactggctctgggagacccagtgccatgttcccagga i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762760 129 + 22939663 -----------------------------------gtgacttgc-tctagtgcacagaatgtggtggaagggaccctgatgtgaccgctgagatgtggtcaccaaaggccttggaagtgtccttttggctctct--------------------------------------cctggacctct-------------cagctgccatgttgtgagga i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47538960 160 + 47698779 AAAACGTCCACAGcccccgagtgtgggc-ggcctggtgacctgcttctaatgaccagaatgt------------ggcaa-aggccttccaaga--tggtc-ttaatggtgtc-gaggcctcctcttgcctctcc--------------------------------------ttcccaccactcgccctgcaggaccagccgccccgcggtgaggt i canFam3.chr24 I 1720 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I a score=131040.000000 s hg38.chr20_KI270870v1_alt 8513 18 + 183433 ----cactcagcccc-tgaagca s panTro5.chr20 66310065 18 + 66533130 ----cactcagcccc-tgaagca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020786 18 + 62195757 ----cactcagcccc-tgaagca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410221 18 - 578057 ----cactcagcccc-tgaagca i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92664096 18 - 92844088 ----cactcagcccc-tgaagca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96326617 18 + 96509753 ----cactcagcccc-tgaagca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16797843 18 - 16982598 ----cactcagcccc-tgaagca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3605202 18 - 3785965 ----cactcagcccc-tgaagca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90227782 18 - 90373283 ----cactcagcccc-tgaagca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 129913 18 + 156971 ----cactcagcccc-tgaagca i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479843 18 - 5823884 ----cactcagctcc-tgaagct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130868 18 + 159171411 ----tactcagccca-tgaagca i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16196549 18 + 16356641 ----tacccagccgc-tgaagca i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595840 18 + 11732439 ----tacttggcccc-tgaagca i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762889 10 + 22939663 ----cacccag---------aca i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47539120 23 + 47698779 cacccaagcagccctggggagag i canFam3.chr24 C 0 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e dasNov3.JH569290 179382 86 - 397369 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e nomLeu3.chr13 109936447 100 - 110113093 M a score=657798.000000 s hg38.chr20_KI270870v1_alt 8531 96 + 183433 tccatgtgttgaggagcagaggcctcctgcc-catagccatggaaggaa-gacttctcagaagaagata-ccccagcccctgcccagccttcagagggt s panTro5.chr20 66310083 96 + 66533130 tccatgtgttgaggagcagaggcctcctgcc-catagccatggaaggaa-gacttctcagaagaagata-ccccagcccctgcccagccttcagagggc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020804 96 + 62195757 tccatgtgttgaggagcagaggcctcctgcc-catagccatggaaggaa-gacttctcagaagaagata-ccccagcccctgcccagccttcagagggc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410239 96 - 578057 tccatgtgttgaggggcagaggcctcctgcc-cgtagccatggaaggaa-gacttctcagaagaagata-ccccagctgctgcccagccttcagagggc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92664114 96 - 92844088 tccatgtggtgaggagcagaggcctcctgcc-cgtagccaagggaggga-gacttctcagaaggagata-ccccagcccctgcccaggcttccgagggc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96326635 96 + 96509753 tccatgtggtgaggagcagaggcctcctgcc-cgtagccaagggaggga-gacttctcagaaggagata-ccccagcccctgcccaggcttccgagggc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16797861 96 - 16982598 tccatgtggtgaggagcagaggcctcctgcc-cgtagccaagggaggga-gacttctcagaaggagata-ccccagcccctgcccaggcttccgagggc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3605220 97 - 3785965 tccatgtggtgaggagcagaggcctcctgcc-ggtagccacgggaggga-gacttctcagaaggagatacccccagcccctgcccaggcttccgaggcc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90227800 96 - 90373283 tccatgtagtgaggagcagaggcctcctgcc-catagccacgggaggga-gacttctcagaaggagata-cctcagcccctgcccaggcttccgagggc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 129931 96 + 156971 tccatgtggtgaggagcagaggcctcctgcc-catagccacgggaggga-gacttctcagaaggagata-ccccagcccctgcccaggcttccgaggcc i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5479861 96 - 5823884 tccatgtggtgaggagcagaggcctcctgcc-cgtagccgcgggaggga-gacttctcagaaggagata-ccccagcccctgcccaggcttctgagggc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58130886 93 + 159171411 tccatgtagtgaggaacagaggacttctgccaggtgggcgggggatgga-gacttctcag---aagatg-tcccagtacctgcccaatattcagatgc- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16196567 93 + 16356641 tctatgtaatgaggagcagaggcctcctgccaggcgggcaggggaggga-gacttctcag---gagatg-tcccagcacctgcccaatattcagatgc- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2595858 95 + 11732439 tccatgtagtgaggaacagaggcctcctgccaggtgggccggtg-ggga-gacttctcagaatgagatg-tcctggcacctgcccaatgttcagatgc- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22762899 96 + 22939663 gctctgcagagggggcctaaggcctcctgcc--aaaactgtgtcagggactccttcttagaagcagctc-ctccatgtcctgcccagccttcagatgac i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47539143 72 + 47698779 tccatgcggtgagga----------------------ccacgggaggg--gcctccttggaagcagcac-ctgcag--ccggaccggcccccagggccc i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 179468 87 - 397369 TCCCTGTg-cgaggaactgagccctcctgcc-gatggctgtg---agga-ggctgcctggaaccggctt-ctccggccacagttgagggtccag----- i dasNov3.JH569290 I 86 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e cebCap1.NW_016107870v1 1055695 2137 + 1231380 I e nomLeu3.chr13 109936447 100 - 110113093 M a score=2373975.000000 s hg38.chr20_KI270870v1_alt 8627 263 + 183433 cagggcctgggccaaggtcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaagccacttt-aattcttgaaccacagaa---gtgaaatagtaga----agttgtcttaagcggctaagttttggagaaatttgttattcagcaacagatatctaatacaATGTTGTCAGGGAGGATAAGTGG----ATGGAGATGGCCGT-GGCGTGTTT--GGCTGGCTAGCACGGAGGAGGGG-CACTGCTGCAGGCCTGAGCCG-AGTGGGCT--------- s panTro5.chr20 66310179 266 + 66533130 cagggcctgggccaacgtcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaagccacttt-aattcttgaaccacagaagctgtgaaatagtaga----agttgttttaagcggctaagttttggagaaatttgttattcagcaacagatatctaatacaATGTTGTCAGGGAGGATAAGTGG----ATGGAGATGGCCCT-GGCGTGTTT--GGCTGGCTAGCACGGAGGAGGGG-CACTGCTGCAGGCCTGAGCCG-AGTGGCCT--------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62020900 266 + 62195757 cagggcctgggccaacgtcctgactgcaacctcaggagagaccctgagccagaagcac-ccaaaaagccacttt-aattcttgaaccacagaagctgtgaaatagtaga----agttgttttaagcggctaagttttggagaaatttgttattcagcaacagatatctaatacaATGTTGTCAGGGAGGATAAGTGG----ATGGAGATGGCCCT-GGCGTGTTT--GGCTGGCTAGCACGGAGGAGGGG-CACTGCTGCAGGCCTGAGCCG-AGTGGGCT--------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410335 265 - 578057 cagggcctgggccaacgtcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaagccacttt-aattcttgaaccacagaagctgtgaaatagtaga----agttgttttaagcggctaagttttggagaaatatgttattcagcaacagatatctaatacaATGTTGTCA-GGAGGATAGGTGG----ATGGAGATGGCCCT-GGCATGTTT--GGCTGGCCAGCACGGAGGAGGGG-CACTGCTGCAGGCCTGAGCCG-AGTGGGCT--------- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92664210 266 - 92844088 cagggctttggccaacatcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaagccacttt-aattcttgaaccacagaagctgtgaaatagaaga----agttgttttaagctgctgagttttggagacatttgttatgcagcaacagataactaatacaATGTTGTCAGGGAGGATAAGTGG----ATGGAGACAGCCCT-GGCGTGTTT--GGCTGGCTAGCACGGAGGAGGGG-CACTGATGCAGGCCTGAGCTG-AGGGGGCT--------- i rheMac8.chr10 C 0 I 24 s macFas5.chr10 96326731 266 + 96509753 cagggccttggccaacgtcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaagccacttt-aattcttgaaccacagaagctgtgaaatagaaga----agttgttttaagctgctgagttttggagacatttgttatgcagcaacagataactaatacaATGTTGTCAGGGAGGATAAGTGG----ATGGAGACAGCCCT-GGCGTGTTT--GGCTGGCTAGCACGGAGGAGGGG-CACTGATGCAGGCCTGAGCTG-AGGGGGCT--------- i macFas5.chr10 C 0 I 24 s macNem1.NW_012014244v1 16797957 266 - 16982598 cagggccttggccaacgtcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaagtcacttt-aattcttgaaccacagaagctgtgaaatagaaga----agttgttttaagctgctgagttttggagaaatttgttatgcagcaacagataactaatacaATGTTGTCAGGGAGGATAAGTGG----ATGGAGACAGCCCT-GGAGTGTTT--GGCTGTCTAGCACGGAGGAGGGG-CACTGATGCGGGCCTGAGCTG-AGGGGGCT--------- i macNem1.NW_012014244v1 C 0 I 24 s cerAty1.NW_012001373v1 3605317 266 - 3785965 cagggccttggccgacgtcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaggccacttt-aattcttgaaccacagaagctgtgaaatagaaga----agttgttttaagctgctgagttttggagaaatttgttatgcagcaacacagaactaatacaATGTTGTCAGGGAGGATAAGTGG----ATGGAGACAGCCCT-GGCGTGTTT--GGCTGGCTAGCACGGAGGAGGGG-CACTGATGCAGGCCTGAGCTG-AGGGGGCT--------- i cerAty1.NW_012001373v1 C 0 I 24 s chlSab2.chr2 90227896 266 - 90373283 cagggccttggccatcgtcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaagccacttt-aaatcttgaaccacagaagctgtgaaatagtaga----agttgttttaagctgttgagttttggagaaatttgttatgcagcaacagataactaatacaATGTTGTCAGGGAGGATAAGTGG----ATGGAGACAGCCCT-GGCGTGTTT--GGCTGGTTAGCACAGAGGAGGGG-CACTGATGCAGGCCTGAGCCG-AGGGGGCT--------- i chlSab2.chr2 C 0 I 24 s manLeu1.NW_012101369v1 130027 266 + 156971 cagggccttggccaacgtcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaagccacttt-aattcttgaaccacagaagctgtgaaatagaaga----agttgttttaagctgctgagttttggagaaatttgttatgcagcaacacagaactaatacaATGTTGTCAGGGAGGATAAGTGG----ATGGAAACAGCCCT-GGTGTGTTT--GGCTGGCTAGCACGGAGGAGGGG-CACTGATGCAGGCCTGAGCTG-AGGGGGCT--------- i manLeu1.NW_012101369v1 C 0 I 24 s colAng1.NW_012114444v1 5479957 266 - 5823884 cagggccttggccaacgtcctgactgcaacctcaggagagaccctgagccagaaccac-ccaaaaagccacttt-aattcttgaaccacagaagctgtgaaatagtaga----agttgttttaagctgctgagttttggagaaatttgttatgcagcaacagataactaatacaATGTTGTCAGGGAGGATAAGTGT----ATGGAGACAGCCTT-GGCGTGTTT--GGCTGGCTAGCACGGAGGAGAGG-CACTGATGCAGGCCTGAGCCG-AGGGGGCT--------- i colAng1.NW_012114444v1 C 0 I 24 s calJac3.chr5 58130979 230 + 159171411 cagggccttggccaatgtcctgaccgcaacctgatg-------------------------aaaATGCCACTTT-Aattcttgaaccacagaagctgtgaaatagt-------tgttgttttaaactgctaggttttggagaaatttgttacacagcagcagatagctaatacaGTGTCGTTAGGGAAAGTGACTGG----ATGGAGTTGGCCC----------T--GGCTGACTTGCTCTGAGGAGGGG-CACTGAGGCAGCCTTGAGCTG-TCGGGGCT--------- i calJac3.chr5 C 0 I 24 s saiBol1.JH378156 16196660 258 + 16356641 caaggcctcggccaatgtcctgactgcaacctgatgagagaccccgagccagaaccac-ccaaaatgccacttt-aattcttgaaccacagaagctgtgaaatagt-------tgttgttttaagctgctaggttctggagaaatttgttacacagcagcagacagctaa-----tGTCGTCAGGGAAGGTGACTGG----ATGGAGCTGGCCCT-GGCATGTTT--GGCTGACTCACTCTGAGGAGGGG-CACTGAGGCAGCCTTGAGCTG-TCTGGGCT--------- i saiBol1.JH378156 C 0 I 24 s cebCap1.NW_016107870v1 1057832 251 + 1231380 cagggcctccgccaatgtcctgactgcaacctgatgagagaccctgagccagaaccac-ccaaaatgccacttt-aattcttgaaccactgaagctgtgaaata----------gttgttttaagctcctagattttggagaaatttgttacacagcagcagatagctaatacaGTGTCATCAGGGAAGGTGACTGG----ATGGAGCTGGCCCT-GGCATGTTT--GGCCGACTCGCTCTGAGGAGGGG-CACTGAGGCAGCCTTGA----------GCT--------- i cebCap1.NW_016107870v1 I 2137 I 24 s aotNan1.NW_018500483v1 2595953 263 + 11732439 cggggcctcggccaatgtcctgactgcagcctgatgagaggccctgagccagaaccac-ccgaaatgccacttt-aattcttgaaccacagaagctgtgaaatagt-------tgttgttttaagccgctaggttttggagaactttgttacacagcagcagatagctaatacaGCGTCGTCAGGGAAGGTGACTGG----ATGGAGCTGGCCCT-GGCATGTTT--GGCTGACTCGCTCTGAGGAGGGA-CACTGAGGCAGCCTTGAGCTG-TCTGGGCT--------- i aotNan1.NW_018500483v1 C 0 I 24 s otoGar3.GL873542 22762995 222 + 22939663 cagagtcttggccaatgtcttgactgaaaactcaagagacaccctgagccaaaaccac-ccaataagccatttcaaaattctgaccgacagaagttgtgaaataacaag----tgttgttttaagctgctcggttttggagatatttttgatgttgcaataTGTAGGTCCTACAATGCCATCAGGGCAGGTAACAGGTAACATTGAGAGGGC---------------------------------AGGTC-CAATAGTCCA----------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47539215 259 + 47698779 cggagccccagccgggggcccgactgtagcctcgggagagtccccgacccagaaccgctccaaaactgctccca-aattcttgacctgcgggagctatgaaataataaa----tgctgttttaagctgttgggttttggggaaatgtggtgaacagca-tagat------CGCAGCGCTGTCAAGGAAGAGAACAGC----GCAGGGGTGGCCTTCGCCCTGTTT----CAGGCTGAGAGGGAAGAGGGG-AGGTGACGTGGGTCTCGGCGC-CAGGGGCC--------- i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 179555 266 - 397369 --ggaactctaccaacaccctgcctgcgagctcatgaaag-------------accag-ccacactgctccc---agctcctgacccacaggagctgtgcagtaatgaacgtgtgcggtttgaagctgctaagttttggggaaatttgttatgcagca-tagataactgatgcaGTGTTGTCAGGGAGAATAACAGA----AAGTCAGTTACATTCAAATTGCTTCAGACTGGCTAGAGGAGAGGAGGGGAAATTGATGCACCCCTGCGATGTTAAGGGCTGCATGGCCA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I e nomLeu3.chr13 109936447 100 - 110113093 M a score=514438.000000 s hg38.chr20_KI270870v1_alt 8890 54 + 183433 GGAACGCTGGAGTAT-TTG-GTGGATGGGTGGAGGTGGGCATACACCCTGGGACAC----------------------------------------------------------------------- s panTro5.chr20 66310445 54 + 66533130 GGAACACTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCATACACCCTGGGACAC----------------------------------------------------------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021166 54 + 62195757 GGAACGCTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCATACACCCTGGGACAC----------------------------------------------------------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410600 54 - 578057 GGAACGCTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCATACACCCTGGGACAC----------------------------------------------------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109936548 55 - 110113093 GAAACGCTGGAGTACTTTG-GTGGATGGGTGGAGGTGGGCATACACCCTGGGACAC----------------------------------------------------------------------- i nomLeu3.chr13 M 100 C 0 s rheMac8.chr10 92664500 54 - 92844088 GGAGAGCTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCGTACACCGTGAGATGC----------------------------------------------------------------------- i rheMac8.chr10 I 24 C 0 s macFas5.chr10 96327021 54 + 96509753 GGAGAGCTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCGTACACCGTGAGATGC----------------------------------------------------------------------- i macFas5.chr10 I 24 C 0 s macNem1.NW_012014244v1 16798247 54 - 16982598 GGAGAGCTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCATACACCGTGAGATGC----------------------------------------------------------------------- i macNem1.NW_012014244v1 I 24 C 0 s cerAty1.NW_012001373v1 3605607 54 - 3785965 GGAGAGCTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCGTACACCGTGAGATGC----------------------------------------------------------------------- i cerAty1.NW_012001373v1 I 24 C 0 s chlSab2.chr2 90228186 54 - 90373283 GGAGAGCTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCGTACACCCTGGGATGC----------------------------------------------------------------------- i chlSab2.chr2 I 24 C 0 s manLeu1.NW_012101369v1 130317 54 + 156971 GGAGAGCTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCGTACACCGTGAGATGC----------------------------------------------------------------------- i manLeu1.NW_012101369v1 I 24 C 0 s colAng1.NW_012114444v1 5480247 54 - 5823884 GGAGAGCTGGAGTAC-TTG-GTGGATGGGTGGAGGTGGGCGTACACCCTGGAATGC----------------------------------------------------------------------- i colAng1.NW_012114444v1 I 24 C 0 s calJac3.chr5 58131233 54 + 159171411 GGAAAGCTGGGGTAC-TTG-GTGGTTGGGTGGAGGTGGGCATACACCCTGGGACAC----------------------------------------------------------------------- i calJac3.chr5 I 24 C 0 s saiBol1.JH378156 16196942 54 + 16356641 GGAAAGCTGGGGTAC-TTG-GTGGGTGGTCGGAGGTGGGCATACACCCTGGGATAC----------------------------------------------------------------------- i saiBol1.JH378156 I 24 C 0 s cebCap1.NW_016107870v1 1058107 54 + 1231380 GGAAAGCTGGGGTAC-TTG-GTGGGTGGGCGGAGGTGGGCATACACCCTGGGACAC----------------------------------------------------------------------- i cebCap1.NW_016107870v1 I 24 C 0 s aotNan1.NW_018500483v1 2596240 54 + 11732439 GGAAAGCTGGGGTAC-TTG-GTGGATGGGTGGAGGTGGGCATACACCCTGGGGCAC----------------------------------------------------------------------- i aotNan1.NW_018500483v1 I 24 C 0 s otoGar3.GL873542 22763217 48 + 22939663 AGAACACTGGAATGG--------GCTGGTGAGAGGTGGGCAGTTACCTCATGGCAG----------------------------------------------------------------------- i otoGar3.GL873542 C 0 I 5 s canFam3.chr24 47539475 50 + 47698779 GTGTGACTGGGGTGA-GCGTGTGGAAGG-----GGCCGTCACGCACCCTGGGGTGA----------------------------------------------------------------------- i canFam3.chr24 I 1 I 1 s dasNov3.JH569290 179821 125 - 397369 GGGTGGTTGGAGGAT-GTG-ACAGGGTGGGGCAGATGGCCACACACCCTGGGGCCAGGCTGCAGAGGGCCGTGCCCAGGTGTGCCGTGCCAGGAGCAGGTGCTGTCCCTGCTGGCAGTGACAAAGGC i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56779228 2623 + 57149010 I a score=835698.000000 s hg38.chr20_KI270870v1_alt 8944 69 + 183433 CTCGTGGG------GCGGTG----AA---TGGTGG-----------------------GTCCTGTGTGCCGGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- s panTro5.chr20 66310499 69 + 66533130 CTCGTGGG------GCGCTG----AA---TGGTGG-----------------------GTCCTGTGTGCCAGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021220 69 + 62195757 CTCGTGGG------GCGGTG----AA---TGGTGG-----------------------GTCCTGTGTGCCAGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410654 69 - 578057 CTCGTGGG------GTGGTG----AA---TGGTGG-----------------------GCCCTGTGTGCCAGCTGGGCAGATTGATCAGAGCTCTGGGTCATGAG---------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109936603 69 - 110113093 CTCGTGGG------GTGGTA----AA---TGGTGG-----------------------GTCCTGTGTGCCAGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92664554 69 - 92844088 CTCGTGGG------CTGGTG----AA---TGGTGG-----------------------GTCCTGTGTGCCCGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327075 69 + 96509753 CTCGTGGG------CTGGTG----AA---TGGTGG-----------------------GTCCTGTGTGCCCGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798301 69 - 16982598 CTCGTGGG------CTGGTG----AA---TGGTGG-----------------------GTCCTGTGTGCCCGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3605661 69 - 3785965 CTCGTGGG------CTGGTG----AA---TGGAGG-----------------------GTCCTGTGTGCCCGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228240 72 - 90373283 CTCGTGGG------CTGGTG----AATGGTGGTGG-----------------------GTCCTGTGTGCCTGCTGGACAGATTGATCAGAGCCCTGGGTCATGAG---------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130371 69 + 156971 CTTGTGGG------CTGGTG----AA---TGGTGG-----------------------GTCCTGTGTGCCCGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480301 69 - 5823884 CTCGTGGT------CTGGTG----AA---TGGTGG-----------------------GTCCTGTGTGCCCGCTGGACAGATTGATCAGAGCTCTGGGTCATGAG---------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58131287 69 + 159171411 CTTGTGGG------GTGGTA----AA---TGAGGG-----------------------GTCCTGTGTGCCAGCTGGACAGACTAGCCAGAGTTCTGGTTCATGAG---------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16196996 69 + 16356641 CTTGTGAG------GTGGTA----AA---TGAGGG-----------------------GTCCTGTCTGCGAGCTGGACAGACTGCCCAGAGTTCTGGGTCATGAG---------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1058161 69 + 1231380 CTTGCGGG------GTGGTA----AA---TGAGGG-----------------------GTCCTGTGTGCCCACTGGACAGACTGCTCAGAGTTCTGGGTCAGGAG---------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2596294 69 + 11732439 CTTGTGGG------GTGGTA----AA---TGAGGG-----------------------GTCCTGTGTGCCAGCTGGACAGACTGGCCAGAGTTCTGGGTCATGAG---------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56781851 69 + 57149010 CTCGTGGG------GTGGTA----AC---TGGCGG-----------------------GTCCTGCATGCCAGCTGGGTGGACTGGTCAGTGCTCTGGGTCATGAG---------- i micMur3.chr18 I 2623 I 1059 s otoGar3.GL873542 22763270 69 + 22939663 CTCAGGGA------GTGGTA----AG---TGGTGG-----------------------GTCTGGTGTGCTACCTGGACAGACTGGTCAGAGTGCTGGGTCACGAG---------- i otoGar3.GL873542 I 5 C 0 s canFam3.chr24 47539526 59 + 47698779 CTCATGG--------TGGCG----AA---TGGTGG-------------------------------TGCCGGGTGGACACACCAGTCGGAGCTCTGCACCACAAG---------- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 179946 112 - 397369 CCTGTGAGGACAGAGTGATGTCACAG---TGATGGCATCTTTCTGGGGTCCCTTTCTGTTTCTACATGTCAGCTGCACAGACAGGTCAGAGTTTGGGGTTTCAAGTCTCCTGGAA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181723170 860 + 182113224 I a score=1186507.000000 s hg38.chr20_KI270870v1_alt 9013 113 + 183433 GACTGAAACCAACCCAGAACACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAA-------------TGCCAGGCATGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- s panTro5.chr20 66310568 113 + 66533130 GACTGAAACCAACCCAGAACACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAA-------------TGCCAGGCATGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021289 113 + 62195757 GACTGAAACCAACCCAGAACACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAA-------------TGCCAGGCATGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410723 112 - 578057 GACTGAAACCAACCCAGAACACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAA-------------TGCCAGTCATGGAACCAGCTGAGAGCCAT-GGGCCAAGAGTTGGGGCCTGGCTACAGCACACCTGGG----------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109936672 113 - 110113093 GACTGAAACCAACCCAGAGCACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAG-------------TGCCAGGCATGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92664623 113 - 92844088 GACTGAAACCAACCCAGAGCACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAA-------------TGCCAGGCATGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327144 113 + 96509753 GACTGAAACCAACCCAGAGCACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAA-------------TGCCAGGCATGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798370 113 - 16982598 GACTGAAACCAACCCAGAGCACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAA-------------TGCCAGGCATGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3605730 126 - 3785965 GACTGAAACCAACCCAGAGCTCTCACACC-----------------------TC-------------ACTGCCAGGCTGGAATGCCAGGCTGGACTGCCAGGCATGGAACCAGCTGAGAGCCACGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228312 113 - 90373283 GACTGAAACCAACCCAGAGCACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAA-------------TGCCAGGCAGGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130440 126 + 156971 GACTGAAGCCAACCCCGAGCACTCACACC-----------------------TCACTGCCAGGCTGGACTGCCAGGCTGGAC-------------TGCCAGGCATGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480370 113 - 5823884 GATGGAAACCAACCCAGAGCACTCACACC-----------------------TC-------------ACTGCCAGGCTGGAA-------------TACCAGGCATGGAACCAGCTGAGAGCCATGGGGCCAAGAGTCGGGGCCTGGCCACAGCACACCTGGG----------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58131356 112 + 159171411 GACTGAAACCAACCCAGGGGGGTCACACC-----------------------TT-------------GCTGCCAGGCTGGAA-------------TGCCAGGTGTGGAACCAGCTGAGAACCAT-GGGCCAAGGATGGGGGCCTGTCCACGGTGCACCTGGG----------- i calJac3.chr5 C 0 I 12 s saiBol1.JH378156 16197065 112 + 16356641 GACTGAAACCAACCCTGGGGGCTCACGCC-----------------------TG-------------GCTGCCAGGCTGGAA-------------TGCCAGGTGTGGAACCAGCTGAGAACCAT-GGGCCAAGGATGGGGGCCCGGCCACGGCGCACCTGGG----------- i saiBol1.JH378156 C 0 I 12 s cebCap1.NW_016107870v1 1058230 112 + 1231380 GACTGAAACCAACCCAGGGCGCTCACACC-----------------------TG-------------GCTGCCAGGCTGGAA-------------TGCCAGGCATGGAACCAGCTGAGAACCAT-GGGCCAAGGACGGGGACCTGGCCACGGCACACCTGGG----------- i cebCap1.NW_016107870v1 C 0 I 18 s aotNan1.NW_018500483v1 2596363 112 + 11732439 GACTGAAACCAACCCAGGGGGCTCATGCC-----------------------TT-------------GCTGCCAGGCTGGAA-------------TGCCAGGCGTGGAACCAGCTGAGAACCAT-GGGTCAAGGATGGGGGCCTGGCCACGGTGCACCTGGG----------- i aotNan1.NW_018500483v1 C 0 I 12 s otoGar3.GL873542 22763339 110 + 22939663 GACCAAAACTACCCCAGACAACTCATGCT-----------------------GT-------------GCAGCAAGGTTGGG--------------TGCCTG-TGTGGGGCCAGATGAGAGCCATGGCACTAAGAGTGGGGGACTGGTCAGAGCACACTTGG------------ i otoGar3.GL873542 C 0 I 9 s canFam3.chr24 47539585 126 + 47698779 GACGAAAGCCAGTCTGGGCCACCGTGAGCGAGGAGGGCATTGGGGGTCCTGGTG-------------GCTCCCAGGATGGCAC------------CGCTAG-------AGCAGCTGGGAGCC-TGGCACCAAGGGCGGGGAGCCAGCCGGGGC---CCCAGG----------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 180058 104 - 397369 GGCAGTGGGCAGCTCACGGAAC-----CC-----------------------AC-------------A-----AGGCTGGAT-------------CGCTAGGCATGGGGCCAGCTGGGGGCCCCGGGGC-----ATTGGCAGCTG-----AGGGCTTCTGGGCAGTCTGCAGG i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I a score=157991.000000 s hg38.chr20_KI270870v1_alt 9126 21 + 183433 ACCAACCCCT---GGCCCCTCCCA s panTro5.chr20 66310681 21 + 66533130 ACCAACCCCT---GGCCCCTCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021402 21 + 62195757 ACCAACCCCT---GGCCCCTCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410835 21 - 578057 ACCAACCCCT---GGCCCCTCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109936785 21 - 110113093 ACCAGCCCCT---GGCCCCTCCCA i nomLeu3.chr13 C 0 I 1 s rheMac8.chr10 92664736 21 - 92844088 ACCAGCCCCC---GGCCCCTCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327257 21 + 96509753 ACCAGCCCCC---GGCCCCTCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798483 21 - 16982598 ACCAGCCCCC---GGCCCCTCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3605856 21 - 3785965 ACCAGCCCCT---GGCCCCTCCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228425 21 - 90373283 ACCAGCCCCT---GGCCCCTCCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130566 20 + 156971 AACAGCCCC----GGCCCCTCCCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480483 21 - 5823884 ACCAGCCCCT---GGCCCCTCCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58131480 20 + 159171411 ACCAGCCCT----GGCCCCTCCCA i calJac3.chr5 I 12 C 0 s saiBol1.JH378156 16197189 20 + 16356641 ACCAGCCCC----GGCCCCTCCCC i saiBol1.JH378156 I 12 C 0 s aotNan1.NW_018500483v1 2596487 18 + 11732439 ACCGGCCCC----GGCCCTGCC-- i aotNan1.NW_018500483v1 I 12 C 0 s otoGar3.GL873542 22763458 20 + 22939663 ACCTGCTAT----CACTGCTCCCA i otoGar3.GL873542 I 9 C 0 s canFam3.chr24 47539711 22 + 47698779 -GCAGTCTTCAGGGACCTGTCCC- i canFam3.chr24 C 0 I 4 s dasNov3.JH569290 180162 20 - 397369 GACAGGCTCT---GGCCCTGCTC- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1058342 18 + 1231380 I a score=984987.000000 s hg38.chr20_KI270870v1_alt 9147 131 + 183433 CCTGACAGTCAGCGGTCTCTGAACTGCCTGCATTTCATTACCACCCCTCACCCTGCCCCC-----ACCAGAGTTTCAG-CATGCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCCC-GGGAGAGAGAGTTC s panTro5.chr20 66310702 131 + 66533130 CCTGACAGTCAGTGGTCTCTGAGCTGCCTGCATTTCATTACCACCCCTCACCCTGCCCCC-----ACCAGAGTTTCAG-CATGCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCCC-GGGAGAGAGAGTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021423 131 + 62195757 CCTGACAGTCAGTGGTATCTGAGCTGCCTGCATTTCATTACCACCCCTCACCCTGCCCCC-----ACCAGGGTTTCAG-CATGCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCCC-GGGAGAGAGAGTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410856 131 - 578057 CCTGACGGTCAGTGGTCTCTGAGCTGCCTGCATTTCATTACCACCCCTCACCCTGCCCCC-----ACCAGAGTTTCAG-CATGCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCCG-GGGAGAGAGAGTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109936807 131 - 110113093 CCTGACAGTCAGTAGTCTCTGAGCTGCCTGCACTTCATTACCACCCCTCACCCTGCCCCC-----ACCAGAGTTTCAG-CATGCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCCC-GGGAGAAAGAGTTC i nomLeu3.chr13 I 1 C 0 s rheMac8.chr10 92664757 111 - 92844088 CCTGACAG---------------CTGCCTGCACTTCATTACCA-CCCTCACCCTGTCCCC-----ACCAGAGTTTCA-----GCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCAA-CGGAGAAAGAGTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327278 111 + 96509753 CCTGACAG---------------CTGCCTGCACTTCATTACCA-CCCTCACCCTGCCCCC-----ACCAGAGTTTCA-----GCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCAA-CGGAGAAAGAGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798504 111 - 16982598 CCTGACAG---------------CTGCCTGCACTTCATTACCA-CCCTCACCCTGCCCCC-----ACCAGAGTTTCA-----GCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCAA-CGGAGAAAGAGTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3605877 111 - 3785965 CCTGACAG---------------CTGCCTGCCCTTCATTACCA-CCCTCACCCTGCCCCC-----ACCAGAGTTTCA-----GCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCAA-GGGAGAAAGAGTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228446 107 - 90373283 CTTGAGAG---------------CTGCCTGCACTTCATTACC---TCTCACCCTGCCCCC-----ACCAGAGTTTCC-----GCAGCTCCTGCTGGCTGATTACAAGCCCCCGGCCACACTGA-GGGAG--AGAGTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130586 110 + 156971 CCTGACAG---------------CTGCCTGCACTTCATTACCA--CCCCCCCCGGTCCCC-----ACCAGAGTTTCA-----GCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCAA-GGGAGAAAGAGTTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480504 111 - 5823884 CCTGACAG---------------CTGCCTGCACTTCATTACCA-CCCTCACCCTGCCCCC-----ACCAGAGTTTCA-----GCAGCTCCTGCTGGCTGATTACAAGCCCCTGGCCACACCGC-GGGAGAAAGAGTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58131500 125 + 159171411 CCGA-----CAGTGGTATCTGAGCCGCCTGCCTTTCATTACCA----GCA-CCCACCCCCCACCGACCAGAGTTTCAG-CACGCAGCTCCTGCTGGCTGAGTACAAGCCCC-AGCCACACTGT-GGGAGGAAGAGTTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197209 125 + 16356641 CCGGACAGTCAGTGGTGTCTGAACCGCCTGCCCTTCATTACCA----GCA-CCCGCCCCC-----ACCAGAGTTTCAG-TGTGCAGCTCCTGCTGGCTGAGTACAAGCCCC-AGCCACACCGT-GGGAGGAAGAGTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1058360 126 + 1231380 CCCGACAGTCAGTGGTGTCTGAGCTGCTTGCCCTTCATTACCA----GCACCCCGCCCCC-----ACCAGAGTTTCAG-CACGCAGCTCCTGCTGGCTGAGTACAAGCCCC-AGCCACACCGT-GAGAGGAAGAGTTC i cebCap1.NW_016107870v1 I 18 C 0 s aotNan1.NW_018500483v1 2596505 126 + 11732439 CCCGACAGTCAGTGGTGTCTGAGCCGCCTGCCCTTCATTAGCA----GCACCCCGCCCCC-----ACCGGAGTTTCAG-CACGCAGCTCCTGCTGGCTCAGTACAAGCCCC-AGCCACACTGT-GGGAGGAAGAGTTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22763478 97 + 22939663 CCTGGTAGCTGATGGTTCCTGAGCAGCCTGTACTTCA-----------------GAGCCC----------------------ACAGTGTCTGCTGGCTAAGTCTAGGCCCA-GGCCACCCCAG-GCAGGAAGGAATTC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47539737 110 + 47698779 CCCGCCCG---------------CAGCCAGCACCTGAGCATCC----CCACTCTGGCCCC--------GGAGGTTCAG-CACGGAGCTCCTGCTGGATGAATCTAGGCTCCGGGCCACACCCCAGGGAGGAAGGGGCC i canFam3.chr24 I 4 C 0 s dasNov3.JH569290 180182 109 - 397369 -CTCAGCATCAGTGGTCTCTGGTCAGCCTGCACCTCGGCACCT--CGGCA------CCTC-----CCTGGAGCCTGTGCCGTGGAGCCTCTGCCAGCTGAGCCCAAGCCCCAGGCCCCAGCCC--------------- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I a score=1071138.000000 s hg38.chr20_KI270870v1_alt 9278 75 + 183433 CAGGTGCCAGCCTGTCCAAGTGATGGATGGTCCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT s panTro5.chr20 66310833 75 + 66533130 CAGGTGCCAGCCTGTCCAAGTGATGGATGGTCCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021554 75 + 62195757 CAGGTGCCAGCCTGTCCAAGTGATGGATGGTCCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 410987 75 - 578057 CAGGTGCCAGCCTGTCCAAGTGATGGATGGTCCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109936938 75 - 110113093 CAGGTGCCAGCCTGTCCAAGTGACGGATGGTCCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92664868 75 - 92844088 CAGGTGCCAGCCTGTCCAAGTGACGGATGGTCCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327389 75 + 96509753 CAGGTGCCAGCCTGTCCAAGTGACGGATGGTCCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798615 75 - 16982598 CAGGTGCCAGCCTGTCCAAGTGACGGATGGTCCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3605988 75 - 3785965 CAGGTGCCAGCCTGTCCAAGTGACGGATGGTTCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228553 75 - 90373283 CAGGTGCCAGCCTGTCCAAGTGACGGATGGTCCCTAAGCTGTGGTGGCCCAGGGGTCCTGGCAAAAGGGCCCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130696 75 + 156971 CAGGTGCCAGCCTGTCCAAGTGACGGATGGTCCCTAGGCTGCGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480615 75 - 5823884 CAGGTGCCAGCCTGTCCAAGTGACAGATGGTCCCTAGGCTGTGGTGGCCCAGAGGTCCTGGCAAAAGGGCCCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58131625 75 + 159171411 CAGGCACCAGCCTGTCCAAGTGACAGATGGTCTCTAGGCCATGGTGGCCCAGAGGTCCTGGAGGAAGGGCCCTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197334 75 + 16356641 CAGGCACCAGCCTGTCCAAGTGACAGATGGTCCCTAGGCCATGGTGGCCCAGAGGTCCTGGTGGAAGGGCCCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1058486 75 + 1231380 CAGGTGCCAGCCTGTCCAAGTGACAGATGCTCCCTAGGCCATGGTGGCCCAGAGGTCCTGGCAGAAGGGCCCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2596631 75 + 11732439 CAGGTGCCAGCCTGTCCAAGTGACAGATGGTCCCTAGGCCATGGTGGCCCAGAGGTCCTGGCGGAAGGGCCCCGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1783320 75 - 2029793 CAGGTGCCAGCCTGTCCAAGTGACGGGTGGCCCGTAGCCTGTGGTGGCCCATAGGTCCTGGCAGAAGGGCCCTGT i proCoq1.NW_012150197v1 N 0 I 409 s otoGar3.GL873542 22763575 75 + 22939663 TAGATACCAAACTTTCCAGGTGACAGATGGCACCTAGACTGTGGTGGCCTAGAGGCCCTGACACAAGGGCTCTGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47539847 54 + 47698779 CAGATGCC---------------------CCCCGCAGACTGTGGGCATCCAGAGGTCCTGGCAGGAAGGCCCTGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 180291 73 - 397369 TAGATGCTGGCCAGTCCATGGGACAGAGCCCCTCTAGACTGTGG-GGTCCAGAGGTCTAGGCAGAA-GGCCCTGT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I a score=205807.000000 s hg38.chr20_KI270870v1_alt 9353 20 + 183433 AGCCTCTAGTAAAGTATGAG s panTro5.chr20 66310908 20 + 66533130 AGCCTCTAGTAAAGTATGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021629 20 + 62195757 AGCCTCTAGTAAAGTATGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411062 20 - 578057 AGCTTCTAGTAAAGTATGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937013 20 - 110113093 AGCCTCTAGCAAAGTATGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92664943 20 - 92844088 ACCCTCTAGCAAAATATGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327464 20 + 96509753 ACCCTCTAGCAAAATATGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798690 20 - 16982598 ACCCTCTAGCAAAATATGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606063 20 - 3785965 ACCCTCTAGCAAAATATGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228628 20 - 90373283 ACCCTCTAGCAAAATATGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130771 20 + 156971 ACCCTCTAGCAAAATATGAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480690 20 - 5823884 ACCCTCTAGCAAAATATGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58131700 20 + 159171411 ACCCTGTAGCAAACTATGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197409 20 + 16356641 GTCCTGTAGCAAACTATGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1058561 20 + 1231380 ACCCTGTAGCAAACTATGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2596706 20 + 11732439 ACCCTGTAGCAAGCTATGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22763650 20 + 22939663 GTCCTGTAGCAGAATATAAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47539901 20 + 47698779 GTCCTCCAGCAGGGTATGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 180364 11 - 397369 GCCCCCTAGGA--------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I a score=46148.000000 s hg38.chr20_KI270870v1_alt 9373 4 + 183433 AGGA s panTro5.chr20 66310928 4 + 66533130 AGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021649 4 + 62195757 AGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411082 4 - 578057 AGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937033 4 - 110113093 AGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92664963 4 - 92844088 AGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327484 4 + 96509753 AGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798710 4 - 16982598 AGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606083 4 - 3785965 AGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228648 4 - 90373283 AGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130791 4 + 156971 AGGA i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58131720 4 + 159171411 AGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197429 4 + 16356641 AGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1058581 4 + 1231380 AGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2596726 4 + 11732439 AGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22763670 4 + 22939663 GGGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47539921 3 + 47698779 -GGG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 180375 2 - 397369 --GA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I a score=104419.000000 s hg38.chr20_KI270870v1_alt 9377 11 + 183433 GCATCGGCCAC s panTro5.chr20 66310932 11 + 66533130 GCATCGGCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021653 11 + 62195757 GCATCGGCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411086 11 - 578057 GCATTGGCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937037 11 - 110113093 CCGTCGGCCAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92664967 11 - 92844088 CCATCGGCCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327488 11 + 96509753 CCATCGGCCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798714 11 - 16982598 CCATCGGCCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606087 11 - 3785965 CCATCGGCCAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228652 11 - 90373283 CCATCGGCTAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130795 11 + 156971 CCATCGGCCAC i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58131724 11 + 159171411 CCACTGGCCAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197433 11 + 16356641 CCATCGGCCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1058585 11 + 1231380 CCATTGGCCAC i cebCap1.NW_016107870v1 C 0 I 238 s aotNan1.NW_018500483v1 2596730 11 + 11732439 CCGTCGGCCAC i aotNan1.NW_018500483v1 C 0 I 60 s otoGar3.GL873542 22763674 11 + 22939663 GCATAGGCCAC i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 180377 11 - 397369 GCACAGACCAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I a score=27406.000000 s hg38.chr20_KI270870v1_alt 9388 4 + 183433 AGCA s panTro5.chr20 66310943 4 + 66533130 AGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021664 4 + 62195757 AGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411097 4 - 578057 AGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937048 4 - 110113093 AGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92664978 4 - 92844088 AGCA i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96327499 4 + 96509753 AGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798725 4 - 16982598 AGCA i macNem1.NW_012014244v1 C 0 I 2 s cerAty1.NW_012001373v1 3606098 4 - 3785965 AGCA i cerAty1.NW_012001373v1 C 0 I 2 s chlSab2.chr2 90228663 4 - 90373283 AGCA i chlSab2.chr2 C 0 I 2 s manLeu1.NW_012101369v1 130806 4 + 156971 AGCA i manLeu1.NW_012101369v1 C 0 I 2 s calJac3.chr5 58131735 4 + 159171411 GGCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197444 4 + 16356641 GGCC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22763685 4 + 22939663 TGCA i otoGar3.GL873542 C 0 I 1 s dasNov3.JH569290 180388 4 - 397369 AGCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I a score=1500.000000 s hg38.chr20_KI270870v1_alt 9392 1 + 183433 G s panTro5.chr20 66310947 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021668 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411101 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937052 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s dasNov3.JH569290 180392 1 - 397369 G i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e manLeu1.NW_012101369v1 130810 2 + 156971 I e saiBol1.JH378156 16197448 0 + 16356641 C e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131739 0 + 159171411 C e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327503 0 + 96509753 C a score=-12737.000000 s hg38.chr20_KI270870v1_alt 9393 18 + 183433 GGGTG-TAC-------------AGGCCA-TGGC s panTro5.chr20 66310948 18 + 66533130 GGGGG-TAC-------------AGGCCA-TGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021669 32 + 62195757 GGGGG-TACGGAGGGAGCGACGAGGCCAGTGGC i panPan2.chr20 C 0 I 3 s gorGor5.CYUI01015848v1 411102 19 - 578057 GGGGGATAC-------------AGGCCA-TGGC i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chr5 58131739 2 + 159171411 -----------------------------TG-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197448 4 + 16356641 -----------------------------TGGG i saiBol1.JH378156 C 0 C 0 s dasNov3.JH569290 180393 3 - 397369 GGA------------------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e manLeu1.NW_012101369v1 130810 2 + 156971 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937053 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327503 0 + 96509753 C a score=2133.000000 s hg38.chr20_KI270870v1_alt 9411 5 + 183433 GAGGA s panTro5.chr20 66310966 5 + 66533130 GAGGA i panTro5.chr20 C 0 I 31146 s panPan2.chr20 62021704 5 + 62195757 AGGGA i panPan2.chr20 I 3 C 0 s gorGor5.CYUI01015848v1 411121 5 - 578057 GAGGA i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180396 0 - 397369 C e manLeu1.NW_012101369v1 130810 2 + 156971 I e saiBol1.JH378156 16197452 0 + 16356641 C e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131741 0 + 159171411 C e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937053 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327503 0 + 96509753 C a score=13690.000000 s hg38.chr20_KI270870v1_alt 9416 29 + 183433 CCGT-CG-GCCACAGCAGGGGGGTAC-AGGGG s panTro5.chr20 66342117 30 + 66533130 CCGT-CGAGCCACAGCAGGGGGGTAC-AGGCG i panTro5.chr20 I 31146 C 0 s panPan2.chr20 62021709 32 + 62195757 CCGTACGGGCCACACGCGAGGGGTACGAGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411126 29 - 578057 CCGT-CG-GCCACAGCAGGGGGGTAC-AGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937053 14 - 110113093 -----------------GGGGGGTAC-AGGGG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96327503 15 + 96509753 ----------------TGGGGGGTAC-AGAGG i macFas5.chr10 C 0 C 0 s calJac3.chr5 58131741 13 + 159171411 ------------------GGGGGTAC-AAGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197452 15 + 16356641 ----------------GAGGGGGTAC-AAAGG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180396 0 - 397369 C e manLeu1.NW_012101369v1 130810 2 + 156971 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I a score=3279.000000 s hg38.chr20_KI270870v1_alt 9445 2 + 183433 AG s panTro5.chr20 66342147 2 + 66533130 AG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021741 2 + 62195757 AG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411155 2 - 578057 AG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937067 2 - 110113093 GG i nomLeu3.chr13 C 0 C 0 s calJac3.chr5 58131754 2 + 159171411 AG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197467 2 + 16356641 AG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180396 0 - 397369 C e manLeu1.NW_012101369v1 130810 2 + 156971 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327518 0 + 96509753 C a score=3666.000000 s hg38.chr20_KI270870v1_alt 9447 12 + 183433 CAC----AGGCCATGG s panTro5.chr20 66342149 12 + 66533130 CAC----AGGCCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021743 14 + 62195757 NGAC--GAGGCCATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411157 12 - 578057 CAC----AGGCCATGG i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chr5 58131756 13 + 159171411 ---CACAAGGCTGTGG i calJac3.chr5 C 0 I 3 s saiBol1.JH378156 16197469 13 + 16356641 ---CACAAGGGCGTGG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180396 0 - 397369 C e manLeu1.NW_012101369v1 130810 2 + 156971 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937069 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327518 0 + 96509753 C a score=1248.000000 s hg38.chr20_KI270870v1_alt 9459 12 + 183433 AGAGGAC-CGTCA s panTro5.chr20 66342161 13 + 66533130 AGAGGACTCGTCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021757 12 + 62195757 CGAGGAC-CGTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411169 12 - 578057 AGAGGAC-CGTCG i gorGor5.CYUI01015848v1 C 0 C 0 s saiBol1.JH378156 16197482 12 + 16356641 CGGGGAC-GGCCA i saiBol1.JH378156 C 0 I 1 s dasNov3.JH569290 180396 1 - 397369 ---------G--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e manLeu1.NW_012101369v1 130810 2 + 156971 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937069 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327518 0 + 96509753 C a score=36531.000000 s hg38.chr20_KI270870v1_alt 9471 100 + 183433 GACACAGCAGGGGGGCACAGGGGAGCACAGGCCATGGTGAGGACTGTCGGCCACAGCAGGG---------GAGCACAGGCCATGGAGAGGACCGTCGGCCACAGCAGGG s panTro5.chr20 66342174 87 + 66533130 GAC------------CAGAGGGGAG-ACAGGCCATGGAGAGGACCGTCGGACACAGCAGGG---------GAGCACAGGCCATGGAGAGGACTGTCGGACACAGCAGGG i panTro5.chr20 C 0 T 238 s panPan2.chr20 62021769 100 + 62195757 GCCACAGCAGGGGG-TACAGGGGAGCACAGGCCATGGAGAGGACCGTCGGACACAGCAGGG--------CGGGTACAGGCCATGGAGAGGACCGTCGGCCACAGCAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411181 109 - 578057 GCCACAGCAGGGGACTACAGGGGAGCACAGGCCATGGAGAGGACCGTCGGCCACAGCAGGGGGTACAGGGGAGCACAGGCCATGGAGAGGACCGTCGGCCACAGCAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s dasNov3.JH569290 180397 34 - 397369 GACAC--------------GAGGGGCACAGGC-------------------CACAGCAGGA---------GGGCAC--------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e manLeu1.NW_012101369v1 130810 2 + 156971 I e saiBol1.JH378156 16197494 1 + 16356641 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937069 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327518 0 + 96509753 C a score=300.000000 s hg38.chr20_KI270870v1_alt 9571 1 + 183433 G s panPan2.chr20 62021869 1 + 62195757 G i panPan2.chr20 C 0 T 122 s gorGor5.CYUI01015848v1 411290 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180431 0 - 397369 C e manLeu1.NW_012101369v1 130810 2 + 156971 I e saiBol1.JH378156 16197494 1 + 16356641 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e panTro5.chr20 66342261 238 + 66533130 T e nomLeu3.chr13 109937069 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327518 0 + 96509753 C a score=3257.000000 s hg38.chr20_KI270870v1_alt 9572 38 + 183433 AGTATAGGGGAGCACAGGCCATGGAGAGGACCGTCAGA s gorGor5.CYUI01015848v1 411291 38 - 578057 ACTACAGGGGAGCACAGGCCATGGAGAGGACCATTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s dasNov3.JH569290 180431 18 - 397369 ------GAGGGGCTCAGGCCACGG-------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e panPan2.chr20 62021870 122 + 62195757 T e manLeu1.NW_012101369v1 130810 2 + 156971 I e saiBol1.JH378156 16197494 1 + 16356641 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e panTro5.chr20 66342261 238 + 66533130 T e nomLeu3.chr13 109937069 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327518 0 + 96509753 C a score=19668.000000 s hg38.chr20_KI270870v1_alt 9610 173 + 183433 CACAGCAGGG-GGGTACAGGGGAGCACAGGCCATGGAGAGGACC-GTCGGCCACAGC-AGGGGAGTATAGGG--GAGCACAGGCCATG----------GTGAGGACTGTCG-GCCACAGCAGGGGGGCACAGGGGAGCACAGGCCATGGTGAGGACT-GTCGGCCACAGCAGGGGGGTACAGGGGAGCAC s panTro5.chr20 66342023 166 + 66533130 CACAGCAGGGTGGATACAGAGGAGCACAGGC-ATG-AGAGGACCTGTCGGCCACAGCTAGGGGGGCACAGGGCCGAGCACAGGCCATGA---------GCGATGACCGTCGAGCCACAGCAGGGGGGTACAGGCGAGCACAGGCCATGGAGAGGACTCGTCGG----ACCAG--------AGGGGAG-AC i panTro5.chr20 T 238 C 0 s gorGor5.CYUI01015848v1 411329 143 - 578057 CACAGCAGGG-----------GAGCACAGGCCATGGAGAGGACT-GTCGGACACAGC-----------AGGG--GGGTACAGGCCATG----------GAGAGGACCGTCG-GCCACAGCAGGGGACTACAGGGGAGCACAGGCCATGGAGAGGACC-GTTGGACACAGC----------AGGGGAGCAC i gorGor5.CYUI01015848v1 C 0 C 0 s dasNov3.JH569290 180449 101 - 397369 --CAGGAGGG---------------------CACGAAGGGCACA----GGCCACAGC-AGGAGGGCA-TGAG--GGGCTCAGGCCATGGCAGAAGGGCACGAGGGGCACAG-GCCACAGCAGGAGGCCACAGG--------------------------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e panPan2.chr20 62021870 122 + 62195757 T e manLeu1.NW_012101369v1 130810 2 + 156971 I e saiBol1.JH378156 16197494 1 + 16356641 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937069 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327518 0 + 96509753 C a score=42703.000000 s hg38.chr20_KI270870v1_alt 9783 100 + 183433 AGGCCATGGAGAGGACCGTCGGACACAGCAGGGGGGC-ACAGGGGAGCACAGGCCATGGAGAGGACTGTCGGACACAGCAGGGCGGGTACAGGCCATGGCA s panTro5.chr20 66342189 90 + 66533130 AGGCCATGGAGAGGACCGTCGGACACAGCAGGGG-----------AGCACAGGCCATGGAGAGGACTGTCGGACACAGCAGGGCGGGTACAGGCCATGGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021748 99 + 62195757 AGGCCATGGCGAGGACCGTCGGCCACAGCAGGGG-GT-ACAGGGGAGCACAGGCCATGGAGAGGACCGTCGGACACAGCAGGGCGGGTACAGGCCATGGAG i panPan2.chr20 T 122 C 0 s gorGor5.CYUI01015848v1 411472 98 - 578057 AGGCCATGGAGAGGACTGTCGG--ACAGCAGGGGGGCTACAGGGGAGCACAGGCCATGGAGAGGACCGTCGGACACAGCAGGG-GGGTACAGGCCATGGCG i gorGor5.CYUI01015848v1 C 0 C 0 s dasNov3.JH569290 180550 34 - 397369 ----------------------CCACAGCAGGAG-------------------------------------GACAC--------GGGCACAGGCCATGGCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e colAng1.NW_012114444v1 5480710 0 - 5823884 C e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e manLeu1.NW_012101369v1 130810 2 + 156971 I e saiBol1.JH378156 16197494 1 + 16356641 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937069 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327518 0 + 96509753 C a score=14986.000000 s hg38.chr20_KI270870v1_alt 9883 19 + 183433 AGGACCGTCGGCCACAGCA s panTro5.chr20 66342279 19 + 66533130 AGGACCGTCGGCCACAGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021847 19 + 62195757 AGGACCGTCGGCCACAGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411570 19 - 578057 AGGACCGTCGGCCACAGCA i gorGor5.CYUI01015848v1 C 0 C 0 s colAng1.NW_012114444v1 5480710 19 - 5823884 AGGACCATCGGCCACAGCA i colAng1.NW_012114444v1 C 0 I 2 s dasNov3.JH569290 180584 4 - 397369 GGGA--------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e cerAty1.NW_012001373v1 3606102 2 - 3785965 I e chlSab2.chr2 90228667 2 - 90373283 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e manLeu1.NW_012101369v1 130810 2 + 156971 I e saiBol1.JH378156 16197494 1 + 16356641 I e macNem1.NW_012014244v1 16798729 2 - 16982598 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937069 0 - 110113093 C e rheMac8.chr10 92664982 2 - 92844088 I e otoGar3.GL873542 22763689 1 + 22939663 I e macFas5.chr10 96327518 0 + 96509753 C a score=48180.000000 s hg38.chr20_KI270870v1_alt 9902 13 + 183433 GGGGGAACACAGC s panTro5.chr20 66342298 13 + 66533130 GGGGGAACACAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021866 13 + 62195757 GGGGGAACACAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411589 13 - 578057 GGGGGAACACAGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92664984 13 - 92844088 GGGGGTACAGAGG i rheMac8.chr10 I 2 C 0 s macNem1.NW_012014244v1 16798731 13 - 16982598 GGGGGTACAGAGG i macNem1.NW_012014244v1 I 2 C 0 s cerAty1.NW_012001373v1 3606104 13 - 3785965 GGGGGTACAGAGG i cerAty1.NW_012001373v1 I 2 C 0 s chlSab2.chr2 90228669 13 - 90373283 GGGGGTACAGAGG i chlSab2.chr2 I 2 C 0 s manLeu1.NW_012101369v1 130812 13 + 156971 GGGGGTACAGAGG i manLeu1.NW_012101369v1 I 2 C 0 s colAng1.NW_012114444v1 5480731 13 - 5823884 GGGAGTACAGAGG i colAng1.NW_012114444v1 I 2 C 0 s otoGar3.GL873542 22763690 13 + 22939663 GGGGGCACAAAGG i otoGar3.GL873542 I 1 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180588 0 - 397369 C e saiBol1.JH378156 16197494 1 + 16356641 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937069 0 - 110113093 C e macFas5.chr10 96327518 0 + 96509753 C a score=11275.000000 s hg38.chr20_KI270870v1_alt 9915 2 + 183433 AG s panTro5.chr20 66342311 2 + 66533130 AG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021879 2 + 62195757 AG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411602 2 - 578057 AG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92664997 2 - 92844088 AG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327518 2 + 96509753 AG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798744 2 - 16982598 AG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606117 2 - 3785965 AG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228682 2 - 90373283 AG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130825 2 + 156971 AG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480744 2 - 5823884 AG i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22763703 1 + 22939663 -G i otoGar3.GL873542 C 0 I 1 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e canFam3.chr24 47539924 1 + 47698779 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180588 0 - 397369 C e saiBol1.JH378156 16197494 1 + 16356641 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I e nomLeu3.chr13 109937069 0 - 110113093 C a score=157087.000000 s hg38.chr20_KI270870v1_alt 9917 26 + 183433 CACAGGCCATGGCACATGG-GCACGGC s panTro5.chr20 66342313 26 + 66533130 CACAGGCCATGGCACATGG-GCACGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021881 26 + 62195757 CACAGGCCATGGCACATGG-GCACGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411604 26 - 578057 CACAGGCCATGGCACATGG-GCACGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937069 26 - 110113093 CACAGGCCATAGCACGTGG-GCACGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92664999 26 - 92844088 CACAGGCCATGGCATGCGG-GCACGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327520 26 + 96509753 CACAGGCCATGGCATGCGG-GCACGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798746 26 - 16982598 CACAGGCCATGGCATGCGG-GCACGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606119 26 - 3785965 CACAGGCCGTGGCATGCGG-GCACGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228684 26 - 90373283 CACAGGCCATGGCATGCGG-GCACAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130827 26 + 156971 CACAGGCCATGGCATGCGG-GCACGGC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480746 26 - 5823884 CACAGGCCATGGCATGCGG-GCACGGC i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22763705 24 + 22939663 CACAGACCATAGACTGGGC-ACACA-- i otoGar3.GL873542 I 1 I 1 s canFam3.chr24 47539925 27 + 47698779 CACCAGCTGTGACACGGGGCACACGGC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 180588 5 - 397369 -----------------GG-GCA---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e saiBol1.JH378156 16197494 1 + 16356641 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131769 3 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I a score=74069.000000 s hg38.chr20_KI270870v1_alt 9943 12 + 183433 GGGGCTG----GGCCT s panTro5.chr20 66342339 12 + 66533130 GGGGCTG----GGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021907 12 + 62195757 GGGGCTG----GGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411630 12 - 578057 GGGGCTG----GGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937095 12 - 110113093 GGGGATG----GGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665025 12 - 92844088 GGGGATG----GGCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327546 12 + 96509753 GGGGATG----GGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798772 12 - 16982598 GGGGATG----GGCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606145 12 - 3785965 AGGGATG----GGCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228710 12 - 90373283 GGGGATG----GGCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130853 12 + 156971 GGGGATG----GGCCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480772 12 - 5823884 GGGGACG----GGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58131772 11 + 159171411 GGGGATG----GCCA- i calJac3.chr5 I 3 I 1 s otoGar3.GL873542 22763730 16 + 22939663 GAGGATGGATTGGCCT i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47539952 5 + 47698779 -----------CGCCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180593 0 - 397369 C e saiBol1.JH378156 16197494 1 + 16356641 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I a score=7397.000000 s hg38.chr20_KI270870v1_alt 9955 1 + 183433 C s panTro5.chr20 66342351 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021919 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411642 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937107 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665037 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327558 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16798784 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606157 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228722 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 130865 1 + 156971 C i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5480784 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22763746 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47539957 1 + 47698779 C i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180593 0 - 397369 C e saiBol1.JH378156 16197494 1 + 16356641 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e calJac3.chr5 58131783 1 + 159171411 I e aotNan1.NW_018500483v1 2596741 60 + 11732439 I a score=594081.000000 s hg38.chr20_KI270870v1_alt 9956 69 + 183433 CTGCTGGAACTCCACTTGGGCTTCAGGCCACGAGAGTGGATTTCTGGGTCTCATG--------------------CGGTGCAGGTGTCC s panTro5.chr20 66342352 89 + 66533130 CTGCTGGAACTCCACTTGGGCTTCAGGCCACGAGAGTGGATTTCTTGGTCTCATGTGGTGCAGGTGTCCTTCATTTGGTGCAGGTGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62021920 89 + 62195757 CTGCTGGAACTCCACTTGGGCTTCAGGCCACGAGAGTGGATTTCTTGGTCTCATGTGGTGCAGGTGTCCTTCATTTGGTGCAGGTGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411643 69 - 578057 CTGCTGGAACTCCACTTGGGCTTCAGGCCACGAGAGTGGATTTCTTGGTCTCATG--------------------TGGTACAGGTGTCC i gorGor5.CYUI01015848v1 C 0 I 183 s nomLeu3.chr13 109937108 69 - 110113093 CTGCTGGAATGCCACTTGGGCTTCAGGCCGTGAGAGTGGATTTCTTGGTCTCATT--------------------TGGTGCAGGTGTCC i nomLeu3.chr13 C 0 I 3 s rheMac8.chr10 92665038 69 - 92844088 CTGCTGGAATGTCACTGGGGTTTCAGGCCATGAGAGTGGACTCCATGGTCTCATT--------------------TGGTGCAGGTGTCC i rheMac8.chr10 C 0 I 3 s macFas5.chr10 96327559 69 + 96509753 CTGCTGGAATGTCACTGGGGTTTCAGGCCATGAGAGTGGACTCCATGGTCTCATT--------------------TGGTGCAGGTGTCC i macFas5.chr10 C 0 I 3 s macNem1.NW_012014244v1 16798785 69 - 16982598 CTGCTGGAATGTCACTGGGGTTTCAGGCCATGAGAGTGGACTCCATGGTCTCATT--------------------TGGTGCAGGTGTCC i macNem1.NW_012014244v1 C 0 I 3 s cerAty1.NW_012001373v1 3606158 69 - 3785965 CTGCTGGAATGTCACTGGGGTTTCAGGCCATGAGAGTGGACTCCATGGTCTCATT--------------------CGGTGCAGGTGTCC i cerAty1.NW_012001373v1 C 0 I 3 s chlSab2.chr2 90228723 69 - 90373283 CTGCTGGAATGTCACTGGGGTTTCAGGCCATGAGAGTGGATTCCATGGTCTCATT--------------------CGGTGCAGGTGTCC i chlSab2.chr2 C 0 I 3 s manLeu1.NW_012101369v1 130866 69 + 156971 CTGCTGGAATGTCACTGGGGTTTCAGGCCATGAGAGTGGACTCCATGGTCTCATT--------------------CGGTGCAGGTGTCC i manLeu1.NW_012101369v1 C 0 I 3 s colAng1.NW_012114444v1 5480785 69 - 5823884 CTGCTGGAATGTCACTGGGGTTTCAGCCCATGAGAGTGGATTCCATGGTCTCATT--------------------TGGTGCAGGTGTCC i colAng1.NW_012114444v1 C 0 I 3 s calJac3.chr5 58131784 69 + 159171411 CTGCTGGAACGTCACTTGGGTTTCAGGCCATGACAGTGGATTTCGTGGTCTCATT--------------------TGCTGCAGATGTGG i calJac3.chr5 I 1 I 3 s saiBol1.JH378156 16197495 69 + 16356641 CTGCTGGAACATCACTTGGGTTTCAGGCCGTGACAGTGGATTTCGTGGTCTCAGT--------------------TGCTGCAGGTGTTG i saiBol1.JH378156 I 1 I 3 s aotNan1.NW_018500483v1 2596801 68 + 11732439 CTGCTGGAACGTCACTTGGGTTTCAGGCCGTGACAGTGGGTTTC-TGGTCTCATT--------------------TGCTGCAGGTGTGG i aotNan1.NW_018500483v1 I 60 I 3 s otoGar3.GL873542 22763747 69 + 22939663 GTGGGAAAATGTTGCTTTGGCTTCAGGCCATGAGAGTGAAGTGCATGATCTCATT--------------------GGATGTGCGCACCC i otoGar3.GL873542 C 0 I 3 s canFam3.chr24 47539958 69 + 47698779 CTGGTGAAACGCCATCCGGGTTCCAAGTGACGGGAGCCCATTCTGTGGCCGTGCT--------------------TGAGGACTGAGTCT i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 180593 45 - 397369 ----------------TGCGTTTCAAGCCATGAGGGTACATTTTGTGGCCTAGTT--------------------GGATGC-------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I a score=429735.000000 s hg38.chr20_KI270870v1_alt 10025 46 + 183433 GCCTTTGCAGCAACACAGCATCGCTGCTGCCTGAG-GTGCCCGCACT s panTro5.chr20 66342441 46 + 66533130 GCCTTTGCAGCAACACAGCATCGCTGCTGCCTGAG-GTGCCCGCACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022009 46 + 62195757 GCCTTTGCAGCAACACAGCATCGCTGCTGCCTGAG-GTGCCCGCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 411895 46 - 578057 GCCTTTGCAGCAACACAGCATCGCTGCTGCCTGAG-GTGCCCGCACT i gorGor5.CYUI01015848v1 I 183 C 0 s nomLeu3.chr13 109937180 46 - 110113093 GCCTTTGCAGCAACACAGCATCGCTGCTGCTTGAG-GTGCCCGCACT i nomLeu3.chr13 I 3 C 0 s rheMac8.chr10 92665110 46 - 92844088 GCCTTTGCAGCCACACAGCATTGCTGCTGTCTGAG-GCGCCCGCACT i rheMac8.chr10 I 3 C 0 s macFas5.chr10 96327631 46 + 96509753 GCCTTTGCAGCCACACAGCATTGCTGCTGTCTGAG-GCGCCCGCACT i macFas5.chr10 I 3 C 0 s macNem1.NW_012014244v1 16798857 46 - 16982598 GCCTTTGCAGCCACACAGCATTGCTGCTGTCTGAG-GCGCCCGCACT i macNem1.NW_012014244v1 I 3 C 0 s cerAty1.NW_012001373v1 3606230 46 - 3785965 GCCTTTGCAGCCACACAGCATTGCTGCTGTCTGAG-GCGCCCGCACT i cerAty1.NW_012001373v1 I 3 C 0 s chlSab2.chr2 90228795 46 - 90373283 GCCTTTGCAGCCACACAGCATTGCTGCTGTCTGAG-GCGCCCGCACT i chlSab2.chr2 I 3 C 0 s manLeu1.NW_012101369v1 130938 46 + 156971 GCCTTTGCAGCCACACAGCATTGCTGCTGTCTGAG-GCGCCCGCACT i manLeu1.NW_012101369v1 I 3 C 0 s colAng1.NW_012114444v1 5480857 46 - 5823884 GCCTTTGCAGCCACACAGCACTGCTGCTGTCTGAG-GCGCCCGCACT i colAng1.NW_012114444v1 I 3 C 0 s calJac3.chr5 58131856 43 + 159171411 GCCTTTGCAGCAGCACAGCA---CTGCTGCCTGAG-GTGCCCACACT i calJac3.chr5 I 3 I 1 s saiBol1.JH378156 16197567 43 + 16356641 GCCTTTGCAGCAGCACAGCA---CTGCTGCCTGAG-GTGCCCACACT i saiBol1.JH378156 I 3 I 1 s aotNan1.NW_018500483v1 2596872 43 + 11732439 GCCTTTGCAGCAGCACAGCA---CTGCTGCCTGAG-GCGCCCACACT i aotNan1.NW_018500483v1 I 3 I 61 s otoGar3.GL873542 22763819 45 + 22939663 GTGTTTACAACGACAC-TTGGCGTTGCTGCCTGCT-GTGCCTATACT i otoGar3.GL873542 I 3 I 2 s canFam3.chr24 47540030 45 + 47698779 GCTTTTGCGGGGACAC-TTGGCTCTCCGGCCCCAG-GTGTTCACATT i canFam3.chr24 I 3 I 2 s dasNov3.JH569290 180638 45 - 397369 GCCTCTGCAGTGACATA-TATCTTTGCTGCCCCAACTTGCCTAGTC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I a score=273931.000000 s hg38.chr20_KI270870v1_alt 10071 41 + 183433 TACCACCCCCCGGCCCCATCTTGGGGAGA-------------------GACTATGTAACG s panTro5.chr20 66342487 41 + 66533130 TACCACCTCCCAACCCCATCTTGGGGAGA-------------------GACTATGTAACA i panTro5.chr20 C 0 I 6 s panPan2.chr20 62022055 41 + 62195757 TACCACCTCCCAACCCCATCTTGCGGAGA-------------------GACTATGTAACA i panPan2.chr20 C 0 I 6 s gorGor5.CYUI01015848v1 411941 41 - 578057 TACCACCTCCCAGCCCCATCCTGGGGAGA-------------------GACTATGTAACA i gorGor5.CYUI01015848v1 C 0 I 6 s nomLeu3.chr13 109937226 39 - 110113093 TACCACCTCCCAGCCCCGTCTTGGGGAGA-------------------GAC--TGCAGCA i nomLeu3.chr13 C 0 I 6 s rheMac8.chr10 92665156 41 - 92844088 TGCCACTTCCCAACCCTGTCTTGGGGAGA-------------------GACTGTGCAACG i rheMac8.chr10 C 0 I 6 s macFas5.chr10 96327677 41 + 96509753 TGCCACTTCCCAACCCTGTCTTGGGGAGA-------------------GACTGTGCAACG i macFas5.chr10 C 0 I 6 s macNem1.NW_012014244v1 16798903 41 - 16982598 TGCCACTTCCCAACCCTGTCTTGGGGAGA-------------------GACTGTGCAACG i macNem1.NW_012014244v1 C 0 I 6 s cerAty1.NW_012001373v1 3606276 41 - 3785965 TGCCACTTCCCAACCCTGTCTTGGGGAGA-------------------GACTGTGCAACG i cerAty1.NW_012001373v1 C 0 I 6 s chlSab2.chr2 90228841 41 - 90373283 TGCCACTTCCCAACCCTGTCTTGGGGAGA-------------------GACTGTGCAACG i chlSab2.chr2 C 0 I 6 s manLeu1.NW_012101369v1 130984 41 + 156971 TGCCACTTCCCAACCCTGTCTTGGGGAGA-------------------GACTGTGCAATG i manLeu1.NW_012101369v1 C 0 I 6 s colAng1.NW_012114444v1 5480903 41 - 5823884 TGCCACTTCCCAACCCTGTCTTGGGGAGA-------------------GACTGTGCGACA i colAng1.NW_012114444v1 C 0 I 6 s calJac3.chr5 58131900 54 + 159171411 TGCCACCTCCCAGCCCTGTCTTGGGAAGAGCCCAA---GAATCC---TGACTATGCCACA i calJac3.chr5 I 1 I 6 s saiBol1.JH378156 16197611 55 + 16356641 TGCCACCTCCCAGCCCTGTCTTGGGAGGAGCCCAAG--GGATCC---TGACTGTTCCACG i saiBol1.JH378156 I 1 I 6 s otoGar3.GL873542 22763866 55 + 22939663 TGTCACTTCCCAATCATGTCTTGGGAGGAGCCCAAC--AAGTCC---TGACTGTGGAACA i otoGar3.GL873542 I 2 I 6 s canFam3.chr24 47540077 60 + 47698779 CATCACCTGCTCCTCGTGTCTTGGGGGGATCCAGCCCAGGGTCCCGGCGGGAATGCAGTG i canFam3.chr24 I 2 I 2 s dasNov3.JH569290 180683 36 - 397369 TGTCACCTTCCAATCCTGCCCCGGGGGGA-------------------GCCGGGG----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1058596 238 + 1231380 I e aotNan1.NW_018500483v1 2596915 61 + 11732439 I a score=982541.000000 s hg38.chr20_KI270870v1_alt 10112 101 + 183433 TGGCCC-AGGTCAAGATCACAGTTCAGGTTCCCTCCCCTCCCGACCACTGTCATTAGGGATCCTGAGTCCCAGAGCCTTCCAAGGGGCTTGTCCATCTGTCT----- s panTro5.chr20 66342534 101 + 66533130 TGGCCC-AGGTCAAGATCACAGTTCAGGTTCCCTCCCCTCCCGACCACTGTCATTAGGGATCCTGAGTCCCAGAGCCTTCCAAGGGGCTTGTCCATCTGTCT----- i panTro5.chr20 I 6 I 194 s panPan2.chr20 62022102 101 + 62195757 TGGCCC-AGGTCAAGATCACAGTTCAGGTTCCCTCCCCTCCCGATCACTGTCATTAGGGATCCTGAGTCCCAGAGCCTTCCAAGGGGCTTGTCCATCTGTCC----- i panPan2.chr20 I 6 C 0 s gorGor5.CYUI01015848v1 411988 101 - 578057 TGGCCC-AGGTCAGGATGACAGTTCAGGTTCCCTCCCCTCCCGACCACTGTCATTAGGGATCCTGAGTCCCAGAGCCTTCCAAGGGGCTTGTCCATCTGTCT----- i gorGor5.CYUI01015848v1 I 6 C 0 s nomLeu3.chr13 109937271 101 - 110113093 TGGCCC-AGGTCGAGATCACAGTTCAGGTTCCTTCCCCTCCCGACCACTGTCATGAGGGACCCAGAGTCCCAGAGCCTTCCAAGGGGCTTGTCCATCTGTCT----- i nomLeu3.chr13 I 6 C 0 s rheMac8.chr10 92665203 100 - 92844088 TGGCCC-AGGTCAAGACCATAGTTCGGG-TCCCTTCCCTCCCGATCACTGTCATTAGGGATCCTGAGGCCCAGAGCCTTCCGAGGGGCTTGTCCATCTGTCT----- i rheMac8.chr10 I 6 C 0 s macFas5.chr10 96327724 100 + 96509753 TGGCCC-AGGTCAAGACCATAGTTCAGG-TCCCTTCCCTCCCGATCACTGTCATTAGGGATCCTGAGGCCCAGAGCCTTCCGAGGGGCTTGTCCATCTGTCT----- i macFas5.chr10 I 6 C 0 s macNem1.NW_012014244v1 16798950 100 - 16982598 TGGCCC-AGGTCAAGACCATAGTTCAGG-TCCCTTCCCTCCTGATCACTGTCATTAGGGATCCTGAGGCCCAGAGCCTTCCGAGGGGCTTGTCCATCTGTCT----- i macNem1.NW_012014244v1 I 6 C 0 s cerAty1.NW_012001373v1 3606323 100 - 3785965 TGGCCC-AGGTCAAGACCATAGTTCAGG-TCCCTTCCCTCCCGACCACTGTCATTAGGGATCCTGAGGCCCAGAGCCTTCCGAGGGGCTTGTCCATCTGTCT----- i cerAty1.NW_012001373v1 I 6 C 0 s chlSab2.chr2 90228888 100 - 90373283 TGGCCC-AGGTCAAGACCATAGTTCAGG-TCCCTTCCCTCCCGACCACTGTCATTAGGGATCCTGAGGCCCAGAGCCTTCCGAGGGGCTTGTCCATCTGTCT----- i chlSab2.chr2 I 6 C 0 s manLeu1.NW_012101369v1 131031 100 + 156971 CGGCCC-AGGTCAAGACCATAGTTCAGG-TCCCTTCCCTCCCGACCACTGTCATTAGGGATCCTGAGGCCCAGAGCCTTCCGAGGGGCTTGTCCATCTGTCT----- i manLeu1.NW_012101369v1 I 6 C 0 s colAng1.NW_012114444v1 5480950 100 - 5823884 TGGCCC-AGGTCGACACCATAGTTCAGG-TCCCTTCCCTCCCGACCACTGTCATTAGGGATCCTGAGTCCCAGAGCCTTCCGAGGCGCTTGTCCATCTGTCT----- i colAng1.NW_012114444v1 I 6 C 0 s calJac3.chr5 58131960 99 + 159171411 TGGCCC-GGGTTGAGATCACGGTTCGGGTTCCTTCCCCTCCCAACCACTGTCATTAGGGAACCCCAGCCCCAGAACCTTCTA--GGGCTTGTCCATCTGTCT----- i calJac3.chr5 I 6 C 0 s saiBol1.JH378156 16197672 99 + 16356641 TGGCCC-AAGTCGAGATCACGGTTTGGGTTCCTTCCCCTCCCAACCATTGTCATTAGGGAACCCCAGCCCCAGAACCTTCCG--GGGCTTGTCCATCTGTCT----- i saiBol1.JH378156 I 6 C 0 s cebCap1.NW_016107870v1 1058834 99 + 1231380 TGGCCC-AGGTCGAGATCATGGTTTGGGTTCCTTCCCCTTCCAACCACTGTCATTAGGGAACCCCAGCCCCAGAACCTTCCA--GGGCTTGTCCATCTGTCT----- i cebCap1.NW_016107870v1 I 238 C 0 s aotNan1.NW_018500483v1 2596976 99 + 11732439 TGGCCC-GGGTCGAGATCACGGTTCGGGATCCTTCCCCTCCCAACCACTGTCATTAGGGAACCCCAGCCCCAGAACCTTCCA--GAGCTTGTCCATCTGTCT----- i aotNan1.NW_018500483v1 I 61 C 0 s otoGar3.GL873542 22763927 80 + 22939663 TGGCCCAAGGACAAGGTCACAGTTCAGGTTCTTTCCCCCCGAGACCTCTGT------------------TCA----CTGCCTGGGGGCCTGTCTATCTGTCT----- i otoGar3.GL873542 I 6 C 0 s canFam3.chr24 47540139 99 + 47698779 GGCCCC-AGGATGAGGTCGCGGTTTGGGTTTCTCTCCCTCCGGACTACGGTTGGCAGGGAGGAT--GGCCAAGGGACATCCAGGGAGGTCGTGAGTCGGGAT----- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 180719 75 - 397369 GGTCCC-AAATGTGGAGTGTGG----------------------CCTCCGAGGTCAGGGCTCCTGGGTCC---------TCAGAGAGGACGTCTGTCTGCACAGTTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I a score=126745.000000 s hg38.chr20_KI270870v1_alt 10213 15 + 183433 --GTCTCTCGTGGGTAA- s panPan2.chr20 62022203 15 + 62195757 --GTCTCTTGTGGGTAA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412089 15 - 578057 --GTCTCTTGTGGGTAA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937372 15 - 110113093 --GTCTCTCGTGGGTAA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665303 15 - 92844088 --GTCTCTCGTGGGTAA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327824 15 + 96509753 --GTCTCTCGTGGGTAA- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799050 15 - 16982598 --GTCTCTCGTGGGTAA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606423 15 - 3785965 --GTCTCTCGTGGGTAA- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90228988 15 - 90373283 --GTCTCTCGTGGGTAA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131131 15 + 156971 --GTCTCTCGTGGGTAA- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481050 15 - 5823884 --GTCTCTCGTGGGTAA- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132059 15 + 159171411 --GTCCCTTGTGGGTAA- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197771 15 + 16356641 --GTCCCTTGTGGGTAA- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1058933 15 + 1231380 --GTCCCTTGTGGGTAA- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2597075 15 + 11732439 --GTCCCTCGTGGGTAA- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22764007 12 + 22939663 -----CCCTGTGGGCGG- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47540238 14 + 47698779 --GTCTATGGTGCCAA-- i canFam3.chr24 C 0 I 10 s dasNov3.JH569290 180794 13 - 397369 GTGCCTCT-----GCAAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783395 409 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e panTro5.chr20 66342635 194 + 66533130 I a score=924886.000000 s hg38.chr20_KI270870v1_alt 10228 94 + 183433 GTGGGCCCGGGATGCTTGCTGTGTG--GGGGCC-TCTGCCAGGACCTGGATCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGCAGAGACATGG s panPan2.chr20 62022218 94 + 62195757 GTGGGCCTGGGATGCTTGCTGTGTG--GGGGCC-TCTGCCAGGACCTGGATCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGCAGAGACATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412104 94 - 578057 GTGGGCCCAGGATGCTTGCTGTGTG--GGGGCC-TCTGCCAGGACCTGGATCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGCAGAGACATGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937387 94 - 110113093 GTGGACCCAGGATGCTTGCTGTGTT--GGGGCC-TCTGCCAGGACCTGGATCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGCAGAGACATGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665318 95 - 92844088 GTGGACTCAGGATGCTTGCTGTGTT--GGGGCCTTCTGCCAGGACCTGGCTCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGCAGAGACATGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327839 95 + 96509753 GTGGACTCAGGATGCTTGCTGTGTT--GGGGCCTTCTGCCAGGACCTGGCTCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGCAGAGACATGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799065 95 - 16982598 GTGGACTCAGGATGCTTGCTGTGTT--GGGGCCTTCTGCCAGGACCTGGCTCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGCAGAGACATGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606438 95 - 3785965 GTGGACTCAGGATGCTTGCTGTGTT--GGGGCCTTCTGCCAGGACCTGGCTCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGCAGAGACATGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229003 95 - 90373283 GTGGACTCAGGATGCTTGCTGTGTT--GGGGCCTTCGGCCAGGACCTGGCTCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGATGCGGAGACATGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131146 95 + 156971 GTGGACTCAGGATGCTTGCTGTGTT--GGGGCCTTCTGCCAGGACCTGGCTCCCTGCTGCTGTCCACCCAGGGGCTGTCCGGGAAGCAGAGACGTGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481065 95 - 5823884 GTGGACTCAGGATGCTTGCTGTGTT--GGGGCCTTCTGCCAGGACCTGGCTCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGCAGAGACATGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132074 93 + 159171411 TTGGACTCAGGATGCTTGCTGTGCT--GGGGCCTTCTGCTCTGACCTGGATCCCTGCTGCTGTCCACGCAGGGGCTGTCCAGGAAGC--AGACGTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197786 93 + 16356641 TTGGACTCAGGAGGCTTGCTGTGCT--GGGGCCTTCTGCTCTGACCTGGATCCCTGTTGCTGTCCACCCAGGGGCGGTTCAGGAAGC--AGACGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1058948 80 + 1231380 TTGGACTAAGGATGCTTGC---------------TCTGCTCTGACCTGGATCCCTGCTGCTGTCCACCCAGGGGCTGTCCAGGAAGC--AGACGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2597090 95 + 11732439 TTGGACTCAGGACGCTTGCTGTGCCGGGGGGCCTTCTGCTCTGACCTGGATCCCTGCTGCTGTCCATGCAGGGGCTGTCCAGGAAGC--AGACGTGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1783804 95 - 2029793 GTGGGCCCAGGATGCCTGCTGTGTG--GGGACCTTCTGCCAGGACCCGGGTCCCCGCTGCTGCCTCCCCAGGGGCCGTCCAGGGCGCAGAGACGTGG i proCoq1.NW_012150197v1 I 409 I 109 s otoGar3.GL873542 22764019 80 + 22939663 GTAAATCCAGGATATCT------------GACCTTCTGCCAGGACCTGAATCCCTGCTGCAATCCACCCAGGGGCTTTCTGGGGAGTAGAGA----- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47540262 75 + 47698779 CTGGGTCTGAAGGGCAT----------GGGGAGGGGTGCCGGGACCCGCATCCCTGCAGCTCCTCACCCAGGGGCTG------------AGGCCTGG i canFam3.chr24 I 10 I 1 s dasNov3.JH569290 180807 60 - 397369 GCATGCACAGGATGTCTG-TGTGTCC-AGGACCTTCTGCCTGGGTT-----------------------------------GGACACGGGGAGATGG i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e panTro5.chr20 66342635 194 + 66533130 I a score=434494.000000 s hg38.chr20_KI270870v1_alt 10322 53 + 183433 GAGGTATATGCCCACGGCTGTC--TGTAGGTCTGGTGGCCAGCG-T--GTGAGGGTCT s panPan2.chr20 62022312 53 + 62195757 GAGGTATATGCCCACGGCTGTC--TGTAGGTCTGGTGGCCAGCG-T--GTGAGGGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412198 53 - 578057 GAGGTATATGCCCACGGCTGTC--TGTAGGTCTGGTGGCCAGCC-T--GTGAGGGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937481 51 - 110113093 AAGGTATATGCCCACGGCTGTT----TAGGTCTGGTGGCCAGCA-T--GTGAGCGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665413 55 - 92844088 AAGGTATATGCCCACAGCTGTCTCTGTAGGTCTGGTGGCCAGTG-T--TTGAGGGTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327934 55 + 96509753 AAGGTATATGCCCACAGCTGTCTCTGTAGGTCTGGTGGCCAGTG-T--TTGAGGGTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799160 55 - 16982598 ACGGTATATGCCCACAGCTGTCTCTGTAGGTCTGGTGGCCAGTG-T--TTGAGGGTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606533 55 - 3785965 AAGGTATATGCCCACAGCTGTCTCTGTAGGTCTGGTGGCCAGTG-T--TTGAGGGTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229098 55 - 90373283 AAGGTATATGCCCACAGCTGTCTCTGTACGTCTGGTGGCCAGTG-T--TTGAGGGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131241 55 + 156971 AAGGTATATGCCCACAGCTGTCTCTGTAGGTCTGGTGGCCAGTG-T--TTGAGGGTCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481160 55 - 5823884 AAGATATATGCCCACAGCTGTCTCTGTAGGTCTGGTGGCCAGTG-T--TTGAGGGTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132167 42 + 159171411 GAGG-------------CTGTCTCTGGAAGTCTGGTGGCCAGCA-T--TTGAGGGTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197879 56 + 16356641 GAGGTTTATCCCCATGACTGTCTCTGGAGGTCTGGTGGCCAGCATT--TTGAGGGTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1059028 55 + 1231380 GAGGTATATGTCCATGGCTGTCTCTGGAGGTTTGGTGGCCAGCA-T--TTGAGGGTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2597185 55 + 11732439 GCGGTATATGCCCACGGCTGTCTCTGGAGGTCTGGTGGCCAGCA-T--TTGAGGGTCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22764099 42 + 22939663 ------------CACAGCTGTCTC-ACGGGTCTGGTGGCCAGGC-T--TCAGAAGTCT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47540338 55 + 47698779 AAGGGACAGGCTCGTGGTCATCACTGCAGGTTCGGTGGCCAAGC-T--CCCTGGCCCT i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 180867 33 - 397369 ----------------GCTG--------GGCCCAGTGCCAGGCC-TTGTTGCGAGTCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e panTro5.chr20 66342635 194 + 66533130 I a score=489801.000000 s hg38.chr20_KI270870v1_alt 10375 44 + 183433 GTGTCTCCTTGCGTG--GAGAGGACAGCACTGGGA-TGTGAACAGGC s panTro5.chr20 66342829 47 + 66533130 GTGTCTCCCTGCGTGCAGAGAGGACAGCACTGGGAATGTGAACAGGC i panTro5.chr20 I 194 C 0 s panPan2.chr20 62022365 44 + 62195757 GTGTCTCCCTGCGTG--GAGAGGACAGCACTGGGA-TGTGAACAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412251 44 - 578057 GTGTCTCCCTGCGTG--GAGAGGACAGCACTGGGA-TGTGAACAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937532 44 - 110113093 GTGTCTCCCTGCGTG--GGGAGGACAGCACTGGGA-TGTGAACAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665468 44 - 92844088 GTGTCTCACTGTGTG--GAGAAGACAGCACTGGGA-TGTGAACAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96327989 44 + 96509753 GTGTCTCACTGTGTG--GAGAAGACAGCACTGGGA-TGTGAACAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799215 44 - 16982598 GTGTCTCACTGTGTG--GAGAAGACAGCACTGGGA-TGTGAACAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606588 44 - 3785965 GTGTCTCACTGTGTG--GAGAAGACAGCACTGGGA-TGTGAACAGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229153 44 - 90373283 GTGTCTCACTGTGTG--GAGAAGACAGCACTGGGA-TGTGAACAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131296 44 + 156971 GTGTCTCACTGTGTG--GAGAAGACAGCACTGGGA-TGTGAACAGGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481215 44 - 5823884 GTGTCTCACTGTGTG--GAGAAGACAGCACTGGGA-TGTGAACAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132209 44 + 159171411 ATGTCTCACTGTGTG--GAGAAGACAGCATGGGGA-TGTGAACAGGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197935 44 + 16356641 GTGTCTCGCTGTGTG--GAGAAGACAGCATGGGGA-TGTGAACAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1059083 44 + 1231380 GTGTCTCGCTGTGTG--GAGAAGACAGCATGGGGA-TGTAAACAGGC i cebCap1.NW_016107870v1 C 0 I 69 s aotNan1.NW_018500483v1 2597240 44 + 11732439 GTATCTCACTGTGTG--GAGAAGACAGCATGGGGA-TGTGAACAGGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22764141 44 + 22939663 TTGTCTCTCTGTATG--GAGAAGATAAAATTTGGT-TGTGAACAGGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47540393 42 + 47698779 TTCTCTC-CCGTGTG--GAGAACATAATGACGGGA-TGTGAGCAAG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 180900 35 - 397369 --GTCTTTCTAGGGA--GAAGGAGC-------GGG-TGTGAACGTGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I a score=83929.000000 s hg38.chr20_KI270870v1_alt 10419 14 + 183433 C-GGGCGTCCCCTGA s panTro5.chr20 66342876 15 + 66533130 CCGGGCGTCCCCTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022409 14 + 62195757 C-TGGTGTCCCCTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412295 14 - 578057 C-GGTCGTCCCCTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937576 14 - 110113093 C-GGGCGTCCCCTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665512 14 - 92844088 T-GGGCACCCCCTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328033 14 + 96509753 T-GGGCACCCCCTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799259 14 - 16982598 T-GGGCACCCCCTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606632 14 - 3785965 T-GGGCACCCCCTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229197 14 - 90373283 T-GGGCACCCGCTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131340 14 + 156971 T-GGGCACCCCCTGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481259 14 - 5823884 C-GGGCACCCCCTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132253 14 + 159171411 -AGAGTGTCCCCTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197979 14 + 16356641 -AGAGCGTCCCCTGG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2597284 14 + 11732439 -AGCACGTCCCCTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22764185 14 + 22939663 -AAGGTGTTCCCTAA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47540435 13 + 47698779 --GGATGTTCCTCCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 180935 14 - 397369 -AGGATGGTCCCTGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1059127 69 + 1231380 I a score=101941.000000 s hg38.chr20_KI270870v1_alt 10433 11 + 183433 AAGAGACAGCC s panTro5.chr20 66342891 11 + 66533130 AAGAGTCAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022423 11 + 62195757 AAGAGACAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412309 11 - 578057 AAGAGACAACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937590 11 - 110113093 AAGAGACAACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665526 11 - 92844088 AAGAGACAACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328047 11 + 96509753 AAGAGACAACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799273 11 - 16982598 AAGAGACAACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606646 11 - 3785965 AAGAGACAACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229211 11 - 90373283 AAGAGACAACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131354 11 + 156971 AAGAGACAACC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481273 11 - 5823884 AAGAGACAACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132267 11 + 159171411 AAGAGGCCACC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16197993 11 + 16356641 AAGAGGCCGCC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2597298 11 + 11732439 AAGAGGCCGCC i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47540448 11 + 47698779 GAGCGACAGCT i canFam3.chr24 C 0 I 29 s dasNov3.JH569290 180949 11 - 397369 AAGGGGCCACT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e otoGar3.GL873542 22764199 0 + 22939663 C a score=88303.000000 s hg38.chr20_KI270870v1_alt 10444 13 + 183433 -------GGAACTgggtggg s panTro5.chr20 66342902 13 + 66533130 -------GGAATTGGGTGGG i panTro5.chr20 C 0 I 824 s panPan2.chr20 62022434 13 + 62195757 -------GGAACTGGGTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412320 13 - 578057 -------GGAACTGggtggg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937601 13 - 110113093 -------CGAACTGGGTTGg i nomLeu3.chr13 C 0 I 2 s rheMac8.chr10 92665537 13 - 92844088 -------CGAACTGggtggt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328058 13 + 96509753 -------CGAACTGggtggt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799284 13 - 16982598 -------CGAACTGggtggt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606657 13 - 3785965 -------CGAACTGggtggt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229222 13 - 90373283 -------CGAACTGGGTGAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131365 13 + 156971 -------CGAACTGggtggt i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481284 13 - 5823884 -------TGAACTGGGTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132278 13 + 159171411 -------TGAACTGGATggg i calJac3.chr5 C 0 I 4 s saiBol1.JH378156 16198004 13 + 16356641 -------TGAACTGGGTggg i saiBol1.JH378156 C 0 I 4 s aotNan1.NW_018500483v1 2597309 13 + 11732439 -------TGAACTGGGTggg i aotNan1.NW_018500483v1 C 0 I 10 s dasNov3.JH569290 180960 13 - 397369 GCTCCCCCGGACA------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e otoGar3.GL873542 22764199 0 + 22939663 C a score=30472.000000 s hg38.chr20_KI270870v1_alt 10457 4 + 183433 ggtg s panPan2.chr20 62022447 4 + 62195757 ggtg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412333 4 - 578057 ggtg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937616 4 - 110113093 ggtg i nomLeu3.chr13 I 2 C 0 s rheMac8.chr10 92665550 4 - 92844088 ggtg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328071 4 + 96509753 ggtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799297 4 - 16982598 ggtg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606670 4 - 3785965 ggtg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229235 4 - 90373283 GGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131378 4 + 156971 ggtg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481297 4 - 5823884 AGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132295 4 + 159171411 ggta i calJac3.chr5 I 4 C 0 s saiBol1.JH378156 16198021 4 + 16356641 ggtg i saiBol1.JH378156 I 4 C 0 s dasNov3.JH569290 180973 4 - 397369 GATG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e otoGar3.GL873542 22764199 0 + 22939663 C a score=12914.000000 s hg38.chr20_KI270870v1_alt 10461 5 + 183433 ggcgt-- s panPan2.chr20 62022451 5 + 62195757 ggcat-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412337 5 - 578057 ggcat-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937620 5 - 110113093 ggggt-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665554 5 - 92844088 ggggt-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328075 5 + 96509753 ggggt-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799301 5 - 16982598 ggggt-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606674 5 - 3785965 ggggt-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101369v1 131382 5 + 156971 ggggt-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481301 5 - 5823884 GGGGT-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132299 5 + 159171411 tgggt-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198025 5 + 16356641 tgggt-- i saiBol1.JH378156 C 0 C 0 s dasNov3.JH569290 180977 5 - 397369 --CGCCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e otoGar3.GL873542 22764199 0 + 22939663 C a score=38830.000000 s hg38.chr20_KI270870v1_alt 10466 7 + 183433 gatgatg s panPan2.chr20 62022456 7 + 62195757 gatgatg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412342 7 - 578057 gatgatg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937625 7 - 110113093 gatgatg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665559 7 - 92844088 gatggtg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328080 7 + 96509753 gatggtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799306 7 - 16982598 gatggtg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606679 7 - 3785965 gatggtg i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101369v1 131387 7 + 156971 gatggtg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481306 7 - 5823884 GATGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132304 7 + 159171411 gatggtg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198030 7 + 16356641 gatggcg i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180982 0 - 397369 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e otoGar3.GL873542 22764199 0 + 22939663 C a score=4200.000000 s hg38.chr20_KI270870v1_alt 10473 2 + 183433 gg s panPan2.chr20 62022463 2 + 62195757 gg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412349 2 - 578057 gg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937632 2 - 110113093 gg i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96328087 2 + 96509753 gG i macFas5.chr10 C 0 I 2 s calJac3.chr5 58132311 2 + 159171411 gg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198037 2 + 16356641 gg i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180982 0 - 397369 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C a score=13019.000000 s hg38.chr20_KI270870v1_alt 10475 11 + 183433 ggtgatggtgg s panPan2.chr20 62022465 11 + 62195757 cgtgatgatgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412351 11 - 578057 ggtggtggtgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937634 11 - 110113093 ggtgatggtgg i nomLeu3.chr13 C 0 C 0 s calJac3.chr5 58132313 11 + 159171411 ggtgatgatgg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198039 11 + 16356641 ggtgatgatgg i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180982 0 - 397369 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=600.000000 s hg38.chr20_KI270870v1_alt 10486 1 + 183433 g s panPan2.chr20 62022476 1 + 62195757 g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412362 1 - 578057 g i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937645 1 - 110113093 g i nomLeu3.chr13 C 0 I 2 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180982 0 - 397369 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=4011.000000 s hg38.chr20_KI270870v1_alt 10487 16 + 183433 ggtggtggggggggtg s panPan2.chr20 62022477 16 + 62195757 ggtgatggtgggggtg i panPan2.chr20 C 0 I 348 s gorGor5.CYUI01015848v1 412363 16 - 578057 ggtgatggtgggggtg i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180982 0 - 397369 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=1939.000000 s hg38.chr20_KI270870v1_alt 10503 34 + 183433 ggcgtg---atgatg--ggggtgggggtgggggtggggg s gorGor5.CYUI01015848v1 412379 39 - 578057 ggggtgggcatgatgatggggtggtggtgggggtggggg i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180982 0 - 397369 C e panPan2.chr20 62022493 348 + 62195757 I e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=0.000000 s hg38.chr20_KI270870v1_alt 10537 126 + 183433 tgatggtgggcgtgatggtgggggtgggggtgatgggggtgggcgtgatggtggatgtgatgggggtgggcatgatgatgggcgtgatgatgggggtggtggtgggggtgatggtgggggtggtgg e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180982 0 - 397369 C e panPan2.chr20 62022493 348 + 62195757 I e gorGor5.CYUI01015848v1 412418 0 - 578057 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=868.000000 s hg38.chr20_KI270870v1_alt 10663 11 + 183433 tgggggtgggg s panPan2.chr20 62022841 11 + 62195757 tgggggtggtg i panPan2.chr20 I 348 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540459 29 + 47698779 I e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180982 0 - 397369 C e gorGor5.CYUI01015848v1 412418 0 - 578057 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=1238.000000 s hg38.chr20_KI270870v1_alt 10674 5 + 183433 ggggg s panPan2.chr20 62022852 5 + 62195757 ggggg i panPan2.chr20 C 0 C 0 s canFam3.chr24 47540488 5 + 47698779 GAGGG i canFam3.chr24 I 29 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 180982 0 - 397369 C e gorGor5.CYUI01015848v1 412418 0 - 578057 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=-3080.000000 s hg38.chr20_KI270870v1_alt 10679 25 + 183433 t-gggcctgatgggggtgtgggcatg s panPan2.chr20 62022857 23 + 62195757 ttgggcgtgatgggg---tgggcgtg i panPan2.chr20 C 0 C 0 s canFam3.chr24 47540493 6 + 47698779 A-GGGCC------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 180982 25 - 397369 -CTGCCTTGGTGGGAGAGGAAACAGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e gorGor5.CYUI01015848v1 412418 0 - 578057 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e panTro5.chr20 66342915 824 + 66533130 I e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=-1107.000000 s hg38.chr20_KI270870v1_alt 10704 1 + 183433 -a s panTro5.chr20 66343739 1 + 66533130 -a i panTro5.chr20 I 824 C 0 s panPan2.chr20 62022880 1 + 62195757 -a i panPan2.chr20 C 0 C 0 s dasNov3.JH569290 181007 1 - 397369 T- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540499 0 + 47698779 C e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e gorGor5.CYUI01015848v1 412418 0 - 578057 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=8395.000000 s hg38.chr20_KI270870v1_alt 10705 26 + 183433 tgatgatgggcgtgatgatgatg-----ggg s panTro5.chr20 66343740 26 + 66533130 tgacgatgggggtgatgatgatg-----ggg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022881 26 + 62195757 tgatgatgggcgtgatgatgatg-----ggg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412418 31 - 578057 tgatgatgggcgtgatgatgatggtggtggg i gorGor5.CYUI01015848v1 C 0 C 0 s dasNov3.JH569290 181008 2 - 397369 ---------------------TG-------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540499 0 + 47698779 C e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e aotNan1.NW_018500483v1 2597322 10 + 11732439 I e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=6290.000000 s hg38.chr20_KI270870v1_alt 10731 24 + 183433 ggtgatgatggg---------------------catgatgatggg s panTro5.chr20 66343766 17 + 66533130 g----tgatg------------------------atgatgatggg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022907 45 + 62195757 ggtgatgatgggggtgatgatgatgggggtgatgatgatgatggg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412449 27 - 578057 ggtgatggtggacgtg------------------atgatgatggt i gorGor5.CYUI01015848v1 C 0 C 0 s aotNan1.NW_018500483v1 2597332 24 + 11732439 ggtgatggtggg---------------------ggtgatggtggg i aotNan1.NW_018500483v1 I 10 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540499 0 + 47698779 C e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e mm10.chr2 181723170 860 + 182113224 I e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 181010 0 - 397369 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=3545.000000 s hg38.chr20_KI270870v1_alt 10755 6 + 183433 ggt-gat s panTro5.chr20 66343783 6 + 66533130 ggt-gat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022952 6 + 62195757 ggt-gat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412476 7 - 578057 ggtgggt i gorGor5.CYUI01015848v1 C 0 C 0 s aotNan1.NW_018500483v1 2597356 6 + 11732439 ggt-gat i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181724030 6 + 182113224 GGC-AAG i mm10.chr2 I 860 C 0 e proCoq1.NW_012150197v1 1783899 109 - 2029793 I e canFam3.chr24 47540499 0 + 47698779 C e cerAty1.NW_012001373v1 3606686 0 - 3785965 C e colAng1.NW_012114444v1 5481313 0 - 5823884 C e chlSab2.chr2 90229239 0 - 90373283 C e micMur3.chr18 56781920 1059 + 57149010 I e dasNov3.JH569290 181010 0 - 397369 C e manLeu1.NW_012101369v1 131394 0 + 156971 C e saiBol1.JH378156 16198050 0 + 16356641 C e macNem1.NW_012014244v1 16799313 0 - 16982598 C e cebCap1.NW_016107870v1 1059127 69 + 1231380 I e calJac3.chr5 58132324 0 + 159171411 C e nomLeu3.chr13 109937646 2 - 110113093 I e rheMac8.chr10 92665566 0 - 92844088 C e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=8666.000000 s hg38.chr20_KI270870v1_alt 10761 1 + 183433 g s panTro5.chr20 66343789 1 + 66533130 g i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022958 1 + 62195757 g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412483 1 - 578057 g i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92665566 1 - 92844088 g i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799313 1 - 16982598 g i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606686 1 - 3785965 g i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229239 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131394 1 + 156971 g i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481313 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s cebCap1.NW_016107870v1 1059196 1 + 1231380 G i cebCap1.NW_016107870v1 I 69 C 0 s aotNan1.NW_018500483v1 2597362 1 + 11732439 g i aotNan1.NW_018500483v1 C 0 I 4 s proCoq1.NW_012150197v1 1784008 1 - 2029793 G i proCoq1.NW_012150197v1 I 109 C 0 s mm10.chr2 181724036 1 + 182113224 A i mm10.chr2 C 0 C 0 s dasNov3.JH569290 181010 1 - 397369 G i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47540499 0 + 47698779 C e micMur3.chr18 56781920 1059 + 57149010 I e saiBol1.JH378156 16198050 0 + 16356641 C e calJac3.chr5 58132324 0 + 159171411 C e nomLeu3.chr13 109937646 2 - 110113093 I e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=22063.000000 s hg38.chr20_KI270870v1_alt 10762 3 + 183433 gtg s panTro5.chr20 66343790 3 + 66533130 gCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022959 3 + 62195757 gCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412484 3 - 578057 gtg i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92665567 3 - 92844088 GTG i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799314 3 - 16982598 GTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606687 3 - 3785965 GTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229240 3 - 90373283 GTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131395 3 + 156971 GTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481314 3 - 5823884 GTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132324 3 + 159171411 gTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198050 3 + 16356641 gTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1059197 3 + 1231380 GTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2597367 3 + 11732439 CTG i aotNan1.NW_018500483v1 I 4 C 0 s proCoq1.NW_012150197v1 1784009 3 - 2029793 GTG i proCoq1.NW_012150197v1 C 0 C 0 s mm10.chr2 181724037 3 + 182113224 ATG i mm10.chr2 C 0 C 0 s canFam3.chr24 47540499 1 + 47698779 A-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 181011 3 - 397369 GTG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56781920 1059 + 57149010 I e nomLeu3.chr13 109937646 2 - 110113093 I e otoGar3.GL873542 22764199 0 + 22939663 C e macFas5.chr10 96328089 2 + 96509753 I a score=46230.000000 s hg38.chr20_KI270870v1_alt 10765 3 + 183433 CCC s panTro5.chr20 66343793 3 + 66533130 CCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022962 3 + 62195757 CCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412487 3 - 578057 CCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937648 3 - 110113093 CTC i nomLeu3.chr13 I 2 C 0 s rheMac8.chr10 92665570 3 - 92844088 CTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328091 3 + 96509753 CTC i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16799317 3 - 16982598 CTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606690 3 - 3785965 CTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229243 3 - 90373283 CTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131398 3 + 156971 CTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481317 3 - 5823884 CTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132327 3 + 159171411 CTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198053 3 + 16356641 CTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1059200 3 + 1231380 CTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2597370 3 + 11732439 CTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1784012 3 - 2029793 CTC i proCoq1.NW_012150197v1 C 0 C 0 s mm10.chr2 181724040 3 + 182113224 CTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47540500 3 + 47698779 CCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 181014 3 - 397369 CTC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56781920 1059 + 57149010 I e otoGar3.GL873542 22764199 0 + 22939663 C a score=451815.000000 s hg38.chr20_KI270870v1_alt 10768 33 + 183433 AGGCCCTTCAGCACCGCAATATGCTGCGGAAGT s panTro5.chr20 66343796 33 + 66533130 AGGCCCCTTAGCACCGCAATATGCTGCGGAAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022965 33 + 62195757 AGGCCCTTCAGCACCGCAATATGCTGCGGAAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412490 33 - 578057 AGGCCCCTCAGCACCGCAATATGCTGCGGAAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937651 33 - 110113093 AGGCCCCTTAGCACCGGAACATGGTGCGGAAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665573 33 - 92844088 AGGCCCCTCAGCACCTGAACATGGTACGGAAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328094 33 + 96509753 AGGCCCCTCAGCACCTGAACATGGTACGGAAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799320 33 - 16982598 AGGCCCCTCAGCACCTGAACATGGTACGGAAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606693 33 - 3785965 AGGCCCCTCAGCACCTGAACATGGTACGGAAAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229246 33 - 90373283 AGGCCCCTCAGCACCTGAACATGGTACGGAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131401 33 + 156971 AGGCCCCTCAGCACCTGAACATGGTACGGAAAT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481320 33 - 5823884 AGGCCCCTCAGCACCCGAACAGGGTACAGAAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132330 33 + 159171411 AGGCCCCTCAGCACTGGAACATGGTGCGGAAAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198056 33 + 16356641 AGGCCCCTCAGCACCGGAACATGGTGCGGAAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1059203 33 + 1231380 AGGCCCCTCAGCACCGGAACATGGTGCGGAAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2597373 33 + 11732439 AGGCCCCTCAGCACCGGAACATGGTGCGGAAAT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1784015 33 - 2029793 GGGCCCCTCAGCACCGGAACACGGCGTGGAAAT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22764199 33 + 22939663 AGGCCCCTCAGCACTAGAATGTGGTGTGAAAAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181724043 33 + 182113224 AGGCCTCCTGAAGCAGGATTATGGTACAGAAAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47540503 33 + 47698779 AGGCCCCTGAGCACTGGAACATGCTCTGGAGGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 181017 32 - 397369 AGGCCCAT-GGCCCTGGGAGAGGGTGCGGCAGC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56781920 1059 + 57149010 I a score=4738316.000000 s hg38.chr20_KI270870v1_alt 10801 277 + 183433 TCTTCCGGAAGTTGTCATCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATACTGATGACCAGTGGGGTCTGGGGCAGGTCCGTGGTCAGGGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGACGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCTCCAGA---GCGGAGCCGCACGGCCCGCAGCCTGCGCAGGAGGTC s panTro5.chr20 66343829 277 + 66533130 TCTTCCGGAAGTTGTCATCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGTGGGGTCTGGGGCAGGTCCGTGGTCAGGGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGACGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCTCCGGA---GCGGAGCCGCACGGCCCGCAGCCTGCGCAGGAGGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62022998 277 + 62195757 TCTTCCGGAAGTTGTCATCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGTGGGGTCTGGGGCAGGTCCGTGGTCAGGGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACAAGGACCAGGACGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCTCCAGA---GCGGAGCCGCACGGCCCGCAGCCTGCGCAGGAGGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412523 277 - 578057 TCTTCCGGAAGTTGTCGTCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGTGGGGTCTGGGGCAGGTCCGTGGTCAGGGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGACGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCTCCAGA---GCGGAGCCGCACGGCCCGCAGCCTGCGCAGGAGGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937684 277 - 110113093 TCTTCCGGAAGTTGTCGTCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCATAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGCGGGGTCTGGGGCAGGTCTGTGGTCAGGGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCTCCAGA---GCGGAGCCGCACCGCCCGCAGCCTGCGCAGGAGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665606 277 - 92844088 TCTTCCGGAAGTTGTCGTCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGTGGGGTCTGGGGCAGGTCTGTGGTCAGCGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCGCCAGA---GCAGAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328127 277 + 96509753 TCTTCCGGAAGTTGTCGTCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACACGCTGATGACCAGTGGGGTCTGGGGCAGGTCTGTGGTCAGCGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCGCCAGA---GCAGAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799353 277 - 16982598 TCTTCCGGAAGTTGTCGTCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGTGGGGTCTGGGGCAGGTCTGTGGTCAGCGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCGCCAGA---GCAGAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3606726 277 - 3785965 TCTTCCGGAAGTTGTCGTCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCATGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGTGGGGTCTGGGGCAGGTCTGTGGTCAGGGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCGCCAGA---GCAGAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229279 277 - 90373283 TCTTCCGGAAGTTGTCGTCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGTGGGGTCTGGGGCAGGTCAGTGGTCAGGGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCGCCAGA---GCAGAGCCGCACGGCCCGTAGCCTGCGCAGCAGGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131434 277 + 156971 TCTTCCGGAAGTTGTCGTCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGTGGGGTCTGGGGCAGGTCTGTGGTCAGGGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGACCAGCAC-----GACGAGGACCAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCGCCAGA---GCAGAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481353 277 - 5823884 TTTTCCGGAAGTTGTCGTCTAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGTGGGGTCTGGGGCAGGTCTGTGGTCAGGGCCACGACAGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----GACGAGGACCAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCGCCAGA---GCAGAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132363 277 + 159171411 TCTTGCGGAAGCTGTCGTCCAGAAAGGCATAGAGGAAGGGGTTCAGGCACGAGTTGGCATAGCTGAGGCTGGTGATGACATAGGACATGCTGATGACCAGCGGGGTCTGGGGCAGGTCTGTGGCCAGGGCCACGATGGAGGCCAGGTGGAAGGGTGTCCAGCAGAGGAGGCACACGGTCAGCAC-----AACGAGGACGAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCACCAGA---GCAGAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198089 277 + 16356641 TCTTGCGGAAGCTGTCGTCCAGAAAGGCATAGAGGAAGGGGTTCAGGCACGAGTTGGCATAGCTAAGGCTGGTGATGACGTAGGACATGCTGATGACCAGCGGGGTCTGGGGCAGGTCTGTGGCCAGGGCCACGACGGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGTCAGCAC-----GACGAGGACGAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCGCCAGA---GCAGAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1059236 277 + 1231380 TCTTGCGGAAGCTGTCGTCCAGAAAGGCATAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACATGCTGATGACCAGCGGGGTCTGGGGCAGGTCTGTGGCCAGGGCCACGATGGAGGCCAGGTGGAAGGGTGTCCAGCAGAGGAGACACACGGTCAGCAC-----GACCAGGACGAGGATGGTCACCTTCCGCCTGGCCTTGCCTAGAGCCTTGGCGCCAGA---GCAGAGCTGCACGGCCCTCAGCCTGCGCAGCAGGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2597406 277 + 11732439 TCTTGCGGAAGCTGTCGTCCAGAAAGGCGTAGAGGAAGGGGTTCAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACATAGGACATGCTGATGACCAGCGGGGTCTGGGGCAGGTCTGTGGCCAGGGCCACGATGGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGTCAGCAC-----GACGAGGACGAGGATGGTCACCTTCCGCCGGGCCTTGCCTAGAGCCTTGGCGCCGGA---GCAGAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56782979 277 + 57149010 TCTTGCGGAAGCCGTCGTCCAGGAAGGCGTAGAGGAAGGGGTTGAGGCAGGAGTTGGCGTAGCTGAGGCCGGTGATGGCGTAGGACACGCCGATGACCAGTGACGTCTGGGGCAGGTCCGTGGTCAGGGCCACGATGGAGGCCACGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----CACGAGGACCAGGACGGTCACCTTCCGCCGGGCCTTGCTCAGAGCCTTGGCGCCCGT---GCGCAGCCGCACGGCCCGCAGCCTGCGCAGCAGGTC i micMur3.chr18 I 1059 C 0 s proCoq1.NW_012150197v1 1784048 277 - 2029793 TCTTGCGGAAGCCGTCGTCCAGGAAGGCGTAGAGGAAGGGGTTGAGGCACGAGTTGGCGTAGCTGAGGCTGGTGATGACGTAGGACACGCCGATGACCAGCGAGGTCTGCGGCAGGTCCGTGGTCAGGGCCACGACGGAGGCCAGGTGGAAGGGCGTCCAGCAGAGGAGGCACACGGCCAGCAC-----CACGAGGACCAGGACGGTCACCTTCCGCCGGGCCTTGCTCAGAGCCTTGGCGCCAGA---GCGGAGCCTCACAGCCCGCAGCCTGCGCAGCAGGTC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22764232 251 + 22939663 TCTCAAAGAAGCTACCATCCAGGGGGGCGTAGAGGAAGGGGTTGAGGCCCACGTTGGCATAGCTGAGGCTGCTGATGATATATGACATGCA----------GACATTTGGGGGAGGTCTGTGGTCAGAGCC-CGTTGGAGGACAGGTGGAAGAGTGTTCAGCAGGGGAGGCACACGGACAGCACCACATCACAAGGACTAGCATGGTCACTTTCCTCCGGGCCTTGCTCTG----------------------AGCTGCACAA-CTACAGTCTGTATGGCAGGTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181724076 277 + 182113224 TCTTGTGGAAGTTGTCATTCAGGAATGAGTTCATGAAAGGATCGAAGCATGAGTTGACATAGCTGAGGCTGGTGATGGCATAGGAGATACCAATAACCAGGGATATGTAGGGCATGCCTGTAGTCAGGGCTACCACAGAGGCCATGTGAAAGGGCATCCAGCAAAGAGAGCGCATGGCCAACAC-----AGTGGGGACCAGGACAGTTATCTTCCTCTTGGCCTTGCCTAGAACGTTCATGCCAGA---GTGGAGCTTCATGGTATAAAGTCTGCACAGCAGGTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47540536 273 + 47698779 TGTTTTGGAAGCTCTCGTCCAGGAAGGCGCAGAGG-AGGGGCCGAGACAGGAGCTGGCATAGCTGAGGCTGGTGATGACGCAGGAGATGCTGATGACCAGCGGCGTCTGGGGCCGGTCTGCAGTCAGGGCCACGACGGGGGCCACGTGGAAGGG--TCCAGCAGAGCAGGCCCGCGGCCAGAAC-----AGCCC-TACCGGGATGGTCACCGTCCGCTGTGCCTGGCCCAGAGCCTCGGCTCTGAG---GTGCCGTCGCAGGGCCCACAGCCTCCGGAGCAGGTC i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 181049 258 - 397369 TCTGGCAGAAGC------CCTGGAAGGCAT-GAAGAAGCAGCTGCGGCACGAGCTGGCGTAGCCGAGGCTGGCGAGGGCGTGAGAGAGGCTGACGACCAGCGGGGCCTGGGGCAGGTTCCCG--CGGAGCCCTGATGGAGGCCAGGTGGACG-GCGTCCAGCAGCGCACGCTCCCGGCCAGCGT-----GGGCAGCGGGAGGAGGCGCTACATCTGC-TGGCCCTGC------CCCTGGGGCCAGAGCTGCAGGGTAGCCCAGCCTCAGGCACGCGCAGG----- i dasNov3.JH569290 C 0 C 0 a score=5407394.000000 s hg38.chr20_KI270870v1_alt 11078 347 + 183433 TGTGTAGAGCACACAGATGGTG-CACACGGGCAGCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCTGCTCGGGCCACGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCGTTGCTGTAGACGCCAGCGAAAGAGAAGAAGGGCAGAACCAGGACCGTGACGCCCAGCCAGACACACAGGCTGGCGACCTTCGCCCCCCGGTAGGTGCGCCAGGGCATGTGGCGGGACCTCACGGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGACGGCCAGCACCAGCT s panTro5.chr20 66344106 347 + 66533130 TGTGTAGAGCACACAGATGGTG-CACACGGGCAGCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCACGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCATTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGGACCGTGACGCCCAGCCAGACACACAGGCTGGCGACCTTCGCCCCCCGGTACGTGCGCCAGGGCATGTGGCGGGACCTCACGGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGACGGCCAGCACCAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62023275 347 + 62195757 TGTGTAGAGCACACAGATGGTG-CACACGGGCAGCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCACGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCATTGCTGTAGACGCCAGCGAAAGAGAAGAAGGGCAGAACCAGGACCGTGACGCCCAGCCAGACACACAGGCTGGCGACCTTCGCCCCCCGGTAGGTGCGCCAGGGCATGTGGCGGGACCTCACGGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGACGGCCAGCACCAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 412800 347 - 578057 TGTGTAGAGCACACAGATGGTG-CACACGGGCACCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCACGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCGTTGCTGTAGACGCCAGCAAAACAGAAGAAGGGCAGAACCAGGACCGTGACGCCCAGCCAGACACACAGGCTGGCGACCTTCGCCCCCCGGTAGGTGCGCCAGGGCATGTGGCCGGACCTCACGGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGACGGCCAGCACCAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109937961 347 - 110113093 TGTGTAGAGCACACAGATGGTG-CACACAGGCACCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCACGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCGTTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAAGACCGTGACGCCCAGCCAGACACACAGGCTGGCGACCTTCGCCCCCCGGTAGGTGCGCCAGGGCATGTGGTGGGACCTCACAGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGATGGCCAGCACCAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92665883 347 - 92844088 TGTGTAGAGCACACAGATGGTG-CACACAGGTACCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCGCGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCATTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGAACCGTGACACCCAGCCAGACACACAGGCTGGTGACCTTTGCCCCCCGGTAGGTGCGCCAGGGCATGTGGTGGGACCGCACAGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGATGGCCAGCACCAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328404 347 + 96509753 TGTGTAGAGCACACAGATGGTG-CACACAGGTACCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCGCGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCATTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGAACCGTGACACCCAGCCAGACACACAGGCTGGTGACCTTTGCCCCCCGGTAGGTGCGCCAGGGCATGTGGTGGGACCGCACAGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGATGGCCAGCACCAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799630 347 - 16982598 TGTGTAGAGCACACAGATGGTG-CACACAGGTACCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCTGCGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCATTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGAACCGTGACACCCAGCCAGACACACAGGCTGGTGACCTTTGCCCCCCGGTAGGTGCGCCAGGGCATGTGGTGGGACCGCACAGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGATGGCCAGCACCAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3607003 347 - 3785965 TGCGTAGAGCACACAGATGGTG-CACACAGGTACCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCGCGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCATTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGAACCGTGACACCCAGCCAGACACACAGGCTGGCGACCTTTGCCCCCCGGTAGGTGCGCCAGGGCATGTGGTGGGACCGCACAGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGATGGCCAGCACCAGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229556 347 - 90373283 TGTGTAGAGCACACAGATGGTG-CACACAGGTACCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCGCGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCATTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGAACCGTGACACCCAGCCAGACGCACAGACTGGCGACCTTTGCCCCCCGGTAGGTGCGCCAGGGCATGTGGTGGGACCGCACAGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCAATGGCCAGCACCAGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 131711 347 + 156971 TGCGTAGAGCACACAGATGGTG-CACACAGGTACCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCGCGGGAAGCTCAGCCCACAGCTTGGGACCTGCAGCTCATTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGAACCGTGACACCCAGCCAGACACACAGGCTGGCGACCTTTGCCCCCCGGTAGGTGCGCCAGGGCATGTGGTGGGACCGCACAGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGATGGCCAGCACCAGCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481630 347 - 5823884 TGTGTAGAGCACACAGATGGTG-CACACAGGTACCACGAAGCCCAGGACCAACGTGTAGACACGGCTGGCCTTGAACCAGACCCGCTCGGGCCGCGGGAAGCTCAGCCCGCAGCTTGGGACCTGCAGCTCATTGCTATAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGAACCGTGACACCCAGCCAGACACACAGGCTGGCGACCTTTGCCCCCCGGTAGGTGCGCCAGGGCATGTGGTGGGACCGCACAGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCTAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGATGGCCAGCACCAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132640 347 + 159171411 TGCGTAGAGCACACAGATGGTA-CACACAGGCACCACGAAGCCCAGGACCAATGTGTAGATGCGGCTGGCCTTGGACCAGGCCTGCTCGGGCTGCGGGAAGCTCAGCCCACAGCTTGGTACCTGCAGCTCATTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGGACCGTGACGCCCAGCCAGATGCACAGGCTGACAACCTTTGCCCCCCGGTAGGTGCGCCAGGGCATGTGGCGGGACCGAACCGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATTATGGCCAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCAATGGCCAGCGCCAGCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198366 347 + 16356641 TGTGTAGAGCACACAGATGGTG-CACACGGGCACCACGAAGCCCAGGACCACCGTGTAGACGCGGCTGGCCTTGGACCAGGCCTGCTCGGGCTGCGGGAAGCTCAGCCCACAGCTTGGCACCTGCAGCTCATTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGCAGAACCAGGACGGTGACGCCCAGCCAGACACACAGGCTGATGACCTTCGCCCCCCGGTAGGTGCGCCAGGGCATGTGGCGGGACCGCACGGTGGCCAGCACCACCAGGTATCGGTCCGCGCTCATCACGGCCAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGATGGCCAGCGTCAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1059513 347 + 1231380 TGTGTAGAGCACACAGATGGTG-CACACAGGCACCACGAAGCCCAGGACCACCGTGTAGATGCGGCTGGCCTTGGACCAGGCCTGCTCGGGCTGCGGGAAGCTCAGCCCACAGCTTGGCACCTGCAGCTCGTTGCTGTAGACGCCAGCAAAAGAGAAGAAGGGTAGAACCAGGACCGTGACGCCCAGCCAGACACACAGGCTGATGACCTTCGCCCCCCGGTAGGTGCGCCAGGGCATGTGGCGGGACCGCACGGTGGCCAGCACCACCAGGTATCGGTCCACGCTCATCACGGCCAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGACGGCCAGCGTCAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2597683 347 + 11732439 TGTGTAGAGCACGCAGATGGTG-CACACGGGCACCACGAAGCCCAGGACCAACGTGTAGACGCGGCTGGCCTTGGACCAGGCCTGCTCGGGCTGCGGGAAGCTCAGCCCACAGCTTGGCACCTGCAGCTCATTGCTGTAGACGCCGGCAAAAGAGAAGAAGGGCAGAACCAGGACCGTGACGCCCAGCCAGACGCACAGGCTGACGACCTTCGCCCCCCGGTGGGTGCGCCAGGGCATGTGGCGGGACCGCACCGTGGCCAGCACCACCAGGTACCGGTCCACACTCATCACGGCCAGGAAGTAGATGCTGGAGAAGATGTTGTAGTGGTCGATGGCCAGCGCCAGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56783256 347 + 57149010 TGCGTAGAGCGTGCAGATGGTG-CACACGGGCACCAGGAAGCCCAGCACCAGCGTGTAGACGCGGCTGGCCTGGAGCCAGGCCCGCTCGGGCGGCGGGAAGCTCAGCCCGCAGCTCGGGACCTGCAGCTCGTTGCTGTAGACGCCGGCGAAGCAGAAGAAGGGCAGGACCAGCACCGTCATGCCCAGCCAGACGCACAGGCTGGCCACCTTGGCCGCCCGGCGGGTGCGCCAGGGCGCGCGGCGGGACCGCACCGTGGCCAGCACCACCAGGTAGCGGTCCAGGCTCATCGCGGCCAGGAAGTAGACGCTGGAGAAGATGTTGTAGTGGTCGGCGGTCAGCACCAGCT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1784325 347 - 2029793 GGCGTAGAGCACGCAGACGGTG-CACACGGGCACCACGAAGCCCAGGACCAGCGTGTAGACGCGGCTGGCCTGGAACCAGGCCCGCTCGGGCCGGGGGAAGCTCAGCCCACAGCTGGGGACCTGCAGCTCGTTGCTGTAGACGCCAGCGAAGGAGAAGAAGGGCAGCACCAGGACCGTCACGCCCAGCCAGACACACAGGCTGGTGACCTTCGCCCCCCGGTAGGTGCGCCAGGGCGTGCGGCGCGACCGCACGGTGGCCAGCACCACCAGGTAGCGGTCCACGCTCATCACGGCCAGGAAGTAGACGCTGCAGAAGATGTTGTAGTGGTCGGCGGTCAGCACCAGCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22764483 344 + 22939663 AATGTAGAGCACACAGATGGTGTCACACCGGCACTGAAAAGCCCAGGGCCAGTGTGTAGATATGGCTGGCCTTGAACTA-GTCTGCTTGGGCTGTGGGCAGCTCAGCCCATAGTTTGGGACCTACAGCTCATTGCTGTAGATGCCAGTGAAGGAGAAGAAGGGCAGGGCTAGGATCATGACACCCAGCCAGATACATGGGCTGGTGATCTTTGCTCCCCTGTAGGTTCACCAGGGTATGGGGTGTGACTGTGCTGTGGCCAGCTAGGCCGTGTAGTGGTTCATGCTAATCACGGCCAGGAAGTTGACATTGG---AGATGTTACAGTGGTTGGTGGCCAGTGCCAGCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181724353 262 + 182113224 TACATATGACATGCAGATGATG-CACAATGGCATTGCAAAGCCAAGAACCACTGTATATGAGTGGCTGGCCTGAAACCAGGCCCACTCTGGTCTCAGGAAACTTAGCCCACAACTGGGTGCC---------------------------------------------------------------------------------ACAACTTTTGCTCCCTC-TAGGTGTGCCTAGGCAACTGGCAAGATTGCACAGTGGCCAGTACTGCTAAGTGGCAGTCCATACGCATCACAACCAGGAAGTAGATGCTGGAGAAGATGT---AGTAGTCAGTGGTCAGCACCAGTT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 181307 284 - 397369 ----------------------------------------------------------GCCACAGGCGGCCTCGAGCCCGGCTTGCTCTGGTGGTGG--AGCTCCGCCCGCAGCTTGTGACCTGCAGCCCATTGCTGCGGTCACCAGAAAAGGTGATGAGGGGCAGCCCCTTAGCGGTGAGGCCACGCCAGATGCA--GGCTGGCAACC-TCGCCTCCTGGCA-GCGCCCTGGTGTGGGTGGTGGAGCTGTGCACAGGCCAGCATGACCGAGGAGTGGTCTGTGCTCGTGGAGGTCAGCAGGTGGATGCTGGAGAAGATGTGTCAATGATCGGTGGCAAGGACGGGCT i dasNov3.JH569290 C 0 I 572 e canFam3.chr24 47540809 2 + 47698779 I a score=2869240.000000 s hg38.chr20_KI270870v1_alt 11425 190 + 183433 TGCAGAGCAGCTCCCCGAAGGGCCAGTACTGCAGCAGGTGCTCCGCGATGTTGACGGGCAGTACCAGCGTGAAGAGCCCGTCGGCGACGGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTTAGGATTACAAGGATGACGGCCGTGTTGCCAGTCAGCCCCACAGCACAGAT s panTro5.chr20 66344453 190 + 66533130 TGCAGAGCAGCTCCCCGAAGGGCCAGTACTGCAGCAGGTGCTCCGCGATGTTGACGGGCAGTACCAGCGTGAAGAGCCCGTCGGCGACGGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACGGCTGTGTTGCCAGTCAGCCCCACAGCACAGAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62023622 190 + 62195757 TGCAGAGCAGCTCCCCGAAGGGCCAGTACTGCAGCAGGTGCTCCGCGATGTTGACGGGCAGTACCAGCGTGAAGAGCCCGTCGGCGACGGCCAGGTTCAGGATGAACACGTTGGTCACCGTTTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACGGCCGTGTTGCCAGTCAGCCCCACAGCACAGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 413147 190 - 578057 TGCAGAGCAGCTCCCCGAAGGGCCAGTACTGCAGCAGGTGCTCCGCGATGTTGACGGGCAGTACCAGCGTGAAGAGCCCGTCGGCGATGGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACGGCCGTGTTGCCAGTCAGCCCCACAGCACAGAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109938308 190 - 110113093 TGCAGAGCAGCTCCCCGAAGGGCCAGTACTGCAGCAGGTGCTCCGCGATGTTGACAGGCAGTACCAGTGTGAAGAGCCCGTCGGCGATGGCCAGGTTCAGGATGAACACATTGGTCACTGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACAGCCGTGTTGCCAGTCAGCCCCACGGCACAGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92666230 190 - 92844088 TGCAGAGCAGCTCCCCAAAGGGCCAGTGCTGCAGCAGGTGCTCTGCGATGTTGACAGGCAGTACCAGTGTGAAGAGCCCATCAGCGATGGCCAGGTTCAGGATGAACACGTTGGTCACTGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACGGCCGTGTTGCCAGTCAGTCCCACGGCACAAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328751 190 + 96509753 TGCAGAGCAGCTCCCCAAAGGGCCAGTGCTGCAGCAGGTGCTCTGCGATGTTGACAGGCAGTACCAGTGTGAAGAGCCCATCAGCGATGGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACGGCCGTGTTGCCGGTCAGTCCCACGGCACAAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16799977 190 - 16982598 TGCAGAGCAGCTCCCCAAAGGGCCAGTGCTGCAGCAGGTGCTCTGCGATGTTGACAGGCAGTACCAGTGTGAAGAGCCCATCAGCGATGGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACGGCCGTGTTGCCAGTCAGTCCCACGGCACAAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3607350 190 - 3785965 TGCAGAGCAACTCCCCGAAGGGCCAGTGCTGCAGCAGGTGCTCTGCGATGTTGACAGGCAGTACCAGTGTGAAGAGCCCATCAGCGATGGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACGGCCGTGTTGCCAGTCAGTCCCACGGCACAAAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90229903 190 - 90373283 TGCAGAGCAGCTCCCCGAAGGGCCAGTGCTGCAGCAGGTGCTCTGCGATGTTGACAGGCAGTACCAGTGTGAAGAGCCCATCAGCGATGGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACAGCTGTGTTGCCAGTCAGTCCCACGGCACAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 132058 190 + 156971 TGCAGAGCAACTCCCCGAAGGGCCAGTGCTGCAGCAGGTGCTCTGCGATGTTGACAGGCAGTACCAGTGTGAAGAGCCCATCAGCGATGGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACGGCCGTGTTGCCAGTCAGTCCCACGGCACAAAT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5481977 190 - 5823884 TGCAGAGCAGCTCCCCGAAGGGCCAGTGCTGCAGCAGGTGCTCTGCGATGTTGACAGGCAGTACCAGTGTGAAGAGCCCATCGGCGATGGCCAGGTTCAGGATGAACACATTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATTACAAGGATGACGGCCGTGTTGCCAGTCAGGCCCACGGCACAAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58132987 190 + 159171411 TGCAGAGCAGCTCCCCGAAGGGCCAGTGCTGCAGCAGGTGCTCTGCAATATTGACAGGCAGCACCAGTGTGAAGAGCCCGTCAGCAATGGCCAGATTCAAGATGAACACGTTGGTCACCGTCTTCATCTTGGGTGCCCTCAGGATGACAAGGATGACGGCCATGTTGCCACTCAGCCCCACAGCACAGAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198713 190 + 16356641 TGCAGAGCAGCCCCCCGAAGGGCCAGTGCTGCAGCAGGTGTTCTGCGATATTGACAGGCAGCACCAATGTGAAGAGCCCATCAGCAATGGCCAGGTTCAAGATGAACACGTTGGTCACCGTCTTCATCTTGGGTGCCCTCAGGATGACCAGGATGACGGCTGTGTTGCCGGTCAGCCCCACGGCGCAGAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1059860 190 + 1231380 TGCAGAGAAGCTCCCCAAATGGCCAGTGCTGTAGCAGGTGCTCTGCAATATTGACGGGCAGCACAAGTGTGAAGAGCCCGTCAGCAATGGCCAGATTCAAGATGAACATGTTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATGACAAGGATGACGGCCGTGTTGCCGGTCAGCCCCACGGCGCAGAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2598030 190 + 11732439 TGCAGAGTAGCTCCCCAAAGGGCCAGTGCTGCAGCAGGTGCTCTGCAATGTTGACAGGCAGCACCAGTGTGAAGAGCCCGTCAGCGACGGCCAGATTCAAGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTCAGGATGACAAGGATGACGGCCGTGTTGCCGGTCAGCCCCACGGCGCAGAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56783603 190 + 57149010 TGCAGAGCGGCTCCCCGAAGGGCCAGCGCTGCAGCAGGTGCTCCGCGATGTTGGCCGGCAGCACCAGCGCGAAGAGCCCGTCCGCCACCGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCGCAGGATCACGAAGATGACGGCCGTGTTGCTGGCCAGCCCCACGGCGCAGAT i micMur3.chr18 C 0 I 680 s proCoq1.NW_012150197v1 1784672 190 - 2029793 TGCAGAGCAGCTCCCCGAAGGGCCAGCGCTGCAGCAGGTGCTCGGCGATGCTGGCCGGCAGCACCAGCGTGAAGAGCCCGTCGGCCACGGCCAGGTTCAGGATGAACACGTTGGTCACCGTCTTCATCTTGGGCGCCCTGAGGATCACAAAAATGACGGCCGTGTTGCTGGTCAGCCCCACGGCGCAGAT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22764827 188 + 22939663 TGCAGAAACCCTCCCCAAGGGGCTGGCACTGCAGCTGGTGCTT-GCGATGTTGGCC-GCAGTACCAATGAGAAGAGCCTGTTGGTGACAGCTGGGTTCAGGATGAACACGTTACTCACTGTCTTCATCTTGGGTGCCCTGAGGATCACAAGGACAATGGCCTCGTTACCAGTCAACCCTGCAGCACAGGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181724615 185 + 182113224 TGCAGAATGGCTCTCCAAAA----AGTGCTGTAGCAGGTACTCAGTGATACTGGTGGG-AATGTCAGCACAAAGAGCCCATCAGCAATAGTTAGGCTCAGGACAAACACATTAGTTACTCTTTTCACCTTTGGTGCCCTCAGGATCACATAAATGATAGCCAATTTAACAATTAGGCCCATAGCACAGAT i mm10.chr2 C 0 C 0 e canFam3.chr24 47540809 2 + 47698779 I e dasNov3.JH569290 181591 572 - 397369 I a score=2625909.000000 s hg38.chr20_KI270870v1_alt 11615 240 + 183433 CCCGGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGTGGCTCGGAGAAGGTGGCATTGTGGCCAGTGCCATTGTCCTGAGAGACGTTGGCACCCATCGTGGGGAGGGAG----AAGGAGCCCCTGCTGTCAAGGGGCTCTGGGTGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACGATTTGCGCCCTGGGCAGGTGGGAGGTG-CCTTGGAGTTGGGTATCTGGTTGGGGGCCTC s panTro5.chr20 66344643 240 + 66533130 CCCGGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCGGAGAAGGTGGCATTGTGCCCAGTGCCATTGTCCTGAGAGACGTTGGCACCCATCGTGGGGAGGGAG----AAGGAGCCCCTGCTGTCAAGGGGCTCTGGGTGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACGATTTGCGCCCTGGGCAGGTGGGAGGTG-ACTTGGAGTTGGGTATCTTGTTGGGGGCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62023812 240 + 62195757 CCCGGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCGGAGAAGGTGGCATTGTGGCCAGTGCCATTGTCCTGAGAGACGTTGGCACCCATCGTGGGGAGGGAG----AAGGAGCCCCTGCTGTCAAGGGGCTCTGGGTGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACGATTTGTGCCCTGGGCAGGTGCGAGGTG-CCTTGGAGTTGGGTATCTTGTTGGGGGCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 413337 240 - 578057 CCCGGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCGGAGAAGGTGGCATTGTGGCCAGTGCCATTGTCCTGAGAGACGTTGGCACCCATCGTGGGGAGGGAG----AAGGAGCCCCTGCTGTCAAGGGGCTCTGGGTGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACGATTTGCGCCCTGGGCAGGTGGGAGGTG-CCTTGGAGTTGGGTATCTGGTTGGGGGCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109938498 240 - 110113093 CCCGGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGTGGCTCAGAGGAGGTGGCATTGTGGCCGGTGCCATTGTCCGGAGAGACGTTGGCACCCATCGTGGGGAGGGAG----AAGGAGCCCCTGCTGTCAGGGGGCTCTGGGTGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACAATGTGTGCCCTGGGCAGGTGGGAGGTG-CCTTGGAGTTGGGTGTCTGGTTGGGGGCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92666420 240 - 92844088 CCCAGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCTGAGAAGGTGGCATTGTGGCCGGTGCCATTGTCCTGAGAGATGTTGGCACCCACCATGGGGAGAGAG----AAGGAGCCCCTGCTGTCAAGGGGCTCTGGGAGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACAATTTGTGCCCTGGGCAGGTGGGAGGTG-CCTTGGAGTTGGGTGTCTGGTTGGGGGCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96328941 240 + 96509753 CCCAGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCTGAGAAGGTGGCATTGTGGCCGGTGCCATTGTCCTGAGAGATGTTGGCACCCACCATGGGGAGAGAG----AAGGAGCCCCTGCTGTCAAGGGGCTCTGGGAGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACAATTTGTGCCCTGGGCAGGTGGGAGGTG-CCTTGGAGTTGGGTGTCTGGTTGGGGGCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16800167 240 - 16982598 CCCAGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCTGAGAAGGTGGCATTGTGGCCGGTGCCATTGTCCTGAGAGATGTTGGCACCCACCATGGGGAGAGAG----AAGGAGCCCCTGCTGTCAAGGGGCTCTGGGAGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACAATTTGTGCCCTGGGCAGGTGGGAGGTG-CCTTGGAGTTGGGTGTCTGGTTGGGGGCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3607540 240 - 3785965 CCCAGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCAGAGAAGGTGGCATTGTGGCCGGTGCCATTGTCCTGAGAGATGTTGGCACCCACCATGGGGAGAGAG----AAGGAGCCCCTGCTGTCAAGGGGCTCTGGGAGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACAATTTGTGCCCTGGGCAGGTGGGAGGTG-CCTTGGAGTTGGGTATCTGGTTGGGGGCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90230093 240 - 90373283 CCCAGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCAGAGAAGGTGGCATCGTGGCCGGTGCCATTGTCCTGAGAGATGTTGGCACCCACCGTGGGGAGAGAG----AAGGAGCCCCTGCTGTCAAGGGGCTCTGCGAGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTGGACAATTTGTGCCCTGGGCAGGTGGGAGGTG-CCTTGGAGTTGGGTATCTGGTTGCGGGCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 132248 240 + 156971 CCCAGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCAGAGAAGGTGGCATTGTGGCTGGTGCCATTGTCCTGAGAGATGTTGGCACCCACCATGGGGAGAGAG----AAGGAGCCCTTGCTGTCAAGGGGCTCTGGGAGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACAATTTGTGCCCTGGGCAGGTGGGAGGTG-CCTTGGAGTTGGGTATCTGGTTGGGGGCCTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5482167 240 - 5823884 CCCAGAGTACAC----------------------GGCGGGCAGGAGCACATAGAGGAACG---------GCAGCGGCTCAGAGAAGGTGGCATTGTGGCCGGTGCCATTGTCCTGAGAGATGTTGGAACCCATCTTGGGGAGAGAG----AAGGAGCCCCTGCTGTCAGGGAGCTCTGGGAGCCCAGCGGCCTGCATTGT-AGCTGGGACCGTTGACAATTTGTGCCCTGGGCAAGTGGGAGGTG-CCTTGGAGTTGGGTATCTGGTTGGGGGCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58133177 241 + 159171411 CCCGGAGTAAAC----------------------GGCGGGCAGGAGCACATAGAGGATGG---------GTAGCGGCTCGGAGAAGGTGGCATTGTGGCCGGTGCCATTGTCCTGACAGACGTTGGTACCCACTGTGGTGAGGGAG----GAAGCACCCCTGCTGTGAAGGGGCTCCAGACACCCAGTGGCCTGCATTGT-AGGCAGGACTGTTGACGGTTTGTGCCCCAGGCAGGTCGGGGGTGCCCTTGGAGTTGGGTGTCTGGTAAGAGGCTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16198903 240 + 16356641 CCCAGAGTACAC----------------------GGTGGGCAGGAGCACGTAGAGGATCG---------GTAGTGGCTCTGAGAAGGTGGCGTTGTGGCCGGTGCCATTGTCCTGAGAGACGTTGGCACCCGCTGTGGTGAGGGAG----GAGGCACCCCTGCTGTGAAGGGGCTCCAGACACCCAGCGGCCTGCATCGT-AGGTGGGACCGTTGACGGTTTGTGCCCCGGGCAGGTGGGGGGTG-CCTTGGAGTTGGGTGTCTGGTAAGAGGTCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1060050 240 + 1231380 CCCGGAGTACAC----------------------AGCAGGCAGGAGCACATAGAGGATCG---------GTAGCGGCTCGGAGAAGGTGGCATTGTGGCCAGTGCCATTGTCCTGAGAGACGTTGGCACCCAGTGGGGTGAGGGAG----GAGGCACCCCTGATGCGAAGGGGCTCCAGATACCCAGCGGCCTGCATTGT-AGGTAGGACTGTTGACAGTTTGTGCCCCGGGCAGGTGGGGGGTT-CCTTGGAGTTGGGTGTCTGGTAAGAGGCCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2598220 217 + 11732439 CCCGGAGTACAC----------------------GGCGGGGAGGAGCACATAGAGGATCG---------GCAGCGGCTCGGAGAAGGTGGCATTGTGGTCGGTGCCATTATCCTGAGAGACGTTGGCACCCACTGTGGTGAGGGAG----GAGGCAGCCCTGCTGTGAAGGGGCTCCGGACACCCAGTGGCCTGCATTGT-AGGTGGGACTG--------TTGTGCCCCGGGCAGGTGTGGGGTG----------------CCTGGTAAGAGGCCTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1784862 239 - 2029793 GGTGGAGTACAC----------------------CACCGGCAGGACCACGTAGAGGGCAG---------GCAGCGGCTCCGCGAAGGTGGCGTTGGGCCTGGTGCCGTTGTCCTGAGAGACGTTGGCGCCCGTCTCGGCAGGGAGG----AGGGGGCCTGTGCTGTCCAGGGGTTCCGGGCGCCCGGCGGCCTGCATCACGAGCTGGGACGGCTGAG-AGTTGTGCCCTGGGCAGGC-GGGGGTG-CCTCGGAGCCGGGAGTCCGGGCAGGGGCCTC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22765015 163 + 22939663 GGCAGAGTACAC----------------------TGACAGCAGGAGCACAGAGAGGGGA----------GCAGTGGCTCAGCAGGTGT--------------------------------CATTGGTGCCTGTCTC------------------------TGCTGTTGAATGGCT-TGAGTGCCCAGTGGCCTATATTGGGAGCTAGAGCCACATAG--TCTATGACTT---------GGGGGTG-TCTTGGAGCCAGGTGTCT------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181724800 237 + 182113224 CACAGAGTATCTATTGGCAGGATATGTTGGCAGGAGTTGGCAGGAACATGTGGAGCACAGTGGCTCCACATAGTGGCTCAGAGAAGGTGGCGTTGGGCTGGGTATTATTATCCTTGGACAAGTATGTGCTCGTGGTAGTGAGGAAGTTGTTAGTAACTTTAGCTGTTGGAGGACTCTGGGTACTCAGCAACCTGCATCAT-GGTAGG---------------------------------------GCTTAGAGACTGATATCTGGCCAGGGGCCTC i mm10.chr2 C 0 C 0 e canFam3.chr24 47540809 2 + 47698779 I e micMur3.chr18 56783793 680 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=314676.000000 s hg38.chr20_KI270870v1_alt 11855 25 + 183433 CTTGGGCTGGATTCTAGGAAAGAAA s panTro5.chr20 66344883 25 + 66533130 CTTGGGCTGGATTCTAGGAAAGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024052 25 + 62195757 CTTGGGCTGGATTCTAGGAAAGAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 413577 25 - 578057 CTTGGGCTGGATTCTAGGAAAGAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109938738 25 - 110113093 CTTGGGCTGGATTCTAGGAAGGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92666660 25 - 92844088 TTTGGGCTGGATTCTGGGAAAGAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329181 25 + 96509753 TTTGGGCTGGATTCTGGGAAAGAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16800407 25 - 16982598 CTTGGGCTGGATTCTGGGAAAGAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3607780 25 - 3785965 CTTGGGCTGGATTCTGGGAAAGAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90230333 25 - 90373283 CTTGGGCTGGATTCTGGGAAAGAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 132488 25 + 156971 CTTGGGCTGGATTCTGGGAAAGAAA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5482407 25 - 5823884 CTTGGGCTGGATTCTAGGAAAGAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58133418 25 + 159171411 CTCGCGCTGGATTCTAGGAAAGAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199143 25 + 16356641 CTTGGGCTGGATTCTAGGAAAGAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1060290 25 + 1231380 CTTGGGCTGGATTCTAGGAAAGAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2598437 25 + 11732439 CTTGGGCTGGATTCTAGGAAAGAAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1785101 25 - 2029793 CTTGGCCTGGATTCTGGGGAAGAAA i proCoq1.NW_012150197v1 C 0 I 445 s otoGar3.GL873542 22765178 19 + 22939663 -----CCAAGACACCTGGGAAAGA- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725037 22 + 182113224 CT-GGGCTGGTTTCTGGGAAAGA-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47540811 19 + 47698779 CTCGGGCTGGATCCTGAAA------ i canFam3.chr24 I 2 C 0 e micMur3.chr18 56783793 680 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=3922151.000000 s hg38.chr20_KI270870v1_alt 11880 417 + 183433 AACAACCAGAGACTTTGAGATCCGGCCGTCTGTTAGGGCA-CAGCCACTCCAGGTTCTCTGGCAGAGACTGC-GGCCACTTTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCCGCCTCTTCCTGGTGAG--ACTTCAGCAGATCAGTTCCCTCCTCCCGC-----AGAGAGCAGCTGCTGGCC--ACCCTCCTGGGAAGAG---ATGTGGAT-------CCGTCCCTGCCCCAGCAACCCGCAGATGCACGGGCTGCGTAGAATCAA-GCGGTCCC--------TTTGGAAACACACCTCCCAAGCTCATCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCC-TCAGGGGTCTTGGAGTCTGCACCCTCCCT-------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCTGGTCCAGCTACTCTT-- s panTro5.chr20 66344908 420 + 66533130 AACAACCAGAGACTTTGAGATCCGGCCGTCTGTTAGGGCA-CAGCCACTCCAGGTTCTCTGGCAGAGACTGC-GGCCACTTTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCCGCCTCTTCCTGGTGAG--ACTTCAGCAGATCAGTTCCCTCCTCCCGC-----AGAGAGCAGCTGCTGGCC--ACCCTCCTGGGAAGAGGAGATGTGGAT-------CCGTCCCTGCCCCAGCAACCCGCAGCTGCACGGGCTGCGTAGAATCAA-GCGGTGCC--------TTTGGAAACACACCTCCCAAGCTCATCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCC-TCAGGGGTCTTGGAGTCTGCACCCTCCCT-------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCTGGTCCAGCTACTCTT-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024077 420 + 62195757 AACAACGAGAGACTTTGAGATCCGGCCGTCTGTTAGGGCA-CAGCCACTCCAGGTTCTCTGGCAGAGACTGC-GGCCACTTTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCCGCCTCTTCCTGGTGAG--ACTTCAGCAGATCAGTTCCCTCCTCCCGC-----AGAGAGCAGCTGCTGGCC--ACCCTCCTGGGAAGAGGAGATGTGGAT-------CCGTCCCTGCCCCAGCAACCCGCAGCTGCACGGGCTGCGTAGAATCAA-GCGGTGCC--------TTTGGAAACACACCTCCCAAGCTCATCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCC-TCAGGGGTCTTGGAGTCTGCACCCTCCCT-------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCTGGTCCAGCTACTCTT-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 413602 420 - 578057 AACAACTGGAGACTTTGAGATCCGGCTGTCTGTTAGGGCA-CAGCCACTCCAAGTTCTCTGGCAGAGACTGC-GGCCACTTTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCCGCCTCTTCCTGGTGAG--ACTTCAGCAGATCAGTTCCCTCCTCCCGC-----AGAGAGCAGCTGCTGGCC--ACCCTCCTGGGAAGAGGGGATGTGGAT-------CCGTCCCTGCCCCAGCAACCCACAGATGCACGGGCTGCGTAGAATCAA-GCGGTGCC--------TTTGGAAACACACCTCCCAAGCTCATCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCC-TCAGGGGTCTTGGAGTCTGCACCCTCCCT-------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCTGGTCCAGCTACTCTT-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109938763 420 - 110113093 AACAGCCGGAGACGTTGAGATCCGGCCGTCTGTTAGGGCA-CAGCCACTCCAAGTTCTCTGGCAGAGACTGC-GGCCACTTTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GAAGCCCGGTGGGGTGTGTGGGGGCCTCCCCCCGCCTCTTCCTGGTGGT--ACTTTAGCAGATCAGTTCCCTCCTCCCGC-----AGAGAGCAGCTGCTGGCC--ACCCTCCTGGGAAGAGGAGACGTGGAT-------CCGTCTCTGCCCCAGCAACCCGCAAATGCACAGGCTAAGTAGAATCAA-GGGGTCCC--------TTTGGAAACACACCTCCCAAGCTCATCTCTGGCTCCC-TTGAATTCGAAGGTCCTTCCC-TCAGGGGTCTTGGAGGCTGCACCCTCCCT-------CACACCCTCCCGAGAGACGCTGCAGAC-CCTGCTGGTCCAGCTGCTCTT-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92666685 416 - 92844088 AACAACCAGAAACTTGGAGATCTGA-TGTCTGTTAGAGCA-CGGCCACTCCAAGTTCTCTGGCAGAGACGAC-GGCCACTCTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGAGCCTCCTCCTGCCTCTTCCTGGTGAT--ACTTTAGCAGATCAGTTCCCTTCTCCCGC-----AGACAG-AGCTGCTGGCT---CTCCCCTGGGAAGGGGAGACGTGGAT-------CTGCCCCTGCCCCAGCAACCCGCAAATGCACAGGCTAAGTAGACTCAA-GAGGTCCC--------TTTGAAAACACAACTCCCAAGCTCGTCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCT-TCAGGGGTCTTGGAGTCTGCACCCTCCC--------CACACCCCCCCGAGAGATGCTGCAGAC-CCTGCTGGTGCAGCTACTCTT-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329206 416 + 96509753 AACAACCAGAAACTTGGAGATCTGA-TGTCTGTTAGAGCA-CGGCCACTCCAAGTTCTCTGGCAGAGACGAC-GGCCACTCTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCTGCCTCTTCCTGGTGAT--ACTTTAGCAGATCAGTTCCCTTCTCCCGC-----AGACAG-AGCTGCTGGCT---CTCCCCTGGGAAGGGGAGACGTGGAT-------CTGCCCCTGCCCCAGCAACCCGCAAATGCACAGGCTAAGTAGACTCAA-GAGGTCCC--------TTTGAAAACACAACTCCCAAGCTCGTCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCC-TCAGGGGTCTTGGAGTCTGCACCCTCCC--------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCTGGTGCAGCTACTCTT-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16800432 416 - 16982598 AACAACCAGAAACTTGGAGATCTGA-TGTCTGTTAGAGCA-CGGCCACTCCAAGTTCTCTGGCAGAGACGAC-GGCCACTCTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCTGCCTCTTCCTGGTGAT--ACTTTAGCAGATCAGTTCCCTTCTCCCGC-----AGAGAG-AGCTGCTGGCT---CTCCCCTGGGAAGGGGAGACGTGGAT-------CTGCCCCTGCCCCAGCAACCCGCAAATGCACAGGCTAAGTAGACTCAA-GAGGTCCC--------TTTGAAAACACACCTCCCAAGCTCGTCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCC-TCAGGGGTCTTGGAGTCTGCACCCTCCC--------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCTGGTGCAGCTACTCTT-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3607805 416 - 3785965 AACAACCAGAAACTTGGAGATCTGA-TGTCTGTTAGAGCA-CGGCCACTCCAAGTTCTCTGGCAGAGACGAC-GGCCACTCTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCTGCCTCTTCCGGGTGAT--ACTTTAGCAGATCAGTTCCCTTCTCCCGC-----AGAGAG-AGCTGCTGGCT---CTCCCCTGGGAAGGGGAGACATGGAT-------CTGCCCCTGCCCCAGCAACCCGCAAATGCACAGGCTAAGTAGACTCAA-GAGGTCCC--------TTTGAAAACACACCTCCCAAGCTCGTCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCC-TCAGGGGTCTTGGAGTCTGCACCCTCCC--------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCTGGTGCAGCTACTCTT-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90230358 417 - 90373283 AACAACCAGAAACTTGGAGATCTGA-TGTCTGTTAGAGCA-CGGCCACTCCAAGTTCTCTGGCAGAGACGAC-GGCCACTCTGCCAGGTCAAGGAC----------------------------ATGGGGTCAAAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCTGCCTCTTCCTGGTGAT--ACTTTAGTAGATCGGTTCCCTTCTCCCGC-----AGAGAG-AGCTGCTGGCC--ACCCTCCTGGGAAGAGGAGACGTGGAT-------CTGCCCCTGCCCCAGCAACCCACAAATGCACAGGCTCAGTGGACTCAA-GAGGTCCC--------TTTGAAAACATACCTCCCAAGCTCGTCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCC-TCAGGGGTCTTGGAGTCTGCACCCTCCC--------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCTGGTGCAGCTACTCTT-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 132513 416 + 156971 AGCAACCAGAAACTTGGAGATCTGA-TGTCTGTTAGAGCA-CGGCCACTCCAAGTTCTCTGGCAGAGACGAC-GGCCACTCTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCTGCCTCTTCCTGGTGAT--ACTTTAGCAGATCAGTTCCCTTCTCCCGC-----AGAGAG-AGCTGCTGGCT---CTCCCCTGGGAAGGGGAGACGTGGAT-------CTGCCCCTGCCCCAGCAACCCGCAAATGCACAGGCTAAGTAGACTCAA-GAGGTCCC--------TTTGAAAACACACCTCCCAAGCTCGTCTCTGGCTCCC-TTGAATCTGAAGGTCCTTCCC-TCAGGGGTCTTGGAGTCTGCACCCTCCC--------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCTGGTGCAGCTACTCTT-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5482432 418 - 5823884 GACAACCAGAAACTTTGAGACCTGGCTGTCTGTTAGAGCA-TGGCCACTCCAAGTTCTCTGGCAGAGACGGC-GGCCACTTTGCCAGGTCAAGGAC----------------------------ATGGGGCCAGAG------GGAGCCTGGTGGGGTGTGTGGGGGCCTCCTCCTGCCTCTTCCTGGTGAT--ACTTTAGCAGATCCGTTCCCTTCTCCCGT-----AGAGAG-AGCTGCTGGCC--AGCCTCCTGGGAAGAGGAGACGTGGAT-------CTGCCCCTGCCCCAGCAACCCGCAAATGCACAGGCTAAGTAGACTCAA-GAGGTCCC--------TTTGAAAACGCACCTCCCAAGCTCGTCTCTGGCTCCC-TTGAATCTGAAGGTCTCTCCC-TCAGGGGTCGTGGAGTCTGCACCCTCCCT-------CACACCCTCCCGAGAGATGCTGCAGAC-CCTGCCGGTGCAGCTACT-TT-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58133443 423 + 159171411 ATCAGCCAGAAACTTTGAGATCTGGCCATCTGTTAGAGCA-CAGCCGCTCCAAGTTCTCTGGCCGAGACTGTGGGCCACTTTGCCAGGTCAAGTGC----------------------------CTGGGGCCAGAGGCAGCTGCAGCCAGGTGGAATGTGTGAGGGCCTCCCCCAGCCTCCTCCTAATGAT--GCTTCAGCAGGTCCATTCCCTCCTCCTGC-----AGAGAGGGGCTGCTGGCC--ACCCTCCTGGGAAGAGGCGATGTGGCT-------CTGCCCCTGCCCCAGGAACCTGCAAATTCACAGTCTAAGTAGAATCCA-GCGATCCA--------TTTGAAAACAC--CTCCC-AGCTCATCTGTGGTCCCC-TTGAATCTGAAGCTCCTCCCC-ACAGGGGTCTTGGGGTTGGCACCCTCCCT-------CCCAGCCTCCT-AGAGGTGCTGCAGAC-CCCGCTGGTCCACTTGCTTTT-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199168 421 + 16356641 ATCAACCAGAAACTTTGAGATCTGGCCGTCTGTTAGAGCA-CAGCCGCTCCAAGTTCTCTGGCGAAGACGGTGGGCCACTTTGCCAGGTCAAGTGC----------------------------CTGGGGCCAGAGGGAGCTGGAGCCAGGTGGAGTGTGTGGGGGCCTCCCCCAGCCTCCTCCCGGTGAT--GCTTCGGCAGGTCAGTTCCCTCCTCCCGC-----AGAGAGGGGCTGCTGGCC--ACCCTCCTGGGAAGAGGAGATGTGGTT-------CTGCCCCTGCCCCAGCAACCTGCAAA--CGCAGTCTAAGTACAATCAA-GCAATCCC--------TTTGAAAACAC--CTCCC-AGCTCATCTCTGGTCCCC-TTGAATCTGAAGCTCCTCACT-CCAGGGGTCTTGGAGTTGGCACCCTCCCT-------CCCAACCTCCT-AGAGGTGCTGCAGAC-CCCGCTGGCCCACCTGCTTTT-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1060315 423 + 1231380 ATCAACCAGAAATTTTGAGATCTGGCCGTCTGTTAGAGCA-CAGCCGCTCCAAGTTCTCTGGCTGAGACTGTGGGCCACTTTGCCAGGTCAAGTGC----------------------------CTGGGGCCAGAGGGAGCCGGAGCCAGGTGGAGTGTGTCAGGGCCTCCCCCAGCCTCCTCCTGGTGAT--GCCTCAGCAGGTCAGTTCCCTCCTCCCAC-----AGAGAGGGGCTGCTGGCC--ACCCTCCTGGGAAGAGGAGATGTGGCT-------CTGCCCGTGCCCCAGCAGCCTGCACACACACAGTCTAGGTAGAACCAA-GTGATCCC--------TTCAAAAACAC--CTCCC-AGCTCATCTCTGGTCCCC-TTGAATCTGAAGCTCCTCCCT-CCAGGGGTCTTGGAGTCGGCACCCTCCCT-------CCCAACCTCCT-AGAGGTGCTGCAGAC-CCCGCTGGCCCACCTGCTCTT-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2598462 423 + 11732439 ATCCACCCGAAACTTTGAGATCTGGCCGTCTGTTAGAGCA-CAGCCGCTCCAAGTTCTCTGACAGAGACTGTGGGCCACTTTGCCAGGTCAAGTGC----------------------------CTGGGGCCAGAAGGAGCTGGAGCCAGGTGGAGTGTGTGAGGGCCTCCCCCCGCCTCCTCCTGGTGAT--GCTTTGGCAGGTCAGTTCCCTCCTCCCGC-----AGAGAGGGGCTGCTGGCC--GCCCTCCAGGGAAGAGGGGGTGTGGCT-------CTGCCCCTGCCCCAGCAACCTACAAACGCACAGTCTAAGTAGAATCAA-GCGATCCC--------TTTGAAAACAC--CTCCC-AGCTTGTCTCTGGTCCCC-TTGAATCTGAAGCTCCTCCCT-CCAGGGGTCTTGGAGTTGGTACCCTCCCT-------CCCAACCTCCT-CGAGGTGCTGCAGAG-CCCGCTGGTCCACCTGCTCTT-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22765197 450 + 22939663 AACAATCAGAAACTTTGGGATCTGT-----GGTCACAATAGTGGCCACCTTAAATTCTCTGGCAGAGCTTGT-GGCCACTTTGCCAGGGCAAGGACTCACAGGCTTGCACCGTCCAATCTGGTTCTGGGGCCAGAG------GGAGCCTGGAGGGACATGTGGGGGCATCTTCCAGCTTCCTCCTGGGGGGCACTTTTGGTGCATCAGTG--CTTCTCCCCA-----AACTCACTCCTGCTGATCACATCTTCTTGGGAGCAAGAGACATGAATGTGCCCACTGCCCCTGCCCTAGCAGCCCTTGAA-GTGCAATCTAAGCAAAACTAAGGCAGTTTC--------CTGGTAAATGTGCCTCCTGGATGCATTTCT-GCTCCT-TTGACCCCAACTG-CCTTCTT-CCTAATGTCTCAGAGTGCGTGCCCTCCC--------AGCACTCTTCCTGCTGGTGATGCAAAC-CTTTCCTGCTAATCTGCTTTT-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725059 365 + 182113224 AACAGTCAGAAA------------------TGCTACAACAGTGGCCACCTCAACTTCTCTGA-----------GGCCATTCTATTTACCCTAGC-C----------------------------CTTGGGTAGGAG------AGAGCCTGGTGGGGCA----GAGTTCTCCTTCAGATTCCT-----GGAT--------GTAGCCCCATTTCCAGGTTCTGCTCATATGAGAGCAGATGC-------ACCCCTGGGATACTAAGTGACCCAGAG-------CAACCCC--ACCTACCACCC--CCAATGTACAA--TAAGTGGAAGGAA-GCAGTGCTGTTGCCTATTTGTAGATGCACCCTTTAGATGCTTTACTGGATACT-TTAGATCTAAATGTTCTTCCCTTCAGGAGTC---AAGTT-------------------CTCATTCTCCATAGTGCTG-TGTAAACATCTGCTTTCCTAGGTATTTCA-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47540830 261 + 47698779 AGTGACAAGAG---TCGGGA----------TGTTAGAGCA-GCGGCGCCTCGAGTTCTCTGGCAGAGGCCGT-GACCATTTGCCAGGGTTGAGGAC----------------------------A--------------------------------------------------------------------------------------------CCCGG-------------------------GCTCTCC-----------------GTT-------CCGCCCCCAAC-------CCCGCCCGTGCATAGTGCACGTGGGATCAAAGCTGTGCC--------TTTGCAAACAC-CCTCCCTGGCTCACCT---GCTCCCGTCGGAT----------------CTGGGGGTGCTGAAGCCGGAGCCCTCCCTGCCGCAGCGCACAC------------CTGCAGGG-CTCCCTGCTGCCTCCGCACTCAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1785126 445 - 2029793 I e micMur3.chr18 56783793 680 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=54613.000000 s hg38.chr20_KI270870v1_alt 12297 4 + 183433 CTCT-- s panTro5.chr20 66345328 4 + 66533130 CTCT-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024497 4 + 62195757 CTCT-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414022 4 - 578057 CTCT-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939183 4 - 110113093 CTCT-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667101 4 - 92844088 CTCT-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329622 4 + 96509753 CTCT-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16800848 4 - 16982598 CTCT-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608221 4 - 3785965 CTCT-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90230775 4 - 90373283 CTCT-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 132929 4 + 156971 CTCT-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5482850 4 - 5823884 CTCT-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58133866 4 + 159171411 CTCT-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199589 4 + 16356641 CTCT-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1060738 4 + 1231380 CTCT-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2598885 4 + 11732439 CTCT-- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1785571 4 - 2029793 CTCT-- i proCoq1.NW_012150197v1 I 445 C 0 s otoGar3.GL873542 22765647 4 + 22939663 CTCT-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725424 2 + 182113224 --CT-- i mm10.chr2 C 0 I 2 s canFam3.chr24 47541091 4 + 47698779 --CTGC i canFam3.chr24 C 0 C 0 e micMur3.chr18 56783793 680 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=688657.000000 s hg38.chr20_KI270870v1_alt 12301 50 + 183433 CCACTGACCTGTCCAGTGCTTCGAGTCCAGAAGTTGGTAGCCTTGGTGTG s panTro5.chr20 66345332 50 + 66533130 CCACTGACCTGTCCAGTGCTTCGAGTCCAGAAGTTGGTAGCCTTGGTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024501 50 + 62195757 CCACTGACCTGTCCAGTGCTTCGAGTCCAGAAGTTGGTAGCCTTGGTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414026 50 - 578057 CCACTGACCTGTCCAGTGCTTCGAGTCCAGAAGTTGGTAGCCTTGGTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939187 50 - 110113093 CCACTGACCTGTGCAGTGCTTCGAGTCCAGAAGTTGGTAGCCTTGGTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667105 49 - 92844088 CCACTGACCTGTGCAGTGCTTCAAGTCCAGAAGTTGGCAG-CTTGGTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329626 49 + 96509753 CCACTGACCTGTGCAGTGCTTCAAGTCCAGAAGTTGGCAG-CTTGGTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16800852 50 - 16982598 CCACTGACCTGTGCAGTGCTTCAAGTCCAGAAGTTGGCAGCCTTGGTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608225 50 - 3785965 CCACTGACCTGTGCAGTGCTTCAAGTCCAGAAGTTGGCAGCCTTGGTGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90230779 50 - 90373283 CCACTGACCTGTGCAGTGCTTCAAGTCCAGAAGTTGGCAGCCATGGTGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 132933 50 + 156971 CCACTGACCTGTGCAGTGCTTCAAGTCCAGAAGTTGGCAGCCTTGGTGTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5482854 50 - 5823884 CCACTGACCTGTGCAGTGTTTCAAGTCCAGAAGTTGGCAGCCATGGTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58133870 50 + 159171411 CTACTGACCTGTCCAGTGCTTCGAGCCCGGAAGTTGGTAGCCTTGGTGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199593 50 + 16356641 CTACTGACCTGTCCAGGGCGTCGAGCCCGGAATTTGGTAGCTTTGGTGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1060742 49 + 1231380 TTACTGACCTGGCCAGGGCTTCGAGCCCAG-AGTTGGTAGCCTTGGTGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2598889 50 + 11732439 CTACTGACCTGCCCAGTGCTTCGAGCCTGGAAGTCGGTAGCCTTGGTGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56784473 50 + 57149010 CCACTGACCTGTCCTGTGCTTCGTGGCCAGAAGTTGGTGGCCTTGGTGTG i micMur3.chr18 I 680 I 226 s proCoq1.NW_012150197v1 1785575 50 - 2029793 CCACTGACCTGTCCGGTGCTTCGTGGCCAGAAGTTGGTGGTCTTCGTGTG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22765651 48 + 22939663 CCACTGACCTGTCCTATGCTTTGTGACCAGAAGTTGGTGGCCTTGGTG-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725428 50 + 182113224 CCTGTCCTCTGTCCAGTGCCTTGTAGCTGGAAGATGATGGCCTTGGTGGG i mm10.chr2 I 2 C 0 s canFam3.chr24 47541095 46 + 47698779 CCGATGACATG----ATGACACGTGGCCGGAAGTTGGTGGCCCAGTTGGG i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 181591 572 - 397369 I a score=74371.000000 s hg38.chr20_KI270870v1_alt 12351 7 + 183433 TTCCTGG-- s panTro5.chr20 66345382 7 + 66533130 TTCCTGG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024551 7 + 62195757 TTCCTGG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414076 7 - 578057 CTCCTGG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939237 7 - 110113093 TTCCTGG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667154 7 - 92844088 CTCCTGG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329675 7 + 96509753 CTCCTGG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16800902 7 - 16982598 CTCCTGG-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608275 7 - 3785965 CTCCTGG-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90230829 7 - 90373283 TTCCTGG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 132983 7 + 156971 CTCCTGG-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5482904 7 - 5823884 TTCCTGT-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58133920 7 + 159171411 GTCCTGG-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199643 7 + 16356641 TTCCTGG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1060791 7 + 1231380 TTCCTGG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2598939 7 + 11732439 TTCCTGG-- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1785625 7 - 2029793 CTCTTGG-- i proCoq1.NW_012150197v1 C 0 I 195 s otoGar3.GL873542 22765699 5 + 22939663 --CCAAG-- i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181725478 7 + 182113224 CTCTCAG-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47541141 7 + 47698779 --CGTGGGA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56784523 226 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=1508947.000000 s hg38.chr20_KI270870v1_alt 12358 159 + 183433 TTTTGGCCAGTACAGGCAGTCGCAGGGATGGAGGGCGAGGTGTGGTCCTCACTGACAGACCTCCAGCTGAGGTTTCAG------------------------GAGTTTCAAGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-TGCGAGGTTCCCAGCCTGGTGTCAGTG------CTG---ATGCTGGTGAG s panTro5.chr20 66345389 159 + 66533130 TTTTGGCCAGTACAGGCAGTCGCAGGGATGGAGGGCGAGGTGCGGTCCTCACTGACAGACCTCCAGCTGAGGTTTCAG------------------------GAGTTTCAAGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-TGCGAGGTTCCCAGCCTGGTGTCGGTG------CTG---ATGCTGGTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024558 159 + 62195757 TTTTGGCCAGTACAGGCAGTCGCAGGGATGGAGGGTGAGGTGCGGTCCTCACTGACAGACCTCCAGCTGAGGTTTCAG------------------------GAGTTTCAAGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-TGCGAGGTTCCCAGCCTGGTGTCGGTG------CTG---ATGCTGGTGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414083 159 - 578057 TTTTGGCCAGTACAGGCAGTCGCAGGGATGGAGGACGAGGTGTGGTCCTCACTGACAGACCTCCAGCTGAGGTTTCAG------------------------GAGTTTCAAGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-TGCGAGGTTCCCAGCCTGGTGTCAGTG------CTG---ATGCTGGTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939244 159 - 110113093 TTTTGGCCAGCACAGGCAGTCGCAGGGATGGAGGGCGAGGTGTGGTCCTCACTGACAGACCTCCAGCTGAGGTTTCAG------------------------GAGTTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCGCCGAC-TGTGAGGTTCCCAGCCTGGTGTCAGTG------CTG---ATGCTGGTGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667161 159 - 92844088 TTTTGGCCAGTACAGGCAGTCGCGGGGATGGAGCGGGAGGTGTGGTCCTCGCCCACAGACTTCCCGCTGAGGTTTCAG------------------------CACCTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-GGTGAGGTTCCCAGCCTGGTGCCTGTG------CTG---ATGCTGGTGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329682 159 + 96509753 TTTTGGCCGGTACAGGCAGTCGCGGGGATGGAGCGGGAGGTGTGGTCCTCGCCCACAGACTTCCCGCTGAGGTTTCAG------------------------CACCTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-GGTGAGGTTCCCAGCCTGGTGCCTGTG------CTG---ATGCTGGTGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16800909 159 - 16982598 TTTTGGCCAGTACAGGCAGTCGTGGGGATGGAGCGGGAGGTGTGGTCCTCGCCCACAGACTTCCCGCTGAGGTTTCAG------------------------CACCTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-GGTGAGGTTCCCAGCCTGGTGCCTGTG------CTG---ATGCTGGTGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608282 159 - 3785965 TTTTGGCCAGTACAGGCAGTCGCGGGGATGGAGCGGGAGGTGTGGTCCTCGCCCACAGACCTCCCGCTGAGGTTTCAG------------------------CACTTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-GGTGAGGTTCCCAGCCTGGTGCCTGTG------CTG---ATGCTGGTGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90230836 159 - 90373283 TTTTGGCCAGTACAGGCAGTCGCGGGGATGGAGGGTGAGGTGTGGTCCTCACCCACAGACCTCCTGCTGAGGTTTCAG------------------------CACTTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-GGTGAGGTTCCCAGCCTGGTGCCTGTG------CTG---ATGCTGGTGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 132990 159 + 156971 TTTTGGCCAGTACAGGCAGTCGCGGGGATGGAGCGGGAGGTGTGGTCCTCGCCCACAGACCTCCCGCTGAGGTTTCAG------------------------CACTTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGC-GGTGAGGTTCCCAGCCTGGTGCCTGTG------CTG---ATGCTGGTGAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5482911 149 - 5823884 TTTTGGCCAGTGCAGGCAGTCGCGGG----------GAGGTATGGTCCTCACTCACAGACCTCCCGCTGAGGTTTCAG------------------------CACTTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCAGCCCCGGT-GGTGAGGTTCGCAGCCTGGTGCCTGTG------CTG---ATGCTGGTGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58133927 156 + 159171411 TGGTGGCCAGCACAGTCAGTTGCAGGGAT--GGGGGGAGGTGTGGTCCTCACCAACAGACC-CCAGCTGAGGTTTCAG------------------------GAGTTTCAGGACCTGC---CTTGCTGG----------------------------CTGCCTCGGTCCCGGA-GGCAAGGATCCCAGCCTGGTGGCAGCG------CTG---ATGCTGGTGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199650 158 + 16356641 TGGCGGCCAGTACAGGCAGTTGCAGGGATCGGGGGGGAGGTGTGGTCCTCACCAGCAGACC-CCAGCTGAGGTTTCAG------------------------GAGTTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCGGCCCTGGA-GGCAAGGTTCCCAGCCCGGTGGCAGCG------CTG---ATGCTGGTGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1060798 157 + 1231380 TGGTGGCCAGTACAGGCAGTTGCAGGGAT-GGGGGGGAGGTGTGCTCCTCACCAGCAGACC-CCACCTGAGATTTCAG------------------------GAGTTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCGGCCCTGGA-GGCAAGGTTCCCAGCCTGGTGGCAGCG------CTG---ATGCTGGTGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2598946 155 + 11732439 TGGTGGCCAGTACAGGCAGTTGCAGGGAT---GGGGGGGGTGTAGTCCTCACCAGCAGACC-CCAGCTGAGGTTTCAG------------------------GAGTTTCAGGACCTGC---CCTGCTGG----------------------------CTGCCTCGGCCCCGGA-GGCAGGGTTCCCAGCCCGGTGGCGGCG------CTG---ATGCTGGTGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22765707 171 + 22939663 CAGTGGCTAGAGTAGGCAGTGTCAGGGGTGGAGGG-GAGGTATGGCCCTTACTGACAGATC-CCAGCCGAGGTCTCAG-----------------------------------CCTGT---GCTGCTAGATAGGGAAACAGGGGGCCCTTTTAGGACCTGCCTGAGCCTCAGC-T---AGCTTCCCTGTAAGAGTCCAGTG------CTATGTGTGTTGAT--- i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181725485 160 + 182113224 --------TGTATAGGTGGCTGT-GAGATGAAG-----GGTGTGACTCCTTT-------CTTTCAGCAGAGGTTTCAGCCAGTCTTGGTCAGCTAGGAGGGTGGTTTCCAAGACCCACTTGCATTCCTG----------------------------CTACCTCAGTCT------GTTGGCTTCCCAGCCTAGGCCTGGTC------ATA---ACACAAATGAG i mm10.chr2 C 0 I 13 s canFam3.chr24 47541148 150 + 47698779 AGGAGGCTGGGGTGGGCTGCAGCAGGGGTGGAGGAGGCAGCA-GGTGCTCTCC-------------CTGGGGCCCCAG-----------------------GGGGCTTAAGGGCCTGC-----GGGCAG----------------------------CATCCTCAGCGTGAGCTGGCGAGGCGTCCAGCCTGGCGGCAGCAGCACCCCCA---ACACCACAAA- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1785632 195 - 2029793 I e micMur3.chr18 56784523 226 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=499498.000000 s hg38.chr20_KI270870v1_alt 12517 36 + 183433 GGAGGGAGGCGGATCCCCCTTGCTGACGTGGAGCCC s panTro5.chr20 66345548 36 + 66533130 GGAGGGAGGCGGATCCCCCTTGCTGACGTGGAGCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024717 36 + 62195757 GGAGGGAGGCGGATCCCCCTTGCTGACGTGGAGCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414242 36 - 578057 GGAGGGAGGCGGATCCCCCTTGCTGACGTGGAGCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939403 36 - 110113093 GGAGGGAGGCGGATCCCCCTTGCTGACGTGGAGCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667320 36 - 92844088 GGAGGGGGGCGGATCCCCCTCGCTGACGTGGAGCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329841 36 + 96509753 GGAGGGGGGCGGATCCCCCTCGCTGACGTGGAGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801068 36 - 16982598 GGAGGGGGGCGGATCCCCCTCGCTGACGTGGAGCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608441 36 - 3785965 GGAGGGAGGCGGATCCCCCTCGCTGACGTGGAGCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90230995 36 - 90373283 GGAGGGAGGCGGATCCCCCTCGCTGACGTGGAGCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 133149 36 + 156971 GGAGGGAGGCGGATCCCCCTCGCTGACGTGGAGCCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483060 36 - 5823884 GGAGGGAGGCGGATCCCCCTCGCTGACGTGGAGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134083 36 + 159171411 GGAGGGAGGCGGATCCCCCACGCTGACGTGGAGCCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199808 36 + 16356641 GGAGGGAGGCGGATCCCCCACGCTGACGTGGAACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1060955 36 + 1231380 GGAGGGAGGCGGATCCCCCACGCTGACGTGGAGCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599101 36 + 11732439 GGAGGGAGGCGGATCCCCCACGCTGACGTGGAGCCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1785827 36 - 2029793 GGAGGGAGGCGGGTCCCGCTTGCTGACGCGGAGCCC i proCoq1.NW_012150197v1 I 195 I 29 s otoGar3.GL873542 22765878 36 + 22939663 GGAGGGAGGCAGGTCCCACCTGCTAACGTGCAGCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725658 36 + 182113224 GGAGAAAGCTGGGTGCTACTGTTTGACTGAAGGTCC i mm10.chr2 I 13 I 1 s canFam3.chr24 47541298 34 + 47698779 GCAGGGAGGCAGGTCCCAGTGG-TGA-GGGGAGCGC i canFam3.chr24 C 0 C 0 e micMur3.chr18 56784523 226 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=241950.000000 s hg38.chr20_KI270870v1_alt 12553 26 + 183433 GGAAGGCAGGCCCCACCTTCCC---------CTGA s panTro5.chr20 66345584 26 + 66533130 GGAAGGCAGGCCCCACCTTCCC---------CTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024753 26 + 62195757 GGAAGGCAGGCCCCACCTTCCC---------CTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414278 26 - 578057 GGAAGGCAGGCCCCACCTTCCC---------CTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939439 26 - 110113093 GGAAGGCAGGCCCCACCTTCCC---------CTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667356 26 - 92844088 GGAAGGCAGGCCCCACCTTCCC---------CTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329877 26 + 96509753 GGAAGGCAGGCCCCACCTTCCC---------CTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801104 26 - 16982598 GGAAGGCAGGCCCCACCTTCCC---------CTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608477 26 - 3785965 GGAAGGCAGGCCCCACCTTCCC---------CTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90231031 26 - 90373283 GGAAGGCAGGCCCCACCTTCCC---------CTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 133185 26 + 156971 GGAAGGCAGGCCCCACCTTCCC---------CTGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483096 26 - 5823884 GGAAGGCAGGCCCCACCTTCCC---------CTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134119 22 + 159171411 GGAAGGCAGG----CCCCACCC---------CTGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199844 26 + 16356641 GGAAGGCAGGGCCCCCCTTCCC---------CTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1060991 26 + 1231380 GGAAGGCGGGCCCCCCCTTCCC---------CTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599137 24 + 11732439 GGAAGGCAGG--CCCCCCTTCC---------CTGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22765914 24 + 22939663 AGGAGGCAGGGGTGTCCTCACA---------GC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725695 35 + 182113224 GGAAGCAAGCACCCCCCTTCCCCACCCAGTGCTGA i mm10.chr2 I 1 C 0 s canFam3.chr24 47541332 6 + 47698779 ----GTCGGG------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1785863 29 - 2029793 I e micMur3.chr18 56784523 226 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=865142.000000 s hg38.chr20_KI270870v1_alt 12579 73 + 183433 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCATTC-----------ACTTACCCAGGCAGACTCCTCAGTG s panTro5.chr20 66345610 73 + 66533130 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCATTC-----------ACTTACCCAGGCAGACTCCTCAGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024779 73 + 62195757 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCATTC-----------ACTTACCCAGGCAGACTCCTCAGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414304 73 - 578057 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCATTC-----------ACTTATCCAGGCAGACTCCTCAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939465 73 - 110113093 GCT--GCAGTAGCGCCTGCAGTGGG---------------------------------CTGTCCCGGGGTCTCC-----------------------TCAGCACTC-----------ACTTACCCAGGCAGACTCCTCAGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667382 73 - 92844088 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCACTC-----------ACTTACCCAGGCAGACTCCTCAGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329903 73 + 96509753 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCACTC-----------ACTTACCCAGGCAGACTCCTCAGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801130 73 - 16982598 GCT--GCAGTAGTGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCACTC-----------ACTTACCCAGGCAGACTCCTCAGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608503 73 - 3785965 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCACTC-----------ACTTACCCAGGCAGACTCCTCAGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90231057 73 - 90373283 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCACTC-----------ACTCACCCAGGCAGACTCCTCAGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 133211 73 + 156971 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCAGCACTC-----------ACTTACCCAGGCAGACTCCTCAGTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483122 73 - 5823884 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TTAGCACTC-----------ACTTACCTAGGCAGACTCCTCAGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134141 69 + 159171411 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------TTGTCCCAGGGTCTCC-----------------------TCAGCACTC---------------ACCCAGGCGAACTCCTCAGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199870 47 + 16356641 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGT------------------------------------------------------------CCCAGGCGAACTCCTCAGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061017 69 + 1231380 GCT--GCAGTGGCGCCTGCAGTCGG---------------------------------CTGT-CCCAGGTCTCC-----------------------TCAGCACTC-----------ACTTACCCAGGAGAA---CTCAGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599161 73 + 11732439 GCT--GCAGTAGCGCCTGCAGTCGG---------------------------------CTGTCCCAGGGTCTCC-----------------------TCGGCGCTC-----------ACTCACCCAGGCGCACTCCTCAGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56784749 73 + 57149010 GCT--GCAGTGGCGCCTGCCACTGG---------------------------------CTGTCCCAGGGTCCCC-----------------------GCAGCACTC-----------ACTCACCCAGGCGGACGCCCCAGTG i micMur3.chr18 I 226 I 28 s proCoq1.NW_012150197v1 1785892 66 - 2029793 GCT--GCAGTGGCGCCTGCCGTTGG---------------------------------CTGTCCCAGGGTCCC------------------------------CTC-----------ACTCGCCCAGGCGGACTCCCCAGTG i proCoq1.NW_012150197v1 I 29 C 0 s otoGar3.GL873542 22765938 73 + 22939663 ACT--GAAGTGGCATCTAAACTTGG---------------------------------CTGTTCCAGGGCTTTC-----------------------TCGGTGCTC-----------TCTAGCCCAAGCAGACTCCCCAGTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725730 136 + 182113224 ACT--ACAGT---GCCTGCAGTTGGTGGTCTGGGATTCCATCCCCATGCTCTTTGTACCTGCTCCACCATCCCCTGTGTGTGTGTGTGTGTGTTATGTTAGTATTTTGCTTGTTATTAATCACTCAGATAAG-TCACAAATG i mm10.chr2 C 0 C 0 s canFam3.chr24 47541338 51 + 47698779 GCTGGGCAGGGGCGCCTGCAGTCAT---------------------------------C---CACAGGG---CG-----------------------GGGGCATGC----------------TCCAGGG------------- i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 181591 572 - 397369 I a score=721209.000000 s hg38.chr20_KI270870v1_alt 12652 64 + 183433 GGCGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGGACTCCATGCAGGGGCCTCTGGGTGT s panTro5.chr20 66345683 63 + 66533130 GGCGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGGA-TCCATGCAGGGGCCTCTGGGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024852 63 + 62195757 GGCGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGGA-TCCATGCAGGGGCCTCTGGGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414377 64 - 578057 GGCGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGGACTCCATGCAGGGGCCTCTGGGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939538 64 - 110113093 GGTGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGCACTCCACGCAGGGGCCTCTGGGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667455 64 - 92844088 GGCGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGCACTCCATACAGGGGCCTCTGGGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96329976 64 + 96509753 GGCGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGCACTCCATACAGGGGCCTCTGGGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801203 64 - 16982598 GGCGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGCACTCCATACAGGGGCCTCTGGGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608576 64 - 3785965 GGCGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGCACTCCATACAAGGGCCTCTGGGTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90231130 64 - 90373283 GGCGGCTGAGGCA------------------------CGTGTGTGCCTGTGTGTCAGGAAGGCACTCCATACAGGGGCCTCTGGGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 133284 64 + 156971 GGCGGCTGAGGCA------------------------CGTGTGCGCCTGTGTATCAGGAAGGCACTCCATACAGGGGCCTCTGGGTGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483195 64 - 5823884 GGTGGCTGAGGCA------------------------CGTGTGCGCCTGTGTGTCAGGAAGGCACTCCATACAGGGGCCTCTGGGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134210 86 + 159171411 GGCGGCCGAGGCACGTGTGCGTGT--CTGTCTGTGCATGTGTGCACCTGTGTGTCAGGAAGGCACTCCATGCAGGGGCCTCCAGGTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199917 80 + 16356641 GGTGGCCAAGGCA------CGTGT--CTGCCTGTGCGTGTGTGCGCCTGTGTGTCAGGAAGGCACTCCATGCAGGGGCCTGCGGGTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061086 80 + 1231380 GGCGGCTGAGGCA------CGTGT--CTGCCTGTGGATGTGTGCGCCTGTGCGTCAGGAAGGCACTCCATGCAGGGGCCTCTGGGTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599234 85 + 11732439 GGCGGC-GAGGCACGTGTGCATGT--CTGCCTGTGCATGTGTGCGCCTGTGTGTCAGGAAGGCACTCCGTGCAGAGGCCTCTGGGTGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1785958 81 - 2029793 GGCGGCTGAGGTG------CGTGT-CGGGTCTGTGCACGTGTGTGCACGTGTGTCAGGAAGGCATGCCGTGCAGGGGCCCCTGCTTGT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22766011 82 + 22939663 GGCCACTGTGGTA------TGTGTACCTGTCTGTGCATGTGTATGCCTGTGTATCACGAGGGCACACTGTGCAGGGGCCTCTGGTTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725866 73 + 182113224 GGTAGCTGAGAGA------TGTGTTTTTGTTCA----TGTGTGTGTCTATCTATTGAGAAAAAA---CACACAGGGGCTTCTGGGC-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47541389 37 + 47698779 GGAGGC-----CC------------------------TGTGTGTGCGTGTGCG------------------CAGCGGCCTCTGG---- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56784822 28 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=153378.000000 s hg38.chr20_KI270870v1_alt 12716 10 + 183433 GCCCAGGTCT s panTro5.chr20 66345746 10 + 66533130 GCCCAGGTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024915 10 + 62195757 GCCCAGGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414441 10 - 578057 GCCCAGATCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939602 10 - 110113093 GCCCAGGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667519 10 - 92844088 GCCCAGGTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330040 10 + 96509753 GCCCAGGTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801267 9 - 16982598 GCCCA-GTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608640 10 - 3785965 GCCCAGGTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90231194 10 - 90373283 GCCCAGGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 133348 10 + 156971 GCCCAGGTCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483259 10 - 5823884 GCCCAGGTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134296 10 + 159171411 GCCCAGATCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16199997 10 + 16356641 GCCCAGGTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061166 10 + 1231380 GCCCAGGTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599319 10 + 11732439 GCCCAGGTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56784850 10 + 57149010 GCCCAGGTCT i micMur3.chr18 I 28 C 0 s proCoq1.NW_012150197v1 1786039 10 - 2029793 GCCCAGGTCT i proCoq1.NW_012150197v1 C 0 I 133 s otoGar3.GL873542 22766093 10 + 22939663 GCCCAGGTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725939 3 + 182113224 -------TCT i mm10.chr2 C 0 C 0 e canFam3.chr24 47541426 0 + 47698779 C e dasNov3.JH569290 181591 572 - 397369 I a score=457987.000000 s hg38.chr20_KI270870v1_alt 12726 37 + 183433 TCGGGCAGAGGGCACTGAAGGCATCTGTGCCTCTGTC s panTro5.chr20 66345756 37 + 66533130 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024925 37 + 62195757 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414451 37 - 578057 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939612 37 - 110113093 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667529 37 - 92844088 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330050 37 + 96509753 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801276 37 - 16982598 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608650 37 - 3785965 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90231204 37 - 90373283 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 133358 37 + 156971 TCGGGCAGAGGGCACTGAGGGCATCTGTGCCTCTGTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483269 37 - 5823884 TCGGGTAGAGGGCACTGAGGGCGTCTGTGCCTCTGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134306 36 + 159171411 TTGGGCAGAGGGTACTGAGAGCATCTGTGCCTC-GTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200007 36 + 16356641 TTGGGCAGAGGGTACTGAGGGCATCTGTGCCTC-GTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061176 36 + 1231380 TTGGGCAGAGGGTACTGAGGGCATCTGTGCCTC-GTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599329 36 + 11732439 TTGGGCAGAGGGTACTGAGGGCATCTGTGCCCC-GTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56784860 37 + 57149010 GCAGGCGGTGGGCACTGAGGGCACCTGTGCCTCTGTC i micMur3.chr18 C 0 I 119 s otoGar3.GL873542 22766103 37 + 22939663 AAGGGAAGTGGGCACTGAGAACATTTGTGCTTCTGCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725942 22 + 182113224 ---------------ATAGGGTATTTGTGATTTTGTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47541426 12 + 47698779 -------------------------CGTGCCCTCGTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786049 133 - 2029793 I e dasNov3.JH569290 181591 572 - 397369 I a score=316544.000000 s hg38.chr20_KI270870v1_alt 12763 28 + 183433 CGGGAGTCACTGTGGGCCTGGGCACCCT s panTro5.chr20 66345793 28 + 66533130 TGGGAGTCACTATGGGCCTGGGCACCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024962 28 + 62195757 TGGGAGTCACTATGGGCCTGGGCACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414488 28 - 578057 CGGGAGTCACTATGGGCCTGGGCACCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939649 28 - 110113093 CGGGAGTCACTATGGGCCTGGGCGCCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667566 28 - 92844088 CGGGAGTCACTATGGACTTGGGCACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330087 28 + 96509753 CGGGAGTCACTATGGACTTGGGCACCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801313 28 - 16982598 CGGGAGTCACTATGGACTTGGGCACCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608687 28 - 3785965 CAGGAATCACTATGGACTTGGGCACCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90231241 28 - 90373283 TGGGAGTCACTATGGACTTGGGCACCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 133395 28 + 156971 CGGGAGTCACTATGGACTTGGGCACCCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483306 28 - 5823884 TGGGAGTCACTATGGACTTGGGCACCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134342 28 + 159171411 TGGGCATCACTATGGCCCTGGGTACCCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200043 28 + 16356641 TGGGCGTCACTGTGGCCCTGGGCACCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061212 28 + 1231380 TGGGCGTCACTGTGGCCCTAGGCACCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599365 28 + 11732439 TGGGTGTCACTATGGCCCTGGGCACCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22766140 28 + 22939663 TGTGAGTCCCTATAGATCTGGCCACCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725964 27 + 182113224 -TGCAGGTGCTAGGAACCTGTGTACCTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47541438 25 + 47698779 TGTGGGTCCC---GGCCCTGGGCACCCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786049 133 - 2029793 I e micMur3.chr18 56784897 119 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=476762.000000 s hg38.chr20_KI270870v1_alt 12791 49 + 183433 TATCTGTGAACATGGGTGTCTTGGTGGGTCTCCTGCC---------------------CCACCCTGTGTG s panTro5.chr20 66345821 49 + 66533130 TATCTGTGAACATGGGTGTCTTGGTGGGTCTCATGCC---------------------CCACCCTGTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62024990 49 + 62195757 TATCTGTGAACATAGGTGTCTTGGTGGGTCTCATGCC---------------------CCACCCtgtgtg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414516 48 - 578057 TATCTGTGAACATGGGTGTCTTGGT-GGTCTCATGCC---------------------CCACCCTGTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939677 49 - 110113093 TATCTGCGAACATGGGTGTCTTGGTGGGTCTGGTGCC---------------------CCACCCtgtgtg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667594 49 - 92844088 TATCTGCGTACATGGGTGTCTTGGTGGATCTTGTGCC---------------------CCACACTGTGCG i rheMac8.chr10 C 0 I 238 s macFas5.chr10 96330115 49 + 96509753 TATCTGCGTACATGGGTGTCTTGGTGGAACTTGTGCC---------------------CCACACTGTGCG i macFas5.chr10 C 0 I 238 s macNem1.NW_012014244v1 16801341 49 - 16982598 TATCTGCGTACATGGGTGTCTTGGTGGATCTTGTGCC---------------------CCACACTGTGCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3608715 49 - 3785965 TATCTGCGTACATGGGTGTCTTGGTGGATCTTGTGCC---------------------CCACACTGTGCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90231269 49 - 90373283 TATCTGCGCACATGGGTGTCTTGGTGGATCTTGTGCC---------------------CCACACtgtgtg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 133423 49 + 156971 TATCTGCGTACATGGGTGTCTTGGTGGATCTTGTGCC---------------------CCACACtgtgcg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483334 49 - 5823884 TATCTGCGTACATGGGTGTCTTGGTGGATCTTGTGCC---------------------CCACGCTGTGCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134370 49 + 159171411 TATCTGTGTACATGGGGGTCTAGGTGGGTCTTGTGCC---------------------CCACCCTGTGTG i calJac3.chr5 C 0 I 5 s saiBol1.JH378156 16200071 49 + 16356641 TATCTGTGTACATGGGGGTCTCGGTGGGTCTTGTGGC---------------------CCACCCTGTGTG i saiBol1.JH378156 C 0 I 5 s cebCap1.NW_016107870v1 1061240 49 + 1231380 TATCTGTGTACATGGGGGTCTCGGTGGGTCTTGTGGC---------------------CCACCCTGTGTA i cebCap1.NW_016107870v1 C 0 I 5 s aotNan1.NW_018500483v1 2599393 49 + 11732439 TCTCTGTGTACACGGGGGTCTCGGTGGGTCCTGCACC---------------------CTACCCCGTGTC i aotNan1.NW_018500483v1 C 0 I 5 s otoGar3.GL873542 22766168 49 + 22939663 TATCTGCCCATGTGGGAGTCATGTCAGGTCTCATGTT---------------------TGGCTCTATGCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181725991 68 + 182113224 TGTCTTTGTATAT--GCATCTTGATAGATCTCATGCCTCCTCCTCCTTCTTTTTTTTTCCCCCCTGCGGG i mm10.chr2 C 0 I 25 e proCoq1.NW_012150197v1 1786049 133 - 2029793 I e canFam3.chr24 47541463 0 + 47698779 C e micMur3.chr18 56784897 119 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=137629.000000 s hg38.chr20_KI270870v1_alt 12840 26 + 183433 TGTACAT-----------------------------------G-GTG----------------TGTTCCTGTGTGTGT s panTro5.chr20 66345870 26 + 66533130 TGTACAT-----------------------------------G-GTG----------------TGTTCCTGTGTGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025039 26 + 62195757 tgtacat-----------------------------------g-gtg----------------tgttcctgtgtgtgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414564 26 - 578057 TGTACAT-----------------------------------G-GTG----------------TGTGCCTCTGTGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939726 24 - 110113093 tgtacat-----------------------------------g-gtg----------------tgtgcc--tgtgtgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667881 26 - 92844088 TGTACAT-----------------------------------G-GTG----------------TGTGCCTGTGTGTGT i rheMac8.chr10 I 238 C 0 s macFas5.chr10 96330402 26 + 96509753 TGTACAT-----------------------------------G-GTG----------------TGTGCCTGTGTGTGT i macFas5.chr10 I 238 C 0 s macNem1.NW_012014244v1 16801390 26 - 16982598 TGTACAT-----------------------------------G-GTG----------------TGTGCTTGTGTGTGT i macNem1.NW_012014244v1 C 0 I 541 s cerAty1.NW_012001373v1 3608764 26 - 3785965 TGTACAT-----------------------------------G-GTG----------------TGTGCTTGTGTGTGT i cerAty1.NW_012001373v1 C 0 I 218 s chlSab2.chr2 90231318 21 - 90373283 tgtgcc---------------------------------------------------------tgtgtgtgtgtgtgc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 133472 26 + 156971 tgtacat-----------------------------------g-gtg----------------tgtgcttgtgtgtgt i manLeu1.NW_012101369v1 C 0 I 1069 s colAng1.NW_012114444v1 5483383 26 - 5823884 TGTACAT-----------------------------------G-GTG----------------TGTGCTTGTGTGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134424 24 + 159171411 TATACAT-----------------------------------G-GTG----------------TGTGCCTGTGTGT-- i calJac3.chr5 I 5 C 0 s saiBol1.JH378156 16200125 24 + 16356641 GGTACAT-----------------------------------G-GTG----------------CTTGCCTGTGTGT-- i saiBol1.JH378156 I 5 C 0 s cebCap1.NW_016107870v1 1061294 24 + 1231380 TGTACAT-----------------------------------G-GCG----------------TGTACCTGCATGT-- i cebCap1.NW_016107870v1 I 5 C 0 s aotNan1.NW_018500483v1 2599447 17 + 11732439 TGTACAT-----------------------------------G-GTG----------------TGTGCC--------- i aotNan1.NW_018500483v1 I 5 I 1 s otoGar3.GL873542 22766217 17 + 22939663 ----CAT-----------------------------------GCATG----------------TGTAAATGT------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181726084 77 + 182113224 tgtatataaccttggctgtcctaaaacttgttctgtagaccag-gtggcttcaaatagagagatattcctgcctctgc i mm10.chr2 I 25 C 0 e proCoq1.NW_012150197v1 1786049 133 - 2029793 I e canFam3.chr24 47541463 0 + 47698779 C e micMur3.chr18 56784897 119 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=28470.000000 s hg38.chr20_KI270870v1_alt 12866 3 + 183433 GTG s panTro5.chr20 66345896 3 + 66533130 GTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025065 3 + 62195757 gtg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414590 3 - 578057 GTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939750 3 - 110113093 gtg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667907 3 - 92844088 GTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330428 3 + 96509753 GTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801957 3 - 16982598 GTG i macNem1.NW_012014244v1 I 541 C 0 s cerAty1.NW_012001373v1 3609008 3 - 3785965 GTG i cerAty1.NW_012001373v1 I 218 C 0 s chlSab2.chr2 90231339 3 - 90373283 gcg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 134567 3 + 156971 GTG i manLeu1.NW_012101369v1 I 1069 C 0 s colAng1.NW_012114444v1 5483409 3 - 5823884 GTG i colAng1.NW_012114444v1 C 0 I 109 s calJac3.chr5 58134448 3 + 159171411 GTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200149 3 + 16356641 GTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061318 3 + 1231380 GTG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22766234 3 + 22939663 GTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181726161 3 + 182113224 ctc i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1786049 133 - 2029793 I e canFam3.chr24 47541463 0 + 47698779 C e micMur3.chr18 56784897 119 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e aotNan1.NW_018500483v1 2599464 1 + 11732439 I a score=91171.000000 s hg38.chr20_KI270870v1_alt 12869 17 + 183433 -----------------------------CCAGT-------------------TAGGACATGTAC s panTro5.chr20 66345899 17 + 66533130 -----------------------------CCCGT-------------------TAGGACATGTAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025068 17 + 62195757 -----------------------------cctgt-------------------taggacatgtac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414593 17 - 578057 -----------------------------CCAGT-------------------TAGGACATGTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939753 17 - 110113093 -----------------------------ccagt-------------------taggatgtgtac i nomLeu3.chr13 C 0 I 2 s rheMac8.chr10 92667910 17 - 92844088 -----------------------------CCAGG-------------------TAGGACATGTAC i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96330431 17 + 96509753 -----------------------------CCAGT-------------------TAGGACATGTAC i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16801960 17 - 16982598 -----------------------------CCAGT-------------------TAGGACATGTAC i macNem1.NW_012014244v1 C 0 I 2 s cerAty1.NW_012001373v1 3609011 17 - 3785965 -----------------------------CCAGT-------------------TAGGACATGTAC i cerAty1.NW_012001373v1 C 0 I 2 s chlSab2.chr2 90231342 17 - 90373283 -----------------------------ccagt-------------------taggacatgtac i chlSab2.chr2 C 0 I 2 s manLeu1.NW_012101369v1 134570 17 + 156971 -----------------------------CCAGT-------------------AAGGACATGTAC i manLeu1.NW_012101369v1 C 0 I 2 s colAng1.NW_012114444v1 5483521 17 - 5823884 -----------------------------CCAGT-------------------TAGGACATGTAC i colAng1.NW_012114444v1 I 109 I 2 s calJac3.chr5 58134451 17 + 159171411 -----------------------------CCAGT-------------------GAGGACACGTTC i calJac3.chr5 C 0 I 2 s saiBol1.JH378156 16200152 17 + 16356641 -----------------------------CCAGT-------------------GAGGACAAGTTC i saiBol1.JH378156 C 0 I 2 s cebCap1.NW_016107870v1 1061321 17 + 1231380 -----------------------------CCAGT-------------------GAGGACACGTTC i cebCap1.NW_016107870v1 C 0 I 2 s otoGar3.GL873542 22766237 3 + 22939663 ----------------------------------------------------------CAC---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181726164 65 + 182113224 ccgagtgctgggattaaagacataagctaccactgccTACTTATAAGCATACACATGGTATGTAC i mm10.chr2 C 0 I 9 e proCoq1.NW_012150197v1 1786049 133 - 2029793 I e canFam3.chr24 47541463 0 + 47698779 C e micMur3.chr18 56784897 119 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e aotNan1.NW_018500483v1 2599464 1 + 11732439 I a score=177150.000000 s hg38.chr20_KI270870v1_alt 12886 13 + 183433 GTGTGTGGGCCTG s panTro5.chr20 66345916 13 + 66533130 GTGTGTGGGCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025085 13 + 62195757 gtgtgtgggcctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414610 13 - 578057 GTGTGTGGGCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939772 13 - 110113093 gtgtgtgggcctg i nomLeu3.chr13 I 2 C 0 s rheMac8.chr10 92667929 13 - 92844088 GTGTGTGGGCCTG i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96330450 13 + 96509753 GTGTGTGGGCCTG i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16801979 13 - 16982598 GTGTGTGGGCCTG i macNem1.NW_012014244v1 I 2 C 0 s cerAty1.NW_012001373v1 3609030 13 - 3785965 GTGTGTGGGCCTG i cerAty1.NW_012001373v1 I 2 C 0 s chlSab2.chr2 90231361 11 - 90373283 gtgtgt--gcctg i chlSab2.chr2 I 2 C 0 s manLeu1.NW_012101369v1 134589 13 + 156971 GTGTGTGGGCCTG i manLeu1.NW_012101369v1 I 2 C 0 s colAng1.NW_012114444v1 5483540 13 - 5823884 GTGTGTGGGCCTG i colAng1.NW_012114444v1 I 2 C 0 s calJac3.chr5 58134470 13 + 159171411 GTGTGCAGCCCTG i calJac3.chr5 I 2 C 0 s saiBol1.JH378156 16200171 13 + 16356641 GTGTGCGGGCCTG i saiBol1.JH378156 I 2 C 0 s cebCap1.NW_016107870v1 1061340 13 + 1231380 GTGTGCGGGCCTG i cebCap1.NW_016107870v1 I 2 C 0 s aotNan1.NW_018500483v1 2599465 13 + 11732439 GTGTGCGGGCCTG i aotNan1.NW_018500483v1 I 1 C 0 s proCoq1.NW_012150197v1 1786182 13 - 2029793 gtgcgtgggcctg i proCoq1.NW_012150197v1 I 133 C 0 s otoGar3.GL873542 22766240 13 + 22939663 ACATGTGGGCCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181726238 13 + 182113224 ATGTGTGGGCCTA i mm10.chr2 I 9 C 0 e canFam3.chr24 47541463 0 + 47698779 C e micMur3.chr18 56784897 119 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=27230.000000 s hg38.chr20_KI270870v1_alt 12899 2 + 183433 TG s panTro5.chr20 66345929 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025098 2 + 62195757 tg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414623 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939785 2 - 110113093 tg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667942 2 - 92844088 CG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330463 2 + 96509753 CG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801992 2 - 16982598 CG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609043 2 - 3785965 CG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90231372 2 - 90373283 tg i chlSab2.chr2 C 0 I 1343 s manLeu1.NW_012101369v1 134602 2 + 156971 CG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483553 2 - 5823884 TG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134483 2 + 159171411 TG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200184 2 + 16356641 TG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061353 2 + 1231380 TG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599478 2 + 11732439 TG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1786195 2 - 2029793 tg i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22766253 2 + 22939663 TG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181726251 2 + 182113224 TG i mm10.chr2 C 0 C 0 s canFam3.chr24 47541463 2 + 47698779 TG i canFam3.chr24 C 0 C 0 e micMur3.chr18 56784897 119 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=592070.000000 s hg38.chr20_KI270870v1_alt 12901 85 + 183433 TCTGCCTGTATGGGGGTCTCTGTGGGTGA-GCTCTGCGTTGTATC-TGA-GTGGGTCTACATG--TCCTTGGCTGAGTGTGGGCATCTGG s panTro5.chr20 66345931 85 + 66533130 TCTGCCTGTATGGGGGTCTCTGTGGGTGA-GCTCTGCGTTGTGTC-TGA-GTGGGTCTACATG--TCCTTGGCTGAGTGTGGGCATCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025100 85 + 62195757 tctgcctgtatgggggtctctgtgggtga-gctctgcgttgtgtc-tga-gtgggtCTACATG--TCCTTGGCTGAGTGTGGGCATCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414625 85 - 578057 TCTGCCTGTATGGGGGTCTCTGTGGGTGA-GCTCTGCGTTGTATC-TGA-GTGGGTCTACATG--TCCTTGGCTGAGTGTGGGCATCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939787 85 - 110113093 tctgcctgtatgggggtttctgtgggtgA-GCTCTGCATTGGATC-CGA-GTGGGTCTACATG--TCCTCGGCTGAGTGTGGGCGTCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92667944 84 - 92844088 TCTGCCCGCATGGGGGTTTCTGTGGGTGA-GCTCTGCGTTGTATC-TGA-GTGTGTCTACGTG--TCCTTGGCTGAGTGTGGGGGTCT-G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330465 84 + 96509753 TCTGCCCGCATGGGGGTTTCTGTGGGTGA-GCTCTGCGTTGTATC-TGA-GTGTGTCTACGTG--TCCTTGGCTGAGTGTGGGGGTCT-G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16801994 76 - 16982598 TCTGCCCGCATGGGGGTTTCTGTGGGTGA-GCTCTGCGTTGTATC-TGA-GTGTGTCTACGTG--TCCTTGGCTGAGTG--------T-G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609045 84 - 3785965 TCTGCCTGCATGGGGGTTTCTGTGGGTGA-GCTCTGCGTTGTATC-TGA-GTGTGTCTATGTG--TCCTTGGCTGAGTGTGGGGGTCG-G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90232717 84 - 90373283 TCTGCCTGCATGGGGGTTTCTCTGGGTGA-GCTCTGCGTTGTGTC-TGA-GTGTGTCTACATG--TCCTTGGCTGAGTGTGGGGGTCT-G i chlSab2.chr2 I 1343 C 0 s manLeu1.NW_012101369v1 134604 85 + 156971 TCTGCCTGCATGGGGGTTTCTGTGGGTGA-GCTCTGCGTTGTATCTTGA-GTGTGTCTACGTG--TCCTTGGCTGAGTGTGGGGGTCT-G i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483555 85 - 5823884 TCTGCCTGCATGGGGGTTTCTGTGGGTGA-GCTCTGCGTTGTATC-TGA-GTGTGTCTACATG--TCCTTGGCTGAGTGTGGGGGTCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134485 51 + 159171411 ----------CGGGGGTTTCTGTGGGTGA-GCTCTGCATTGCATC-TGA-GTG-----------------GGCTGAGTGT---------G i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200186 50 + 16356641 TCTGCCTGTACGGGGGTTT------------CTCTGCATTGCATC-TGA-GTG-----------------GGTTGAGCGT---------G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061355 51 + 1231380 TCTGCCTGTAC-GGGGTTT------------CTCTGCATTGCATC-TGA-GTG-----------------GGCTGAGCGTGG-------G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599480 61 + 11732439 TCTGCCTGTACGGGAGTTTCTGTGGGTGA-GCTCTGCATTGCATC-TGA-GTG-----------------GGCTGAGCGT---------G i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1786197 86 - 2029793 TCTGCCTGCACGGAGGTTCCTGCGGGTGA-GCTCTGCGCTGGGTC-TGACATG-GTCTGTGTGCGTCCTTAGCTGAGTAT-GGGGTCTGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22766255 67 + 22939663 TCTG-CTGCATGG-GGTGTCTGTGGGCAA-G-------------------GTG-GTCTGTGTGTTTCCTTAGATGAGTTTGGGGGTCTAG i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181726253 82 + 182113224 TCTGCTTGCGTGG-GGTTTCTGAGGGT-A-GCTCTGTACTATATC-CAA-AGGAGTCTGTGTGTATTCTTGTATAAATATTTGACTG--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47541465 59 + 47698779 TCCGCGTGTGTG------TCTGCGGGGGACGCTCTGCG-TGGGTC-CCG-GCG-------GCA-------GGAGGGATCTGG-------- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56784897 119 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=336172.000000 s hg38.chr20_KI270870v1_alt 12986 35 + 183433 GGGGTCTGTATGCCCTCATGTGGAAGCAGAACTTG s panTro5.chr20 66346016 35 + 66533130 GGGGTCTGTATGCCCTCATGTGGAAGCAGAACTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025185 35 + 62195757 GGGGTCTGTATGCCCTCAAGTGGAAGCAGAACTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414710 35 - 578057 GGGGTCTGTATGCCCTCATGTGGAAGCAGAACTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939872 34 - 110113093 GGGGTCCGTATG-CCTCATGTGGAAGCAGAACTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668028 35 - 92844088 GGGGTCTGTGTGCTCTCAGGTGGAAGCAGAACTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330549 35 + 96509753 GGGGTCTGTGTGCTCTCAGGTGGAAGCAGAACTCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802070 31 - 16982598 GGGGTCTGTAT-TTCTCAGGTGGA---AGAGCTCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609129 35 - 3785965 GGGGTCTGTATGCTCTCAGGTGGAAGCAGAACTTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90232801 35 - 90373283 GGGGTCTGTATGCTCCCAGGTGGAAGCAGAACTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 134689 35 + 156971 GGGGTCTGTATGCTCTCAGGTGGAAGCAGAACTTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483640 35 - 5823884 GGGGTCTGTATGCCCTCAGGTGGAAGCAGAACTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134536 26 + 159171411 GGGGT---------CTCATGTGGAAGCACCACTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200236 26 + 16356641 GGGGT---------CTCATGTGGAAGCACCACTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061406 26 + 1231380 GGGGT---------CTCATGTGGAAGCACCACTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599541 26 + 11732439 GGGGT---------CTCATGTGGAAGCACCACTTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56785016 32 + 57149010 GGGGTCTGTTTGTCCTCATGTGGAAGCAGAAC--- i micMur3.chr18 I 119 C 0 s proCoq1.NW_012150197v1 1786283 34 - 2029793 -GGGTCTGTTTGTCCTCAGGTGGAAGCAGAACTTG i proCoq1.NW_012150197v1 C 0 I 1741 s otoGar3.GL873542 22766323 35 + 22939663 GAGGTCTGTTTGCCCTCTTGTGGATATAAAACTTG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181726335 32 + 182113224 GAGGACTGCTGGTCTTCATATGAAGCCAAATG--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47541524 33 + 47698779 --GGGCTGCGTGTCTTTGAGCAGGAGCAGAACTTG i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 181591 572 - 397369 I a score=379939.000000 s hg38.chr20_KI270870v1_alt 13021 29 + 183433 TTGGCCATAGGCAACCCACCTTCTTTTTT-------- s panTro5.chr20 66346051 29 + 66533130 TTGGCCATAGGCAACCCACCTTCTTTTTT-------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025220 29 + 62195757 TTGGCCATAGGCAACCCACCTTCTTTTTT-------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414745 29 - 578057 TTGGCCATAGGCAACCCACCTTCTTTTTT-------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939906 29 - 110113093 TTGGCCATAGGCAACCCACCTTCTTTTTT-------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668063 29 - 92844088 TTGGCCACAGGCAACCCACCTTCTTTTTT-------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330584 29 + 96509753 TTGGCCACAGGCAACCCACCTTCTTTTTT-------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802101 29 - 16982598 TTGGCCACAGGCAACCCACCTTCTTTTTT-------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609164 29 - 3785965 TTGGCCACAGGCAACCCACCTTCTTTTTT-------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90232836 29 - 90373283 TTGGCCACAGGCAACCCCCCTTCTTTTTT-------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 134724 29 + 156971 TTGGCCACAGGCAACCCACCTTCTTTTTT-------- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483675 29 - 5823884 TTGGCCACAGGCAACCCACCTTCTTTTTT-------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134562 29 + 159171411 TTGGCCATAGGCAACCCAACTTCTTTTTT-------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200262 29 + 16356641 TTGGACATAGGCAACCCAACTTCTTTTTC-------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061432 29 + 1231380 TTGGCCATAGGCAACCCAACTTCTTTTTC-------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599567 28 + 11732439 TTGGCCATAGGCAACCCGACTTCTTTTT--------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56785048 28 + 57149010 TTGGCCACAGACAATCCAACTTCTCTTT--------- i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22766358 29 + 22939663 TTGGCCACAGACAATCCAACTTTCTTTTT-------- i otoGar3.GL873542 C 0 I 412 s mm10.chr2 181726367 27 + 182113224 TTAACCATAGACAACCTATTTTGTTTT---------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47541557 37 + 47698779 TTGCCCACAGACAACCGACTTCTCTCTCCCCCGCGCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e dasNov3.JH569290 181591 572 - 397369 I a score=13365.000000 s hg38.chr20_KI270870v1_alt 13050 1 + 183433 T s panTro5.chr20 66346080 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025249 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414774 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939935 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668092 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330613 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802130 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609193 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90232865 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 134753 1 + 156971 T i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483704 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134591 1 + 159171411 T i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200291 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061461 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599595 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56785076 1 + 57149010 T i micMur3.chr18 C 0 C 0 s mm10.chr2 181726394 1 + 182113224 T i mm10.chr2 C 0 C 0 s canFam3.chr24 47541594 1 + 47698779 C i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e dasNov3.JH569290 181591 572 - 397369 I e otoGar3.GL873542 22766387 412 + 22939663 I a score=220716.000000 s hg38.chr20_KI270870v1_alt 13051 19 + 183433 GTCTTTTGCTAAAA-GAGGA s panTro5.chr20 66346081 19 + 66533130 GTCTTTTGCTAAAA-GAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025250 19 + 62195757 GTCTTTTGCTAAAA-GAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414775 19 - 578057 GTCTTTTGCTAAAA-GAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939936 19 - 110113093 GTCTTTTGCTAAAA-GAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668093 19 - 92844088 GTCTTTTGCTAAAA-GAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330614 19 + 96509753 GTCTTTTGCTAAAA-GAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802131 19 - 16982598 GTCTTTTGCTAAAA-GAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609194 19 - 3785965 GTCTTTTGCTAAAA-GAGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90232866 19 - 90373283 GTCTTTTGCTAAAA-GAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 134754 19 + 156971 GTCTTTTGCTAAAA-GAGGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483705 19 - 5823884 GTCTTTTGCTAAAA-GAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134592 20 + 159171411 GTCTTCTTCTAAAATGAGTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200292 20 + 16356641 GTCTTCTTCTAAAATGAGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061462 20 + 1231380 GTCTTCTTCTAAAATGAGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599596 20 + 11732439 GTCTTCTTCTAAAATGAGGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56785077 19 + 57149010 GTCTTTTGCTGAAA-GAGGA i micMur3.chr18 C 0 I 1090 s otoGar3.GL873542 22766799 19 + 22939663 GTCTTTTGCTAAAT-GGAAA i otoGar3.GL873542 I 412 I 6 s mm10.chr2 181726395 10 + 182113224 GTCTTTTACC---------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47541595 19 + 47698779 CCTTTTTGCTGTGA-GAGGA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e dasNov3.JH569290 181591 572 - 397369 I a score=13923.000000 s hg38.chr20_KI270870v1_alt 13070 1 + 183433 A s panTro5.chr20 66346100 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025269 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414794 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939955 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668112 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330633 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802150 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609213 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90232885 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 134773 1 + 156971 A i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483724 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134612 1 + 159171411 A i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200312 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061482 1 + 1231380 A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599616 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22766824 1 + 22939663 A i otoGar3.GL873542 I 6 C 0 s canFam3.chr24 47541614 1 + 47698779 A i canFam3.chr24 C 0 I 218 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e mm10.chr2 181726405 0 + 182113224 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=2291738.000000 s hg38.chr20_KI270870v1_alt 13071 264 + 183433 CTC------AGCCTAGGCAAGCTGTGAAAGGCTGCAGAGAAGA-----CGTTCTCACGCTGACACGTAACTCTCCCGCCGT-----CCTGCAGAGGTGGTGAGCATCACA--CTCTGCTCTGGGTTGGTCTTTAAGTCCTTCCCTTCTCCCTGC---TTTTCTTCCTTG------CTGGACGCACCCTGGCTTATCCAACCCGTGTGTGT--GCAGCTCGGCCGCATCTGGACCTGCTTTGCAGGCAACGCCACAGCTGACACGAGCAGTC-GCCA-GTCTCAGAGCCGCTCCTC s panTro5.chr20 66346101 264 + 66533130 CTC------AGCCTAGGCAAGCTGTGAAAGGCTGCAGAGAAGA-----CGTTCTCACGCTGACACGTAACTCTCCCGCCGT-----CCTGCAGAGGTGGTGAGCGTCACA--CTCTGCTCTGGGTTGGTCTTTAAGTGCTTCCCTTCTCCCTGC---TTTTCTTCCTTG------CTGGACGCACCCTGGCTTATTCAACCCGTGTGTGT--GCAGCTCGGCTGCATCTGGACCTGCTTTGCAGGCAACGCCACAGCTGACACGAGCAGTC-GCCA-GTCTCAGAGCCGCTCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025270 264 + 62195757 CTC------AGCCTAGGCAAGCTGTGAAAGGCTGCAGAGAAGA-----CGTTCTCACGCTGACACGTAACTCTCCCGCCGT-----CCTGCAGAGGTGGTGAGCGTCACA--CTCTGCTCTGGGTTGGTCTTTAAGTCCTTCCCTTCTCCCTGC---TTTTCTTCCTTG------CTGGATGCACCCTGGCTTATTCAACCCGTGTGTGT--GCAGCTCGGCTGCATCTGGACCTGCTTTGCAGGCAACGCCACAGCTGACACGAGCAGTC-GCCA-GTCTCAGAGCCGCTCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 414795 264 - 578057 CTC------AGCCTAGGCAAGCTGTGAAAGGCTGCAGAGAAGA-----CGTTCTCATGCTGACATGTAACTCTCCCGCCGT-----CCTGCAGAGGTGGTGAGTGTCACA--CTCTGCTCTGGGTTGGTCTTTAAGTCCTTCCCTTCTCCCTGC---TTTTCTTCCTTG------CTGGACGCACCCTGGCTTATTCAACCTGTGTGTGT--GCAGCTCGGCTGCATCTGGACCTGCTTTGCAGGCAACGCCACAGCTGACACGAGCAGTC-GCCA-GTCTCAGAGCCGCTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109939956 264 - 110113093 CTC------AGCCTAGGCAAGCTGTGAAAGGCTGCAGAGAAGA-----CGTTCTCACCCTGACACGTAACTCTCCCGCCGT-----CCTGCAGAGGTGGTGAGCGTCGCG--CTCTGCTCTGGGTTGGTCTTTGAGTCCTTCCCTTCTCCCTGC---TTTTCGTCCTTG------CTGGACGCACCCTGGCTTATTCAGCCCCTGTGTGT--GCAGCTCAGCTGCGTCTGGACCTGCTTTGCAGGCAACGCCACAGCTGACACGAGCAGTG-GCCG-GTCTCAGAGCGGCTCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668113 264 - 92844088 CTC------AGCCTAGGCAAGCTGTGAAAGGCTGCAGAGAAAA-----CGTCCGCATCCTGACGTGCGTCTCTCATGCCGT-----CCTGCAGAGGTGCTGAGCGTCGCG--CTCTGCTCTGGGTTGGTCTTCGAGTCCTTCCCTTCTCCCCGC---TTTTCTTCCCTG------CTGGACACACCCTGGCTTATTCAACCCCCGTGTGT--GCAGCTCGGTGGCTTCTGGGCGTGCTTTGCAGGCAGTGCCACAGCTGACGCGAGCAGCC-GCCA-GTCTCAGGGCCGCTCCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330634 264 + 96509753 CTC------AGCCTAGGCAAGCTGTGAAAGGCTGCAGAGAAAA-----CGTCCGCATCCTGACGCGCGTCTCTCACGCCGT-----CCTGCAGAGGTGGTGAGCGTCGCG--CTCTGCTCTGGGTTGGTCTTCGAGTCCTTCCCTTCTCCCCGC---TTTTCTTCCCTG------CTGGACGCACCCTGGCTTATTCAACCCCCGTGTGT--GCAGCTCGGTGGCTTCTGGGCGTGCTTTGCAGGCAGTGCCACAGCTGACGCGAGCAGCC-GCCA-GTCTCAGGGCCGCTCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802151 262 - 16982598 CTC------AGCCTAGGCAAGCTGTGAAAGGCTGCAGAGAAAA-----CGTCCGCACCCTGA--CACGTCTCTCATGCCGT-----CCTGCAGAGGTGGTGAGCGTCGCG--CTCTGCTCTGGGTTGGTCTTCGAGTCCTTCCCTTCTCCCCGC---TTTTCTTCCCTG------CTGGACGCACCCTGGCTTATTCAACCCCCGTGTGT--GCAGCTCGGTGGCTTCTGGGCGTGCTTTGCAGGCAGTGCCACAGCTGACGCGAGCAGCC-GCCA-GTCTCAGGGCCGCTCCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609214 264 - 3785965 CTC------AACCTAGGCAAGCTGTGAAAGGCGGCAGAGAAAA-----CGTCCGCATCCTGACGCGCGTCTCTCACGCCGT-----CCCGCAGAGGTGGTGAGCGTCGCG--CTCTGCTCTGGGTTGGTCTTCGAGTCCTTCCCTTCTCCCCGC---TTTTCTTCCCTG------CTGGATGCACCCTGGCTTATTCAACCCCCGTGTGT--GCAGCTCGGTGGCTTCTGGGCGTGTTTTGCAGGCAGTGCCACAGCTGATGCGAGCAGTT-GCCA-GTCTCAGGGCCGCTCCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90232886 262 - 90373283 CCC------AACCTAGGCGAGCTGCGAAAGGCTGCAGGGAAAA-----TGTCTGCATCCTG--ACGTGTCTCCCACGCCGT-----CCTGCAGAGGTGGCGAGCGTCGCG--CTCTGCTCTGGGTTGGTCTTCGAGTCCTTCCCTTCTCCCCGC---TTTTCTTCCTTG------CTGGACGCACCCTGGCTTATTCAACCCCCGTGTGT--GCAGCTTGGCGGCTTCTGGGCGTGCTTTGCAGGCAGTGCCACGGCTGACGCGAGCAGCC-GCCC-ATCTCAGGGCCGCTCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 134774 264 + 156971 CTC------AACCTAGGCAAGCTGTGAAAGGCTGCCGGGAAAA-----CGTCCGCACCCTGGCACGCGTCTCTCATGCTGT-----CCTGCAGAGGTGGTGAGCGCCGCG--CTCTGCTCTGGGTTGGTCTTCGAGTCCTTCCCTTCTCCCCGC---TTTTCTTCCCTG------CTGGACGCACCCTGGCTTATTCAACCCCCGTGTGT--GCAGCTCGGCGGCTTCTGGGCGTGCTTTGCAGGCAGTGCCACAGCTGACGCGAGCAGCC-GCCA-GTCTCAGGGCCGCTCCCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483725 262 - 5823884 CTC------AACCTAGGCAAGCTGTGAAAGGCTGCAGGGAAAA-----CGTTCGCACCCTGACGTGCATCTCTCATGCCGT-----CCTGCAGAGATGGTGAGTGTCGCA--CTCTGCTCTGGGTTGGTCTTCGAGTCCTTCCCTTCTCCCCGC---TTTTCTTCCTTG------CTGGACGCACCCTGCCTTATTCAACTCCCGTGTGT--GCAGCTCGGCGGCTTCTGGACATGCTTTGCAGGCAGTGCCACAGCTGACACGAGCAGTC-GCCA-G--TCAGGGCTGTTCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134613 245 + 159171411 CGC------AGACTCGGTAAGCTGTGAATGGCTGCATAGAAGA-----CGTTCGCACCCTGAGGCACCACTCTCAAGCCAT-----CCTGCAAAGGCGGTGAGCATTGCG--CTCTGCTCTGGGCTGATCTCTGAGTCCTTTCCATCTCCCTGC----------TTTTG-------------------GGCGAATTCCACCCCTGTGTGT--GCAGCTGGGCAGCTCCTGGACATGCTTTGCAGGTCACACCACAGCTGATGTGGGCAGCCAGCCT-GTCTCAGGGCCATTCCTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200313 247 + 16356641 CTT------GGACTCAGTAAGCTGTGAAAGGCTGCAAAGAAGA-----CGTTCGCACCCCAAGGC-----------GCCGT-----CCTGCAGAGGCGGCGAGCGGCGTG--CTCTGCTCTGGGCTGCTCTCTGCGTCCTTCCCTGCTTTTCTT----------CCTTG------CTGGATGCACCCTGGCAAGTTCCACTGCTGCGTGT--GCAGCTGGGTAGCTCCTGGACGTGCTTTGCCGGCCACGCCACAGCTGACGTGGGCAGCTAGCCT-GTCTCGGGGCTGCTCCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061483 265 + 1231380 CTC-----AAGACTCGGTAAGCTGTGAAAAGCTGCAGAGAAGA-----CGTTGGCACCCTGAGGCGCCACTCTCACGCCGT-----CCTGCA-AGGCGGGGAGCGTTGAG--CTCTGCCCTGGGCTAGTCTCCTCGTCCTTCCCATCTCCCTGC---TTTTCTTCCTTG------CTGGACACACCCTGGCGCATTCCACCCGTGTGTGT--GCAGCTGGGCAGCTCCTGGACGTGCTTTGCAGGCCACGCCACAGCTGATGTGGGCAGCCAGCCT-GTCTCAGGGCTGCTCCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599617 250 + 11732439 CTC------AGACTCGGTAAGCTGTGAAAGGCTGCAGAGAAGA-----CGTTCGCACCCTGAGGCGTCACTGTCACGCCGT-----CCTGCAGAGGCGGTGAGCATTGCG--CTCTGCTCTGGGCTGGTCTCTGAGTCCTTCCCATCTCCCTGC---TTTTCTTCCTTG------CTGGACGCACCCTGGCGAATTCCACCCGTGTGTGT--GCAGCTGGGCAGCTCCCGGACGTGCTATGCAGGTCACGCCACAGCTGAC----------------GTCTCAGGGCCGCTCCTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22766825 256 + 22939663 CTCCTGCAAAAACCTGGCAAGCTGCAAGGGGCTGCAGAGCAGT-----GGTTTGCTCCC---------ACCCTGGCACTGC-----TCC----------TGAGC----TA--CACTGTTCTGGGTTGGTCTTCACTTCCCTCCCACCTCCCTGC---TTCTCTTCCTTGGCTTATTCAGCTGAATCCTGACTTATTCAGCCTCAATTTGTAGACAGCTGGGTGGTTTCTGGCTGTGCTTTGCAGGCAGCACTGCAGATGACATGTGTAATC-ATCAGGGTTCAGAGCCGTTCCTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181726405 175 + 182113224 -------------------AGCCATGAGAGGCCACGGAGAAAGGCACTTGCTCCTACACTGGCTCCTGGCCCCTTCTCTGTGGCACTCAGGAAAACTACTGGAAGCCAAGACCTCTGCTCTA------------------------CTCCTTGAATGTTTTCTCCCTAA---------------------------------------GT--G----------------GGAACTGCTT---AGTCAGTCCTAC---------------TC-ACGA-ACAGCAGGGCCATCTCTC i mm10.chr2 C 0 I 110 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e canFam3.chr24 47541615 218 + 47698779 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=227499.000000 s hg38.chr20_KI270870v1_alt 13335 23 + 183433 AGCGGAGACGTGTTGGGTCAGAG s panTro5.chr20 66346365 23 + 66533130 AGCGGAGACGTGTTGGGTCAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025534 23 + 62195757 AGCGGAGACGTGTTGGGTCAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 415059 23 - 578057 AGTGGAGACGTGTTAGGTCAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109940220 23 - 110113093 AGTGGAGACGTGTTGGGTCAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668377 23 - 92844088 AGCGGAGACGTGTCAGGCCAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330898 23 + 96509753 AGCGGAGACGTGTCAGGCCAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802413 23 - 16982598 AGCGGAGACGTGTCAGGCCAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609478 23 - 3785965 AGCGGAGACGTATCAGGCCAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90233148 23 - 90373283 AGCGGAGACGTGTCAGGCCAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 135038 23 + 156971 AGCGGAGACGTGTCAGGCCAGAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5483987 23 - 5823884 AGCGGAGACGTGTTGGGTCAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134858 23 + 159171411 AGCAGGGACGTGCTGGGTCAGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200560 23 + 16356641 AGCAGGGACGTGCTGGGTCAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061748 23 + 1231380 AGCAGGGACGTGCTGGGTCAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599867 23 + 11732439 AGCAGGGACGTGCTGGGTCAGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22767081 21 + 22939663 TGTGTAGACTT--TGGGTCAGGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e canFam3.chr24 47541615 218 + 47698779 I e mm10.chr2 181726580 110 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=699863.000000 s hg38.chr20_KI270870v1_alt 13358 85 + 183433 GGTC--TGTGttttctttccttt-----c-ttcttttttgagacagggtcttgccctgtcacccaggctggggtgcagtggcactatcatggc s panTro5.chr20 66346388 85 + 66533130 GGTC--TGTGttttctttccttt-----c-ttcttttttgagacagggtcttgccctgtcacccaggctggggtgcagtggcactatcatggt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025557 85 + 62195757 GGTC--TGTGttttctttccttt-----c-ttcttttttgagacagggtcttgccctgtcacccaggctggggtgcagtggcactatcatggt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 415082 85 - 578057 GGTC--TGTGttttctttccttt-----c-ttcttttttgagacagggtcttgccctgtcacccaggctggggtgcagtggcactatcatggc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109940243 79 - 110113093 GGTC--TGTGttttctttc---------c-ttcttttttgaga-aaggttttgccctgtcacccaggct-gggtgcagtggcactatcatggc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668400 87 - 92844088 GGTCTGTGTGttttcttcccttt-----ctttcttttttgagacggggtcttg-tctgtcgccccggctggggtgcagtggtgctatcatggc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96330921 87 + 96509753 GGTCTGTGTGttttcttcccttt-----ctttcttttttgagacggggtcttg-tctgtcgccccggctggggtgcagtggtgctatcatggc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802436 87 - 16982598 GGTCTGTGTGttttcttcccttt-----ctttcttttttgagacggggtcttg-tctgtcgccccggctggggtgcagtggtgctatcatggc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609501 87 - 3785965 GGTCTGTGTGtttacttcccttt-----ctttcttttttgagacggggtcttg-tctgtcgcccaggctggggtgcagtggtgctatcatggc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90233171 87 - 90373283 GGTCTGTGTGttttcttcccttt-----ctttcttttttgagacgggggcttg-tctgtcgcccaggctggggtgcagtggtgctatcatggc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 135061 87 + 156971 GGTCTGTGTGttttcttcccttt-----ctttctcttttgagacggggtcttg-tctgtcgcccaggctggggtgcagtggtgctatcatggc i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5484010 88 - 5823884 GATCTGTGTGttttctttccttt-----ctttcttttttgagacggggtcttgctctgtcgcccaggctggggtgcagtggtgctatcatggc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134881 84 + 159171411 GAtctctgtgttttccttctttc---------tttttttgagacagggtcttgctctgtcacccaggttggggtgcagtggcactagcatggc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200583 82 + 16356641 GAtctctgtgttttctttctttc-----------tttttgaaacagggtcttgctctgtcacccggcctggggtgcagtggcactagcatggc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061771 89 + 1231380 GATCTCTGTGttttctttctttt----tttttttttttttagacagggtcttgctctgtcacccagcctggggtgcagtggcactagcgtggc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2599890 93 + 11732439 GATCTCTGTGttttctttcttcctttctttcttttttttgaggcagggtcttgctctgtcaccgaggctggggtgcagtggcactagcgtggc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e canFam3.chr24 47541615 218 + 47698779 I e mm10.chr2 181726580 110 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e otoGar3.GL873542 22767102 0 + 22939663 C a score=1233622.000000 s hg38.chr20_KI270870v1_alt 13443 223 + 183433 tcactgcagccctgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctgggactacaggcatgtgccaccatgcctggctaatttttgtg-ttttttttt--gtagagacggggtttcaccatgttgcccaggctggtctcgatctcctgagcttcagcctctacctcagcctcccaaagtgctcaggttatagccatgacccaccgtgcct s panTro5.chr20 66346473 225 + 66533130 tcactgcagccctgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctgggactacaggcatgtgccaccatgcctggctaatttttgta-tttttttttttgtagagacggggtttcaccatgttgcccaggctggtctcgatctcctgagcttcagcctctacctcagcctcccaaagtgctcaggttacagccatgacccaccgtgcct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025642 223 + 62195757 tcactgcagccctgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctgggactacaggcatgtgccaccatgcctggctaatttttgta-ttttttttt--gtagagacggggtttcaccatgttgcccaggctggtctcgatctcctgagcttcagcctctacctcagcctcccaaagtgctcaggttacagccatgacccaccgtgcct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 415167 223 - 578057 tcactgcagccctgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctgggactacaggcatgtgccaccatgcctggctaatttttgta-ttttttttt--gtagagacggggtttcaccatgttgcccaggctggtctcgatctcctgagcttcagcctctacctcagcctcccaaagttctcaggttacagccatgacccactgtgcct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109940322 218 - 110113093 tcactgcagccctgacc-ccctgggctcaggtgatcctcccacctcagcctctcaattagctgggactacaggcatgtgccaccatgcctggctaatttttgta-ttttttt----gtagagacggggtttcaccatgttgcccaggctggtctggatctcctgagcttcagc--ctacctcagcctccctaagtgctcaggttacagtcatgagccactgcgcct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668487 218 - 92844088 tcactgcagccgtgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctggcactacaggcatgtgccaccatgcctggctaatttttgta-ttttttt----gtagagac-gggtttcaccatgttgcccaggctggtctcgaacccctgagcttcagc--ctacctcggtcccccaaagtgctcaggttacagacatgagccaccgcacct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96331008 218 + 96509753 tcactgcagccgtgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctggcactacaggcatgtgccaccatgcctggctaatttttgta-ttttttt----gtagagac-gggtttcaccatgttgcccaggctggtctcgaacccctgagcttcagc--ctacctcggccccccaaagtgctcaggttacagacgtgagccaccgcacct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802523 218 - 16982598 tcactgcagccgtgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctggcactacaggcaagtgccaccatgcctggctaatttttgta-ttttttt----gtagagac-gggtttcaccatgttgcccaggctggtctcgaacccctgagcttcagc--ctacctcggcctcccaaagtgctcaggttacagacgtgagccaccgcacct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609588 218 - 3785965 tcactgcagccgtgacctccctgggctcaggtgatcctcctacctcagcctctcaagtagctggcactacaggcatgtgccaccatgcctggctaatttttgta-ttttttt----gtagagac-gggtttcaccatgttgcccaggctggtctcgaacccctgagcttcagc--ctacctcggcctcccaaagtgctcaggttacagacgtgagccaccgcacct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90233258 219 - 90373283 tcactgcagccgtgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctggcactacaggcatgtgccgccatgcctggctaatttttgtatttttttt----gtagagac-gggtttcaccatgttgcccaggctggtctcgaacccctgagcttcagc--ctacctcggcctcccaaagtgctcaggttacagacatgagctaccgcacct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 135148 218 + 156971 tcactgcagccgtgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctggcactacaggcatgtgccaccatgcctggctaatttttgta-ttttttt----gtagagac-aggtttcaccatgttgcccaggctggtctcgaacccctgagcttcagc--ctacctcggcctcccaaagtgctcaggttacagatgtgagccaccgcacct i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5484098 219 - 5823884 tcactgcagccgtgacctccctgggctcaggtgatcctcccacctcagcctctcaagtagctggcactacaggcatgtgccaccatgcctggctaatttttgtatttttttt----gtagagac-gagtttcaccatgttgcccaggctggtctcgaacccctgagctccagc--ctacctcggcctcccaaagtgctcaggttacagacatgagccaccgcacct i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e canFam3.chr24 47541615 218 + 47698779 I e mm10.chr2 181726580 110 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16200665 0 + 16356641 C e cebCap1.NW_016107870v1 1061860 0 + 1231380 C e calJac3.chr5 58134965 0 + 159171411 C e aotNan1.NW_018500483v1 2599983 0 + 11732439 C e otoGar3.GL873542 22767102 0 + 22939663 C a score=29064.000000 s hg38.chr20_KI270870v1_alt 13666 5 + 183433 ggtcA------ s panTro5.chr20 66346698 5 + 66533130 ggtcA------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025865 5 + 62195757 ggtcA------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 415390 5 - 578057 ggtcA------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109940540 5 - 110113093 ggtcA------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668705 5 - 92844088 ggtcA------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96331226 5 + 96509753 ggtcA------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802741 5 - 16982598 ggtcA------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609806 5 - 3785965 ggtcA------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90233477 5 - 90373283 ggtcA------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 135366 5 + 156971 ggtcA------ i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5484317 5 - 5823884 ggtcA------ i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22767102 11 + 22939663 GGTTACAGAGT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e canFam3.chr24 47541615 218 + 47698779 I e mm10.chr2 181726580 110 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16200665 0 + 16356641 C e cebCap1.NW_016107870v1 1061860 0 + 1231380 C e calJac3.chr5 58134965 0 + 159171411 C e aotNan1.NW_018500483v1 2599983 0 + 11732439 C a score=15795.000000 s hg38.chr20_KI270870v1_alt 13671 2 + 183433 CT s panTro5.chr20 66346703 2 + 66533130 CT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025870 2 + 62195757 CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 415395 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109940545 2 - 110113093 CT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668710 2 - 92844088 CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96331231 2 + 96509753 CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802746 2 - 16982598 CT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609811 2 - 3785965 CT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90233482 2 - 90373283 CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 135371 2 + 156971 CT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5484322 2 - 5823884 CT i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22767113 2 + 22939663 CT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47541833 2 + 47698779 CC i canFam3.chr24 I 218 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e mm10.chr2 181726580 110 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16200665 0 + 16356641 C e cebCap1.NW_016107870v1 1061860 0 + 1231380 C e calJac3.chr5 58134965 0 + 159171411 C e aotNan1.NW_018500483v1 2599983 0 + 11732439 C a score=1276389.000000 s hg38.chr20_KI270870v1_alt 13673 206 + 183433 GTGTGTTTTCAGTCTGGGGAGATGTGTCTGCCCATCGAGACTGTGCCCGCTGCCTGTGGGGTTGCAAGGATGTCACCGCACACTCATGGTCGGCCTTCTTTCCTGAGAGTTGCTCTGTCAAGTCTATT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCGCCCTGAGTACCCTGATGTCGCC-A-GCCTGAGGGTACACTGTGGGTGGGCCCCG s panTro5.chr20 66346705 206 + 66533130 GTGTGTTTTTAGTCTGGAGAGATGTGTCTGCCCATCGAGACTGTGCCCGCTGCCTGTGGGGTTGCAAGGATGTCACCCCACACTCACGGTCAGCCTTCTTTCCTGAGAGTTGCTCTGTCAAGTCTATT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCGCCCTGAGTACCCTGATGTCGCC-A-GCCTGAGGGTACACTGGGGGTGGGCCCCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62025872 206 + 62195757 GTGTGTTTCCAGTCTGGAGAGATGTGTCTGCCCATCGAGACTGTGCCCGCTGCCTGTGGGGTTGCAAGGATGTCACCCCACACTCACGGTCGGCCTTCTTTCCTGAGAGTTGCTCTGTCAAGTCTATT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCGCCCTGAGTACCCTGATGTCGCC-A-GCCTGAGGGTACACTGGGGGTGGGCCCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 415397 206 - 578057 GTGTGTTTTCAGTCTGGGGAGATGTGTCTGCCCATCGAGACTGTGCCCGCTGCCTGTGGGGTTGCAAGGATGTCACCCCACACTCACGGTCTGCCTTCTTTCCTGAGAGTTGCTCTGTCAAGTCTATT-------------------------GGTTAGGATAGGAGCCTGGGCAGTCGCCCTGAGTACCCTGATGTCGCC-A-GCCTGAGGGTACACTGTGGGTGGGCCCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109940547 202 - 110113093 GTGTGCTTTCAGTCTGGGGAGATGTGTCTGCCCATCGAGAC--TGCCCGCTGCCTGTGGGGTTGCAACGATGTCACCCCACACTCACAGTCTGCCTTCTTTCATGAGAGTTG--CTGTCAAGTCTGTT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCGCCCCGAGTACCCTGATGTCGCC-A-GCCTGAGGGTACACTGCGGATGGGCCCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668712 206 - 92844088 GTGCGTTTTTAGTCTGGGAAGATGTGGCTGCCCATCGAGACCGTGCCCTCTGCCTGTGGGGTCGCAAGACTGTCACCCCACACTCACAGTCTGCCTTCTTTCATGAGAGTTGCTCTGTCAAGTCTCTT-------------------------GGTTAGGACAGGAGCCTGGGCAGTTGCCCTGAGTACCTTGATGTCGCC-A-GCCTGAGGGTACACGGTGGATGGGCCCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96331233 206 + 96509753 GTGCGTTTTCAGTCTGGGGAGATGTGGCTGCCCATCGAGACCGTGCCCTCTGCCTGTGGGGTCGCAAGACTGTCACCCCACACTCACAGTCTGCCTTCTTTCATGAGAGTTGCTCTGTCAAGTCTCTT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCGCCCTGAGTACCTTGATGTCGCC-A-GCCTGAGGGTACACGGTGGATGGGCCCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802748 206 - 16982598 GTGCGTTTTCAGTCTGGGGAGATGTGGCTGCCCATCGAGACCGTGCCCTCTGCCTGTGGGGTCGCAAGACTGTCACCCCACACTCACAGTCTGCCTTCTTTCATGAGAGTTGCTCTGTCAAGTCTCTT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCGCCCTGAGTACCTTGATGTCGCC-A-GCCTGAGGGTACACGGTGGATGGGCCCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3609813 206 - 3785965 GTGCGTTTTCAGTCTGGGGAGATGTGGCTGCCCATCGAGACCGTGCCCTCTGCCTGTGGGGTCGCAAGACTGTCACCCCACACTCACAGTCTGCCTTCTTTCATGAGAGTTGCTCTGTCAAGTCTCTT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCGCCCTGAGTACCCTGATGTCGCC-A-GCCTGCGGGTACACGGTGGATGGGCCCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90233484 197 - 90373283 GTGCGTTTTCAGTCTGGGGAGATGTGGCTGCCCATCGAGACCGTGCCCTCTGCCTGTGGG---------CTGTCACCCCACACTCACAATCTGCCTTCTTTCATGAGAGCTGCTCTGTCAAGTCTGTT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCGCCCTGAGTACCCTGATGTCGCC-A-GCCTGAGGGTACACGGTGGATGGGCCCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 135373 206 + 156971 GTGCGTTTTCAGTCTGGGGAGATGTGGCTGCCCATCGAGACCGTGCCCTCTGCCTGTGGGGTCGCAAGACTGTCACCCCACACTCACAGTCTGCCTTCTTTCATGAGAGTTGCTCTGTCAAGTCTCTT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCGCCCTGAGTACCCTGATGTCGCC-A-GCCTGCGGGTACACGGTGGATGGGCCCCG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5484324 206 - 5823884 GTGTGTTTTCAGTCTGGGGAGATGTGGCTGCCCATCGAGACCGTGCCCTCTGCCTGTGGGGTCGCAAGACTGTCACCCCACACTCACAGTCTGCCTTCTTTCATGAGAGTTGCTCTGTCAAGTCTGTT-------------------------GGTTAGGACAGGAGCCTGGGCAGTCACCCTGAGTACCCTGATGTCACC-A-GCCTGAGGGCACACTGTGGATGGGCCCCG i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22767115 131 + 22939663 GTGCGTTTTTAGTCTGGGGAGACTTTA-----------------GTCCACTGCCCA-GAGATTGCAAGGCCATCACCGCACACTCTCAGGCCAGCTCCTTTCATGAGAGTCATT--------------------------------------------------GAGCCT--GCAGTCA--------------------------------GGTGAACCTTGGATGGGGCCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181726690 207 + 182113224 GTTTGTTTTCAGCCTCAGGTGATGTGACTGTCCATTGAGGATTTGCCCAGTGCCTTCTGGGGTACAAAGCTATCACCCCATATCCACAGGTCATCTTCTTC--TGTGAGTTACTCTCCCAAGTCTTTTTGTTCCATGCTTTTTTTCTGGGCTGGGTCAGGATAGGAGTATGAACCATGACCCTGAGTGCCTTGAGGTTACTGA-GCCTGA----------------------- i mm10.chr2 I 110 C 0 s canFam3.chr24 47541835 146 + 47698779 GCGTGTTTGCAGCCTGGGGAGACGAGGCTGCCCCC---GGCTGTGCTCCCTTCCCGTG----------------------TCCCCGCGGCCTG------------------------------------------------------------AGTCAGGACAGGAGCCTGGGGAGTGGCCC-ACGCGCCCCGAAACTGCC-AGGCCTGGGGCCACGTCCGGGGTGGCCTCCA i canFam3.chr24 C 0 I 75 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16200665 0 + 16356641 C e cebCap1.NW_016107870v1 1061860 0 + 1231380 C e calJac3.chr5 58134965 0 + 159171411 C e aotNan1.NW_018500483v1 2599983 0 + 11732439 C a score=640510.000000 s hg38.chr20_KI270870v1_alt 13879 114 + 183433 AGCTACCCTTCTATGGGCTGTGCCATGTGGATGTTGAGTCCGGG---------GTCAG-----GGAAC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC---AGTTTGGGGATGGCGGTGGGGGGGATCT s panTro5.chr20 66346911 113 + 66533130 AGCTACCCTTCTATGGGCTGTGCCATGCGGATGTTGAGTCCGGG---------GTCAG-----GGAAC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC---AGTTTGGGGATGGCGGTGGGGGT-ATCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62026078 113 + 62195757 AGCTACCCTTCTATGGGCTGTGCCATGCGGATGTTGAGTCCGGG---------GTCAG-----GGAAC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC---AGTTTGAGGATGGCGGTGGGGGT-ATCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 415603 112 - 578057 AGCTACCCTTCTATGGGCTGTGCCATGTGGATGTTGAGTCCGGG---------GTCAG-----GGAAC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC---AGTTTGGGGATGGCGGTGGGGG--ATCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109940749 114 - 110113093 AGCTACCCTTCCATGGGCTGTGCCATGTGGATGTTGAGTCCAGG---------GTCAG-----GGAGC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC-AGAGTTTGGGGATGG-GGTGGGGGG-ATCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92668918 114 - 92844088 AGCTGCCCTTCCATGGGCTGTGCCATGTGGATGTTGAGTCTGGG---------GTCAG-----GGAGC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC-AGAGTTTGGGGATGGCGGCGGGGG--ATCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96331439 114 + 96509753 AGCTGCCCTTCCATGGGCTGTGCCATGTGGATGTTGAGTCTGGG---------GTCAG-----GGAGC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC-AGAGTTTGGGGATGGCGGCGGGGG--ATCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16802954 114 - 16982598 AGCTGCCCTTCCATGGGCTGTGCCATGTGGATGTTGAGTCTGGG---------GTCAG-----GGAGC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC-AGAGTTTGGGGATGGCGGCGGGGG--ATCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3610019 114 - 3785965 AGCTGCCCTTCCATGGGCTGTGCCATGTGGATGTTGAGTCTGGG---------GTCAG-----GGAGC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC-AGAGTTTGGGGATGGCGGCGGGGG--ATCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90233681 114 - 90373283 AGCTGCCCTTCCATGGGCTGTGCCATGTGGATGTTGAGTCTGGG---------GTCAG-----GGAGC----CCTGCTGAGATATCT-CACACTCCTCTGCAGCC-AGAGTTTGGGGATGGCGGCGGGGC--ATCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 135579 114 + 156971 AGCTGCCCTTCCATGGGCTGTGCCATGTGGATGTTGAGTCTGGG---------GTCAG-----GGAGC----CCTGCTGAGATATCT-CACACTCCTCTTCAGCC-AGAGTTTGGGGATGGCGGCGGGGG--ATCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5484530 114 - 5823884 AGCTACCCTTCCATGGGCTATGCCGTGTGGATGTTGGATCTGGG---------GTCAG-----GGAGC----CCTGCGGAGATATCT-CACACTCCTCTTCAGCC-AGAGTTTGGGGATGGCGGTGGGGG--GTCT i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22767246 134 + 22939663 TGCTCCCCTCCAGTGTCCTGTGCCCTTTGAACATTGAGCTCAGAGATGGGCATGTCAGACTGAGGGGCTGTGCTTGCTGAGGTATCTACACACCACCCTTTAGTTTCGAGATCAGGGACTAAGGTAGGGG--GCCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181726897 82 + 182113224 -------CTATGTTAAGGAATACCAGGTGGGAGC---------A---------GTCAT-----GGATT----CTTCCTTGTGTATAC-TGCACTA-----------AAAGGT--GGATCAGCACTG------GTTA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e canFam3.chr24 47541981 75 + 47698779 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16200665 0 + 16356641 C e cebCap1.NW_016107870v1 1061860 0 + 1231380 C e calJac3.chr5 58134965 0 + 159171411 C e aotNan1.NW_018500483v1 2599983 0 + 11732439 C a score=2194633.000000 s hg38.chr20_KI270870v1_alt 13993 390 + 183433 GTGGGTGTGT---CTCGAGGGAGCGTGGGGCTTGT---AGCCA---------------CAGTTT---GTCACATAAGTGGAGCTTGACGCCCACAAGGTCAGGGGATGG---TGA---TTAGCAGCCGTGAGGAGAGGGTGCATTGGGGCTGAATTTTGTGATTTGGG--GTGTTCGTGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCATGTGGTGGCC----------------------------CAGGCAT---TGACCAGGGTGTGGGCTG-----GGCCAGGCGGTCACTGGTCTTGGCTGGGGAG----------CGGCCGACCATGGCCTCAGCACCGGGCACTGGGAGAATGTCCCAGGCCTGCTGTCACCGAGCTGCTGTCCTGG-GGT--GGGGCTGGCCACGCTGGCCTGAT----------TCTGGGCCTC------ s panTro5.chr20 66347024 417 + 66533130 GTGGGTGTGT---CTCCAGGGAGCGTGGGGCTTGTGGTAGCCA---------------CAGTTT---GTCACATAAGTGGAGCTTGAGGCCCACAAGGTCAGGGGATGG---TGA---TTAGCAGCCGTGAGGAGAGGGTGCATTGGGGCTGAATTTGGTGATTTGGG--GTGTTCGTGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCATGTGGTGGCC----TTGTCCTCCTTGGCCCTAGTGGCCCAGGCAT---TGACCAGGGTGTGGGCTG-----GGCCAGGCGGTCACTGGTCTTGGCTGGGGAG----------CGGCCGACCATGGCCTCAGCACCGGGCACTGGGAGAATGTCCCAGGCCTGCTGTCACTGAGCTGCTGTCCTGC-GGT--GGGGCTGGCCATGCTGGCCTGAT----------TCTGGGCCTC------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62026191 401 + 62195757 GTGGGTGTGT---CTCCAGGGAGCGTGGGGCTTGTGGTAGCCA---------------CAGTTT---GTCACATAAGTGGAGCTTGAGGCCCACAAGGTCAGGGGATGG---TGA---TTAGCAGCCGTGAGGAGAGGGTGCATTGGGGCTGAATTTGGTGATTTGGG--GTGTTCGTGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCATGTGGTGGCC----TTGTCCTCCTTGGCCCTAGTGGCCCAGGCAT---TGACCAGGGTGTGGGCTG-----GGCCAGGCGGTCACTGGTCTTGGCTGGGGAG----------CGGCCGACCATGGCCTCAGCACCGGGCACTGGGAGAATGTCCCAGGCCTGCTGTCACTGAGCTGCTGTCCTGC-GGT--GGGGCTGGCCATGCTGG-------------------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 415715 401 - 578057 GTGGGTGTGT---CTCGAGGGAGCGTGGGGCTTGTGGTAGCCA---------------CAGTTT---GTCACATAAGTGGAGCTTGAGGCCCACAAGGTCAGGGGATGG---TGA---TTAGCAGCCGTGAGGAGAGGGTGCATTGGGGCTGAATTTTGTGATTTGGG--GTGTTCATGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCATGTGGTGGCC----TTGTCCTCCTTGGCCCTAGTGGCCCAGGCAT---TGACCAGGGTGTGGGCTG-----GGCCAAGCGGTCACTGGTCTTGGCTGGGGAG----------CGGCCGACCATGGCCTCAGCACCGGGCACTGGGAGAATGTCCCAGGCCTGCTGTCACTGAGCTGCTGTCCTGC-AGT--GGGGCTGGCCATGCTGG-------------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109940863 399 - 110113093 GT-GGTGTGT---CTCGAGGGAGTGTGGGGCTTGTGGTAGCCA---------------CAGTTT---GTCACATAAGTGGAGTTCGAGGCCCACAAGGTCAGGCGATGG---TGG---TCAGCAGCCGTGAGGAGGGGCTGCACTGGGGCTGAATTTTGTGATTTGGG--GTGTTCGTGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACTAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCATGTGGTGACC----TTGTCCTCCTTGGCCCTGGTGGCCCAGGCAT---TGACCAGGGTGTGGGCTG-----GGCCAGGCGGTCACTGGTCTTGGCTGGGGAG----------CGGCCAACCATGGCCTCAGCACCGGGCACTGGGAGAATGTCCCAGGCCTGCTGTCACCGAGCTGTTGTCCTGG-GGT--GCGGCTGGCCACGCTG--------------------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92669032 406 - 92844088 ACGGGTGTGT---CTCGAGGGAGCCTGGGGCTGGTGGTAGCCA---------------CAGTTC---GTCACATTCATGGAGCTTGAGGCCCACAAGGTC-GGGGATGG---TGG---TCAGCAGCCATGAAGAGAGGCTGCATTGGGGATGAATTTTGTGATTCGGG--GTGTTCATGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCATGTGGTGGCC----TCGTCCTCCTTGGCCCTAGTGGCCCAGGCAT---TGACCAGGGTGTAGGCTG-----GGCCAGGCGGTCACTGGTCCTGGCTGGGGAG----------CGACCGACCATGGCCTCAGCACTGGGCACTGGGAGAATGTCCCAGGCCTGGTGTCACCGAGCTGCTGTCCTGG-GGT--GGGGCTGGCCACACTGGCCTGAT-------------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96331553 416 + 96509753 ACGGGTGTGT---CTCGAGGGAGCCTGGGGCTGGTGGTAGCCA---------------CAGTTC---GTCACATTCATGGAGCTTGAGGCCCACAAGGTC-GGGGATGG---TGG---TCAGCAGCCATGAAGAGAGGCTGCATTGGGGATGAATTTTGTGATTCGGG--GTGTTCATGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCATGTGGTGGCC----TCGTCCTCCTTGGCCCTAGTGGCCCAGGCAT---TGACCAGGGTGTAGGCTG-----GGCCAGGCGGTCACTGGTCTTGGCTGGGGAG----------CGACCGACCATGGCCTCAGCACTGGGCACCGGGAGAATGTCCCAGGCCTGGTGTCACCGAGCTGCTGTCCTGG-GGT--GGGGCTGGCCACACTGGCCTGATTCTGGGCCTC---------------- i macFas5.chr10 C 0 T 65 s macNem1.NW_012014244v1 16803068 406 - 16982598 ACGGGTGTGT---CTCGAGGGAGCCTGGGGCTGGTGGTAGCCA---------------CAGTTC---GTCACATTCACGGAGCTTGAGGCCCACAAGGTC-GGGGATGG---TGG---TCAGCAGCCATGAAGAGAGGCTGCATTGGGGATGAATTTTGTGATTCGGG--GTGTTCATGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCATGTGGTGGCC----TCGTCCTCCTTGGCCCTAGTGGCCCAGGCAT---TGACCAGGGTGTAGGCTG-----GGCCAGGCGGTCACTGGTCTTGGCTGGGGAG----------CGACCGACCATGGCCTCAGCACTGGGCACTGGGAGAATGTCCCAGGCCTGGTGTCACCGAGCTGCTGTCCTGG-GGT--GGGGCTGGCCACACTGGCCTGAT-------------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3610133 406 - 3785965 ACGGGTGTGT---CTCGAGGGAGCCTGGGGCTGGTGGTAGCCA---------------CAGTTC---GTCACATTCGTGGAGCTTGAGGCCCACAAGGTC-GGGGATGG---TGG---TCAGCAGCCATGAAGAGAGGCTGCATTGGGGATGAATTTTGGGATTCGGG--GTGTTCGTGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCATGTGGTGGTC----TCGTCCTCCTTGGCCCTAGTGGCCCAGGCAT---TGACCAGCGTGTAGGCTG-----GGCCAGACGGTCACTGGTCTTGGCTGGGGAG----------CGACCGACCATGGCCTCAGCACTGGGCACTGGGAGAATGTCCCAGGCCTGGTGTCACCGAGCTGCTGTCCTAG-GGT--GGGGCTGGCCACACTGGCCTGAT-------------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90233795 408 - 90373283 ACGGGTGTGT---CTGGAGGGAGCCTGGGGCTGGTGGTCGCCA---------------CAGTTC---GTCACATTTGTGGAGCTTGAGGCCCACACGGTC-GGGGATGG---TGGTGATTAGCAGCCATGAAGGGAGG-TGCACTGGGGCTGAATTTTGTGATTCGGG--GTGTTCGTGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACCCAGAGAGGC-CAGGCCTGGCATGTGGTGGCC----TCGTCCTCCTTGGCCCTAGTGGCCCAGGCAT---TGACCGGGGTGTAGGCTG-----GGCCAGGCGGTCACTGGTCTTGGCTGGGGAG----------CGACCGACCATGGCCTCAGCACTGGCCACTGGGAGAACGTCCCAGGCCTGGTGGCACCGAGCTGCTGTCCTGG-GGT--GGGGCTGGCCACACTGGCCTGAT-------------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 135693 406 + 156971 ACGGGTGTGT---CTCGAGGGAGCCTGGGGCTGGTGGTAGCCA---------------CAGTTC---GTCACATTCGTGGAGCTTGAGGCCCACAAGGTC-GGGGATGG---TGG---TCAGCAGCCATGAAGAGAGGCTGCATTGGGGATGAATTTTGGGATTCGGG--GTGTTCGTGGGGT----CGGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCGTGACACAGAGAGGC-CAGGCCTGGCAAGTGGTGGCC----TCGTCCTCCTTGGCCCTAGTGGCCCAGGCAT---TGACCAGGGTATAGGCTG-----GGCCAGGCGGTCAATGGTCTTGGCTGGGGAG----------CGACCGACCATGGCCTCAGCACTGGGCACTGGGAGAATGTCCCAGGCCTGGTGTCACCGAGCTGCTGTCCTGG-GGT--GGTGCTGGCCACACTGGCCTGAT-------------------------- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5484644 406 - 5823884 ACGGGTGTGT---CTCGACGGAGCCTGGGGCTGGTGGTAGCCA---------------CAGTTC---GTCCCATTCGTGGAGCTTGAGGCCCCTGAGGTC-GGGGATGG---TGG---TTAGCAGCCATGAAGAGAGGCTGCATTGGGGCTGAATTTTGTGATTCGGG--GTGTTTGTGGGGT----CAGGAG----GGG-------TCAGTTCACAGCTCCTGGAAACCAGAGGCATGACACAGAGAGGC-CAGGCCTGGCATGTGGTGTCC----TCGTCCTCCTTGGCCCTAGTGGCCCAGCCAT---TGACCAGGGTGTAGGCTG-----GGCCAGGCGGTCACTGGTCTTGGCTGGGGAG----------CGACCGACCATGGCCTCAGCACTGGGCACTGGGAGAATGTCCGAGGCCTGGTGTCACCGAGCTGCTGTCCTGG-GGT--GGGGCTGGCCACACTGGCCTGAT-------------------------- i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22767380 342 + 22939663 CTAAGTGGGTGGCCACCAGGGAATGTGGAGCTTGTGTTATCCA-----------------------------GTAGGAGGAGACTGAAGCTCC-----TT-GCCTAAGG---TTA--------------GGGGAGAGGTTGTGTTGGGGCTAAATTTTGTGATTGGGGT-GTGTTTGTGGGGT----GGGACA----GAGATGCAGCTCAATTC-TTGCTCCTGGACACCAGAGAGGCAACAGAGAGAGGTACAGGCTTGGTGCATGGTGGCCTCCCTCATCCTCCTCAACCCCTGTGGCCCAGGGGTCTGCAACCAG------AGCTG-----GACC-----------GGTCTTGGCTGGAGAGTGA------ATGACTGACCACAGCCCCAGCATAGTGTACC-------------------------------CAGCTGTCCTAGCGGT--GGGGCTGACCA-------------------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181726979 283 + 182113224 GTAGGTATTT---CTGGAGGAG-----------------------------------------C---ATTTCACTTAGAGAGACTGAGGCCTCTGAGGTCAACCAACAGACATGG---TTAGCAACTATGAGGAAAGTCTTTATT-AAGTTGAATTTAATGAGTTGGGGAGTGCTTGTGGGATAAAACAGAGGTATTGGG-------TCTGTTCAGAGTTA--GGAAACCAGAGATGTGACA-----GTTT-CAGACCTG-----TGTCGGGC----------------------------------T-------------------------------------------------------------------TGACTGATTTCGGATTCTTCCCCTGGCAAAAGGGGGTGGTT--AGATCTTCTGTCATCTAGTTTGTGTCCTGA-------------GTCTTCCTC--------------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47542056 379 + 47698779 GCTGGCGCGT---GTCTGGTGAGCGTGAGGCC--CTGTAGCTAGCGCTCACTTTGGGACAATTCACTGTCCTACACGAACACCCTCAAATTTCACAGATT-TGAAAGAG---GAA---ATTCTGTTCAAGATGCGAGGGAGCAGT-GTCCTTGCCTCTGTGAGGCCGC--CTGGGCCTGGG------CTGCAG----GGA-------GCGGCTCTCTGGCCTGGGCGGGAGGGCGGGGGCCACCGGGTGCC-CAGGCTGAGC---CGGCGGAG----T-----------------------CAGGCCG---TGTGCACGGGGTGGGGGGGAGGAGGCCGAGAAGCC-----------CTGGGGTGCTCCTTCCTACGATCGATCGGGGCCGGACCTCTTGGT-TTGGGCGTATTTGCGGG-------------------------TGG-GGTGAGGGGCTGAGCCCCACAACCTGCC--------------------TGTGGA i canFam3.chr24 I 75 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16200665 0 + 16356641 C e cebCap1.NW_016107870v1 1061860 0 + 1231380 C e calJac3.chr5 58134965 0 + 159171411 C e aotNan1.NW_018500483v1 2599983 0 + 11732439 C a score=1761.000000 s hg38.chr20_KI270870v1_alt 14383 6 + 183433 CCTGGG s panTro5.chr20 66347441 6 + 66533130 CCTGGG i panTro5.chr20 C 0 C 0 s mm10.chr2 181727262 6 + 182113224 CCTGTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47542435 3 + 47698779 ---GGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e cerAty1.NW_012001373v1 3610539 0 - 3785965 C e colAng1.NW_012114444v1 5485050 0 - 5823884 C e chlSab2.chr2 90234203 0 - 90373283 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e panPan2.chr20 62026592 0 + 62195757 C e gorGor5.CYUI01015848v1 416116 0 - 578057 C e manLeu1.NW_012101369v1 136099 0 + 156971 C e saiBol1.JH378156 16200665 0 + 16356641 C e macNem1.NW_012014244v1 16803474 0 - 16982598 C e cebCap1.NW_016107870v1 1061860 0 + 1231380 C e calJac3.chr5 58134965 0 + 159171411 C e aotNan1.NW_018500483v1 2599983 0 + 11732439 C e nomLeu3.chr13 109941262 0 - 110113093 C e rheMac8.chr10 92669438 0 - 92844088 C e otoGar3.GL873542 22767722 0 + 22939663 C e macFas5.chr10 96331969 65 + 96509753 T a score=2005458.000000 s hg38.chr20_KI270870v1_alt 14389 426 + 183433 GGCCTGCTGTCACCGAGCTGCTGTCCTGGGGTGGGGCTGG-CCACAC---TG-CCTG--ACTCTGGGCCT---------CCCTGGGGGCATTGCTGGGGG--CCTCTCCCTT-CCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---CGGTGCCTTCCTCTGCCCCCCAGGGCTGGCTGGCAGCCTGCCCAGTG-----------ACCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTGCTGGTCTTTGCC----CTG---CAGGATACC-GACTGCCACCCACACCTTCTTCAGAGCAGGGTGTTCCAGGAGGGTCTTCCCTTAAGCC-------TCAGTAGTGG-GGAGCCCAGTGTCAGAG-GCA-----------------------TCCCTCAGAGCACAGAATCTTCCCATGCAAAGATCCCAC--TGTGTGTCTGGCTTCCTCTGAAGCCAACCACGAGTCTGGGTCCTC--TTCCCTCCACCGGTATCTGG-TGAG s panTro5.chr20 66347447 427 + 66533130 GGCCTGCTGTCACCGAGCTGCTGTCCTGCGGTGGGGCTGG-CCATGC---TGGCCTG--ATTCTGGGCCT---------CCCTGGGGGCATTGCTGGGGG--CCTCTCCCTT-CCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---CGGTGCCTTCCTCTGCCCCCCAGGGCTGGCTGGCAGCCTGCCCAGTG-----------ACCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTGCTGCTCTTTGCC----CTG---CAGGATACC-GACTGCCACCCACACCTTCTTCAGAGCAGGGTGTTCCAGGAGGGTCTTCCCTTAAGCC-------TCAGTAGTGG-GGAGCCCAGTGTCAGAG-GCA-----------------------TCCCTCAGAGCACAGAATCTTCCCATGCAAAGATCCCAC--TGTGTGTCTGGCTTCCTCTGAAGCCAACCACGAGTCTGGGTCCTC--TTCCCTCCACCGGTATCTGG-TGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62026592 378 + 62195757 -----------------------------------------------------CCTG--ATTCTGGGCCT---------CCCTGGGGGCATTGCTGGGGG--CCTCTCCCTT-CCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---CGGTGCCTTCCTCTGCCCCCCAGGGCTGGCTGGCAGCCTGCCCAGTG-----------ACCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTGCTGCTCTTTGCC----CTG---CAGGACACC-GACTGCCACCCACACCTTCTTCAGAGCAGGGTGTTCCAGGAGGGTCTTCCCTTAAGCC-------TCAGTAGTGG-GGAGCCCAGTGTCAGAG-GCA-----------------------TCCCGCAGAGCACAGAATCTTCCCATGCAAAGATCCCAC--TGTGTGTCTGGCTTCCTCTGAAGCCAACCACGAGTCTGGGTCCTC--TTCCCTCCACCGGTATCTGG-TGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 416116 378 - 578057 -----------------------------------------------------CCTG--ATTCTGGGCCT---------CCCTGGGGGCATTGCTGGGGG--CCTCTCCCTT-CCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---CAGTGCCTTCCTCTGCCCCCCAGGGCTGGCTGGCAGCCTGCCCAGTG-----------ACCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTGCTGCTCTTTGCC----CGG---CAGGACACC-GACTGCCACCCACACCTTCTTCAGAGCAGGGTTTTCCAGGAGGGTCTTCCCTTAAGCC-------TCAGTAGTGG-GGAGCCCAGTGTCAGAG-GCA-----------------------TCCCTCAGAGCACAGAATCTTCCCATGCAAAGATCCCAC--TGTGTGTCTGGCTTCCTCTGAAGCCAGCCACGAGTCTGGGTCCTC--TTCCCTCCACCGGTATCTGG-TGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109941262 379 - 110113093 -----------------------------------------------------CCTG--ACTCTGGGCCT---------CCCTGGGGGCGTTGCTGGGGG--CCTCTCCCTT-CCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---CGGTGCCTTCCTCTG-CCCCCAGGGCTGGCCGGCAGCCTGCCCAGTG-----------ACCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTCCTGCTCTTTGCC----CTG---CAGGACACC-GACTGCCACACACACCTTCTTCAGAGCAGGGTGTTCCAGGAGGGTCTTCCCTTAAGCC-------TCAGTAGTGG-GGAGCCCAGTGTCAGAG-GCA-----------------------TCCCTCAGAGCACAGAATCTTCCCATGCAAAGATCCCAC--TGTGCGTCTGGCTTCCTCTGAAGCCAACCACGAGTCTGGGCCCTCTTTTCGCTCCACCGGTATCTGG-TGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92669438 374 - 92844088 -------------------------------------------------------------TTTGGGCCT---------CCCTGGGGGCGTTGCTGGGGG--CCTCTCCCTTCCCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---TGACACCTTCCTCTGCCCCCCAGGGCCGGCTGGCAGCGTGCCCAGTG------------CCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTCCTGCTCTTTGCC----CTG---CAGGACACC-GACTGCCACCCGCACCTTCTTCAGAGCAGGGTGTTCCAGGAGGATCTTCCCTTAAGCC-------TCAGTAGTGG-GGAGCCCAGTGTCAGAG-GCA-----------------------CCCCTCAGAGTACAGAATCTTCCCATGCGAAGGTCCCAC--TGTGTGTCTGGCTTCCTCTGAAGCCAACCACGAGTCTGGGTCCTCTTTTCACTCCACCGGTGTCTGG-TGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96331904 428 + 96509753 GGCCTGGTGTCACCGAGCTGCTGTCCTGGGGTGGGGCTGG-CCACAC---TGGCCTG--ATTCTGGGCCT---------CCCTGGGGGCGTTGCTGGGGG--CCTCTCCCTTCCCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---TGATACCTTCCTCTG-CCCCCAGGGCCGGCTGGCAGCGTGCCCAGTG------------CCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTCCTGCTCTTTGCC----CTG---CAGGACACC-GACTGCCACCCGCACCTTCTTCAGAGCAGGGTGTTCCAGGAGGATCTTCCCTTAAGCC-------TCAGTAGTGG-GGACCCCAGTGTCAGAG-GCA-----------------------CCCCTCAGAGTACAGAATCTTCCCATGCGAAGGTCCCAC--TGTGTGTCTGGCTTCCTCTGAAGCCAACCACGAGTCTGGGTCCTCTTTTCACTCCACCGGTGTCTGG-TGAC i macFas5.chr10 T 65 C 0 s macNem1.NW_012014244v1 16803474 374 - 16982598 -------------------------------------------------------------TCTGGGCCT---------CCCTGGGGGCGTTGCTGGGGG--CCTATCCCTTCCCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---TGATACCTTCCTCTGCCCCCCAGGGCCGGCCGGCAGCGTGCCCAGTG------------CCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTCCTGCTCTTTGCC----CTG---CAGGACACC-GACTGCCACCCGCACCTTCTTCAGAGCAGGGTGTTCCAGGAGGATCTTCCCTTAAGCC-------TCAGTAGTGG-GGAGTCCAGTGTCAGAG-GCA-----------------------CCCCTCAGAGCACAGAATCTTCCCATGCGAAGGTCCCAC--TGTGTGTCTGGCTTCCTCTGAAGCCAACCACGAGTCTGGGTCCTCTTTTCACTCCACCGGTGTCTGG-TGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3610539 374 - 3785965 -------------------------------------------------------------TCTGGGCCT---------CCCTGGGGGCGTTGCTGGGGG--CCTCTCCCTTCCCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---TGATACCTTCCTCTGCCCTCCAGGGCCGGCTGGCAGCGTGCCCAGTG------------CCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTCCTGCTTTTTGCC----CTG---CAGGACACC-GACTGCCACCCGCACCTTCTTCAGAGCAGGGTGTTCCAGGAGGATCTTCCCTTAAGCC-------TCAGTAGTGG-GGAGCCCAGTGTCAGAG-GCA-----------------------TCCCTCAGAGTACAGAATCTTCCCATGCGAAGGTCCCAC--TATGTGTCTGGCTTCCTCTGAAGCCAACCACGAGTCTGGGTCCTCTTTTCACTCCACCGGTGTCTGG-TGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90234203 397 - 90373283 -------------------------------------------------------------TCCGGGCCT---------CCCTGGGGGCGTTGCTGGGGG--CCTCTCCCTTCCCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GGGC---TGATACCTTCCTCTGCCCCCCAGGGCCAGCTGGCAGCGTGCCCAGTG------------CCCCCGTGTGGCCTGAGCTCTGGGCACCC-----CTCCTGCTCTTTGCC----CTG---CAGGACACC-AACTGCCACCCCCACCTTCTTCAGAGCAGGGCGTTCCAGGAGGGTCTTCCCTTAAGCC-------CCAGTAGCGG-GGAGCCCAGTGTCAGAG-GCATCCCTCAGCCAGTGTCAGAGGCGTCCCTCAGAGCACAGAATCTTCCCATGCAAAGGTCCCAC--CATGTGTCTGGCTTCTTCTGAAGCCAACCACGAGTCTGGGTCCTCTTTTCACTCCACCGGTGTCTGG-TGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 136099 374 + 156971 -------------------------------------------------------------TCTGGGCCT---------CCCTGGGGGCGTTGCTGGGGG--CCTCTCCCTTCCCATGCATTTTGGAAGGGGCCCA-GGCTA-------------------GTGC---TGATACCTTCCTCTGCCCTCCAGGGCCGGCTGGCAGCGTGCCCAGTG------------CCCTCGTGTGGCCTGAGCTCTGGGCACCC-----CTCCTGCTCTTTGCC----CTG---CAGGACACC-GACTGCCACCCGCACCTTCTTCAGAGCAGGGTGTTCCAGGAGGATCTTCCCTTAAGCC-------TCAGTAGTGG-GGAGCCCAGTGTCAGAG-GCA-----------------------TCCCTCAGAGTACAGAATCTTCCCATGCGAAGGTCCCAC--TGTGTGTCTGGCTTCCTCTGAAGCCAACCACGAGTCTGGGTCCTCTTTTCACTCCACCGGTGTCTGG-TGAC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5485050 351 - 5823884 -------------------------------------------------------------TCTGGGCCT---------CCCTGGGGGCATTGCTGGGGG--CCTCTCCCTTCCCATGCATTTTGGGAGGGGCCCA-GGCTA-------------------GTGC---TGATACCTTCCTCTG-------------------------CCCAGTG------------CCCCCGTGTGGCCTGAGCTCTTGGCACCC-----CTCCTGCTCTTTGCC----CTG---CAGGACACC-GACTGCCACCCACACCTTTTTCAGAGCAGGGTGTTCCAGGAGGGTCTTCCCTTAAGCC-------TCAGGAGTGG-GGAACCCAGTGTCAGGG-GCA-----------------------TCCCTCAGACTACAGAATCTTCCCATGCAAAGGTCCCACCGTGTGTGTCTGGCTTCCTCTGAAGCCAACCATGAGTCTGGGTCCTCTTTTCACTCCACCGGTGTCTGG-TGAC i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22767722 348 + 22939663 --------------------------------------------CAT--GTAGCTTC--ACTCTGGGCCT---------CCCTGGGGGAGATGCTAGAGGACCCTGTTGCTTCCTGTGCCTCCTAGAAGGGACCCAGGGCTA-------------------CAGC---TGGCCTCTCTGCCTAGATCCCTGTGCTGCCTTGA-----GCCCAGAGCCTGATATCACACTCTCTCTAGAGCTGGACTCT----------------CTGCT-TAGGCC----TTGAGCCTGGGGCCT-GA-----GCCCACACTTTCTCTAGAGCTGGTTGTTCCAGATGGGATTTTCCTCAAACC-------CTAGGAGGGGAGGAGCTCAGATTCAAAG-AAG------------------------------------AGAATCACTCCCTTAGGGTCTCTCAT--GATCAGT------------------------AAGTCTGGGACCCTCCTTTATTCCACCAGTGTCTGGCTGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181727268 276 + 182113224 -----------------------------------------------------------AATCTTGTCAG---------C----AAGGAACTGGCCAGTG---CTCCCTGTTGTCATCATTACTGGCAAAGGCAGA-GG-------------------------------------TCCTTTACATC----------------------------------------TCTTCTTG----CTCAACTTTACACACAC-----TAAATACCTCACTCC----CCA---T-----------------------CCTTTTCCAGAGCTTGTTATTCTAGGA-TATCTTCCCTCTAGTC-------CAGGAGGGGA-GTGGACTAGTATTAGAATGCA-----------------------TTCTTGAGAGTATAGAACCCTCTCTC----ATCTTCCAC--CAGACTCCTGACTCCCATT--AGCCAAC------TCT----------TTCACCTCACTAGTAGTCAG----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47542438 404 + 47698779 --------------GGGCAGCCGGCCCGGCGGGTGTGTGGACTGTACTGAGAGGCTGGCGCGCTGGGCCTGGTCCCCGACCTGGGGAGGGGTGCGGGGGG----TCCCCTTCCCTGCTCACCTAGGA---GGCCCG-GGCTCCACTCGCCGTAGCTAATCTGTGCGCGTGCTGTCTTGCCCTGAGCCCGGGCCCTGGGTGGGGGT--------TG-----------GTCCCAGGAAAGCCTGCCCCCGAGGGACCCTCGCGCTCCTGCTTTGCCCCAGGGCAG---CGGGACACCAGACACCTCCCCAGACTTCCTCTAGAGCCGGTCAATCCAGGCAGGGCTTTCCTCGAGCCCTTGGGGTCAGGGGGGA-GCAGCCCAGGCTCAGAG-GTT-----------------------CG-----------AGAACCT---CGTG-GGCTTTCCCAC--TGTGCCTCGGGCTCCCTCGGAGGCAAAC-------CTGGG-------------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16200665 0 + 16356641 C e cebCap1.NW_016107870v1 1061860 0 + 1231380 C e calJac3.chr5 58134965 0 + 159171411 C e aotNan1.NW_018500483v1 2599983 0 + 11732439 C a score=1814646.000000 s hg38.chr20_KI270870v1_alt 14815 177 + 183433 TCTGGGAATCGGAGCCCCTCCCAGACTCTAGCTCTGCTCTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----ACCGCCCGCCGGTCACATTGGAGGTGGGGTG-----------------CGCATGATGGAAGGG-------ATGGGGACCCTGAGG-----GCAGTGGGGATGGGG--GAGACTG----------C-------------CAGGTGCTGAG----------CTCAGGACCC s panTro5.chr20 66347874 177 + 66533130 TCTGGGAATCGGAGCCCCTCCCAGGCTCTAGCTCTGCTCTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----GCCGCCCGCCGGTCACATTGGAGGTGGGGTG-----------------GGCATGATGGAAGGG-------ATGGGGACCCTGAGG-----GCAGTGGGGATGGGG--GAGACTG----------C-------------CAGGTGCTGAG----------CTCAGGACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62026970 177 + 62195757 TCTGGGAATCGGAGCCCCTCCCAGGCTCTAGCTCTGCTCTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----GCCGCCCGCCGGTCACATTGGAGGTGGGGTG-----------------GGCATGATGGAAGGG-------ATGGGGACCCTGAGG-----GCAGTGGGGATGGGG--GAGACTG----------C-------------CAGGTGCTGAG----------CTCAGGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 416494 177 - 578057 TGTGGGAATCGGAGCCCCTCCCAGACTCTAGCTCTGCTCTCCTGAGCCTGTCTTGAAGGCTGGTCTGGCACC-----ACCGACCGCCGGTCACATtggaggtggggtg-----------------ggcatgatggaaggg-------atggggaccctgagg-----gcagtggggatgggg--GAGACTG----------C-------------CAGGTGCTGAG----------CTCAGGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109941641 176 - 110113093 TCTGGGAATCTGAGCCCCTCCCAGACTCTAGCTCTGCTCTCCCGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----A-CACCCGCCAGTCACATTGGAGGTGGGCTG-----------------CGCATGATGGAAGGG-------ATGGGGACCCTGAGG-----GCAGTGGGGTTGGGG--GAGACTG----------C-------------CAGGTGCTGAG----------CTCAGGACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92669812 177 - 92844088 TCGGGGAATCTGAGCCCCTCCCAGACTCTACCTCTGCTCTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----ACAGCCCGCCGGTCACATtggaggtggggtg-----------------ggcatgatggaaggg-------atggggaccctgagg-----gcagtggggatgggg--GAGATTG----------C-------------CGGGTGCAGAG----------CTCAGGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96332332 177 + 96509753 TCGGGGACTCTGAGCCCCTCCCAGACTCTACCTCTGCTCTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----ACAGCCCGCCGGTCACATTGGAGGTGGGGTG-----------------GGCATGATGGAAGGG-------ATGGGGACCCTGAGG-----GCAGTGGGGATGGGG--GAGACTG----------C-------------CGGGTGCAGAG----------CTCAGGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16803848 177 - 16982598 TCGGGGAATCTGAGCCCCTCCCAGACTCTACCTCTGCTCTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----ACAGCCCGCCGGTCACATtggaggtggggtg-----------------ggcatgatggaaggg-------atggggaccctgagg-----gcagtggggatgggg--GAGACTA----------C-------------CGGGTGCAGAG----------CTCAGGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3610913 177 - 3785965 TCTGGGAATCTGAGCCCCTCCCAGACTCTACCTCTGCTCTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----ACAGCCCGCCGGTCACATtggaggtggggtg-----------------ggcatgatggaaggg-------atggggaccctgagg-----gcagtggggatgggg--GAGACTG----------C-------------CAGGTGCAGAG----------ATCAGGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90234600 177 - 90373283 TCTGGGAATCTGAGCCCCTCCCAGACTCTACCTCTGCTCTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----ACAGCCCGCCGGTCACATtggaggtggggtg-----------------ggcatgatgcaaggg-------atggggaccctgagg-----gcagtggggatgggg--GAGACTG----------C-------------CGGGTGCGGAG----------CTCAGGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 136473 177 + 156971 TCTGGGAATCTGAGCCCCTCCCAGACTCTACCTCTGCTCTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----ACAGCCCGCCGGTCACATTGGAGGTGGGGTG-----------------GGCATGATGGAAGGG-------ATGGGGACCCTGAGG-----GCAGTGGGGATGGGG--GAGACTG----------C-------------CGGGTGCAGAG----------ATCAGGACCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5485401 175 - 5823884 TCTGGGAATCTGAGCCCCTCCCAGACTCTACCTCTGCACTCCTGAGCCTGTCCTGAAGGCTGGTCTGGCACC-----ACAGCCCGCCGGTCACATTGGAGGTGGGGTG-----------------GGCATGAAGGAAGGG-------ATGGGA--CCTGAGG-----GCAGTGGGGATGGGG--GAGACTG----------C-------------CGGGTGCAGAG----------CTCAGGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58134965 152 + 159171411 tctggaactctgagcccctcccagactcTACCTCTGCTCTCCTGAGACTGTCCTG----------------------------AGCCGGTCTCATTGGAGGTGGGGTG-----------------GG-ATGATGGGAAGG-------ATGGGGATACTGAGG-----GCAGTGGGGATGGGG--GAGACGG------------------------TGGGTGCTGAG----------CTCAGGACCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200665 173 + 16356641 tctgggactctgagcccctcccagactctacctctgctctcctgagcttgtcctgagggctgggCTGGCACC-----ACGGCCAGCCGGTCTCATTGGAGGTGCGGTG-----------------GG-ATGATGGGAAGG-------ATGGGGACACTGAGG-----GCAGTGGGG-TGGGG--GAGGCGG------------------------CGGGTGCTGAG----------CTCAGGA-CC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1061860 174 + 1231380 tctgggactctgagccccttccagactctacctctgctctcctgagcctgtcctgagggctgggCTGGCACC-----ACAGCCAGCTGGTCTCATTGGAGGTGGGGTG-----------------GG-ATGATGGGAAGG-------ATAGGGACACTGAGG-----GCAGTGGGA-TGGGG--GAGGCGG------------------------CGGGTGCTGAG----------CTCAGGACCC i cebCap1.NW_016107870v1 C 0 I 10 s aotNan1.NW_018500483v1 2599983 174 + 11732439 tctgggactctgagcccctcccagactctacctctgctctcctgagcctgtcctgagggctgggCTGGCACC-----ACAGCCAGCCGGTCTCATTGGAGGTGGGGTG-----------------GG-ATGACGGGAAGG-------ATGGGGACACTGAGG-----GCAGTGGGG-ATGGG--GCGGCGG------------------------CAGGTGCTGAG----------CTCAGGAGTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22768070 210 + 22939663 TTGGGGACCATGAGCCCTAACTAGGTTTTGTCTCTGTGCTTCTAAGCCTATCTTAAGGGCTGGTCTGGCTCCTTGTTAAGGAGGGATGGGTACCCTGGGGGTGGGAGGTACAGGAACCCTGGGGAGGGGGGATGGTAGGG-------GTGGGGACCTTTGTA-----GCAGCAGGG--TAGG--GAAACTG----------AGGGGCACCGGAGGTGGGCGCTGTA----------CTTAGGACTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181727544 203 + 182113224 CCCAGTATAAAAGTCCCCTCCCAGACT-----TCTTTCTTCCTGAGCCTGGCTTAGTGAGTGTCCTGGCTCC-----TCACCAAGCCTGTTCTCTTGGAAGTGGGGAA-----------------AAAAGGAGGAACAAGTATGGTCACGGGGGCCCTGTGGTACGAGAAGAAGGGCTGGGGCTGGGAATGAT---GTGGAT-------------TGGGTACTGAGGGTTATAAAATGTAGGATCT i mm10.chr2 C 0 I 14 s canFam3.chr24 47542842 166 + 47698779 CCTGGGGTGCTGAGCCCCTCGCACA-GCTGCCTGTGCTCTCCTGAGTCCGTCCTGG-----GGCCCGGCTCC--------------------CACCGGGAGTGGGATG-----------------GGGGTGGCAGAGGGG-------AAGGCGGGGCCGGGG-----GCAGCGGGGCTGAGG--GAGGTCGAGGCAGCGGGG-------------TAGGTGCTTAG----------CTCGTGGCCG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=99813.000000 s hg38.chr20_KI270870v1_alt 14992 13 + 183433 CGGGGAGGCCGGC s panTro5.chr20 66348051 13 + 66533130 CGGGGAGGCCGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027147 13 + 62195757 CGGGGAGGCCGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 416671 13 - 578057 CGGGGAGGCCGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109941817 13 - 110113093 CGGGGAGGCCGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92669989 13 - 92844088 CGGGGAGGCCGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96332509 13 + 96509753 CGGGGAGGCCGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804025 13 - 16982598 CGGGGAGGCCGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611090 13 - 3785965 CAGGGAGGCCGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90234777 13 - 90373283 CGGGGAGGCCGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 136650 13 + 156971 CAGGGAGGCTGGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5485576 13 - 5823884 CGGGGAGGCCGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135117 12 + 159171411 -CGGGGGGCCAGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200838 12 + 16356641 -CGTGGTGCCAGC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2600157 11 + 11732439 --CGGGGGCCAGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22768280 12 + 22939663 -TGGGAAGCCGGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181727761 9 + 182113224 ---CGAGGCTGC- i mm10.chr2 I 14 C 0 s canFam3.chr24 47543008 13 + 47698779 GGCAGGGCCCGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e cebCap1.NW_016107870v1 1062034 10 + 1231380 I a score=580156.000000 s hg38.chr20_KI270870v1_alt 15005 58 + 183433 TGGAGGTGTCAGGTCCTCCTGG-------CC--------------------ACAAAAGCAGCAGC---CCCAGGGGCCTTTTCCTCCT s panTro5.chr20 66348064 58 + 66533130 TGGAGGTGTCAGGTCCTCCTGG-------CC--------------------ACAAAAGCAGCAGC---CCCAGGGGCCTTTTCCTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027160 58 + 62195757 TGGAGGTGTCAGGTCCTCCTGG-------CC--------------------ACAAAAGCAGCAGC---CCCAGGGGCCTTTTCCTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 416684 57 - 578057 TGGAGGTGTCAGGTCCTCCTGG-------CC--------------------ACAAAAGCAGTAGC---CCCA-GGGCCTTTTCCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109941830 58 - 110113093 TGGAGGTGTCAGGTCCTCCTGG-------CC--------------------ACAAAAGCAGCAGC---CCCAGGGGCCTTTTCTTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670002 58 - 92844088 TGGAGGTGTCAGGTCCTCCCGG-------CC--------------------ACAAAAGCAGCAAC---CCCAGGTACCTCTTCTTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96332522 58 + 96509753 TGGAGGTGTCAGGTCCTCCCGG-------CC--------------------ACAAAAGCAGCAAC---CCCAGGTACCTCTTCTTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804038 58 - 16982598 TGGAGGTGTCAGGTCCTCCCGG-------CC--------------------ACAAAAGCAGCAAC---CCCAGGTACCTCTTCTTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611103 58 - 3785965 TGGAAGTGTCAGGTCCTCCCGG-------CC--------------------ACAAAAGCAGCAAC---CCCAGGTACCTCTTCTTCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90234790 58 - 90373283 TGGAGGTGTCAGGTCCTCCCGG-------CC--------------------ACAGAAGCAGCAAC---CCCAGGTACCTTTTCTTCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 136663 58 + 156971 TGGAGGTGTCAGGTCCTCCCGG-------CC--------------------ACAAAAGCAGCAAC---CCCAGGTGCCTCTTCTTCCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5485589 58 - 5823884 TGGAGGTGTCAGGTCCTCCCAG-------CC--------------------ACAAAAGCAGCAAC---CCCAGGAGCCTTTTCTTCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135129 58 + 159171411 TGGAGGTGTCGGGCCCTCCTGG-------CC--------------------ACAAAAGCAGCATC---CCCACATGCCTTTCCTTCCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200850 58 + 16356641 TGGAGGTGTCGGGCCCTCCTGG-------CC--------------------ACAAAAGCAGCATC---CCCAGGTGCCTTTCCTTCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062044 58 + 1231380 TGGAGGTGTCGGGCCCTCCTGG-------CC--------------------ACAAAAGCAGCATC---CCCAGGTGCCTTTCCTTCCT i cebCap1.NW_016107870v1 I 10 C 0 s aotNan1.NW_018500483v1 2600168 58 + 11732439 TGGAGGTGTCGGGCCCTCCCGG-------CC--------------------ACAAAAGCAGCACC---CCCAGGTGCCTTTCCTTCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22768292 41 + 22939663 ------TGCAGGGTCATTCTAG-------CT--------------------CCAG-------GGC---TTTAAGTGAAGAGTCT---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181727770 64 + 182113224 TGTGGGTGCCA-GTCATCCTGGCACGGGTCC--------------------ACATGTGTGGAGAC---CCCAGATGCCCCTTTCCTCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47543021 73 + 47698779 ------TGCC--GTCCTGCTGT-------CCCCGTCACTGGCTCAGCAGGGACAGAGGCAGCTGCTGGCCTGGGCTCCGCTGCCTCCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=1540925.000000 s hg38.chr20_KI270870v1_alt 15063 148 + 183433 CCCAGAAGC----ACCTCACCGATGCCCGCTGCAACACCAGGGCCTGAGCCGGGGGTGCTCCCCCGTCTGTACCCCCAGCACTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTTC---GTGGGCTGGGCATTGTTCCAGCCAGCTGTGAGCTTGTGA s panTro5.chr20 66348122 148 + 66533130 CCCAGAAGC----ACCTCACCGATGCCCGCTGCAACACCAGGGCCTGAGCCGGGGGTGCTCCCCCGTCTGTACCCCCAGCACTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTTC---GTGGGCTGGGCATTGTTCCAGCCAGCTGTGAGCTTGTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027218 148 + 62195757 CCCAGAAGC----ACCTCACCGATGCCCGCTGCAACACCAGGGCCTGAGCCGGGGGTGCTCCCCCGTCTGTACCCCCAGCACTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTTC---ATGGGCTGGGCATTGTTCCAGCCAGCTGTGAGCTTGTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 416741 148 - 578057 CCCAGAAGC----ACCTCACCGATGCCCGCTGCAACACCAGGGCCTGAGCCGGGGGTGCTCCCCCGTCTGTACCCCCAGCACTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTTC---GTGGGCTGGGCATTGTTCCAGCCAGCTGTGAGCTTGTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109941888 152 - 110113093 CCCAGAAGCACCTACCTCACTGATGCCCGCTGCAACACCAGGGCCTGAGCCGGGGGTGCTCCCCCGTCTGTACCCCCAGCACTCA-----GGGCTCAGAAAGGCCCTTTGCTCCGTTC---GTGGTCTGGGTATTGTTCCAGCCAGCTGTGAACTTGTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670060 146 - 92844088 CCCAGAGGC----ACCTCGCCCGTGCCCACTGCAACACCA-GGCCTGAGCC-GGGGTGCTCCCCTGTCTGTACCCCCAGCCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTCT---GTGGGCTGGGCATTGTTCCAGCCAACTGTGACCTTGTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96332580 147 + 96509753 CCCAGAGGC----ACCTCGCCCGTGCCCACTGCAACACCA-GGCCTGAGCCAGGGGTGCTCCCCTGTCTGTACCCCCAGCCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTCT---GTGGGCTGGGCATTGTTCCAGCCAACTGTGACCTTGTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804096 147 - 16982598 CCCAGAGGC----ACCTCGCCCGTGCCCACTGCAACACCA-GGCCTGAGCCAGGGGTGCTCCCCTGTCTGTACCCCCAGCCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTCT---GTGGGCTGGGCATTGTTCCAGCCAACTGTGACCTTGTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611161 147 - 3785965 CCCAGAGGC----ACCTCACCTGTGCCCACTGCAACACCA-GGCCTGAGCCGGGGGTGCTCCCCTGTCCGTACCCCCAGGCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTCT---GTGGGCTGGGCATTGTTCCAGCCAACTGTGACCTTGTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90234848 147 - 90373283 CCCAGAGGC----ACCTCGCCTGTGCCCACTGCAACACCA-GGCCTGAGCTGGGGGTGCTCCCCTGTCTGTACCCCCAGCCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTCT---GTGGGCTGGGCATTGTTCCAGCCAACTGTGACCTTGTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 136721 147 + 156971 CCCAGAGGC----ACCTCGCCTGTGCCCACTGCAACACCA-GGCCTGAGCCAGGGGTGCTCCCCTGTCTGTACCCCCAGCCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTCT---GTGGGCTGGGCATTGTTCCAGCCAACTGTGACCTTGTGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5485647 148 - 5823884 CCCAGAAGC----ACCTTGCTTATGCCCACTGCAACACCAGGGCCTGAGCTGGGGGTGCTCCCCTGTCTGTACCCCCAGCCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTGTCT---GTGGGCCGGGCATTGTTCCAGCCAACTGTGACCTTGTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135187 148 + 159171411 CCCAGACCC----ACCTCACCTACATCCACTGCAACACCAGGGCCTGAGCCAGGGGTGCTCCCCGGTCGGTACCCCCAGCCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTCTCT---GTGGGCTGGGCATTGTTCCAGCCAACTGTGAGCTTGTGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16200908 148 + 16356641 CCCAGACCC----ACCTCACCTACATCCACTGCAACAGCAGGGCCGGAGCCAGGGGTGCTCCCTGGTCTGTACCCCCAGCCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTCTCT---GTGGGCTGGGCATTGTTCCAGCCAACTGTGAGATTCTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062102 147 + 1231380 CCCAGACCC----ACCTCACCTACATCCACTGCAACACCAGGGCCTGAGCCAGGGGTGCTCCCCGGTCTGTACCCCCAGCCCTCA-----GGGCTCAGAAAGGCCCTTTGCTCTCTCC---GTGGGCT-GGCATTGTTCCAGCCAACTGTGAGCTTGTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2600226 148 + 11732439 CCCAGACCC----ACCTCACCTACATCCACTGCAACACCAGGGCCTGAGCCAGGGGTGCTCCCCGGTCTGTACCCCCAGCCCTCA-----GGGCTCCGAAAGGCCCTTTGCTCTCTCC---GTGGGCTGGGCATTGTTCCAGCCAACTGTGAGCTTGTGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22768333 134 + 22939663 -CCAGGAGC----CCCT--------TCTGCTGCAACCCCATTGCCTAATCTGGGGCTGCT--GTGGTCTGTACCCTGTGCCCTTG-----AGGCTCAGAAAGG----TGGCTTTGTCCTGGGTAGGTTGGGCTTTATTCCAGCCAACTGTGAGCCTGT-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181727834 111 + 182113224 -CTAGTCAC----ACCTCACCTGTGGCCTCTGC--------AGCTTGG------------CAGCTGTCTGTAT----AGCCTTTACACTTGGGCTAAGAGAGCTGCTTTGTTCCGCTT------GGCAGGGCATTGTCCCAGAGGA-------------- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1786317 1741 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=1173636.000000 s hg38.chr20_KI270870v1_alt 15211 105 + 183433 GAGCATCGTTCTGTGGAAATGGTTTCCATTTTCAGAAATAAATTGGCCTTTTCAAATGAACCTGTGAGGCCCTTTG-GGTGAAGAGAGGAGAGGCCAGGGAGGGAG s panTro5.chr20 66348270 105 + 66533130 GAGCATCGTTCTGTGGAAATGGTTTCCATTTTCAGAAATAAATTGGCCTTTTCAAATGAACCTGTGAGGCCCTTTG-GGTGAAGAGAGGAGAGGCCAGGGCGGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027366 105 + 62195757 GAGCATCGTTCTGTGGAAATGGTTTCCATTTTCAGAAACAAATTGGCCTTTTCAAATGAACCTGTGAGGCCCTTTG-GGTGAAGAGAGGAGAGGCCAGGGCGGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 416889 105 - 578057 GAGCATCGTTCTGTGGAAATGGTTTCCATTTTCAGAAATAAATTGGCCTTTTCAAATGAACCTGTGAGGCCCTTTG-GGTGAAGAGAGGAGAGGCCAGGGAGGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942040 105 - 110113093 GAGCATCGTTCTGTGGAAGTGATTTCCATTTTCAGAAATAAATTGGCCTTTTCAAATGAACCTGTGAGGCCCTTTG-GGTGTAGAGAGGAGAGGCCAGGGAGGAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670206 91 - 92844088 GAGCATCGTTCTGTGGAAAT--------------GAAATAAATTGGCCTTTTCAAACGAACCTGTGAGGCCCTTTG-GGTGCAGAGAGGAGAGGCCAGGAACGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96332727 91 + 96509753 GAGCATCGTTCTGTGGAAAT--------------GAAATAAATTGGCCTTTTCAAACGAACCTGTGAGGCCCTTTG-GGTGCAGAGAGGAGAGGCCAGGAACGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804243 91 - 16982598 GAGCATCGTTCTGTGGAAAT--------------GAAATAAATTGGCCTTTTCAAACGAACCTGTGAGGCCCTTTG-GGTGCAGAGAGGAGAGGCCAGGAAGGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611308 91 - 3785965 GAGCATCGTTCTGTGGAAAT--------------GAAATAAATTGGCCTTTTCAAACGAACCTGTGAGGCCCTTTG-GGTGTAGAGAGGAGAGGCCAGGAAGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90234995 91 - 90373283 GAGCATCGTTCTGTGGAAAT--------------GAAATAAATTGGCCTTTTCAAACGAACCTGTGAGGCCCTTTG-GGTGTAGAGAGGAGAGGCCAGGAAGGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 136868 91 + 156971 GAGCATCGTTCTGTGGAAAT--------------GAAATAAATTGGCCTTTTCAAACGAACCTGTGAGGCCCTTTG-GGTGTAGAGAGGAGAGGCCAGGAAGGGAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5485795 105 - 5823884 GAACATCGTTCTGTGGAAATGATTTCCATTTTCAGAAATAAATTGGCCTTTTCCAACGAACCTGTGAGGCCCTTTg-gatgtagagaggagaggccagggagggag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135335 105 + 159171411 GAGCATCGTTCTGTGGAAATGATTTCCATTTTCAGAAATAAACTGGCCTTTTCAAATGAACCAGTGAGGCCTTTTG-GGTGTAGAGAGGAGAGGCCAGGGAGGGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201056 105 + 16356641 GAGCATTGTTCTGTGGAGATGATTTCCATTTTCAGAAATAAACTGGCCTTTTCAAATGAACCGGTGAGGCCCTTTG-GGTGTAGAGAGGAGAGGCCAGGGAGGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062249 105 + 1231380 GAGCATCCTTCTGTGGAAATAATTTCTATTTTCAGAAATAAACTGGCCTTTTCAAATGAACCAGTGAGGCCCTTTG-GGTGTAGAGAGGAGAGGCCAGGGAGGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2600374 103 + 11732439 GAGCATCGTTCTGTGGAAGTGATTTCCATTTTCAGAAATAAACTGGCCTTTTCAAATGAACTGGTGAGGCCCTTTG-AGTGTAGAGAGGAGAGGCCAGGGAGG--G i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1788058 106 - 2029793 GAGCATCTTTCTGTGGAAATGATTTCCGTTTTCAGAAATGAATTGGCCTTTTCAAATCACCCTGAGAGGCACTTTTGGGGGTGGAAAGGAGAGGCCAGGCAGGGAG i proCoq1.NW_012150197v1 I 1741 I 483 s otoGar3.GL873542 22768467 98 + 22939663 GAACACCATTCTGTGGAAATG---TCCATTTTCAGAAATGAATTTAATTTTTCAAATCATCCTATGAGGCATTTTT-GGGGTATAAAGGAGAGGCCGGGAAG---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181727945 89 + 182113224 AAGCTTTGCTTCAT-GAAAGGATTTTCACTTTCAGAAATGAATTGGTCTTTGCA--------------GCCTGTTG-GGTGT-GAGGGGAAAGGCCGTGGAGGGAG i mm10.chr2 C 0 C 0 e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=394942.000000 s hg38.chr20_KI270870v1_alt 15316 41 + 183433 GGAGCCGTGGTCAGCTCTGTTGGGCAGAACGGTGGTGGGGG---- s panTro5.chr20 66348375 41 + 66533130 GGAGCCGTGGTCAGCTCTGTCGGGCGGAACGGTGGTGGGGG---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027471 41 + 62195757 GGAGCCGTGGTCAGCTCTGTCAGGCGGAACGGTGGTGGGGG---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 416994 41 - 578057 GGAGCCGTGGTCAGCTCTGTTGGGCGGAACggtggtggggg---- i gorGor5.CYUI01015848v1 C 0 I 14 s nomLeu3.chr13 109942145 41 - 110113093 GGAGCCGTGCTCAGCTCTGTCGGGCGGAACGGTGGTGGGGA---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670297 41 - 92844088 GGAGCCGTGCTCAGCTCTGTCGGGCAGAACGATGGTGGGGG---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96332818 41 + 96509753 GGAGCCGTGCTCAGCTCTGTCGGGCAGAACGATGGTGGGGG---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804334 41 - 16982598 GGAGCCGTGCTCAGCTCTGTCGGGCAGAACGATGGTGGGGG---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611399 41 - 3785965 GGAGCCGTGCTCAGCTCTGTCGGGCAGAACGATGGTGGGGG---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235086 41 - 90373283 GGAGCCGTGCTCAGCTCTGTCGGGCAGAACGATGGTGGGGG---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 136959 41 + 156971 GGAGCCGTGCTCAGCTCTGTCAGGCAGAACGATGGTGGGGG---- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5485900 41 - 5823884 ggagCCGTGCTCAGCTCTGTCGGGCAGAACGATGGTGGGGG---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135440 39 + 159171411 AGAGCCGTGCACAG--CTGTCGGGTGGAATGGTAGTAGGGG---- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201161 41 + 16356641 AGAGCTGTGCTCAGCTCTGTCGGGTGGAATGGCTGTTGGGG---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062354 41 + 1231380 AGAGCCATGCTCAGCTCTGTCGGGTGGAACGGCGCCGGGGG---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2600477 41 + 11732439 AGAGCTGTGCTCAGCTCTGTCGGACGGAACGGTGGTGGGGG---- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22768565 33 + 22939663 GAGGCTGAGCTGAGCTCTGT--------ATGATTGGGGGGC---- i otoGar3.GL873542 C 0 I 5 s mm10.chr2 181728034 37 + 182113224 ---CCAGGTGTCAGCTGTACAGGGTGGG-----GGTGGGGAAATG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=50315.000000 s hg38.chr20_KI270870v1_alt 15357 8 + 183433 CCT--GACAG s panTro5.chr20 66348416 8 + 66533130 CCT--GACAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027512 8 + 62195757 CCT--GACAG i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109942186 8 - 110113093 CCT--GGTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670338 8 - 92844088 CCA--GACAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96332859 8 + 96509753 CCA--GACAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804375 8 - 16982598 CCA--GACAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611440 8 - 3785965 CCA--GACAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235127 8 - 90373283 CCA--GACAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137000 8 + 156971 CCA--GACAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5485941 10 - 5823884 CCACTGGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135479 8 + 159171411 CCT--GGCAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201202 8 + 16356641 CCT--GGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062395 8 + 1231380 CCT--GGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2600518 8 + 11732439 CCT--GGCAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22768603 6 + 22939663 TCA--GAC-- i otoGar3.GL873542 I 5 C 0 s mm10.chr2 181728071 8 + 182113224 CCT--TTCAG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e gorGor5.CYUI01015848v1 417035 14 - 578057 I a score=907658.000000 s hg38.chr20_KI270870v1_alt 15365 117 + 183433 CAAGGCCACTGACATGGCACATCCTCTG-----TCTGGGGTG----TGGGGTGAGGGAGTG-------------------ATGGGTGC-----CAGTCAGTGTGCATCTGAGCATTTTGTGGGGCTGCGTGTG------------------GGGGTCTTGCAGGGACC s panTro5.chr20 66348424 117 + 66533130 CAAGGCCACTGACATGGCACATCCTCTG-----TCTGGGGTG----TGGGGTGAGGGAGTG-------------------ATGGGTGC-----CAGTCAGTGTGCATCTGAGCATTTTGTGGGGCTGCGTGTG------------------GGGGTCTTGCAGGGACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027520 117 + 62195757 CAAGGCCACTGACATGGCACATCCTCTG-----TCTGGGGTG----TGGGGTGAGGGAGTG-------------------ATGGGTGC-----CAGTCAGTGTGCATCTGAGCATTTTGTGGGGCTGTGTGTG------------------GGGGTCTTGCAGGGACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417049 117 - 578057 gggggCCACTGACATGGCACATCCTCTG-----TCTGGGGTG----TAGGGTGAGGGAGTG-------------------ATGGGTGC-----CAGTCAGTGTGCATCTGAGCATTTTGTGGGGCTGCGTGTG------------------GGGGTCTTGCAGGGACC i gorGor5.CYUI01015848v1 I 14 C 0 s nomLeu3.chr13 109942194 117 - 110113093 CAAGGCCACCGACAGGGCACATCCTCTG-----TCTGGGGTG----TGGGGTGAGGGAGGG-------------------ATGGGTGC-----CAGTCAGTGTGCATCTGAGCATTTTGTGGGGCTCTGTGTG------------------GGGGTCTTGCAGGGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670346 102 - 92844088 ---------------GGCACATCATCTG-----TCTGGGGTG----TGGGGTGATGGAGTG-------------------ATGGGTGC-----CAGTCGGTGTGCCTCTGAGCATTCTGTGGGGCTGTGTGTG------------------GGGCTCTTGCAGGGACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96332867 98 + 96509753 ---------------GGCACATCA---------TCTGGGGTG----TGGGGTGATGGAGTG-------------------ATGGGTGC-----CAGTCGGTGTGCCTCTGAGCATTCTGTGGGGCTGTGTGTG------------------GGGGTCTTGCAGGGACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804383 102 - 16982598 ---------------GGCACATCATCTG-----TCTGGGGTG----TGGGGTGATGGAGTG-------------------ATGGGTGC-----CAGTCGGTGTGCCTCTGAGCATTCTGTGGGGCTGTGTGTG------------------GGGGTCTTGCAGGGACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611448 102 - 3785965 ---------------GACACATCATCTG-----TCTGGGGTA----TGGGGTGATGGAGTG-------------------ATGGGTGC-----CAGTCAGTGTGCATCTGAGCATTCTGTGGGGCTGTGTGTG------------------GGGGTCTTGCAGGGACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235135 102 - 90373283 ---------------GGCACATCGTCTG-----TCTGGGGTG----TGGGGTGATGGAGTG-------------------ATGGGTGC-----CAGTCAGTGTGCATCTGAGCATTCTGTGGAGCTGTGTGTG------------------GGGGTCTTGCAGGGACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137008 102 + 156971 ---------------GGCACATCATCTG-----TCTGGGGTG----TGGGGTGATGGAGTG-------------------ATGGGTGC-----CAGTCAGTGTGCATCTGAGCATTCTGTGGGGCTGTGTGTG------------------GGGGTCTTGCAGGGACC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5485951 102 - 5823884 ---------------GGCACATCATCTG-----TCCGGGGTG----TGGGGTGATGGAGTG-------------------ATGGGTGC-----CAGTCAGTGTGCATCTGAGCATCCTGTGGGGCTGTGTGTG------------------GGGGTCCTGCAGGGACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135487 117 + 159171411 CAAGGCTGAGGACAGAGCGCATCTTCTG-----TCTGGGGTG---CTGGGGTGAGGCGGGG-------------------AT-GGTGC-----CAGTCCGTGTGCATCTGAGCATTTTGTGGGCCTGTGTGTG------------------GAGGTCTTATAGGGACC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201210 117 + 16356641 CAAGGCTGTGGACGGAGCACATACTCTG-----TCTGGGGTG---CGGGGGTGAGGGGGCA-------------------AT-GGTGC-----CAGTCTGTGTGCATCTGAGCATTTTGTGGGCCTGCGTGTG------------------GGGGTCTTGCAGGGACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062403 116 + 1231380 CAAGGCTGTGGACAGAGCACATCCTCTG-----TCTGGGGTG---CTGGGGTGAGG-GGGG-------------------AT-GGGGC-----CACTCTGTGTGCATCTGAGCATTTTGTGGGCCTGTGTGTG------------------GGTGTCTTGCAGGGACC i cebCap1.NW_016107870v1 C 0 I 52 s aotNan1.NW_018500483v1 2600526 116 + 11732439 CAAGGCTGCGGACTGAGCGCAT-CTCTG-----TCTGGGGTG---CTGGGGTGAGGGGAGG-------------------AT-GGCGC-----CAGCGTGTGTGCATCTGAGCATTTTGTGGGCCTGTGTGGG------------------GGGGCCTTGCAGGGACC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22768609 67 + 22939663 CATGAGTCCTG----GGCAAGTC-----------CAGGGGTG----TTGG-----GGAGTA-------------------ATAGGACC-----TGG---GTGTGCATC-------------------AGTGTG------------------GGGG------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181728079 158 + 182113224 ---------TGACG-ACCAGACTTTCTGGAAGTGCTGGGGCAGGGTTGGGAGGATGGGGTGGTCGGGTATGTGGTGGGTTATGGGTATGGATACGGTAGGCTTGCATCTGGGTCTCATGTGTGTATATGTTTGCCTCTGGGCTCAGGAGAAGTGGTCTTCCCAGGATA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=49062.000000 s hg38.chr20_KI270870v1_alt 15482 9 + 183433 TGAAGGAG-------------------------------------------A s panTro5.chr20 66348541 9 + 66533130 TGAAGGAG-------------------------------------------A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027637 9 + 62195757 TGAAGGAG-------------------------------------------A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417166 9 - 578057 TGAAGGAG-------------------------------------------A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942311 52 - 110113093 CGAAGGAGAAGCAGACCTACATTTATGCGCGGCCGAGCTCACTGACACTGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670448 52 - 92844088 CGAAGGAGAAGCAGACCTACATTTTTGTGCGGCCGAGCACAGTGACACTGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96332965 52 + 96509753 CGAAGGAGAAGCAGACCTACATTTTTGTGCGGCCGAGCACAGTGACACTGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804485 52 - 16982598 CGAAGGAGAAGCAGACCTACATTTTTGTGCGGCCGAGCACAGTGACACTGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611550 52 - 3785965 TGAAGGAGAAGCAGACCTACATTTTTGTGCGGCCGAGCACAGTGACACTGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235237 52 - 90373283 CAAAGGAGAAGCAGACCTACATTTATGTGCGGCCGAGCACAGTGACACTGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137110 52 + 156971 CAAAGGAGAAGCAGACCTACATTTTTGTGCGGCCGAGCACAGTGACACTGTA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486053 52 - 5823884 CGAAGGAGAAGCAGACCTACATTTATGTGCGGCTGGGCACAGTGACACTGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135604 9 + 159171411 TGGAGGAGA------------------------------------------- i calJac3.chr5 C 0 I 44 s saiBol1.JH378156 16201327 9 + 16356641 CAGAGGAGA------------------------------------------- i saiBol1.JH378156 C 0 I 43 s aotNan1.NW_018500483v1 2600642 9 + 11732439 CGGAGGAGA------------------------------------------- i aotNan1.NW_018500483v1 C 0 I 46 s otoGar3.GL873542 22768676 6 + 22939663 ---AGCAGA------------------------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181728237 9 + 182113224 AGAGGAAGA------------------------------------------- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e cebCap1.NW_016107870v1 1062519 52 + 1231380 I a score=7800.000000 s hg38.chr20_KI270870v1_alt 15491 1 + 183433 C s panTro5.chr20 66348550 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027646 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417175 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942363 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670500 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333017 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804537 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611602 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235289 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137162 1 + 156971 C i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486105 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22768682 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728246 0 + 182113224 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16201336 43 + 16356641 I e cebCap1.NW_016107870v1 1062519 52 + 1231380 I e calJac3.chr5 58135613 44 + 159171411 I e aotNan1.NW_018500483v1 2600651 46 + 11732439 I a score=361610.000000 s hg38.chr20_KI270870v1_alt 15492 46 + 183433 CCCTAGGGCAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----GGACAGCC- s panTro5.chr20 66348551 46 + 66533130 CCCTAGGGCAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAGCC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027647 46 + 62195757 CCCTAGGGCAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAGCC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417176 45 - 578057 CCC-AGGGCAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAGCC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942364 46 - 110113093 CCCTAGGGCAGGGGCCAGGGAG---AAGT--------GCCAGGACCCTG-----AGACAGCC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670501 45 - 92844088 CCCTCGGGCAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAG-C- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333018 45 + 96509753 CCCTCGGGCAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAG-C- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804538 45 - 16982598 CCCTCGGGCAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAG-C- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611603 45 - 3785965 CCCTCGGGCAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAG-C- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235290 45 - 90373283 CCCTCAGGCAGGGGCCAGGGAG---AAGC--------GCCAGGTCCCTG-----AGACAG-C- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137163 45 + 156971 CCCTCGGGCAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAG-C- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486106 45 - 5823884 CCCTCGGGCAGGGGCCAGGGAG---AAGC--------ACCAGGACTCTG-----AGACAG-C- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135657 46 + 159171411 CCCCATGGTAGGGGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAGCC- i calJac3.chr5 I 44 C 0 s saiBol1.JH378156 16201379 46 + 16356641 CCCCAGGGCAGGAGCCAGGGAG---AAGC--------GCCAGGACCCTG-----AGACAGCC- i saiBol1.JH378156 I 43 C 0 s cebCap1.NW_016107870v1 1062571 46 + 1231380 CCCCAGGGCGGGGGCCAGGGAG---AAGA--------GCCAGGACCCTG-----AGACAGCC- i cebCap1.NW_016107870v1 I 52 I 157 s otoGar3.GL873542 22768683 53 + 22939663 -CCACATGTATGCATTGGCGAGGCCATGC--------CCAGTGACTTTGTCCCCAGGTGTGC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181728246 49 + 182113224 ----AGAGGGTGTGCCACATGG---CTGTTTGTGTAAGCTAGGAACAT------AGATAG-CA i mm10.chr2 C 0 I 1 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e aotNan1.NW_018500483v1 2600651 46 + 11732439 I a score=263899.000000 s hg38.chr20_KI270870v1_alt 15538 40 + 183433 TGAGCAACACACAA-CATAGCTGTGCTGGCTTCACGCTTGT s panTro5.chr20 66348597 40 + 66533130 TGAGCAACACACAA-CATAGCTGTGCTGGCTTCACTCTTAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027693 40 + 62195757 TGAGCAACACACAA-CATAGCTGTGCTGGCTTCACTCTTAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417221 40 - 578057 TGAGCAACACACAA-CACAGCTGTGCTGGCTTCACTCTTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942410 40 - 110113093 TAAGCAACATACAG-CATAGCTATGCTGGCTTTATTCTTAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670546 41 - 92844088 TAAGCAACATATAAGCACAGCTGTGCTGGCTTTATTCTTAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333063 41 + 96509753 TAAGCAACATATAAGCACAGCTGTGCTGGCTTTATTCTTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804583 41 - 16982598 TAAGCAACATATAAGCACAGCTGTGCTGGCTTTATTCTTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611648 41 - 3785965 TAAGCAACATATAAGCACAGCTGTGCTGGCTTTATTCTTAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235335 41 - 90373283 TAAGCAACATATAAGCACAGCTGTGCTGGCTTTATTCTTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137208 41 + 156971 TGAGCAACATATAAGCACAGCTGTGCTGGCTTTATTCTTAT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486151 41 - 5823884 TAAGCAACATATAAGCATGGCTGTGCTGGCTTTATTCTTAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135703 41 + 159171411 TACGCAGCATTCAAGCAGAGCTGTGCCGGCTTTACTGTTAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201425 41 + 16356641 CACGCAGCATCCAGGCAGAGCTGTGCCGGCATTACTGTCAC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22768736 28 + 22939663 TGAGCA---------CATAGTTG----AGTGTTATTCTCAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181728296 40 + 182113224 TTAGCAACAGGAAAGCTCAATTTTAG-GGCTTTGTCCTTAT i mm10.chr2 I 1 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e cebCap1.NW_016107870v1 1062617 157 + 1231380 I e aotNan1.NW_018500483v1 2600651 46 + 11732439 I a score=415939.000000 s hg38.chr20_KI270870v1_alt 15578 41 + 183433 TGCCGCTTCACATAGGTGTGGCAGCTGCCCTCCACCTGTCC s panTro5.chr20 66348637 41 + 66533130 TGCCACTTCACATAGGTGTGGCAGCTGCCCTCCACCTGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027733 41 + 62195757 TGCCACTTCACATAGGTGTGGCAGCTGCCCTCCACCTGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417261 41 - 578057 TGCCACTTCACATAGGTGTGGCAGCTGCCCTCCACCTGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942450 41 - 110113093 TGCCACTTCATATAGGTGTGGCAGCTGCCCTCCACCTGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670587 41 - 92844088 TGCCACTTCATATAGGTGTGGCAGCTGCCCTCCGTCTGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333104 41 + 96509753 TGCCACTTCATATAGGTGTGGCAGCTGCCCTCCGTCTGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804624 41 - 16982598 TGCCACTTCATATAGGTGTGGCAGCTGCCCTCCGTCTGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611689 41 - 3785965 TGCCACTTCATATAGGTGTGGCAGCTGCCCTCCGTCTGTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235376 41 - 90373283 TGCCACTTCAAATAGGTGTGGCAGCTGCCCTCCGTCTGTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137249 41 + 156971 TGCCACTTCATATAGGTGTGGCAGCTGCCCTCCGTCTGTCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486192 41 - 5823884 TGCCACTTCATATAGGTGTGGCAGCTGCCCTCCGTCTGTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135744 41 + 159171411 TGCCACTTCATACAGGTGCGGCAGCTGCCCTCTGCCTATCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201466 41 + 16356641 TGCCACTTCATGCATGTGTGGCAGCTACCCTCTGCCTGCCC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2600697 40 + 11732439 TGCCGCTTCACAC-GGTGTGGCAGCTGCCCTCCGCCTGTCC i aotNan1.NW_018500483v1 I 46 I 89 s otoGar3.GL873542 22768764 41 + 22939663 TGACACTTCATGGAAGTGTGGCAGACATCCTCCACTTCTGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181728336 38 + 182113224 TGTCATTTCATGTAGATGTGGCAGTCAACCTCCATCTA--- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e cebCap1.NW_016107870v1 1062617 157 + 1231380 I a score=26605.000000 s hg38.chr20_KI270870v1_alt 15619 13 + 183433 CCCTGTGTGCAGG s panTro5.chr20 66348678 13 + 66533130 CCCTGTGTGCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027774 13 + 62195757 CCCTGTGTGCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417302 13 - 578057 CCGTGTGTGCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942491 13 - 110113093 CTGTGTGTGCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670628 10 - 92844088 CCCAGTGAGC--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333145 10 + 96509753 CCCAGTGAGC--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804665 10 - 16982598 CCCAGTGAGC--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611730 10 - 3785965 CCCAGTGAGC--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235417 10 - 90373283 CTCAGTGAGC--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137290 10 + 156971 CCCAGTGAGC--- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486233 10 - 5823884 CTCAGTGAGC--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135785 10 + 159171411 CTTATTGTGC--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201507 10 + 16356641 CTCACTGCGC--- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22768805 10 + 22939663 TTCAGCACTC--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181728374 11 + 182113224 --CTGTGACCAGG i mm10.chr2 C 0 I 1351 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e cebCap1.NW_016107870v1 1062617 157 + 1231380 I e aotNan1.NW_018500483v1 2600737 89 + 11732439 I a score=515399.000000 s hg38.chr20_KI270870v1_alt 15632 112 + 183433 GACACCTGTCCCTCAGTCCGTGCTGCGACTTGGATCTTCACACGGGCATGCATATGTGTA---GCAGGCATACAGACCCAGAGATTCATACAGACT--CCAGTGTGCTTGTTGACCA s panTro5.chr20 66348691 112 + 66533130 GACACCTGTCCCTCAGTCCGTGCTGTGACTTGGATCTTCACACGGGCATGCATATGTGTA---GCAGGCATACAGACCCAGAGATTCATACAGACT--CCAGTGTGCTTGTTGACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027787 112 + 62195757 GACACCTGTCCCTCAGTCCGTGCTGTGACTTGGATCTTCACACGGGCATGCATATGTGTA---GCAGGCATACAGACCCAGAGATTCATACAGACT--CCAGTGTGCTTGTTGACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417315 112 - 578057 GACACCTGTCCCTCAGTCCGTGCTGCGACTTGGATCTTCACACGGGCATGCATATGTGTA---GCAGGCATACAGACCCAGAGATTCATACAGACT--CCAGTGTGCTTGTGGGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942504 112 - 110113093 GACACCTGTCCCTCAGTCCGCGCTGCGACTCGGATCTTCACACGGGCATGCATATGTGTA---GCAGACATACACACCCAGAGATTCATGCAGACT--CCGGTGTGCACGCTGACCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670638 90 - 92844088 ---------------------GCTACAACTCGCATCTTCA-ATGTGCATGCATATATGTA---GCAGACATACAGACCCAGAGGTTCATACGGACT--CGAGTGTGCATGTTGACCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333155 90 + 96509753 ---------------------GCTACAACTCGCATCTTCA-ATGTGCATGCATATATGTA---GCAGACATACAGACCCAGAGGTTCATACGGACT--CGAGTGTGCATGTTGACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804675 90 - 16982598 ---------------------GCTACAACTCGCATCTTCA-ATGTGCATGCATATATGTA---GCAGACATACAGACCCAGAGGTTCATACGGACT--CGAGTGTGCATGTTGACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611740 90 - 3785965 ---------------------GCTACAACTCACATCTTCA-ATGTGCATGCATATATGTA---GCAGACATACAGACCCAGAGGTTCATACGGACT--CGAGTATGCATGTTGACCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235427 90 - 90373283 ---------------------GCTACAACTCGGATCTTCA-ATGTGCATGCATATATGTA---GCAGACATGCAGACCCAGAGGCTCATACGGACT--CGAGTGTGCATGTTGACCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137300 90 + 156971 ---------------------GCTACAACTCACATCTTCA-ATGTGCATGCATATATGTA---GCAGACATACAGACCCAGAGGTTCATACGGACT--TGAGTATGCATGTTGACCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486243 90 - 5823884 ---------------------GCTACAACTCGGATCTTCA-ATGTGCATGCATATATGTA---GCAGACATACAGACCCAGAGGTTCATACGGACT--TGTGTGCGCATGTTGACCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135795 80 + 159171411 ---------------------ACTATGACTTGG-TCTCCACACACGCATGCAGACATGTT---GCAGAT------------GGAGTCACACAGAATCACAAGCGTGCATGTTGGCTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201517 80 + 16356641 ---------------------GCCGTGACTCAG-TCTCCACACACACATGCAGATATGTA---GCAGAT------------GGAGTCACACAGACTCACGAGCGTGCATGTTGGCTG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22768815 88 + 22939663 ----------------------CTGCGACTCAGGAGTTCATAC-TGCATGCACCAAAGTATGCACATGCACACAG---CAGACACACGTGGAAACA--CTTGTGTGCATGT-GACCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e cebCap1.NW_016107870v1 1062617 157 + 1231380 I e aotNan1.NW_018500483v1 2600737 89 + 11732439 I a score=14655.000000 s hg38.chr20_KI270870v1_alt 15744 2 + 183433 TC- s panTro5.chr20 66348803 2 + 66533130 TC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027899 2 + 62195757 TC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417427 2 - 578057 TC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942616 2 - 110113093 TC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670728 2 - 92844088 TC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333245 2 + 96509753 TC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804765 2 - 16982598 TC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611830 2 - 3785965 TC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235517 2 - 90373283 TC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137390 2 + 156971 TC- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486333 2 - 5823884 TC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135875 2 + 159171411 TC- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201597 2 + 16356641 TC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062774 2 + 1231380 TC- i cebCap1.NW_016107870v1 I 157 C 0 s otoGar3.GL873542 22768903 2 + 22939663 -CT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e aotNan1.NW_018500483v1 2600737 89 + 11732439 I a score=262717.000000 s hg38.chr20_KI270870v1_alt 15746 25 + 183433 TCATCTCCAGCCAGGCAGGCCCTGG s panTro5.chr20 66348805 25 + 66533130 TCATCTCCAGCCAGGCAGGCCCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027901 25 + 62195757 TCATCTCCAGCCAGGCAGGCCCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417429 25 - 578057 TCATCTCCAGCCAGGCAGGCCCTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942618 25 - 110113093 TCATCTCCAGCCAGGCAGGCCCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670730 25 - 92844088 TCCTCTCTAGCCAGGCAGGCCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333247 25 + 96509753 TCCTCTCTAGCCAGGCAGGCCCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804767 25 - 16982598 TCCTCTCTAGCCAGGCAGGCCCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611832 25 - 3785965 TCCTCTCTAGCCAGGCAGGCCCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235519 25 - 90373283 TCCTCTCTAGCCAGGCAGGCCCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137392 25 + 156971 TCCTCTCTAGCCAGGCAGGCCCTGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486335 25 - 5823884 TCCTCTCTAGCCAGGCAGGCCCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135877 25 + 159171411 TCATCTCTGGCCAGGCAGGCCCTGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201599 23 + 16356641 TCATCTCCGGCCAGGCAGGCCCT-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062776 25 + 1231380 TCATCTCCGGCCAGGCAGGCCCTGG i cebCap1.NW_016107870v1 C 0 I 14 s aotNan1.NW_018500483v1 2600826 25 + 11732439 TCATCTCCGGCCGGCCAGGCCCTGG i aotNan1.NW_018500483v1 I 89 C 0 s otoGar3.GL873542 22768905 25 + 22939663 TCAGCTCCAGCCATGTGAGCTCTGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=129152.000000 s hg38.chr20_KI270870v1_alt 15771 13 + 183433 TAGG-AGGGGTGGA- s panTro5.chr20 66348830 13 + 66533130 TAGG-AGGGGTGGA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027926 13 + 62195757 TAGG-AGGGGTGGA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417454 13 - 578057 TAGG-AGGGGTGGA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942643 13 - 110113093 TAGG-AGGGGTGGA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670755 13 - 92844088 TAGG-AGGGGTGGA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333272 13 + 96509753 TAGG-AGGGGTGGA- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804792 13 - 16982598 TAGG-AGGGGTGGA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611857 13 - 3785965 TAGG-AGGGGTGGA- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235544 13 - 90373283 TAGG-AGGGGTGGA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137417 13 + 156971 TAGG-AGGGGTGGA- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486360 13 - 5823884 TAGG-AGGGGTGGA- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135902 13 + 159171411 TAGG-AGGGGTGGA- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201622 11 + 16356641 --GG-AGGGGTGGA- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2600851 13 + 11732439 TGGG-AGGGGTGGA- i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22768930 15 + 22939663 TAGGTAGGGGTGGTA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e cebCap1.NW_016107870v1 1062801 14 + 1231380 I a score=88778.000000 s hg38.chr20_KI270870v1_alt 15784 16 + 183433 TTCTGCCCTG-TGGCCA s panTro5.chr20 66348843 16 + 66533130 TTCTGCCCTG-TGGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027939 16 + 62195757 TTCTGCCCTG-TGGCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417467 16 - 578057 TTCTGCCCTG-TGGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942656 16 - 110113093 TTCTGCCCTG-TGGCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670768 17 - 92844088 TTCTGCCCTGCTGGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333285 17 + 96509753 TTCTGCCCTGCTGGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804805 17 - 16982598 TTCTGCCCTGCTGGCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611870 17 - 3785965 TTCTGCCCTGCTGGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235557 17 - 90373283 TTCTGCCCTGCTGGCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137430 17 + 156971 TTCTGCCCTGCTGGCCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486373 17 - 5823884 TTCTGCCCTGCTGGCCA i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22768945 12 + 22939663 -----CCCTGACCCTCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1788164 483 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16201633 0 + 16356641 C e cebCap1.NW_016107870v1 1062801 14 + 1231380 I e calJac3.chr5 58135915 0 + 159171411 C e aotNan1.NW_018500483v1 2600864 1 + 11732439 I a score=85634.000000 s hg38.chr20_KI270870v1_alt 15800 13 + 183433 GAGTCCAGGCCTG s panTro5.chr20 66348859 13 + 66533130 GAGTCCAGGCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027955 13 + 62195757 GAGTCCGGGCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417483 13 - 578057 GAGTCCAGGCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942672 13 - 110113093 GAGTCCAGGCGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670785 13 - 92844088 GAGTCCAGGCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333302 13 + 96509753 GAGTCCAGGCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804822 13 - 16982598 GAGTCCAGGCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611887 13 - 3785965 GAGTCCAGGCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235574 13 - 90373283 GAGTCCAGGCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137447 13 + 156971 GAGTCCAGGCCTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486390 13 - 5823884 GAGTCCAGGCCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135915 1 + 159171411 ---------C--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201633 1 + 16356641 ---------C--- i saiBol1.JH378156 C 0 C 0 s proCoq1.NW_012150197v1 1788647 13 - 2029793 GAGTCCAGGCCTG i proCoq1.NW_012150197v1 I 483 C 0 s otoGar3.GL873542 22768957 13 + 22939663 GAGCTCAGGACTG i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e cebCap1.NW_016107870v1 1062801 14 + 1231380 I e aotNan1.NW_018500483v1 2600864 1 + 11732439 I a score=53310.000000 s hg38.chr20_KI270870v1_alt 15813 5 + 183433 TCTGC s panTro5.chr20 66348872 5 + 66533130 TCTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027968 5 + 62195757 TCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417496 5 - 578057 TCTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942685 5 - 110113093 TCTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670798 5 - 92844088 TCTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333315 5 + 96509753 TCTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804835 5 - 16982598 TCTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611900 5 - 3785965 TCTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235587 5 - 90373283 TCTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137460 5 + 156971 TCTGC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486403 5 - 5823884 TCTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135916 5 + 159171411 TCTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201634 5 + 16356641 TCTGT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2600865 5 + 11732439 TCTGT i aotNan1.NW_018500483v1 I 1 C 0 s proCoq1.NW_012150197v1 1788660 5 - 2029793 TCTGC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22768970 5 + 22939663 TCCTT i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e cebCap1.NW_016107870v1 1062801 14 + 1231380 I a score=89046.000000 s hg38.chr20_KI270870v1_alt 15818 6 + 183433 CCTGCT s panTro5.chr20 66348877 6 + 66533130 CCTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027973 6 + 62195757 CCTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417501 6 - 578057 CCTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942690 6 - 110113093 CCTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670803 6 - 92844088 CCTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333320 6 + 96509753 CCTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804840 6 - 16982598 CCTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611905 6 - 3785965 CCTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235592 6 - 90373283 CCTGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137465 6 + 156971 CCTGCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486408 6 - 5823884 CCTGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135921 6 + 159171411 CCTGCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201639 6 + 16356641 CCTGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062815 6 + 1231380 CCTGCT i cebCap1.NW_016107870v1 I 14 C 0 s aotNan1.NW_018500483v1 2600870 6 + 11732439 CCTGCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1788665 6 - 2029793 CCTGCT i proCoq1.NW_012150197v1 C 0 I 408 s otoGar3.GL873542 22768975 6 + 22939663 CCTGCT i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=1063118.000000 s hg38.chr20_KI270870v1_alt 15824 100 + 183433 CTCTCTCCTC-CATCAGCTCTCCAAGATGAGCCTC-AACTGTAGCT-GTGGCCCTGCAGGTTAAGTCCTCCCAAGAGGCCTAGGCCATTAAGACCAGTGAGAG s panTro5.chr20 66348883 100 + 66533130 CTCTCTCCTC-CATCAGCTCTCCAAGATAAGCCTC-AACTGTAGCT-GTGGCCCTGCAGGTTAAGTCCTCCCAAGAGGCCTAGGCCATTAAGACCAGTGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62027979 100 + 62195757 CTCTCTCCTC-CATCAGCTCTCCAAGATAAGCCTC-AACTGTAGCT-GTGGCCCTGCAGGTTAAGTCCTCCCAAGAGGCCTAGGCCATTAAGACCAGTGAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417507 100 - 578057 GTCTCTCCTC-CATCAGCTCTCCAAGATGAGCCTC-AACTGTAGCT-GTGGCCCTGCAGGTTAAGTCCTCCCAAGAGGCCTAGGCCATTAAGACCAGTGAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942696 100 - 110113093 CTCTCTCCTC-CGTCAGCTCTCCAAGATGAGCCTC-AGCTGTAGCT-GTGTCCCTGCAGGTTAAGTGCTCCCAAGAGGCCTAGGCCATTAAGACCAGTGAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670809 100 - 92844088 CTCTCTCCTC-CATCAGCTCTCCGAGATGAGCCTC-AGCTGTGGCT-GTGGCCCTGCAGCGTAAGTGCTCCCAAGAGGCCTAGGCCATTAGGACTAGTGAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333326 100 + 96509753 CTCTCTCCTC-CATCAGCTCTCCAAGATAAGCCTC-AGCTGTGGCT-GTGGCCCTGCAGCGTAAGTGCTCCCAAGAGGCCTAGGCCATTAGGACTAGTGAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804846 100 - 16982598 CTCTCTCCTC-CATCAGCTCTCCAAGATGAGCCTC-AGCTGTGGCT-GTGGCCCTGCAGCGTAAGTGCTCCCAAGAGGCCTAGGCCATTAGGACTAGTGAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3611911 100 - 3785965 CTCTCTCCTC-CATCAGCTCTCCAAGATGAGCCTC-AGCTGTGGCT-GTGGCCCTGCAGCGTAAGTGCTCCCAAGAGGCCTAGGCCATTAGGACTAGTGAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235598 100 - 90373283 CTCTCTCCTC-CATCAGCTCTCCAAGATGAGCCTC-AGCTGTGGCT-GTGGCCCTGCAGAGTAAGTGCTCCCAAGAGGCCTAGGCCATTAGGACTAGTGAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137471 100 + 156971 CTCTCTCCTC-CATCAGCTCTCCAAGATGAGCCTC-AGCTGTGGCT-GTGGCCCTGCAGCGTCAGTGCTCCCAAGAGGCCTAGGCCATTAGGACTAGTGAGAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486414 100 - 5823884 CTCTCTCCTC-CATCAGCTCTCCAAGATGAGCCTC-AGCTGTGGCT-GTGGCCATGCAGGGTAAGTGCTCCCAAGAGGCCTAGGCCATTAGGACTAGTGAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58135927 101 + 159171411 CCCTCTCCCTGCATCAGCTCTCCAAGATGAGCCTC-AGCAGTGGCT-GTGCCCCTGCAGGGTAAGTGCTCCCAAGAGGCCTAGGCCATCAAGACCAGTGAGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201645 100 + 16356641 CCCTCTACCC-CATCAGCTCTCCAAGATGAGCCTC-AGCAGTGACT-GTACCCCTGCAGGGTAAGTGTTCCCAAGAGGCCTACGCCATCAAGACCAGTGAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062821 100 + 1231380 CCCTCTCCCC-CATCAGCTCTCCAAGATGAACCTC-AGCAGTGGCT-GTGCCCCTGCAGGGTAAGTGCTCCCAAGAGGCCTATGCCATCAAGACCAGCGAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2600876 100 + 11732439 CCGTCTCCCC-CATCAGCTCGCCAGGATGAGCCTC-AGCTGTGGCT-GTGCCCCTGCAGGGTAAGTGCTCCCAAGAGGCCTAGGCCATCAAGACCAGCGAGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22768981 102 + 22939663 CCCAGACTCC-CATCAGCTCCTATAGACAGGCCTCTAGCTGTAGCTCTTGGTCCTGAAGGGTGAGTGCTCCCAAGAGTGCCTGGCCATTAAGACTAGCAAGAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=5500.000000 s hg38.chr20_KI270870v1_alt 15924 1 + 183433 g s panTro5.chr20 66348983 1 + 66533130 g i panTro5.chr20 C 0 C 0 s panPan2.chr20 62028079 1 + 62195757 g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417607 1 - 578057 g i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942796 1 - 110113093 g i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012114444v1 5486514 1 - 5823884 g i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58136028 1 + 159171411 g i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201745 1 + 16356641 g i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062921 1 + 1231380 g i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2600976 1 + 11732439 g i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22769083 1 + 22939663 G i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e cerAty1.NW_012001373v1 3612011 0 - 3785965 C e chlSab2.chr2 90235698 0 - 90373283 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e manLeu1.NW_012101369v1 137571 0 + 156971 C e macNem1.NW_012014244v1 16804946 0 - 16982598 C e rheMac8.chr10 92670909 0 - 92844088 C e macFas5.chr10 96333426 0 + 96509753 C a score=180782.000000 s hg38.chr20_KI270870v1_alt 15925 50 + 183433 gccgggggcggtggctcatacctgtagtcccagcactttgggagaccaag s panTro5.chr20 66348984 50 + 66533130 gctgggtgcggtagctcatacctgtagtcccagcactttgggagaccaag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62028080 50 + 62195757 gctgggcgcggtggctcatacctgtagtcccagcactttgggagaccaag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417608 50 - 578057 gccgggcgaggtggctcatacctgtagtcccagcactttgggagaccaag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942797 50 - 110113093 gccgggcgcggtagctcatacctgtagtcccagcactctgggagaccagg i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012114444v1 5486515 50 - 5823884 gccaggtgtggtggatcacacctgtaatcccagcactttgggaggccaag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58136029 50 + 159171411 gccaggtgcggtggctcacacttgtagtcccagcactttgggggaccaag i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201746 50 + 16356641 gccgggcacagtggctcacacttgtagtaccagcagtttgggagaccaag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062922 50 + 1231380 gctgggcgcggtggctcacacttgtagtcccagcactttgggagaccaag i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2600977 50 + 11732439 gctgggcgcggtggctcacacttgtagtcccggcactttgggagaccgag i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e cerAty1.NW_012001373v1 3612011 0 - 3785965 C e chlSab2.chr2 90235698 0 - 90373283 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e manLeu1.NW_012101369v1 137571 0 + 156971 C e macNem1.NW_012014244v1 16804946 0 - 16982598 C e rheMac8.chr10 92670909 0 - 92844088 C e otoGar3.GL873542 22769084 0 + 22939663 C e macFas5.chr10 96333426 0 + 96509753 C a score=248236.000000 s hg38.chr20_KI270870v1_alt 15975 83 + 183433 gtgggcagattgcttgagcccaggagttcgagaccagtcaaggcaacatggtgaaacctcatctctacaaaaaaaatacaaaa s panTro5.chr20 66349034 82 + 66533130 gtgggcagattgcttgagcccaggagttcgagaccagtctaggcaacatggtgaaaccccatctctacaaaaaaa-tacaaaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62028130 82 + 62195757 gtgggcagattgcttgagcccaggagttcgagaccagtctaggcaacatggtgaaaccccatctctaacaaaaaa-tacaaaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417658 82 - 578057 gtgggcagattgcttgagcccaggagttcgagaccagtctaggcaacatggtgaaaccccatctctacaaaaaaa-tacaaaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942847 82 - 110113093 gtgggcagattgcttgagtccaggagttcgagaccagtctaggcaacatggtgaaaccccatctctacaaaaaaa-tacaaaa i nomLeu3.chr13 C 0 C 0 s calJac3.chr5 58136079 82 + 159171411 gttggcagattgattgagcccaggagttcgagaccagtctaggcaacatggtgaaactgcatctctacaaaaaaa-tacaaaa i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201796 80 + 16356641 gtgggcagatggcttgagcccaggagttcgagaccagtctaggcaacatggtgaaactgcatctctcc--aaaaa-tacaaaa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1062972 82 + 1231380 gtaggcagattgcttgagcccaggagtttgagaccagtctaggcaacatggtgaaactgcatctctacaaaaaaa-tacaaaa i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2601027 82 + 11732439 gtggacagattgcttgagcccaggagttcgagaccagtccaggcaacatggtgaaactgcatctctacaaaaaaa-tacaaaa i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e cerAty1.NW_012001373v1 3612011 0 - 3785965 C e colAng1.NW_012114444v1 5486565 0 - 5823884 C e chlSab2.chr2 90235698 0 - 90373283 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e manLeu1.NW_012101369v1 137571 0 + 156971 C e macNem1.NW_012014244v1 16804946 0 - 16982598 C e rheMac8.chr10 92670909 0 - 92844088 C e otoGar3.GL873542 22769084 0 + 22939663 C e macFas5.chr10 96333426 0 + 96509753 C a score=428633.000000 s hg38.chr20_KI270870v1_alt 16058 51 + 183433 ggccgggtgcggtggctcacgcctgtaatcccaggactttgggaggccgac s panTro5.chr20 66349116 51 + 66533130 ggccgggtgcggtggctcacgcctgtaatcccaggactttgggaggccgac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62028212 51 + 62195757 ggccgggtgcggtggctcacgcctgtaatcccaggactttgggaggccgac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417740 51 - 578057 ggccgggtgcggtggctcacacctgtaatcccaggactttgggaggccgag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942929 51 - 110113093 ggccgggggtggtggctcacgcctgtaatcccaggactttgggaggccgag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670909 51 - 92844088 ggccaggtgtggtggctcacacctgtaatcccagcactttgggaggccgag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333426 51 + 96509753 ggccaggtgtggtggctcacacctgtaatcccagcactttgggaggccgag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804946 51 - 16982598 ggccaggtgtggtggctcacacctgtaatcccagcactttgggaggccgag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3612011 51 - 3785965 ggccaggtgtggtggctcacacctgtaatcccagcactttgggaggccgag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235698 51 - 90373283 ggccaggtgtggtggctcacacctgtaatcccagcactttgggaggccgag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137571 51 + 156971 ggccaggtgtggtggctcacacctgtaattccagcactttgggaggctgag i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58136161 51 + 159171411 ggccgggtgtggtggctcacgcctataatcacagcactctgggaagctgag i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201876 51 + 16356641 ggctgggtgcgctgactcacgcctgtaatcacagcactttgggaagctgag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1063054 51 + 1231380 ggccgggtgcgctgactcacgcctgtaatcacagcactttgggaagctgag i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2601109 50 + 11732439 ggccgggtgtggtg-ctcacgcctgtaatcacagcactttgggaagttgag i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e colAng1.NW_012114444v1 5486565 0 - 5823884 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e otoGar3.GL873542 22769084 0 + 22939663 C a score=2114787.000000 s hg38.chr20_KI270870v1_alt 16109 270 + 183433 gtgggcagatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccgtctgtactaaaaatacaaaaatta-----gccgggcgtcatggtgggtgc-------ctgtaatcccagctactcgggaggctgaggcaggaaaatttcttggacctgggaggcggaggttgcattgagccgagatcatgccactgcactgcagcctgggggacagagcgagactctgtc----tcaaaa----aaa--------------acagaaaaacaaacattagctgggtatggtgg s panTro5.chr20 66349167 270 + 66533130 gtgggcggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaatta-----gccgggcgtcgtggtgggtgc-------ctgtaatcccagctactcgggaggctgaggcaggaaaatttcttggacctgggaggcggaggttgcattgagccgagatcgtgccactgcactgcagcctgggggacagagcgagactctgtc----tcaaaa----aaa--------------ccagaaaaacaaacattagctgggtatggtgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62028263 270 + 62195757 gtgggcggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaatta-----gccgggcgtcgtggtgggtgc-------ctgtaatcccagctactcgggaggctgaggcaggaaaatttcttggacctgggaggcggaggttgcattgagccgagatcgtgccactgcactgcagcctgggggacagagcgagactctgtc----tcaaaa----aaa--------------ccagaaaaacaaacattagctgggtatggtgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 417791 269 - 578057 gtgggcggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaatta-----gccgggcgtcgtggtgggtgc-------ctgtaatcccagctacttgggaggctgaggcaggaaaatttcttggacccgggaggtggaggttgcattgagccgagattgtg-cactgcactgcagcctgggggacagagcgagactctgtc----tcaaaa----aaa--------------ccagaaaaacaaacattagctgggtatggtgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109942980 269 - 110113093 atgggcggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaactgcatctctactaaaaatacaaaaatta-----gccgggtgtcgtggtgggtgc-------ctgtgatcccagctactcgggaggctgaggcaggagaatttcttggacccgggaggcggaggttgcattgagccgagatcacgccactgcactgcagcctgggggacggagtgaga--ctgtc----ccaaaa----aaa-------------cccagaaaaacagacattagctgcgtatggtgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92670960 268 - 92844088 gtggacggatcacctgaggtcaggagtttaagaccagccttgccaacatggcgaaaccctgtctctactaaaaatacaaaaatta-----gccgggtgtcatggtgggtgcctgtaatctgtaatcccagctactccggaggctgaggcaggaggatcacttggactcgggaagcggaggttgcattgagccgagatcatgccacggcactgcagcctgggg----------gactctgtc----tcaaaa----aaa-------------cccagaaaaacaaaCattagctggctatggtgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333477 268 + 96509753 gtggacggatcacctgaggtcaggagtttaagaccagccttgccaacatggcgaaaccctgtctctactaaaaatacaaaaatta-----gccgggtgtcatggtgggtgcctgtaatctgtaatcccagctactccggaggctgaggcaggaggatcacttggactcgggaagcggaggttgcattgagccgagatcatgccacggcactgcagcctgggg----------gactctgtc----tcaaaa----aaa-------------cccagaaaaacaaaCattagctggctatggtgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16804997 268 - 16982598 gtggacggatcacctgaggtcaggagtttaagaccagccttgccaacatggcgaaaccctgtctctactaaaaatacaaaaatta-----gccaggtgtcatggtgggtgcctgtaatctgtaatcccagctactccggaggctgaggcaggaggatcacttggactcgggaagcggaggttgcattgagccgagatcatgccacggcactgcagcctgggg----------gactctgtc----tcaaaa----aaa-------------cccagaaaaacaaaCattagctgggtatggtgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3612062 278 - 3785965 gtggacggatcacctgaggtcaggagtttaagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaaaaatta-----gccgggtgtcatggtgggtgcctgtaatctgtaatcccagctactccggaggctgaggcaggagaatcacttggactcgggaagcggaggtcgcattgagccgagatcatgccacggcactgcagcctgggggacagagtgagactctgtc----tcaaaa----aac-------------cccagaaaaacaaaCattagctgggtatggtgg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90235749 278 - 90373283 atggacggatcacctgaggtcaggagtttaagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaaaaatta-----gccgggcgtcatggtgggtgcctgtaatctgtaatcccagctactccggaggctgaggcaggagaatcacttggactcaggaagcggaggttgcattgagccgagatcatgccacggcactgcagcctgggggacagagtgagactctgtc----tcagaa----aaa-------------cccagaaaaacaaaCattagctgggtatggtgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137622 278 + 156971 gcgggtggatcacctgaggtcaggagtttaagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaaaaatta-----gccgggtgtcatggtgggtgcctgtaatctgtaatcccagctactccggaggctgaggcaggagaatcacttggactcgggaagtggaggttgcagtgagccgagatcatgccacggcactgcagcctgggggacagagtgagagtctgtc----tcaaaa----aaa-------------cccagaagaacaaaCattagctgggtatggtgg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486565 282 - 5823884 gtggacggatcacctgaggtcaggagtttaagaccagcctggccaacatggcgaaaccccatctctactaaaaacacaaaaattattgtggccaggca-catgatgggtgcctgtaatctgtaatcccagctactccggaggctgaggcaggagaatcacttggactcgggaagcagaggttgcattgagccgagatcatgccacggcactgcagcctgggggacagagtgagactctgtc----tcaaaa----aaa-------------cccagaaaaacaaaCattagctgggtatggtgg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58136212 256 + 159171411 gtgggcagatctcctgaggtcaggagttcaagaccagccttgccaacatggtgaaatcccgtctctactaaaaatacaaaagtta-----gctgggcgtggtggcaggcgc-------ctgtaatcccagctactcaggaggctgaggca--------------------------gaggttgcagtgagccgagatcacaccactacactccagcctgggtgccagagcaaga--ctgtc----tcaaaa----aaaaccccccaacacccacaaaaaaacaaagattagctgggtatggtgg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16201927 194 + 16356641 gtgggcggagcacctgaggtcaggaagtcaagacCAGCCTTGCA----------------------------------------g-----gtcgggcgcggtggctcaagc-------ctgtaatcccagcactttgggaggccgaggca--------------------------ggtg--------------gatcacga----------------ggtcgaaagatcgaga--ccatcctggtcaacatggtgaaaccccgtctctactaaaaatacaaaaaaactagctgggcgtggtgg i saiBol1.JH378156 C 0 M 911 s cebCap1.NW_016107870v1 1063105 255 + 1231380 gtgggcggagcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaatcccgtctctactaaaaatacaaaaatta-----gctgggcatggtggtgggcgc-------ctgtaatcccagctactcaggaggctgaggcc--------------------------gaggttgcggtgagccaaggtcacgccactgcactccagcctgggtgacagagcaaga--ctgtc----taaaaa----aaaaccccccaa-acccacaaaaaaccaaagattggctgggtatggtgg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2601159 254 + 11732439 gtgggcggatcacctgaggtctggagttcaagaccagccttgccaacatggcgaaatcccatctctactaaaaatacaaaaatta-----gctgggcgtggtggcaggcgc-------ctgtaatcccggctactcaggaggctgaggca--------------------------gaggttgtggtgagccgagatcacgccactgcactccagcctgggtgacagagcaaga--ctgtc----tcaaaa----aaaaccccaaa--acccacgaaaaaacaaagattagctgggtatattgg i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e otoGar3.GL873542 22769084 0 + 22939663 C a score=1227746.000000 s hg38.chr20_KI270870v1_alt 16379 159 + 183433 tgcatgcctatagtcccagctgcttgaaaggctgaggtgggagaatcgcttgagcccaggaggtcaagactgcagtgagccgagatcgtgccactgcactccagcctgggtgacggagtggggccctgtcacaa-ggaaaaaa----aaaagaCCAGCGAGAGT s panTro5.chr20 66349437 159 + 66533130 tgcatgcctatagtcccagctgcttgaaaggctgaggtgggagaatcgcttgagcccaggaagtcaagactgcagtgagccgagatcgtgccactgcaccccagcctgggtgatggagtggggccctgtcacaa-ggaaaaaa----aaaagaCCAGCGAGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62028533 159 + 62195757 tgcatgcctatagtcccagctgcttgaaaggctgaggtgggagaatcgcttgagcccaggaagtcaagactgcagtgagccgagatcgtgccactgcaccccagcctgggtgatggagtggggccctgtcacaa-ggaaaaaa----aaaagaCCAGCGAGAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 418060 158 - 578057 tgcatgcctatagtcccagctgcttgaaaggctgaggtgggagaatcgcttgagcccgggaagtcaagactgcagtgagccgagatcgtgccactgcaccccagcctgggtgacggag-ggggccctgtcacaa-ggaagaaa----aaaagaCCAGCGAGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109943249 160 - 110113093 tgcacgcctatagtcacagctgcttgaaaggctgaggtgggagaatcgcttgagcccaggaagtcaaggctgcagtgagccgagatcgtgccactgcaccccagcctgggtgacggagtagggccctgtcacaagggaaaaaa----aaaagaCCAGCGAGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92671228 156 - 92844088 tgcacgcctatagtc-cagctgcttgaaaggctgaggtgggagaatcgcttgagcccaggaagtcaaggctgcagtgagccgagatcgcgccgcggcaccccagcctgggtgacggagtgggaccctgtcacac-g--agaaa----agaagaCCAGCGAGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333745 156 + 96509753 tgcacgcctatagtc-cagctgcttgaaaggctgaggtgggagaatcgcttgagcccaggaagtcaaggctgcagtgagccgagatcgcgccgcggcaccccagcctgggtgacggagtgggaccctgtcacac-g--agaaa----agaagaCCAGCGAGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16805265 156 - 16982598 tgcacgcctatagtc-cagctgcttgaaaggctgaggtgggagaatcgcttgagcccaggaagtcaaggctgcagtgagccgagatcgcgccgcggcaccccagcctgggtgacggagtgggaccctgtcacac-g--agaaa----agaagaCCAGCGAGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3612340 156 - 3785965 tgcacgcctatagtc-cagctgcttgaaaggctgaggtgggagaatcgcttgagcccaggaagtcaaggctgcagtgagccgagatcgcgccgcggcaccccagcctgggtgacggagtgggaccctgtcacac-g--aaaaa----agaagaCCAGCGAGAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90236027 156 - 90373283 tgcacgcctatagtc-cagctgctcgaaaggctgaggtgggagaatcgcttgagcccaggaagtcaagactgcagtgagccgagatcgcgccacggcaccccagcctgggtgacggagtgggaccctgtcacac-g--aaaaa----agaagaCCAGCGAGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 137900 156 + 156971 tgcatgcctatagtt-cagctgcttgaaaggctgaggtgggagaatcgcttgagcccaggaagtcaaggctgcagtgagccgagatcgcgccgcggcaccccagcctgggtgacggagtgggaccctgtcacac-g--aaaaa----agaagaCCAGCGAGAGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5486847 156 - 5823884 tgcacgcctatagtc-ccactgcttgaaaggctgaagtgggagaatcgcttgagcccaggaagtcaaggctgcagtgagccgagatcgcgccacggcaccccagcctgggtgatggagtgggaccctgtcacag-a--aaaaa----agaagaCCAGCGAGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58136468 156 + 159171411 cgcatgcctatagtcccagctacgtgggaggctgaggtgggagaatcgcttgagcccaggaggtcaaggctgcagtgaaccgagatcacg-cactgtac-ccag-ctgggcgacagagtgggaccctgttgtaa-g--aaaaaccccaaaaaaaCA--GAGAGG i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1063360 146 + 1231380 cacatgcctgtagtcccagctacgtgggaggctgaggtgggataactgcttgagcccaggaggtccaggctgcagt---------------cattgcac-ccagcctgggtgacagagtgggaccctgttgcaa-g-aaaaaaacccaaaaaaaCAGTGAGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2601413 159 + 11732439 cgcatgcccatagtcccagctacgtgggaggctgaggtgggagaatggcttgagcccaggacgtcaaggctgcagtgagccgagatcgcg-cactgcac-ccagcctgggtgacggagtgggaccctgctgcaa-g--aaaaaaaccaaaaaaaCAGTGAGAGG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M e otoGar3.GL873542 22769084 0 + 22939663 C a score=177895.000000 s hg38.chr20_KI270870v1_alt 16538 20 + 183433 TCCAGGCCTGGTGTTCTCTA s panTro5.chr20 66349596 20 + 66533130 TCCAGGCCTGGCGTTCTCTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62028692 20 + 62195757 TCCAGGCCTGGCGTTCTCTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 418218 20 - 578057 TCCAGGCCTGGCGTTCTCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109943409 20 - 110113093 CCCAGGCCTGGCGTTCTCTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92671384 20 - 92844088 CCCAGGCCTGGCCTTCTCTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333901 20 + 96509753 CCCAGGCCTGGCCTTCTCTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16805421 20 - 16982598 CCCAGGCCTGGCCTTCTCTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3612496 20 - 3785965 CCCAGGCCTGTCCTTCTCTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90236183 20 - 90373283 CCCAGGCCTGGCCTTCTCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138056 20 + 156971 CCCAGGCCTGGCCTTCTCTA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487003 20 - 5823884 CCCAGGCCTGGCCTTCTCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58136624 20 + 159171411 CTCAGGCCTGGCTTCCTCTA i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1063506 20 + 1231380 CTCAGGCCTGGCTTCCTCTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2601572 20 + 11732439 CGCAGGCCTGGCTTCCTCTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22769084 19 + 22939663 -CCCTGCCCAGCTGCCTCTA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e canFam3.chr24 47543094 0 + 47698779 C e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M a score=2100857.000000 s hg38.chr20_KI270870v1_alt 16558 236 + 183433 AGCA--GGTAATTGGGCAGCTTAGCTCTCTCGAAAGAGATAAGTAATTCAGGGCCAGTTTCCCTCAGAGTGGGAGGTGAATTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGGCCATTTCTCA-TTTAAATTCAGGATTCCCCACCATACCTCGGGGCACCCGCTGCCTCTCTCTTTCCC-CGTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG s panTro5.chr20 66349616 236 + 66533130 AGCA--GGTAATTGGGCAGCTTAGCTCTCTCGAAAGAGATAAGTAATTCAGGGCCAGTTTCCCTCAGAGTGGGAGGTGAATTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGGCCATTTCTCG-TTTAAATTCAGAATTCCCCACCATACCTCGGGGCACCCGCTGCCTCTCTCTTTCCC-CCTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62028712 236 + 62195757 AGCA--GGTAATTGGGCAGCTTAGCTCTCTCGAAAGAGATAAGTAATTCAGGGCCAGTTTCCCTCAGAGTGGGAGGTGAATTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGGCCATTTCTCG-TTTAAATTCAGGATTCCCCACCATACCTCGGGGCACCCGCTGCCTCTCTCTTTCCC-CCTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 418238 236 - 578057 AGCA--GGTAATTGGGCAGCTTAGCTCTCTCGAAAGAGATAAGTAATTCAGGGCCAGTTTCCCTCAGAGTGGGAGGTGAATTCTCCGGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGGCCATTTCTCG-TTTAAATTCAGGATTCCCCACCATGCCTCGGGGCACCCGCTGCCTCTCTCTTTCCC-CCTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109943429 234 - 110113093 AGCA--GGTGATTGGGCAGCTTAGCTATCTCGAAAGAGATAAGTAATTCAGGGCCAGTTTCCCTCAGAGTGGGAGGTGAATTCTCTAGGGAAGC--TGGGAGAAAACGCACTTTATTTATAAAACTGGGAAGGGGCCATTTCTTG-TTTAAATTCAGGATTCCCCACCATGCCTCGGGGCACCCGCTTC--CTCTCTTTCCC-CCTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92671404 234 - 92844088 AGTA--GGTAACTGGGCAGCTTAGCTCTCTCAAAAGAGAAAAGTGATTCAGGGCCGGTTTCTCT--GAGTGGGAGGTGAGTTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGACCATTTCTCG-TTTAAATTCAGGGTTCCCCACCATGCCTCGGGGTACCCGCTGCCTCTCTCGTCCCC-CTTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96333921 234 + 96509753 AGTA--GGTAACTGGGCAGCTTAGCTCTCTCAAAAGAGAAAAGTGATTCAGGGCCGGTTTCTCT--GAGTGGGAGGTGAGTTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGACCATTTCTCG-TTTAAATTCAGGGTTCCCCACCATGCCTCGGGGTACCCGCTGCCTCTCTCGTCCCC-CTTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16805441 234 - 16982598 AGTA--GGTAACTGGGCAGCTTAGCTCTCTCAAAAGAGAAAAGTGATTCAGGGCCGGTTTCTCT--GAGTGGGAGGTGAGTTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGACCATTTCTCG-TTTAAATTCAGGGTTCCCCACCATGCCTCGGGGTACCCGCTGCCTCTCTCGTCCCC-CTTCCAGTCAGCAATGAACTGTCCCCCGGGGAGGTCATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3612516 234 - 3785965 AGTA--GGTAACTGGGCAGCTTAGCTCTCTCAAAAGAGATAAGTGATTCAGGGCCGGTTTCTCT--GAGTGGGAGGTGAGTTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGACCATTTCTCG-TTTAAATTCAGGGTTCCCCACCATGCCTCGGGGTACCTGCTGCCTCTCTCGTCCCC-CTTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90236203 234 - 90373283 AGTA--GGTAACTGGGCAGCTTAGCTCTCTCAAAAGAGATAAGTGATTCAGGGCCGGTTTCTCT--GAGTGGGAGGTGAGTTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGACCATTTCTCG-TTTAAATTCAGGGTTCCCCACCATGCCTCGGGGTACCCGCTGCCTCTCTCTTCCCC-CTTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138076 234 + 156971 AGTA--GGTAACTGGGCAGCTTAGCTCTCTCAAAAGAGATAAGTGATTCAGGGCCGGTTTCTCT--GAGTGGGAGGTGAGTTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGACCATTTCTCG-TTTACATTCAGGGTTCCCCACCATGCCTCGGGGTACCCGCTGCCTCTCTCGTCCCC-CTTCCAGTCAGCAATGAACTGTCCCCAGGGGAGGTCATG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487023 234 - 5823884 AGTA--GGTAACTGGGCAGCTTAGCTCTCTCAAGAGAGATAAGTGATTCAGGGCCAGTTTCTCT--GAGTGGGAGGTGAGTTCTCCAGGGAAGC--TGGGAGAAAACACACTTTATTTATAAAACTGGGAAGGGACCATTTCTCA-TTTAAATTCAGGGTTCCCCACCATGCCTCAGGGTACCCGCTGCCTCTCTCTTCCCC-CTTCCAGTCAGCAACGAACTGTCCCCAGGGGAGGACATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58136644 233 + 159171411 GGTA--GGGAGTTGGGCAGCTTAGCTCTCTCCAAAGAGACAAGAAGTTCAGGGCCAGTTTCCCTCAGCGTGGGAGGTGGATTCTCCAAGGAAGC--CAAGAGAAAACACACTTTATTTGTAAAACTGGGAAGGGGCCATTTCTTG-TTTAGATTCAGGGTTTTCCACCAAGCCAC-GGGCACCCGCTGCGTCTCTCTTCCCC---TCCAGTCAGCACTGAACTGTCCCTGGGGGAGGTCATG i calJac3.chr5 C 0 I 34 s cebCap1.NW_016107870v1 1063526 226 + 1231380 AGTA--GGGAGTTGGGCAGCTTAGCTCTCTCCAGAGAGACAAGCAGCTCAGGGCCAGTTTCCCTCAGAGTGGGAGGTGAATTCTCCAAGGAAGC--CGAGAGAAAACGCACTTTATTTGTAAAACTGGGAGGGGACCATCTCTTG-TTTAGATTCAGGGTTTTCT-----GCCAT-GGGCACCTGC--CGCCTCTCTTCCCC---TCCAGTCAGCACTGAACTGTCCCTAGGGGAGGTCATG i cebCap1.NW_016107870v1 C 0 I 355 s aotNan1.NW_018500483v1 2601592 233 + 11732439 AGTAGGGGGAGCGGGGTGGCTTAGCTCTCTCC--AGAGACAAGCAGTTCCGGGCCAGTTTCCCTCAGAGTGGGAGGTGAATTCTTCAAGGAAGC--CAAGAGAAAACACACTTTATTTGTAAAACTGGGAAGGGGCCATTTCTTG-TTTAGTTTCAGGGTTTCCCACCACACCAC-GGGCACCCGCTGCCTCTCTCTTCCCC---TCCAGTCAGCACTGAACTGTCCCTAGGGGAGGTCATG i aotNan1.NW_018500483v1 C 0 I 34 s otoGar3.GL873542 22769103 237 + 22939663 AGTA--GGTAATTGGGTGGCTTTGCTCTTTGAAAAGAGATGAATGATTCTGGGCCAGTTTTCCCTAGGGTGGGAGGTAGATTCTCCAGGGAAACAGAGAGAGAGAGCACTCTGTGTCTATAAAACTGAGA--GGGCCATCCTACACCCTGGGGTCTAGGATGCTTACCATGCCACTGGACAACCAAAGCCTCTCTGTCTTCCACCACCAGTCAGCACTGAGCCATCTTC-GGGGAGGTCATA i otoGar3.GL873542 C 0 I 32 s canFam3.chr24 47543094 186 + 47698779 AGCA--GGTGACTGAGCAGCTCGGCTC---CTGGAAAGACCAGGGGTTT-GGGCCGCACATCCCCATGGTGGGA----------CCTGGGATGC--CGAGAG----CGCCCTGGATGCATGAAGC------GGGGCAGCTCCCTG-CT-----GCAGGTCTCCCCGCCCCACGGGGGGGCACAGGGT---------TGTGCC-----------GGGATGGCCGGGGCCT--GGGGTGCCTTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M a score=501523.000000 s hg38.chr20_KI270870v1_alt 16794 73 + 183433 TTAGACAGGA-CCATAGACACCG--------GGC--ACCTTAGCTCAGGGCAGGTGAGAGGGGCCAGGGTAGCCAGACTGGGTC s panTro5.chr20 66349852 73 + 66533130 TTAGACAGGA-CCATAGACACCG--------GGC--ACCTTAGCTCAGGGCAGGTGAGAGGGGCCAGGGTAGCCAGACTGAGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62028948 73 + 62195757 TTAGACAGGA-CCATAGACACCG--------GGC--ACCTTAGCTCAGGGCAGGTGAGAGGGGCCAGGGTAGCCAGACTGAGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 418474 73 - 578057 TTAGACAGGA-CCATAGACACCG--------GGC--ACCTTAGCCTAGGGCAGGTGAGAGGGGCCAGGGTAGCCAGACTGGGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109943663 73 - 110113093 TTAGACAGGA-CCATAGACACCG--------GGC--ACCTTAGCTCAGGGCAGGTGAGAGGGGCCAGGGTAGCCAGACTGGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92671638 73 - 92844088 TTAGACAGGG-CCATAGCCACCG--------GGC--ACCTTAGCTCAGGGCAGATGAGAGGGGCCAGGGCAGCCAGACTGGGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96334155 73 + 96509753 TTAGACAGGG-CCATAGCCACCG--------GGC--ACCTTAGCTCAGGGCAGATGAGAGGGGCCAGGGCAGCCAGACTGGGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16805675 73 - 16982598 TTAGACAGGG-CCATAGCCACCG--------GGC--ACCTTAGCTCAGGGCAGATGAGAGGGGCCAGGGCAGCCAGACTGGGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3612750 73 - 3785965 TTAGACAGGG-CCATAGCCACCG--------GGC--ACCTTAGCTCAGGGCAGATGAGAGGGGCCAGGGCAGCCAGACTGGGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90236437 73 - 90373283 TTAGACAGGG-CCATAGCCACCG--------GGC--ACCTTAGCTCAGGGCAGACGAGAGGGGCCAGGGCAGCCACACTGGGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138310 73 + 156971 TCAGACAGGG-CCATAGCCACCG--------GGC--ACCTTAGCTCAGGGCAGATGAGAGGGGCCAGGGCAGCCACACTGGGTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487257 73 - 5823884 TTAGACAGGG-CCATAGCCACCG--------GGC--ACCTTAGCTCAGGGCAGATGAGAGGGGCCAGGGCAACCAGACTGGGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58136911 52 + 159171411 GCAGACAGGG-CCACAGTCA-TG--------GGC--ACCTTAGCTGAGGGCAG--------------------CAGACTGGGTC i calJac3.chr5 I 34 I 3 s aotNan1.NW_018500483v1 2601859 52 + 11732439 GCAGACAGGG-CCACAGACA-TG--------GGC--ACCTTAGCTGAGGGCAG--------------------CAGACTGGGTC i aotNan1.NW_018500483v1 I 34 I 3 s otoGar3.GL873542 22769372 75 + 22939663 GCAGACAGGGTCCCCAGGCATGGCTGAGGGAGGCTGGCCCTGGACTGGAGCAGTTGAGAGGGGC---------CAGATAGGGTT i otoGar3.GL873542 I 32 I 13 s canFam3.chr24 47543280 62 + 47698779 CTGCACCGTG-AGGGAGGCCTCG--------GGC----------TCGGGGGGGTGGGGAAGCCTTGGGGCCACCAGACTTG--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1788671 408 - 2029793 I e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56785096 1090 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M e cebCap1.NW_016107870v1 1063752 355 + 1231380 I a score=446119.000000 s hg38.chr20_KI270870v1_alt 16867 45 + 183433 CTCAGCCACCTCCCAAATACCC--GAACTT-AGGCCCTGAGTCATTCA s panTro5.chr20 66349925 45 + 66533130 CTCAGCCACCTCCCAAATACCC--GAACTT-AGGCCCTGAGTCATTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62029021 45 + 62195757 CTCAGCCACCTCCCAAATACCC--GAACTT-AGGCCCTGAGTCATTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 418547 45 - 578057 CTCAGCCACCTCCCAAATACCC--GACCTT-AGGCCCTGAGTCATTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109943736 45 - 110113093 CTCAGCCACCTCCCAAATACCC--GACCTT-AGGCCCCGAGTCATTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92671711 45 - 92844088 CTCAGCCGCCTCCCGAATACCC--AACCTT-AGGCCCGGAGTCGTTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96334228 45 + 96509753 CTCAGCCGCCTCCCGAATACCC--AACCTT-AGGCCCGGAGTCGTTCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16805748 45 - 16982598 CTCAGCCGCCTCCCGAATACCC--AACCTT-AGGCCCGGAGTCGTTCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3612823 45 - 3785965 CTCAGCCACCTCCCGAATACCC--AACCTT-AGGCCCGGAGTTGTTTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90236510 45 - 90373283 CTCAGCCACCTCCCGAATACCC--AACCTT-AGGCCCGGAGTCGTTCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138383 45 + 156971 CTCAGCCACCTCCCGAATACCC--AACCTT-AGGCCCGGAGTTGTTCG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487330 45 - 5823884 CTCAGCCATCTCCCAAATACCC--TACCTT-GGGCGCTGAGTCATTCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58136966 44 + 159171411 CTCAGCTACCACCC--ATACCT--GACCCTCAGGCCCTGAGTCATTTG i calJac3.chr5 I 3 C 0 s aotNan1.NW_018500483v1 2601914 46 + 11732439 CTCAGCCGCCTCCCAGATACCC--GACCCTGAGGCCCCGAGTCATCTG i aotNan1.NW_018500483v1 I 3 C 0 s micMur3.chr18 56786186 46 + 57149010 CTCAGCCACCTCCCAAATACCCT-ACCCTT-AGGCCCTGAGTCTTTCA i micMur3.chr18 I 1090 I 1197 s proCoq1.NW_012150197v1 1789079 46 - 2029793 CTCAGCCACCTCCCAAATACCCT-GCCCTT-AGCCCCTGAGTCattca i proCoq1.NW_012150197v1 I 408 I 780 s otoGar3.GL873542 22769460 47 + 22939663 CTCAGTCACCTCCCAAATACCCTAACCCTT-AGGCCCTGAGTCATTCA i otoGar3.GL873542 I 13 C 0 s canFam3.chr24 47543342 42 + 47698779 CTCAGTCTGCTCTCGGACACCC--CGCCCC-GGGCTCAGAGCCAT--- i canFam3.chr24 C 0 C 0 e mm10.chr2 181728385 1351 + 182113224 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M e cebCap1.NW_016107870v1 1063752 355 + 1231380 I a score=1803025.000000 s hg38.chr20_KI270870v1_alt 16912 266 + 183433 TCTGCTGCACAAACACTTGCccaggaggactgcggtgagcacaggg--aacaa--ttcctgctctcgtggggctggccctttggtgggggaagcagatggt-------------agatgaaataGTGCAGTGCACTGTGGAGCAGGAGGAAGGGGAGCTCTGGGGG-------CAGCAGGA----GGCCACT----------GGGCCTTGCAGAGAAGGCAACGCTTGTGCTGAAACCCGGAGTGGGTCGGGGAGGCTGG----------GCGAGTGGGGGCAAGGCCCCTGG--------------------GGGAAAGAGGGCCCTTGGGAC s panTro5.chr20 66349970 266 + 66533130 TCCGCTGCACAAACACTTGCccaggaggactgcggtgagcacaggg--aacaa--ttcctgctctcgtggggctggccctttggtgggggaagcagatggt-------------agatgaaataGTGCAGTGCACTGTGGAGCAGGAGGAAGGGGAGCTCTGGGGG-------CAGCAGGA----GTCCACT----------GggccttgcagagaaggcaacgcttgtgctgaaacccggagtgggtgggggagGCTGG----------GTGAGTGGGGGCAAGGCCCCTGG--------------------GGGAAAGAGGGCCCTTGGGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62029066 266 + 62195757 TACGCTGCACAAACACTTGCccaggaggactgcggtgagcacaggg--aacaa--ttcctgctctcgtggggctggccctttggtgggggaagcagatggt-------------agatgaaataGTGCAGTGCACTGTGGAGCAGGAGGAAGGGGAGCTCTGGGGG-------CAGCAGGA----GTCCACT----------GGGCCTTGCAGAGAAGGCAACGCTTGTGCTGAAACCCGGAGTGGGTGGGGGAGGCTGG----------GCGAGTGGGGGCAAGGCCCCTGG--------------------GGGAAAGAGGGCCCTTGGGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 418592 265 - 578057 TCCACTGCACAAACACTTGCCCAGGAGGACTGCGGTGAGCACAGGG--AACAA--TTCCTGCTCTCGTGGGGCTGGCCTTTTGGTGGGGGAAGCAGATGGT-------------AGATGAAATAGTGCAGTGCACTGTGGAGCAGGAGGAAGGGGAGCTCTGGGGG-------CAGCAGGA----GGCCACT----------GGGCCTTGCAGAGAAGGCAACGC-TGTGCTGAAACCCGGAGTGGATGGGGGATGCTGG----------GTGAGTGGGGGCAAGGCCCCTGT--------------------GGGAAAGAGGGCCCTTGGGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109943781 266 - 110113093 TCCATTGCACAAATACTTGCTCAGGAGGACTGTGGTGAACACAGGG--AACAA--TTCTTGCTTTCGTGGGGCTGGCCCTTTGGTGGAGGAGGCAGATGGT-------------GGATGAAATAGTGCAGTGCACTGTGGAGCAGGAGGGAGGAGAGCTCTGGGGG-------CAGCAGGA----GGCCACT----------GGGCCTTGCAGAGAGGGCAACGCTTGTGCTGAAACCTGGAGTGGGTGGGGAAGGCTGG----------GCGAGTGGGGGCAATGCCCCTGG--------------------GGGAAAGAGGGCCCTTGGGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92671756 262 - 92844088 TCCGCTGCACAAATACGTGCccgggaggactgcagtgaacaaaggg---ccaa--ttcctgctctcgt-gggctggccctttggtgggggaggcagatggt-------------ggatgaaagagtgcggtgcactgtggaacaggaggacggggagctctggggg-------gagcagga----ggccacg----------gggcctttcagagaaggcacctcctgtgctgaaacccgga-ggggtgggggaggttgg----------GTGAGTGGGGGCAAGGCCCCTGGNNNNNNNNNNNNNNNNNNNN--------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96334273 263 + 96509753 TCCGCTGCACAAATACGTGCccgggaggactgcagtgaacaaaggg---ccaa--ttcctgctctcgt-gggctggccctttggtgggggaggcagatggt-------------ggatgaaAGAGTGCGGTGCACTGTGGAACAGGAGGACGGGGAGCTCTGGGGG-------GAGCAGGA----GGCCACG----------GGGCCTTTCAGAGAAGGCACCTCCTGTGCTGAAACCCGGA-GGGGTGGGGGAGGTTGG----------GTGAGTGGGGGCAAGGCCCCTGG--------------------GGGAAAGAGGGCCCTTGGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16805793 263 - 16982598 TCCGCTGCACAAATACGTGCccgggaggactgcagtgaacaaaggg---ccaa--ttcctgctctcgt-gggctggccctttggtgggggaggcagatggt-------------ggatgaaAGAGTGCGGTGCACTGTGGAACAGGAGGACGGGGAGCTCTGGGGG-------GAGCAGGA----GGCCACG----------GGGCCTTTCAGAGAAGGCACCTCCTGTGCTGAAACCCGGA-GGGGTGGGGGAGGTTGG----------GTGAGTCGGGGCAAGGCCCCTGG--------------------GGGAAAGAGGGCCCTTGGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3612868 264 - 3785965 TCCACTGCACAAATACGTGCccgggaggactgcagtgaacaaaggg---ccaa--ttcctgctcttgt-gggctgaccctttggtgggggaggcagatggt-------------ggatgaaAGAGTGCAGTGCACTGTGGAACAGGAGGACGGGGAGCTCTGCGGG-------GAGCAGGA----GGCCACG----------GGGCCTTTCAGAGAAGGCACCTCCTGTGCTGAAACCCGGAGGGGGTGGGGGAGGTTGG----------GTGAGTGGGGGCAAGGCCCCTGG--------------------GGGAAAGAGGGCCCTTGGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90236555 264 - 90373283 TCTTCTGCACAAATACGTGCccgggaggactgcagtgaacaaaggg---ccag--ttcctgctctcgt-gggctggccctttggtgggggaggcagatggt-------------ggatgaaataGTGCAGTGCCCTGTGGAACAGGAGGAAGGGGAGCTCTGGGGG-------GAGCAGGA----GGCCACG----------GGGCCTTTCAGAGAAGGCACCTCCTGTGCTGAAACCCGGAGGGGGTGGGGGAGGTTGA----------GTGAGTGGGGGCAAGGCCCCTGG--------------------GGAAAAGAGGGCCCTTGGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138428 263 + 156971 TCCACTGCACAAATACGTGCccgggaggactgcagtgaacaaaggg---ccaa--ttcctgctctcgt-gggctggccctttggtgggggaggcagatggt-------------ggatgaaAGAGTGCAGTGCACTGTGGAACAGGAGGAC-GGGAGCTCTGGGGG-------GAGCAGGA----GGCCACG----------GGGCCTTTCAGAGAAGGCACCTCCTGTGCTGAAACCCGGAGGGGGTGAGGGAGGTTGG----------GTGAGTGGGAGCAAGGCCCCTGG--------------------GGGAAAGAGGGCCCTTGGGGC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487375 265 - 5823884 TCCACTGCACACATATTTGCctgggaggactacagtgaacaaaggg---ccaa--ttcctgctctcgtggggctggccgtttggtgggggaggcagatggt-------------gggtgaaataGTGCAGTGCACTGTGGAACAGGAGGAAGGGGAGCTCTGGGGG-------GAGCAGGA----GGCCACT----------GGGCCTTTCAGAGAAGGCACCTCCTGTGCTGAAACCTGGAGGGGGTGGGGGAGGTTGG----------GTGAGTGGGGGCAAGGCCCCTGG--------------------GGGAAAGAGGGCCCTTGGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58137010 252 + 159171411 CGGGCTGCACAGATACCTGCctgggaggactgcagtgagcaaacgg--aacaa--ttcctgctctcacagggctggccctttggtgggggaggcagatggt-------------ggatgaaatggtgcagggcactgtagggcaggaggagggggagctctggggg-------cagcagga----ggccacc----------gggccttgctgagaaggctactcttgtgctaaaacccagattgggtgggggggg------------------------acaaggcCCCTGG--------------------GGGAAAGAGGGCCCTTGGGGC i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2601960 250 + 11732439 TGGGCTGCACAGATACGTGCctgggaggactgcagtgagcaaaggg--aacaa--tccctgctctcacagggcgggcccgttggtggaggaggcaggcggt-------------GGGTGAAATGGTGCAGGGCGCTGTAGGGCAGGAGGAAGGGGAGCTCTGGGGG-------CAGCAGGA----GGCCACC----------GGGCCTTGCTGAGAAGCCTACTCTTGTGCTGAAACCCAGAGTGGGTGGTGGGGG-------------------------CAAGGCCCC-GG--------------------GGGAAAGAGGGCCCTGGGGGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22769507 202 + 22939663 CCCACTTCACAAATATTTTCctaggaatacagctgcgaacaaagagaaaagga--ctctggctctcacagggctgaccc-ttagtgggggaggcagGAGGT-------------GG---------------GCATAGCAGA-----------GGGGACTCTGGGAG-------AAACAGCA----GG---------------GAGGCTAGCAGGGGAGG-----------------CCAGGA--AATTGGGGGAAG------------------------GCAAGGGCCCCAG--------------------GAAAAGGAGGGCCC-AGGAAT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47543384 286 + 47698779 -CTGCTGCCTGAGTGTTGGGCCAG--AGCTGGCAGGGACCAGGAGG---AGAAGCTTCCTGGCCCCGCGGGGCCGCCCC-------AGGCGGGGAGGTGGTAACACCTGCCCCGGGACGA--------GGCCTGCGGTGGGG-AGGCCGAGACGGAGCCTTGGGCGCCTGTGCGAGGAGGACAGCGGCCACTAGCGAAGGGGGGGTCTTGGGGAGGAAGGGCGCC--GTGCATCTCCCTGCTGGGGGTCCTGGCTCTCGTCCATCCATCCGTCCATCCATGTGGAGGTCTTGA--------------------GGGAA----GACCCCGGTGAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1789125 780 - 2029793 I e mm10.chr2 181728385 1351 + 182113224 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M e cebCap1.NW_016107870v1 1063752 355 + 1231380 I a score=621710.000000 s hg38.chr20_KI270870v1_alt 17178 80 + 183433 CAGGTCCTAAAGCCAGAGGTTCTG-GAGGTGACAGCTGGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGTGGCTGTTGCAG s panTro5.chr20 66350236 80 + 66533130 CAGGTCCTAAAGCCAGAGGTTCTG-GAGGTGACAGCTGGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGTGGCTGTTGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62029332 80 + 62195757 CAGGTCCTAAAGCCAGAGGTTCTG-GAGGTGACAGCTGGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGTGGCTGTTGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 418857 80 - 578057 CAGGTCCTAAAGCCAGAGGTTCTT-GAGGTGACAGCTGGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGTGGCTGTTGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109944047 80 - 110113093 CAGGTCCTAAAGCCAGAGGTTCTG-GAGGTGACAGTTGGGGGAGCAGAGGCCTGAGCAGG--------TTGGT----TAAGTGGCTGTTGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92672018 70 - 92844088 ---------AAGCCAGAGGTTCTG-GAGGTGACAGTTAGGGGAGCAGAGGCA-GAGCAGG--------TTGGG----GAAGAGGCCACTGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96334536 80 + 96509753 CAGGTCCTAAAGCCAGAGGTTCTG-GAGGTGACAGTTAGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGAGGCCACTGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16806056 80 - 16982598 CAGGTCCTAAAGCCAGAGGTTCTG-GAGGTGACAGTTAGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGAGGCCACTGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3613132 80 - 3785965 CAGGTCCTAAAGCCAGAGGTTCTG-GAGGTGACAGTTAGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGAGGCCACTGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90236819 80 - 90373283 CAGGTCCTAAAGCCAGAGGTTCCG-GAGGTGACAGTTAGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGAGGCCATTGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138691 80 + 156971 CAGGTCCTAAAGCCAGAGATTCCG-GAGGTGACAGTTAGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGAGGCCACTGTGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487640 80 - 5823884 CAGGTCCTAAAGCCAGAGGTTCTG-GAGGTGACAGTTAGGGGAGCAGAGGCCTGAGCAGG--------TTGGG----GAAGAGGCCATTGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58137262 79 + 159171411 CAGGTCCTAAGGCCAGAGGTTCTG-GAGGTGACAGCTGGGGGAGCAGAGGCCTGAGCAGG--------TTGG-----GAAGAGGCCATTGCAG i calJac3.chr5 C 0 I 29 s aotNan1.NW_018500483v1 2602210 78 + 11732439 CAGGTCCTAAGGCCAGAGGTTCTG-GAGGTGACAGC-GGGGGAGCAGAGGCCTGAGCAGG--------TTGG-----GAAGAGGCCATTGCAG i aotNan1.NW_018500483v1 C 0 I 30 s otoGar3.GL873542 22769709 64 + 22939663 CAGGTTCTCAGGTTAGAGGTT-----------------GGGGAGTAAGGGGCTGAGCAGA--------TTGAG----GAAGAAGCGGTTATAG i otoGar3.GL873542 C 0 I 36 s mm10.chr2 181729736 86 + 182113224 CAGGGCTTCAGACCAGAAGTTCTGTGGGGCAAGAGT--AAGGAACAGGAGTCTTTGCAGGATCCTTTCTTAGGGATTGAAGAGGACAG----- i mm10.chr2 I 1351 C 0 s canFam3.chr24 47543670 57 + 47698779 ---------------CAGGGTCTGTGAGGTGAGGGTGGGAGGGCCAAGG--------AGC--------CCAGG----GGACGGTCCTTGGCA- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1789125 780 - 2029793 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M e cebCap1.NW_016107870v1 1063752 355 + 1231380 I a score=352059.000000 s hg38.chr20_KI270870v1_alt 17258 39 + 183433 GGAAGCCGGAGGTCACGGTGGC---GTG-----TAG-G-TCTGCCTGCC s panTro5.chr20 66350316 39 + 66533130 GGAAGCCGGAGGTCACGGTGGC---GTG-----TAG-G-TCTGGCTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62029412 39 + 62195757 GGAAGCCGGAGGTCACGGTGGC---GTG-----TAG-G-TCTGGCTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 418937 39 - 578057 GGAAGCCGGAGGTCATGGTGGC---GTG-----TAG-G-TCTGGCTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109944127 39 - 110113093 GGAAGCCGGAGGTCACGGTGGC---ATG-----TAG-G-TCTGGCTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92672088 39 - 92844088 GGAAGCCGGAGGTCACGGTGGT---GTG-----TAG-G-TCTGGCTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96334616 39 + 96509753 GGAAGCCGGAGGTCACGGTGGT---GTG-----TAG-G-TCTGGCTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16806136 39 - 16982598 GGAAGCCGGAGGTCACGGTGGT---GTG-----TAG-G-TCTGCCTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3613212 39 - 3785965 GGATGCTGGAGGTCACGGTGGC---GTG-----TAG-G-TCTGGCTGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90236899 39 - 90373283 GGAAGCCGGAGGTCACGGTGGC---GTG-----TAG-G-TCTGGCTGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138771 39 + 156971 GGAAGCCGGAGGTCACGGTGGC---GTG-----TAG-G-TCTGGCTGCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487720 39 - 5823884 GGAAGCTGGAGGTCACGGTGGC---ATG-----TAG-G-TCTGGCTGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58137370 39 + 159171411 GGAAGCTGGAGGTCAGGATGGC---GTG-----TGG-GTTCCGGCTGC- i calJac3.chr5 I 29 C 0 s cebCap1.NW_016107870v1 1064107 39 + 1231380 GGAAGCCGGAGGTCAGGATGGC---GTG-----TGG-G-TCTGGCTGCC i cebCap1.NW_016107870v1 I 355 I 50 s aotNan1.NW_018500483v1 2602318 39 + 11732439 GGAAGCCGGAGGTCAGGATGGT---GTG-----TGG-G-TCTGGCTGCC i aotNan1.NW_018500483v1 I 30 C 0 s otoGar3.GL873542 22769809 33 + 22939663 AGAGGTCAGAGGTCAGGATGGC---ATG-----CAGAG-TCT------- i otoGar3.GL873542 I 36 C 0 s mm10.chr2 181729822 43 + 182113224 GGAGACCAGAGGTTGGGGTGAT---GTTTGTCCTGA-G-TCATGAGGC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47543727 35 + 47698779 GGAGCCCTGGGGACATGAGGGCCGGGAG-----GAG-G-ACA------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1789125 780 - 2029793 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M a score=549434.000000 s hg38.chr20_KI270870v1_alt 17297 77 + 183433 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCTGCAAGTAGGGGTTTACAGGGCTACTGGGGCTGGGGCACCGAGGC s panTro5.chr20 66350355 77 + 66533130 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCTGCAAGTAGGGGTTTACAGGGCTACTGGGGCTGGGGCACCGAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62029451 77 + 62195757 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCTGCAAGTAGGGGTTTACAGGGCTACTGGGGCTGGGGCACCGAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 418976 77 - 578057 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCTGCAAGTGGGGGTTTACAGGGCTACTGGGGCTGGGGCACCGAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109944166 76 - 110113093 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTTGGC-AGTAGGGGTTTACAGGGCTACTGGGGCTGGGGCACCGAGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92672127 76 - 92844088 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCGGC-AGCCTGGGTTTACAGGGCTGCTGGGGCTGGGGCACTGAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96334655 76 + 96509753 TGTGGGCAGCCCCCA------CCCTGACCAAGGCATTCGGC-AGCCTGGGTTTACAGGGCTGCTGGGGCTGGGGCACTGAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16806175 76 - 16982598 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCGGC-AGCCTGGGTTTACAGGGCTGCTGGGGCTGGGGCACTGAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3613251 76 - 3785965 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCGGC-AGCCTGGGTTTACAGGGCTGCTGGGGCTGGGGCACTGAGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90236938 76 - 90373283 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCGGC-AGCCAGGGTTTACAGGGCTGCTGGGGCTGGGGCACTGAGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138810 76 + 156971 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCGGC-AGCCTGGGTTTACAGGGCTGCTGGGGCTGGGGCACTGAGGC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487759 76 - 5823884 TGTGGGCAGCCCCCA------CCCTGACCAAGGCCTTCGGC-AGCCAGGGTTTACAGGGCTGCTGGGGCTGGGGCACTGAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58137409 73 + 159171411 TGT-GGCAG-CTCTG------CCCTGACCACGGCCTTTGGC-AGCAGGGGCTTGCAGGGCTCCT-GGGCTGTGGCTCCAAGGC i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2602357 73 + 11732439 TGT-GGCAG-CTCTG------CCCTGACCACGGCCTTTGGC-AACAGGGGCTTGCAGGGCTCCT-GGGCTGTGGCTCTGAGGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22769842 66 + 22939663 TGTGGGCAG----CA------CCCTGGTCAAGGCCTTCAGG-AGTCAGGGTCTGCAGAGCAACTGGGGTGTGGAGTC------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181729865 60 + 182113224 TATGGACAGCTTCAA------GTTCAA--AAAGCAGGAGGC-A------------AGGTCTGGTTTGGT--GGACTCTGAGGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47543762 72 + 47698779 ---GGGCAGCGCCCAGAGCGCAACTGGC--AGGTCTTGG---AGGCAGGGT---CAAGGCAGCCCGGGCTGCGGCTTGGACGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1789125 780 - 2029793 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M e cebCap1.NW_016107870v1 1064146 50 + 1231380 I a score=513566.000000 s hg38.chr20_KI270870v1_alt 17374 54 + 183433 CTCCCTCTCATCTCTGAACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACAT----- s panTro5.chr20 66350432 54 + 66533130 CTCCCTCTCATCTCTGAACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACAT----- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62029528 54 + 62195757 CTCCCTCTCATCTCTGAACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACGT----- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 419053 54 - 578057 CTCCCTCTCGTCTCTGAACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACAT----- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109944242 54 - 110113093 CTCCCTCTCATCTCTCAACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACAT----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92672203 54 - 92844088 CTCCCTCTCATCTCTGGACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACGT----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96334731 54 + 96509753 CTCCCTCTCATCTCTGGACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACGT----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16806251 54 - 16982598 CTCCCTCTCATCTCTGGACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACGT----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3613327 54 - 3785965 CTCCCTCTCATCTCTGGACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACGT----- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90237014 54 - 90373283 CTCCCTCTCATCTCTGGACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACGT----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138886 54 + 156971 CTCCCTCTCATCTCTGGACCTCATCTGCTGAAGCTG------------------TGCCTGC--CCTACCCACGT----- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487835 54 - 5823884 CTCCCTCTCATCTCTGGACCTCATCTGCTAAAGCTG------------------TGCCTGC--CCTACCCACGT----- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58137482 54 + 159171411 CTCCCTCTCATCTCTGAGCCTCCTCTGCTGAAGCTG------------------TGCCTGC--ACTACCCACAT----- i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1064196 53 + 1231380 CTCCCTCTCCTCTCTGAGCCTCATCTGCTGAAGCTG------------------TGCCTGC--CCTCCCCACA------ i cebCap1.NW_016107870v1 I 50 C 0 s aotNan1.NW_018500483v1 2602430 54 + 11732439 CTCCCTCTCATCTCTGAGCCTCATCTGCTGAAGCCT------------------TGTCTGC--CCTACGCACAC----- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22769908 39 + 22939663 CTCCATTTTCTCT--------------CTAAAGCTA------------------AGCCTGC--CTTGC-CATGT----- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181729925 74 + 182113224 CTCTCTCTGGTTTTCAGTTCTCCTCTATCAAAGCTGGAGATTAAAGCTGGTGGTTGTCTGCTTCCTACCCCCAT----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47543834 40 + 47698779 --------CTGCTCGTGGCCT-----------GCGG------------------GGCCTGC--CCTGCCCACGGGCGCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1789125 780 - 2029793 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16202121 911 + 16356641 M a score=3392187.000000 s hg38.chr20_KI270870v1_alt 17428 361 + 183433 GCCTCCTGCCGCCCCAGGCGCGTGTAGGCGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGATCCCATCGTGACTGAAGCACGCAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCCCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTCTTGGGGCT--GGGAGGGTTGCTTAAATCAATTATCA-AAGCGCTTGCAGCCTCCTGCTCACTCAC-----AAAGACCCGAATCCAAGCACA--GGACAGCAG-------------GCCCCCAGGACAGTCTTCCCCAGTGGTGACTGCTCCCTGTTCTCCTTGCCTTGTCCAGTCCCAGGCCCTAATAACCAGGCATAGGCCCTGGAATGGGCCCGCCCTGAGTTTGGAAGCTTCCAGGTGCTCTCT-GGAGGCACAA s panTro5.chr20 66350486 361 + 66533130 GCCTCCTGCCGCCCCAGGCGCGTGTAGGCGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGATCCCATCGTGACTGAAGCACGCAGACAGGAAGGAGG-GTGACTGTTCCCT--AGGGCCCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTCTTGGGGCT--GGGAGGGTTGCTTAAATCAATTATCA-AAGCGCTTGCAGCCTCCTGCTCACTCAC-----AAAGGCCCGAATCCAAGCACA--GGACGGCAG-------------GCCCCGAGGACAGTCTTCCCCAGTGGTGACTGCTCCCTGTTCTCCTTGCCTTGTCCAGTCCCAGGCCCTAATAACCAGGCATAGGCCCTGGAATGGGCCCGCCCTGAGTTTGGAAGCTTCCAGGTGCTCTCT-GGAGGCACAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62029582 361 + 62195757 GCCTCCTGCCGCCCCAGGCGCGTGTAGGCGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGATCCCATCGTGACTGAAGCACGCAGACAGGAAGGAGG-GTGACTGTTCCCT--AGGGCCCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTCTTGGGGCT--GGGAGGGTTGCTTAAATCAATTATCA-AAGCGCTTGCAGCCTCCTGCTCACTCAC-----AAAGGCCCGAATCCAAGCACA--GGACGGCAG-------------GCCCCCAGGACAGTCTTCCCCAGTGGTGACTGCTCCCTGTTCTCCTTGCCTTGTCCAGTCCCAGGCCCTAATAACCAGGCATAGGCCCTGGAATGGGCCCGCCCTGAGTTTGGAAGCTTCCAGGTGCTCTCT-GGAGGCACAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 419107 361 - 578057 GCCTCCTGCCGCCCCAGGCGCGTGTAGGCGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGATCCCATCGTGACTGAAGCATGCAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCCCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTCTTGGGGCT--GGGAGGGTTGCTTAAATCAATTATCA-AAGCGCTTGCAGCCTCCTGCTCACTCAC-----AAAGGCCCGAATCCAAGCACA--GGACGGCAG-------------GCCTCCAGGACAGTCTTTCCCAGTGGTGACTGCTCCCTGTTCTCCTTGCCTTGTCCAGTCCCAGGCCCTAATAACCAGGCATAGGCCCTGGAATGGGCCCGCCCTGAGCTCGGAAGCTTCCAGGTGCTCTCT-GGAGGCACAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109944296 361 - 110113093 GCCTCCTGCCGCCCCAGGCGTGTGTAGGCGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGATCCCATCGTGACTGAAGCATGCAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCTCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTCTTGGGGCT--GGGAGGGTTGCTTAAATCAATTATCA-AAGCGCTCGCAGCTTCCTGCTCACTCAC-----AAAGGCCCCAATCCAAGCACA--GGAGGGCGG-------------GCCCCCAGGACAGTCTTCCCCAGTGGTGACTGCTCCCTGTTCTCCTTGCCTTGGCCAGTCCCAGGCCCTAATAACCAGGAATAGGCCCTGGAATGGGCCCGCCCTGAGCTTGGAAGCTTCCAGGTGCTCTCT-GGAGGCTCAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92672257 391 - 92844088 GCCTCCTACCGCCCCAGGCGCGTGTAGGTGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGCTCCCATCGTGACTGAGGCACGCAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCCCA--------------------------------GGCCTGTCTCCTCCTGGGGCTGGGAGG--------------------------------GCCCAGGCCTGTCTCCTCCTGGGGCT--GGGAGGGCTGCTCAAATCAATTACCA-AAGCGGCTGCAGCCTCCTGCTCACTCAC-----AAAGGCCCCAGTCCAAGCGCA--GGAGGGCGG-------------GTCCCCTGGACAGTC-TCCCCAGTGGTGACTGCTGCCTGTTCTCCTTGCCTTGGCCAGTCCCAGGCCCTAATAACCAGGAATAGGCTCTGGAATGGGCCCGCCCTGAGCTCAGAAGCTTCCAGGTGCTCTCT--GAGGCTCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96334785 391 + 96509753 GCCTCCTACCGCCCCAGGCGCGTGTAGGTGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGCTCCCATCGTGACTGAGGCACGCAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCCCA--------------------------------GGCCTGTCTCCTCCTGGGGCTGGGAGG--------------------------------GCCCAGGCCTGTCTCCTCCTGGGGCT--GGGAGGGCTGCTTAAATCAATTACCA-AAGCGGCTGCAGCCTCCTGCTCACTCAC-----AAAGGCCCCAGTCCAAGCGCA--GGAGGGCGG-------------GTCCCCTGGACAGTC-TCCCCAGTGGTGACTGCTGCCTGTTCTCCTTGCCTTGGCCAGTCCCAGGCCCTAATAACCAGGAATAGGCTCTGGAATGGGCCCGCCCTGAGCTCAGAAGCTTCCAGGTGCTCTCT--GAGGCTCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16806305 423 - 16982598 GCCTCCTACCGCCCCAGGCGCGTGTAGGTGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGCTCCCATCGTGACTGAGGCACGCAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCCCAGGCCTGTCTCCTCCTGGGGCTGGGAGGGCCCAGGCCTGTCTCCTCCTGGGGCTGGGAGG--------------------------------GCCCAGGCCTGTCTCCTCCTGGGGCT--GGGAGGGCTGCTTAAATCAATTACCA-AAGCGGCTGCAGCCTCCTGCTCACTCAC-----AAAGGCCCCAGTCCAAGCGCA--GGAGGGCGG-------------GTCCCCTGGACAGTC-TCCCCAGTGGTGACTGCTGCCTGTTCTCCTTGCCTTGGCCAGTCCCAGGCCCTAATAACCAGGAATAGGCTCTGGAATGGGCCCGCCCTGAGCTCAGAAGCTTCCAGGTGCTCTCT--GAGGCTCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3613381 423 - 3785965 GCCTCCTACCGCCCCAGGCGCGTGTAGGTGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGCTCCCATCGTGACTGAGGCACACAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCCCA--------------------------------GGCCTGTCTCCTCCTGGGGCTGGGCGGGCCCAGGCCTGTCTCCTCCTGGGGCTGGGAGGGCCCAGGCCTGTCTCCTCCTGGGGCT--GGGAGGGCCGCTTAAATCAATTACCA-AAGCGGCTGCAGCCTCCTGCTCACTCAC-----AAAGGCCCCAGTCCAAGCGCA--GGAGGGCAG-------------GTCCCCAGGACAGTC-TCCCCAGTGGTGACTGCTGCCTGTTCTCCTTGCCTTGGCGAGTCCCAGGCCCTAATAACCAGGAATAGGCTCTGGAATGGGCCCGCCCTGAGCTCAGAAGCTTCCGGGTGCTCTCT--GAGGCTCAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90237068 360 - 90373283 GCCTCCTACCGCCCCAGGCGTGTGTAGGTGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGCTCCCATCGTGACTGAGGCACGCAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCCCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTCCTGGGGCT--GGGAGGGTTGCTTAAATCAATTACCA-AAGCGGCTGCAGCCTCCTGCTCACTCAC-----ACAGGCCCCAGTCCAAGTGCA--GGAGGGCGG-------------GTCCCCAGGACAGTC-TCCCCAGTGGTGACTGCTGCCTGTTCTCCTTGCCTTGGCCAGTCCCAGGCCCTAATAACCAGGAATAGGCTCTGGAATGGGCCCGCCCTGAGCTCAGAAGCTTCCGGGTGCTCTCT-GGAGGCTCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 138940 423 + 156971 GCCTCCTACCGCCCCAGGCGCGTGTAGGTGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGCTCCCATCGTGACTGAGGCACGCAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCCCAGGCCTGTCTCCTCCTGGGGCTGGGAGGGCCCAGGCCTGTCTCCTCCTGGGGCTGGGAGGGC--------------------------------CCAGGCCTGTCTCCTCCTGGGGCT--GGGAGGGCTGCTTAAATCAATTACCA-AAGCGGCTGCAGCCTCCTGCTCACTCAC-----AAAGGCCCCAGTCCAAGCGCA--GGAGGGCGG-------------GTCCCCAGGACAGTC-TCCCCAGTGGTGACTGCTGCCTGTTCTCCTTGCCTTAGCCAGTCCCAGGCCCTAATAGCCAGGAATAGGCTCTGGAATGGGCCCGCCCTGAGCTCAGAAGCTTCCGGGTGCTCTCT--GAGGCTCAA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5487889 361 - 5823884 GCCTCCTACCGCCCCAGGCGCGTGTAGGTGGCAG------GCTC------AGGGAGCCTGG-TGCAAAGCTCCCATCGTGACTGAAGCACGCAGACAGGAAGGAGG-GCGACTGTTCCCT--AGGGCCCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTCTTGGGGCT--GGGAGGGTTGCTTAAATCAATTACCA-AAGCGGCTGCAGCCTCCTGCTCACCCAC-----AAAGGCCCCAATCCAAGCACA--GGAGGGCGG-------------GTCCCCAGGACAGTCTTCCCCAGTGGTGACTGCTGCCTGTTCTCCTTGCCTTGGCCAGTCCCAGGCCCTAATAACCAGGAATAGGCTCTGGAATGGGCCTGCCCTGAGCTCAGAAGCTTCCAGGTGCTCTCT-GGAGGCTCAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58137536 360 + 159171411 GCCTCCTGCTGCCCCAGGCACGTGTAGGCAGCAG------ACTC------GAGAAGGCTGG-TACAAAGCTCCCGTCGTGACTGAAACATGCAGACAGGAAGGAGG-GCGACTGCTCCCT--AGGGCCCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTTGTGGGGCT--GGGAGGGTTGTTTAAATCAATTACCA-AAGCACTTGCAGCCTCCTGCTCACCCAC-----AAAGGCCCCAATCCAAGTACA--GGAGGGCGG--------------CCCCCAGGACAATGTTTCCCAGTGGGGACTGCTCCCTGTTCTTCTTGCCCTGGCCAGTCCAAGACCCTAATAACCAGGAATAGGCCGGGAAAGGGCCCCACCCTGTGCTCAGGAGCCTCCAGGTGCTCTCT-CGAAGCTCAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16203036 344 + 16356641 GCCTCCTGCCGCCCCAGGCACGTGTAGGCAGCAG------GCTC------AACGAGGCTGG-TACAAAGCACCCATCGTGACTGAGACGCGCAGACAGGAAGGAGG-GTGGCTGCTCCCC--AGGGCCCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTCTTGGGGCT--GGGAGGGTTGTTTAAATCGA-------------TTGCAGCCTCCTGCTCACCTAC-----AAAGGCCCCAATCCAAGCACA--GGAGAATGG---------------CCTCAGGACAATGTTCCCCAGTGGGGACTGCTCCCTGTTCTTTTT---CTGGCCAGTCCAAGACCCCAATAACCAGGAATAGGCCCGGAGAGGGCCCCGCCCTGTGCTCAGGAGCCTGCAGGTGCTCTCT-CGAAGCTCAA i saiBol1.JH378156 M 911 C 0 s cebCap1.NW_016107870v1 1064249 360 + 1231380 GCCTCCTGCCGCCCCAGGCACATGTAGGCAGCAG------GCTC------AAGGAGGCTGG-TACAAAGCTCCCGTCGTGACTGAAACACGCAGACAGGAAGGAGG-GCGACTGCTCCCT--AGGGCCCA------------------------------------------------------------------------------------------------GGCCTGTCTCCTCTTGGGGCT--GGGAGGGTTGTTTAAATCAATTACCA-AAGCGCTTGCAGCCTCCTGCTCACCCAC-----AAAGGCCCCAATCCAAGCACA--GGAGGGCGG--------------CCCCCAGGACAGTGTTCCCCAGTGGGGACTGCTCCTTGCTCTCCTTGCTCTGGCCAGTCCAAGACCCCAATAACCAGGAATAGGCCTGGAAAGGGCCTTGCCCTGTGCTCAGGAGCCTCCAGGTGCTTTCT-CAAAGCTCAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2602484 359 + 11732439 GCCGCCCACCGCCCCAGGCACGTGTAGGCAGCAG------GCTC------AGGGAGGCTGG-TACAAAGCTCCCGTCGTGACTGAAACACGCAGACAGGAAGGAGG-GCGACTGCTCCCT--AGGGCCCA------------------------------------------------------------------------------------------------GGTCTGTCTCCTTGTGGGGCT--GGGAGGGTTGTTTAAATCAATTACCA-AAGCGCTTGCAGCCTCCTGCTCACCCAC-----AAAGGCTCCAATCCAAGCACA--GGAGGGTGG--------------CCCCCAGGACGATGTTCCCCAGTGGGGACTGCTCCCTGTTCTTCTTGCCCTGGCCAGTCCAAGACCCCAATAACCAGGAATAGGCCCGGAAAGGGCCCCGCCCTGTGCTCA-GAGCCTCCAGGTGCTCTCT-CGAAGCTCAA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22769947 295 + 22939663 GTCCCTAGCCCCATGGGGTGTATGTAGGCAGCAG------GTTCCAGCTGAGGAAACCTGGCTGCAAATCTTCCATTATGACTGAAATACACAAACAGGAAGAGGGTAAGATTGCTCCTTTGAGGGCCCA------------------------------------------------------------------------------------------------GGACCAGCTC-----AGGGATGAGGGTGGGTTGTTTGAGTCAATTACCA-AGGCATGTGATGCTTCCTCCCACCCCAC-----AAGAGCCCCAGTCTAAGCAGA--GGAGTGCAG-------------------------------CCCAGCACTGGTTG-TGCCCCTCCTCCATG-----------CCCAGGCCCCAGCAACCAGCAATTGGTT----------------CTGTGCTCAGAG---------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181729999 347 + 182113224 -------------GTGTGCTTGTATAGGTGGCCAGTCCCTGCTC------TGGGAATCTGCCTGTTAAGCTTCCAGGATGACTTAG---TGCTAACTGGAAGGAGC-AT-ATTACTCCCC--CGGGCCTC------------------------------------------------------------------------------------------------AGCACTTATACTC--AGTGCT-----AGGATTGTTTAATGCAATTAAGGTAAGTGCTTACAGTCTTCCCCTCTCCCCTGCCTGAAGAACCTCCATCAGAGAGAAACGGTGGGAGGAAATGAGCACAGCAACTCAGGGGCAATCTT--CCAGTGGTA------GCATTTCCTCCCACCCTGGCCCAGAGCCA-------------AGGCAGATGCCAGGAAATGGTCCCCACCTTGGGTTAGTGGCAGGTGGCTGCTCTCACCTTTGCCTAA i mm10.chr2 C 0 I 8 s canFam3.chr24 47543874 235 + 47698779 GCCTCTTGCC-CTCCAGACACAAGCTG--AGAAG------TTTC------TAGATCTCTTG-CAC------------------------TCCAGGCAGGAAGGAGG-CAGCCCGGCCCTT--GTCAGCCG------------------------------------------------------------------------------------------------G----------------------GGGGGGGTCATTCGGGTCCAGTCCCA-GAGAGCTCAC----TCGTGCTGCCGCCC-----CAACACGC-------AGCCCA--GGAGGCCGG--------------GGGCGAGGACAGACAGCAGCAG-----------GCGTGCGCAGCTTCACGGGGC----------------------GGCAT---------------CCCCCCCGCTGCCTGGGCTCCCACAG-------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1789125 780 - 2029793 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=446421.000000 s hg38.chr20_KI270870v1_alt 17789 38 + 183433 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- s panTro5.chr20 66350847 38 + 66533130 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62029943 38 + 62195757 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 419468 38 - 578057 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109944657 38 - 110113093 TCCCA---------------------GAGGGTGTCACTGAGGAGGTGTCACTGTGCCTG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92672648 38 - 92844088 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335176 38 + 96509753 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16806728 38 - 16982598 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3613804 37 - 3785965 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGCCACTGTG-CTG--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90237428 38 - 90373283 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 139363 37 + 156971 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTG-CTG--- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488250 35 - 5823884 -CCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACT-TGCCT---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58137896 38 + 159171411 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16203380 38 + 16356641 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1064609 38 + 1231380 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2602843 38 + 11732439 TCCCA---------------------GAGGGCTTCACTGAGGAGGTGTCACTGTGCCTG--- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1789905 38 - 2029793 TCCCA---------------------GAGGGCTCTGCTGAGGAGGTGTCACTGAGCCTG--- i proCoq1.NW_012150197v1 I 780 I 560 s otoGar3.GL873542 22770242 19 + 22939663 CCCCA---------------------GCA-------------------CTCTGGGCCTG--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181730354 59 + 182113224 TCCCAGGGCTTCACCTTTTTACTGTGGAGGGTTTCACCGAAGACTGCCCACTGTACTCA--- i mm10.chr2 I 8 C 0 s canFam3.chr24 47544109 41 + 47698779 CCACA---------------------ACAGGCCCCGCTGGGAGCTGATCCCCCCGCCCCCCT i canFam3.chr24 C 0 C 0 e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=2072506.000000 s hg38.chr20_KI270870v1_alt 17827 207 + 183433 GCCTCAG--GGCCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGTCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTCTCACTCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CGGAGATC---------GTGGGCAGAGTGGGCAGGCAGGTGC-AGGCGCCTTTGAGTCTCCAGGGGAGGGGGTTATTCAGGTGTGTCAGTGCGTGTGGACACACATGTGGCT s panTro5.chr20 66350885 207 + 66533130 GCCTCAG--GGCCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGTCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTCTCACTCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CGGAGATC---------GTGGGCAGAGTGGGCAGGCAGGTGC-AGGCGCCTTTGAGTCTCCAGGGGAGGGGGTTATTCAGGTGTGTCAGTGCGTGTGGACACACATGTGGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62029981 207 + 62195757 GCCTCAG--GGCCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGTCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTCTCACTCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CGGAGATC---------GTGGGCAGAGTGGGCAGGCAGGTGC-AGGCGCCTTTGAGTCTCCAGGGGAGGGGGTTATTCAGGTGTGTCAGTGCGTGTGGACACACATGTGGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 419506 207 - 578057 GCCTCAG--GGCCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGTCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTCTCACTCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CGGAGATC---------ATGGGCAGAGTGGGCAGGCAGGTGC-AGGCGCCTTTGAGTCTCCAGGGGAGGGGGTTATTCAGGTGTGTCAGTGCGTGTGGACACACATGTGGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109944695 205 - 110113093 GCCTCAG--GCCCATGTCC-----CTGGGTGATC---------------------TCAGCGTGTCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTGTCACCCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CGGAGATC---------GTGGGCAGAGTGGGCAGGCAGGTGC-AGGCGCCTTTGGGTCTCTGGGGGAGGGGG-TATTCA-GCGTGTCAGTGTGTGTGGGCACACATCTGGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92672686 205 - 92844088 GCCTCAG--GGGCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGGCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTCTCACCCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CAGAGATC---------GTGGGCAGGGTGGGCAGGCAGGTGC-AGGCGC--CTGAGTCTCTGGGGGAGGGGGTTACTCAGGCATGTCGGTGCATGTGGACACACATCTGGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335214 207 + 96509753 GCCTCAG--GGGCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGGCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTCTCACCCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CAGAGATC---------GTGGGCAGGGTGGGCAGGCAGGTGC-AGGCGCCTCTGAGTCTCTGGGGGAGGGGGTTACTCAGGCATGTCGGTGCATGTGGACACACATCTGGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16806766 207 - 16982598 GCCTCAG--GGGCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGGCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTCTCACCCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CAGAGATC---------GTGGGCAGGGTGGGCAGGCAGGTGC-AGGTGCCTCTGAGTCTCTGGGGGAGGGGGTTACTCAGGCATGTCGGTGCATGTGGACACACATCTGGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3613841 207 - 3785965 GCCTCAG--GGGCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGGCTGGAGATGTAGG-------AGCGGGCTGGAGGGGGTCTCACCCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CAGAGATC---------GTGGGCAGGGTGGGCAGGCAGGTGC-AGGCGCCTCTGAGTCTCTGGGGGAGTGGGTTACTCAGGCATGGCGGTGCATGTGGACACACATCTGGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90237466 214 - 90373283 GCCTCAG--GGGCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGGCTGGAGATGTAGG-------AGAGAGCTGGA-GGGGTCTCACCCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CAGAGATCgtgggcagggtgggcagggtgggcaggCAGGTGC-AGGCGCCTCTGAGTCTCT-GGGGAGGGGGTTACTCAGGCATGTCGGTGCACGTGGACACACATCTGGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 139400 207 + 156971 GCCTCAG--GGGCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGGCTGGAGATGTGGG-------AGAGGGCTGGAGGGGGTCTCACCCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CAGAGATC---------GTGGGCAGGGTGGGCAGGCAGGTGC-AGGCGCCTCTGAGTCTCTGGGGGAGGGGGTTACTCAGGCATGTCGGTGCATGTGGACACACATCTGGGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488285 207 - 5823884 GCCTCAG--GGGCGTGTCC-----CTGGGTGATC---------------------TCAGTGTGGCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTCACACCCTGTCCTCAGGGCTGGGAGCAGCTGTGGCCACT----CAGAGATC---------GGGGGCAGGGTGGGCAGGCAGGTGC-AGGCGCCTTTGAGTCTCTGGGGGAGGGGGTTACTCGGGCATGTCGGTGCATGTGGACGCACATCTGGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58137934 206 + 159171411 TCCTTGG--GGGCGTGTTC-----ATGGGTGATC---------------------TCAGTGTGGCTAGAAATGTAGG-------AGAGGGCTGGAGGGGGTCTCATCCTGTCCTCAGGGCTGGGAGCAGCCGCGGCCTCC----TGGAGATC---------GTGGGCAGGGTGGACAGGCAGGTGC-AAGCACCTTTGAGTCTCCGAGGGAG-GGGTTACTCAGGCATGTCAGTGCATGTGGACACACATCTGGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16203418 201 + 16356641 TCCTCGG--GGGCGTGTTC-----CTGGGTGATC---------------------TCAGTGTGGCTGGAGATGTAAG-------AGAGGGCTGGAGGGGGTCTCATCCTGTCCTCAGGGCTGGGAGGATCCGCGGCCTCC----T-----TT---------GTGGGCAGGGTGGGCAGGCAGGTGC-AGGCACCTTTGAGTCTCCGGAGAAG-GGGTTACTCAGGCATGTCAGTGCATGGGGACACACATCTGGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1064647 206 + 1231380 TCCTCGG--GGGCATGTTC-----CTGGGTGATC---------------------TCAATGTAGCTGGAGATGTAGG-------AGAGGGCTGGAGGGGGTCTCGTCCTGTCCTTAGGGCTGGGAGCAGCTGCGGCCTCC----TGGAGATC---------GTGGGCAGGGTGGGCAGGCAGGTGC-AGGCACCTTTGAGTCTCTGGGGGAG-GGGTTGCTCAGGCATGTCAGTGCCTGTGGACACACATCTGGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2602881 196 + 11732439 TCCTCAG--GGGCGTGTTC-----CTGGGTGATC---------------------TCAGTGTGGCTGGAGATGTA-----------------GGAGGGGGTCCCATCCTGTCCTCAGGGCTGGGAGCAGCCGTGGCCTCC----TGGAGATT---------GTGGGCTGGGTGGGCAGGCAGGTGC-AGGCACCTTTGAATCTCCGGGGGAG-GGGTTACTCGGGCGTGTCAGTGCATGTGGACATACATCTGGGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22770261 179 + 22939663 GCCTTGGGTGGCCTCATACACA--CAAAGTGATA--------------------GCCAGTGTGGTTGGAGATGTAGA-------AAGGAAT--GACAGCATCTCATCCTGTTCCCA-GGCTGGAAGAAGTTGTGGTCACT----TGGGGGTC---------ACAGGTATGGTGGGCA-----------------------------TGGACCGGGATCACTCGGGCAC-TCCATGCA-GTGAACTTGCATGTGG-T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181730413 216 + 182113224 -GCTGTA--GGGAATGTCC-----CTGGG-GATCTTTATGCACACTAAAGGGTAGTCAGCATAGCTGG---TGTAGAGTCAGATGAAGAGTTGGAGG-------ATTGTATATATACAGTTAGGGGCAGTTGTGGTCATTACTGTGGACAGT---------ACTGGCAAGGTGGTCAGGGACTGGCTAGGTATCTTCAAGGGTCTG-------GCTTCACTCAGA---GT--GTGCATGTGGACATACAGGTGATT i mm10.chr2 C 0 I 7241 s canFam3.chr24 47544150 183 + 47698779 GTCTGAG--GCATGTATCCGAGGTCTTGGCACCC---------------------TTGGGGTGAGCGG-------GG-------GGAGGGCTGG-------CTCATCCTGACCTC----CTGCG-GCAGCCCTGGCCACT----CTGCGGGT---------GTGGGCGGCGCAGGGAGG---ACGC-AGGTGCCTGGGGTTC----GAGGGGGAGGGCAC---GGGGCATCTGTGTATGTAGACGTGCAGAGGGTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1789943 560 - 2029793 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=1037795.000000 s hg38.chr20_KI270870v1_alt 18034 101 + 183433 GGGCGGGAGTGTGTGTATGTCCTGTGACATCCTTCACCGGTGCCTGCAGTGGCAGAGCGCCCTGAGCCCCCATAGAGGGCCCAGGAGTGTCCGAGACCTGA s panTro5.chr20 66351092 101 + 66533130 GGGTGGGAGTGTGTGTATGTCCTGTGACACCCTTCACCGGTGCCTGCAGTGGCAGAGCGCCCTGAGCCCCCAAAGAGGGCCCAGGAGTGTCCAAGACCTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030188 101 + 62195757 GGGTGGGAGTGTGTGTATGTCCTGTGACACCCTTCACCGGTGCCTGCAGTGGCAGAGCGCCCTGAGCCCCCAAAGAGGGCCCAGGAGTGTCCAAGACCTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 419713 101 - 578057 GGGCGGGACTGTGTGTATGTCCTGTGACACCCTTCACCGGTGCCTGCAGTGGCAGAGCGCCCTGAGCCCCCAAAGAGGGCCCAGGAGTGTCCAAGACCTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109944900 101 - 110113093 GGGCGGGAGTGTGTGTATGTCCTGTGACACCCTTCACTGGTGCCTGCAGCAGCAGAGCGCCCTGAGCCCCCAAAGAGGGCCCAGGAGTGTCCGAGGCCTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92672891 101 - 92844088 GGGCGGGAGTGTGTGTATGTCCTGTGACACCCTTTGCTGGTGCCTGCAGCGGCAGAGCACCCCGGGCCCCCAAAGAGGGCCCAGGAATGTCCAAGACCTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335421 101 + 96509753 GGGCGGGAGTGTGTGTATGTCCTGTGACACCCTTCGCTGGTGCCTGCAGCGGCAGAGCACCCTGGGCCCCCAAAGAGGGCCCAGGAATGTCCAAGACCTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16806973 101 - 16982598 GGGCGGGAGTGTGTGTATGTCCTGTGACACCCTTCGCTGGTGCCTGCAGCGGCAGAGCACCCTGGGCCCCCAAAGAGGGCCCAGGAATGTCCAAGACCTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614048 101 - 3785965 GGGCGGGAGTGTGTGTATGTCCTGTGACACCCTTCGCTGGTGCCTGCAGCGGCAGAGCACCCTGGGCCCCCAAAGAGGGCCCAGGAATGTCCAAGACCTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90237680 101 - 90373283 GGGCGGGAGTGTGTGTATGTCCTGTGACACCCTTCGCTGCTGCCTGCAGCGGCAGAGCACCCTGGGCCCCCAAAGAGGGTCCAGGAATGTCCAAGACCTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 139607 101 + 156971 GGGCGGGAGTGTGTGTATGTCCTGTGACACCCTTCGCTGGTGCCTGTAGCGGCAGAGCACCCTGGGCCCCCAAAGAGGGCCCAGGAATGTCCAAGACCTGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488492 101 - 5823884 GGGCGGGAGTGTGTGTATGTCCTATGACACCCTTCGCTGGTGCCTGCAGCGGCAGAGCACCCTGGGCCCCCAAAGAGGGCCCAGGAATGTCCAAGACCTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138140 101 + 159171411 GGGCGGGAGTGTCTGTCTGTCCTGTGACACCCTTCACTGGTGCCTGCAGCGGCAGAGCTCCCTGAGCTCCCAAAGAGGGCCCAGGAATGTCAGAGACCTGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16203619 95 + 16356641 GGGTGGGAG----TGTCTGTCCTGTGACACCCTTCACTGGTGCCTGCAGCGGCAGAGCCCCCGGAGCTCCCAA--AGGGCCCAGGAGTGTCCGAGACCTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1064853 101 + 1231380 TGGTAGGAGTGTCTCTCTGTCCTGTGACACCCTTCACTGGTGCCTGCAGCGGCAGAGCCCCCAGAGCTCCCAAAGAGGGCCCAGGAATGTCCAAGACCTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603077 92 + 11732439 GGGCGGGAGTGTCTGTCTGTCCTGTGACACCCTTCACTGGTGCCTGCAGCGG---------CTGAGCTCCCAAAGAGGGCCCAGGAATGTCCGAGACCTGA i aotNan1.NW_018500483v1 C 0 I 362 s otoGar3.GL873542 22770440 79 + 22939663 GGGCAGGAATGTGTGTATGTCCTGTGAC--CTGGTGCTGGTGCCTGTAG-------------------CCCAGGATGGGCCTGGGAGCATC-GAGAGCTGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47544333 63 + 47698779 GGACATGGGGGTAT--------CGTGGTGCCC-CCACCTGTGCCCCCAGTGGC---------------CCCACAGAGGCACCCGGGG-------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1789943 560 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=151178.000000 s hg38.chr20_KI270870v1_alt 18135 24 + 183433 CGTGGAC------TATGTCTGGCTTTCTCG s panTro5.chr20 66351193 24 + 66533130 CGTGGAC------TATGTCTGGCTTTCTCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030289 24 + 62195757 CGTGGAC------TATGTCTGGCTTTCTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 419814 24 - 578057 CGTGGAC------TATGTCTGGCTTTCTCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945001 24 - 110113093 CGTGGAC------TACGTCTGGCTTCCTCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92672992 30 - 92844088 CGTGGAATGATCGTATGTCTGGCTTTCTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335522 30 + 96509753 CGTGGAATGATCGTATGTCTGGCTTTCTCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807074 30 - 16982598 CGTGGAATGATCGTATGTCTGGCTTTCTCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614149 30 - 3785965 CGTGGAATGATCGTATGTCGGGCTTTCTCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90237781 30 - 90373283 CGTGGAATGATCGTATGTCTGGCTTTCTCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 139708 30 + 156971 CGTGGAATGATCGTATGTCGGGCTTTCTCG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488593 30 - 5823884 CGCGGAATGATCATGTGTCTGGCTTTCTCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138241 28 + 159171411 -TGGGAATGACCATATGTATGGCTTTCT-G i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16203714 29 + 16356641 -TGGGAATGACCGTATGTCTGGCTTTCTCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1064954 29 + 1231380 -TGGGAATGACCGTATGTCTGGCTTTCTTG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22770519 22 + 22939663 TGCTGGCTGACTGTGATCCCAG-------- i otoGar3.GL873542 C 0 I 3 s canFam3.chr24 47544396 12 + 47698779 -----------------ACGGGCTATCCA- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1789943 560 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e aotNan1.NW_018500483v1 2603169 362 + 11732439 I a score=1423787.000000 s hg38.chr20_KI270870v1_alt 18159 174 + 183433 TCAGGCCGTGAATTCTTGCTGAAGGATCCTCAGATGGGAAAGGCTGATGCATGC-----CCAGATCTGG-AGGCTTTTGACTCGCCTGTTGGCTCCT-------------------------------GGCCTGGAGACAACCCTGTAGGCCGGCAGTCCGTGTCCCTCCACAGGAGGAC---CGTGC----CTACGTG-------G------------CTGGTTT---------CTG-------------------------------------------------------------------------------------------------GGCCTGGG s panTro5.chr20 66351217 222 + 66533130 TCAGGCCGTGAATTCTTGCTGAAGGATCCTCAGATGGGAAAGGCTGATGCATGC-----CCAGATCTGG-AGGCTTTTGACTCGCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGTAGGCCGGCAGTCCGTGTCCCTCCACAGGAGGAC---CGTGC----CCATGTG-------G------------CTGGTTT---------CTGAGTCCGTGTCCC------------------------------------------------GCCACAGGAGGACCGTGCCCAGGTGGCT-GTTTTCTGGGCCTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030313 222 + 62195757 TCAGGCCGTGAATTCTTGCTGAAGGATCCTCAGATGGGAAAGGCTGATGCATGC-----CCAGATCTGG-AGGCTTTTGACTCGCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGTAGGCCGGCAGTCCGTGTCCCTCCACAGGAGGAC---CGTGC----CCATGTG-------G------------CTGGTTT---------CTGAGTCCGTGTCCC------------------------------------------------GCCACAGGAGGACCGTGCCCACGTGGCT-GTTTTCTGGGCCTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 419838 270 - 578057 TCAGGCCGTGAATTCTTGCTGAAGGATCCTCAGATGGGAAAGGCTGATGCATGC-----CCAGATCTGG-AGGCTTTTGACTCGCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGCAGGCTGGCAGTCCGTGTCCCTCCACAGGAGGAG---CGTGC----CCACGTG-------G------------CTGGTTT---------CTGAGTCCGTGTCCCTCCACAGGAGGAGCGTGCCCACGTGGCTGGTTTCTGAGTCCGTGTCCTGCCACAGGAGGAGCGTGCCCACGTGGCT-GGTTTCTGGGCCTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945025 213 - 110113093 TCAGGCCGTGAATTCTTGCTGAAGGATCCTCAGATGGGAAAGGCTGATGCATGC-----CCAGATCTGG-AGGCTTTTGACTCCTCTGTTGGCTCCT-------------------------------GGCCTGGAGATGACCCTGCAGGCCAGCAGTCCATGTCCCTCCAC-GGGGGAC---CATGCCCCTCCACGGGGGACCATG------------CCCCTCC---------ACG-------------------------------------------------------------------GGGGACCATGCCCACATGGCT-GGTTTCTGGGCCTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673022 172 - 92844088 TCAGGCCATGAATTCTAGCTGAAGGATCCTCAGATGGGAAGGGCTGATGCAGGC-----CCAGATCTTG-AGGCTTTTGACTGTCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGCAGGCCGGCAGTCTGTGTCCCTCCAC-GGGGGAC---CACG-----CCATGTG-------G------------CTGGTTT---------CTG-------------------------------------------------------------------------------------------------GGCCTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335552 172 + 96509753 TCAGGCCATGAATTCTTGCTGAAGGATCCTCAGATGGGAAGGGCTGATGCAGGC-----CCAGATCTTG-AGGCTTTTGACTGTCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGCAGGCCGGCAGTCTGTGTCCCTCCAC-GGGGGAC---CACG-----CCATGTG-------G------------CTGGTTT---------CTG-------------------------------------------------------------------------------------------------GGCCTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807104 172 - 16982598 TCAGGCCATGAATTCTTGCTGAAGGATCCTCAGATGGGAAGGGCTGATGCAGGC-----CCAGATCTTG-AGGCTTTTGACTGTCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGCAGGCCGGCAGTCTGTGTCCCTCCAC-GGGGGAC---CACG-----CCATGTG-------G------------CTGGTTT---------CTG-------------------------------------------------------------------------------------------------GGCCTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614179 173 - 3785965 TCAGGCCATGAATTCTTGCTGAAGGATCCTCAGATGGGAAGGGCTGATGCAGGC-----CCAGATCTTG-AGGTTTTTGACTGTCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGCAGGCCGGCAGTCTGTGTCCCTCCACGGGGGGAC---CATG-----CCACGTG-------G------------CTGGTTT---------CTG-------------------------------------------------------------------------------------------------GGCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90237811 172 - 90373283 TCAGGCCATGAATTCTTGCTGAAGGATCCTCAGATGGGAAGGGCTGATGCAGGC-----CCAAATCTTG-AGGCTTTTGACTCTCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGCAGGCCGGCAGTCAGTGTCCCTCCAC-GGGCGAC---CACG-----CCACGCG-------G------------CTGGTTT---------CTG-------------------------------------------------------------------------------------------------GGCCTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 139738 173 + 156971 TCAGGCCATGAATTCTTGCTGAAGGATCCTCAGATGGGAAGGGCTGATGCAGGC-----CCAGATCTTG-AGGTTTTTGACTGTCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGCAGGCCGGCAGTCTGTGTCCCTCCACGGGGGGAC---CATG-----CCACGTG-------G------------CTGGTTT---------CTG-------------------------------------------------------------------------------------------------GGCCTGGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488623 172 - 5823884 TCAGGCCATGAATTCTTGCTGAAGGATCCTCAGATGGGAAGGGCTGATGCATGC-----CCAAATC-TG-AGGCTTTTGACTCTCCTGTTGGCTCCT-------------------------------GGCCTGGAGACGACCCTGCAGGCCGGCAGTCTGTGTCCCTCCAC-AGGGGAC---CATGC----CCACGTG-------G------------CTGGTTT---------CTG-------------------------------------------------------------------------------------------------GGCCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138269 206 + 159171411 TCAGGCCCTGAATTCTTGCTGAAGTATCCTTCAGTCGGAAAGGCTGATCCATGC-----CCAAATCTGG-AGGCTTTTGA-TGCACCGTTGGCTCCT-------------------------------GGCCTGGAGACGACACTGCAGGCTGGCAGTCCATGTCCCTCCAC-AGGGGCT---CATGC----CCACATG-------G------------CTGGTTTTGAGGTGGTCTT----------------------------------------------------------------------GAGGTTGTCATGGCAGCTGGGGGTAAGGGCCTG-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16203743 205 + 16356641 TCAGGCCTTGAATTCTTGCTGAAGGATCCTTTACTCAGAAAGGCAGATCCATGC-----CCAAATCTGG-AGGCTTTTGA-TGCCCTGTTGGCTCCT-------------------------------GGCCTGGA---GACCCTGCAGGCTGGCAGTCCGTGCCCCTCCAC-AGGGGCT---CATGC----CCACATG-------G------------CTGGTTTTGAGGTGGTCTT----------------------------------------------------------------------GAGGCTGTCATGGCAGCTGGGGGTAGGGGCTTGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1064983 205 + 1231380 TCAGGCCATGAATTCTTGCTGAAGTATTCTTCAGTCGGAAAGGCTGATCCATGC-----CCAAATCTGG-AGGCTTTTGA-TGCCCCGTTGGCTCCT-------------------------------GGCCTGGA---GAACCTGCAGGCTGGCAGTCTGTGCCCCTCCAC-AGGGGCT---CATGC----CCACATG-------G------------CTGGTTTTGAGGTGGTCTT----------------------------------------------------------------------GAGGTTGTCATGGCAGCTGGGGGTAGGAGCCTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603531 192 + 11732439 TCAGGCCGTGAATTCTTGCTGAAGGATCCTTCAGTCGGAAAGGCTGATCCATGC-----CCAAATCTGG-AGGCTTTTGA-TGCCCTGTTGGCTCCT-------------------------------GGCCTGGCGACGACCCTGCAGGCTGGCAGTCCGTGTCCCTCCAC-AGGGGCT---CATGC----CCACGTG-------G----------------------------CTT----------------------------------------------------------------------GAGGTTGTCATGGCAGCTGGGGGTAGGGGCCTGGG i aotNan1.NW_018500483v1 I 362 C 0 s otoGar3.GL873542 22770544 195 + 22939663 CCAGTCCGTGTACTCTTGCCAAGCGACCCCTGTAC-AGCAGGGCTGACTCATAC-----TTAAATCCTG-GGGCTTTAGAGTTTGTGGTTGGCTCCTGCAAATCACTGTTACTTAGACAAGAAAACTAGGCCTTGAGAGGA-CCTGCAGGCT----GTTCATCCTCCTCCAT---GGGGC---CACA-----CAGTTTG-------A------------CTGGCTT---------CTG-------------------------------------------------------------------------------------------------GGTCTGAG i otoGar3.GL873542 I 3 C 0 s canFam3.chr24 47544408 188 + 47698779 ----CCAGCAGGTGCGTGCCACAGG-TCAGTGGGCGGGCAAGGCTGAGTCACGCTCACGCCAGGTCCCGCAGAGCCATGG-TTCAGGGCAGGGGCAG-------------------------------GGCCAGGGGAGGGCTCCGGAGGTGGGCAGGGCCTGTCCCTCCAC-GCGGGACACACACAC----CCACACA-------GCTCGGCTTGGCTCTGGTCC---------CTG-------------------------------------------------------------------------------------------------GGGCCGGG i canFam3.chr24 C 0 I 444 e proCoq1.NW_012150197v1 1789943 560 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=860743.000000 s hg38.chr20_KI270870v1_alt 18333 89 + 183433 GAGTATGGGCTGCAGCTCTGGGATGCTCCAGGGGCTAGATTTGTTGACCTTGGACCGGGCTCTCCGTC-GTGGGCAGATGAGG-AGGGGTG s panTro5.chr20 66351439 89 + 66533130 GAGTATGGGCTGCAGCTCTGGGATGCTCCAGGGGCTAGATTTGTTGACCTTGGACTGGGCTCTCCGTC-GTGGGCAGATGAGG-AGGGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030535 89 + 62195757 GAGTATGGGCTGCAGCTCTGGGATGCTCCAGGGGCTAGATTTGTTGACCTTGGACTGGGCTCTCCGTC-GTGGGCAGATGAGG-AGGGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420108 89 - 578057 GAGTATGGGCTGCAGCTCTGGGATGCTCCAGGGGCTAGATTTGTTGACCTTGGACCGGGCTCTCCGTC-GTGGGCAGATGAGG-AGGGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945238 89 - 110113093 GAGTATGGGCCGCAGCTCTGGGATGCTCCAGGGGCTAGATGTGTTGACCTTGGACCAGGCTCTCCGTC-GTGGGCAGATGAGG-AGGGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673194 88 - 92844088 GAGTATGGGCTGCAGCTCCGGGATGCTCCACGGACTAGATTTGTTGACCTTGGACCAGACTGTCAGTC-GTGGGCAGATGAGG-AGG-GTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335724 88 + 96509753 GAGTATGGGCTGCAGCTCTGGGATGCTCCACGGACTAGATTTGTTGACCTTGGACCAGACTGTCAATC-GTGGGCAGATGAGG-AGG-GTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807276 88 - 16982598 GAGTATGGGCTGCAGCTCTGGGATGCTCCACGGACTAGATTTGTTGACCTTGGACCAGACTGTCAATC-GTGGGCAGATGAGG-AGG-GTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614352 88 - 3785965 GAGTATGGGTTGCAGCTCTGGGATGCTCCACGGACTAGATTTGTTGACCTTGGACCAGACTGTCAATC-GTGGGCAGATGAGG-AGG-GTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90237983 88 - 90373283 GAGTATGGGCTGCAGCTCTGGGATGCTCCACGGACTAGATTTGTTGACCTTGGACCAGACTGTCAGTT-GTGGGCAGATGAGG-AGG-GTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 139911 88 + 156971 GAGTATGGGCTGCAGCTCTGGGATGCTCCACGGACTAGATTTGTTGACCTTGGACCAGACTGTCAATC-GTGGGCAGATGAGG-AGG-GTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488795 89 - 5823884 GAGTATGGGCTGCAGCTCTGGGATGCTCCAGGGACTAGATTTGTTGACCTTGGACCAGACTGTCAATT-GTGGGCAGATGAGG-AGGCGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138475 85 + 159171411 ----GGGGGCTGCAGCTCTGGGATGCTCCAGGGGCCAGACCTGGTGACCTTGGACCAGGCTCTCCATT-GTGGGCATATGAGG-AGGGGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16203948 82 + 16356641 GAGTGGGGGCTGCAGCTCTGGGATGCT-------CCAGACCTGGTGACCTTGGACCAGGCTCTCCATT-GTGGGCAGATGAGG-AGGGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1065188 89 + 1231380 GAGTGGGGCCTGCAGCTCTGGGATGCTCCAGGGGCCAGACCTGGTGACCTTGGACCAGGCTCTCCATT-GTGGGCAGATGAGG-AGGGGCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603723 89 + 11732439 GAGCAGGGGCTGCAGCTCTGGGATGCTCCAGGGGCCAGACCTGGTGACCTGGGACCAGGCTCTCCACT-GTGGGCAGATGAGG-AGGGGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22770739 89 + 22939663 AAGTGCGAGCT-CAGCCCTGGGACACTACAGTAGCCAGAACTCTTGACCACAGGCCAGGCTCTCCCTCTGTGGGCATATGAGGCATGGGT- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1789943 560 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56786232 1197 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=338076.000000 s hg38.chr20_KI270870v1_alt 18422 25 + 183433 GGAAGGTTGGAGGAGAAAGGCTGGG s panTro5.chr20 66351528 25 + 66533130 GGAAGGTTGGAGGAGAAAGGCTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030624 25 + 62195757 GGAAGGTTGGAGGAGAAAGGCTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420197 25 - 578057 GGAAGGTTGGAGGAGAAAGGCTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945327 25 - 110113093 GGAAGGTTGGAGGAGAAAGGCTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673282 25 - 92844088 GGAAGGTTGGAGGAGAAAGGCTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335812 25 + 96509753 GGAAGGTTGGAGGAGAAAGGCTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807364 25 - 16982598 GGAAGGTTGGAGGAGAAAGGCTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614440 25 - 3785965 GGAAGGTTGGAGGAGAAAGGCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238071 25 - 90373283 GGAAGGTTGGAGGAGAAAGGCTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 139999 25 + 156971 GGAAGGTTGGAGGAGAAAGGCTGGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488884 25 - 5823884 AGAAGGTTGGAGGAGAAAGGCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138560 25 + 159171411 GGAAGGTTGGAGGAGAAAGGCTGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204030 25 + 16356641 GGAAGGTTGGAGGAGAAAGGCTGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1065277 17 + 1231380 GGAAGGTTGTAGGAGAA-------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603812 25 + 11732439 GGAAAGTCGGAGGAGAAAGGCCGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56787429 25 + 57149010 GGAAGGTTGGAGGAGAAAGGCCGGG i micMur3.chr18 I 1197 I 1 s proCoq1.NW_012150197v1 1790503 25 - 2029793 GGAAGGTTGGAGGAGAAAGGCTGGG i proCoq1.NW_012150197v1 I 560 I 42 s otoGar3.GL873542 22770828 23 + 22939663 GGAAGTTTGGGGAAAGGATGGTG-- i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 181591 572 - 397369 I a score=101664.000000 s hg38.chr20_KI270870v1_alt 18447 8 + 183433 TGAGGCAG s panTro5.chr20 66351553 8 + 66533130 TGAGGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030649 8 + 62195757 TGAGGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420222 8 - 578057 TGAGGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945352 8 - 110113093 TGAGGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673307 8 - 92844088 TGAGGCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335837 8 + 96509753 TGAGGCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807389 8 - 16982598 TGAGGCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614465 8 - 3785965 TGAGGCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238096 8 - 90373283 TGGGGCAG i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101369v1 140024 8 + 156971 TGAGGCAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488909 8 - 5823884 TGAGGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138585 8 + 159171411 TGAGGCAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204055 8 + 16356641 TGAGGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1065294 2 + 1231380 ------AG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603837 8 + 11732439 TGGGGCAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56787455 8 + 57149010 TGAGGCAG i micMur3.chr18 I 1 I 38 s otoGar3.GL873542 22770851 8 + 22939663 TGAGGCAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790528 42 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 181591 572 - 397369 I a score=224413.000000 s hg38.chr20_KI270870v1_alt 18455 39 + 183433 CCCC--CACCACCCTTTCTGG-ATCTCTCACCTTGGGGACAT s panTro5.chr20 66351561 39 + 66533130 CCCC--CACCGCCCTTTCTGG-ATCTCTCACCTTGGGGACAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030657 39 + 62195757 CCCC--CACCGCCCTTTCTGG-ATCTCTCACCTTGGGGACAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420230 39 - 578057 CCCC--CACCACCCTTTCTGG-ATCTCTCACCTTGGGGACAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945360 39 - 110113093 CCCC--CACCACCCTTTCTGG-ATCTCTCACCTTGGGGACAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673315 38 - 92844088 ACCC--C-CAACCCCTTCTGGAAAATCTCA-CTTGGGGACTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335845 39 + 96509753 ACCC--C-CAACCCCTTCTGGAAAATCTCACCTTGGGGACTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807397 39 - 16982598 ACCC--C-CAACCCCTTCTGGAAAATCTCACCTTGGGGACTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614473 39 - 3785965 ACCC--C-CAACCCCTTCTGGAAAATTTCACCTTGGGGACTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238105 39 - 90373283 CCCC--C-CAGCCCCTTCTGGAAAATTTCACCTTGGGGACTT i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101369v1 140032 39 + 156971 ATCC--C-CAACCCCTTCTGGAAAATTTCACCTTGGGGACTT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488917 41 - 5823884 CCCCCGC-CAACCCCTTCTGGAAAATTTCACCTTGGGGACTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138593 35 + 159171411 GCTC--C----TGCCTTCTGG-ATCCCACACCTTGGGGACTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204063 35 + 16356641 GCTC--C----CGCCTTCTGG-ATCCCTCACCTTGGGGACTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1065296 35 + 1231380 GCTC--C----CGCCTTCTGG-ATCCCTCACCTTGGGGACTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603845 35 + 11732439 GCTC--C----CGCCTTCCGG-ATCCCTCCCCCTGGGGACTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22770859 33 + 22939663 -------GTACTGTCTTCTGG-ATACCTCAACTTGGGGCTC- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790528 42 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787463 38 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=37097.000000 s hg38.chr20_KI270870v1_alt 18494 5 + 183433 CCAG-A s panTro5.chr20 66351600 5 + 66533130 CCAG-A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030696 5 + 62195757 CCAG-A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420269 5 - 578057 CCAG-A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945399 5 - 110113093 CCAG-A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673353 6 - 92844088 CCGGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335884 5 + 96509753 CCGG-A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807436 5 - 16982598 CCGG-A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614512 5 - 3785965 CCGG-A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238144 5 - 90373283 CCGG-A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140071 5 + 156971 CTGG-A i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488958 5 - 5823884 CCAG-A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138628 5 + 159171411 CCAT-A i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204098 5 + 16356641 CCAT-A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1065331 5 + 1231380 CCAT-A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603880 5 + 11732439 CCAT-A i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1790570 5 - 2029793 CCAG-G i proCoq1.NW_012150197v1 I 42 C 0 s otoGar3.GL873542 22770892 5 + 22939663 CTGG-G i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787463 38 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I a score=675689.000000 s hg38.chr20_KI270870v1_alt 18499 50 + 183433 CAGGAGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGGGC s panTro5.chr20 66351605 50 + 66533130 CAGGAGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030701 50 + 62195757 CAGGAGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420274 50 - 578057 CAGGAGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945404 50 - 110113093 CAGGAGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673359 50 - 92844088 CAGGGGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335889 50 + 96509753 CAGGGGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCAGAATGATGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807441 50 - 16982598 CAGGGGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614517 50 - 3785965 CAGGGGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCAGAATGATGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238149 50 - 90373283 CAGGGGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140076 50 + 156971 CACGGGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGGGC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5488963 50 - 5823884 CAGGGGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCGGAATGATGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138633 50 + 159171411 CAGGGGAGAACAGACCCAGGCTGGCAGCTAGTATAGTTGGAATGATGGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204103 49 + 16356641 C-GGGGGGAACAGACCCAGGCTGGCAGCTAGTATGGTTGGAAAGATGGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1065336 50 + 1231380 CAGGGGGCAACAGACCCAGGCTGGCAGCTAGTATGGTTGGAATGATGGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603885 34 + 11732439 C----------------GGGCTGGCAGCTAATATGGTTGGAAGGATGGGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56787501 50 + 57149010 CAGGGGAGAACAGGTCCAGGCTGGCAGCTGGCAGGGCCAGAATGATGGGC i micMur3.chr18 I 38 C 0 s proCoq1.NW_012150197v1 1790575 50 - 2029793 CAGGGGAGAACAGATCCGGGCTGGCAGCTGGCAGGGCCAGAAGGATGGGC i proCoq1.NW_012150197v1 C 0 I 1321 s otoGar3.GL873542 22770897 50 + 22939663 CAGGGGAGAACAGATCCAGGCTGGCAGCTGGTAGGGTCAGAATGATGGGC i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 181591 572 - 397369 I a score=344985.000000 s hg38.chr20_KI270870v1_alt 18549 30 + 183433 CCTGTTGGAGGTGAGGGAGCTTCTGACCTT s panTro5.chr20 66351655 30 + 66533130 CCTGTTGGAGGTGAGGGAGCTTCTGACCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030751 30 + 62195757 CCTGTTGGAGGTGAGGGAGCTTCTGACCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420324 30 - 578057 CCTGTTGGAGGTGAGGGAGCTTCTGACCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945454 30 - 110113093 CCTGTTGGAGGTGAGGGAGCTTCTGACCTT i nomLeu3.chr13 C 0 I 346 s rheMac8.chr10 92673409 30 - 92844088 CCCGTTGGAGGTGAGGGAGCTTCTGGCCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335939 30 + 96509753 CCCGTTGGAGGTGAGGGAGCTTCTGGCCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807491 30 - 16982598 CCCGTTGGAGGTGAGGGAGCTTCTGGCCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614567 30 - 3785965 CCCGTTGGAGGTGAGGGAGCTTCTGGCCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238199 30 - 90373283 CCCGTTGGAGGTGAGGGAGCTTCTGGCCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140126 30 + 156971 CCCGTTGGAGGCGAGGGAGCTTCTGGCCTT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489013 30 - 5823884 CCCATTGGAGGTGAGGGAGCTTCTGGCCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138683 30 + 159171411 CCCGTTGGGGGTGAGGTAGCTTCTGGCCTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204152 30 + 16356641 CCCGTTGGGGGTGAGGGAGCTTCTGGCCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1065386 30 + 1231380 CCCGTTGGGGGTGTGGGAGCTTCTGGCCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603919 30 + 11732439 CTCGTTGTGGGTGAGGGAGCTTCTCGCCTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56787551 30 + 57149010 TCTTTTAGTGGTCAGGGAGCTTCTGGCCTG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22770947 29 + 22939663 TCTTTTAG-GGAAAGTGACTTTCTGGCCTG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 181591 572 - 397369 I a score=539244.000000 s hg38.chr20_KI270870v1_alt 18579 47 + 183433 GCCCATTCTCTTCCCC--TTCTAACCTGCCTGGCACAAACCCCGACCTC s panTro5.chr20 66351685 47 + 66533130 GCCCATTCTCTTCCCC--TTCTAACCTGCCTGGCACAAACCCCGACCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030781 47 + 62195757 GCCCATTCTCTTCCCC--TTCTAACCTGCCTGGCACAAACCCCGACCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420354 47 - 578057 GCCCATTCTCTTCCCC--TTCTAACCTGCCTGGCACCAACCCCGACCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945830 47 - 110113093 gccCATTCTCTTCCCC--TTCTAACCTGCCTGGCACCAACCCCGACCTC i nomLeu3.chr13 I 346 C 0 s rheMac8.chr10 92673439 47 - 92844088 GCCCATTCTGTTCCCC--TTCTAACCTGCCTAGCACCAACCCTGGCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96335969 47 + 96509753 GCCCATTCTGTTCCCC--TTCTAACCTGCCTAGCACCAACCCTGGCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807521 47 - 16982598 GCCCATTCTGTTCCCC--TTCTAACCTGCCTAGCACCAACCCTGGCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614597 47 - 3785965 GCCCATTCTGTTCCCC--TTCTAACCTGCCTAGCACCAACCCTGGCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238229 47 - 90373283 GCCCATTCTGTTCCCC--TTCTAACCTGCCTAGCACCAACCCTGGCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140156 47 + 156971 GCCCATTCTGTTCCCC--TTCTAACCTGCCTAGCACCAACCCTGGCCTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489043 47 - 5823884 GCCCATTCTGTTCCCC--TTCTAACCTGCCTGGCACCAACCCTGACCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138713 47 + 159171411 GCCCATTCCCTTCCCC--TTCTAACCTGCCTGGAACCAATCCTGAGCTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204182 47 + 16356641 GCCCATTCCTTTCCCC--TTCTAACCTGCCTGGCACCAATCCTGAGCTC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1065416 47 + 1231380 GCCCATTCCCTTCCCC--TTCTAACCTGCCTGGCACCAATCCTGAGCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603949 47 + 11732439 ACCCATTCCCTTCCCC--TTCTAACCTGACTGGCACCAATCCTCAGCTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56787581 46 + 57149010 GCCCATTTCCTTCCCC--TTCT-ACCTGCCTGGCACCAACCCCGAGCTC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22770976 47 + 22939663 GCCCATTTCCTTCCCCATTCCT-TCTCGCCTGGCACCAGCCCTGA-TAC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 181591 572 - 397369 I a score=58148.000000 s hg38.chr20_KI270870v1_alt 18626 6 + 183433 AAAGGA s panTro5.chr20 66351732 6 + 66533130 AAAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030828 6 + 62195757 AAAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420401 6 - 578057 AAAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945877 6 - 110113093 AAAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673486 6 - 92844088 AAAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336016 6 + 96509753 AAAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807568 6 - 16982598 AAAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614644 6 - 3785965 AAAGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238276 6 - 90373283 AAAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140203 6 + 156971 AAAGGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489090 6 - 5823884 AAAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138760 6 + 159171411 ATAGGA i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065463 6 + 1231380 ATAGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2603996 6 + 11732439 GTAGGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56787627 6 + 57149010 AGAGGA i micMur3.chr18 C 0 I 378 s otoGar3.GL873542 22771023 6 + 22939663 ATAGAA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I a score=642535.000000 s hg38.chr20_KI270870v1_alt 18632 77 + 183433 TGGATAGTGGCCTGAGCCTGTGGCAGAAGCTTCAGCTACCCCCGGGGACTGGCTGATCCTCGTGCTGTGACTGCAGT s panTro5.chr20 66351738 77 + 66533130 TGGATAGTGGCCTGAGCCTGTGGCAGAAGTTTCAGCTACCCCCGGGGACTGGCTGATCCTCGTGCTGTGACTGCAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030834 77 + 62195757 TGGATAGTGGCCTGAGCCTGTGGCAGAAGTTTCAGCTACCCCCGGGGACTGGCTGATCCTCGTGCTGTGACTGCAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420407 77 - 578057 TGGATAGTGGCCTGAGCCTGTGGCAGAAGCTTCAGCTACCCCTGAGGACTGGCTGATCCTCGTGCTGTGACTGCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109945883 77 - 110113093 TGGATAATGGCCTGAGCCTGTGGCAGAAGCTTCAGCTACCCCTGAGGACTAGCTGATGCTAGTGCCGCGACTGCAGT i nomLeu3.chr13 C 0 M 221 s rheMac8.chr10 92673492 77 - 92844088 TGGATAGTGGCCTGAGCATGTGGCAGAAGCTTCAGTTCCCCCTGAGGACTGGCTGCTCCTAGTGCTGTGACCTCAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336022 77 + 96509753 TGGATAGTGGCCTGAGCATGTGGCAGAAGCTTCAGCTCCCCCTGAGGACTGGCTGCTCCTAGTGCTGTGACCTCAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807574 77 - 16982598 TGGATAGTGGCCTGAGCATGTGGCAGAAGCTTCAGCTCCCCCTGAGGACTGGCTGCTCCTAGTGCTGTGACCTCAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614650 77 - 3785965 TGGATAGTGGCCTGAGCATGTGGCAGAAGCTTCAGCTCCCCCTGAGGACTGGCTGCTCCTAGTGCTGTGACCTCAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238282 77 - 90373283 TGGATAGTGGCCTGAGTGTGTGGTAGAAGCTTCAGCTCCCCCTGAGGACTGGCTGCTGCTAGTGCTGTGACCTCAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140209 77 + 156971 TGGATAGTGGCCTGAGCATGTGGCAGAAGCTTCAGCTCCCCCTGAGGACTGGCTGCTCCTAGTGCTGTGACCTCAGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489096 77 - 5823884 TGGATAGTGGCCTGAGCCTGTGGCAGAAGCTTCAGCTCCCCCTGAGAACTGGCTGCTCCTAGTGCTGTGGCCTCAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138766 69 + 159171411 TGGATGGTGCCCTGAGCCTGTGGCAGAAGCTTCAGCTACCCCTGAGGACTGGCTGATTCCAATACTGTG-------- i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065469 77 + 1231380 TGGATGGTGCCCTGAGCCTGTGGCAGAAGCTTCAGCTATCCCTGAGGACTGGCTGATTCCAGTACTGTGACCGCTGT i cebCap1.NW_016107870v1 C 0 I 23 s aotNan1.NW_018500483v1 2604002 77 + 11732439 TGGATGGTGCCCTCAGCCTGTGGCAGAAGCTTCAGCTACCCCTGAGGACTGGCTGATTCCGGTACTGTGACCGCCGT i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22771029 52 + 22939663 GGGATGCTG-CCAGAATCTATTGCAGAAGCTTCAGCTATCCCTGAGGacacac------------------------ i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787633 378 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I a score=701258.000000 s hg38.chr20_KI270870v1_alt 18709 105 + 183433 acacacacacacacgcacat--------------acacacctgctcacagattccagcacaca-----cagaccttagc--acacacatacacacaagcacacagatgccagcacgtacacacCTG s panTro5.chr20 66351815 105 + 66533130 acacacacacacacgcacat--------------acacacctgctcacagattccagcacaca-----cagaccttagc--acacacatacacacaagcacacagatgccagcacgtacacacctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62030911 105 + 62195757 acacacacacacacgcacat--------------acacacctgctcacagattccagcacaca-----cagaccttagc--acacacatacacacaagcacacagatgccagcacgtacacacctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420484 105 - 578057 acacacacacacacgcacat--------------acacacctgctcacagattccagcacaca-----cggaccttagc--acacacgtacacacaagcacacagatgccagcacatacacacctg i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92673569 111 - 92844088 acacacacacacacacacacacatat--------acacacctgctcacagattccagcacaca-----aagaccttggt--gcacacgtacacacaagcacacagatgccagcacaaacacacctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336099 111 + 96509753 acacacacacacacacacacacacac--------acacacCTGCTCACAGATTCCAGCACACA-----AAGACCTTGGT--GCGCACGTACACACAAGCACACAGATGCCAGCACAAACACACCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807651 117 - 16982598 acacacacacacacacacacacacaca--caTATACACACCTGCTCACAGATTCCAGCACACA-----AAGACCTTGGT--GCACACGTACACACAAGCACACAGATGCCAGCACAAACACACCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614727 109 - 3785965 acacacacacacacacacacacac----------acacCCCTGCTCACAGATTCCAGCACACA-----AAGACCTTGGT--GCACACGTACACACAAGCACACAGATGCCAGCACAAACACACCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238359 119 - 90373283 acacacacacacacacacacacacacacGCATATACACACCTGCTCGAAGATTCCAGCACACA-----AAGACCTTGGT--GCACACGTACACACAGGCACACAGATGCCAGCGCAAACACACCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140286 115 + 156971 acacacacacacacacacacacaca----caTATACACACCTGCTCACAGATTCCAGCACACA-----AAGACCTTGGT--GCACACGTACACACAAGCACACAGATGCCAGCACAAACACACCTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489173 99 - 5823884 acacacacacacac--------------------acacacctgctcacagattccagcacaca-----aagaccttggt--gcacacgtacacacaagcacacagatgccagcacaaacacacctg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138835 92 + 159171411 ----------acacacacac--------------acacaccagctcacagattccagcacacg-------gaccttagc--atacatgtacacacaagtacacagat-cccgcacacacacacCTG i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065569 76 + 1231380 acacacacacacacacacac--------------acacacCTGCTCACAGATTCCAACACACA-------GACCTTAGC--------------------ACACGGAT-CCCG--------CACCTG i cebCap1.NW_016107870v1 I 23 C 0 s aotNan1.NW_018500483v1 2604080 89 + 11732439 ------------acacacac--------------acacacccactcacagattccagcacaca-------gaccttagc--atacacgtgcacacagc-acagagat-cccgcacatgcacacCTG i aotNan1.NW_018500483v1 I 1 I 107 s otoGar3.GL873542 22771081 112 + 22939663 acacacacacacacacacgc--------------acacacCTGTACACAGATTCCAGCACACATCACACTGACCTTGGCCTGCACATGTGCATACAAGCACATAGATTCTAGCACACATAAACAAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787633 378 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I e nomLeu3.chr13 109945960 221 - 110113093 M a score=65550.000000 s hg38.chr20_KI270870v1_alt 18814 10 + 183433 CCCTCCCACA-- s panTro5.chr20 66351920 10 + 66533130 ccctcccaca-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031016 10 + 62195757 ccctcccaca-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420589 10 - 578057 ccctcccaca-- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92673680 10 - 92844088 ccctcccaca-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336210 10 + 96509753 CCGTCCCACA-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807768 10 - 16982598 CCCTCCCACA-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614836 10 - 3785965 CCCTCCCACA-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238478 10 - 90373283 CCCTCCCACA-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140401 10 + 156971 CCCTCCCACA-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489272 10 - 5823884 ccctcccaca-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138927 9 + 159171411 -CCTCCCACA-- i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065645 9 + 1231380 -CCTCCCACA-- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22771193 10 + 22939663 --TGCACACAGA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787633 378 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I e aotNan1.NW_018500483v1 2604169 107 + 11732439 I e nomLeu3.chr13 109945960 221 - 110113093 M a score=136934.000000 s hg38.chr20_KI270870v1_alt 18824 18 + 183433 CATGGTCACACGCTTACA s panTro5.chr20 66351930 18 + 66533130 catggtcacacacttaca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031026 18 + 62195757 catggtcacacacttaca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420599 18 - 578057 catggtcacacacttaca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946181 18 - 110113093 CACGGTCACACACTTACA i nomLeu3.chr13 M 221 C 0 s rheMac8.chr10 92673690 18 - 92844088 catggtcacacacTTGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336220 18 + 96509753 CATGGTCACACACTTGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807778 18 - 16982598 CATGGTCACACACTTGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614846 18 - 3785965 CATGGTCACACACTTGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238488 18 - 90373283 CATGGTCACACACTTGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140411 18 + 156971 CATGGTCACACACTTGCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489282 18 - 5823884 catggtcacacacTTGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138936 18 + 159171411 CATGGCCACATGGTGGCA i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065654 18 + 1231380 CGTGGCCACACGCTCGCA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22771203 18 + 22939663 CACCAGCACATGCACACA i otoGar3.GL873542 C 0 I 1609 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787633 378 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I e aotNan1.NW_018500483v1 2604169 107 + 11732439 I a score=48914.000000 s hg38.chr20_KI270870v1_alt 18842 8 + 183433 CTCCATTG s panTro5.chr20 66351948 8 + 66533130 cTCCATTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031044 8 + 62195757 cTCCATTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420617 8 - 578057 cTCCATTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946199 7 - 110113093 CTCCACT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673708 8 - 92844088 CTCTATTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336238 8 + 96509753 CTCTATTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807796 8 - 16982598 CTCTATTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614864 8 - 3785965 CTCCATTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238506 8 - 90373283 CTCCATTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140429 8 + 156971 CTCCATTT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489300 8 - 5823884 CTCCATTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138954 8 + 159171411 CTTCGTTT i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065672 8 + 1231380 CTCCGTTT i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787633 378 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I e aotNan1.NW_018500483v1 2604169 107 + 11732439 I e otoGar3.GL873542 22771221 1609 + 22939663 I a score=167812.000000 s hg38.chr20_KI270870v1_alt 18850 23 + 183433 TTGCATGACCTTCTCCAGATCA------------G s panTro5.chr20 66351956 23 + 66533130 TTGCATGAACTTCCCCAGATCA------------G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031052 23 + 62195757 TTGCATGAACTTCCCCAGATCA------------G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420625 35 - 578057 TTGCATGAACTTCTCCATATCAGCTCTGGATTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946206 23 - 110113093 TTGCATGAGCTTCTCCAGATCA------------A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673716 35 - 92844088 TTGCATGAACTTCTCCAGATCAACTCTGGACCGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336246 35 + 96509753 TTGCATGAACTTCTCCAGATCAACTCTGGACCGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807804 35 - 16982598 TTGCATGAACTTCTCCAGATCAACTCTGGACCGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614872 35 - 3785965 TTGCATGAACTTCTCTAGATCAACTCTGGACGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238514 35 - 90373283 TTGCATGAACTTCTCCAGATCAACTCTGGACCGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140437 35 + 156971 TTGCATGAACTTCTCCAGATCAACTCTGGACCGTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489308 35 - 5823884 TTGCATGAACTTCTCCAGATCAACTCTGGACTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138962 23 + 159171411 TTGCATGACCGTGTCCAGATCAA------------ i calJac3.chr5 C 0 I 12 s cebCap1.NW_016107870v1 1065680 23 + 1231380 TTGCATGACCGTCTCCAGATCAA------------ i cebCap1.NW_016107870v1 C 0 I 49 s otoGar3.GL873542 22772830 23 + 22939663 TTGCATGAACATCTTCAGATTGA------------ i otoGar3.GL873542 I 1609 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787633 378 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I e aotNan1.NW_018500483v1 2604169 107 + 11732439 I a score=249795.000000 s hg38.chr20_KI270870v1_alt 18873 62 + 183433 ------------CACCTGCCATGTCCTGCCTGC--------------------------------CAGGTCGTCTT--------------------CAGG-CCAGGAGCCATTGCTTGTGGGT-----GGTG s panTro5.chr20 66351979 61 + 66533130 ------------CAC-TGCCATGTCCTGCCTGC--------------------------------CAGGTCGTCTC--------------------CAGG-CCAAGAGCCATTGCTTGTGGGT-----GGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031075 61 + 62195757 ------------CAC-TGCCATGTCCTGCCTGC--------------------------------CAGGTCGTCTC--------------------CAGG-CCAAGAGCCATTGCTTGTGGGT-----GGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420660 61 - 578057 ------------CAC-TGCCATGTTCTGCCTGC--------------------------------CAGGTCGTCTC--------------------CAGG-CCAGGAGCCATTGCTTGTGGGT-----GGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946229 65 - 110113093 ------------CTC-TGGATTGTGC--ACTGC--------------------------------CAGGTCGTCTA--------------------CAGGCCCAGGAGCCATTGCTTGTGGGTGGTGGGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673751 53 - 92844088 ------------CAC-TGCCATGTCCTGCCTGC--------------------------------CAGGTCATCTC--------------------CAGG-CCAGGAGCCATTGCTTGT------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336281 53 + 96509753 ------------CAC-TGCCATGTCCTGCCTGC--------------------------------CAGGTCATCTC--------------------CAGG-CCAGGAGCCATTGCTTGT------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807839 53 - 16982598 ------------CAC-TGCCATGTCCTGCCTGC--------------------------------CAGGTCATCTC--------------------CAGG-CCAGGAGCCATTGCTTGT------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614907 53 - 3785965 ------------CAC-TGCCATGTCCTGCCTGC--------------------------------CAGGTCATCTC--------------------CAGG-CCAGGAGCCATTGCTTGT------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238549 53 - 90373283 ------------CAC-TGCCATGTCCTGCCTGC--------------------------------CAGGTCATCTC--------------------CAGG-CCAGGAGCCATTGCTTGT------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140472 53 + 156971 ------------CAC-TGCCATGTCCTGCCTGC--------------------------------CAGGTCATCTC--------------------CAGG-CCAGGAGCCATTGCTTGT------------- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489343 53 - 5823884 ------------CAC-TGCCATGTCCTGCCTGC--------------------------------CAGGTCATCTC--------------------CAGG-CCAGGAGCCATTGCTTGT------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58138997 110 + 159171411 ------------TAC-TGCTCCGTCCTGCCCACGGCTGTGGCTTGTGGATGGGGTGGAGGGCTCTCAGATCAAATCTGGGTCATGCACTGCTCTGTCATG-CCAGCAGCTGTGGCTTGTGGGTC-------- i calJac3.chr5 I 12 C 0 s otoGar3.GL873542 22772853 52 + 22939663 TTCTGGACCATGCAC-TGACCTGTCCTGCTGGC--------------------------------CCCATCA------------------------CATG-TGAACAGTG---------------------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787633 378 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I e cebCap1.NW_016107870v1 1065703 49 + 1231380 I e aotNan1.NW_018500483v1 2604169 107 + 11732439 I a score=1155992.000000 s hg38.chr20_KI270870v1_alt 18935 148 + 183433 GGGTGGGGCTCTCTTGAGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGGCCCTGCTGGAGAGgggtcaggggtggggtggaatgttagagttaggggcagtggccgggtca------------gggtcagagtc s panTro5.chr20 66352040 148 + 66533130 GGGTGGGGCTCTCTTGAGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGGCCCTGCTGGAGAGGGGTCGGGGGTGGGGTGGAATgttagagttaggggcagtggccaggtca------------gggtcagagtc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031136 148 + 62195757 GGGTGGGGCTCTCTTGAGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGGCCCTGCTGGAGAGGGGTCGGGGGTGGGGTGGAATgttagagttaggggcagtggccaggtca------------gggtcagagtc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420721 148 - 578057 GGGTGGGGCTCTCTTGGGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGGCCCTGCTGGAGAGGGGTCGGGGGTGGGGTGGAATGTTAGAGTTAGGGGCAGTGGCCAGGTCA------------GGGGCAGAGTC i gorGor5.CYUI01015848v1 C 0 I 117 s nomLeu3.chr13 109946294 148 - 110113093 GGGTGGGGTTCTCTTGGGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCTGTGTGGGACCAGGCCCTGCTGGAGAGGGGTCGGGGGTGGGGTGGAATGTTAGAGTTAGGGGCAGTGGCCGGGTCA------------GGGGCAGAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673804 142 - 92844088 -GGTGGGGCTCTCTTGGGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGACCCTGCTGGAGAGGGGTCAG----GGGGTGGAATATTAGCATT-GGGGCAGTGGCCAGGGCA------------GGGGCAGAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336334 143 + 96509753 -GGTGGGGCTCTCTTGGGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGACCCTGCTGGAGAGGGGTCAG----GGGGTGGAATATTAGCATTAGGGGCAGTGGCCAGGGCA------------GGGGCAGAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16807892 143 - 16982598 -GGTGGGGCTCTCTTGGGCTGATTGCTGTGGGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGACCCTGCTGGAGAGGGGTCAG----GGGGTGGAATATTAGCATTAGGGGCAGTGGCCAGGGCA------------GGGGCAGAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3614960 143 - 3785965 -GGTGGGGCTCTCTTGGGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGACCCTGCTGGAGAGCGGTCAG----GGGGTGGAATATTAGCATTAGGGGCAGTGGCCAGGGCC------------GGGGCAGAGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238602 143 - 90373283 -GGTGGGGCTCTCTTGGGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAAGCTGGGTGGTGGTGTGGGACCAGACCCTGCTGGAGAGGGGTCAG----GGGGTGGAATATTAGCATTAGGGGCAGTGGCCAGGGCA------------GGGGCAGAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140525 155 + 156971 -GGTGGGGCTCTCTTGGGCTGATTGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGACCCTGCTGGAGAGGGGTCAG----GGGGTGGAATATTAGCATTaggggcagtggccagggcagtggccagggccgggacagagcc i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489396 142 - 5823884 -GGTGGGGCTCTCTTGGGCTGATGGCTGTGAGAC--GAACTGGGCTGGGGAAGGCTGGGTGGCGGTGTGGGACCAGACCCTGCTGGAGAGGGGTC-G----GGGGTGGAATATTAGCATTAGGGGCAGTGGCCAGGGCA------------GGGGCAGAGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139107 132 + 159171411 AGCAGGGGCTCTCTTGGGCTGGTTGATGAGAGACTAGAACTGGGCTGGGGAAGGCTGGGTAGCAGCGT----------------GGAGAGGGTTCAGGG--TGGGGCTCATGCTAGAGGTCGGGGCAGTGGCCAGGGCA------------AGGCCAGAGCC i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065752 118 + 1231380 GGGGGAGGCTCTCTTGGGCTGGTTGCTGAGAGAC--GAACTGGGCTGGGGAAGGCTGGGTAGCAGCGT---------------------GGGACCAGA---------CCCTGCTGGAGGTAGGGGCAGTGGCCAGGGCA------------AGGCCAGAGCC i cebCap1.NW_016107870v1 I 49 C 0 s aotNan1.NW_018500483v1 2604276 148 + 11732439 CGGGGGAGCTCTCTTGGGCTGGTTGCTGAGAGACTAGAACTGGGCTGGGGAAGGCTGGGTAGCAGTGTGGGACCAGACCCTGCTGGAGAGGGGTCAGGG--TGGGGCGCATGCTAGAGGTAGGGGCAGTGGCCAGGGCG------------AGGCCAGAGCC i aotNan1.NW_018500483v1 I 107 C 0 s otoGar3.GL873542 22772905 125 + 22939663 GAGTAAGGATCTCTTGGGCCCCTCATTGAGAGGCTGGGCCTTGGCTGGAGAAGGCTGGGCAGC--TGTGGGGCCA------GCTGGAGCGGGGC-----------------GCTGGAGTGGGAGGAGGTGGTTAGGACA------------GGTGCAGAGCC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787633 378 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I a score=399039.000000 s hg38.chr20_KI270870v1_alt 19083 72 + 183433 CCACAGCCACATGCTTGCTGCCCTGCATCC------------------------------------------------T------------------------------------------------------------------------------TGCAGCATTGGCGTCGGTGCACACGCATGTTTCATTCCCCG s panTro5.chr20 66352188 150 + 66533130 CCACGGCCACATGCTTGCTGCCCTGCATCC------------------------------------------------TCGTGGTGTCCACGGCCACATGCTTGCTGCCCTGCATCCTCGTGGCGTCCACGGCCACATGCTTGCTGCCCTGCATCCTTGCAGCATTGGCGTTGGTGCACACGCATGTTTCATTCCCCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031284 150 + 62195757 CCACGGCCACATTCTTGCTGCCCTGCATCCTCGTGGTGTCCACGGCCACATGCTTGCTGCCCTGCATCCTCGTGGCGTC------------------------------------------------CACGGCCACATGCTTGCTGCCCTGCATCCTTGCAGCATTGGCGTTGGTGCACACGCATGTTTCATTCCCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 420986 72 - 578057 CCACGGCCACATGCTTGCTGCCCTGCATCC------------------------------------------------T------------------------------------------------------------------------------TGCAGCATTGGCGTTGGTGCACACGCATGTTTCATTCCCCG i gorGor5.CYUI01015848v1 I 117 C 0 s nomLeu3.chr13 109946442 72 - 110113093 CCACGGCCACATGCTTGCTGCCCTGCATCC------------------------------------------------T------------------------------------------------------------------------------CGCGGCGTTGGCGTTGGTGCACACACACGTTTAATTCCCCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92673946 72 - 92844088 CCACGGCCACATGCTCGCTGCCCTGCATCC------------------------------------------------C------------------------------------------------------------------------------CGTGGCGCTGGCGTTGGTGCACACGCACGTTACACTCCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336477 72 + 96509753 CCACGGCCACATGCTCGCTGCCCTGCATCC------------------------------------------------T------------------------------------------------------------------------------CGTGGCGCTGGCGTTGGTGCACACGCACGTTACACTCCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808035 72 - 16982598 CCACGGCCACATGCTCGCTGCCCCGCATCC------------------------------------------------T------------------------------------------------------------------------------CGTGGCGCTGGCGTTGGTGCACACGCACGTTACACTCCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615103 72 - 3785965 CCACGGCCACATGCTCGCTGCCCTGCATCC------------------------------------------------T------------------------------------------------------------------------------CGTGGCGCTAGTGTTGGTGCACACGCCCGTTACACTCCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238745 69 - 90373283 CCACGGCCACATGCTCGCTGCCCTGCATCC------------------------------------------------T------------------------------------------------------------------------------CGTGGCGCTGG---TGGTGCACACGCACGTTACACTCCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140680 72 + 156971 CCACGGCCACATGCTCGCTGCCCTGCATCC------------------------------------------------T------------------------------------------------------------------------------CGTGGCGCTGGTGTTGGTGCACACGCACGTTACACTCCCTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489538 72 - 5823884 CCACGGCCACATGCTCGCTGCCCTGCACCC------------------------------------------------T------------------------------------------------------------------------------CGTGGCGCTGGTGTTGCTGCACACGCACGTTTCACTCCCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139239 53 + 159171411 CCATAGCCACACGCTCGCTGCCCTG-ATCT------------------------------------------------T------------------------------------------------------------------------------TGCGGCACCGGTG----CATACATGCA-------------- i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065870 67 + 1231380 CCATGGCCACATGCTTGCCGCCCTG-ATCC------------------------------------------------T------------------------------------------------------------------------------CACGGCGCCGGTG----CACACGTGCATGTTCCACTCCCCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2604424 67 + 11732439 CCGTGGCCACACGCTCGCCGCCCTG-ATCC------------------------------------------------T------------------------------------------------------------------------------GGCGGCGCCGGTG----CGCACGTGTGTGCTCCACTCCCCG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22773030 32 + 22939663 CCATAGTCACATGTTCGTTGTTTCATATGC------------------------------------------------A------------------------------------------------------------------------------T---------------------------------------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56787633 378 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I a score=422969.000000 s hg38.chr20_KI270870v1_alt 19155 54 + 183433 TGTTCATGGCATCCAGCCCCCATGTGTCATGTTCACATGCCCTGT-----------------------------------------------------------CTCATTTGC s panTro5.chr20 66352338 54 + 66533130 TGTTCATGGCATCCAGCCCCCATGTGTCATGTTCACATGCCCTGT-----------------------------------------------------------CTCATTTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031434 54 + 62195757 TGTTCATGGCATCCAGCCCCCATGTGTCATGTTCACATGCCCTGT-----------------------------------------------------------CTCATTTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421058 54 - 578057 TGTTCATGGCATCCAGCCCCCATGTGTCATGTTCACATGCCCTGT-----------------------------------------------------------CTCATTTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946514 54 - 110113093 TGTTCATGGCATCCAGCCCCCACGTGTCGTGTTCACACGCCCCGT-----------------------------------------------------------CTCATTCGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674018 54 - 92844088 TGTTCCTGGCACCCAGCGCCCACGTGTCATGTTCACACGCCCTGT-----------------------------------------------------------CTCATCCGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336549 54 + 96509753 TGTTCCTGGCACCCAGCGCCCACGTGTCATGTTCACACGCCCTGT-----------------------------------------------------------CTCATCCGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808107 54 - 16982598 TGTTCCTGGCATCCAGCGCCCACGTGTCATGTTCACACGCCCTGT-----------------------------------------------------------CTCATCCGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615175 54 - 3785965 TGTTCCTGGCATCCAGCGCCCACGTGTCATGTTCACACGCCCTGT-----------------------------------------------------------CTCATTCGC i cerAty1.NW_012001373v1 C 0 I 233 s chlSab2.chr2 90238814 54 - 90373283 TGTTCCTGGCATCCAGCGCCCACATGTCATGTTCACACGCCCTGT-----------------------------------------------------------CTCATTCGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140752 113 + 156971 TGTTCCTGGCATCCAGCGCCCACGTGTCATGTTCACACGCCCTGTCTCATTCGCTCGTGCAAAGCTCACATCATACCCCCACGTGTCATGTTCACACGCCCTGTCTCATTCGC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489610 54 - 5823884 TGTTCCTGGCATCCAGCCCCCACGTGTCACGTTCACACGCCCTGT-----------------------------------------------------------CTCATTCGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139292 52 + 159171411 TGTTCATAACAGCCAGCCCCCAC--GTCACTCGTACACATTCCGT-----------------------------------------------------------CTCATTCGC i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065937 54 + 1231380 TGTTCGTGGCAGCCAGCCCCCACGTGTCATGCGCACACACCCCGT-----------------------------------------------------------CTCGTGCGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2604491 54 + 11732439 TGTTCATGGCGGCCAGCCCCCACGTGTCACACGTACACACCCCGT-----------------------------------------------------------CTCGTTCGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56788011 54 + 57149010 TGTTCATGGCATCTCACCCACATGTGCCGTGTTCACATGCCCCGT-----------------------------------------------------------CCCATTCGC i micMur3.chr18 I 378 C 0 s otoGar3.GL873542 22773062 19 + 22939663 ------------CTCATCTGTA----------------------------------------------------------------------------------CCCATCTAC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I a score=152577.000000 s hg38.chr20_KI270870v1_alt 19209 16 + 183433 TCATGCAAGGCTAACA s panTro5.chr20 66352392 16 + 66533130 TCATGCAAGGCTAACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031488 16 + 62195757 TCATGCAAGGCTAACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421112 16 - 578057 TCATGCAAGGCTAACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946568 16 - 110113093 TCATGCAAGGCTAACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674072 16 - 92844088 TCGTGCAAAGCTCACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336603 16 + 96509753 TCGTGCAAAGCTCACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808161 16 - 16982598 CCGTGCAAAGCTCACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615462 16 - 3785965 TCGTGCAAAGCTCACA i cerAty1.NW_012001373v1 I 233 C 0 s chlSab2.chr2 90238868 16 - 90373283 TCGTGCAAAGCTCACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140865 16 + 156971 TCGTGCAAAGCTCACA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489664 16 - 5823884 TCGTGCAAAGCTCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139344 16 + 159171411 TCGTGCAAGGCTAACA i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1065991 16 + 1231380 TCAGGCAAGGCTAACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2604545 16 + 11732439 TCATGCAAGGCTGACA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56788065 16 + 57149010 TCATGCTAGGCTGACA i micMur3.chr18 C 0 I 618 s otoGar3.GL873542 22773081 16 + 22939663 TCACACTAGGCTGAGA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I a score=893963.000000 s hg38.chr20_KI270870v1_alt 19225 123 + 183433 TCGTTGTACCCACACACGTCTGCATGCATGACTCGATGCACTT----------TTGGGCCCCACTTCAGGCTT-CATGTGCTGGCTGCACACATTCCTGCTCACACG------TCCCGTGGACATGCCCTGAGTCTCTCT- s panTro5.chr20 66352408 123 + 66533130 TCGTTGTACCCGCACACGTCTGCATGCATGACTCGATGCACTT----------TTGGGCCCCACTTCAGGCTT-CATGTGCTGGCTGCACACATTCCTGCTCACACG------TCCCGTGGACATGCCCTGAGTCTCTCT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031504 123 + 62195757 TCGTTGTACCCGCACACGTCTGCATGCATGACTCGATGCACTT----------TTGGGCCCCACTTCAGGCTT-CATGTGCTGGCTGCACACATTCCTGCTCACACG------TCCCGTGGACATGCCCTGAGTCTCTCT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421128 123 - 578057 TCGTTGTACCCGCACACGTCTGCATGCATGACTCGATGCACTT----------TTGGGCCCCACTTCAGGCTT-CACGTGCTGGCTGCACACATTCCTGCTCACACA------TCCCGTGGACATGCCCTGAGTCTCTCT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946584 129 - 110113093 TTGTTGTACCCGCACACGTCTGCATGCGTGACTTGATGCACTT----------TTGGGCCCCACTTCAGGCTT-CACATGCTGGCTGCACACATTCCTGCTCACAGGATGTGCTCCCGTGGACGTGCCCTGAGTCTCTCT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674088 116 - 92844088 TC---ATGCCTGCATACGTCTGCACGCGTGACTCAACGCAC-T----------TTGGGCCCCACTTCAGGCTT-CA-GTGCTGGCTGCTCACATTCCTGCTCACACG------TCCCATGGACATG-CCTGAGTCTCTC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336619 117 + 96509753 TC---ATACCTGCACACGTCTGCACGCGTGACTCAACGCAC-T----------TTGGGCCCCACTTCAGGCTT-CA-GTGCTGGCTGCTCACATTCCTGCTCACACG------TCCCAGGGACACGCCCTGAGTCTCTC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808177 117 - 16982598 TC---ATACCTGCACACGTCTGCACGCGTGACTCAACGCAC-T----------TTTGGGCCCACTTCAGGCTT-CA-GTGCTGGTTGCACACATTCCTGCTCACACG------TCCCAGGGACATGCCCTGAGTCTCTC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615478 118 - 3785965 TC---ATACCTGCACACGTCCGCACGCGTGACTCAACACACTT----------TTGGGCCCCACTTCAGGCTT-CA-GTGCTGGCTGCACGCATTCCTGCTCACACG------TCCCATGGAGATGCCCTGAGTCTCTC-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90238884 118 - 90373283 TC---ATACCTGCACACGTCCGCACGCGTGACTCAACGCACTT----------TTGGGCCCCACTTCAGGCTT-CA-GTGCTGGCTGCACACATTCCTGCTCACACG------TCCCATGGACATGCCCTGAGTCTCTC-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140881 118 + 156971 TC---ATACCTGCACACGTCCGCACGCGTGACTCAACGCACTT----------TTGGGCCCCACTTCAGGCTT-CA-GTGCTGGCTGCACACATTCCTGCTCACACG------TCCCATGGAGATGCCCTGAGTCTCTC-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489680 118 - 5823884 TC---ATACCTGCACACGTCCACACGCATGACTCAATGCACTT----------TTGGGCCCCACTTCAGGCTT-CA-GTGTTGGCTGCACACATTCCTGCTCACACG------TCCCATGGACATGCCCTGAGTCTCTC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139360 121 + 159171411 TCGTGATACCTGCACACGTCCATGCCCATGACTCCATGCACTT----------TTGTGCCCTATTTGAGCCTT-CACAAGCTGGCTGCACACACTCCTGCTCACACA------T-CCGTGGATATGCCCTGAGGCTCTC-- i calJac3.chr5 C 0 I 3 s cebCap1.NW_016107870v1 1066007 121 + 1231380 TCGTGGTACCTGCACACGTCCGCACGCGTGACTCCATGCACAT----------TTGTGCCCTATTTGAGCCTT-CACAAGCTGGCTGCACACGCTCCTGCTCACAAG------T-CCATGGACATGCCCTGAGGCTCTC-- i cebCap1.NW_016107870v1 C 0 I 3 s aotNan1.NW_018500483v1 2604561 121 + 11732439 TCGTGGTACCTGCACACATCCATGCTCATGACTCCATGCACTT----------TTGTGCCCTATTTGAGCCTT-CACAAGCTGGTTGCACACGCTCCTGCTCACACA------T-CCGTGGACATGCCCTGAGGCtctc-- i aotNan1.NW_018500483v1 C 0 I 316 s otoGar3.GL873542 22773097 117 + 22939663 -TGTGGGGTCCGCACACATTTATACACATG----TATGCACTTGTCACTGCAGTTCCACCTGCCCCCAGGCCTGCACATGCTGGCTGTACACCT------------G------TCTTGCGGACATGCCCTGAGGCTCTC-T i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I a score=-14074.000000 s hg38.chr20_KI270870v1_alt 19348 2 + 183433 --GA s panTro5.chr20 66352531 2 + 66533130 --GA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031627 2 + 62195757 --GA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421251 2 - 578057 --GA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946713 2 - 110113093 --GA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674204 1 - 92844088 ---A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336736 1 + 96509753 ---A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808294 1 - 16982598 ---A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615596 1 - 3785965 ---A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239002 1 - 90373283 ---A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 140999 1 + 156971 ---A i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489798 1 - 5823884 ---A i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22773214 2 + 22939663 TC-- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I e cebCap1.NW_016107870v1 1066128 3 + 1231380 I e calJac3.chr5 58139481 3 + 159171411 I e aotNan1.NW_018500483v1 2604682 316 + 11732439 I a score=1289876.000000 s hg38.chr20_KI270870v1_alt 19350 156 + 183433 TAAGGTTCAGAGCCCAGGAGGGCACCTCTCACTC-GGGGGAGCCTGTTCCTGACCCTGTTCTCTGCTCGAGGAGCCTC--GGGAGGGTCACTGGGCAAGCATCTAGGAGGAGCCAGCAGCTGCAGGGCTGGAAGGGC------CATGGCCCACGCCTTTCTGTGG s panTro5.chr20 66352533 156 + 66533130 TAAGGTTCAGAGCCCAGGAGGGCACCTCTCACTC-GGGGGAGCCTGTTCCTGACCCTGTTCTCTGCTCGAGGAGCCTC--AGGAGGGTCACTGGGCAAGCATCTAGGAGGAGCCAGCAGCTGCAGGGCTGGAAGGGC------CACGGCCCACGCCTTTCTGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031629 156 + 62195757 TAAGGTTCAGAGCCCAGGAGGGCACCTCTCACTC-GGGGGAGCCTGTTCCTGACCCTGTTCTCTGCTCGAGGAGCCTC--AGGAGGGTCACTGGGCAAGCATCTAGGAGGAGCCAGCAGCTGCAGGGCTGGAAGGGC------CACGGCCCACGCCTTTCTGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421253 157 - 578057 TAAGGTTCAGAGCCTAGGAGGGCACCTCTCACTCGGGGGGAGCCTGTTCCTGACCCTGTTCTCTGCTCGAGGAGCCTC--GGGAGGGTCACTGGGCAAGCATCTAGGAGGAGCCAGCAGCTGCAGGGCTGGAAGGGC------CACGGCCCACGCCTTTCTGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946715 158 - 110113093 TAAGGTTCAGAGCCCAGAAGGGCACCTCTCACTC-GGGGGAGCCTGTTCCTGACCCTGTTCTCTGCTCGAGGAGCCTTGGGGGAGGGTCACTGGGTGAGCATCAAGGAGGAGCCAGCAGCTGCAGGGCTGGAAGGGC------CACAGCCCAAGCCTTTCTGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674205 154 - 92844088 TGAGGTTCAGAGCCCAG-GGGGCACCTCTCGCCT-GGGGAAG-CTGTTCCTGACCCTGCTCTCTGCTTGAGGAGCCTT--GGGAGGGTCACTGGGTGAGCATCGAGGAGGAGCCGACAGCTGCAGGGCTGGAAGGGC------CACTGCTCACGCCTTTCTGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336737 154 + 96509753 TGAGGTTCAGAGCCCAG-GGGGCACCTCTCGCCT-GGGGAAG-CTGTTCCTGACCCTGTTCTCTGCTTGAGGAGCCTT--GGGAGGGTCACTGGGTGAGCATCGAGGAGGAGCCGACAGCTGCAGGGCTGGAAGGGC------CACTGCTCACGCCTTTCTGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808295 154 - 16982598 TAAGGTTCAGAGCCCAG-GGGGCACCTCTCGCCT-GGGGAAG-CTGTTCCTGACCCTGTTCTCTGCTTGAGGAGCCTT--GGGAGGGTCACTGGGTGAGCATCAAGGAGGAGCCGACAGCTGCAGGGCTGGAAGGGC------CACTGCTCACGCCTTTCTGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615597 155 - 3785965 TAAGGTTCAGAGCCCAGAGGGGCACCTCTCGCTT-GGGGAAG-CTGTTCCTGACCCTGTTCTCTGCTTGAGGAGCCTT--GGGAGGGTCACTGGGTGAGCATCGAGGAGAAGCCGACAGCTGCAGGGCTGGAAGGGC------CACTGCTCACGCCTTTCTGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239003 156 - 90373283 TAAGGTTCAGAGCCCAGAGGGGCACCTCTCACTT-GGGGAAGCCTGTTCCTGACCCTGTTCTCTGCTTGAGGAGCCTT--GGGAGGGTCACTGGGTGAGCATCAAGGAGGAGCCCACAGCTGCAGGGCTGGAAGGGC------CACTGCTCACGCCTTTCTGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141000 155 + 156971 TAAGGTTCAGAGCCCAGAGGGGCACCTCTCGCTT-GGGGAAG-CTGTTCCTGACCCTGTTCTCTGCTTGAGGAGCCTT--GGGAGGGTCACTGGGTGAGCATCGAGGAGGAGCCGACAGCTGCAGGGCTGGAAGGGC------CACTGCTCACGCCTTTCTGTGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489799 155 - 5823884 TAAGGTTCAGAGCCCGG-AGGGCACCTCTCGCTT-GGGGAAGCCTGTTCCTGACCCTGTTCTCTGCTTGAGGAGCCTT--GGGAGGGTCACTGGGTGAGCATCAAGGAGGAGCCGACAGCTGCAGGGCTGGAAGGGC------CACTGCTCATGCCTTTCCGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139484 160 + 159171411 TAAGGTTCAGAGCCAGG--GGGCACCTCTCATTT-AAGAGAGCCTGTTCCTGATCCTGTCCGTTGCTTGAGGCGCCTT--GAGAGGGTCACTGGGTGAGCATCAGGGAGGAGCCAACAGCCACAGGGCTGGAAAGGCACCATCCACCACCCACCCCTTTCTGTGG i calJac3.chr5 I 3 C 0 s cebCap1.NW_016107870v1 1066131 160 + 1231380 TAAGGTTCAGAGCCAGG--GGGCACCTCTCACTT-GGGAGAGCCTGTTCCTGACCCTGTCCTTTGCTTGAGGCGCCTT--GGGAGGGTCACTGGGTGAGCATCAAGGAGAAGCCGACAGCCGCAGGGCTGGAAAGGCACCATCCACCACCCATGCCTTTCTGTGG i cebCap1.NW_016107870v1 I 3 C 0 s aotNan1.NW_018500483v1 2604998 160 + 11732439 TAAGGTTCAGAGCCGGG--GGCCACCTCTCACTT-GGGAGAGCCTGTTCCTGACCCTGTCCTTTGCTTGAGGCGCCTT--GGGAGCATCACTGGGTGAGCATCAAGGAGGAGCCGATAGCCGCAGGTCTGGAAAGGCACCATACACCACCCACGCCTTTCTGTGG i aotNan1.NW_018500483v1 I 316 C 0 s otoGar3.GL873542 22773216 104 + 22939663 CGAGGTACAGAGCCTGA-GAGGTGCCTCTCACTG-A---------------------------TGCTTGA---GCCTC--GGGAGGGGTGATGGGCAGGCAGC-AGGAGGAAATGGCATAT-CAGGGATGGTAGGGC--------------ACG----------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I e dasNov3.JH569290 181591 572 - 397369 I e saiBol1.JH378156 16204229 1 + 16356641 I a score=987896.000000 s hg38.chr20_KI270870v1_alt 19506 111 + 183433 CCAGTGAGCAGGGATCCTGCTGTGATGAAATCTCAGGCAGGCTGTGGCACG---GGGGATGCCGAAGGTGAATC--TGTGTAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- s panTro5.chr20 66352689 111 + 66533130 CCAGTGAGCAGGGATCCTGCTGTGATGAAATCTCAGGCAGGCTGTGGCACG---GGGGATGCCGAAGGTGAATC--TGTGTAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031785 111 + 62195757 CCAGTGAGCAGGGATCCTGCTGTGATGAAATCTCAGGCAGGCTGTGGCACG---GGGGATGCCGAAGGGGAATC--TGTGTAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421410 111 - 578057 CCAGTGAGCAGGGATCCTGCTGTGATGAAATCTCAGGCAGGCTGTGGCACG---GGGGATGCTGAAGGTGAATC--TGTGTAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946873 113 - 110113093 CTAGTGAGCAGGGATCCTGCTGTGATGGAATCTCAGGCAGGCTGCGGCATG---GGGGATGCCGAAGGTGAATC--TGTGTAGCTGTGAGGACCCTGAAGAAGAGCTTTGCCGGGGGC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674359 111 - 92844088 CCAGTGAGCAGGAATCCTGCTGTGGTGAAATCTCAGGCAGGCTGTGGTGTG---GAGGATGCCGAGGGTCAGTC--TGTGCAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96336891 111 + 96509753 CCAGTGAGCAGGAATCCTGCTGTGGTGAAATCTCAGGCAGGCTGTGGTATG---GAGGATGCCGAGGGTCAGTC--TGTGCAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808449 111 - 16982598 CCAGTGAGCAGGAATCCTGCTGTGGTGAAATCTCAGGCAGGCTGTGGTATG---GAGGATGCCGAGGGTCAATC--TGTGCAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615752 111 - 3785965 CCAGTGAGCAGGAATCCTGCTGTGGTGAAATCTCAGGCAGGCTGTGGTATG---GAGGATGCCGAGGGTCAATC--TGTGCAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239159 111 - 90373283 CCAGTGAGCAGGAATCCTGCTGTGGTGAAATCTCAGGCAGGCTGTGGTATG---GAGGATGCCGAGGGTCAATC--TGTGCAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--AGGC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141155 111 + 156971 CCAGTGAGCAGGAATCCTGCTGTGGTGAAATCTCAGGCAGGCTGTGGTATG---GAGGATGCCGAGGGTCAATC--TGTGCAGCTGTGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5489954 111 - 5823884 CCAGTGAGCAGGAATCCTGCTGTGGTGAAATCTCAGGCAGGCTGTGGTATG---GAGGATGCCGAGGGTCAATC--TGTGCAGCTGGGAGGACCCTGAAGAAGAGCTTTGCC--GGGC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139644 111 + 159171411 CCAGTGAGCAGGGATCCTGCTGTGGTGAAATCTCAGGTGTGCTGTGGTATG---GGGGATGCCACAGGTGAATC--TGTGCAACTGTGAGGACCCTGCAGAAGAGCTTTGCT--GGGC- i calJac3.chr5 C 0 I 1 s cebCap1.NW_016107870v1 1066291 109 + 1231380 CCAGTGAGCAGTGATCCCGCTGTGGTGAAATCTCAGGTGCGCTGTGGTATG---GGGGATGCCAAAGGTGAATC----TGCAGCTGTGGGGACCCTGCAGAAGAGCTTTGCT--GGGC- i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2605158 113 + 11732439 CCAGTGAGCAGGGATCCTGCTGTGGTGAAATCTCAGGTGCGCTGTGGTGTG---GGGGATGCCAAAGGTGAATCTCTGTGCAGCTGCGAGGACTCTGCAGAAGAGCTGTGCT--GGGC- i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 182163 115 - 397369 CTGGGGAGTGGGGGTCCTGCTGCGGTGAGAGCCTGGGTAGGGCGTGGCACAGGGTGGGGCACAGAGAGGGGACC--TGGGAGGGCGAGGGGTGCCGTGTGGCGGGTTGGGGG--AGGTT i dasNov3.JH569290 I 572 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I e saiBol1.JH378156 16204229 1 + 16356641 I e otoGar3.GL873542 22773320 0 + 22939663 C a score=4771.000000 s hg38.chr20_KI270870v1_alt 19617 3 + 183433 G-GG-- s panTro5.chr20 66352800 3 + 66533130 G-GG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031896 3 + 62195757 G-GG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421521 3 - 578057 G-GG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946986 3 - 110113093 G-GG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674470 4 - 92844088 GAGG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337002 4 + 96509753 GAGG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808560 4 - 16982598 GAGG-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615863 4 - 3785965 GAGG-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239270 4 - 90373283 GAGG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141266 4 + 156971 GAGG-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490065 4 - 5823884 GAGG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139756 2 + 159171411 --GG-- i calJac3.chr5 I 1 I 1 s saiBol1.JH378156 16204230 2 + 16356641 --GG-- i saiBol1.JH378156 I 1 I 1 s cebCap1.NW_016107870v1 1066401 2 + 1231380 --GG-- i cebCap1.NW_016107870v1 I 1 I 1 s aotNan1.NW_018500483v1 2605271 2 + 11732439 --GG-- i aotNan1.NW_018500483v1 C 0 I 253 s dasNov3.JH569290 182278 3 - 397369 ---GTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I e otoGar3.GL873542 22773320 0 + 22939663 C a score=36363.000000 s hg38.chr20_KI270870v1_alt 19620 5 + 183433 CAGCT s panTro5.chr20 66352803 5 + 66533130 CAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031899 5 + 62195757 CAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421524 5 - 578057 CAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946989 5 - 110113093 CAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674474 5 - 92844088 CAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337006 5 + 96509753 CAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808564 5 - 16982598 CAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615867 5 - 3785965 CAGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239274 5 - 90373283 CAGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141270 5 + 156971 CAGCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490069 5 - 5823884 CAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139759 5 + 159171411 TATCG i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16204233 5 + 16356641 TATCG i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1066404 5 + 1231380 TATCG i cebCap1.NW_016107870v1 I 1 C 0 s dasNov3.JH569290 182281 5 - 397369 CAGCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I e aotNan1.NW_018500483v1 2605273 253 + 11732439 I e otoGar3.GL873542 22773320 0 + 22939663 C a score=399648.000000 s hg38.chr20_KI270870v1_alt 19625 41 + 183433 -GGGGCAGTGCTGGGAGGTGGCA---CCTGGCTGGTGCATGTTGT- s panTro5.chr20 66352808 41 + 66533130 -GGGGCAGTGCTGGGAGGTGGCA---CCTGGCTGGCGCATGTTGT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031904 41 + 62195757 -GGGGCAGTGCTGGGAGGTGGCA---CCTGGCTGGCGCATGTTGT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421529 41 - 578057 -GGGGCAGTGCTGGGAGGTGGCA---CCTGGCTGGCTCATGTTGT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109946994 41 - 110113093 -GGGGCAGTGCTGGGAGGTGGCA---CCTGGCTGGCCTATGTTGT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674479 41 - 92844088 -GGGGCAGTGCTGGGAGGTGGCA---TCTGGCTGGTGCATGTTGT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337011 41 + 96509753 -GGGGCAGTGCTGGGAGGTGGCA---TCTGGCTGGTGCATGTTGT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808569 41 - 16982598 -GGGGCAGTGCTGGGAGGTGGCA---TCTGGCTGGTGCATGTTGT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615872 41 - 3785965 -GGGGCAGTGCTGGGAGGTGGCA---TCTGGCTGGTGCATGTTGT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239279 41 - 90373283 -GGGGCAGTGCTGGGAGGTGGCA---TCTGGCTGGTGCATGTTGT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141275 41 + 156971 -GGGGCAGTGCTGGGAGGTGGCA---TCTGGCTGGTGCATGTTGT- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490074 41 - 5823884 -GGGGCAGTGCTGGGAGGTGGTA---GCTGGCTGGCGCATGTTGT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139764 41 + 159171411 -GGGGCAGTGCTGGAATGTGGCA---TCTGGCCATTGCATGTTGT- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204238 40 + 16356641 -GAGGCAGTGCTGGGAGGTGGCA---TCTGGCCATTGCATATTG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066409 41 + 1231380 -GGGGCAGTGCTGGGAGGTGGCA---TCTAGCCATTGTATGTTTA- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605526 41 + 11732439 -GGGGCAGTGCTGGGAGGTGGCA---TCTGGCCGTTGCATGTTGT- i aotNan1.NW_018500483v1 I 253 C 0 s dasNov3.JH569290 182286 46 - 397369 TGGGGGTGACTGGGGAGGAGGCAGGGCCTGGCTCTGCAATGGTTCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I e otoGar3.GL873542 22773320 0 + 22939663 C a score=453674.000000 s hg38.chr20_KI270870v1_alt 19666 68 + 183433 ATCCTCTGTCTCCAAATCCCCGTTCTCTGCACAGAGCTAGACATTT---TGCTGCACCGGCGAGGACTGGA--- s panTro5.chr20 66352849 68 + 66533130 ATCCTCTGTCTCCAAATCCCCGTTCTCTGCACAGAGCTAGACATTT---TGCTGCACCGGCGAGGACTGGA--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62031945 71 + 62195757 ATCCTCTGTCTCCAAATCCCCGTTCTCTGCACAGAGCTAGACATTCCAGTGCTGCACCGGCGAGGACTGGA--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421570 68 - 578057 ATCCTCTGTCTCCGAATCCCTGTTCTCTGCACAGAGCTAGACATTT---TGCTGCACCGGCGAGGACTGGA--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947035 66 - 110113093 ATC--CTGTCTCCGAATCCCTGTTCTCTGCACAGAGCTAGACATTT---TGCTGCACCAGCGAGGACTGGA--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674520 66 - 92844088 ATC--CTGCCTCTGAATTCCCGTTCTCTGCAGAGAGCTAGACGTTT---TGCTGCACCAGCAAGGAGTGGA--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337052 65 + 96509753 ATC--CTGCCTCTGAATTCCCG-TCTCTGCAGAGAGCTAGACGTTT---TGCTGCACCAGCAAGGAGTGGA--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808610 66 - 16982598 ATC--CTGCCTCTGAATTCCCGTTCTCTGCAGAGAGCTAGACGTTT---TGCTGCACCAGCAAGGAGTGGA--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615913 66 - 3785965 ATC--CTGTCTCTGAATTCCCATTCTCTGCGCACAGCTAGACGTTT---TGCTGCACCAGCAAGGAGTGGA--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239320 66 - 90373283 ATC--CTGTCTCTGAATTCCTGTTCTCTGCAGAGAGCTAGACGTTT---TGCTGCACCAGCAAGGAGTGGA--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141316 66 + 156971 ATC--CTGTCTCTGAATTCCTGTTCTCTGCGCACAGCTAGACGTTT---TGCTGCACCAGCAAGGAGAGGA--- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490115 66 - 5823884 ATC--CTGTCTCTGAATTCCCGTTCTCTGCACAGAGCTAGACGTTT---TGCTGCACCAGCAAGGAGTGGA--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139805 68 + 159171411 ATCCTCCGTCTCTGAATCCCCATCCTCTGCACAGAGCTGGACATTT---TGATGCAGCAGGCAGGACTGCA--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204278 48 + 16356641 --------------------AATCCTCAGCACAGAGGTGGGCATTT---TGATGCAGCAGCCAGGACTGGA--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066450 68 + 1231380 ATCTTCTGTCTCTGAATCTGCATCCTCTGCACAGAGCTGGACATTT---TGATGCAGCAGCCAGGACTGGA--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605567 53 + 11732439 ATCCTCTGT---------------CTCTGCACAGAGCTGGACATTT---TGATGCAGCAGCCAGGACTGGA--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22773320 24 + 22939663 ATACACTGTCCA------CCTGCTCTCTGC-------------------------------------------- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 182332 54 - 397369 AGCTCCCCCTCCCCAGGTCCTGTCCCCGGGACAG---------------TGC-----CAGCACAGGCTGGAGGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1790625 1321 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I a score=327868.000000 s hg38.chr20_KI270870v1_alt 19734 29 + 183433 GTGGAGTCAC------------CCTCAGCTCTGGGGACCCC- s panTro5.chr20 66352917 29 + 66533130 GTGGAGTCAC------------CCTCAGCTCTGGGGACCCC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032016 29 + 62195757 GTGGAGTCAC------------CCTCAGCTCTGGGGACCCC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421638 29 - 578057 GTGGAGTCAC------------CCTCAGCTCTGGGGACCCC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947101 29 - 110113093 GTGGAGTCAC------------CCTCAGCTCTGGGGACCCT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674586 29 - 92844088 GTAGAGGCAC------------CCTCAGCTCTGGGGACCCC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337117 29 + 96509753 GTGGAGGCAC------------CCTCAGCTCTGGGGACCCC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808676 29 - 16982598 GTGGAGGCAC------------CCTCAGCTCTGGGGACCCC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3615979 29 - 3785965 GTGGAGGCAC------------CCTCAGCTCTGGGGACCCC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239386 29 - 90373283 GTGGAGGCAC------------CCTCAGCTCTGGGGACCCC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141382 29 + 156971 GTGGAGGCAC------------CCTCAGCTCTGGGGACCCC- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490181 29 - 5823884 GTGGAGGCAC------------CCTCAGCTCTGGGGACCCC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139873 29 + 159171411 GTGGAGACAC------------CCTCAGCTCTGGGGACCCT- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204326 29 + 16356641 GTGGAGACAC------------CCTCAGCTCTGGGGACCCT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066518 29 + 1231380 GTGGAGACAC------------CCTTAGCTCTGGGGACCCT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605620 29 + 11732439 GTGGAGACAC------------CCTCAGCTCTGGGGACCCT- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1791946 29 - 2029793 GTGGAGGCAC------------CCTCAGCCCTGGGGACCCC- i proCoq1.NW_012150197v1 I 1321 I 18 s otoGar3.GL873542 22773344 4 + 22939663 --------------------------AGTC------------ i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 182386 40 - 397369 GGGGTGTCTCCAGGATGGGACGCCTCAGCCCT--GGACCCCA i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I a score=107407.000000 s hg38.chr20_KI270870v1_alt 19763 18 + 183433 GCTATGGGCCAACTCCTC s panTro5.chr20 66352946 18 + 66533130 GCCATGGGCCAACTCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032045 18 + 62195757 GCTATGGGCCAACTCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421667 18 - 578057 GCTATGGGCCAACTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947130 18 - 110113093 GCTATGGGCCAACTCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674615 18 - 92844088 GCTATGGGCTGACTCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337146 18 + 96509753 GCTATAGGCTAACTCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808705 18 - 16982598 GCTATGGGCTGACTCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616008 18 - 3785965 GCTATGGGCTGACTCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239415 18 - 90373283 CCTATGGGCTGACTCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141411 18 + 156971 GCTATGGGCTGACTCCTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490210 18 - 5823884 GCTATGGGCTGACTCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139902 9 + 159171411 GCCATGGGC--------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204355 9 + 16356641 GCCATGGGC--------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066547 9 + 1231380 GCCATGGCC--------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605649 9 + 11732439 GCCATGGGC--------- i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 182426 18 - 397369 GCCGTGCCCCTGCCCCAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1791975 18 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I e otoGar3.GL873542 22773348 0 + 22939663 C a score=343007.000000 s hg38.chr20_KI270870v1_alt 19781 34 + 183433 -CCTGGACCTCCTGCTGATGGGCTGCCCTGGTTCC s panTro5.chr20 66352964 34 + 66533130 -CCTAGACCTCCTGCTGATGGGCTGCCCTGGTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032063 34 + 62195757 -CCTAGACCTCCTGCTGATGGGCTGCCCTGGTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421685 34 - 578057 -CCTGGACCTCCTGCTGATGGGCTGCCCTGGTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947148 34 - 110113093 -CCTGGACCTCCTGCTGATGGGCTGCCCTGGTTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674633 34 - 92844088 -CCTGGACCACCTGCTGATGGGCTGCCCTGGTTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337164 34 + 96509753 -CCTGGACCACCTGCTGATGGGCTGCCCTGGTTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808723 34 - 16982598 -CCTGGACCACCTGCTGATGGGCTGCCCTGGTTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616026 34 - 3785965 -CCTGGACCACCTGCTGATGGGCTGCCCTGGTTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239433 34 - 90373283 -CCTGGACCACCTGCTGATGGGCTGCCCTGGTTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141429 34 + 156971 -CCTGGACCACCTGCTGATGGGCTGCCCTGGTTCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490228 34 - 5823884 -CCTGGACCACCTGCTGATGGGCTGCCCTGGTTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139911 28 + 159171411 -------CCTCCTGCTGATTGGCTGGCCTGGTTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204364 28 + 16356641 -------CCTCCTGCTGATTGGCTGGCCTGGTTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066556 28 + 1231380 -------CCTCCTGCTGATTGGCTGGCCTGGTTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605658 28 + 11732439 -------CGTCCTGCTGATTGGCTGGCCTGGTTCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1791993 34 - 2029793 -CCTGGGCCTCCTGCTGGTGGGCTGCCCTGGCTCC i proCoq1.NW_012150197v1 I 18 I 161 s otoGar3.GL873542 22773348 28 + 22939663 -------CCTTTGTCCAGTGAGCTGCCCTGGGCCC i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 182444 35 - 397369 CCCTGGCCTTGGCCTCGACCGTGAGCCCCGTTCCC i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I a score=635010.000000 s hg38.chr20_KI270870v1_alt 19815 65 + 183433 TATCTCCACCCCTTTGCTCC-CA-GCACCTCTGCTGGTCCATGTA------ACCAATGTGCCC---TGCATGCCAG s panTro5.chr20 66352998 65 + 66533130 TATCTCCACCCCTTTGCTCC-CA-GCACCTCTGCTGGTCCATGTA------ACCAATGTGCCC---TGCATGCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032097 65 + 62195757 TATCTCCACCCCTTTGCTCC-CA-GCACCTCAGCTCGTCCATGTA------ACCAATGTGCCC---TGCATGCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421719 65 - 578057 TGTCTCCACCCCTTTGCTCC-CA-GCACCTCTGCTAGTCCATGTA------ACCAATGTGCCC---TGCATGCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947182 65 - 110113093 TGTCTCCACCCGTTTGCTCC-CA-GCACCTCTGCTCGTCCATGTA------ACCGATGTGCCC---TGCCTGCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674667 65 - 92844088 TATCTCCACTCCTTTGCTCC-CA-GCACCTCTGCTCGTCCATGTA------actgatgtgcct---tgcatgccag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337198 65 + 96509753 TATCTCCACTCCTTTGCTCC-CA-GCACCTCTGCTCGTCCATGTA------ACTGATGTGCCT---TGCATGCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808757 65 - 16982598 TATCTCCACTCCTTTGCTCC-CA-GCACCTCTGCTCGTCCATGTA------ACTGATGTGCCT---TGCATGCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616060 65 - 3785965 CATCTCCACCCCTTTGCTCC-CA-GCACCTCTGCTGGTCCATGTA------actgatgtgcct---tgcatgccag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239467 65 - 90373283 TACCTCCACCCCTTTGCTCC-CA-GCACCTCTGCTGGTCCATGTA------ACTGATGTGCCT---TGCATGCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141463 65 + 156971 CATCTCCACCCCTTTGCTCC-CA-GCACCTCTGCTGGTCCATGTA------actgatgtgcct---tgcatgccag i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490262 65 - 5823884 TATCTCCACCCCTTTGCTCC-CA-GCACCTCTGCTGGTCCATGTA------ACTGATGTGCCC---TGCATGCCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58139939 74 + 159171411 CATCTCCACTTCTTTGCTCC-CA-GCACCTCTGCTGGTAcatgtaacagacactgatgtgccccaatgcatgccag i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204392 74 + 16356641 CATCTCTACCTCTTTGCTCC-CA-GCACCTCTGCTGGtccatgtaacagacactgatgtgccccaacgcatgccag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066584 74 + 1231380 CATCTCCACCTCTTTGCTCC-CA-GCACCTCTGCTGGtccatgtaacagacactgatgtgccctgatgcatgccag i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605686 74 + 11732439 CATCCGCACCTCTTTGCTCC-CA-GAACCTCTGCTGGtccatgtaacagacactgatgtgccccaatgcatgccag i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22773376 73 + 22939663 CACCT-CATCCCTTTGCTCC-TATGCCCCTCTGTTTGTCTATGGAGCAGAAACTGGTGTCCCC-ACTGAGCTCCAT i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 182479 41 - 397369 ---CTCCCCCATCATGCCCCGCA-GCA------------------------GCC----TCCCA---TACAAGCCAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792027 161 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788081 618 + 57149010 I a score=715847.000000 s hg38.chr20_KI270870v1_alt 19880 61 + 183433 GCCCTGGGCTCAGTGCTGGGGGCTCAGACTGGGCTGGGACCTGGCAGGGGTTGGGGTGGTA s panTro5.chr20 66353063 61 + 66533130 GCCCTGGGCTCAGTGCTGGGGGCCCAGACTGGGCTGGGACCTGGCAGGGGTTGGGGTGGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032162 61 + 62195757 GCCCTGGGCTCAGTGCTGGGGGCCCAGACTGGGCTGGGACCTGGCAGGGGTTGGGGTGGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421784 61 - 578057 GCCCTGGGCTCAGTGCTGGGGGCCCAGACTGGGCTGGGACCTGGCAGGGGTTGGGGTGGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947247 61 - 110113093 GCCCTGGGCTCAGTGCTGGGGGCCCAGACTGGGCTGGCACCTGGCAGGGGTTGGGGTGGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674732 61 - 92844088 gccctgggctcagtgctgggggcccagACTGGGCTGGGACCTGGCAGGAGTTGGCGTAGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337263 61 + 96509753 GCCCTGGGCTCAGTGCTGGGGGCCCAGACTGGGCTGGGACCTGGCAGGGGTTGGCGTAGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808822 61 - 16982598 GCCCTGGGCTCAGTGCTGGGAGCCCAGACTGGGCTGGGACCTGGCAGGGGTTGGGGTAGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616125 61 - 3785965 gccctgggctcagtgctgggggcccagACTGGGCTGGGACCTGGCAGGGGTTGGGGTAGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239532 61 - 90373283 GCCCTGGGCTCAGTGCTGGGGGCCCAGACTGGGCTGGGACCTGGCAGGGGTTGGGGTAGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141528 61 + 156971 gccctgggctcagtgctgggggcccagACTGGGCTGAGACCTGGCAGGGGTTGGGGTAGCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490327 61 - 5823884 GCCCTGGGCTCAGTGCTGGGGGCCCAGACTGGGCTGGGACCTGGCAAGGGTTGGGGTGGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58140013 61 + 159171411 gccctgggctcagtgctgggggcccagACTGGGCTGGGACCTGGGAGGGGCTAGGGTGGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204466 43 + 16356641 gccctgggctcagt------------------gctgggACCTGGCAGGGGCTGGGGTGGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066658 43 + 1231380 gccctgggctcagt------------------gctgggACCTGGCAGGGGCTGGGGTGGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605760 61 + 11732439 gccctgggctcagtgctgggggcccagACTGGGCCGGGACCTGCCAGGGGCTGGGGTGACA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56788699 59 + 57149010 GCCCTGGGCTCAGTGCTGGGGGCCCAGACTGGGCTGGGACCTGG--GGGTTGGGGGTGGCA i micMur3.chr18 I 618 C 0 s otoGar3.GL873542 22773449 59 + 22939663 GAGGGGGTCTCAGCACTGAGAGCCTGGACTGGGCTGGAACATGG--GGTGTAGGGGTGGTG i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 182520 47 - 397369 ------------GTGCTGGGGTGCTGGGGTGG--CAGGGGCTGGCAGGGGCTGGGGTGGCA i dasNov3.JH569290 C 0 I 607 e proCoq1.NW_012150197v1 1792027 161 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I a score=182816.000000 s hg38.chr20_KI270870v1_alt 19941 13 + 183433 CCTCTGTCCAGGG s panTro5.chr20 66353124 13 + 66533130 CCTCTGTCCAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032223 13 + 62195757 CCTCTGTCCAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421845 13 - 578057 CCTCTGTCCAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947308 13 - 110113093 CCTCTGTCCAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674793 13 - 92844088 CCTCTGTCCAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337324 13 + 96509753 CCTCTGTCCAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808883 13 - 16982598 CCTCTGTCCAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616186 13 - 3785965 CCTCTGTCCGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239593 13 - 90373283 CCTCTGTCCAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141589 13 + 156971 CCTCTGTCCAGGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490388 13 - 5823884 CCTCTGTCTAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58140074 13 + 159171411 CCTCTGTCCAGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204509 13 + 16356641 CCTCTGTCCAGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066701 13 + 1231380 CCTCTGTCCAGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605821 13 + 11732439 CCTCTGTCCAGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56788758 13 + 57149010 CCTCTGTCCGGGG i micMur3.chr18 C 0 I 75 s otoGar3.GL873542 22773508 13 + 22939663 CTTCTGTCCAGGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792027 161 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I a score=531536.000000 s hg38.chr20_KI270870v1_alt 19954 56 + 183433 CTTGTGGATGGGACTCTTTTGC-TACTGCCTTGGCAGCAGCCAGGA-GGGGGCCCAGC s panTro5.chr20 66353137 56 + 66533130 CTTGTGGATGGGACTCTTTTGC-TACTGCCTTGGCAGCAGCCAGGA-GGGGGCCCAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032236 56 + 62195757 CTTGTGGATGGGACTCTTTTGC-TACTGCCTTGGCAGCAGCCAGGA-GGGGGCCCAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421858 56 - 578057 CTTGTGGATGGGACTCTTTTGC-TACTGCCTTGGCAGCAGCCAGGA-GGGGGCCCAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947321 57 - 110113093 CTTGTGGATGAGATCCTTTTGC-TACTGCCCTGGCAGCAGCCAGGAGGGGGGCCCAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674806 58 - 92844088 CTTATGGATGGCACCCTTTTGCTTACTGCCCTGGCAGCAGCCAGGAGGGGGGACCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337337 58 + 96509753 CTTATGGATGGCACCCTTTTGCTTACTGCCCTGGCAGCAGCCAGGAGGGGGGACCAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808896 58 - 16982598 CTTATGGATGGCACCCTTTTGCTTACTGCCCTGGCAGCAGCCAGGAGGGGGGACCAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616199 58 - 3785965 CTTATGGATGGCACCCTTTTGCTTACTGCCCTGGCAGCAGCCAGGAGGGGGGACCAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239606 58 - 90373283 CTTATGGATGGCACCCTTTTGCTTACTGCCCTGGCAGCAGCCAGGAGGGGGGACCAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141602 58 + 156971 CTTATGGATGGCACCCTTTTGCTTACTGCCCTGGCAGCAGCCAGGAGGGGGGACCAGC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490401 58 - 5823884 CTTATGGATGGCACCCTTTTGCTTACTGCCCTGGCAGCAGCCAGGAGGGGGGCCCAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58140087 56 + 159171411 CTTATGGATGGGACCCTCTTGC-TACTACCCTGGCAGCAGCCGGGG-GGGTGCCCAGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204522 55 + 16356641 CTTGTGGATGGGACCCTCTTGC-CCCTACCCTGGGAGCAGCTGGGA-GGG-GCCCAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066714 56 + 1231380 CTTGTGAATGGGACCCTCATGC-TACTACCCTGGCAGCAGCCGGGA-AGGGGCCCAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605834 56 + 11732439 CTTGTGGATGGGACCCTCTTGC-TACTACCCTGGCAGCAGCCGGGA-GGGGGCCCAGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22773521 51 + 22939663 -TTGCAGGAGGGACTTTCTTGC-TACTACCCTGGCAGTGATCAGGA-GGG----CAGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792027 161 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788771 75 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I a score=112159.000000 s hg38.chr20_KI270870v1_alt 20010 8 + 183433 TGAGGACT s panTro5.chr20 66353193 8 + 66533130 TGAGGACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032292 8 + 62195757 TGAGGACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421914 8 - 578057 TGAGGACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947378 8 - 110113093 CGAGGACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674864 8 - 92844088 CGAGGACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337395 8 + 96509753 CAAGGACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808954 8 - 16982598 CGAGGACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616257 8 - 3785965 CGAGGACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239664 8 - 90373283 CGAGGACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141660 8 + 156971 CGAGGACT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490459 8 - 5823884 CGAGGACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58140143 8 + 159171411 CGAGGACT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16204577 8 + 16356641 CGAGGACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066770 8 + 1231380 TGAGGACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605890 8 + 11732439 CGAGGACT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56788846 8 + 57149010 TGAGGACG i micMur3.chr18 I 75 C 0 s proCoq1.NW_012150197v1 1792188 8 - 2029793 TGAGGACT i proCoq1.NW_012150197v1 I 161 C 0 s otoGar3.GL873542 22773572 8 + 22939663 TGAGGGCT i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I a score=250335.000000 s hg38.chr20_KI270870v1_alt 20018 19 + 183433 GCAGCTCTACCCAGTCCAG s panTro5.chr20 66353201 19 + 66533130 GCAGCTCTACCCAGTCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032300 19 + 62195757 GCAGCTCTACCCAGTCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421922 19 - 578057 GCAGCTCTACCCAGTCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947386 19 - 110113093 GCAGCTCTACCCAGTCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674872 19 - 92844088 GCAGCTCTACCCAGTCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337403 19 + 96509753 GCAGCTCTACCCAGTCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808962 19 - 16982598 GCAGCTCTACCCAGTCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616265 19 - 3785965 GCAGCTCTACCCAGTCCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239672 19 - 90373283 GCAGCTCTACGCAGTCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141668 19 + 156971 GCAGCTCTACCCAGTCCAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490467 19 - 5823884 GCAGCTCTACCCAGTCCAG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204585 19 + 16356641 GCAGCTCTCCCTGGTCCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066778 19 + 1231380 GCAGCTCTCCCCGGTCCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605898 19 + 11732439 GCAACTCTCCCCGGTCCAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56788854 19 + 57149010 GCAGCTCTACCCAGCCCAG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1792196 19 - 2029793 GCAGCTCTACCCAGTCCGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22773580 19 + 22939663 GCAGATCTACCCAGTCCAG i otoGar3.GL873542 C 0 I 3 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I e calJac3.chr5 58140151 0 + 159171411 C a score=36256.000000 s hg38.chr20_KI270870v1_alt 20037 3 + 183433 AAC s panTro5.chr20 66353220 3 + 66533130 AAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032319 3 + 62195757 AAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421941 3 - 578057 AAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947405 3 - 110113093 AAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674891 3 - 92844088 AAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337422 3 + 96509753 AAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808981 3 - 16982598 AAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616284 3 - 3785965 AAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239691 3 - 90373283 AAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141687 3 + 156971 AAC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490486 3 - 5823884 AAC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204604 3 + 16356641 AAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066797 3 + 1231380 AAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605917 3 + 11732439 AAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56788873 3 + 57149010 AAC i micMur3.chr18 C 0 I 119 s proCoq1.NW_012150197v1 1792215 3 - 2029793 AAC i proCoq1.NW_012150197v1 C 0 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=91180.000000 s hg38.chr20_KI270870v1_alt 20040 9 + 183433 GTTTGACCA s panTro5.chr20 66353223 9 + 66533130 GTTTGACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032322 9 + 62195757 GTTTGACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421944 9 - 578057 GTTTGACCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947408 9 - 110113093 GTTTGACCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674894 9 - 92844088 GTTTGGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337425 9 + 96509753 GTTTGGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808984 9 - 16982598 GTTTGGCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616287 9 - 3785965 GTTTGGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239694 9 - 90373283 GTTTGGCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141690 9 + 156971 GTTTGGCCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490489 9 - 5823884 GTTTGGCCA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204607 9 + 16356641 GTTTGGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066800 9 + 1231380 GTTTGGCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605920 9 + 11732439 GTTTGGCCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1792218 9 - 2029793 CTTTGGCCA i proCoq1.NW_012150197v1 C 0 I 115 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788876 119 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=880868.000000 s hg38.chr20_KI270870v1_alt 20049 117 + 183433 TGCAGGGGGATAGGCTCCACTTCCAGAGTCTGTGATGGT-TTTTTTTTT--GTCAGAGGAACTGAGCTAGAAAGAGCTGTGAATGATGGTTCAGCTCTGAGAAGCAGATAAACCTTTATA s panTro5.chr20 66353232 117 + 66533130 TGCAGGGGGATAGGCTCCACTTCCAGAGTCTGTGATGGG-TTTTTTTTT--GTCAGAGGAACTGAGCTAGAAAGAGCTGTGAATGATGGTTCAGCTCTGAGAAGCAGATAAACCTTTATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032331 117 + 62195757 TGCAGGGGGATAGGCTCCACTTCCAGAGTCTGTGATGGG-TTTTTTTTT--GTCAGAGGAACTGAGCTAGAAAGAGCTGTGAATGATGGTTCAGCTCTGAGAAGCAGATAAACCTTTATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 421953 118 - 578057 GGCAGGGGGATAGGCTCCACTTCCAGAGTCTGTGATGGGTTTTTTTTTT--GTCAGAGGAACTGAGCTAGAAAGAGCTGTGAATGACGGTTCAGCTCTGAGAAGCAGATAAACCTTTATA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947417 116 - 110113093 GGCAGGGGGATGGGCTGCACTTCCAGAGTCTGTGGTGGG--GTTTTTTT--GTCAGAGGAACTGAGCTAGAAAGAGATGTGAATGATGGTTCAGCTCTGAGAAGCAGATAAACCTTTATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92674903 112 - 92844088 GGCAGGAGGATGGGCTGTACTTCCAGAGTC--TGGTGGG----TTTTTT--GTCAGAGGAACTGAGCTAGAAAGACATGTGAATGATGGTTCAGCTCTGAGAAGCAAATAAGCCTTTATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337434 112 + 96509753 GGCAGGAGGATGGGCTGTACTTCCAGAGTC--TGGTGGG----TTTTTT--GTCAGAGGAACTGAGCTAGAAAGACATGTGAATGATGGTTCAGCTCTGAGAAGCAAATAAGCCTTTATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16808993 105 - 16982598 GGCAGGAGGATGGGCTGTACTTCCAGAGTC--TGGTGGG----TTTTTT--GTCAGAGGAACTGAGCTGCA-------GTGAATGATGGTTCAGCTCTGAGAAGCAAATAAGCCTTTATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616296 112 - 3785965 GGCAGGAGGATGGGCTGTACTTCCAGAGTC--TGGTGGG----TTTTTT--GTCAGAGGAACTGAACTAGAAAGACATGTGAATGACGGTTCAGCTCTGAGAAGCAAATAAGCCTTTATA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239703 112 - 90373283 GGCAGGAGGATGGGCTGCACTTCCAGAGTC--TGGTGGG----TTTTTT--GTCAGAGGAACTGAGCTAGAAAGACATGTGAACGATGGTTCAGCTCTGAGAAGCAAATAAGCCTTTATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141699 112 + 156971 GGCAGGAGGATGGGCTGTACTTCCAGAGTC--TGGTGGG----TTTTTT--GTCAGAGGAACTGAGCTAGAAAGACATGTGAATGACGGTTCAGCTCTGAGAAGCAAATAAGCCTTTATA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490498 112 - 5823884 GGCAGGAGGATGGGCTGTACTTCCAGAGTC--TGGTGGG----TTTTTT--GTCAGAGGAACTGAGCTAGAAAGACATGTGAATGATGGTTCAGCTCTGAGACGCAAATAAACCTTTATA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204616 117 + 16356641 GGCAGGGAGAGGGGCTCTACTTGCAAAGTCTGTGGTGGG---GGTTTTTTAATCAGAGGAACCGAGCTGGAAGGAGATGTGAATGGTGGTTCAGCTCTGGGAAGCAAATAAACCTTTGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066809 115 + 1231380 GGCAGGGAGAGGGGCTCCACTTGCAAAGTCTGTGGTGGG---GGTTTTT--GTCAGAGGAACTGAGCTGGAAGGAGATATGAATGATGGCTCTGCTCTGAGAAGCAAATAAACCTTTGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2605929 115 + 11732439 GGCAGGGGGAGGGGCTCTACTTGCAAAGTCTGTGGTGGG---GGTTTTT--GTCAGAGGAACTGAGCTGGAAAGAGATGTGAATGCCGGTTCAGCTCTGAGAAGCAAATAAACCTCTGTA i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792227 115 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788876 119 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=10920.000000 s hg38.chr20_KI270870v1_alt 20166 1 + 183433 A s panTro5.chr20 66353349 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032448 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422071 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947533 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675015 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337546 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809098 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616408 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239815 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141811 1 + 156971 A i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490610 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204733 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066924 1 + 1231380 A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2606044 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1792342 1 - 2029793 A i proCoq1.NW_012150197v1 I 115 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56788876 119 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=1475269.000000 s hg38.chr20_KI270870v1_alt 20167 132 + 183433 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCTGTTTGTCACATGCCCTTCAGGACACACACATCTGTCTCTCCTGCATAGCCCTCCATGGAGTCCTGGGCCAGGTTCCGGGTCCACCCTGTCCCC s panTro5.chr20 66353350 132 + 66533130 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCTGTTTGTCACATGCCCTTCAGGACACACACATCTGTCTCTCCTGCATAGCCCTCCATGGAGTCCTGGGCCAGGTTCCGGGTCCACCCTGTCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032449 132 + 62195757 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCTGTTTGTCACACGCCCTTCAGGACACACACATCTGTCTCTCCTGCATAGCCCTCCATGGAGTCCTGGGCCAGGTTCCGGGTCCACCCTGTCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422072 132 - 578057 GTCATAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCTGTTTGTCACATGCCCTGCAGGACACACACATCTGTCTCTCCTGCATAGCCCTCCATGGAGTCCTGGGCCAGGTTCCGGGTCCACCCTGTCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947534 132 - 110113093 GTCAGAAGAGGCCTCAATTTCTCCATTTGTCCTGGCCCTGTTTGTCACATGCCCTGCAGGACACacatatctgtctctcctgcatagccctccatggagtcctgggccaggttctgggtccaccctgtcccc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675016 132 - 92844088 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCCGTTTGTCACATGCCCTGCAGGACACACACATCTGTCTTTCCTGCATGGTCCTCCATGGAGTCCTGGGCCAGGTTCTGAGTCTACCCTGTCCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337547 132 + 96509753 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCCGTTTGTCACATGCCCTGCAGGACACACACATCTGTCTTTCCTGCATGGTCCTCCATGGAGTCCTGGGCCAGGTTCTGAGTCTACCCTGTCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809099 132 - 16982598 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCCGTTTGTCACATGCCCTGCAGGACACACACATCTGTCTTTCCTGCATGGTCCTCCATGGAGTCCTGGGCCAGGTTCTGAGTCTACCCTGTCCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616409 132 - 3785965 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCCGTCTGTCACATGCCCTGCAGGACACACACATCTGTCTTTCCTGCATGGTCCTCCACGGAGTCCTGGGCCAGGTTCTGGGTCTACCCTGTCCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239816 132 - 90373283 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCCGTTTGTCACATGCCCTGCAGGACACACACATCTGTCTTTCCTGCACGGTCCTCCATGGAGTCCTGGGCCAGGTTCTGGATCTACCCTGTCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141812 132 + 156971 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCCGTTTGTCACATGCCCTGCAGGACACACACATCTGTCTTTCCTGCGTGGTCCTCCATGGAGTCCTGGGCCAGGTTCTGGGTCTACCCTGTCCCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490611 132 - 5823884 GTCAGAAGGGGCCTCAGTTTCTCCATTTGTCCTGGCCCTGTTTGTCACATGCCCTACCAGACACACACATCTGTCTTTCCTGCACAGCCCTCCATGGAGTCCTGGGCCAGGTTCTGGGTCTACCCTGTCCCC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204734 130 + 16356641 GTCAGAAGGGGCCTTAGTTTCTCCATCTGTCCTGGCCCTGTTTGTCACATGCCCTGCAGGACACACAT--CTGTCTTTCCTGCACAGCCCTCCATGGAGCCCTGGGCCAGGTTCTGGGTCCACCCTGTCCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1066925 132 + 1231380 GTCAGAAGGGGCCTCAGTTTCTCCATCTGTCCTGGCCCTGTTTGTCACATGCCCTGCAGGACACACACAGCTGTCTTTCCTGCAGAGCCCTCCATGGAGCCCTGGGCCGGGTTCTGGGTCCACCGTGTCCCC i cebCap1.NW_016107870v1 C 0 I 26 s aotNan1.NW_018500483v1 2606045 132 + 11732439 GTCAGAAGGGGTCTCAGTTTCTCCATCTGTCCTGGCCCTGTTTGTCATGTGCCCTGCAGGACACACACATCTGTCTTTCCTGCACAGCCCTCCACGGAGCCCTGGGCCAGGTTCTGGGTCCGCCCTGTCCCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56788995 130 + 57149010 GTCAGAAGGGGCTTCAGCTTCTCCATTCGTCCTGGCCCTTTTGGTCA-ATGCCCTGTGGGACACACACATCTGTCCTTCCTGCCCATGC-TCCCTGGAGTCCTGGACGGGGGCCTGGGTTCACTCTGTCCCC i micMur3.chr18 I 119 C 0 s proCoq1.NW_012150197v1 1792343 132 - 2029793 GTCAGAAGGGGCTTCGGCTTCTCCATTCGTCCCGGCCCTTTTGGTCACACGCCCTGCAGGACACACACATTTGTCCTTCCTGCCCAAACATCCAAGGAGTCCTGGGCTGGGGCCTGGGTTCACTCTGTCCCC i proCoq1.NW_012150197v1 C 0 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=224235.000000 s hg38.chr20_KI270870v1_alt 20299 21 + 183433 ATCCCAGTGTGCTCAGCCCAG s panTro5.chr20 66353482 21 + 66533130 ATCCCAGTGTGCTCAGCCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032581 21 + 62195757 ATCCCAGTGTGCTCAGCCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422204 21 - 578057 ATCCCAGTGTGCTCAGCCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947666 21 - 110113093 atcccagtgtgctcagcccag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675148 21 - 92844088 ATCCCAGTGTGCTCAGCCCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337679 20 + 96509753 AT-CCAGTGTGCTCAGCCCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809231 21 - 16982598 ATCCCAGTGTGCTCAGCCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616541 21 - 3785965 ATCCCAGTGTGCTCAGCCCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239948 21 - 90373283 ATCCCAGTGTGCTCAGCCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141944 21 + 156971 ATCCCAGTGTGCTCAGCCCAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490743 21 - 5823884 ATCCCAGTGTGCTCAGCTCAG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204864 20 + 16356641 -TCCCAGTGTGCTCAGCCCAG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2606177 20 + 11732439 -TCCCAGTGTGCTCAGCCCAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56789125 21 + 57149010 ATCCCAGTGTGCTCAGCCCAG i micMur3.chr18 C 0 I 63 s proCoq1.NW_012150197v1 1792475 21 - 2029793 ATCCCAGTGTGCTCAGCCCAG i proCoq1.NW_012150197v1 C 0 I 64 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I e cebCap1.NW_016107870v1 1067057 26 + 1231380 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=33881.000000 s hg38.chr20_KI270870v1_alt 20320 5 + 183433 GGCAG s panTro5.chr20 66353503 5 + 66533130 GGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032602 5 + 62195757 GGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422225 5 - 578057 GGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947687 5 - 110113093 ggcag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675169 5 - 92844088 GCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337699 5 + 96509753 GCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809252 5 - 16982598 GCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616562 5 - 3785965 GCCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239969 5 - 90373283 GCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141965 5 + 156971 GCCAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490764 5 - 5823884 GGCAG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204884 5 + 16356641 GGCAG i saiBol1.JH378156 C 0 I 15 s aotNan1.NW_018500483v1 2606197 5 + 11732439 GGCAG i aotNan1.NW_018500483v1 C 0 I 15 e proCoq1.NW_012150197v1 1792496 64 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789146 63 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e cebCap1.NW_016107870v1 1067057 26 + 1231380 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=454218.000000 s hg38.chr20_KI270870v1_alt 20325 57 + 183433 TAG--------------GCCACATCACACCAGGTCTTCAGTGGCCTCCCTCCTCCATCCCCAGGGATGTCG s panTro5.chr20 66353508 57 + 66533130 TAG--------------GCCACATCACACCAGGTCTTCAGTGGCCTCCCTCCTCCATCCCCAGGGATGTCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032607 57 + 62195757 TAG--------------GCCACATCACACCAGGTCTTCAGTGGCCTCCCTCCTCCATCCCCAGGGATGTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422230 57 - 578057 TAG--------------GCCACATCACACCAGGTCTTCAGTGGCCTCCCTCCTCCATCCCCAGGGATGTCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947692 57 - 110113093 tag--------------ggcacatcacactaggtcttcagtGGCCTCCCTCCTCCATCCCCAGGGATGTCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675174 71 - 92844088 TAGGGAGGCGACTGCTTGGCACATCACAGCAGGTCTTCGATGGCCTCCCTCCTCCATCCCCAGGGATGTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337704 71 + 96509753 TAGGGAGGCGACTGCTTGGCACATCACAGCAGGTCTTCGATGGCCTCCCTCCTCCATCCCCAGGGATGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809257 71 - 16982598 TAGGGAGGCGACTGCTTGGCACATCACAGCAGGTCTTCGATGGCCTCCCTCCTCCATCCCCAGGGATGTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616567 71 - 3785965 TAGGGAGGAGACTGCTTGGCACATCACAGCAGGTCTTCGATGGCCTCCCTCCTCCATCCCCAGGGATGTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90239974 71 - 90373283 TAGGGAGGAGACTGCTTGGCACATCACAGCAGGTCTTCAATGGCCTCCCTCCTCCATCCCCAGGGATGTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 141970 71 + 156971 TAGGGAGGAGACTGCTTGGCACATCACAGCAGGTCTTCAATGGCCTCCCTCCTCCATCCCCAGGGATGTTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490769 71 - 5823884 TAGGGAGGAGACTGCTTGGCACATCACAGCAGGTCTTCGATGGCCTCCCTCCTCCATCCCCAGGGATGTTC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204904 57 + 16356641 --------------TTGGGCTCATCACACGGGGTCTTTGATGGCTTCCCTCCTCCACCCCCAGGGATATCC i saiBol1.JH378156 I 15 C 0 s cebCap1.NW_016107870v1 1067083 57 + 1231380 --------------TTGGACTGATCACACTGGGTCTTCGATGGCTTCCCTCCTCCATCCCCAGGGATGTCC i cebCap1.NW_016107870v1 I 26 C 0 s aotNan1.NW_018500483v1 2606217 57 + 11732439 --------------TTGGGCTCATCACACGGGGTCTTCGATGGCTTCCCTCCTCCGTCCCCAGGGATGTCC i aotNan1.NW_018500483v1 I 15 C 0 e proCoq1.NW_012150197v1 1792496 64 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789146 63 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=12000.000000 s hg38.chr20_KI270870v1_alt 20382 1 + 183433 C s panTro5.chr20 66353565 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032664 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422287 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947749 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675245 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337775 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809328 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616638 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90240045 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 142041 1 + 156971 C i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490840 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204961 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1067140 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2606274 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1792560 1 - 2029793 C i proCoq1.NW_012150197v1 I 64 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789146 63 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=603169.000000 s hg38.chr20_KI270870v1_alt 20383 56 + 183433 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGCACTGGCAGGAGCAGG s panTro5.chr20 66353566 56 + 66533130 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGCACTGGCAGGAGCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032665 56 + 62195757 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGCACTGGCAGGAGCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422288 56 - 578057 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGCACTGGCAGGAGCAGG i gorGor5.CYUI01015848v1 C 0 I 1 s nomLeu3.chr13 109947750 56 - 110113093 AGCGATGGCAGGTGGAGGAGGATTTTACCAGCAGAGGCAGAACTGGCAGGAGCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675246 56 - 92844088 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGAACTGGCAGGAGCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337776 56 + 96509753 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGAACTGGCAGGAGCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809329 56 - 16982598 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGAACTGGCAGGAGCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616639 56 - 3785965 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAAAACTGGCAGGAGCAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90240046 56 - 90373283 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGAACTGGCAGGAGCAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 142042 56 + 156971 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGAACTGGCAGGAGCAGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490841 56 - 5823884 AGGGATGGCAGGTGGAGGAGGCTTTTACCAGGAGAGGCAGAACTGGCAGGAGCAGG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16204962 56 + 16356641 AGGGATGGCAGATGGAGGAGGCTTTTACAAGAAGAGGGAGAACTGGCCGGAGCAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1067141 56 + 1231380 AAGGATGGCAGGTGGAGGAGGCTTTTACAAGGAGAGGCAGAACTGGCGGGAGCAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2606275 55 + 11732439 A-GGATGGCAGGTGGAGGAGGCTTTTACAAGGAGAGGCGGAACCAGCGGGAGCAAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56789209 52 + 57149010 AGGGATGGCAGGTGGAGG-GGCTTTCGCTGGGAGAG---GAACTGGAAGAAGCAGG i micMur3.chr18 I 63 C 0 s proCoq1.NW_012150197v1 1792561 55 - 2029793 AGGGACGGCAGGTGGAGG-GGCTTTCGCTGGGAGAGGGAGAACTGGAAGAAGCAGG i proCoq1.NW_012150197v1 C 0 C 0 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I e calJac3.chr5 58140151 0 + 159171411 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=362373.000000 s hg38.chr20_KI270870v1_alt 20439 30 + 183433 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC s panTro5.chr20 66353622 30 + 66533130 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032721 30 + 62195757 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422345 30 - 578057 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i gorGor5.CYUI01015848v1 I 1 C 0 s nomLeu3.chr13 109947806 30 - 110113093 TTTTTAAAGACTTGAGGTTGTCATAGCAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675302 30 - 92844088 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337832 30 + 96509753 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809385 30 - 16982598 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616695 30 - 3785965 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90240102 30 - 90373283 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 142098 30 + 156971 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490897 30 - 5823884 TTTTTAAAGTCTTGAGGTTGTCATAGCAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58140151 30 + 159171411 TTTTCAAAGTCTTGAGGTTGTCATAGTGAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16205018 29 + 16356641 -TGTTCAAGTCTTGAGATTGTTATGGTGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1067197 28 + 1231380 --TTTTCAGTCTTGAGGTTGTTGTAGCGAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2606330 30 + 11732439 TTTTCAAAGTCTTGAGGTTGTCATAGTGAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56789261 30 + 57149010 CTTTCAAAGTCGTGAGGTTGCCACAGCAAC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1792616 30 - 2029793 TTTTCAAAGTCTTGGGGTTGCCACAGCAAC i proCoq1.NW_012150197v1 C 0 I 12199 e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=79868.000000 s hg38.chr20_KI270870v1_alt 20469 13 + 183433 TGCATCCCTGCTG--- s panTro5.chr20 66353652 13 + 66533130 TGCATCCCCGCTG--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032751 13 + 62195757 TGCATCCCCACTG--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422375 13 - 578057 TGCATCCCTGCTG--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947836 10 - 110113093 TGCATCCCTG------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675332 10 - 92844088 TGCATCCCTG------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337862 10 + 96509753 TGCATCCCTG------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809415 10 - 16982598 TGCATCCCTG------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616725 10 - 3785965 TGCATCCCTG------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90240132 10 - 90373283 TGCATCCCTG------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 142128 10 + 156971 TGCATCCCTG------ i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490927 10 - 5823884 TGCATCCCTG------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58140181 10 + 159171411 TGCACCCTTG------ i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16205047 10 + 16356641 TGCATCCTTG------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1067225 10 + 1231380 TGCACCCTTG------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2606360 10 + 11732439 TGCGCCCTTG------ i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56789291 13 + 57149010 TGCATCCCTG---CTG i micMur3.chr18 C 0 I 280 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=2934650.000000 s hg38.chr20_KI270870v1_alt 20482 352 + 183433 AGGTTCTGAGGTTCGGTGGCTGTGCAGACGTCCATGTGCTGGAGCTGGGCATGTACAAAAGCCACGTGGT-GGCTCCAGGCTGCTGCTGTGGCACAGGTGTGCCTTGGCGTTggtgaggtgtggcacggctgtgcggtggcgcaggtgaggtgaggtgTGAGGTGGTATACGTGGCCTTG-CGGGG--CAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGTGGGGAAGGGCAGGAGCTGGATCTGGCCCTCCCCTGTGCTGACCTAGATTCTGCCCGGCCTGCAGGTCCTGCAGCAGACGTGCCTGTAATGAGTCTAATTGTGCAGGCTCTG s panTro5.chr20 66353665 352 + 66533130 AGGTTCTGAGGTTCGGTGGCTGTGCAGACGTCCATGTGCTGGAGCTGGGCATGTACGAAAGCCACGTGGC-GGCTCCAGGCTGCTGCTGTGGCACAGGTGTGCCTTGGCGTCggtgaggtgtggcatggctgtgcggtggcgcaggtgaggtgaggtgTGAGGTGGTATACGTGGCCTTG-CGGGG--CAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGTGGGGAAGGGCAGGAGCTGGATCTGGCCCTCCCCTGTGCTGACCCAGATTCTGCCCGGCCTGCAGGTCCTGCAGCAGACGTGCCTATAATGAGTCTAGTTGTGCAGGCTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62032764 352 + 62195757 AGGTTCTGAGGTTCGGTGGCTGTGCAGACGTCCATGTGCTGGAGCTGGGCATGTACGAAAGCCACGTGGC-GGCTCCAGGCTGCTGCTGTGGCACAGGTGTGCCTTGGCGTCggtgaggtgtggcatggctgtgcggtggcgcaggtgaggtgaggtgTGAGGTGGTATACGTGGCCTTG-CGGGG--CAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGTGGGGAAGGGCAGGAGCTGGATCTGGCCCTCCCCTGTGCTGACCTAGATTCTGCCCGGCCTGCAGGTCCTGCAGCAGACGTGCCTATAATGAGTCTAGTTGTGCAGGCTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422388 352 - 578057 AGGTTCTGAGGTTCGGTGGCTGTGCAGACGTCCATGTGCTGGAGCTGGGCATGTACGAAAGCCACGTGGC-GGCTCCAGGCTGCTGCTGTGGCACAGGTGTGCCTTGGCGTTggtgaggtgtggcacggctgtgcggtggcgcaggtgaggtgaggtgTGAGGTGGTATACGTGGCCTTG-CGGAG--CAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGTGGGGAGGGGCAGGAGCTGGATCTGGCCCTCCCCTGTGCTGACCTAGATTCTGCCCGGCCTGCAGGTCCTGCAGCAGAAGTGCCTATAATGAGTCTAGTTATGCAGGCTCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109947846 349 - 110113093 -----CTGAGGTTCGGTGGCTGTGCAGACGTCCATGTGCTGGAGCTGGGCATGTACGAAAGCCATGTGGC-GGCTCCAGGCTGCTGCTgtggcactggtgtgccttggcgttggtgaggcgtggcacggctgtgcagtggcgcaggtgaggtgaggtgtgaggtggTATATGTGGCCTTG-CGGGGCTCAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAGTGTGCTCTGCAGTGGGGAAGGGCAGGAGCTGGATCTGGCCCTCCCCTGTGCTGACCTAGATTCTGCCTGGCCTGCAGGTCTTGCAGCAGACGTGTCTATAATGAGTCTAGTTGTGCAGGCTCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675342 348 - 92844088 -----CTGAGGTTCGGTGGCTGTGCAGACGTCCCTGTGCTGGAG-TGGGCATGTTTGAAAGCCATGTGGA-GCCTCCAGGCTGCTGCTGTGGCACCGGCGTGCCTTGGCGTTAGTGAGCTGTGGCACGGCTGTGCAGTGACGCAGGTGAGGTGAGGTGTGAGGTGGTGTATGTGGCCTTG-CAGGGCTCAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGGGGGGAAGGGCAGGAGCTGGATCTGCCCCTCCCCTGTGCTGACCTAGATTCTGCCTGGCCTGCAGGTCCTGCAGCAGACGTGTCTGCAATGAGTCTAGCTGTGCAGGCTCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96337872 348 + 96509753 -----CTGAGGTTCGGTGGCTGTGCAGACGTCCCTGTGCTGGAG-TGGGCATGTTTGAAAGCCATGTGGA-GCCTCCAGGCTGCTGCTGTGGCACCGGCGTGCCTTGGCGTTAGTGAGCTGTGGCACGGCTGTGCAGTGACGCAGGTGAGGTGAGGTGTGAGGTGGTGTATGTGGCCTTG-CAGGGCTCAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGGGGGGAAGGGCAGGAGCTGGATCTGCCCCTCCCCTGTGCTGACCTAGATTCTGCCTGGCCTGCAGGTCCTGCAGCAGACGTGTCTGCAATGAGTCTAGCTGTGCAGGCTCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809425 348 - 16982598 -----CTGAGGTTCGGTGGCTGTGCAGACGTCCCTGTGCTGGAG-TGGGCATGTTTGAAAGCCATGTGGA-GCCTCCAGGCTGCTGCTGTGGCACCGGCGTGCCTTGGCGTTAGTGAGCTGTGGCACGGCTGTGCAGTGACGCAGGTGAGGTGAGGTGTGAGGTGGTGTATGTGGCCTTG-CAGGGCTCAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGGGGGGAAGGGCAGGAGCTGGATCTGCCCCTCCCCTGTGCTGACCTAGATTCTGCCTGGCCTGCAGGTCCTGCAGCAGACGTGTCTGCAATGAGTCTAGCTGTGCAGGCTCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3616735 348 - 3785965 -----CTGAGGTTCGTTGGCTGTGCAGACGTCCCTGTGCTGGAG-TGGGCATGTTTGAAAGCCATGTGGA-GCCTCCAGGCTGCTGCTGTGGCACCGGCGTGCCTTGGCGTTGGTGAGCTGTGACATGGCTGCGCAGTGACGCAGGTGAGGTGAGGTGTGAGGTGGCGTATGTGGCCTTG-CAGGGCTCAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGGGGGGAAGGGCAGGAGCTGGATCTGCCCCTCCCCTGTGCTGACCTAGATTCTGCCTGGCCTGCAGGTCCTGCAGCAGACGTGTCTGCAATGAATCTAGCTGTGCAGGCTCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90240142 347 - 90373283 -----CTGAGGTTCGGTGGCTGTGCAGACGTCCCTGTGCTGGAG-TGAGCATGTTTGAAAGCCgc-tgga-ggctccaggctgcggctgtggcacaggcgtgcCTTGGCGTTGGTGAGCTGTGGCACGGCTGTGCAGTGACGCAGGTGAGGTGAGGTGTGAGGCGGTGTGTGTGGCCTTG-CAGGGCTCAGTTTTCCTTGCCTGTGACCTCAGCCTATATGCAGCTCCAAAATGTGGTCTGCAGGGGGGAAGGGCAGGAGCTGGATCTGCCCCTCCCCTGTGCTGACCTAGATTCTGCCCGGCCTGCAGGTTCTGCAGCAGACGTGTCTGCAATGAGTCTAGCTGTGCAGGCTCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 142138 348 + 156971 -----CTGAGGTTCGGTGGCTGTGCAGACGTCCCTGTGCTGGAG-TGGGCATGTTTGAAAGCCATGTGGA-GCCTCCAGGCTGCTGCTGTGGCACCGGCGTGCCTTGGCGTTGGTGAGCTGTGGCATGGCTGTGCAGTGACGCAGGTGAGGTGAGGTGTGAGGTGGTGTATGTGGCCTTG-CAGGGCTCAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGGGGGGAAGGGCAGGAGCTGGATCTGCCCCTCCCCTGTGCTGACCTAGATTCTGCCTGGCCTGCAGGTCCTGCAGCAGACGTGTCTGCAATGAGTCTAGCTGTGCAGGCTCCG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5490937 348 - 5823884 -----CTGAGGTTCAGTGGCTGTGCAGACGTCCCTGTGCTGGAG-TGGGCATGTTTGAAAGCCATGTGGA-GGCTCCAGGCTGCTGCTGTGGCACAGGCATGCCTTGGTGTTGGTGAGCTGTGGCACGGCTGTGCAGTGGCGCAGGTGAGGTGAGGTGTGAGGTGGTGTATGTGGCCTTG-CAGGGCTCAGTTTTCCTTGCCTGTGACCTCAGCCTATATCCAGCTCCAAAATGTGGTCTGCAGGGGGGAAGGGCAGGAGCTGGATCTGCCCCTCCCCTGTGCTGACCTAGATTCTGCCTGGCCTGCAGGTCCTGCAGCAGACGTGTCTGCCATGAGTCTAGCTGTGCAGGCTCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58140191 263 + 159171411 -----CCGAAGT------------------------------------------------------TGGGTGGTTCCAGGCTGGGGCTGGGAAACAGGCATGCCTTGGTGTTGGTGA-GTGTGGCACAGCTGTGCAGGGGTGC-----AGGTGAGGTGTAAGGTGGCATATGTGGCCTTGTCAGGTCTCAGTTTTCCTTGCCTGTGACCTCAGCCTGTATCTAGCTCCAAAATGTGGTCTGCAGAGGGTTAGGGCAGGAGCT----------------------------GGCTCTGTCCGGCCTGTGGGTCCTCCAGCAGATGCGTCTGTAATGAGTCCAGTCATGCAGGCTCCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16205057 328 + 16356641 -----CCGAGGTTGGGTGGCTGTGCAGATGTCCGAGTGCTGGAGCTGGGTATGTACAGAAGCCACGTGGGTGGCTCCAAGCCGGGGCTGTGGCACAGGTGTACCTCAGTGTTG-----GTGTGGCACAGCTGTGCAGGGGTGC-----AGGTGAGGTGTAAG---------GTGGCCTTGTCAGGGCTCAGTTTTCCTTGCCTGTGACCTCAGCCTGTATCCAGCTCCAAAATGTGGTCTGCAGTGGGGAAGGGCAGGAGCTGGATCTGCCCTTCCCCTGTGCTGACCTAGGCTCTGCCCGGCCTG-GGGTCCT---GCAGATGCGTCTGTAATGAGTCCAGTCGTGCAGGCTCCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1067235 344 + 1231380 -----CCGAGGTTGGGTGGCTGTGCAGATGTCCAAGTGCCGGAGCTTGGTATGTACAGAAGCCACGTGGGTGGCTCCACGCCGGGGCTGTGGCACAGGTGTGCCTCAGTGTTGGTGA-GTGTGGCACAGCCgtgcaggtgtgc-----aggtgaggtgtaaggtggcatatgtgGCCTTGTCAGGGCTCAGCTTTCCTTGCCTGTGACCTCAGCCTGTATCCAGCTCCAAAATGTGGTCTGCAGTGGGGAAGGGCAGGAGCTGGATCTGCCCTTCCCCTGTGCTGACCTAGGCTCTGCCCGGCCTG-GGGTCCTGCAGCAGATGTGTCTGTAATGAGTCCAGTCGTGCAGGCTCCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2606370 252 + 11732439 -----CTGAGGCTGGGCGGCTGTGCAGATGTCTGAGTGCTGGAGCTGGGTATGTACAGAAGCCACGTGGGTGGCTCCAGGCTGGGGCTGGGA-------------------------------------------AGGGGTGC-----AGGTGAGGTGTAAGGTGGCATATGTGGTCTTATCAGGGCTCAATTTTCCTTGCC------------------------------TGTGGTCTGCAGTGGGGAAGGGCAGGAGCTGGATCTA---------------------GGCTCTGCCCGGCCTGCGGGTCCCGCACCAGATGCGTCTGTAATGAGTCCAGTCGTGCAGGCTCCG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789304 280 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=1163209.000000 s hg38.chr20_KI270870v1_alt 20834 102 + 183433 TGGTCACCATAGCTTTCGGTACCCAAGGGGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCACCTTCCACCCCCACAACCGTGGCCTCAGTCAT s panTro5.chr20 66354017 102 + 66533130 TGGTCACCATAGCTTTCAGTACCCAAGGGGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCACCTTCCACCCCCACAACCATGGCCTCAGTCAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62033116 102 + 62195757 TGGTCACCATAGCTTTCGGTACCCAAGGGGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCACCTTCCACCCCCACAACCATGGCCTCAGTCAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422740 102 - 578057 TGGTCACCATAGCTTTCGGTACCCAAGGGGGTAGACAGAGGTTTGAATCGAGGACTGGGCAGCTCCCTCGCCTTCCACCCCCACAACTGTGGCCTCAGTCAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109948195 102 - 110113093 TGGTCACCACAGCTTTTGGTACCCAAGGGGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCACCTTCCACCCCCACAACTGTGGCCTCAGTCAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675690 102 - 92844088 TGGTCACCATAGCTTTTGGTACCCAAGGAGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCGCTTTCCACCCCCACAACTGTGGCCTCAGTCAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96338220 102 + 96509753 TGGTCACCATAGCTTTTGGTACCCAAGGAGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCGCTTTCCACCCCCACAACTGTGGCCTCAGTCAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809773 102 - 16982598 TGGTCACCATAGCTTTTGGTACCCAAGGAGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCGCTTTCCACCCCCACAACTGTGGCCTCAGTCAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3617083 102 - 3785965 TGGTCACCATAGCTTTTGGTACCCAAGGAGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCGCTTTCCACCCCCACAACTGTGGCCTCAGTCAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90240489 102 - 90373283 TGGTCACCATAGTTTTTGGTACCCAAGGAGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCGCTTTCCACCCCCACAACTGTGGCCTCAGTCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 142486 102 + 156971 TGGTCACCATAGCTTTTGGTACCCAAGGAGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCGCTTTCCACCCCCACAACTGTGGCCTCAGTCAT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5491285 102 - 5823884 TGGTCACCGTAGCTTTTGGTACCCAAGGAGGTAGACAGAGGTTTGAATCTAGGACTGGGCAGCTCCCTTGCTTTCCACCCCCACAACTGTGGCCTCAGTCAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58140454 101 + 159171411 TGGTCACCATAGCATT-GGTACCCAAGGGGGTAGACAGAGATTTGAATCTAGGACTGGGCAGCTTCCTCACCTTCCACCCCCACAACTGTGGCCTCAGTCAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16205385 101 + 16356641 TGGTCACCATAGCGTT-GGTACCCAAGGGGGTAGACAGAGGTTTGAACCTAGGACTGGGCAGCTCCCTCACCTTCCACCCCTACAACTGTGGCCTCCGTCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1067579 101 + 1231380 TGGTCACCATAGCGTT-GGTACCCAAGGGGGTGGACAGAGGCTTGAATCTAGGACTGGGCATCTCCCTCACCTACCATCCCCACAACTGTGGCCTCAGTCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2606622 101 + 11732439 TGGTCACCATAGCATT-GGTACCCAAGGGGGTAGACGGAGGTTTGAATCTAGGACTGGGCAGCTCCCTCACCTTCCACCCCCACAGCTGTGGCCTCAGTCAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56789584 102 + 57149010 TGGCCACCATAGTTTTTGGTCCTCAAGGGGGTGGACAGAGGTTTAAATCCAGGACTGGACGATTCCTTCACCTTCTGCCCACAGAGCTGTGGTCTCAGTCAT i micMur3.chr18 I 280 I 8100 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 182567 607 - 397369 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=7290123.000000 s hg38.chr20_KI270870v1_alt 20936 811 + 183433 CAACGGACGAG------------------------------------GCCAAGTCAGTAGCGGAAGCCGGGCCGTGCCCTCGGCTGGGTCCTGTGGCCTTCGGGCTGCCACCCTGTGCTGGGGATGGAGGT-GGGGGCATGGGGCTGCTGCCAACACCCGGCTGGTGCTTGCAGCTGTGGTGCCAACAATTC------------------------TCACGCCGCGCTGTCGTCTTTTTGGCTTCTGGAATTTTGAGCCAATTCGGGCTCACC-GGGTTGATGCCGCCCCTCATCTGGCCGAGGCTTCTGGGAGCCTGAGGGAGTCGGGACCCCACCCTCAGCGGGGCATGGCGTGGGCCACGTCACCATCCGCCTTGTGTTTATGGGATGATTTAAAAGAACACGGCAGTCTTGGAAGAGTGGTGATGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCGTGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTGGGCAAGGGCACCGTATGAAAGGCTGGGTGGGGATCAAGGGGAGCCAGGGTTCAGGCTGGAGGCCCCCTGAAGGGAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATGGCTGCAGTCTTGGAGGAGAGCAAAGTCCAGACAAGCCTAGGGACGGGACAGAGgaggtggacagaggtggacagaggtgTGGGAGGC------------------------------CGGCCACGGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCCTCAGCTGAATGGTTGCCTCCCGCCCAGGTCGGGCCCCACTTCTTGTGCCCAGGGCCCTCTCTAAACTCTTCATCATGGCCCCTCTCCGCCTCCCCCCGGACTCCAGGCC s panTro5.chr20 66354119 811 + 66533130 CAACGGACGGG------------------------------------GCCAAGTCAGTAGCGGAAGCCGGGCCGTGCCCTCGGCTGGGTCCTGTGGCCTTCGGGCTGCCACCCTGCGCTGGGGATGGAGGT-GGGGGCATGGGGCTGCCACCAACACCCGGCTGGTGCTTGCAGCTGTGGTGCCAACAATTC------------------------TCACGCCGCGCTGTTGTCTTTTTGGCTTCTGGAATTTTGAGCCAATTCGGGCTCACC-GGGGTGATGCCGCCCCTCATCTGGCCGAGGCTTCTGGGAGCCTGAGGGAGTCGGGACCCCACCCTCAGCAGGGCATGGCGTGGGCCACGTCACCATCCGCCTTGTGTTTATGGGATGATTTAAAAGAACACGGCAGTCTTGGAAGAGTGGTGACGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCGTGGTCTGGGCCAGACCTAGGCAGTTGGGGCTCTGGGCTGGGCAAGGGCACCGTATGAAAGGCTGGGTGGGGATCAAGGGGAGCCAAGGTTCAGGCTGGAGGCCCCCTGAAGGGAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATGGCTGCAGTCTTGGAGGAGAGCAAAGTCCAGACAAGCCTAGGGACGGGACAGAGgaggtggacagaggtggacagaggtgTGGGAGGC------------------------------CGGCCACTGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCCTCAGCTGAATGGTTGCCTCCCGCCCGGGTCGGGGCCCACTTCTTGTGCCCAGGGCCCTCTCTAAACTCTGCATCATGGCCCCTCTCCGCCTCCCCCCGGACTCCAGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62033218 811 + 62195757 CAACGGACGGG------------------------------------GCCAAGTCAGTAGCGGAAGCCGGGCCGTGCCCTCGGCTGGGTCCTGTGGCCTTCGGGCTGCCACCCTGCGCTGGGGATGGAGGT-GGGGGCATGGGGCTGCCACCAACACCCGGCTGGTGCTTGCAGCTGTGGTGCCAACAATTC------------------------TCACGCCGCGCTGTCATCTTTTTGGCTTCTGGAATTTTGAGCCAATTCGGGCTCACC-GGGGTGATGCCGCCCCTCATCTGGCCGAGGCTTCTGGGAGCCTGAGGGAGTCGGGACCCCACCCTCAGCAGGGCATGGCGTGGGCCACGTCACCATCCGCCTTGTGTTTATGGGATGATTTAAAAGAACACGGCAGTCTTGGAAGAGTGGTGACGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCATGGTCTGGGCCAGACCTAGGCAGTTGGGGCTCTGGGCTGGGCAAGGGCACCGTATGAAAGGCTGGGTGGGGATCAAGGGGAGCCAGGGTTCAGGCTGGAGGCCCCCTGAAGGGAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATGGCTGCAGTCTTGGAGGAGAGCAAAGTCCAGACAAGCCTAGGGACGGGACAGAGgaggtggacagaggtggacagaggtgTAGGAGGC------------------------------CGGCCACTGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCCTCAGCTGAATGGTTGCCTCCCGCCCGGGTCGGGGCCCACTTCTTGTGCCCAGGGCCCTCTCTAAACTCTGCATCATGGCCCCTCTCCGCCTCCCCCCGGACTCCAGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 422842 811 - 578057 CAACGGACGAG------------------------------------GCCAAGTCAGTAGCGGAAGCTGGGCCGTGCCCTCGGCTGGGTCCTGTGGCCTTCGGGCTGCCACCCTGCGCTGGGGATGGAGGT-GGGGGCATGGGGCTGCCGCCAACACCCGGCTGGTGCTTGCAGCTGTGGTGCCAACAATTC------------------------TCACGCCGTGCTGTCGTCTTTTTGGCTTCTGGAATTTTGAGCCAATTTGGGCTCACG-GGGGTGATGCCGCCCCTCATCTGGCCGAGGCTTCTGGGAGCCTGAGGGAGTCGAGACCCCACCCTCAGCGGGGCATGGTGTGGGCCACGTCACCATCCGCCTTCTGTTTATGGGATGATTTAAAAGAACACGGCAGTCTTGGAAGAGTGGTGACGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCGTGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTGGGCACGGGCACCGTATGAAAGGCTGGGTGGGGATCAAGGGGAGCCAGGGTTCAGGCTGGAGGCCCCCTGAAGGGAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATGGCTGCAGTCTTGGAGGAGAGCAAAGTCCAGACAAGCCTAGGGTCGGGACACAGgaggtggacagaggtggacagaggtgTGGGAGGC------------------------------CGGCCGCGGCCCACTGCACAGGGTGTCTTGGGGACGCCAGCTCAGCCCCAGGCCTCAGCTGAATGGTTGCCTCCCGCCCGGGTCGGGGCCCACTTCTTGTGCCCAGGGCCCTCTCTAAACTCTTCACCATGGCCTCTCTCCGCCTCCCCCCGGACTCCGGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109948297 812 - 110113093 CAACGGACGAG------------------------------------GCCAAGTCAGTAGCAGAAGCCGGGCCGTGCCCTCGGCTGGGTGCTATGGCCTTCGGGCTGCCACCCTGAGCTGGGGATGGAGGT-GGGGGCATGGGGCTGCCGCCAACACCTCGATGGTGCTTGCAGCTGTGGTGCTAACAATTC------------------------TAACGCCACGCTGTCATCTTTTTGGCTTCTGGAATTTTCAGCCAATTTGGGCTCACCGGGGGTGATGCCGCCGCTCATCTGGCCGAGCCTTCTGGGAGCCTGAGGGAGTCGGGACCCCACCCTAAGCGGGGCATGGCGTGGGCCACGTCACCATCCACCTTGTGTTTATGGGATGATTTAAAAGAACACGGCAGTCTCGGAAGAGTGGTGATGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCGTGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTTGGCAAGGGCACCGTATGAAAGGCCGGGTGGGGATCAAGGGGAGCCAGGGTTCAGGCTGGAGGGCCCCTGAGGGGAGATGAGGGTCTGCAGGGGCTGTGGCATTAGGATCTTCATGGCTGCAGTCTTGGAGGAGAGCAAAGTCCAGACAAGCCTAGGGACGGGGCAGAGGAGGTGGACAGAGGTGGACAGAGGGGTGGGAGGC------------------------------CGGCCATGGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCCTCAGCTTAATGGTTGCCTCTCACCCGGGTCAGGGCCCACTTCTTGTGCCCAGGGCCCTCTCTAAGCTCTTCATCATGGCCTGTCTCCGCCTCCCCCCGGACCCCAGGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92675792 811 - 92844088 CAACGGACGAG------------------------------------GCCAAGTCAGTAGGGGAAGCCGGGCCGTGCCCTCCGCTGGGTACTGTGGCCTTTGGGCTGCCACCCTGAGCCGGGGATGGAGGT-GGGGGCATGGGGCTGCCGCCAGCACCTCGATGGT-CCTGCAGCTGTGGTGCTCACAGTTCTAACACCATGCC------------TAACACCATGCTGTCATCTTTTT-GCTTCTGGAATTTTGAGCCACTTTGGGCTCACC-AGGGTGATGGCACCCCTCATTTGGCGGAGCCATCTGAGAGCCTGAGGGAGTCGGGACCCCACCCTAAGCTGGGCATGGCGTGGGCCACGTCACCATCCACCTTGTGTTTATGCGATGATTTAAGAGAACACGGCAGTCTCGGAAGAGCGGTGGTGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCATGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTGGGCAAGGTCACCGTCTAAAAGGCTGGGTGGGGATCAAGGGGAGCCAGGGCTCAGGCTGGAGGCACCCTGAGGGCAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATTGCTTCAGTCTTGGAGGAGACCAAAGTCCAGACAAGCCTAGGGACGGGACAGAGGAGGT----------GGACAGAGGTGTGGGAGGC------------------------------CGGCCACGGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCGTCAGCTTAATGGTTGCCTCCCGCCCGGGTCGGGGCCCACTTCTTGTGCCCAGGGCCCTCTCCAAACTCTTCATCATGGCCCCTCTCCACCTCCCCCAGGACTCCAGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96338322 811 + 96509753 CAACGGACGAG------------------------------------GCCAAGTCAGTAGGGGAAGCCGGGCCGTGCCCTCCGCTGGGTACTGTGGCCTTTGGGCTGCCACCCTGAGCCGGGGATGGAGGT-GGGGGCATGGGGCTGCCGCCAGCACCTCGATGGT-CCTGCAGCTGTGGTGCTCACAGTTCTAACACCATGCC------------TAACACCATGCTGTCATCTTTTT-GCTTCTGGAATTTTAAGCCAATTTGGGCTCACC-AGGGTGATGGCACCCCTCATCTGGCTGAGCCTTCTGAGAGCCTGAGGGAGTCGGGACCCCACCCTAAGCTGGGCATGGCGTGGGCCACGTCACCATCCACCTTGTGTTTATGCGATGATTTAAGAGAACACGGCAGTCTCGGAAGAGCGGTGGTGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCATGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTGGGCAAGGTCACCGTCTAAAAGGCCGGGTGGGGATCAAGGGGAGCCAGGGCTCAGGCTGGAGGCACCCTGAGGGCAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATTGCTTCAGTCTTGGAGGAGACCAAAGTCCAGACAAGCCTAGGGACGGGACAGAGGAGGT----------GGACAGAGGTGTGGGAGGC------------------------------CGGCCACGGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCGTCAGCTTAATGGTTGCCTCCCGCCCGGGTCGGGGCCCACTTCTTGTGCCCAGGGCCCTCTCCAAACTCTTCATCATGGCCCCTCTCCACCTCCCCCGGGACTCCAGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16809875 811 - 16982598 CAATGGACGAG------------------------------------GCCAAGTCAGTAGGGGAAGCCGGGCCGTGCCCTCCGCTGGGTACTGTGGCCTTTGGGCTGCCACCCTGAGCCGGGGATGGAGGT-GGGGGCATAGGGCTGCCGCCAGCACCTCGATGGT-CCTGCAGCTGTGGTGCTCACAGTTCTAACACCATGCC------------TAACACCATGCTGTCATCTTTTT-GCTTCTGGAATTTTGAGCCAATTTGGGCTCACC-AGGGTGATGGCACCCCTCATCTGGCCGAGCCTTCTGAGAGCCTGAGGGAGTCGGGACCCCACCCTAAGCTGGGCATGGCGTGGGCCACGTCACCATCCACCTTGTGTTTATGCGATGATTTAAGAGAACACGGCAGTCTCGGAAGAGCGGTGGTGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCATGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTGGGCAAGGTCACCGTCTAAAAGGCCGGGTGGGGATCAAGGGGAGCCAGGGCTCAGGCTGGAGGCACCCTGAGGGCAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATTGCTTCAGTCTTGGAGGAGACCAAAGTCCAGACAAGCCTAGGGACGGGACAGAGGAGGT----------GGACAGAGGTGTGGGAGGC------------------------------CGGCCACGGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCGTCAGCTTAATGGTTGCCTCCCGCCCGGGTCGGGGCCCACTTCTTGTGCCCAGGGCCCTCTCCAAACTCTTCATCATGGCCCCTCTCCACCTCCCCCGGGACTCCAGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3617185 823 - 3785965 CAACGGACGAG------------------------------------GCCAAGTCAGTAGGGGAAGCCGGGCCGTGCCCTCGGCTGGGTCCTGTGGCCTTTGGGCTGCCACCCTGAGCCGGGGATGGAGGT-GGGGGCATGGGGCTGCCGCCAGCACCTCGATGGT-CCTGCAGCTGTGGTGCTCACAGTTctaacaccatgcctaacaccatgcttaacaccatgcTGTCATCTTTTT-GCTTCTGGAATTTTGAGCCAATTTGGGCTCACC-AGGGTGATGGCACCCCTCATCTGGCCGAGCCTTCTGAGAGCCTGAGGGAGTCGGGACCCCACCCTAAGCTGGGCATGGTGTGGGCCACGTCGCCATCCACCTTGTGTTTATGTGATGATTTAAGAGAACACGGCAGTCTCGGAAGAGCGGTGGTGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCATGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTGGGCAAGGGCACCGTCTAAAAGGCCGGGTGGGGATCAAGGGGAGCCAGGGCTCAGGCTGGAGGCCCCCTGAGGGCAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATTGCTTCAGTCTTGGAGGAGACCGAAGTCCAGACAAACCTAGGGGCGGGACAGAGGAGGT----------GGACAGAGGTGTGGGAGGC------------------------------CGGTCACGGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCGTCAGCTTAATGTTTGCCTCCCGCCCGGGTCGGGGCCCACTTCTTGTGCCCAGGGCCCTCTCCAAACTCTTCATCATGGCCCCTCTCCACCTCCCCCGGGACTCCAGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90240591 765 - 90373283 CAATGGACGAG------------------------------------GCCAAGTCAGTAGGGGAAGCCGGGCTGTGCCCTCTGCTGGGTCCTGTGGCCTTTGGGCTGCCACCCTGAGCCGGGGATGGAGGT-GGGGGCATGGG--TGCTGCCAGCACCTCGATGGT-CCTGCAGCTGTGGTGCTCACAGTTctaacaccatgcc------------taacaccatgccGTCATCTTTTT-GCTTCTGGAATTTTGAGCCAATTTGGGCTCACC-AGGGTGATGGCGCCCCTCATCTGGCCGAGCCTTCTGGGAGCCTGAGGGAGTTGGGACCCCCCCCCAAGCTGGGCATGGCATGGGCCACGTCACCATCCACCTTGTGTTTATGCGATGATTTAAGAGAACACGACAATCTCGGAAGAGCGGTGGTGGCGTTTAGCTTAATGGCTTTTGATGCAGAAGCCAAAAGCGTGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTGGGCAAGGGCACCGTCTAAAAGGCCAGGTGGGGATCAAGGGGAGCCAGGGCTCAGGCTGGAGGCCCCCTGAGGGCAGATGAGGGTCTGCAAGGGCTGTGGCATGAGGATCTTCATTGCTTCAGTCTTGGAGGAGACCAAAGTCCAGACAAGCCTAGGGACGGGACAGAGGAGGT----------GGACAGAGGTGTGGGAGGC------------------------------CGGCCACGGCCCACTGCACAGGGGGT--------------------------------------------CTCCCGCCCGGGTTGGGGCCCACTTCTTGTGCCCAGGGCCCTTTCCAAGCTCTTCATCATGGCCCCTCTCCGCCTCCCCTGGGACTCCAGGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 142588 811 + 156971 CAGTGGACGAG------------------------------------GCCAAGTCAGTAGGGGAAGCCGGGCCGTGCCCTCGGCTGGGTCCTGTGGCCTTTGGGCTGCCACCCTGAGCCAGGGATGGAGGT-GGGGGCATGGGGCTGCCGCCAGCACCTCGATGGC-CCTGCAGCTGTGGTGCTCACAGTTCTAACACCATGCC------------TAACACCATGCTGTCATCTTTTT-GCTTCTGGAATTTTGAGCCAATTTGGGCTCACC-AGGGTGATGGCACCCCTCATCTGGCCGAGCCTTCTGAGAGCCTGAGGGAGTCGGGACCCCACCCTAAACTGGGCATGGTGTGGGCCACGTCACCATCCACCTTGTGTTTATGCGATGATTTAAGAGAACACGGCAGTCTCGGAAGAGCGGTGGCGGCGTTTAGCTTAATGGCTTTTGATGCAGAGGCCAAAAGCATGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTGGGCAAGGGCACCGTCTAAAAGGCCGGGTGAGGATCAAGGGGAGCCAGGGCTCAGGCTGGAGGCCCCCTGAGGGCAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATTGCTTCAGTCTTGGAGGAGACCAAAGTCCAGACAAGCCTAGGGACGGGACAGAGGAGGT----------GGACAGAGGTGTGGGAGGC------------------------------CGGTCACGGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCGTCAGCTTAATGGTTGCCTCCCGCCCGGGTCGGGGCCCACTTCTTGTGCCCAGGGCCCCCTCCAAACTCTTCATCATGGCCCCTCTCCACCTCCCCCGGGACTCCAGGCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5491387 830 - 5823884 CAATGGAGGAG------------------------------------GCCAAGTCAGTAGGGGAAGCCGGGCCGTGCCCTCGGCTGGGTCCTGTGGCCTTTGGGCTGCCACCCTGAGCTGGGGATGGAGGT--GGGGCATGGGGCTGCCGCCAGCACCTCGATGGT-CCTGCAGCTGTGGTGCTCACAATTC------------------------TAACACCATGCTGTCATCTTTTTGGATTCTGGAATTCTGAGCCAATTTGGGCTCACC-AGGGTGATGCCGCCCCTCATCTGGCCGAGCCTTCTGGGAGCCTGAGGGAGTCGGGACCCCACCCTAAGCTGAGCATGGCGTGGGCCACGTCACCATCCACCTTGTGTTTATGGGATGATTTAAGAGAACACGGCAGTCTTGGAAGAGCGGTGGTGGCGTTTAGCTTAATGGCTTTTGACGCAGAAGCCAAAAGTGTGGTCTGGGCCAGACCTAGGCAGTCAGGGCTCTGGGCTGGGCAAGGGCACCGTATAAAAGGCCGGGTGGGGATCAAGGGGAGCCAGGGCTCAGGCTGGAGGCCCCCTGAGGGCAGATGAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATTGCTTCAGTCTTGGAGGAGAGCAAAGTCC-GGCAAGCCTAGGGACGGGACAGAGGAGGTGGA-------GGACAGA-GTGTGGGAGGCTGGCCGCGGCCCACTGCACAGGGGTCTTGGTGGCCACGGCCCACTGCACAGGGGGTCTTGGGGACGCCAGCTCAGCCCCAGGCGTCAGCTTAATGGTTGCCTCCCGCCCGGGTCAGGGCCCACTTCTTGTGCCTAGGGCCCTCTCCAAGCTCTTCATCATGGCCCCTCTCCGCCTCCCCCGGGACTCCAGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58140555 823 + 159171411 CAATGGACAAGGCCAAGCCAGCCAGGCCTCAGTCATCAACAGATGAGGCCAGGTCAGTAAAGGATGCTGGGCCATGCCCTGAGCCAGGTCCTGTGGTCTTCAGGCTGCCACCCTGAGCTGGGGATGGGGGAAGGGGGCATGGGGCCTATGCCAACACCTCAGTGGTGCTTGCAGCTGTGGTGCTAACAATTC------------------------TAACACCATGCTATTGTCTTTTGGGCTTCTGGAATTTTGAGCCAATTTGGGCTCACT--GGGTGATGCTGCCCCTCATCTGGCC-----------AAGCCTGAGGGAGTAGGGATTCCATTCTGAGCTGGGCATGGTGTGGGCCACGTCATCATCCATCTTGTGTTTATGGGTTGATTTATAAGCACATGGCAGTCTTGGAAGAGTGGTGACAGTGTTTAGCTTAGTGGC-TTTGATGCAGAAGCCAAAAGCATAGTCTGGGCCAGACCTAGGAAGCCGGGGCTCCGGGCTGGGCAAAGGCACCGTATAACAGGCTGGGTGGAGATCAAGGGGAGCCAGGGCTCAGGCTGGGGGTCCCTTGACAGGCGGTGAGGGTCTGCAAGGGCTGCGGCATGAGGATCTTCATGGCTCCAGTCTTGGAGGAGAACAAAGCCCAGACAAGCCTGGGGACGGGACAGGGGAGGT----------GGACAGAGGTGTGGGAGGC------------------------------CAGCCACGG-CTACTTCACAGGA-GTCTTGGGGATGCCAGCTTGGCTCCAGGCCTCGGCTTGATGGTTGCCTTCTGCCAGGGTCAGGTCCCACTTCTTGTGCCCAGAGCCCTCTCCAAGCCCTTCATCATGGCCCCTCTCTGCCTTCCCCTGGACTCCAGGCC i calJac3.chr5 C 0 I 8 s saiBol1.JH378156 16205486 809 + 16356641 CAACGGACGAGGCCAAGTCAGCCAGGCCTCAGTCATCAACAGATGAAGCCAGGTCAGTAAAGGATGCCGTGCCATGCCCTCGGCCAGGTCCTGTGGTCTTCAGGCTGCCGCCCTGAGCTGGCGATGGAGGTGGGGGGCGCGGGGCCTGTGCCAGCACCTTAATGGTGCTTGCAGCTGTGATGCTAACATTTC------------------------TAACACCATGCTGTTGTCTTTTTGGCTTCTGGAATTTTGAGCCAATTTGGGCTCACT-GGGGTGATGCTGCCTCTCATCTGGCC-----------GAGCCTGAGGGAGTAGGGACCCCATTCTAAGCTGGGCATGGCGTGGGCCACATCATCATCCACCTCGTATTTATGGGTTGATTTACAAGAACATGGTAGCCTTGGAAGAGTGGTGACAGTGTTTGGCTTAGTGGC-TTTGATGCAGAAGCCAAAAGTATGGTCTGGGCCAGACCTAGGAAGCCAGGGCTCCAGGCTGGGCAAAGACACCATATAA-AAGCTGGGTGGAGATCAAGGGGAGCCAGGGCTCAGGCTGGGGGTCCCCTGAGGGAAGATGAGGGTCTGCAGGGGCCATGGCATGAGGATCTTCATGGCTCCAGTCTTGGAGGAGGGCAAAGCCCAGACAAGCCTGGGGACG-----------------------GGACAGAGGTGGGGGAGGC------------------------------CAGCCACGG-CCACTTCACAGGA-GTCTTGGGGACACCGGCTCAGCTCCAGGCCTCAGCTTGACAGTTGCCTTCTGCTGGGGTCAGGTCCCACTTGTCGCGCCCAGAGTCCTCTCCAAGACCTTCATCACGGCCCCTCTCTGCC-TCCCCTGGACTCCAGGCC i saiBol1.JH378156 C 0 I 8 s cebCap1.NW_016107870v1 1067680 800 + 1231380 CAATGGACGaggccaggtcagccag----------------------gccaggtcgggaaaggatgctgggccatgccctcggccaggTCCTGTGGTCTTCAGGCTGCCACCCTGAGCTGGGGATGGAAGTGGGGGGCACAGGGCCTGTGCCAACACCTCAATGGTGCTTGTAGCTATGATGCTAACAATTC------------------------TAACACCATGCTGTTGTCTTTTTGGCTTCTGGAATTTTGAGCCAATTTGGGCTCAGT-GGGGTGATGCTGCCCCTCATCTGGCC-----------GAGCCTGAGGGAGTAGGGACCCCATTTTAAGCTGGGCATGGCGTGGGCCACGTCACCATCCACCTTGTGTTTATGGGTTGATTTATAAGAACATGGCGGTCTTGGAAGAGTGGTGACAGTGTTTAGCTTAGTGGC-TTTGATGCAGAAGCCAAAAGCATGGTCTGGGCCAGACCTAGGAAGCCGGGACTCCGAGCTGGGCAAAGGCACCATATAA-AAGCTGGGTGGAGATCAAGGGGAGCCAGGGCTCAGGCTGGGGGTCCCCTGAGGGGAGATAAGGGTCTGCAGGGGCTGTGGCATGAGGATCTTCATGGCTCCAGTCTTGGAGGAGAGCAAAGCCCAGACAAGCCTGGGGACGGGACAGAGGAGGT----------GGACAGGGGTGTGGGAGGC------------------------------CAGCCATGG-CCACTTCACAGGA-GTCTTAGGGACGCCAGCTTGGCTCCAGGCCTCAGCGTGACGGTTGCCTTCTGCCAGGGTCAGGTCCTACTTCTCGTGCCCAGAGTCCTCTCCAGGCCCTTCATCATGGCCCCTCTCTGCC-TCCCCTGGACTCCAGGCC i cebCap1.NW_016107870v1 C 0 I 9 s aotNan1.NW_018500483v1 2606723 733 + 11732439 CAACAGATGAG------------------------------------GCCAGGTCAGTAAAGGATGCCAGGCCATGCCCTTGGCCAGGTCCCGTGGTCTTCAGGCTGCCACCCTGAGCTGGGGATGGAGGT-GGGGGCATGGGGCCTGTGCCAACACCTCAGTGGTGCTTGCAGCTGTGATGCTAA------------------------------------------------------------------------CAATTTGGGCTCACT-GGGGTGATGCTGCCCCTCACCTGGCT-----------GAGCCCGAGGGAGTAGGGACCCCATTCTAAGCTGGGCATGGCGTGGGCCACGTCACCACCCACCTTGTGTTTATGGGTTGATTTACAAGAACAT-GCAGTCTTGGAAGAGTGGTGACAGTGTTTAGTTTAGTGGC-TTTGATGCAGAAGCCAAAAGCATGGTCTGGGGCAGACCTGGGAAGCCAGGGCTCCGGGCGGGGCAAAGGCACCGTGTAAAAGGCTGGGTGGAGATCAACGGGAGCCAGGACTCAGGCTGGGGGTCCCCTGAGGGGAGATGAGGGTCTGCAGGGGCCGTGGCTTGAGGATCTTCATGGCTCCAGTCTTGGAGGACAGCAAAGCCCAGACAAGCCTGGGGACAGGACAGAGGAGGT----------GCACAGAGGTGTGGGAGGC------------------------------CAGCCACGG-CCACATCACAGGA-GTCGTGGGGA--CCAGCTCGGCTCCAGGCCTCAGCTTGATGGCTGCCTCCTGCCAGGGTCAGGTCCTACTTCTTGTGCCCAGAGCCCTCTCCAAGCCTTTTGTCATGGCCC--CTCTGCT-TCCCCCAGACTCCAGGCC i aotNan1.NW_018500483v1 C 0 I 8 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=9555.000000 s hg38.chr20_KI270870v1_alt 21747 1 + 183433 A s panTro5.chr20 66354930 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034029 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 423653 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949109 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92676603 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339133 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16810686 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618008 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241356 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143399 1 + 156971 A i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492217 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58141386 1 + 159171411 A i calJac3.chr5 I 8 C 0 s saiBol1.JH378156 16206303 1 + 16356641 A i saiBol1.JH378156 I 8 C 0 s aotNan1.NW_018500483v1 2607464 1 + 11732439 A i aotNan1.NW_018500483v1 I 8 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e cebCap1.NW_016107870v1 1068480 9 + 1231380 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=410703.000000 s hg38.chr20_KI270870v1_alt 21748 44 + 183433 GC--------GCTGTGTCTGTGCTGTGCGTCTTTTGAGCTTTGTCTCCAGCC s panTro5.chr20 66354931 44 + 66533130 GC--------GCTGCGTCTGTGCTGTGCGTCTTTTGAGCTTTGTCTCCAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034030 44 + 62195757 GT--------GCTGCGTCTGTGCTGTGCGTCTTTTGAGCTTTGTCTCCAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 423654 44 - 578057 GT--------GCTGTGTCTGTGCTGTGCGTCTTTTGAGCTTTGTCTCCAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949110 52 - 110113093 gctgggcagtgctgtgtctgtgctgtgcGTCTTTTGAGCTTTGTCTCGAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92676604 52 - 92844088 GCTGGGCAGCGCTGTGTCTGCACTGTGCGTCTTTTGAGCTTCGTCTCCAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339134 52 + 96509753 GCCGGGCAGCGCTGTGTCCGCACTGTGCGTCTTTTGAGCTTCGTCTCCAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16810687 52 - 16982598 GCTGGGCAGCGCTGTGTCTGCACTGTGCGTCTTTTGAGCTTCGTCTCCAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618009 52 - 3785965 GCTGGGCAGCGCTGTGTCTGCACTGTGCGTCTTTTGAGCTTCGTCTCCAGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241357 52 - 90373283 GCTGGGCAGCGCTGTGTCTGCGCTGTGCGTCTTTTGAGCTTCGTCTCCAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143400 52 + 156971 GCTGGGCAGCGCTGTGTCTGCACTGTGCGTCTTTTGAGCTTCGTCTCCAGCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492218 52 - 5823884 GCTGGGCAGCGCTGTGTCTGTGCTGTGCGTCTTTTGAGCTTCCTCTCCAGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58141387 44 + 159171411 --------GCACTGTGTCTGCGGTGTGCATCTTCTGAGCTTCGTCTCCAGCC i calJac3.chr5 C 0 I 977 s saiBol1.JH378156 16206304 44 + 16356641 --------GCGCGGTGTCTGCGGTGTGCGTCTTCTGAGCTTCATCTCCAGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1068489 44 + 1231380 --------GCGCCGTGTCTGTGGTGTGCATCTTGCGAGCTCCGTCTCCAGCC i cebCap1.NW_016107870v1 I 9 C 0 s aotNan1.NW_018500483v1 2607465 44 + 11732439 --------GCGCTGCGTCTGCCGTGTGCATCTTCTGAGCTTCATCTCCAGCC i aotNan1.NW_018500483v1 C 0 I 987 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=25770.000000 s hg38.chr20_KI270870v1_alt 21792 3 + 183433 CTG s panTro5.chr20 66354975 3 + 66533130 CTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034074 3 + 62195757 CTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 423698 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949162 3 - 110113093 CTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92676656 3 - 92844088 CCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339186 3 + 96509753 CCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16810739 3 - 16982598 CTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618061 3 - 3785965 CCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241409 3 - 90373283 CCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143452 3 + 156971 CCG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492270 3 - 5823884 CCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142408 3 + 159171411 ctg i calJac3.chr5 I 977 C 0 s saiBol1.JH378156 16206348 3 + 16356641 CTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1068533 3 + 1231380 CTG i cebCap1.NW_016107870v1 C 0 I 975 s aotNan1.NW_018500483v1 2608496 3 + 11732439 CTG i aotNan1.NW_018500483v1 I 987 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=76345.000000 s hg38.chr20_KI270870v1_alt 21795 9 + 183433 GACCCTGGG s panTro5.chr20 66354978 9 + 66533130 GACCCTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034077 9 + 62195757 GACCCTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 423701 9 - 578057 GACCCTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949165 9 - 110113093 GACCCTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92676659 9 - 92844088 GACCCTGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339189 9 + 96509753 GACCCTGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16810742 9 - 16982598 GACCCTGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618064 9 - 3785965 GACCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241412 9 - 90373283 GACCCTTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143455 9 + 156971 GGCCCTGGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492273 9 - 5823884 GACCCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142411 9 + 159171411 gaccctGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16206351 9 + 16356641 GATtgtggg i saiBol1.JH378156 C 0 I 968 s aotNan1.NW_018500483v1 2608499 9 + 11732439 GACCCTGGG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e cebCap1.NW_016107870v1 1068536 975 + 1231380 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=9100.000000 s hg38.chr20_KI270870v1_alt 21804 1 + 183433 G s panTro5.chr20 66354987 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034086 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 423710 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949174 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92676668 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339198 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16810751 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618073 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241421 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143464 1 + 156971 G i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492282 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142420 1 + 159171411 G i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2608508 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16206360 968 + 16356641 I e cebCap1.NW_016107870v1 1068536 975 + 1231380 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=54024.000000 s hg38.chr20_KI270870v1_alt 21805 7 + 183433 CTCCTCC s panTro5.chr20 66354988 7 + 66533130 CTCCTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034087 7 + 62195757 CTCCTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 423711 7 - 578057 CTCCTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949175 7 - 110113093 CTCCTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92676669 7 - 92844088 CTCCTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339199 7 + 96509753 CTCCTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16810752 7 - 16982598 CTCCTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618074 7 - 3785965 CTCCTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241422 7 - 90373283 CTCCTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143465 7 + 156971 CTCCTCC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492283 7 - 5823884 CTCCTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142421 7 + 159171411 TTCGTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16207328 7 + 16356641 TTCGTCT i saiBol1.JH378156 I 968 C 0 s aotNan1.NW_018500483v1 2608509 7 + 11732439 TTCGTCT i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e cebCap1.NW_016107870v1 1068536 975 + 1231380 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=3364821.000000 s hg38.chr20_KI270870v1_alt 21812 384 + 183433 TTCTCGGGCCTCTTCCTGAAGCCTGAGGAG-CCACCCTCTGCTGGGGGAGGCTGAGTGTCCCTGCCTAGTCTGGGTGAGGGGAGTCACAG-CCCGGCCCAGACCCCACCCCGCTTACATGTATGGCAAGCCATGGCCTTGCTCTCCAGAAGCCATGGCAGCCGGGTGAGGATACTGTGAGCACAGGACTTGGTGTCCATCTTGGCTGTGCCCTCTCAGGAGCATCAGCCTGGTGACCTTGTGACCTCTTATGTCCCCTCTGCAGGAagggtgaccaacagtctggattggcccaggactgtccaggttttagcactgaatgccccacatcccaggaaatctcttggtcctggacacactgTTTATCAGTAGGGCCTACCCGGGGGA s panTro5.chr20 66354995 384 + 66533130 TTCTTGGGCCTCTTCCTGAAGCCTGAGGAG-CCACCCTCTGCTGGGGGAGGCTGAGTGTCCCTGCCTAGTCTGGGTGAGGGGAGTCACAG-CCCGGCCCAGACCCCACCCCGCTTACATGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCACGGCAGCCGGGCGAGGATACTGTGAGCACAGGACTTGGTGTCCATCTTGGCTGTGCCCTCTCAGGAGCGTCAGCCTGGTGACCTTGTGACCTCTTATGTCCCCTCTGCAGGAagggtgaccgacggtctggattggcccaggactgtccaggttttggcactgaatgccccacatcccaggaaatctcttggtcctggacacactgTTTATCAGTAGGGCCTACCCGGGGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034094 379 + 62195757 TTCTCGGGCCTCTTCCTGAAGCCTGAGGAG-CCACCCTCTGCTGGGGGAGGCTGAGTGTCCCTGCCTAGTCTGGGTGAGGGGAGTCACA------GCCCAGACCCCACCCCGCTTACATGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCACGGCAGCCGGGCGAGGATACTGTGAGCACAGGACTTGGTGTCCATCTTGGCTGTGCCCTCTCAGGAGCGTCAGCCTGGTGACCTTGTGACCTCTTATGTCCCCTCTGCAGGAagggtgaccgacggtctggattggcccaggactgtccaggttttggcactgaatgccccacatcccaggaaatctcttggtcctggacacactgTTTATCAGTAGGGCCTACCCGGGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 423718 384 - 578057 TTCTCGGGCGTCTTCCTGAAGCCTGAGGAG-CCACCCTCTGCTGGGGGAGGCTGAGTGTCCCTGCCTAGTCTGGGTGAGGGGAGTCACAG-CCCGGCCCAGACCCCACCCCGCTTACGTGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCACGGCAGCCAGGTGAGGATACTGTGAGCACAGGACTTGGTGTCCATCTTGGCTGTGCCCTCTCAGGAGCGTCAGCCTGGTGACCTTGTGACCTCTTATGTCCCCTCTGCAGGAagggtgaccaaccgtctggattggcccaggactgtccaggttttagcactgaatgccccacatcccaggaaatctcttggtcctggacacactgTTTATCAGTAGGGCCTACCTGGGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949182 381 - 110113093 TTCCCGGGCCTCTTCCTGAAGCCTGAGGAG-CCACCCTCTGCTGGGGGAGGCTGAGTGTCCCTGCCCAGTCTGGGTGAGGGGAATCACAG-CCCGGCCCAGACCCCA--CTGCTTACATGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCACGGCAGCCGGGTGAGGAGACTGTGAGCACAGGACTTGGTGTCCATCTTGGCTGTGCCCTCTCAGGAGCGTCAGCCTGGTGACCTTGTGACCTCTTATGTCCCCTCTGCAGGAagggtgaccaacagtctggattggcctgggactgtccaggttttagcactgaatg-cccacatcccaggaaatctcttggtcctggacaaactgTTTATCGGTAGGGTCTCCCCGGGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92676676 379 - 92844088 TTCCTGGGCCTCTTCCTGAAGCCTGAGGAG-CC-TCCTCTACTGGGGGAGGG---GTGTCCCTGCCCAGTCTGGGTGAGGGGAGTCGCAGCCCCGGCTCAGACCTCA--CTGCTCACATGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCACGGCAGCCTGCTGAGGATACTGTGAGCACAGGACTCGGTGTCCATCTTGGCTGTGCCCTCTCAGAAGCATCAGCCTGGTGACCTTGTGACCTCTTACGTCCCCTCTGCAGGAaaggtgaccaacagtctgggttggcctgggactgtccaggttttagcactgaatgccccatatcccaggaaatttcttggtcctggacaaaccTTTTATCAGTAGGGTCTACCCGGGGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339206 351 + 96509753 TTCCTGGGCCTGTTCCTGAAGCCTGAGGAG-CC-TCCTCTACTGGG------------------------------GGAGGGAGTCGCAGCCCCGGCTCAGACCTCA--CTGCTCACATGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCACGGCAGCCTGCTGAGGATACTGTGAGCACAGGACTCGGTGTCCATCTTGGCTGTGCCCTCTCAGAAGCATCAGCCTGGTGACCTTGTGACCTCTTACGTCCCCTCTGCAGGAaaggtgaccaacagtctgggttggcctgggactgtccaggttttagcactgaatgccccatatcccaggaaatttcttggtcctggacaaa-cTTTTATCAGTAGGGTCTACCCGGGGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16810759 379 - 16982598 TTCCTGGGCCTCTTCCTGAAGCCTGAGGAG-CC-TCCTCTACTGGGGAGGGG---GTGTCCCTGCCCAGTCTGGGTGAGGGGAGTCGCAGCCCCGGCTCAGACCTCA--CTGCTCACATGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCACGGCAGCCTGCTGAGGATACTGTGAGCACAGGACTCGGTGTCCACCTTGGCTGTACCCTCTCAGAAGCATCAGCCTGGTGACCTTGTGACCTCCTACGTCCCCTCTGCAGGAaaggtgaccaacagtctgggttggcctgggactgtccaggttttagcactgaatgccccatatcccaggaaatttcttggtcctggacaaaccTTTTATCAGTAGGGTCTGCCCGGGGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618081 353 - 3785965 TTCCTGGGCCTCTTCCTGAAGCCTGAGGAG-CC-TCCTCTACTGGGG-----------------------------GAGGGGAGTCGCAGCCCCGGCTCAGACCCCA--CTGCTCACATGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCACAGCAGCCTGCTGAGGATACTGTGAGCACAGGACTCGGTGTCCATCTTGGCTGTACCCTCTCAGAAGCATCAGCCTGGTGACCTTGTGACCTCTTACGTCCCCTCTGCAGGAaaggtgaccaacagtctgggttggcctgggactgtccaggttttagcactgaatgccccatatcccaggaaatttcttggtcctggacaaaccTTTTATCAGTAGGGTCTACCCGGGGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241429 353 - 90373283 TTCCTGGGCCTCTTCCTGAAGCCTGAGGAG-CC-TCCTCTACTGGGG-----------------------------GAGGGGAGTCGCAGCCCCGGCTCAGACCCCA--CTGCTCACATGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCATGGCAGCCTGGTGAGGATACTGTGCGCACAGGACTCGGTGTCCATCTTGGCTGTACCCTCTCAGAAGCATCAGCCTGGTGACCTTGTGACCTCTTACGTCCCCTCTGCAGGAaaggtgaccaacagtctgggttgacctgggactgtccaggttttagcactgaatgccccatatcccaggaaatttcttggtcctggacaaaccTTTTATCAGTAGGGTCTACCCGGGGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143472 379 + 156971 TTCCTGGGCCTCTTCCTGAAGCCTGAGGAG-CC-TCCTCTACTGGGGGAGGG---GTGTTCCTGCCCAGTCTGGGTGAGGGGAGTCGCAGCCCCGGCTCAGACCCCA--CTGCTCACATGTATGGCAAGTCATGGCCTTGCTCTCCAGAAGCCACAGCAGCCTGCTGAGGATACTGTGAGCACAGGACTCGGTGTCCATCTTGGCTGTACCCTCTCAGAAGCATCAGCCTGGTGACCTTGTGACCTCTTACATCCCCTCTGCAGGAaaggtgaccaatagtctgggttggcctgggactgtccaggatttagcactgaatgccccatatcccaggcaatttcttggtcctggacaaaccTTTTATCAGTAGGGTCTACCCGGGGGA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492290 381 - 5823884 TTCCTGGGCCTCTTCCTGAAGCCGGAGGAGCCC-TCCTCTCCTGGGGGAGGGT--GTGTCCCTGCCCAGTCTGGGTGAGGGGAGTTGCAGCCCCGGCTCAGACCCCA--CCGCTCACATGTAAGGCAAGTCATGGCCTTGCCCTCCAGAAGCCATGGCAGTCTGGTGAGGATACTGTGAGCACAGGACTCGGTGTCCATCTTGGCTGTACCCTCTCAGAAGCATCAGCCTGGTGACCTTGTGACCTCTTACGTCCCCTCTGCAGGAATggtgaccaacagtttgggttggcctgggactgtccagcttttagcactgaatgccccatatcccaggaaatttcttggtcctggacaaaccTTTTATCAGTAGGGTCTACCTGGGGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142428 358 + 159171411 TTCCTGGGCCTCTCCCTGAAGCCTGAGGAA-CCACCCTCTGCTGGGGAAGACTGAGTGTCCCTGCCCAGTCTGGGTG-GGGGATTCATAG-CCTGGGGCAGACCCCG--CCCATCACATGTATGGCAAGTCATGGCCTTG--CTCCAGAAGATGTGGCAGCCAGGTGGGGACACTGTGAGCACAGGACTTGGTATCCATCTTGGCTGTGCCCTCTTAGGAACCTCAGCCTGGT---------------------CCCTCTGCAGGAagggtgaccaacagtctgggtttgcctgggactgtccaggttttagtgctgaatgtcccacatcccagaaagactattggtcctgaacacactgCTTATCAGTAGGGTCTACCTGGGAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16207335 375 + 16356641 TTCCCAGGCCTCTCCCTGAAGCCTGAGGAG-CCAGCCTCTGGTGGCGGATTCTGAGTGTCCCTGCCGAGTCTGGGTG-GGGGAGTCACAG-CCCAGGGCAGACCCCA--CCC-TCACATGGATGGCAAGTCATGGCCTTG--CTCCAGAAGACGTGGCAGTTGGACGAGGACA-TGTGAGCACAGGACTTGGTGTCCATCTTGGCTGTGCTCTCTCAGGAGCCTCAGCCTGGTGACCCTGTGACCTCCTATGTCCCCTCTGCAGGAagggtgaccaacagtctgggtttgcttgggactgaccaggtttcagtgctgaatgtcccacatcccag-aagtctcttggtcctggacacactgCCTATCAGTAGGGTCTACCTGGG-GG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1069511 377 + 1231380 TTCCCGGGCCTCTCCCTGAAGCCTGAGGAG-CCAACCTCTGCTGGCGGATACTGAGTGTCCCTGCCCAGTCTGGGTG-GCGGAGTCACAG-CCCGGGGCAGACCCCA--CCC-TCACATGTATAGCAAGTCATGGCCTTG--CTCCAGAAGACGTGGCAGCCAGGCGAGGACA-TGGGAGCACAGGACTTGGTGTCCATCTTGGCTGTGCCCTCTCAGGAACCTCAGCCTGGTGACCTTGTGACCTCCCATGTCCCCTCTGCAGGAagggtgaccaacagtctgggtttgcctgggactgtccaggttttagtgctgaatatcccacatccaagaaagtctcttggtcctggacacactgCTTATCAGTAGGGTCTACCTGGGGGC i cebCap1.NW_016107870v1 I 975 C 0 s aotNan1.NW_018500483v1 2608516 379 + 11732439 TTCCCGGGCCTCTCCCTGAAGCCTGAGGAG-CCACGCTCTGCTGGGGGAGACTGAGTGTCCCTGCCCAGTCTGGGTG-GGGGAGTCACAG-CCCGGGGCAGACCCCA--CCGCTCACGTGTATGGCAAGTCATGGCCTTG--CTCCAGAAGACGTGGCAGCCGGGTGAGGACACTGTGAGCACGGGACTTGGTGTCCATCTTGGCTGTGCCCTCTCAGGAACCTCAGCCTGGTGACCTCATGACCTCCTACGTCCCCTCTGCAGGAagggtgaccaacagtctggatttgcctgggactgtccaggttttagtgctgaatgtcccacatccgagaaggtctcttggtcctggacacacGGCTTATCAGTAGGGTCTACCTGGGGGA i aotNan1.NW_018500483v1 C 0 I 66 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=288604.000000 s hg38.chr20_KI270870v1_alt 22196 37 + 183433 CATATGAGAAAGTGTTCCCTCCAGGAGAAGCTGTGCT s panTro5.chr20 66355379 37 + 66533130 CGTATGAGAAAGTGTTCCCTCCAGGAGAAGCTGTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034473 37 + 62195757 CGTATGAGAAAGTGTTCCCTCCAGGAGAAGCTGTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424102 37 - 578057 CATATGAGAAAGTGTTCCCTCCAGGAGAAGCTGTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949563 37 - 110113093 CATATGAGAAAGTGCTCCCCCCAGGAGAAGCTGTGCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92677055 37 - 92844088 CATATGAGAGAGTGGTCCCTTCAGGAGAAGCTGTGCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339557 37 + 96509753 CATATGAGAGAGTGGTCCCTTCAGGAGAAGCTGTGCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811138 37 - 16982598 CATATGAGAGAGTGGTCCCTTCAGGAGAAGCTGTGCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618434 37 - 3785965 CATATGAGAGAGTGGTCCCTTCAGGAGAAGCTGTGCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241782 37 - 90373283 CATATGAGAGAGTGCTCCCTTCAGGAGAAGCTGTGCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143851 37 + 156971 CATATGAGAGAGTGGTCCCTTCAGGAGAAGCTGTGCG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492671 37 - 5823884 CATATGAGAGAGTGCTCCCTTCAGGAGAAGCTGTGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142786 37 + 159171411 AATACACGAGGGTGCTCCCTCCAGGAGAAGCTGTGCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16207710 37 + 16356641 AATACATGAGGGCATCCCCTCCAGGAGAAGCTGTGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1069888 37 + 1231380 AATACATGAGGGCACTCCCTCCAGGAGAAGCTGTGCT i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=56361.000000 s hg38.chr20_KI270870v1_alt 22233 7 + 183433 GGGCATG s panTro5.chr20 66355416 7 + 66533130 GGGCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034510 7 + 62195757 GGGCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424139 7 - 578057 GGGCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949600 7 - 110113093 GTGCATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92677092 7 - 92844088 GGGCACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339594 7 + 96509753 GGGCACG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811175 7 - 16982598 GGGCATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618471 7 - 3785965 GGGCATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241819 7 - 90373283 GGGCATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143888 7 + 156971 GGGCATG i manLeu1.NW_012101369v1 C 0 C 0 s calJac3.chr5 58142823 7 + 159171411 GGGCATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16207747 7 + 16356641 GGGCATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1069925 7 + 1231380 GGGCATG i cebCap1.NW_016107870v1 C 0 I 26 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=56116.000000 s hg38.chr20_KI270870v1_alt 22240 16 + 183433 AGGGCACTCTGATGTG s panTro5.chr20 66355423 16 + 66533130 AGGGCACTCTGATGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034517 16 + 62195757 AGGGCACTCTGATGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424146 16 - 578057 AGGGCACCCTGATGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949607 16 - 110113093 ACGCCATCCTGATGTG i nomLeu3.chr13 C 0 I 102 s rheMac8.chr10 92677099 16 - 92844088 AGCCCACCCTGAGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339601 16 + 96509753 AGCCCACCCTGAGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811182 16 - 16982598 AGCCCACCCTGAGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618478 16 - 3785965 AGCCCACCCTGAGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241826 16 - 90373283 AGTGCACCCTGATGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143895 16 + 156971 AGTGCACCCTGATGGG i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=9092.000000 s hg38.chr20_KI270870v1_alt 22256 9 + 183433 TGTGTGGGT- s panTro5.chr20 66355439 9 + 66533130 TGTGTGGGT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034533 9 + 62195757 TGTGTGGGT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424162 9 - 578057 TGTGTGGGT- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92677115 9 - 92844088 -GGAGGGGCC i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96339617 9 + 96509753 -GGAGGGGCC i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16811198 9 - 16982598 -GGAGGGGCC i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3618494 9 - 3785965 -GGAGGGGCC i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90241842 9 - 90373283 -GGAGGGGCT i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101369v1 143911 9 + 156971 -GGAGGGGCT i manLeu1.NW_012101369v1 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=96629.000000 s hg38.chr20_KI270870v1_alt 22265 31 + 183433 GGCCTGGGCAAAGCTGTGCGGGGCATGAGGG s panTro5.chr20 66355448 31 + 66533130 GGCCTGGGCAAAGCTGTGCGGGGCATGAGGG i panTro5.chr20 C 0 T 35 s gorGor5.CYUI01015848v1 424171 31 - 578057 GGCCTGGGCAAAGCTGTGCAGGGCATGAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92677125 31 - 92844088 GGCCTGGGCAAAGCTGTGCGGGGCATGAGTG i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96339627 31 + 96509753 GGCCTGGGCAAAGCTGTGCGGGGCATGACTG i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16811208 31 - 16982598 GGCCTGGGCAAAGCTGTGCGGGGCATGAGCC i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3618504 31 - 3785965 GGCCTGGGCAAAGCTGTGCGGGGCATGAGTG i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90241852 31 - 90373283 GGCCTGGGCAAAGCTGTGCGGGGCATGAGCC i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101369v1 143921 31 + 156971 GGCCTGGGCAAAGCTGTGCGGGGCATGAGCC i manLeu1.NW_012101369v1 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034542 0 + 62195757 C e saiBol1.JH378156 16207754 0 + 16356641 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=25557.000000 s hg38.chr20_KI270870v1_alt 22296 10 + 183433 CACCCTGATG s gorGor5.CYUI01015848v1 424202 10 - 578057 CACCCTGATG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92677156 10 - 92844088 CACCCTGATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339658 10 + 96509753 CACCCTGATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811239 10 - 16982598 CACCCTGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618535 10 - 3785965 CACCCTGATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90241883 10 - 90373283 CACCCTGATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143952 10 + 156971 CACCCTGATG i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034542 0 + 62195757 C e saiBol1.JH378156 16207754 0 + 16356641 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355479 35 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=-4646.000000 s hg38.chr20_KI270870v1_alt 22306 4 + 183433 --TGGG s gorGor5.CYUI01015848v1 424212 3 - 578057 --TGG- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92677166 4 - 92844088 GGGG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339668 4 + 96509753 GGTG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811249 4 - 16982598 TGGG-- i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90241893 3 - 90373283 GGT--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 143962 4 + 156971 GGTG-- i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034542 0 + 62195757 C e saiBol1.JH378156 16207754 0 + 16356641 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355479 35 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=12557.000000 s hg38.chr20_KI270870v1_alt 22310 7 + 183433 GGGGGGC s panTro5.chr20 66355444 7 + 66533130 GGGTGGC i panTro5.chr20 T 35 C 0 s panPan2.chr20 62034542 3 + 62195757 ----GGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424215 7 - 578057 GGGGGGT i gorGor5.CYUI01015848v1 C 0 I 97 s rheMac8.chr10 92677170 7 - 92844088 AGGGGCT i rheMac8.chr10 C 0 I 4 s macFas5.chr10 96339672 7 + 96509753 GGGGGGC i macFas5.chr10 C 0 I 4 s macNem1.NW_012014244v1 16811253 7 - 16982598 AGGGGCC i macNem1.NW_012014244v1 C 0 I 4 s chlSab2.chr2 90241896 7 - 90373283 AGGGGGC i chlSab2.chr2 C 0 I 5 s manLeu1.NW_012101369v1 143966 7 + 156971 GGGGGGC i manLeu1.NW_012101369v1 C 0 I 5 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=16548.000000 s hg38.chr20_KI270870v1_alt 22317 6 + 183433 CTGGGC s panTro5.chr20 66355451 6 + 66533130 CTGGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034545 6 + 62195757 CTGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424319 6 - 578057 CTGGGC i gorGor5.CYUI01015848v1 I 97 C 0 s rheMac8.chr10 92677181 6 - 92844088 CTGGGC i rheMac8.chr10 I 4 C 0 s macFas5.chr10 96339683 6 + 96509753 CTGGGC i macFas5.chr10 I 4 T 62 s macNem1.NW_012014244v1 16811264 6 - 16982598 CTGGGC i macNem1.NW_012014244v1 I 4 C 0 s manLeu1.NW_012101369v1 143978 6 + 156971 CTGGGC i manLeu1.NW_012101369v1 I 5 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=55620.000000 s hg38.chr20_KI270870v1_alt 22323 31 + 183433 AAAGCTGTGCGGGGCATGAGGGCACCCTGAT s panTro5.chr20 66355457 31 + 66533130 AAAGCTGTGCGGGGCATGAGGGCACCCTGAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034551 31 + 62195757 AAAGCTGTGCGGGGCATGAGGGCACCCTGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424325 31 - 578057 AAAGCTGTGCGGGGCATGAGCACACCCTGAT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92677187 31 - 92844088 AAAGCTGTGCAGGGCATGAGTGCACCCTGAT i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811270 31 - 16982598 AAAGCTGTGCAGGGCACGAGTGCACCCTGAT i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101369v1 143984 31 + 156971 AAAGCTGTGCGGGGCATGAGCCCACCCTGAT i manLeu1.NW_012101369v1 C 0 I 2 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339689 62 + 96509753 T a score=2100.000000 s hg38.chr20_KI270870v1_alt 22354 1 + 183433 G s panTro5.chr20 66355488 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034582 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424356 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92677218 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811301 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101369v1 144017 1 + 156971 G i manLeu1.NW_012101369v1 I 2 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339689 62 + 96509753 T a score=910.000000 s hg38.chr20_KI270870v1_alt 22355 1 + 183433 T s panTro5.chr20 66355489 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034583 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424357 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 T 97 s manLeu1.NW_012101369v1 144018 1 + 156971 T i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339689 62 + 96509753 T a score=-507.000000 s hg38.chr20_KI270870v1_alt 22356 2 + 183433 TG- s panTro5.chr20 66355490 2 + 66533130 TG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034584 2 + 62195757 TG- i panPan2.chr20 C 0 C 0 s manLeu1.NW_012101369v1 144019 2 + 156971 -GG i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424358 97 - 578057 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339689 62 + 96509753 T a score=26304.000000 s hg38.chr20_KI270870v1_alt 22358 48 + 183433 GGGGGGTGTCTGGGCAAAGCTGTGCAGGGCATGAGGGCACCCTGATGT s panTro5.chr20 66355492 48 + 66533130 GGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panTro5.chr20 C 0 I 148 s panPan2.chr20 62034586 26 + 62195757 GGGGGGTGTCTGGGCAAAGCTGTGCA---------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424261 48 - 578057 GGGGGGGGCCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT i gorGor5.CYUI01015848v1 T 97 C 0 s manLeu1.NW_012101369v1 144021 48 + 156971 GGGCCAGGCCTGGGCAAAGCTGTGCGGGGCATGAGCCCACCCTGATGG i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339689 62 + 96509753 T a score=78.000000 s hg38.chr20_KI270870v1_alt 22406 8 + 183433 GACGGGGG- s panTro5.chr20 66355688 6 + 66533130 G--GGGGG- i panTro5.chr20 I 148 C 0 s gorGor5.CYUI01015848v1 424309 7 - 578057 -GGGGGGG- i gorGor5.CYUI01015848v1 C 0 C 0 s manLeu1.NW_012101369v1 144069 8 + 156971 -GTGGGGGG i manLeu1.NW_012101369v1 C 0 I 3 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034612 0 + 62195757 C e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339689 62 + 96509753 T a score=41557.000000 s hg38.chr20_KI270870v1_alt 22414 41 + 183433 GGCCTGGGCAAAGCTGTGTGGGGCATGAGGGCACCCTGATG s panTro5.chr20 66355694 41 + 66533130 GGCCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034612 21 + 62195757 --------------------GGGCATGAGCGCACCCTGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424316 41 - 578057 GGCCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96339627 41 + 96509753 GGCCTGGGCAAAGCTGTGCGGGGCATGACTGCACCCTGATG i macFas5.chr10 T 62 T 40 s manLeu1.NW_012101369v1 144080 41 + 156971 GGCCTGGGCAAAGCTGTGCGGGGCATGAGCCCACCCTGATG i manLeu1.NW_012101369v1 I 3 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=-1294.000000 s hg38.chr20_KI270870v1_alt 22455 1 + 183433 -T s panTro5.chr20 66355735 1 + 66533130 -T i panTro5.chr20 C 0 T 285 s panPan2.chr20 62034633 1 + 62195757 -T i panPan2.chr20 C 0 T 89 s gorGor5.CYUI01015848v1 424357 1 - 578057 -T i gorGor5.CYUI01015848v1 C 0 T 88 s manLeu1.NW_012101369v1 144122 1 + 156971 G- i manLeu1.NW_012101369v1 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=265.000000 s hg38.chr20_KI270870v1_alt 22456 12 + 183433 TGGGGGCGGTCT s manLeu1.NW_012101369v1 144123 12 + 156971 TGGGGGCCAGGC i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034634 89 + 62195757 T e gorGor5.CYUI01015848v1 424358 88 - 578057 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355736 285 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=21822.000000 s hg38.chr20_KI270870v1_alt 22468 50 + 183433 CTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATTTTGGGGGTGTGT-- s panTro5.chr20 66355451 50 + 66533130 CTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTTGGGGGGGTGT-- i panTro5.chr20 T 285 C 0 s panPan2.chr20 62034545 50 + 62195757 CTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTTGGGGGGGTGT-- i panPan2.chr20 T 89 C 0 s manLeu1.NW_012101369v1 144135 52 + 156971 CTGGGCAAAGCTGTGCGGGGCATGAGCCCACCCTGATGGGTGGGGGGCAGGC i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424358 88 - 578057 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=33403.000000 s hg38.chr20_KI270870v1_alt 22518 38 + 183433 CTGGGCAAAGCTGTGCAGGGCATGAGGGCACCCTGATG s panTro5.chr20 66355501 38 + 66533130 CTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034595 38 + 62195757 CTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424270 38 - 578057 CTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATG i gorGor5.CYUI01015848v1 T 88 C 0 s manLeu1.NW_012101369v1 144187 38 + 156971 CTGGGCAAAGCTGTGCGGGGCATGAGCCCACCCTGATG i manLeu1.NW_012101369v1 C 0 T 207 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=23495.000000 s hg38.chr20_KI270870v1_alt 22556 50 + 183433 T---GGGGGGGTGCCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT s panTro5.chr20 66355539 49 + 66533130 T---GGGGGG-TGTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034633 53 + 62195757 TTGGGGGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT i panPan2.chr20 C 0 T 142 s gorGor5.CYUI01015848v1 424308 50 - 578057 T---GGGGGGGGGCCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT i gorGor5.CYUI01015848v1 C 0 T 185 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=736.000000 s hg38.chr20_KI270870v1_alt 22606 11 + 183433 TGGGGGGGGTC s panTro5.chr20 66355588 10 + 66533130 -GGGGGGGGTG i panTro5.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034686 142 + 62195757 T e gorGor5.CYUI01015848v1 424358 185 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=22174.000000 s hg38.chr20_KI270870v1_alt 22617 42 + 183433 TCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTTG s panTro5.chr20 66355598 42 + 66533130 TCTGGGCAAAGCTGTGCGGGGCATGAGCGCACCCTGATGTTG i panTro5.chr20 C 0 T 100 s panPan2.chr20 62034544 42 + 62195757 CCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTTG i panPan2.chr20 T 142 C 0 s gorGor5.CYUI01015848v1 424173 42 - 578057 CCTGGGCAAAGCTGTGCAGGGCATGAGGGCACCCTGATGTGG i gorGor5.CYUI01015848v1 T 185 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=4146.000000 s hg38.chr20_KI270870v1_alt 22659 7 + 183433 GGGGGGT s panTro5.chr20 66355540 7 + 66533130 GGGGGGT i panTro5.chr20 T 100 C 0 s panPan2.chr20 62034586 7 + 62195757 GGGGGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424215 7 - 578057 GGGGGGT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=573.000000 s hg38.chr20_KI270870v1_alt 22666 2 + 183433 GT s panTro5.chr20 66355547 2 + 66533130 GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034593 2 + 62195757 GT i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424222 0 - 578057 C e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=20637.000000 s hg38.chr20_KI270870v1_alt 22668 38 + 183433 CTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATG s panTro5.chr20 66355549 38 + 66533130 CTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034595 38 + 62195757 CTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATG i panPan2.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 424222 38 - 578057 CTGGGCAAAGCTGTGTGGGGCATGAGGGCACCCTGATG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=24916.000000 s hg38.chr20_KI270870v1_alt 22706 52 + 183433 TGGGGGGGGTTGTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT s panTro5.chr20 66355587 51 + 66533130 TGGGGGGGGT-GTCTGGGCAAAGCTGTGCGGGGCATGAGCGCACCCTGATGT i panTro5.chr20 C 0 I 98 s panPan2.chr20 62034634 52 + 62195757 TGGGGGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT i panPan2.chr20 I 1 C 0 s gorGor5.CYUI01015848v1 424260 49 - 578057 TGGGGGGG---GCCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=300.000000 s hg38.chr20_KI270870v1_alt 22758 1 + 183433 G s panPan2.chr20 62034686 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424309 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355638 98 + 66533130 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=1200.000000 s hg38.chr20_KI270870v1_alt 22759 2 + 183433 GG s panTro5.chr20 66355736 2 + 66533130 GG i panTro5.chr20 I 98 C 0 s panPan2.chr20 62034687 2 + 62195757 GG i panPan2.chr20 C 0 T 189 s gorGor5.CYUI01015848v1 424310 2 - 578057 GG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=8499.000000 s hg38.chr20_KI270870v1_alt 22761 33 + 183433 GGGGTCTCTGGGCAAAGCTGTGCGGGGCATGAG s panTro5.chr20 66355738 33 + 66533130 GGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424312 33 - 578057 GGGGGGCCTGGGCAAAGCTGTGCGGGGCATGAG i gorGor5.CYUI01015848v1 C 0 T 172 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034689 189 + 62195757 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=748.000000 s hg38.chr20_KI270870v1_alt 22794 10 + 183433 GGCACCGTGA s panTro5.chr20 66355771 10 + 66533130 GGCACCCTGA i panTro5.chr20 C 0 T 143 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034689 189 + 62195757 T e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=5613.000000 s hg38.chr20_KI270870v1_alt 22804 68 + 183433 TGGGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTGGGGGGGGTGTCTGGGCA s panTro5.chr20 66355638 66 + 66533130 TGGGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGCGCACCCTGATGTGGGGGGG--GCCTGGGCA i panTro5.chr20 T 143 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034689 189 + 62195757 T e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=8586.000000 s hg38.chr20_KI270870v1_alt 22872 32 + 183433 AAGCTGTGCGGGGCATGAGGGCACCCTGATGT s panTro5.chr20 66355704 32 + 66533130 AAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panTro5.chr20 C 0 T 41 s panPan2.chr20 62034500 32 + 62195757 AAGCTGTGCTGGGCATGAGGGCACTCTGATGT i panPan2.chr20 T 189 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=19.000000 s hg38.chr20_KI270870v1_alt 22904 11 + 183433 GGCGGGGGGGG s panPan2.chr20 62034532 11 + 62195757 GTGTGTGGGTG i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355736 41 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=11678.000000 s hg38.chr20_KI270870v1_alt 22915 41 + 183433 GCCTGGGCGAAGCTGTGCGGGGCATGAGGGCACCCTGATGT s panTro5.chr20 66355695 41 + 66533130 GCCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panTro5.chr20 T 41 I 100 s panPan2.chr20 62034543 41 + 62195757 GCCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=2373.000000 s hg38.chr20_KI270870v1_alt 22956 8 + 183433 TGGGGGGG s panTro5.chr20 66355836 8 + 66533130 TGGGGGGG i panTro5.chr20 I 100 C 0 s panPan2.chr20 62034584 8 + 62195757 TGGGGGGG i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=100.000000 s hg38.chr20_KI270870v1_alt 22964 1 + 183433 G s panTro5.chr20 66355844 1 + 66533130 G i panTro5.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034592 0 + 62195757 C e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=10644.000000 s hg38.chr20_KI270870v1_alt 22965 42 + 183433 TGTCTGGGCAAAGCTGTGCGGGGCACGAGGTCACCCTGATGT s panTro5.chr20 66355845 42 + 66533130 TGTCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT i panTro5.chr20 C 0 T 151 s panPan2.chr20 62034592 42 + 62195757 TGTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATGT i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=391.000000 s hg38.chr20_KI270870v1_alt 23007 4 + 183433 TGGG s panPan2.chr20 62034634 4 + 62195757 TGGG i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355887 151 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=12302.000000 s hg38.chr20_KI270870v1_alt 23011 50 + 183433 GGGGGGTGTCTGGGCAAAGCTGCGCGGGGCATGAGGGCACGCTGATGT-GG s panTro5.chr20 66355736 51 + 66533130 GGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTGGG i panTro5.chr20 T 151 C 0 s panPan2.chr20 62034638 50 + 62195757 GGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT-GG i panPan2.chr20 C 0 T 144 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=5126.000000 s hg38.chr20_KI270870v1_alt 23061 60 + 183433 CAGGGGGTGTCTGGGCAAAGCTGCGCAGGGCATGAGGGCACCCTGATGTTGGGGGGGGTG s panTro5.chr20 66355787 60 + 66533130 GGGGGGGTGTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATGTTGGGGGGGGTG i panTro5.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034688 144 + 62195757 T e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=10333.000000 s hg38.chr20_KI270870v1_alt 23121 40 + 183433 TCTGGGCAAAGCTGTGCGGGGCATGAGGTCACCCTGATGT s panTro5.chr20 66355847 40 + 66533130 TCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT i panTro5.chr20 C 0 T 49 s panPan2.chr20 62034544 40 + 62195757 CCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panPan2.chr20 T 144 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=91.000000 s hg38.chr20_KI270870v1_alt 23161 1 + 183433 T s panPan2.chr20 62034584 1 + 62195757 T i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355887 49 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=2673.000000 s hg38.chr20_KI270870v1_alt 23162 9 + 183433 GGGGGGGTG s panTro5.chr20 66355838 9 + 66533130 GGGGGGGTG i panTro5.chr20 T 49 C 0 s panPan2.chr20 62034585 9 + 62195757 GGGGGGGTG i panPan2.chr20 C 0 T 50 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=10858.000000 s hg38.chr20_KI270870v1_alt 23171 43 + 183433 TCTGGGCAAAGCTGCGCGGGGCATGAGGACACCCTGATGTGGG s panTro5.chr20 66355847 43 + 66533130 TCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGTGGG i panTro5.chr20 C 0 T 199 s panPan2.chr20 62034544 43 + 62195757 CCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTTGG i panPan2.chr20 T 50 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=10755.000000 s hg38.chr20_KI270870v1_alt 23214 47 + 183433 GGGGGTGTCGGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT s panTro5.chr20 66355691 45 + 66533130 GGGGGCCT--GGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panTro5.chr20 T 199 T 196 s panPan2.chr20 62034587 47 + 62195757 GGGGGTGTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATGT i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=-139.000000 s hg38.chr20_KI270870v1_alt 23261 3 + 183433 T-GG s panPan2.chr20 62034634 4 + 62195757 TGGG i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355736 196 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=9785.000000 s hg38.chr20_KI270870v1_alt 23264 37 + 183433 GGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGGT s panTro5.chr20 66355540 37 + 66533130 GGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGGG i panTro5.chr20 T 196 T 98 s panPan2.chr20 62034638 37 + 62195757 GGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGCA i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=3165.000000 s hg38.chr20_KI270870v1_alt 23301 11 + 183433 CACCCTGATGT s panTro5.chr20 66355479 11 + 66533130 CACCCTGATGT i panTro5.chr20 T 98 C 0 s panPan2.chr20 62034675 11 + 62195757 CACCCTGATGT i panPan2.chr20 C 0 T 102 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=2646.000000 s hg38.chr20_KI270870v1_alt 23312 9 + 183433 TGGGGGGGT s panTro5.chr20 66355490 9 + 66533130 TGGGGGGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034584 9 + 62195757 TGGGGGGGT i panPan2.chr20 T 102 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339668 40 + 96509753 T a score=20201.000000 s hg38.chr20_KI270870v1_alt 23321 39 + 183433 GTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGAT s panTro5.chr20 66355499 39 + 66533130 GTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034593 39 + 62195757 GTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGAT i panPan2.chr20 C 0 C 0 s macFas5.chr10 96339628 39 + 96509753 GCCTGGGCAAAGCTGTGCGGGGCATGACTGCACCCTGAT i macFas5.chr10 T 40 T 38 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=300.000000 s hg38.chr20_KI270870v1_alt 23360 1 + 183433 G s panTro5.chr20 66355538 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034632 1 + 62195757 G i panPan2.chr20 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 38 + 96509753 T a score=11545.000000 s hg38.chr20_KI270870v1_alt 23361 52 + 183433 TGGGGGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGGGTACCCTGATGT s panTro5.chr20 66355539 48 + 66533130 T---GGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034634 52 + 62195757 TGGGGGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT i panPan2.chr20 I 1 T 149 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 38 + 96509753 T a score=4722.000000 s hg38.chr20_KI270870v1_alt 23413 51 + 183433 TGGGGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT s panTro5.chr20 66355587 51 + 66533130 TGGGGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGCGCACCCTGATGT i panTro5.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034686 149 + 62195757 T e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 38 + 96509753 T a score=665.000000 s hg38.chr20_KI270870v1_alt 23464 7 + 183433 TGGGGG---G s panTro5.chr20 66355638 10 + 66533130 TGGGGGGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034537 7 + 62195757 TGGGTG---G i panPan2.chr20 T 149 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 38 + 96509753 T a score=22338.000000 s hg38.chr20_KI270870v1_alt 23471 48 + 183433 TCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTGGGGGGGG s panTro5.chr20 66355648 47 + 66533130 TCTGGGCAAAGCTGTGCGGGGCATGAGCGCACCCTGATGTGGGGGGG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034544 48 + 62195757 CCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTTGGGGGGG i panPan2.chr20 C 0 C 0 s macFas5.chr10 96339629 48 + 96509753 CCTGGGCAAAGCTGTGCGGGGCATGACTGCACCCTGATGGGTGGGGGG i macFas5.chr10 T 38 T 48 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=10970.000000 s hg38.chr20_KI270870v1_alt 23519 42 + 183433 TGTCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT s panTro5.chr20 66355695 41 + 66533130 -GCCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034592 42 + 62195757 TGTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATGT i panPan2.chr20 C 0 T 96 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 48 + 96509753 T a score=100.000000 s hg38.chr20_KI270870v1_alt 23561 1 + 183433 G s panTro5.chr20 66355736 1 + 66533130 G i panTro5.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034634 96 + 62195757 T e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 48 + 96509753 T a score=512.000000 s hg38.chr20_KI270870v1_alt 23562 6 + 183433 GGGGG-G s panTro5.chr20 66355737 7 + 66533130 GGGGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034538 6 + 62195757 GGGTG-G i panPan2.chr20 T 96 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 48 + 96509753 T a score=22915.000000 s hg38.chr20_KI270870v1_alt 23568 48 + 183433 TCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT--GGGGGGGG s panTro5.chr20 66355744 50 + 66533130 TCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTGGGGGGGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034544 48 + 62195757 CCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT--TGGGGGGG i panPan2.chr20 C 0 C 0 s macFas5.chr10 96339629 48 + 96509753 CCTGGGCAAAGCTGTGCGGGGCATGACTGCACCCTGATGG--GTGGGGGG i macFas5.chr10 T 48 T 50 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=11458.000000 s hg38.chr20_KI270870v1_alt 23616 43 + 183433 TGTCTGGGCAAAGCTGTGCGGGGCATGAGGGTACCCTGATGTT s panTro5.chr20 66355794 43 + 66533130 TGTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034592 43 + 62195757 TGTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATGTT i panPan2.chr20 C 0 T 135 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=1764.000000 s hg38.chr20_KI270870v1_alt 23659 18 + 183433 GGGGGGGGTGTCTGGGCA s panTro5.chr20 66355837 18 + 66533130 GGGGGGGGTGTCTGGGCA i panTro5.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034635 135 + 62195757 T e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=6203.000000 s hg38.chr20_KI270870v1_alt 23677 37 + 183433 AAGCTGCGCGGGGCATGAGGGCACCCTGATGTgg--cgg s panTro5.chr20 66355855 39 + 66533130 AAGCTGTGCGGGGCATGAGCACACCCTGATGTGGGTCGG i panTro5.chr20 C 0 T 204 s panPan2.chr20 62034500 37 + 62195757 AAGCTGTGCTGGGCATGAGGGCACTCTGATGTGTGTG-- i panPan2.chr20 T 135 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=-114.000000 s hg38.chr20_KI270870v1_alt 23714 1 + 183433 g s panPan2.chr20 62034537 1 + 62195757 T i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355894 204 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=12300.000000 s hg38.chr20_KI270870v1_alt 23715 46 + 183433 ggggggcgtgggcgaagctgtgcggggcATGAGGGCACCCTGATGT s panTro5.chr20 66355690 46 + 66533130 GGGGGGCCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panTro5.chr20 T 204 I 100 s panPan2.chr20 62034538 46 + 62195757 GGGTGGCCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=873.000000 s hg38.chr20_KI270870v1_alt 23761 3 + 183433 TGG s panTro5.chr20 66355836 3 + 66533130 TGG i panTro5.chr20 I 100 C 0 s panPan2.chr20 62034584 3 + 62195757 TGG i panPan2.chr20 C 0 I 5 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=600.000000 s hg38.chr20_KI270870v1_alt 23764 6 + 183433 GGGGGG s panTro5.chr20 66355839 6 + 66533130 GGGGGG i panTro5.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034587 5 + 62195757 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=10950.000000 s hg38.chr20_KI270870v1_alt 23770 42 + 183433 TGTCTGGGCAAAGCTGCGCGGGGCATGAGGGCACCCTGATGT s panTro5.chr20 66355845 42 + 66533130 TGTCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGT i panTro5.chr20 C 0 T 449 s panPan2.chr20 62034592 42 + 62195757 TGTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATGT i panPan2.chr20 I 5 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=851.000000 s hg38.chr20_KI270870v1_alt 23812 10 + 183433 TGGGGGGGGG s panTro5.chr20 66355438 10 + 66533130 GTGTGTGGGT i panTro5.chr20 T 449 I 346 s panPan2.chr20 62034634 10 + 62195757 TGGGGGGGGG i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=10432.000000 s hg38.chr20_KI270870v1_alt 23822 44 + 183433 TGTCTGGGCAAAGCTGCGCGGGTCATGAGGGCACCCTGATATGG s panTro5.chr20 66355794 44 + 66533130 TGTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGATGTTG i panTro5.chr20 I 346 C 0 s panPan2.chr20 62034644 44 + 62195757 TGTCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGTGG i panPan2.chr20 C 0 T 101 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=4255.000000 s hg38.chr20_KI270870v1_alt 23866 51 + 183433 TGGGGGGTGTCTGGGCAAAGCTGTGCAGGGCATGAGGGCACCCTGATGTGG s panTro5.chr20 66355838 51 + 66533130 GGGGGGGTGTCTGGGCAAAGCTGTGCGGGGCATGAGCACACCCTGATGTGG i panTro5.chr20 C 0 T 441 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034688 101 + 62195757 T e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=0.000000 s hg38.chr20_KI270870v1_alt 23917 1 + 183433 C e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034688 101 + 62195757 T e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355889 441 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=500.000000 s hg38.chr20_KI270870v1_alt 23918 5 + 183433 GGGGG s panPan2.chr20 62034587 5 + 62195757 GGGGG i panPan2.chr20 T 101 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e panTro5.chr20 66355889 441 + 66533130 T e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339677 50 + 96509753 T a score=20186.000000 s hg38.chr20_KI270870v1_alt 23923 40 + 183433 GGCCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGAT s panTro5.chr20 66355448 40 + 66533130 GGCCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGAT i panTro5.chr20 T 441 C 0 s panPan2.chr20 62034592 40 + 62195757 TGTCTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGAT i panPan2.chr20 C 0 C 0 s macFas5.chr10 96339627 40 + 96509753 GGCCTGGGCAAAGCTGTGCGGGGCATGACTGCACCCTGAT i macFas5.chr10 T 50 T 39 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=573.000000 s hg38.chr20_KI270870v1_alt 23963 2 + 183433 GT s panTro5.chr20 66355488 2 + 66533130 GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034632 2 + 62195757 GT i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e manLeu1.NW_012101369v1 144225 207 + 156971 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 39 + 96509753 T a score=546.000000 s hg38.chr20_KI270870v1_alt 23965 1 + 183433 T s panTro5.chr20 66355490 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034634 1 + 62195757 T i panPan2.chr20 C 0 T 91 s manLeu1.NW_012101369v1 144018 1 + 156971 T i manLeu1.NW_012101369v1 T 207 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424345 172 - 578057 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 39 + 96509753 T a score=-69.000000 s hg38.chr20_KI270870v1_alt 23966 10 + 183433 GGGGG---GGGTG s panTro5.chr20 66355491 9 + 66533130 GGGGG---GG-TG i panTro5.chr20 C 0 C 0 s manLeu1.NW_012101369v1 144019 10 + 156971 GGGGGCCAGG--- i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034635 91 + 62195757 T e gorGor5.CYUI01015848v1 424345 172 - 578057 T e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 39 + 96509753 T a score=36500.000000 s hg38.chr20_KI270870v1_alt 23976 49 + 183433 TCTGGGCAAAGCTGTGCGGAGCATGAGGGCACCCTGATGTTGGGGGGGT- s panTro5.chr20 66355500 47 + 66533130 TCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGT--GGGGGGT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034544 49 + 62195757 CCTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGATGTTGGGGGGGT- i panPan2.chr20 T 91 C 0 s gorGor5.CYUI01015848v1 424173 49 - 578057 CCTGGGCAAAGCTGTGCAGGGCATGAGGGCACCCTGATGTGGGGGGGGT- i gorGor5.CYUI01015848v1 T 172 C 0 s manLeu1.NW_012101369v1 144029 50 + 156971 CCTGGGCAAAGCTGTGCGGGGCATGAGCCCACCCTGATGGGTGGGGGGGC i manLeu1.NW_012101369v1 C 0 I 2 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 39 + 96509753 T a score=1187.000000 s hg38.chr20_KI270870v1_alt 24025 2 + 183433 GT s panTro5.chr20 66355547 2 + 66533130 GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034593 2 + 62195757 GT i panPan2.chr20 C 0 C 0 s macFas5.chr10 96339628 2 + 96509753 GC i macFas5.chr10 T 39 C 0 s manLeu1.NW_012101369v1 144081 2 + 156971 GC i manLeu1.NW_012101369v1 I 2 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e chlSab2.chr2 90241903 5 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e gorGor5.CYUI01015848v1 424222 0 - 578057 C e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=67271.000000 s hg38.chr20_KI270870v1_alt 24027 37 + 183433 CTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGAT s panTro5.chr20 66355549 37 + 66533130 CTGGGCAAAGCTGTGCGGGGCATGAGGGCACCCTGAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034595 37 + 62195757 CTGGGCAAAGCTGTGCAGGGCATGAGCGCACCCTGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424222 37 - 578057 CTGGGCAAAGCTGTGTGGGGCATGAGGGCACCCTGAT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96339630 37 + 96509753 CTGGGCAAAGCTGTGCGGGGCATGACTGCACCCTGAT i macFas5.chr10 C 0 T 41 s chlSab2.chr2 90241908 37 - 90373283 CTGGGCAAAGCTGTGCAGGGCATGAGTGCACCCTGAT i chlSab2.chr2 I 5 C 0 s manLeu1.NW_012101369v1 144083 37 + 156971 CTGGGCAAAGCTGTGCGGGGCATGAGCCCACCCTGAT i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=1500.000000 s hg38.chr20_KI270870v1_alt 24064 1 + 183433 G s panTro5.chr20 66355586 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034632 1 + 62195757 G i panPan2.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 424259 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90241945 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144120 1 + 156971 G i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 41 + 96509753 T a score=27373.000000 s hg38.chr20_KI270870v1_alt 24065 30 + 183433 TGGGGG-GGGGT---GTCTGGGCAAAGCTGTGCG s panTro5.chr20 66355587 29 + 66533130 T-GGGG-GGGGT---GTCTGGGCAAAGCTGTGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034634 30 + 62195757 TGGGGG-GGGGT---GTCTGGGCAAAGCTGTGCG i panPan2.chr20 I 1 C 0 s gorGor5.CYUI01015848v1 424260 27 - 578057 ---TGG-GGGGG---GCCTGGGCAAAGCTGTGCG i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90241946 32 - 90373283 --GGGGAGGGGCCAGGCCTGGGCAAAGCTGTGCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144121 31 + 156971 --GGTG-GGGGCCAGGCCTGGGCAAAGCTGTGCG i manLeu1.NW_012101369v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e colAng1.NW_012114444v1 5492708 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 41 + 96509753 T a score=29310.000000 s hg38.chr20_KI270870v1_alt 24095 24 + 183433 GGGCATGAGGGCACCCTGATGTGG s panTro5.chr20 66355616 24 + 66533130 GGGCATGAGCGCACCCTGATGTTG i panTro5.chr20 C 0 I 95 s panPan2.chr20 62034664 23 + 62195757 GGGCATGAGCACACCCTGATGTG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424287 24 - 578057 GGGCATGAGCACACCCTGATGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90241978 23 - 90373283 GGGCATGAGTGCACCCTGATGGG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144152 23 + 156971 GGGCATGAGCCCACCCTGATGGG- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492708 21 - 5823884 GGGCATGAGCCCACCCTGA--GG- i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 41 + 96509753 T a score=5480.000000 s hg38.chr20_KI270870v1_alt 24119 6 + 183433 TGGGGA s panTro5.chr20 66355735 6 + 66533130 TGGGGG i panTro5.chr20 I 95 C 0 s gorGor5.CYUI01015848v1 424311 4 - 578057 --GGGG i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90242001 6 - 90373283 GGAGGG i chlSab2.chr2 C 0 I 3 s manLeu1.NW_012101369v1 144175 6 + 156971 TGGGGG i manLeu1.NW_012101369v1 C 0 I 2 s colAng1.NW_012114444v1 5492729 6 - 5823884 TGGGGG i colAng1.NW_012114444v1 C 0 I 3 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034687 0 + 62195757 C e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I e macFas5.chr10 96339667 41 + 96509753 T a score=52954.000000 s hg38.chr20_KI270870v1_alt 24125 29 + 183433 GGGCCTGGGCAAAGCTGTGTGGGGCATGA s panTro5.chr20 66355741 29 + 66533130 GTGTCTGGGCAAAGCTGTGCGGGGCATGA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424315 29 - 578057 GGGCCTGGGCAAAGCTGTGCGGGGCATGA i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96339626 29 + 96509753 GGGCCTGGGCAAAGCTGTGCGGGGCATGA i macFas5.chr10 T 41 C 0 s chlSab2.chr2 90242010 29 - 90373283 GGGCCTGGGCAAAGCTGTGCAGGGCATGA i chlSab2.chr2 I 3 C 0 s manLeu1.NW_012101369v1 144183 29 + 156971 AGGCCTGGGCAAAGCTGTGCGGGGCATGA i manLeu1.NW_012101369v1 I 2 C 0 s colAng1.NW_012114444v1 5492738 29 - 5823884 AGTCCTGGGCAAAGCTGTGCGGGGCATGA i colAng1.NW_012114444v1 I 3 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e panPan2.chr20 62034687 0 + 62195757 C e saiBol1.JH378156 16207754 0 + 16356641 C e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e calJac3.chr5 58142830 0 + 159171411 C e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=13955.000000 s hg38.chr20_KI270870v1_alt 24154 15 + 183433 GGGCACCCTGATGTC s panTro5.chr20 66355770 15 + 66533130 GGGCACCCTGATGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034687 4 + 62195757 -----------GGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424344 15 - 578057 GCACACCCTGATGTG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96339655 13 + 96509753 CTGCACCCTGATG-- i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90242039 13 - 90373283 GTGCACCCTGATT-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144212 13 + 156971 GCCCACCCTGATG-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492767 13 - 5823884 GTGCACCCTGATG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142830 14 + 159171411 GGCCACCCCGATGT- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16207754 14 + 16356641 GGCCACCCCGATGT- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e cerAty1.NW_012001373v1 3618545 0 - 3785965 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e macNem1.NW_012014244v1 16811302 0 - 16982598 C e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e rheMac8.chr10 92677219 0 - 92844088 C e otoGar3.GL873542 22773599 3 + 22939663 I a score=-4959.000000 s hg38.chr20_KI270870v1_alt 24169 4 + 183433 -GGGA s panTro5.chr20 66355785 4 + 66533130 -GGGG i panTro5.chr20 C 0 I 105 s panPan2.chr20 62034691 2 + 62195757 -GG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424359 4 - 578057 -GGTT i gorGor5.CYUI01015848v1 C 0 I 1 s rheMac8.chr10 92677219 4 - 92844088 -GGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339668 4 + 96509753 -GGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811302 4 - 16982598 -GGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618545 4 - 3785965 -GGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242052 4 - 90373283 -GGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144225 4 + 156971 -GGTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492780 3 - 5823884 --GGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142844 3 + 159171411 GGG-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16207768 3 + 16356641 GGG-- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=42193.000000 s hg38.chr20_KI270870v1_alt 24173 8 + 183433 GGGGGGCA s panTro5.chr20 66355894 8 + 66533130 GGGGGGCA i panTro5.chr20 I 105 C 0 s panPan2.chr20 62034693 8 + 62195757 GGGGGGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424364 8 - 578057 CGGGGGCA i gorGor5.CYUI01015848v1 I 1 C 0 s rheMac8.chr10 92677223 8 - 92844088 GGGGGGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339672 8 + 96509753 GGGGGGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811306 8 - 16982598 GGGGGGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618549 8 - 3785965 GGGGGGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242056 8 - 90373283 AGGGGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144229 8 + 156971 GGGGGGCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492783 8 - 5823884 GGGGGGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142847 8 + 159171411 AGGGGCCG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16207771 8 + 16356641 AGGGGCTG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e cebCap1.NW_016107870v1 1069932 26 + 1231380 I e aotNan1.NW_018500483v1 2608895 66 + 11732439 I e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=1210250.000000 s hg38.chr20_KI270870v1_alt 24181 154 + 183433 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCCTCCAGCATGGCTGGGCCCCAT-CCCACCTCACTTCCTTCCATCTCCACCTTTGCCGACTCCTGGGATCTGAGCCTCCTCCTGGTCTGTCTCTGGTTCtgaatgcctcctatgtgccgggtg s panTro5.chr20 66355902 154 + 66533130 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCTTCCAGCATGGCTGGGCCCCAT-CCCACCTCACTTCCTTCCATCTCCACCTTTGCCGACTCCTGGGATCTGAGCCTCCTCCTGGTCTGTCTCTGGTTCtgaatgcctcctatgtgccgggtg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034701 154 + 62195757 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCTTCCAGCATGGCTGGGCCCCAT-CCCACCTCACTTCCTTCCATCTCCACCTTTGCCGACTCCTGGGATCTGAGCCTCCTCCTGGTCTGTCTCTGGTTCtgaatgcctcctatgtgccgggtg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424372 154 - 578057 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCCTCCAGCATGGCTGGGCCCCAT-CCCACCTCACTTCCTTCCATCTCCACCTTTGCCGACTCCTGGGATCTGAGCCTCCTCCTGGTCTGTCTCTGGTTCtgaatgcctcctgtgtgccgggtg i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92677231 155 - 92844088 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCCTCCAGCACGGCTGGGCCCCATCCCCACCTCACTTCCTTCCATCTCCACCTTTGCCGACTCCGGGGATCTGAGCCTCCTCCTGGTCTATCTCTGGTTCtgaatacctcctgtgtgccgggtg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339680 155 + 96509753 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCCTCCAGCACGGCTGGGCCCCATCCCCACTTCACTTCCTTCCATCTCCACCTTTGCCGACTCCGGGGATCTGAGCCTCCTCCTGGTCTATCTCTGGTTCtgaatacctcctgtgtgccggatg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811314 155 - 16982598 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCCTCCAGCACGGCTGGGCCCCATCCCCACCTCACTTCCTTCCATCTCCACCTTTGCCGACTCCGGGGATCTGAGCCTCCTCCTGGTCTATCTCTGGTTCtgaatacctcctgtgtgccgggtg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618557 155 - 3785965 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCCTCCAGCACGGCTGGGCCCCATCCCCACCTCACTTCCTTCCATCTCCACCTTTGCCGACTCCGGGGATCTGAGCCTCCTCCTGGTCTATCTCTGGTTCtgaatacctcctgtgtgccgggtg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242064 155 - 90373283 GGCCTAGGCTCAGCCAGAAGACAGCCCCAGTTCCTCCAGCATGGCTGGGCCCCATCCCCACCTCACTTCCTTCCATCTCCACCTTTGCCAACTCCGGGGATCTGAGCCTCCTCCTGGTCTATCTCTGGTTCtgaatacctcctgtgtgccaggtg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144237 155 + 156971 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCCTCCAGCATGGCTGGGCCCCATCCCCACCCCACTTCCTTCCATCTCCACCTTTGCCGACTCCGGGGATCTGAGCCTCCTCCTGGTCTATCGCTGGTTCtgaatacctcctgtgtgccgggtg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492791 134 - 5823884 GGCCTGGGCTCAGCCAGAAGACAGCCCCAGTTCCTCCAGCATGGCTGGGCCCCATCCCCACTTCACTTCCTTCCGTCTCCACCTTTGCCGACTCCTGGGATCTGAGCCTCCTCCTGGTCTATCTCTGGTTCTGA--------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58142855 152 + 159171411 GGCCTGGGCTGGGCCAGAAGACAG-CCAGATTCCTCCAGCATGGCCGGGCTCCAT-CCTGCCTCCCCTCCTTCCATCTCT-ACTCTGCTGACTCCTGGGAGCTCAGCCTTCTTCTGGTCTATCTCTGGTTCtgtgtgcctcctctgtgccagatg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16207779 152 + 16356641 GGCCTCGGCTCAGCCAGAAGACGG-ACGGATTCCTCCAGCGTGGCTGGGCTCCAT-CCTGCGTCACCTCCTCCCATCTCC-CTTTTGCCAACTCCTGGGAGCGCAGGCTTCTTCTGGCCTGTCTCTGGTTCtgagtacctcctctgtgccaggtg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1069958 149 + 1231380 GGCCTGGGCTCAGCCAGAAGACAG-CCGGATTCCTCCAGCATGGCCGGGCTCCAT-CCTGTCTCACCTCCTTCCATCTCC-CCTTTGCCGACTCCTGGGAGCTCAGC---CTTCTGGCCTATCTCTGGTTCtgagtgcctcctctgtgccaggtg i cebCap1.NW_016107870v1 I 26 C 0 s aotNan1.NW_018500483v1 2608961 142 + 11732439 GGCCTGGGCTCAGCCAGAAGACAG-CCGGGTCCCTCCAGCATGGCCGGGCTCCAT-CCTGCCT----------CATCTCC-CCTTTGCCGGGTCCTGGGAGCTCAGCCTTCTTCTCATCTATCTCTGGTTCtgagtgcctcctctgtgccaggtg i aotNan1.NW_018500483v1 I 66 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e nomLeu3.chr13 109949623 102 - 110113093 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=3302354.000000 s hg38.chr20_KI270870v1_alt 24335 376 + 183433 ctgacagctaaagatacatccgtgtttcattttg-tctccacaatgg-ccaggg-gcagtactactgtcatcccatctagcagatgggaacaggaggctctgatggagttTCCCTGGAGCGTGCTTGCTAACCGTGGAGCAACAGGGCACTCAGCTTCCGCACGGAGCTTCCCAGAGCCTGTGGCTTCCTCT-CAGGGC-TCCGGCAGTGTTGAATGTGGGGAGCTCACACTCTCACCAGGGAGACCTCATACCTGCTGCTTATCACCTGGGAGATGTTTTCTGCCCACAGAGGCTCCG-TCACATCTCTGGCTGCTC--GGGGAGGTGAGTGGGGCCCTGCTCACTCAGGACAAAGGAGGCTGAGGTGGAGCTCTAGGCCCCT s panTro5.chr20 66356056 376 + 66533130 ctgacagctaaagatacatccgtgtttcattttg-tctccacaatgg-ccaggg-gcagtactactgtcatcccatctagcagatgggaacaggaggctctgacggagttTCCCTGGAGCGTGCTTGCTAACCGTGGAGCAACAGGGCGCTCAGCTTCCGCATGGAGCTTCCCAGAGCCTGTGGCTTCCTCT-CAGGGC-TCCGGTAGTGTTGGATGTGGGGAGCTCATACTCTCACCAGGGAGACCTCATACCTGCTGCTTATCACCTGGGAGATGTTTTCTGCCCACAGAGGCTCCG-TCACATCTCTGGCTGCTC--TGGGAGGTGAGCGGGGCCCTGCTCACTCAGGACAAAGGATGCTGAGGTGGAGCTCTAGGCCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62034855 376 + 62195757 ctgacagctaaagatacatccgtgtttcattttg-tctccacaatgg-ccaggg-gcagtactactgtcatcccatctagcagatgggaacaggaggctctgacggagttTCCCTGGAGCGTGCTTGCTAACCGTGGAGCAACAGGGCGCTCAGCTTCCGCATGGAGCTTCCCAGAGCCTGTGGCTTCCTCT-CAGGGC-TCCGGTAGTGTTGGATGTGGGGAGCTCATACTCTCACCAGGGAGACCTCATACCTGCTGCTTATCACCTGGGAGATGTTTTCTGCCCACAGAGGCTCCG-TCACATCTCTGGCTGCTC--TGGGAGGTGAGCGGGGCCCTGCTCACTCAGGACAAAGGATGCTGAGGTGGAGCTCTAGGCCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424526 376 - 578057 ctgacagctaaagatacatccgtgtttcattttg-tctccacaatga-ccaggg-gcagtactactgtcatcccatctagcagatgggaacaggaggctctgacggagttTCCCTGGAGCGTGCTTGCTAACCGTGGAGCAACAGGGCACTCAGCTTCCACATGGAGCTTCCCAGAGCCTGTGGCTTCCTCT-CAGGGC-TCCGGTAGTGTTGAATGTGGGGAGCTCACACTCTCACCAGGGAGACCTCATACCTGCTGCTTATCACCTGGGAGATGTTTTCTGCCCACAGAGACTCCG-TCACATCTCTGGCTGCTC--GGGGAGGTGAGTGGGGCCCTGCTCACTCAGGACAAAGCAGGCTGAGGTGGAGCTCTAGGCCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109949725 364 - 110113093 CCGACAGCTAAAGACACATCTGtgtttcattttg-ttcccacaatgacccaggg-gcagtactactgtcatcccatttagcagatgagaacaggaggctctgatggagttTCCCTGGAGCGCGCTTGCTAACCGTAGAGCAACGGGGCACTCAGCTTCTGCATGGAGCTTCCCAGAGCCTGTGGCTTCCTCTCCAGGGC-TCTGGTGGTGTTGAATGTGGGGAGCTCACACTCTCACCAGGGAGACCTCATACCTGTTGCTTATCACCTGGG-----------------AGAGTCTCCGTTCCCATCTCTGGCTGCTCAGGGGGAGGTAAGTGGGGCCCTGCTCACTCAGGACAAAGGAGGCTGAGCTGGAGCTCTAGGCCCCT i nomLeu3.chr13 I 102 C 0 s rheMac8.chr10 92677386 372 - 92844088 ctgacagctaaaaacacatctgtgtttcattttg-tccccacaatgacccagggagcagtacggccgtcatcccatttagcagatgagaacaggaggctctgatggagttTCCCTGGAGCGTGCTTAATAACCACAGAGCAGCGGGGCACTCAGCTTCCGCATGGAGCTCCCCAGAGCTTGTGGTGTCCTCTCCAGGAC-TCCGGTAGTGTCGAATGT-GGGGGCTCACACTCTCACCAGGGAGACC-CA-------TGCTTACCACCTGGGACGTGTTTTCTGCCCGCAGAGGCTCCGTCCGCATCTCTGGCTGCTCA-GGGGAGGTGAGTGGGGCCTTGCTCACTCAGGACAAAGGAGGCTGAGGTGGGGCTCTAGGCCCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96339835 372 + 96509753 ctgacagctaaaaacacatctgtgtttcattttg-tccccacaatgacccagggagcagtacggccgtcatcccatttagcagatgagaacaggaggctctgatggagttTCCCTGGAGCGTGCTTAATAACCACAGAGCAGCGGGGCACTCAGCTTCCGCATGGAGCTCCCCAGAGCTTGTGGTGTCCTCTCCAGGAC-TCCGGTAGTGTCGAATGT-GGGGGCTCACACTCTCACCAGGGAGACC-CA-------TGCTTACCACCTGGGACGTGTTTTCTGCCCGCAGAGGCTCCGTCCGCATCTCTGGCTGCTCA-GGGGAGGTGAGTGGGGCCTTGCTCACTCAGGACAAAGGAGGCTGAGGTGGGGCTCTAGGCCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811469 372 - 16982598 ctgacagctaaaaacacatctgtgtttcattttg-tccccacaatgacccagggagcagtacggccgtcatcccatttagcagatgagaacaggaggctctgaTGGCGTTTCCCTGGAGCGTGCTTAATAACCACAGAGCAGCGGGGCACTCAGCTTCCGCATGGAGCTCCCCAGAGCTTGTGGTGTCCTCTCCAGGAC-TCCGGTAGTGTCGAATGT-GGGGGCTCACACTCTCACCAGGGAGACC-CA-------TGCTTACCACCTGGGACGTGTTTTCTGCCCGCAGAGGCTCCGTCCGCATCTCTGGCTGCTCA-GGGGAGGTGAGTGGGGCCTTGCTCACTCAGGACAAAGGAGGCTGAGGTGGGGCTCTAGGCCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3618712 371 - 3785965 ctgacagctaaaaacacatctgtgtttcatttt--tccccacaacgacccagggagcagtacggccgtcatcccatttagcagatgagaacaggaggctctgatggagttTCCCTGGAGCGTGCTTAATAACCACAGAGCAGCGGGGCACTCAGCTTCCGCATGGAGCTCCCCAGAGCCTGTGGCGTCCTCTCCAGGAC-TCCGGTAGTGTCGAATGT-GGGGGCTCACACTCTCACCAGGGAGACC-CA-------TGCTTACCACCTGGGACGTGTTTTCTGCCCGCAGAGGCTCCGTCTGCATCTCTGGCTGCTCA-GGGGAGGTGAGTGGGGCCTTGCTCACTCAGGACAAAGGAGACTGAGGTGGGGCTCTAGGCCCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242219 373 - 90373283 ctgacagctaaaaacacatctgtgtctcattctg-tccccacaatgacccagggagcagtacagccgtcatcccatttagcagatgaggacaggaggctctgatggagttTCCCTGGAGTGTGCTTAATAACCACAGAGCAGCGGGGCACTCAGCTTCTGCATGGAGCTTCCCAGAGCCTGTGGTGTCCTCTCCAGGAC-TCCAGTAGTGTTGAATGTGGGGGGCTCACACTCTCACCAGGTAGACC-CA-------TGCTTATCACCTGGGACGTGTTTTCCGCCAGCAGAGGCTCCGTCCGCATCTCTGGCTGCTCA-GGGGAGGTGAGTGGGGCCTTGCTCGCTCAGGACAAAGGAGGCTGAGGTGGGGCTCTAGGCCCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144392 372 + 156971 ctgacagctaaaaacacatctgtgtttaattttg-tccccacaatgacccagggagcagtacagccgtcatcccatttagcagatgagaacaggaggctctgatggagttTCCCTGGAGCGTGCTTAATAACCACAGAGCAGCGGGGCACTCAGCTTCCGCATGGAGCTCCCCAGAGCCTGTGGCGTCCTCTCCAGGAC-TCCGGCAGTGTCGAATGT-GGGGGCTCACACTCTCACCAGGGAGACC-CA-------TGCTTACCACCTGGGACGTGTTTTCTGCCCGCAGAGGCTCCGTCTGCATCTCTGGCTGCTCA-GGGGAGGTGAGTGGGGCCTTGCTCACTCAGGACAAAGGAGACTGAGGTGGGGCTCTAGGCCCCT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5492925 357 - 5823884 -----------------ATCTGtgtttcattttg-tccccacaatgacccagggagcagtacgaccgtcatcccatttagcagatgagaacaggaggctctgatggagttTCCCTGGAGTGTGCTTAATAACCACAGAGCAGCGGGGCACTCAGCTTCCGCGTGGAGCTTCCCAGAGCCTGTGGAGTCCTCTCCAGGAC-TCCAGCAGTGTTGAATGTGGGGGGCCCACAATCTCACCAGGGAGACCTCA-------TACTTATCACCTGGGACGTGTTTTCTGCCCACAGAGGCTCCGTCCTCATCTCTCGCTGCTCA-GGGGAGGTGAGTGGGGCCTTGCTCACGCAGGACAAAGGAGGCTGAGGTGGGGCTCTAGGCCCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143007 378 + 159171411 ctgacagctaaaaacacatctgtgtttcgttttg-tctccacaatgaccca-gg-gcaatactaccgtcatctcatttagcagatgagaacaggagactctgatggagttTCCCTGGAGTGTGCTTGCTAACC-TAGAGCAACGGGACACTCCGCTTCCTCATGGAGCTTCCCGGAGCCTGTGGCTTCCTCTCCAGGGGCTCTCGTAGTGTCGAGTATGAGGAGCTCATGCTCTCACCAGGGACACCTTGTACCTGCTGCTTGTCACCTGGGGGATGTTTCCTGCCTGCAGAGATGCCATCCAC--GTCTGGCTGCTCAGGGGGAGATGAGTGGGGCCCTGCTCACTCGGGACAAAGGAGGCTGAGGAGGAGCTCTAGGCCCCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16207931 377 + 16356641 ctgacagctaaaaacacatctgcatttccttctg-tccccacaatgacccaggg-gcagtactaccgtcatcccatttagcagatgagaacaggagg--ctGCTGGAGTTTCCCTGGCGTGCGCTTGCTAACC-TAGAACAACGGGGCATTCCGCTTCCTCATGGAGCTCCCCAGAGCCTGTGGCTTCCTCTCCAGGGG-TCTTGTAGTGTCGAG-ATGAGGAGCTCACACTCTCACCAGGGAGACCTCGTACCTGCTGCTTGTCACCTGGGGGATGTTTCCTGCTTGCAGAGACTCCATCCGCATATCTGGCTGCTCAGGGGGAGGTGAGTGCGGCCCTGCTCACTCAGGACAAAGGAGGCTGAGGAGGAGCTCTAGGCCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1070107 377 + 1231380 ctgacagctaaaaacacatctgcatttcgttctg-tccccacaatgacccaggg-gcagtactactgtcatcccatttagcagatgagaacaggaggctcTGCTGGAGTTTCCCTGGAGTGTGC-TGCTAACC-TAGAGCAACAGGGCACTCCGCTTCCGCATGGAGCTTCCCAGAGCCTGTGGCTTCCTCTCCAGGGG-TCTCATAGTGTTGAGTATGAGGAGCTCACGCTCTCACCAGGGAGACCTCGTACCTGCTGCTTGTCACCTGGGGGATGTTTCCTGCCTGCAGAGA--CCATCCACGTGTCTGGCTGCTCAGGGGGAGGTGAGTGCGGCCCTGCTCACTCAGGACAAAGGAGGCTGAGGAGGAGCTCTAGGCCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2609103 381 + 11732439 ctgacagctaaaaacacatctgtgtttcgttttgatgcccacaatgacccaggg-gcagtactacca-catcccatttagcagatgagaacaggaggctctgatggagttTCCCTGGAGGGTGCTTGCTAACC-TAGAGCAACGGGGCACTCCGCTTCCGCATGGAGCTTCCCAGAGCCTGCGGCTTCCTCTCCGGGGGCTCTGGTGGTGTCGAGTATGAGGAGCTCACGCTCTCACCAGGAAGACCTCGAACCTGCTGCTTGTCACCTGGGGGACGTTTCCTGCCTGCAGAGACTCCATCCACATGTCTGGCTGCTCAGGGGGAGGTGAGTGCAGCCCTGCTCACTCAGGACAACGGAGGCCGAGGAGGAGCTCTAGGGCCCT i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I e otoGar3.GL873542 22773599 3 + 22939663 I a score=1273431.000000 s hg38.chr20_KI270870v1_alt 24711 133 + 183433 CTTCCCCACCCACTTGAGTGCACCCCGAAGGCACGTGGAGTTCCTGGGGTGCTGCCTGTGGTCGGG--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATAGGTATGTGGCCTGGGGACTGTTGCCGTGGAAC s panTro5.chr20 66356432 133 + 66533130 CTTCCCCACCCACTTGAGTGCACCCCGAAGGCACGTGGAGTTCCTGGGGTGCTGCCTGTGGTCGGG--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATAGGTATGTGGCCTGGGGACTGTTGCCGTGGAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035231 133 + 62195757 CTTCCCCACCCACTTGAGTGCACCCCGAAGGCACGTGGAGTTCCTGGGGTGCTGCCTGTGGTCGGG--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATAGGTATGTGGCCTGGGGACTGTTGCCGTGGAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 424902 133 - 578057 CTTCCCCACCCACTTGAGTGTACCCCGAAGGCATGTGGAGTTCCTGGGGTGCTGCCTGTGGTCAGG--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATAGGTATGTGGCCTGGGGACTGTTGCCGTGGAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950089 131 - 110113093 CTTCCCCACCCACTGGAGTGCACCCCAAAGGCACATGGAGCCCCTGGGGTGCTGCCTGTGGTTGGG--CCAGAGACTGTTCCACTGTCCAAGCTGTGCTCAT--GTATGTGGCCTGGGGACTGTTGCAGTGGAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92677758 133 - 92844088 CTTCCCCGCCCACTTGAGTGCACCCCAAAGGCACATGGAGCCCCTGGGGTGCTGCCTGTGGTCAGG--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATGGGGATACGGCCTGGGGACTGTTACAGTGGAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96340207 133 + 96509753 CTTCCCCGCCCACTTGAGTGCACCCCAAAGGCACATGGAGCCCCTGGGGTGCTGCCTGTGGTCAGG--CCAGAGACTGCTCCACCGTCCAAACTGTGCTCATGGGGATACGGCCTGGGGACTGTTACAGTGGAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811841 133 - 16982598 CTTCCCCGCCCACTTGAGTGCACCCCAAAGGCACATGGAGCCCCTGGGGTGCTGCCTGTGGTCAGG--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATGGGGATACGGCCTGGGGACTGTTACAGTGGAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3619083 133 - 3785965 CTTCCCCGCCCACTTGAGTGCACCCCAAAGGCACATGGAGCCCCTGGGGTGCTGCCTGTGGTCAGG--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATGGGGATACAGCCTGAGGACTGTTACAGTGGAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242592 133 - 90373283 CTTCCCCGCCCACTTGAGTGCACTCCAAAGGCACATGGAGCCCCTGGGGTGCTGCCTGTGGTCAGG--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATGGGGATACGGCCTGGGGACTGTTACAGTGGAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144764 133 + 156971 CTTCCCCGCCCACTTGAGTGCACCCCAAAGGCACATGGAGCCCCTGGGGTGCTGCCTGTGGTCAGG--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATGGGGACACAGCCTGAGGACTGTTACAGTGGAAC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5493282 133 - 5823884 CTTCCCCGCCCACTTGAGTGCACCCCAAAGGCACGTGGAGCCCCTGGGGTGCTGCCTGTGGTCAGC--CCAGAGACTGCTCCACTGTCCAAACTGTGCTCATGGGGATACGGCCTGGGGACTGTGACAGTGGAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143385 131 + 159171411 CTTGCCCACCCACTTGAGTGTACCCCAAAGGCACATGGGGCCCCTGGGGTGCTGCCTGTGGCTGGG--CCAGAGACGGTACCACTGCACAAGCTGTGCTCAT-GGCATGTGGCCAGGGGCCTGTTGCAGT-GAAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16208308 131 + 16356641 CTTGCCCACCCACTTGAGTGTACCCCAAAGGCACATGGGGCCCCTGGGGTGCTGCCTGTGGCTGGG--CCAGAGACGGCACCACTGCACAAGCTGTGCTCAT-GGCATGTGGCCAGGGGCCTGTTGCAGT-GAAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1070484 131 + 1231380 CTTGCCCGCCTACTTGAGTGTACCCTAAATGCACATGGGGCCCCTGGGGTGCTGCCTGTGGCTGGG--CCAGAGACGACACCGCTGCACAAGCTGTGCTCAT-GCCATGTGGCCAGTGGCCTGCTGCAGT-GAAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2609484 131 + 11732439 GCTGCCCGCCCACTTGAGTGTACCCCAAAGGCACATGGGGCCCCTGGGGTGCTGCCTGTGGCTGGG--CCAGAGATGGCACCACTGCACAAGCTGTGCTCAT-GGCATGTGGCCAGGGGCCTGTTGCAGT-GAAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22773602 119 + 22939663 CCTGCCTGCCTGTCTGGGTGAGCCCAGAGGGCACCTGAAGGT----GGGTGCTGCCTGTGACTTGGGCCCAGAGGCTGCTTCACAGTAT-AGTGGTGCTTAC-TGCATGTGGCTGAAGGTCTGGT---------- i otoGar3.GL873542 I 3 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 182567 607 - 397369 I a score=1294497.000000 s hg38.chr20_KI270870v1_alt 24844 137 + 183433 C-GGGTAAAGAGCCCTG----TGGACCTGTGCTCCCAACTCAGGCCAGTCAagggtgccactgtggcctagata--gtctcctgaggggagcagaccaggtggaggtcaggagtacaggtctgggactggctttttccttgctg s panTro5.chr20 66356565 137 + 66533130 C-GGGTAAAGAGCCCTG----TGGACCTGTGCTCCCGACTCAGGCCAGTCAagggtgccactgtggcctagata--gtctcctgaggggagcagaccaggtggaggtcaggagtacaggtctgggactggctttttccttgctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035364 137 + 62195757 C-GGGTAAAGAGCCCTG----TGGACCTGTGCTCCCGACTCAGGCCAGTCAagggtgccactgtggcctagata--gtctcctgaggggagcagaccaggtggaggtcaggagtacaggtctgggactggctttttccttgctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425035 137 - 578057 C-GGGTAAAGAGCCCTG----TGGACCTGTGCTCCCGACTCAGGCCAGTCAagggtgccactgtggcctagata--gtctcctgaagggagcagaccaggtggaggtcaggagtacaggtctgggactggctttttccttgctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950220 138 - 110113093 CTGGGTAAAGAGCCCTG----CGGACCTGTGCTCCAGACTCAGGCCAGGTAAGGATGCCATTGTGGCCTAGACA--GTCTCctgaggggagcagaccagggggaggtcaggagtacaggtctgggactggcttttgccttgctg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92677891 134 - 92844088 CTGGGTAAAGAGCCCTG----TGGACCTGTGCTCCAGATTCAGGC----CAGGGATGCCATCATGGCCTAGACA--GTCTCctgaggggagcagaccaggtggaggtcaggactacaggtctgggactggctttttccttgctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96340340 134 + 96509753 CTGGGTAAAGAGCCCTG----TGGACCTGTGCTCCAGATTCAGGC----CAGGGATGCCATCATGGCCTAGACA--GTCTCctgaggggagcagaccaggtggaggtcaggactacaggtctgggactggctttttccttgctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16811974 138 - 16982598 CTGGGTAAAGAGCCCTG----TGGACCTGTGCTCCAGATTCAGGCCAGTCAGGGATGCCATCATGGCCTAGACA--GTCTCctgaggggagcagaccaggtggaggtcaggactacaggtctgggactggctttttccttgctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3619216 138 - 3785965 CTGGGTAAAGAGCCCTG----TGGACCTGTGCTCCAGATTCAGGCCAGTCAGGGATGCCATCGTGGCCTAGACA--GTCTCctgaggggagcagaccaggtggaggtcaggactacaggtctgggactggctttttccttgctg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242725 129 - 90373283 CTGGGTAAAGAGCTCTG----TGGACCTGTGCTCCAGATTCAGGCCAGTCAAGGATGCCATCGTGGCCtaga-----------aaggggaacagacaaggtggaggtcaggactacaggtctgggactggctttttccttgctg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 144897 138 + 156971 CTGGGTGAAGAGCCCTG----TGGACCTGTGCTCCAGATTCAGGCCAGTCAGGGATGCCATCGTGGCCTAGACA--GTCTCctgaggggagcagaccaggcggaggtcaggactacaggtctgggactggctttttccttgctg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5493415 138 - 5823884 CCGGGTAAAGAGCCCTG----TGGACCTGTGCTCCAGATTCAGGCCAGTCAAGGGTGCCATAGTGGCCTAGACA--GTCTCctgaggggagcagaccaggtggaggtcaggagtacaggtctgggactggctttttccttgctg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143516 116 + 159171411 CTGGGTAAAGAGC-CTG----TGGACCTGTGTG---------------TCAAGGAGGTCACTGTGGCCTGGACA--GTCTCCTga-gggagcagaccagcaagaggccagg-----aggtctgggattggcttttttcttgctg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16208439 131 + 16356641 CTAGGTAAAGAGC-CTG----TGGACCTGTGCTCCAGATCTGGGCTGCTCAAGGAGGCCACGGTGGCCTGGACG--CTCTCCTga-gggagcagaccaggtggaggccagg-----aggtctgggattggcttttttcttgctg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1070615 111 + 1231380 CTGGGTAAAGAGC-CTG----TGGACCTGT--------------------AAGGAGGCCACTGTGGCCTGGACA--GCCTCCTga-gggagcagaccaggtggaggccagg-----aggtctgggatgggcttttttcttgctg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2609615 131 + 11732439 CTGGGTAAAGAGC-CTG----TGGCCCTGTGCTCCAGACCCGGGCCGGTCAAGGAGGCCACTGTGGCCTGGACA--GTCTCCTga-gggagcagaccaggtgaaggccagg-----aggtctgggattagcttttttcttgctg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22773721 122 + 22939663 -------AGGAACCCTA----TGGATCTGTGCTCCAGATCTGGGTTGGCTGAAGATGCCATCATGGCTTAGACACTATGttctgaggaaagcagac-----------taggaatgcagggctggaggtgcctctacccttgctg i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 183174 136 - 397369 -CGGGCAGGGCCCACTGCACCTGGGCCTGTGCTCCAGACCT-GGCCGGCCAAGGGTGCC-TTGTGCCCTG---A--GTTTCCTGGGGGAGGCAGACCAGGGGTGGCTCCGGGGGACAGGTCTGGAGGTGGCTCCATCCTCGCtg i dasNov3.JH569290 I 607 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47544596 444 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I a score=891206.000000 s hg38.chr20_KI270870v1_alt 24981 81 + 183433 tgtggcccagggtgagttacccaacctctctgagcctctgtctcctcacttgtcaaatgggg--atcgtaattttcctgcctc s panTro5.chr20 66356702 81 + 66533130 tgtggcccagggtgagttacccaacctctctgagcctctgtcttctcacttgtcaaatgggg--atcataattttcctgcctC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035501 81 + 62195757 tgtggcccagggtgagttacccaacctctctgagcctctgtcttctcacttgtcaaatgggg--atcataattttcctgcctc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425172 81 - 578057 tgtggcccagggtgagttacccaacctctctgagcctctgtctcctcacttgtcaagtgggg--atcataattttcctgcttc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950358 81 - 110113093 tgtggcccagggtgagttacccaacctctctgagcctctgtttcctcacttgtcaaatgggg--atcataattttcccgtctc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92678025 81 - 92844088 tgtggcccagggtgagttacccaacctctctgagcctccgcttcctcacttgtcaaatgggg--atcatcatttttctgtctc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96340474 81 + 96509753 tgtggcccagggtgagttacccaacctctctgagcctccgcttcctcacttgtcaaatgggg--atcatcatttttctgtctc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16812112 81 - 16982598 tgtggcccagggtgagttacccaacctctctgagcctccgcttcctcacttgtcaaatgggg--atcatcatttttctgtctc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3619354 81 - 3785965 tgtggcccagggtgagttacccaacctctctgagcctccgcttcctcacttgtcaaatgggg--atcatcattttcctgtctc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242854 81 - 90373283 tgtggcccagggtgagttacccaacctctctgagcctccgcttcctcacttgtcaaatgggg--atcctcattttcctgtctC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 145035 81 + 156971 tgtggcccagggtgagttacccaacctctctgagcctccgcttcctcacttgtcaaatgggg--atcatcattttcctgtctc i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5493553 80 - 5823884 tgtggtccagggtgagttacccaacctctctgagcctctgcttcctcacttgt-aaatcggg--atcatcattttcctgtctC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143632 81 + 159171411 tgtggcccagggagagttactcaaccgctctgagcccctatttcctcacttgtcaaaggggg--atcataacttttctgcctt i calJac3.chr5 C 0 I 32 s saiBol1.JH378156 16208570 81 + 16356641 tgtggcccagggtgagttactcaacctctctgagcccctatttcctcactggtcaaatgggg--atcataatttttctgcctt i saiBol1.JH378156 C 0 I 32 s cebCap1.NW_016107870v1 1070726 81 + 1231380 tgtggcccagggtgagttactcaacctctctgagcccctatctcctcacttgtcaaatgggg--atcataatttttctgcctc i cebCap1.NW_016107870v1 C 0 I 65 s aotNan1.NW_018500483v1 2609746 81 + 11732439 tgtggcccagggtgagttactcaacctctctgagcccctatttcctcacttgtcaaatgggg--atcatcacttttctgcctc i aotNan1.NW_018500483v1 C 0 I 32 s otoGar3.GL873542 22773843 65 + 22939663 cgtgacccaatgtgagtcacccagactttctgagcctctgtgtccttaATGGTCA------------------TCCCTGCCTC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545040 58 + 47698779 TGTGACCCAGGGTGAGGT-CTCAGGCGCTCTGAGCC----------------------GGGG--GCCCCGCTTCTCCTGCCCT i canFam3.chr24 I 444 C 0 s dasNov3.JH569290 183310 73 - 397369 --tgacccaggacatgggacctgacctct----gatcctgtttcctcctctgtaagacagggtcgtccttgtctgcctg---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I a score=122998.000000 s hg38.chr20_KI270870v1_alt 25062 14 + 183433 aggctg--------------------------------g--------aggcttg s panTro5.chr20 66356783 14 + 66533130 AGGCTG--------------------------------G--------AGGCTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035582 14 + 62195757 aggctg--------------------------------g--------aggcttg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425253 14 - 578057 aggctg--------------------------------g--------aggcttg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950439 14 - 110113093 aggCTG--------------------------------G--------AGGCTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92678106 14 - 92844088 aggctg--------------------------------g--------aggcttg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96340555 14 + 96509753 aggctg--------------------------------g--------aggcttg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16812193 14 - 16982598 aggctg--------------------------------g--------aggcttg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3619435 14 - 3785965 aggctg--------------------------------g--------aggcttg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242935 14 - 90373283 AGGCTG--------------------------------G--------AGGCTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 145116 14 + 156971 aggctg--------------------------------g--------aggcttg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5493633 14 - 5823884 AGGCTG--------------------------------G--------AGGCTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143745 14 + 159171411 aggctg--------------------------------a--------gggcttg i calJac3.chr5 I 32 C 0 s saiBol1.JH378156 16208683 14 + 16356641 aggctg--------------------------------a--------gggcctg i saiBol1.JH378156 I 32 C 0 s aotNan1.NW_018500483v1 2609859 14 + 11732439 aggctg--------------------------------a--------gggcttg i aotNan1.NW_018500483v1 I 32 I 33 s otoGar3.GL873542 22773908 46 + 22939663 AGAGTGCAGAAGGGATTTGGTTTAGATGACAAACATACA--------AGGCCTG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545098 12 + 47698779 --GGTG--------------------------------G--------TGGCTGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183383 22 - 397369 agtgtg--------------------------------gcgatgattaGGCTGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e cebCap1.NW_016107870v1 1070807 65 + 1231380 I a score=52230.000000 s hg38.chr20_KI270870v1_alt 25076 10 + 183433 cacgtgttGG-- s panTro5.chr20 66356797 10 + 66533130 CACATGTTGG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035596 10 + 62195757 cacgtgttGG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425267 10 - 578057 cacgtgttGG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950453 10 - 110113093 CACATGTTGG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92678120 10 - 92844088 catgtgttgg-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96340569 10 + 96509753 catgtgttgg-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16812207 10 - 16982598 catgtgttgg-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3619449 10 - 3785965 cacgtgttgg-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242949 10 - 90373283 CACATGTTGG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 145130 10 + 156971 cacgggttgg-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5493647 10 - 5823884 CACATGTTGG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143759 5 + 159171411 -----gcTGC-- i calJac3.chr5 C 0 I 28 s saiBol1.JH378156 16208697 5 + 16356641 -----gcTGC-- i saiBol1.JH378156 C 0 I 15 s otoGar3.GL873542 22773954 10 + 22939663 TACATGTAGG-- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545110 10 + 47698779 TGCGGGCCGA-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183405 10 - 397369 --GACGCTGAGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e cebCap1.NW_016107870v1 1070807 65 + 1231380 I e aotNan1.NW_018500483v1 2609873 33 + 11732439 I a score=42754.000000 s hg38.chr20_KI270870v1_alt 25086 10 + 183433 GCC------------------AGCCCCA s panTro5.chr20 66356807 10 + 66533130 GCC------------------AGCCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035606 10 + 62195757 GCC------------------AGCCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425277 10 - 578057 GCC------------------AGCCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950463 28 - 110113093 GCCAGTGAGCAGTGCAGAGGGAGCCCCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92678130 28 - 92844088 gccagggtgcagcactgagGGGGCCCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96340579 28 + 96509753 gccagggtgcagcactgagGGGGCCCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16812217 28 - 16982598 gccagggtgcagcactgagGGGGCCCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3619459 28 - 3785965 gccagggtgcagcactgagGGAGCCCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242959 28 - 90373283 GTCAGGGTGCAGCACTGAGGGAGCCCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 145140 28 + 156971 gccagggtgcagcactgagGGAGCCCTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5493657 28 - 5823884 GCCAGGGTGCAGCACTGAGGGAGCCCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143792 14 + 159171411 --------------GCGAAGGGGCCCCA i calJac3.chr5 I 28 C 0 s saiBol1.JH378156 16208717 14 + 16356641 --------------GCGAAGGGGCCCCG i saiBol1.JH378156 I 15 C 0 s aotNan1.NW_018500483v1 2609906 10 + 11732439 --------------GCAAA----CCCCG i aotNan1.NW_018500483v1 I 33 C 0 s otoGar3.GL873542 22773964 10 + 22939663 ------------------GCGAGTGCTG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545120 15 + 47698779 ------------GGCTGGAAGGGCTCT- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183415 13 - 397369 GCCAGC---------------AGTGCCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e cebCap1.NW_016107870v1 1070807 65 + 1231380 I a score=1437037.000000 s hg38.chr20_KI270870v1_alt 25096 133 + 183433 -------TCTGAGG---TCCCACCTGCCCGTGCTGCTCTGGACCTGGTCTGGGGTTTCGGCCTTGGGCCTGGGCAGCTCAGGTGGATGCTTGGAGGGAGCACTG------ACCTCAAGTCAGCTGTGAGTAGGACGGGAGGCTGGTGA----G s panTro5.chr20 66356817 133 + 66533130 -------TCTGAGG---TCCCACCTGCCCATGCTGCTCTGGACCTGGTCTGGGGTTTCGGCCTTGGGCCTGGGCAGCTCAGGTGGATGCTTGGAGGGAGCACTG------ACCTCAAGTCAGCTGTGAGTAGGATGGGAGGCTGGTGA----G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035616 133 + 62195757 -------TCTGAGG---TCCCACCTGCCCATGCTGCTCTGGACCTGGTCTGGGGTTTCGGCCTTGGGCCTGGGCAGCTCAGGTGGATGCTTGGAGGGAGCACTG------ACCTCAAGTCAGCTGTGAGTAGGATGGGAGGCTGGTGA----G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425287 133 - 578057 -------TCTGAGG---TCCCACCTGCCCGTGCTGCTCTGGACCTGGTCTGGGGTTTCGGCCTTGGGCCTGGGCAGCTCAGGTGGATGCTTGGAGGGAGCACTG------ACCTCAAGTCAGCTGTGAGTAGGACGGGAGGCTGGTGA----G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950491 133 - 110113093 -------TCTGAGG---GCCCACCTGCCCGTGCTGCTCGGGACCTGGTCTGGGGTTTCGGCCTTGGGCCTGGGCAGCTCAGGTGGATGCTTGGAGGGAACACTG------ACCTCAAGTCAGCTGTGAATAGGACAGGAGACTGGTGA----G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92678158 133 - 92844088 -------TCTGAGG---TCCCACCTGCCCGCGCTGCCCTGGACCTGGTCTGGGGTTTCAGCCTTGGGCCTGGGCAGCTCAGGTGGACGCTTGGAGGGAACACTG------ACCTCAAGTTGGCTGTGAGTAGGACGAGAGGCTGGTGC----G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96340607 133 + 96509753 -------TCTGAGG---TCCCACCTGCCCGCACTGCCCTGGACCTGGTCTGGGGTTTCAGCCTTGGGCCTGGGCAGCTCAGGTGGACGCTTGGAGGGAACACTG------ACCTCAAGTTGGCTGTGAGTAGGACGAGAGGCTGGTGC----G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16812245 133 - 16982598 -------TCTGAGG---TCCCACCTGCCCGCGCTGCCCTGGACCTGGTCTGGGGTTTCAGCCTTGGGCCTGGGCAGCTCAGGTGGACGCTTGGAGGGAACACTG------ACCTCAAGTTGGCTGTGAGTAGGACGAGAGGCTGGTGC----G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3619487 133 - 3785965 -------TCTGAGG---TCCCACCTGCCCGCGCTGCTCTGGACCTGGTCTGGGGTTTCAGCCTTGGGCCTGGGCAGCTCAGGTGGATGCTTGGAGGGAACACTG------ACCTCAAGTCGGCTGTGAGTAGGACGAGAGGCTGGTGC----G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90242987 137 - 90373283 -------TCTGAGG---TCCCACCTGCCCGCGCTGCTCTGGACCTGGTCTGGGGTTTCAGCCTTGGGCCTGGGTAGCTCAGATGGACGCTTGGAGGGAAGACTG------AACTCAAGTCGGCTGTGAGTAGGACGGGAGGCTGGTGCGCGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 145168 133 + 156971 -------TCTGAGG---TCCCACCTGCCCGCGCTGCTCTGGACCTGGTCTGGGGTTTCAGCCTTGGGCCTGGGCAGCTCAGGTGGACGCTTGGAGGGGACACTG------ACCTCAAGTCGGCTGTGAGTAGGACGAGAGGCTGGTGC----G i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5493685 133 - 5823884 -------TCTGAGG---TCCCACCTGCCCGCGCTGCTCTGGACCTGGTCTGGGGTTTCAGCCTTGGGCCTGGGCAGCTCAGGTGGACGCTTGGCAGGAACACTG------ATCTCAAGTCGGCTGTGAGTAGGACGGGAGGCTGGTGC----G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143806 133 + 159171411 -------TCTGAGG---TCCCCCCTGCCCATGCTGCTCTGGACCTGGTCTGAGGTTTCAGCCTTGGGCCAGGGCAACTCAGGTGGGTGCTCGGAGGGAACACTG------ACCTCAAGTCGGGAGTCAGTAGGACAGGAGGCTGGTGA----G i calJac3.chr5 C 0 I 3 s saiBol1.JH378156 16208731 130 + 16356641 -------TCTGAGG---TACCCCC-GCCCATGCTGCTCTGGACCTGGCCCGGGGTTTCAGCCTTGGGCCAGGGCAGCTCAGGTGGGTGCTCGGAGGGAATGCCG------ACCTCAAGTCGGGCGTGCATAGGGCA-GAGGCTGGCGA----- i saiBol1.JH378156 C 0 I 3 s cebCap1.NW_016107870v1 1070872 131 + 1231380 -------TCTGAGG---TCCCCCC-GCCCATGCTGCTCTGGACCTGGCCTGCGGTTTCAGCCTTGGGCCGGGGCAGCTCAGGTGGGTGCTCGGAGGGAACACTG------ACCTCAAGTCGGGCGTGAGTAGGACA-GAGGCTGGTGA----G i cebCap1.NW_016107870v1 I 65 I 3 s aotNan1.NW_018500483v1 2609916 132 + 11732439 -------TCTGAGG---TCCCCCT-GCCCATGCTGCTCTGGGCCTGGCCTGGGGTTTCAGCCGTGGGCCAGGGCAGCTCAGGTGGGCGCTCGGAGGGAGCACTG------ACCTCAAGTCGGGTGTGAGTAGGACAGGAGGCTGGTGA----G i aotNan1.NW_018500483v1 C 0 I 103 s otoGar3.GL873542 22773974 125 + 22939663 ----------GAGGGAATCCCACCTACCCACTTCACTCTGGACTTGG-----GGTTTCAGCCTTGGGCCTGGGCAGCTCAGATAGGTGCCT-GAGTGAACAGCG------ACTTCAAATCAGCTAAAAG--AGACAGGGGAATGGTAA----G i otoGar3.GL873542 C 0 I 3 s canFam3.chr24 47545135 119 + 47698779 -------------G---CGCCCCTCGCCCGGGGCGCTCTGGGC-TGCTCTGGGGTTTCGGCCTGGGGTTCGGGCGACTCAGAGGGACGCCTGGAACCCATAGTG------GCCTCCTGTGAGCTGTGAGCAGGACGGGGAGC----------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183428 122 - 397369 GCTTGTGTCTGGGC---TCAGCCCATCCCAG-------CGGCCTGGGTCTTGGGTGT-AGCCTTGGGCCCAGGTAGCTCAGATGGACCCCC-GAGGGGCCGCTGGGTGGAGCCTCTGGCTAG---------------GAGACAGGGGA----G i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I a score=-21985.000000 s hg38.chr20_KI270870v1_alt 25229 6 + 183433 ---CGGCAG s panTro5.chr20 66356950 6 + 66533130 ---CGGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035749 6 + 62195757 ---CGGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425420 6 - 578057 ---CAGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950624 6 - 110113093 ---TGGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92678291 5 - 92844088 ---CGGC-G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96340740 5 + 96509753 ---CGGC-G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16812378 5 - 16982598 ---CCGC-G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3619620 5 - 3785965 ---CGGC-G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243124 5 - 90373283 ---CGGC-G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 145301 5 + 156971 ---CGGC-G i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5493818 5 - 5823884 ---CGGC-G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143942 3 + 159171411 ---CAG--- i calJac3.chr5 I 3 I 4 s saiBol1.JH378156 16208864 3 + 16356641 ---CTG--- i saiBol1.JH378156 I 3 I 4 s cebCap1.NW_016107870v1 1071006 3 + 1231380 ---CAG--- i cebCap1.NW_016107870v1 I 3 I 60 s otoGar3.GL873542 22774102 3 + 22939663 ---TAG--- i otoGar3.GL873542 I 3 C 0 s dasNov3.JH569290 183550 6 - 397369 GGCTGG--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545254 0 + 47698779 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e aotNan1.NW_018500483v1 2610048 103 + 11732439 I a score=243775.000000 s hg38.chr20_KI270870v1_alt 25235 32 + 183433 CAAGCTGCAAGCCACAGGCAGGGAGAACTTCC s panTro5.chr20 66356956 32 + 66533130 CAAGCTGCAAGCCACAGGCGGGGAGAACTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035755 32 + 62195757 CAAGCTGCAAGCCACAGGCGGGGAGAACTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425426 32 - 578057 CAAGCTGCAAGCCACAGGCAGGGAGAACTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950630 32 - 110113093 CGAGCTGCAAGCCACAGGCAGGGAGAACTTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92678296 32 - 92844088 CGAGCTGCAAGCTACAGGCAGGGAGAACTTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96340745 32 + 96509753 CGAGCTGCAAGCTACAGGCAGGGAGAACTTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16812383 32 - 16982598 CGAGCTGCAAGCTACAGGCAGGGAGAACTTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3619625 32 - 3785965 CGAGCTGCAAGCTACAGGCAGGGAGAACTTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243129 32 - 90373283 CGAGCTGCAAGCTACAGGCAGGGAGAACTTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 145306 32 + 156971 CGAGCTGCAAGTTACAGGCAGGGAGAACTTCC i manLeu1.NW_012101369v1 C 0 M 6575 s colAng1.NW_012114444v1 5493823 32 - 5823884 CGAGCTGCAAGCCACAGGCAGGGAGAACTTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143949 32 + 159171411 CCAGCTGCAGGTCACAGGCCAGGAGAACTGCG i calJac3.chr5 I 4 I 1 s saiBol1.JH378156 16208871 31 + 16356641 CAGGCTGCAGGTCACAGGCC-GGGGAACCGCG i saiBol1.JH378156 I 4 I 1 s otoGar3.GL873542 22774105 20 + 22939663 ---GCTGCAG---------CGGGAGGACTTCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545254 15 + 47698779 ----------------GGCGGGGGGACCCTC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183556 31 - 397369 GGACCTGCAGG-GGCAGTGGGGGAGGGCTTCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e cebCap1.NW_016107870v1 1071009 60 + 1231380 I e aotNan1.NW_018500483v1 2610048 103 + 11732439 I a score=46528.000000 s hg38.chr20_KI270870v1_alt 25267 9 + 183433 CGGAGGTag s panTro5.chr20 66356988 9 + 66533130 CGGAGGTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035787 9 + 62195757 CGGAGGTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425458 9 - 578057 CGGAGGTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950662 9 - 110113093 CAGAGGTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92678328 9 - 92844088 CGGAGGTAG i rheMac8.chr10 C 0 I 1918 s macFas5.chr10 96340777 9 + 96509753 Cggaggtag i macFas5.chr10 C 0 I 23 s macNem1.NW_012014244v1 16812415 9 - 16982598 CGGAGGTAG i macNem1.NW_012014244v1 C 0 I 4301 s cerAty1.NW_012001373v1 3619657 9 - 3785965 TGGAGGTAG i cerAty1.NW_012001373v1 C 0 I 1834 s chlSab2.chr2 90243161 9 - 90373283 CGGAGGTGG i chlSab2.chr2 C 0 I 19 s colAng1.NW_012114444v1 5493855 9 - 5823884 CGGAGGTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143982 9 + 159171411 GGGAGGTGG i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16208903 8 + 16356641 GGGC-CCGG i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22774125 9 + 22939663 CAGAGGTAg i otoGar3.GL873542 C 0 I 2 s dasNov3.JH569290 183587 5 - 397369 TGGGG---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545269 0 + 47698779 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1071009 60 + 1231380 I e aotNan1.NW_018500483v1 2610048 103 + 11732439 I a score=-979.000000 s hg38.chr20_KI270870v1_alt 25276 4 + 183433 agag s panTro5.chr20 66356997 2 + 66533130 AG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035796 2 + 62195757 AG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425467 2 - 578057 AG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950671 2 - 110113093 AG-- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96340809 4 + 96509753 agag i macFas5.chr10 I 23 C 0 s chlSab2.chr2 90243189 4 - 90373283 agag i chlSab2.chr2 I 19 C 0 s otoGar3.GL873542 22774136 2 + 22939663 ag-- i otoGar3.GL873542 I 2 I 694 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545269 0 + 47698779 C e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e colAng1.NW_012114444v1 5493864 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183592 0 - 397369 C e manLeu1.NW_012101369v1 145338 6575 + 156971 M e saiBol1.JH378156 16208911 0 + 16356641 C e macNem1.NW_012014244v1 16812424 4301 - 16982598 I e cebCap1.NW_016107870v1 1071009 60 + 1231380 I e calJac3.chr5 58143991 0 + 159171411 C e aotNan1.NW_018500483v1 2610048 103 + 11732439 I e rheMac8.chr10 92678337 1918 - 92844088 I a score=-10326.000000 s hg38.chr20_KI270870v1_alt 25280 23 + 183433 agagagagagagagagagagaga s panTro5.chr20 66356999 2 + 66533130 ---------------------TA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035798 2 + 62195757 ---------------------TA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425469 2 - 578057 ---------------------TA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950673 2 - 110113093 ---------------------TA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96340813 23 + 96509753 agagagagggagagagagagaga i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90243193 23 - 90373283 agagagagagagggagagagaga i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5493864 18 - 5823884 -----TGGAGGGGGAGAGAGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58143991 17 + 159171411 ------AGAGAGAGAGAGAGATT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16208911 12 + 16356641 ------AGAG-----GAGAGATG i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47545269 13 + 47698779 ----------AGGGCGGGAGCAG i canFam3.chr24 C 0 I 2 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183592 0 - 397369 C e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16812424 4301 - 16982598 I e cebCap1.NW_016107870v1 1071009 60 + 1231380 I e aotNan1.NW_018500483v1 2610048 103 + 11732439 I e rheMac8.chr10 92678337 1918 - 92844088 I e otoGar3.GL873542 22774138 694 + 22939663 I a score=7076.000000 s hg38.chr20_KI270870v1_alt 25303 3 + 183433 gag s panTro5.chr20 66357001 3 + 66533130 GAg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035800 3 + 62195757 GAg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425471 3 - 578057 GAg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950675 3 - 110113093 GAg i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96340836 3 + 96509753 gag i macFas5.chr10 C 0 I 1513 s chlSab2.chr2 90243216 3 - 90373283 gag i chlSab2.chr2 C 0 I 64 s colAng1.NW_012114444v1 5493882 3 - 5823884 GAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144008 2 + 159171411 GA- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16208923 2 + 16356641 GA- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22774832 3 + 22939663 gag i otoGar3.GL873542 I 694 I 8 s canFam3.chr24 47545284 2 + 47698779 -AG i canFam3.chr24 I 2 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183592 0 - 397369 C e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16812424 4301 - 16982598 I e cebCap1.NW_016107870v1 1071009 60 + 1231380 I e aotNan1.NW_018500483v1 2610048 103 + 11732439 I e rheMac8.chr10 92678337 1918 - 92844088 I a score=17406.000000 s hg38.chr20_KI270870v1_alt 25306 40 + 183433 tgtgtgtg------tgtgtgtgtgtgtgtgtgtgtgtg------tgtgCGCC s panTro5.chr20 66357004 44 + 66533130 tgtgtgtg------tgtgtgtgtgtgtgtgtgtgCACG--CACACGTGCGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035803 46 + 62195757 tgtgtgtg------tgtgtgtgtgtgtgtgtgtgtgCACGCACACGTGCGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425474 46 - 578057 tgtgtgtg------tgtgtgtgtgtgtgtgtgtgtgCATGCGCACGTGTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950678 38 - 110113093 tgagtgtg------tgtgtgtgtgtgtgtgtg--------CCCGCGCGCGCC i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012114444v1 5493885 22 - 5823884 ----TGTG------TGCGTGCGCGCGCGCTTG-------------------- i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22774843 33 + 22939663 tgtaagtg------tgcacgtgtgtgtgtgtg-------------GTGAGCC i otoGar3.GL873542 I 8 C 0 s canFam3.chr24 47545287 37 + 47698779 TGCAGGTGGAGTCCTGCAGGTGGGTGCGCTGGGGGAT--------------- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 183592 15 - 397369 ---------------GGGCGTGGGTGGGCC---------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e chlSab2.chr2 90243219 64 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e saiBol1.JH378156 16208925 0 + 16356641 C e macNem1.NW_012014244v1 16812424 4301 - 16982598 I e cebCap1.NW_016107870v1 1071009 60 + 1231380 I e calJac3.chr5 58144010 0 + 159171411 C e aotNan1.NW_018500483v1 2610048 103 + 11732439 I e rheMac8.chr10 92678337 1918 - 92844088 I e macFas5.chr10 96340839 1513 + 96509753 I a score=5500.000000 s hg38.chr20_KI270870v1_alt 25346 1 + 183433 C s panTro5.chr20 66357048 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035849 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425520 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950716 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92680255 1 - 92844088 C i rheMac8.chr10 I 1918 C 0 s macNem1.NW_012014244v1 16816725 1 - 16982598 C i macNem1.NW_012014244v1 I 4301 C 0 s chlSab2.chr2 90243283 1 - 90373283 C i chlSab2.chr2 I 64 C 0 s colAng1.NW_012114444v1 5493907 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s canFam3.chr24 47545324 1 + 47698779 C i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183607 1 - 397369 C i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e saiBol1.JH378156 16208925 0 + 16356641 C e cebCap1.NW_016107870v1 1071009 60 + 1231380 I e calJac3.chr5 58144010 0 + 159171411 C e aotNan1.NW_018500483v1 2610048 103 + 11732439 I e otoGar3.GL873542 22774876 0 + 22939663 C e macFas5.chr10 96340839 1513 + 96509753 I a score=8281.000000 s hg38.chr20_KI270870v1_alt 25347 1 + 183433 T s panTro5.chr20 66357049 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035850 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425521 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950717 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92680256 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16816726 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90243284 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5493908 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144010 1 + 159171411 T i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16208925 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1071069 1 + 1231380 T i cebCap1.NW_016107870v1 I 60 C 0 s aotNan1.NW_018500483v1 2610151 1 + 11732439 T i aotNan1.NW_018500483v1 I 103 C 0 s canFam3.chr24 47545325 1 + 47698779 T i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183608 0 - 397369 C e manLeu1.NW_012101369v1 145338 6575 + 156971 M e otoGar3.GL873542 22774876 0 + 22939663 C e macFas5.chr10 96340839 1513 + 96509753 I a score=521077.000000 s hg38.chr20_KI270870v1_alt 25348 77 + 183433 TCTTAGCCTGGGCAAAGAATTGGGAGACCAGCAGGCCAGCG----CTGGCTCTGCCATG---GAGG--GGAAGCACTTTGAAGCCC s panTro5.chr20 66357050 77 + 66533130 TCTTAGCCTGGGCAAAGAATTGGGAGACCAGCAGTCCAGCG----CTGGCTCTGCCATG---GAGG--GGAAGCACTTTGAAGCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035851 77 + 62195757 TCTTAGCCTGGGCAAAGAATTGGGAGACCAGCAGTCCAGCG----CTGGCTCTGCCATG---GAGG--GGAAGCACTTTGAAGCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425522 77 - 578057 TCTTAGCCTGGGCAAAGAATTGGGAGACCAGCAGGCCAGCA----CTGGCTCTGCCATG---GAGG--GGAAGCACTTTGAAGCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950718 77 - 110113093 TCTTAGCCTGGGCAAAGAACTGGGAGACCAGCAGGCCAGCG----CTGGCTCTGCCATG---GAGG--GGAAGCACTTTGAAGCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92680257 75 - 92844088 TCTTAGCCTGGGCACAGAACTGGGAGACCAGCAGGCCAGCG----CTGGCTTTGCCAT-----GGG--GGAAGCACCTCCAAGCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96342352 76 + 96509753 TCTTAGCCTGGGCACAGAACTGGGAGACCAGCAGGCCAGCG----CTGGCTTTGCCAT----GGGG--GGAAGCACCTCCCAGCCC i macFas5.chr10 I 1513 C 0 s macNem1.NW_012014244v1 16816727 76 - 16982598 TCTTAGCCTGGGCACAGCACTGGGAGACCAGCAGGCCAGCG----CTGGCTTTGCCAT----GGGG--GGAAGCACTTCCAAGCCC i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90243285 77 - 90373283 TCTTAGCCTGGGCAAAGAATTGGGAGACCAGCAGGCCAGCG----CTGGCTTTGCCATG---GAGG--GGAAGCACTTCCAGGCCC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5493909 77 - 5823884 TCTTAGCCTGGGCAAAGAACTGGGAGACCAGGAGGCCAGCG----CTGGCTTTGCCGTG---GAGG--GGAAGCACGTCCAAGCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144011 76 + 159171411 TCTCAGCCTGGGCAAAACATTGGCAGGGCAGCAGGCCAGCT----CTGGCTCTGCCATG---GA-G--GGAAGCACATTGAAGCCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16208926 77 + 16356641 TCTTAGCTTGGGCAGAACACTGGCAGGGCAGCAGGCCCGCG----CTGACTCTGCCGTG---GAGG--GGAAGCACGCTGAAGCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1071070 77 + 1231380 TCTTAGCCTGGGCAAAACACTGGCAGGGCGGCAGGCCAGCG----CTGGCTCTGCCGTG---GAGG--GGAAGCACGCTGAAGCCC i cebCap1.NW_016107870v1 C 0 I 124 s aotNan1.NW_018500483v1 2610152 77 + 11732439 TCTTAGCCTCAGCAAAACATTGGTAGGGCAGCAGGCCAGCA----CTGGCTCTGCCGTG---GAGG--GGAAGCACGCTGAAGCCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22774876 82 + 22939663 --TCAGCCTGTGAAAGGAGCTAGGCAGTCAGGGAGCTGCTGGCTTCAGGCCCTGCTGTGCTCTGAG--GGAGGCACTTTGCAGACT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545326 58 + 47698779 -----CGTTGGGCCGGGAACTGG-AAACCAGGAGGCCGCCA----T----------------GGTC--CAAAGCAGCGTGACACCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183608 61 - 397369 -CTTGGCCTGAGCCAA------GGAGCCAAGGAGGCT-GAG----CTGGCCTGG--------GAGGTAGGAGGCAGT---GAGC-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M a score=212374.000000 s hg38.chr20_KI270870v1_alt 25425 62 + 183433 CACTGTT-----------CCTGGACTAGCTCTGCTGAACCACAGAGGGGCCGCCGTTTTCCCTT-GGCTGGGGT s panTro5.chr20 66357127 62 + 66533130 CACTGTT-----------CCTGGACTAGCTCTGCTGAACCACAGAGGGGCCGCCGTTTTCCCTT-GGCTGGGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035928 62 + 62195757 CACTGTT-----------CCTGGACTAGCTCTGCTGAACCACAGAGGGGCCGCCGTTTTCCCTT-GGCTGGGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425599 62 - 578057 CACTGTT-----------CCTGGACTAGCTCTGCTGAACCACAGAGGGGCCGCCGTTTTCCCTT-GGCTGGGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950795 62 - 110113093 CACTGTT-----------CCTGGACTAGCTCTGCTGAACCACAGAGGGGCCGCCGTTTTCCCTC-GGCTGCGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92680332 59 - 92844088 CACTGTT------------CTGCACTAGCTCTGCCCAAC--CAGAGGGGCCGCGGTTCTCCCTT-GGCCGGGGT i rheMac8.chr10 C 0 I 17 s macFas5.chr10 96342428 59 + 96509753 CACTGTT------------CCGCACTAGCTCTGCCCAAC--CAGAGGGGCCGCGGTGCTCCCTT-GGCCGGGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16816803 59 - 16982598 CACTGTC------------CTGCACCAGCTCTGCCGAAC--CAGAGGGGCCGCGGTTCTCCCTC-GGCCGGGGT i macNem1.NW_012014244v1 C 0 I 9 s chlSab2.chr2 90243362 61 - 90373283 CACTGTT------------CCGGACTAGCTCTGCTGAACCACAGAGGCGCCGCCGTTCGCCCTG-GGCCGGGGT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5493986 61 - 5823884 CACCGTT------------CTGGACTAGTTCTGCGCAACCACGGAGCGGCCGCCGTTTTCCCGT-GGCCGGGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144087 71 + 159171411 TGCTGTTCTGGGAGGCCCCCTGGACT-GCTCTGCTGAGCCACACAAAAGCCACGGTTTTCCCTC--GATCAGGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209003 54 + 16356641 TGCTGCTCTGGGAGGCCCCCTGGACT-GCTCTGCTGAGCCACACTGAGGC-------------------CCGGC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2610229 72 + 11732439 TGCTGTTCTGGGAGGCCCCCTGGACT-GCTCTGCTGAGCCACACAGAGGCCACGGTTTTCCCTC-AGCTCAGAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22774958 64 + 22939663 CCTTCCTCCAGGAGGCCTCCCAGGTCAGCCCTGTCCACCCACAGAGA--CAGGCATCTTTCCTG-GT------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545384 61 + 47698779 -CCTCTT--CAGGCGGCCCCT----CAGCTCGGCCG-TCCAGCCAGGGGCAGCC----TTCCGA-GACTGGGGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183669 61 - 397369 CGGTCCT-----------CCAGGA--GGGCCACCTGAGCACCGAGGGGACAGCAGCTTTCCCCGGGGTTGGGGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1071147 124 + 1231380 I a score=16408.000000 s hg38.chr20_KI270870v1_alt 25487 19 + 183433 AGAGGAACAGGGTCCTTCC s panTro5.chr20 66357189 19 + 66533130 AGAGGAACAGGGTCCTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62035990 19 + 62195757 AGAGGAACAGGGTCCTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425661 19 - 578057 AGAGGAACAGGGTCCTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109950857 19 - 110113093 AGAGGAACAAGGTCCTTCC i nomLeu3.chr13 C 0 I 502 s macFas5.chr10 96342487 1 + 96509753 -----------G------- i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90243423 1 - 90373283 -----------G------- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494047 3 - 5823884 ---------GGG------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144158 19 + 159171411 AGACAAACGGGGCCCTTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209057 19 + 16356641 AGAGGGGCAGGGCCCTTCC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2610301 19 + 11732439 AGACAAACAGGGCCCTCCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775022 17 + 22939663 GGAGGGGCAGGGTCTTG-- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545445 16 + 47698779 ACAGGGGCGGGATCCC--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183730 13 - 397369 -AGATGGCAGGGTC----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16816862 9 - 16982598 I e cebCap1.NW_016107870v1 1071147 124 + 1231380 I e rheMac8.chr10 92680391 17 - 92844088 I a score=1911.000000 s hg38.chr20_KI270870v1_alt 25506 1 + 183433 T s panTro5.chr20 66357208 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036009 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425680 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chr5 58144177 1 + 159171411 T i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209076 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2610320 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545461 0 + 47698779 C e cerAty1.NW_012001373v1 3619666 1834 - 3785965 I e colAng1.NW_012114444v1 5494050 0 - 5823884 C e chlSab2.chr2 90243424 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183743 0 - 397369 C e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16816862 9 - 16982598 I e cebCap1.NW_016107870v1 1071147 124 + 1231380 I e nomLeu3.chr13 109950876 502 - 110113093 I e rheMac8.chr10 92680391 17 - 92844088 I e otoGar3.GL873542 22775039 0 + 22939663 C e macFas5.chr10 96342488 0 + 96509753 C a score=26041.000000 s hg38.chr20_KI270870v1_alt 25507 9 + 183433 GTGGCTCCT s panTro5.chr20 66357209 9 + 66533130 GTGGCTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036010 9 + 62195757 GTGGCTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425681 9 - 578057 GTGGCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96342488 9 + 96509753 GCGGCTCCC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3621500 9 - 3785965 GTGGCTCCC i cerAty1.NW_012001373v1 I 1834 C 0 s chlSab2.chr2 90243424 9 - 90373283 GTGGCTCCC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494050 7 - 5823884 --GGCGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144178 9 + 159171411 CCGGTTCCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209077 7 + 16356641 CC--TTCCC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2610321 9 + 11732439 CCGGTTCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775039 9 + 22939663 GTGGGTCCT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545461 8 + 47698779 -CAGACCTT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183743 0 - 397369 C e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16816862 9 - 16982598 I e cebCap1.NW_016107870v1 1071147 124 + 1231380 I e nomLeu3.chr13 109950876 502 - 110113093 I e rheMac8.chr10 92680391 17 - 92844088 I a score=34309.000000 s hg38.chr20_KI270870v1_alt 25516 7 + 183433 GGCTGAG s panTro5.chr20 66357218 7 + 66533130 GGCTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036019 7 + 62195757 GGCTGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425690 7 - 578057 GGCTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96342497 7 + 96509753 GGCTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16816871 7 - 16982598 GGCTCAG i macNem1.NW_012014244v1 I 9 C 0 s cerAty1.NW_012001373v1 3621509 7 - 3785965 GGCTCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243433 7 - 90373283 GGCTCAG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494057 7 - 5823884 GGCTCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144187 7 + 159171411 GGCTGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209084 7 + 16356641 GGCGGAG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2610330 7 + 11732439 GGCTGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775048 7 + 22939663 GGCTGAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545469 4 + 47698779 GGTG--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183743 5 - 397369 --CTGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1071147 124 + 1231380 I e nomLeu3.chr13 109950876 502 - 110113093 I e rheMac8.chr10 92680391 17 - 92844088 I a score=127853.000000 s hg38.chr20_KI270870v1_alt 25523 21 + 183433 CCAGGTTCTGTGCGACGCGGA s panTro5.chr20 66357225 21 + 66533130 CCAGGTTCTGTGCGACGCGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036026 21 + 62195757 CCAGGTTCTGTGCGACGCGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425697 21 - 578057 CCGGGTTCTGTGCGACGCGGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680408 21 - 92844088 CCAGGTTCTGCGCGGTGCGGC i rheMac8.chr10 I 17 C 0 s macFas5.chr10 96342504 21 + 96509753 CCAGGTTCTGCGCGGTGCGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16816878 21 - 16982598 CCACGTTCTGCGCGGTGCGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3621516 21 - 3785965 CCACGTTCCGCGCGCTGCGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243440 21 - 90373283 CCAGGTTCTGCGCGGTGCGGC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494064 21 - 5823884 CCAGGCTCTGCGCGGTGCGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144194 21 + 159171411 CCAGGTTCTGTGTTTTGCAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209091 21 + 16356641 CCAAGTTCTGCGTGATGCAGG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2610337 19 + 11732439 CCAGGTTCTGTG--ATGCAGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775055 21 + 22939663 CCAGGTTCTACATGGTGCAGC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545473 20 + 47698779 -CGTGGTTCCTGCAACGCAGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183748 21 - 397369 ATGGGGTCTGCTCAAGGCAGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1071147 124 + 1231380 I e nomLeu3.chr13 109950876 502 - 110113093 I a score=317770.000000 s hg38.chr20_KI270870v1_alt 25544 37 + 183433 CCAACCCTGACCCCCAGTGGCCAGTTCCGAGAACTGC s panTro5.chr20 66357246 37 + 66533130 CCAACCCTGACCCCCAGTGGCCAGTTCCGAGAACTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036047 37 + 62195757 CCAACCCTGACCCCCAGTGGCCAGTTCCGAGAACTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425718 37 - 578057 CCAACCCTGACCCCCAGTGGCCAGTTCCTAGAACTGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680429 37 - 92844088 CCGACCCTGCCCCCCAGTGGCCAGCGCGGAGAACTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96342525 37 + 96509753 CCGACCCTGCCCCCCAGTGGCCAGCGCGGAGAACTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16816899 37 - 16982598 CCGACCCTGCCCCCCAGTGGCCAGCGCGGAGAACTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3621537 37 - 3785965 CCAACCCTGCCCCCCAGTGGCCAGCGCGGAGAACTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243461 37 - 90373283 CCAAGCCTGACCCCCAGTGGCCAGCGCGGAGAACTGC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494085 37 - 5823884 CCAACCCTGACCCCCAGTGGCCGGTGCGGAGAACTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144215 37 + 159171411 CTAGCCCTGCCCCCCAGTGGCCAGTTCCTAGAACTGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209112 37 + 16356641 CCAGCCCTGCCCCCCAGTGGCCAGTTCCCAGAACTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1071271 37 + 1231380 CCAGCCCTGCCCCCGAGCGGCCAGTTCCCAGAACTGC i cebCap1.NW_016107870v1 I 124 C 0 s aotNan1.NW_018500483v1 2610356 37 + 11732439 CCAGCCCTGCTCCCCAGTGGCCAGTTCCCAGAACTGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775076 33 + 22939663 TTGAGGCTGAACCCCAGTGGTCACTTCTGAGCA---- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545493 37 + 47698779 CCGAGCCTGACACCCAGTGGCCAGCTGTGAGCACTGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 183769 36 - 397369 TCAACGCTGA-CCCTGGTGGCCAGTTCTGATCACTGC i dasNov3.JH569290 C 0 I 3224 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e nomLeu3.chr13 109950876 502 - 110113093 I a score=67825.000000 s hg38.chr20_KI270870v1_alt 25581 7 + 183433 TGCAGAG s panTro5.chr20 66357283 7 + 66533130 TGCAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036084 7 + 62195757 TGCAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425755 7 - 578057 TGCAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680466 7 - 92844088 TGCGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96342562 7 + 96509753 TGCGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16816936 7 - 16982598 TGCGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3621574 7 - 3785965 TGCGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243498 7 - 90373283 TGCGGAG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494122 7 - 5823884 TGCAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144252 7 + 159171411 TGCAGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209149 7 + 16356641 TGCAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1071308 7 + 1231380 TGCCGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2610393 7 + 11732439 TGCAGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775109 7 + 22939663 TGCAGAA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47545530 7 + 47698779 TGCAGGG i canFam3.chr24 C 0 I 10261 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e nomLeu3.chr13 109950876 502 - 110113093 I a score=42505.000000 s hg38.chr20_KI270870v1_alt 25588 7 + 183433 GAAAAGG s panTro5.chr20 66357290 7 + 66533130 GGAAAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036091 7 + 62195757 GGAAAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425762 7 - 578057 GAAAACG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680473 7 - 92844088 GAGAAGG i rheMac8.chr10 C 0 I 135 s macFas5.chr10 96342569 7 + 96509753 GAGAAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16816943 7 - 16982598 GAGAAGG i macNem1.NW_012014244v1 C 0 I 136 s cerAty1.NW_012001373v1 3621581 7 - 3785965 GAAAAGG i cerAty1.NW_012001373v1 C 0 I 137 s chlSab2.chr2 90243505 6 - 90373283 GAAAAG- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494129 6 - 5823884 GAAAAG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144259 7 + 159171411 GAAAAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209156 7 + 16356641 GAAAAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1071315 7 + 1231380 GAAAAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2610400 7 + 11732439 GAAAAGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775116 7 + 22939663 GAGGAGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e nomLeu3.chr13 109950876 502 - 110113093 I a score=-5360.000000 s hg38.chr20_KI270870v1_alt 25595 4 + 183433 ---------------GA-CC--------------------- s panTro5.chr20 66357297 4 + 66533130 ---------------GA-CC--------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036098 4 + 62195757 ---------------GA-CC--------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425769 4 - 578057 ---------------GA-CC--------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96342576 2 + 96509753 ------------------AC--------------------- i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90243511 4 - 90373283 ---------------GA-CC--------------------- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494135 4 - 5823884 ---------------GA-CC--------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144266 4 + 159171411 ---------------GA-CC--------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209163 5 + 16356641 ---------------GACCC--------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1071322 4 + 1231380 ---------------GA-CC--------------------- i cebCap1.NW_016107870v1 C 0 I 180 s aotNan1.NW_018500483v1 2610407 4 + 11732439 ---------------GA-CT--------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775123 40 + 22939663 GGGACAGTATCCTGTGA-CCCCAGCCCAGCTTCTTGACACC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3621588 137 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16816950 136 - 16982598 I e nomLeu3.chr13 109950876 502 - 110113093 I e rheMac8.chr10 92680480 135 - 92844088 I a score=50441.000000 s hg38.chr20_KI270870v1_alt 25599 21 + 183433 ATTCAGTAGGGTGGG------------------------------------------------GGTGGG--- s panTro5.chr20 66357301 21 + 66533130 ATTCGGTAgggtggg------------------------------------------------ggtggg--- i panTro5.chr20 C 0 I 133 s panPan2.chr20 62036102 21 + 62195757 ATTCGGTAgggtggg------------------------------------------------ggtggg--- i panPan2.chr20 C 0 I 133 s gorGor5.CYUI01015848v1 425773 21 - 578057 ATTCAGTAgggtggg------------------------------------------------ggtggg--- i gorGor5.CYUI01015848v1 C 0 I 139 s macFas5.chr10 96342578 21 + 96509753 GTTCCGCAGGGCGGG------------------------------------------------GGCGGG--- i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90243515 21 - 90373283 GTTCAGCAGGGCGGG------------------------------------------------GGCGGG--- i chlSab2.chr2 C 0 I 109 s colAng1.NW_012114444v1 5494139 21 - 5823884 GTTCAGTAGGGCGGG------------------------------------------------GGCGGG--- i colAng1.NW_012114444v1 C 0 I 113 s calJac3.chr5 58144270 21 + 159171411 GTTCTGTAGGGTCGG------------------------------------------------GGTGGG--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209168 21 + 16356641 GCTCTGCAGGGTAGG------------------------------------------------GGTGGG--- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2610411 21 + 11732439 GGTCTGTAGTGTAGG------------------------------------------------GGTGGG--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775163 71 + 22939663 -TTCTAAAGTGTAGGCTGCGCACACCCACAGGAGGTCCTTGGTGCTAGACCAGGACCAGGCCAGGTGGCTGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3621588 137 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16816950 136 - 16982598 I e cebCap1.NW_016107870v1 1071326 180 + 1231380 I e nomLeu3.chr13 109950876 502 - 110113093 I e rheMac8.chr10 92680480 135 - 92844088 I a score=14250.000000 s hg38.chr20_KI270870v1_alt 25620 3 + 183433 GGC s panTro5.chr20 66357455 3 + 66533130 GGC i panTro5.chr20 I 133 C 0 s panPan2.chr20 62036256 3 + 62195757 GGC i panPan2.chr20 I 133 C 0 s gorGor5.CYUI01015848v1 425933 3 - 578057 GGC i gorGor5.CYUI01015848v1 I 139 C 0 s macFas5.chr10 96342599 3 + 96509753 CGC i macFas5.chr10 C 0 I 109 s chlSab2.chr2 90243645 3 - 90373283 GGC i chlSab2.chr2 I 109 C 0 s colAng1.NW_012114444v1 5494273 3 - 5823884 GGC i colAng1.NW_012114444v1 I 113 C 0 s calJac3.chr5 58144291 3 + 159171411 GGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209189 3 + 16356641 GGC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2610432 3 + 11732439 GGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22775234 3 + 22939663 GGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3621588 137 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16816950 136 - 16982598 I e cebCap1.NW_016107870v1 1071326 180 + 1231380 I e nomLeu3.chr13 109950876 502 - 110113093 I e rheMac8.chr10 92680480 135 - 92844088 I a score=13593.000000 s hg38.chr20_KI270870v1_alt 25623 6 + 183433 TTGCGC s panTro5.chr20 66357458 6 + 66533130 TGGCGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036259 6 + 62195757 TGGCGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425936 6 - 578057 TTGCGC i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90243648 6 - 90373283 TGGCGC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494276 6 - 5823884 TGGCGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144294 6 + 159171411 TGGCGT i calJac3.chr5 C 0 I 91 s saiBol1.JH378156 16209192 6 + 16356641 CGGCGT i saiBol1.JH378156 C 0 I 97 s aotNan1.NW_018500483v1 2610435 6 + 11732439 TGGCGT i aotNan1.NW_018500483v1 C 0 I 92 s otoGar3.GL873542 22775237 6 + 22939663 TCATTC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3621588 137 - 3785965 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16816950 136 - 16982598 I e cebCap1.NW_016107870v1 1071326 180 + 1231380 I e nomLeu3.chr13 109950876 502 - 110113093 I e rheMac8.chr10 92680480 135 - 92844088 I e macFas5.chr10 96342602 109 + 96509753 I a score=256344.000000 s hg38.chr20_KI270870v1_alt 25629 37 + 183433 GGCATTCATTTTCGAGTGGACATGGGGGCAGGCAGgc s panTro5.chr20 66357464 37 + 66533130 GGCATTCATTTTCGAGTGGACATGGGGGCAGGCAGgc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036265 37 + 62195757 GGCATTCATTTTCGAGTGGACATGGGGGCAGGCAGgc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425942 37 - 578057 GGCATTCATTTTCGAGTGGACGTGGGGGCAGGCAGgc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680615 37 - 92844088 GGCACTCATTTTCGAGTGGGCATGGGGGCAGGCAGGC i rheMac8.chr10 I 135 C 0 s macFas5.chr10 96342711 37 + 96509753 GGCACTCATTTTCGAGTGGGCATGGGGGCAGGCAGGC i macFas5.chr10 I 109 C 0 s macNem1.NW_012014244v1 16817086 37 - 16982598 GGCACTCATTTTCGAGTGGGCATGGGGGCAGGCAGGC i macNem1.NW_012014244v1 I 136 C 0 s cerAty1.NW_012001373v1 3621725 37 - 3785965 GGCACTCATTTTCGAGTGGGCATGGGGGCAGGCAGGC i cerAty1.NW_012001373v1 I 137 C 0 s chlSab2.chr2 90243654 37 - 90373283 GGCACTCATTTTCGAGTGGGCATGGGGGCAGGCAGGC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494282 37 - 5823884 GGCACTCGTTTTCGACTGGGCATGGGGGCAGGCAGgc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144391 37 + 159171411 GGCACTCATTTTCGAGTGGGTATGGGAACAGGCAGGC i calJac3.chr5 I 91 I 1 s saiBol1.JH378156 16209295 36 + 16356641 GGCATTCATTTTCGAGTGGGCATGGGAACAGG-AAGC i saiBol1.JH378156 I 97 I 1 s aotNan1.NW_018500483v1 2610533 37 + 11732439 CGCACTCATTTTCGAGTGGGCATGGGAACAGGCAGGC i aotNan1.NW_018500483v1 I 92 I 10 s otoGar3.GL873542 22775243 37 + 22939663 AGCACACATCTGCACACAGGCATGTGAGGGGGCATAC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1071326 180 + 1231380 I e nomLeu3.chr13 109950876 502 - 110113093 I a score=101223.000000 s hg38.chr20_KI270870v1_alt 25666 24 + 183433 ---cagtctctgatgatttaaggatgc s panTro5.chr20 66357501 24 + 66533130 ---cagtctctgatgatttaaggatgc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036302 24 + 62195757 ---cagtctctgatgatttaaggatgc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 425979 24 - 578057 ---cagtctctgatgatttaaggatgc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680652 24 - 92844088 ---CAGTCTCTGGTGGTTTAAGGAtgc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96342748 24 + 96509753 ---CAGTCTCTGGTGGTTTAAGGAtgc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817123 24 - 16982598 ---CGGTCTCTGATGGTTTAAGGAtgc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3621762 24 - 3785965 ---CAGTCTCTGATGGTTTAAGGAtgc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243691 24 - 90373283 ---CAGTCTCTGATGGTTTAAGGAtgc i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494319 24 - 5823884 ---cagtctctgatggtttaaggatgc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144429 9 + 159171411 ---CTGTCTCTG--------------- i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16209332 9 + 16356641 ---CTGTCTCTG--------------- i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22775280 27 + 22939663 TTCATGTCCCTGAGGCTTTAGGGCtgc i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1071326 180 + 1231380 I e aotNan1.NW_018500483v1 2610570 10 + 11732439 I e nomLeu3.chr13 109950876 502 - 110113093 I a score=1494894.000000 s hg38.chr20_KI270870v1_alt 25690 197 + 183433 tgtggtttgaatatttgtcacctccaaaactcaagttggaatttaatccccaatgtggca-gtattgagaggtggggcctttaagaggtgattgggtcacaagagctctgccctcatgaatagattaatttatttatagattaatgggttatcataggagtggggctagtagctttataaga----agagagagacctgagc s panTro5.chr20 66357525 197 + 66533130 tgtggtttgaatatttgtcacctccaaaactcaagttggaatttaatccccaatgtggca-gtattgagaggtggggcctttaagaggtgattgggtcacaagagctctgccctcatgaatagattaatttatttatagattaatgggttatcataggagtggggctagtagctttataaga----agagagagacctgagc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036326 197 + 62195757 tgtggtttgaatatttgtcacctccaaaactcaagttggaatttaatccccaatgtggcg-gtattgagaggtggggcctttaagaggtgattgggtcacaagagctctgccctcatgaatagattaatttatttatagattaatgggttatcataggagtggggctagtagctttataaga----aaagagagacctgagc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426003 197 - 578057 tgtggtttgaatatttgtcacctccaaaactcaagttggaatttaatccccaatgtggca-gtatttagaagtggggcctttaagaggtgattgggtcacaagagctctgccctcatgaatagattaatttatttatagattaatgggttatcataggagtggggctagtagctttacaagg----agagagagacctgagc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680676 197 - 92844088 tgtggtttgagtatttgtcccctccgaaactcaagttggaatttcatccccaatgcggcc-gtgttgagaggcggggcctttaagaggtgagtgggtcacaagagctctgccctcatgaatggattaatttatttatagattaatgggttatcataggagtggggctggtggctttgtaaga----agagagagacctgagc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96342772 197 + 96509753 tgtggtttgagtatttgtcccctccgaaactcaagttggaatttcatccccaatgcggcc-gtattgagaggcggggcctttaagaggtgagtgggtcacaagagctctgccctcatgaatggattaatttatttatagattaatgggttatcataggagtggggctggtggctttgtaaga----agagagagacctgagc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817147 197 - 16982598 tgtggtttgagtatttgtcccctccgaaactcaagttggaatttcatccccagtgcggcc-gtattgagaggcggggcctttaagaggtgagtgggtcccaagagctctgccctcatgaatggattaatttatttatagattgatgggttatcataggagtggggctggtggctttgtaaga----agagagagacctgagc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3621786 197 - 3785965 tgtggtttgagtatttgtcccctccgaaactcaagttggaatttcatccccaatgcggcc-gtattgagaggcggggcctgtaagaggtgagtgggtcacaagagctctgccctcatgaatggattaatttatttatagattaatgggttatcataggagtggggctggtggctttgtaaga----agagacagacctgagc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243715 196 - 90373283 tgtggtttgagtatttgtcccctccgaaactcaagttggaatttcatccccaatgcggcc-gtattgagaggcggggcctttaagaggtgagt-ggtcacaagagctctgccctcatgaatggattaatttatttatagattaatgggttatcacaggagtggggctggtggctttgtaaga----agagagagacctgagc i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494343 197 - 5823884 tgtggttcgaatatttgtcccctccgaaactcaagttggaatttcatccccaatgcggcg-gtattgagaggcggggcgtttaagaggtgagtgggccacaagagctctgccctcatgaatggattcatttatttgtagattaatgggttatcataggagtggggctggtggctttgtaaga----agagggagacctgagc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144438 187 + 159171411 tgtggtttgaatatctgtcccctccaaaactc------gaaactagtccccaatgtggcacttatt--ggggggggggctttaagaggtgattgggtcacaagagctctgccctcatgaatggattaacttatttatggattaatgggttatcataggagtggggttggcagctttat---a----agagagagacctgagc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209341 194 + 16356641 tgtggtttgaatacccgtcccctccaaaactcaagtt-gaaattaatccccaatgtggca-gtatt--ggggggggggctttgagaggtgattgggtcacgagagctctgcccttatgaatggattaatttatttatggattaatgggttattgtaggaatggggttggcggctttctagga----agagagagacctgaga i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1071506 192 + 1231380 tgtggtttggatacctgtcccctccaaaactcaagtt-gaaattaatccccaatgtggca-gtatt----ggggggggctttaagaggtgattgggtcacaagagctctgccctcatgaatggattaatttatttatggattagtgggtgatcataggagtggggttggcggctttataaga----agagagagacctgagc i cebCap1.NW_016107870v1 I 180 C 0 s aotNan1.NW_018500483v1 2610580 190 + 11732439 tgtggtttgagtatctgtcacctccaaaactcaagct-gaaactaatctccagtgtggta-gtatt----gggggggcctttaagaggtgattgggtcacaagagctctgccctcatgaatgggttaatttatttatagattaatgggttatcataggagtgggattggcggctttata--a----gaagagagacctgcgc i aotNan1.NW_018500483v1 I 10 C 0 s otoGar3.GL873542 22775307 198 + 22939663 tgtggtttggatactagtcttctctaaaactcatgttgaaatttaa-ccctggcgtggca--tatgaagaggcagggcctttatgaggcacttgggctgtgagagctttgcactcctgaggagggtaaccttctcacagattaatgggttattgctggaacagg-ctggaggttttatgtgatgaggaagagagacctgggc i otoGar3.GL873542 C 0 I 5355 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e nomLeu3.chr13 109950876 502 - 110113093 I a score=328491.000000 s hg38.chr20_KI270870v1_alt 25887 46 + 183433 cagcacgctca----------------------------------gcccctcaccatgcgacgccctgcactgccttggg s panTro5.chr20 66357722 46 + 66533130 cagcacgctca----------------------------------gcccctcaccatgcgacgccctgcactgccttggg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036523 46 + 62195757 cagcacgctca----------------------------------gcccctcaccgtgcgacgccctgcactgccttggg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426200 46 - 578057 cagcacgctca----------------------------------gcccctcaccatgcgacgccctgcactgccttggg i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680873 46 - 92844088 cggcacgctca----------------------------------gcccctcaccctgtgacgccctgcactgccttggg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96342969 46 + 96509753 cggcacgctca----------------------------------gcccctcaccctgtgacgccctgcactgccttggg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817344 46 - 16982598 cggcacgctca----------------------------------gcccctcaccctgtgacgccctgcactgccttggg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3621983 46 - 3785965 cggcacgctca----------------------------------gcccctcaccctgtgacgccctgcactgccttggg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243911 46 - 90373283 cggcaccctca----------------------------------gcccctcaccctgtgacgccctgcactgccttggg i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494540 46 - 5823884 cggcacgctca----------------------------------gcccctcaccctgtgacgccctgcactgccttggg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144625 46 + 159171411 cagcatggtca----------------------------------gcccctcaccacgtgccaccctgcactgccctggg i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16209535 46 + 16356641 cagcacgctca----------------------------------gcctctcaccacacgcggccctgcactgccctggg i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1071698 80 + 1231380 cagcatgctcagcccctcaccacgtgccgcccctcaccacgtgccgcccctcaccacgtgccgccctgcactgccctggg i cebCap1.NW_016107870v1 C 0 I 9 s aotNan1.NW_018500483v1 2610770 46 + 11732439 cagcgtgctca----------------------------------gcccctcaccacgtgccgccctgcactgccctggg i aotNan1.NW_018500483v1 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e nomLeu3.chr13 109950876 502 - 110113093 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=9427.000000 s hg38.chr20_KI270870v1_alt 25933 5 + 183433 actc---t s panTro5.chr20 66357768 5 + 66533130 actc---t i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036569 5 + 62195757 actc---t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426246 5 - 578057 actc---t i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680919 5 - 92844088 actc---c i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96343015 5 + 96509753 actc---c i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817390 5 - 16982598 actc---c i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3622029 5 - 3785965 actc---c i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243957 5 - 90373283 actc---c i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494586 5 - 5823884 actc---c i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144672 4 + 159171411 actt---- i calJac3.chr5 I 1 I 4 s saiBol1.JH378156 16209582 4 + 16356641 actc---- i saiBol1.JH378156 I 1 I 4 s aotNan1.NW_018500483v1 2610817 7 + 11732439 acttgcg- i aotNan1.NW_018500483v1 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1071778 9 + 1231380 I e nomLeu3.chr13 109950876 502 - 110113093 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=625560.000000 s hg38.chr20_KI270870v1_alt 25938 109 + 183433 ggggttcccaccagcaagaaaacctcaccagatgtggcccattgaccttggacttcccagcccgcagaactgtaagaaa----------------------------------------------------------------------------------------------ta--------------cattttgtttcttttaaattacccagt-------------------------------------------t s panTro5.chr20 66357773 109 + 66533130 ggggttcccaccagcaagaaaacctcaccagatgtggcccattgaccttggacttcccagcccccagaactgtaagaaa----------------------------------------------------------------------------------------------ta--------------cattttgtttcttttaaattacccagt-------------------------------------------t i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036574 109 + 62195757 ggggttcccaccagcaagaaaacctcaccaggtgtggcccattgaccttggacttcccagcccccagaactgtaagaaa----------------------------------------------------------------------------------------------ta--------------cattttgtttcttttaaattacccagt-------------------------------------------t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426251 109 - 578057 ggggttcccaccagcaagaaaacctcaccagatgtggcccattgaccttggacttcccagcccccagaactgtaagaaa----------------------------------------------------------------------------------------------ta--------------cgttttgtttcttttaaattacccagt-------------------------------------------t i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92680924 192 - 92844088 ggggttcccaccagcgagaaagcctcaccagatgtggcccattgactttggacttcggagcccccagacctgtaagaaatat-tttgtttcttttaaatta---------------------------------------------cccagt---------------------ttcagatatATAAATACATTCTGTTCCTTttaaattgcccagtttcagatatataaatacattctgttcctttcaaattgcccgg-t i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96343020 193 + 96509753 ggggttcccaccagcgagaaagcctcaccagatgtggcccattgactttggacttcggagcccccagacctgtaagaaatat-tttgtttcttttaaattacccagtttc--agatatATAAATACATTCTGTTCCTTttaaattgcccagtttca-------gatatataaata--------------cattctgttccttttaaattgcccagt-------------------------------------------t i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817395 150 - 16982598 ggggttcccaccagcgagaaagcctcaccagatgtggcccattgactttggacttcggagcccccagacctgtaagaaatat-tttgtttcttttaaatta---------------------------------------------cccagtttca-------gatatataaata--------------cattctgttccttttaaattgcccagt-------------------------------------------t i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3622034 150 - 3785965 ggggttcccgccagcgagaaagcctcaccagatgtggcccattgactttggacttcggagcccccagacctgtaagaaatat-tttgtttcttttaaattactcagtttcagatatataaa----------------------------------------------------ta--------------cattctgttccttttaaattgcccagt-------------------------------------------t i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90243962 152 - 90373283 ggggttcccaccagcgagaaagtcttcccagatgtggcccattgactttggacttcggagcccccagacctgtaagaaa----------------------------------------------------------------------------------------------ta--------------cattttgtttcttttaaattacccagtttcagatatataaatacattctgttccttttaaattgcccagtt i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494591 152 - 5823884 ggggttcccaccagcaagaaagcctcaccagatgtggcccattgactttggacttcggagcccccagacctgtaagaaa----------------------------------------------------------------------------------------------ta--------------cattttgtttcttttaaattacccagtttcagatatataaatacattctgttccttttaaattgcccagtt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144680 150 + 159171411 gggattccccccag-cagaaagcctcaccagatgtgacccattgaccttggaattcccagcccccagaactctaagaaatatattttgttactttaaattaccca----------------------------------------------------gtttcagacacatagata--------------tagtttgtttcttttaaatcacccagt-------------------------------------------t i calJac3.chr5 I 4 C 0 s saiBol1.JH378156 16209590 157 + 16356641 gggattcccaccagccagaaagcctcaccagatgtggcccagtgaccttggacttcccagcctccagaactgtaagaaatacatttcgttgctttaaattacccagtgtc----------------------------------------------tgtttcagacacgtagata--------------tattttgtttcttttaaatcacccagt-------------------------------------------g i saiBol1.JH378156 I 4 C 0 s cebCap1.NW_016107870v1 1071787 151 + 1231380 gggattcccaccagccagaaagcctcaccagatgtggcccattgaccttggacttcccagcccctagaactgtaagaaatacattttgttcctttaaattaccca----------------------------------------------------gtttcagatgcatagata--------------tattttgtttcttttaaatcacccagt-------------------------------------------g i cebCap1.NW_016107870v1 I 9 C 0 s aotNan1.NW_018500483v1 2610824 148 + 11732439 gggattcccaccggcgagcaagcctcaccagatgtggcccattgaccttggacttcccagccccccg-actgtaagaaatacattttgttgctttaaattaccca----------------------------------------------------gtttcagactc--agata--------------tatttcgtttcttttaaatcacccagt-------------------------------------------t i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e nomLeu3.chr13 109950876 502 - 110113093 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=1117994.000000 s hg38.chr20_KI270870v1_alt 26047 143 + 183433 tctgttataagcagcaggaaacagactaagacaaggggcaagccagcctct------gcccacaaggagctccattctggtgtggagagacccaaacacacaactaTGCTCTTTGTCTTGCTAGAGACTTGTTTTGTGGTGGCCCCAAC s panTro5.chr20 66357882 143 + 66533130 tctgttataagcagcaggaaacagactaagacaaggggcaagccagcctct------gcccacaaggagctccattctggtgtggagagacccaaacacacaactaTGCTCTTTGTCTTGCTAGAGACTTGTTTTGTGGTGGCCCCAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036683 143 + 62195757 tctgttataagcagcaggaaacagactaagacaaggggcaagccagcctct------gcccacaaggagctccattctggtgtggagagacccaaacacacaactaTGCTCTTTGTCTTGCTAGAGACTTGTTTTGTGGTGGCCCCAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426360 143 - 578057 tctgttataagcagcaggaaacagactaagacaaggggcaagccagcctct------gcccacaaggagctccattctggtgtggagagacccaaacacacaactaTGCTCTTTGTCTTGCTAGAGACTTGTTTTGTGGTGGCCCCAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109951378 140 - 110113093 TTCGTTATAAGCAGCAGGAAACAGACTAAGACAAGCGGCAAGCCAGCCCCT------GCCCACAAGGAGCTCCATTCTGGTGCTGAGAGACCCAGACACACAACGATGCTGTTTGTCTTGCTATAGA---GACTTGTGGTGGCCCCAAC i nomLeu3.chr13 I 502 C 0 s rheMac8.chr10 92681116 142 - 92844088 tctgttacaagcagcaggaaacagactaagacaAGGGGCGAGCCAGCCCCT------GCCCACAAGGAGCTCCATTCTGGTGTTGAGA-ACCCAAGCACGCAACTGTGACCTTTGTCATGCTGGAGACTTGTTTTGTGGTGGCCCCAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96343213 142 + 96509753 tctgttacaagcagcaggaaacagactaagacaAGGGGCAAGCCAGCCCCT------GCCCACAAGGAGCTCCATTCTGGTGTTGAGA-ACCCAAGCACGCAACTGTGACCTTTGTCATGCTGGAGACTTGTTTTGTGGTGGCCCCAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817545 142 - 16982598 tctgttacaagcagcaggaaacagactaagacaAGGGGCAAGCCAGCCCCT------GCCCACAAGGAGCTCCATTCTGGTGTTGAGA-ACCCAAGCACGCAACTGTGACCTTTGTCATGCTGGAGACTTGTTTTGTGGTGGCCCCAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3622184 142 - 3785965 tctgttatgagcagcaggaaacagactaagacaAGGGGCAAGCCAGCCCCT------GCCCACAGGGAGCTCCATTCTGGTGTTGAGA-ACCCAAGCACACAACTGTGACCTTTGTCATGCTGGAGACTTGTTTTGTGGTGGCCCTAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90244114 141 - 90373283 tctgttataagcagcaggaaacagactaagacaAGGGGCAAGCCAGCCTCT------GCCCACAAGGAGCTCCATTCTGGTGTTGAGA-GCCCAAGCACGCAACTGTGACC-TTGTCATGCTGGAGACTTGTTTTGTGGTGGCCGCAAC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494743 142 - 5823884 tctgttataagcagcaggaaacagactaagacaaggggcaagccagcccct------gcccacaaggagctccattctggtgttgaga-gcccagacacgcaaCTGTGACCTTTGTCATGCTGGAGACTTGTGTTGTGGTGGCCCCAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144830 141 + 159171411 tctgttataagcaacagtaaac--actaaaacaAGGGCCGAGCCAGCCCCT------GCCCACAAGGAGCTCCATTCTGATGCTGAGAGACCCAAACGCACACCTGTGATCTTTGTCATGCTAGAGACTTGTTTTGTGTTGGCCCCAAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209747 145 + 16356641 tctgttataagcaacaggaaac--actaagacaAGAGCAGAGCTAGCCCCTGCCCACGCCCACGCGGAGCTCCATTCTGGTGCT--GAGACCCAAACGCACACCTGTGGTCTTTGCCATGCCAGAGACTTGTTTTGTGGCGGCCCCAAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1071938 141 + 1231380 tctgttataagcaacaggaaac--actaagacaagggcagagccagcccct------gcccataaggagctccattctggtgcggagagacccagacgcacacctgtgaTCTTTGTCATGCCAGAGACTTGTTTTGTGGTGGCCCCAAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2610972 138 + 11732439 tctgttacaagcagcaggaaac--actaaggcaGTGGCCGAGCCAGCCCT-------GCCCACTAGGAGCTCCATTCCGGTGCT--GAGACCCGAACGCACAGCTGTGATCTTTGTCATGCTAGAGACTTGTTTTGTGGCGGCCCCAAG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 183805 3224 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e otoGar3.GL873542 22775505 5355 + 22939663 I a score=1847136.000000 s hg38.chr20_KI270870v1_alt 26190 213 + 183433 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------AAGTCAATTTTACACAGCAAATTAAACCCCAGGGTAAATGTGTGTACCTGGATTCCAATAGTAGGTAAAGATTCTTAATGGTGAAAACTATGACTCCTGTTAAAACTCTTGTGTTCTGTTCTTACCACTGAGTTTAAACAACAAC------------TC--TGTGCTAATCGTATAAAGAATATTTTTGT---CTGGACT s panTro5.chr20 66358025 213 + 66533130 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------AAGTCAATTTTACACAGCAAATTAAACCCCAGGGTAAATGTGTGTACCTGGATTCCAATAGTAGGTAAAGATTCTTAATGGTGAAAACTATGACTCCTGTTAAAACTCTTGTGTTCTGTTCTTGCCACTGAGTTTAAACAACAAC------------TC--TGTGCTAATCGTATAAAGAATATTTTTGT---CTGGACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62036826 213 + 62195757 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------AAGTCAATTTTACACAGCAAATTAAACCCCAGGGTAAATGTGTGTACCTGGATTCCAATAGTAGGTAAAGATTCTTAATGGTGAAAACTATGACTCCTGTTAAAACTCTTGTGTTCTGTTCTTGCCACTGAGTTTAAACAACAAC------------TC--TGTGCTAATCGTATAAAGAATATTTTTGT---CTGGACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426503 213 - 578057 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------AAGTCAATTTTACACAGCAAATTAAACCCCAGGGTAAATGTGTGTACCTGGATTCCAATAGTAGGTAAAGATTCTTAATGGTGAAAACTCTGACTCCTGTTAAAACTCTTGTGTTCTGTTCTTGCCACTGAGTTTAAACAACAAC------------TC--TGTGCTAATTGTATAAAGCATATTTTTGT---CTGGACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109951518 213 - 110113093 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------AAGTCAATTTTACATAGCAAATTAAACCCCAGGGTAAATATGTGTGCCTGGATTCCAACCGTAGGTAAAGATTCTTAATGGTGAAAACTACGACTCCCATTAAAACTCTTGTGTTCTGTTCTTGCCACTGAGTTTAAACAACAAC------------TC--TGTGCTAGTCGCATAAAGAATATTTTTGT---CTGGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92681258 223 - 92844088 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------ACGTCAATTTTACATAGCAAATTAAA-CCCAGGGTAAATGTGTGTACCTGGATTCCAATAGCAGGTAAATATTCTTAATGGTGAAAACTACAACTCCTGTTGAAACTCTTGTGTGCTGCTCTTGCCACTGAGTTTAAACAACAACA-AAAAAACAACTC--TGTGCTAATCATATAAAGAATATTTTTGT---CTGGACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96343355 222 + 96509753 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------ACGTCAATTTTACATAGCAAATTAAA-CCCAGGGTAAATGTGTGTACCTGGATTCCAATAGCAGGTAAATATTCTTAATGGTGAAACCTACAACTCCTGTTGAAACTCTTGTGTGCTGCTCTTGCCACTGAGTTTAAACAACAAC--AACAAAAAACTC--TGTGCTAATCATATAAAGAATATTTTTGT---CTGGACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817687 219 - 16982598 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------ACGTCAATTTTACATAGCAAATTAAA-CCCAGGGTAAATGTGTGTACCTGGATTCCAATAGCAGGTAAATATTCTTAATGGTGAAACCTACAACTCCTGTTGAAACTCTTGTGTGCTGCTCTTGCCACTGAGTTTA---AACAAC--AAAAAACAACTC--TGTGCTAATCATATAAAGAATATTTTTGT---CTGGACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3622326 223 - 3785965 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------ACGTCAATTTTACATAGCAAATTAAA-CCCAGGGTAAATGTGTGTACCTGGATTCCAATAGCAGGTAAATATTCTCAATGGTGAAAACTACAACTCCTGTTGAAACTCTTGTGTGCTGCTCTTGCCACTGAGTTTAAACAACAACA-AAAAAACAACTC--TGTGCTAATCATATAAAGAATATTTTTGT---CTGGACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90244255 223 - 90373283 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------ACGTCAATTTTACATAGCAAATTAAA-CCCAGGGTAAATGTGTGTACCTGGATTCCAATGGCAGGTAAATATTCTTAATGGTGAAAACTACAACTCCTGTTGAAACTCTTGTGTGCTGCTCTTGCCACTGAGTTTAAACAACAACA-AAAAAACAACTC--TGTGCTAATCATATAAAGAGTATTTTTGT---CTGGACT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5494885 223 - 5823884 CTCAACTTGCCAGCAATTTGTAAAAGAACC------------------------------------ACATCAATTTTACATAGCAAATTAAA-CCCAGGGTAAATGTGTGTACCTGGATTCCAATAGCAGGTAAATATTCTTAATGGTAAAAACTACAACTCCTGTTAAAACTCTTGTGTGCTGCTCTTGCCACTGAGTTTAAACAACAACA-AAAAAACAACTC--TGTGCTAATCATATAAAGAATATTTTTGT---CTGGACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58144971 223 + 159171411 CTCAGCTTGCCAGCAATTTGTGAAAGAACC------------------------------------AAGTCAATTTTACATAGCAAATTAAA-CTCAGGGTAAATGTGTGTACATGGATTTCAATAGTAGGTAAATATTCTTAATGGTGAAAAGTAAAACTTCTGTTAAAACTCTTGTGTGCTGTTCTTGCCACTGAGTTTA---AACAACAAGAAAAACAAGTCTGTGTGCTAATGGTGTAAAGAGCGCTTCTGT---CTAGACT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16209892 226 + 16356641 CTCAGCTTGCCAGCAATTTGTAAAAGAACC------------------------------------AAGTCAATTTTAAACAGCAAATTAAA-CTCAGGGTAAATGTGTGTACATGGATTTCAATAGTAGGTATATATTCTTAATGGTGAAAAGTAAAACTTCTGTTAAAACTCTTGTATGCTGTTCTTGCCACTGAGTTTAAACAACAACAAGAAAAACAACTCTGTGTGCTAATGGTATAAAGAGTGTTTTTGT---CTGAACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1072079 225 + 1231380 CTCAGCTTGCCAGCAATTTGTAAAAGAACC------------------------------------AAATCAATTTTACACAGCAAATTAGA-CTCGGGGTAAATGTGTGTACATGGATTTCAATAGTAAGTAAATATTCTTAATGGTG-AAAGTAAAACTTCTGTTAAAATTCTTGTGTGCTGTTCTTGCCACCAAGTTTAAACAACAACAGGAAAAACAACTCTGTGTGCTAATGGTATAGAAAGCATTTTTGT---CTGGACT i cebCap1.NW_016107870v1 C 0 I 29 s aotNan1.NW_018500483v1 2611110 223 + 11732439 CTCAGCTTGCCAGCAATTTGTAAAAGAACC------------------------------------AAGTCAATTTTACATAGCAAATTAAA-CTCAGGGTAAATGTGTGTACATGGATTTCAATAGTAGGTAAATATTCTTAATGGTGAAAAGTAAAACTTCTGTTAAAACTCTTGTGTGCTGTTCTTGCCACTGAGTTTA---AACAAGAAGAAGAACAACTCTGTGTGCTAATGGTACAAAGAGCGTTTTTGT---CTGGACT i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 187029 208 - 397369 CTCAACTTGCCAGTTATTTGTAAAaaaaacaaaaacaaaaacaaaaacaaactaaaacaaaaaaaaaaGTCAATTCTACACAGC-AATTAAA-CCCACGGTAAATGTGTGTACCTGGGTTTAGACTGGAGGCAAATATCCTTAATGGTGAAAATTAAAACTTCCATTAGAAC-------------------------------------------------------TCTGCTAATCTTATGGGGAACATTTGTGTTCATTGAAT- i dasNov3.JH569290 I 3224 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e otoGar3.GL873542 22775505 5355 + 22939663 I a score=148140.000000 s hg38.chr20_KI270870v1_alt 26403 33 + 183433 GTCTACGGCCAAg-ttctccaccctggatgtgca- s panTro5.chr20 66358238 33 + 66533130 GTCTACGGCCAAg-ttctccaccctggatgtgca- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037039 33 + 62195757 GTCTACGGCCAAg-ttctccaccctggatgtgca- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426716 33 - 578057 GTCTACGGCCATg-ttctccaccctggatgtgca- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109951731 32 - 110113093 ATCCACGGCCACg-ttctcca-cctggatgtgca- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92681481 33 - 92844088 ATCTACGGCCATg-ttctccaccctggatgtgca- i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96343577 33 + 96509753 ATCTACGGCCATg-ttctccaccctggatgtgca- i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16817906 33 - 16982598 GTCTACGGCCATg-ttctccaccctggatgtgca- i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3622549 33 - 3785965 ATCTACGGCCATg-ttctccaccctggatgtgca- i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90244478 33 - 90373283 ATCTACGGCCGTg-ttctccaccctgggtgtgca- i chlSab2.chr2 C 0 I 1 s colAng1.NW_012114444v1 5495108 33 - 5823884 ATCTATGGCCATg-ttctccaccctggacgtgca- i colAng1.NW_012114444v1 C 0 I 6 s calJac3.chr5 58145194 13 + 159171411 --------------------ACCCCGGAC-TGCG- i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16210118 14 + 16356641 --------------------accctggatgtgcg- i saiBol1.JH378156 C 0 I 1 s aotNan1.NW_018500483v1 2611333 14 + 11732439 --------------------accctggatgtgtg- i aotNan1.NW_018500483v1 C 0 I 1 s dasNov3.JH569290 187237 35 - 397369 ATTTGTGTGTgtgattctccatcttaaatgcaggt i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1072304 29 + 1231380 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=34344.000000 s hg38.chr20_KI270870v1_alt 26436 6 + 183433 cagaat s panTro5.chr20 66358271 6 + 66533130 cagaat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037072 6 + 62195757 cagaat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426749 6 - 578057 cagaat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109951763 6 - 110113093 cagaat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92681515 6 - 92844088 tagaat i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96343611 6 + 96509753 tagaat i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16817940 6 - 16982598 tagaat i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3622583 6 - 3785965 tagaat i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90244512 6 - 90373283 tagaat i chlSab2.chr2 I 1 C 0 s calJac3.chr5 58145208 6 + 159171411 CCgaat i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16210133 6 + 16356641 tcgaat i saiBol1.JH378156 I 1 C 0 s aotNan1.NW_018500483v1 2611348 6 + 11732439 gcgaat i aotNan1.NW_018500483v1 I 1 C 0 s dasNov3.JH569290 187272 6 - 397369 taaaat i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5495141 6 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1072304 29 + 1231380 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=54911.000000 s hg38.chr20_KI270870v1_alt 26442 7 + 183433 cccctgg s panTro5.chr20 66358277 7 + 66533130 cccctgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037078 7 + 62195757 cccctgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426755 6 - 578057 -ccctgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109951769 6 - 110113093 -ccccgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92681521 7 - 92844088 cccctgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96343617 7 + 96509753 cccctgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817946 7 - 16982598 cccctgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3622589 7 - 3785965 cccctgg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90244518 7 - 90373283 cccccgg i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5495147 7 - 5823884 cccctgg i colAng1.NW_012114444v1 I 6 C 0 s calJac3.chr5 58145214 6 + 159171411 -ccctgg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16210139 6 + 16356641 -ccccag i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2611354 6 + 11732439 -ccccgg i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 187278 7 - 397369 cacctgg i dasNov3.JH569290 C 0 I 2633 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1072304 29 + 1231380 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=-6981.000000 s hg38.chr20_KI270870v1_alt 26449 3 + 183433 gga- s panTro5.chr20 66358284 3 + 66533130 gga- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037085 3 + 62195757 gga- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426761 3 - 578057 gga- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109951775 3 - 110113093 gca- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92681528 3 - 92844088 gTA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96343624 3 + 96509753 gta- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817953 3 - 16982598 gTA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3622596 3 - 3785965 gta- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90244525 3 - 90373283 gtg- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5495154 3 - 5823884 gta- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58145220 4 + 159171411 ggag i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16210145 4 + 16356641 ggtg i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2611360 1 + 11732439 a--- i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e cebCap1.NW_016107870v1 1072304 29 + 1231380 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=2749776.000000 s hg38.chr20_KI270870v1_alt 26452 346 + 183433 cttcaggagctcactggagctggttccacccccatgcccaggctctgatgtgcttggtctgggctggggcctgggcaccagtgttgtcctagttttgtgttgctatgaaggaatatctgaggctgggtaatttctt-tttctttttcctaggtgaggag-aagg-atagaggctgggccattataaagaaaagaggtttgtttggctcacggttctgcagggtgtacgggaagcacggtgccggcacctgcttctggggaggcctcagggagcgtgcactcatggcgggaggtgtctcatggtaagagaagaggcgagagagaggggcgatgccaggattttttt--aaaa--- s panTro5.chr20 66358287 345 + 66533130 cttcaggagctcactggagctggttccacccccatgcccaggctctgatgtgcttggtctgggctggggcctgggcaccagtattgtcctagttttgtgttgctatgaaggaatatctgaggctgggtaatttctt-tttctttttcctaggtgagggg-aagg-atagaggctgggtcattataaagaaaagaggtttgtttggctcacggttctgcaggctgtacgggaagcacggtgccggcacctgcttctggggaggcctcatggagcgtgcactcatggcgggaggtgtctcatggtaagagaagaggtgagagagaggggcgatgccagg-ctttttt--aaaa--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037088 345 + 62195757 cttcaggagctcactggagctggttccacccccatgcccaggctctgatgtgcttggtctgggctggggcctgggcaccagtattgtcctagttttgtgttgctatgaaggaatatctgaggctgggtaatttctt-tttctttttcctaggtgagggg-aagg-atagaggctgggtcattataaagaaaagaggtttgtttggctcacggttctgcaggctgtacgggaagcacggtgccggcacctgcttctggggaggcctcagggagcgtgcactcatggcgggaggtgtctcatggtaagagaagaggtgagagagaggggcgatgccagg-ctttttt--aaaa--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 426764 345 - 578057 cttcaggagctcgctggagctggttccacccccatgcccaggctctgatgtgcttggtctgggttggggcctgggcaccagtgttgtcctagttttgtgttgctatgaaggaatatctgaggctgggtaatttctt-tttctttttcctaggtgaggag-aagg-atagaggctgggtcattataaagaaaagaggtttgtttggctcacggttctgcaggctgtacgggaagcgcggtgccggcacctgcttctggggaggcctcagggagcgtgcactcatggcgggaggtgtctcatggtaagagaagaggcgagagagaggggagatgccagg-ctttttt--aaaa--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109951778 345 - 110113093 cttcaggagctcactggagctggctccacccccatgcccaggctctgatgtgcttggtctggattggggcctgggcaccagtattgtcctagttttgtgttgctatgaaggaatatctgaggctgggaaatttctt-tttctttctcctaggtgaggag-aagg-atagaggctgggtcattataaagaaaagaggtttgtttggctcccggttctgcaggctgtacaggaagcgcggtgccagcccctgcttctggggaggcctcagggagcgtgcactcatggcgggaggtgtctcatggtaagagaagaggcgagagagaggggagatgccagg-ctttttt--aaaa--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92681531 342 - 92844088 CTTCAGGAGCTCACTAGAGCTGGCTCCACCCCCATGCCCAGGCTCTGATGTGCTCGGTCTGGGCTGGAGTGTTGGCACCAATATtgtcctagttttgtgttgctatgaaggaatatctgaggctgggtaatttctt-tttctttttcctaggtgaggagcaagg-atagaggctgggtcatgat----agaagaggtttgtttggctcacagttctgcaggctgtatgggaaacatggtgccgacatctgcttctggggaggcctcagggagctttcactcatggtgggaggtgcctgagggtaagagaagaggcgagagagaggggagatgccagg-ctttttt--aaaa--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96343627 342 + 96509753 cttcaggagctcactagagctggctccacccccatgcccaggctctgatgtgctcggtctgggctggagtcttggcaccaatattGTCCTAattttgtgttgctatgaaggaatatctgaggctgggtaatttCTT-TTTCTTTTTCCTAGGTGAGGAGCAAGG-ATAgaggctgggtcatgat----agaagaggtttgtttggctcacagttctgcaggctgtacgggaaacatggtgccgacatctgcttctggggaggcctcagggagctttcactcatggtgggaggtgcctgagggtaagagaagaggcgagagagaggggagatgccagg-ctttttt--aaaa--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16817956 342 - 16982598 CTTCAGGAGCTCACTAGAGCTGGCTCCACCCCCATGCCCAGGCTCTGATGTGCTCGGTCTGGGCTGGAGTCTTGGCACCAATATtgtcctagttttgtgttgctatgaaggaatatctgaggctgggtaatttctt-tttctttttcctaggtgaggagcaagg-atagaggctgggtcatgat----agaagaggtttgtttggctcacagttctgcatgctgtacgggaaacatggtgccgacctctgcttctggggaggcctcagggagctttcactcatggtgggaggtgcctgagggtaagagaagaggtgagagagaggggagatgccagg-cttttta--aaaa--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3622599 342 - 3785965 cttcaggagctcactggagctggctccacccccacgcccaggctctgatgtgcttggtcagggttggagtcttggcaccaatattgtcctagttttgtgttgctatgaaggaatatctgaggctgggtaatttctt-tttctttgtcctaggtgaggagcaagg-atagaggctgggtcatgat----aaaagacgtttgtttggctcacagttctgcaggctgtacgggaaacatggtgccgacatctgcttctggggaggcctcagggagctttcactcatggcgggaggtgcctgagggtaagagaagaggcgagagagaggggagatgccagg-ctttttt--aaaa--- i cerAty1.NW_012001373v1 C 0 I 333 s chlSab2.chr2 90244528 341 - 90373283 cttcaggagctca-tagagctggctccacccccatgcccaggctctgatgtgcttggtctgggttggagtcttggcaccaatattgtcctagttttgtgttgctatgaaggaatatctgaggctgggtaatttctt-tttctttttcctaggtgaggagcaagg-atagaggctgggtcatgat----aaaagaggtttgtttggctcacagttctgcaggctgtacgggaaacatggtgccgacatctgcttctggggaggcctcagggagctttcactcatggcgggaggtgcctgatggtaagagaagaggcgagagagaggggagatgccagg-tttttaa--aaaa--- i chlSab2.chr2 C 0 I 329 s colAng1.NW_012114444v1 5495157 342 - 5823884 cttcgggagcccactagagctggctccacccccatgcccaggctctgatgtgcttggtctgggttggagtctgggcaccaatattgtcctagttttgtgttgctatgaaggaatatctgaggctgggtaatttctt-tttctttttcctaggtgaggagcaagg-ataaaggctgggtcatgat----aaaagaggtttgtttggctcacggttctgcagggtgtacgggaaacatggtgccggcatctgcttctggggaggcctcagggagctttcactcatggcgggaggtgcctgatggtaagagaagaggcgagagagaggggagatgccaga-ctttttt--aaaa--- i colAng1.NW_012114444v1 C 0 I 337 s calJac3.chr5 58145224 348 + 159171411 cttcaggagctcactggagctggctcca-ccccatgcccaggctctgacatgcttagtctgggttggggcctgggcaccaacactgtcttagttttgtgttgctgtgaagaaatacctgaggctggataatttggc-tttctttttcctgggtgaggagctagg-atagaggctgggtcactgtaaaggaaagaggtttgtttgactcacggttctgcaggctgtacaggaagcatggtgccagcatctgcttctgagaaagcctccgggagctttcactcatggcagaaggtgtctcatggtgagagcagaggtgagagagaggggacatgacagg-ctttatt--aaaaaaa i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16210149 349 + 16356641 cttcaggagctcactggggctggctccgcccccatgcccaggctctgacatgcttagtctgggttggggcttgggcaccaacactgtcttagttttgtgttgctatgaagaaatacctgaggctgggtaattttgcttttctttttcctgggtggggagctggg-atagaggctgggtcactgtaaaggaaagaggtttgtttgattcatggtgctgcaggctgtacaggtagcatggtgccagcatctgcttctgagaaagcctcagggagctttcgctcatggcagaaggtgtttcatggtgagagcagaggtgacagagaggggagataacagg-cttt-tt--aaaaaaa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1072333 347 + 1231380 ctgtaggagctcgctggggctggctccgcccccatgcccaggctctgacatgcttagtctgggttggggcctgggcaccaacgctgtcttagttttgtgttgctatgaagaaatacctgaggctgggtaattttgcttttctatttcctgggtgaggagctgggaatagaggctgggtcatcgtaaaggaaggaggtttgtctgacttacagttctgcaggctgtgcaggaagcatggtgccagcatctgcttctgagaaagcctcagggagctttcactcctggcagaaagtgtctcatggtgagagcagag-----agagaggggagatgacagc-cttt-tttaaaaaaaa i cebCap1.NW_016107870v1 I 29 C 0 s aotNan1.NW_018500483v1 2611361 323 + 11732439 -ttcaggagctcactggagctggctccacccccatgcccaggctctgacatgcttagtctgggctggggcctgggtaccaatactgccttagttttgtgttgctatgaagaaatacctgaggctgggtaattttgcttttctttttcctgggtgaggagctggg-atagaggctgggtcactgtagaggaaacaggtttgtttgcctcgcagttctgcaggccgtacaggaatcacagtgccagcgtctgcttccgaggaggcctcagggagctttcactcatggcagagag--------------------------agagaggggagatgacagg-ctttttt--aaaaaaa i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e otoGar3.GL873542 22775505 5355 + 22939663 I a score=76168.000000 s hg38.chr20_KI270870v1_alt 26798 8 + 183433 caaccagc s panTro5.chr20 66358632 8 + 66533130 caaccagc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037433 8 + 62195757 caaccagc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 427109 8 - 578057 caaccagc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109952123 8 - 110113093 caaccagc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92681873 8 - 92844088 caaccagc i rheMac8.chr10 C 0 I 2859 s macFas5.chr10 96343969 8 + 96509753 caaccagc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16818298 8 - 16982598 caaccagc i macNem1.NW_012014244v1 C 0 I 870 s cerAty1.NW_012001373v1 3623274 8 - 3785965 caaccagc i cerAty1.NW_012001373v1 I 333 C 0 s chlSab2.chr2 90245198 8 - 90373283 caaccagc i chlSab2.chr2 I 329 C 0 s colAng1.NW_012114444v1 5495836 8 - 5823884 caaccagc i colAng1.NW_012114444v1 I 337 C 0 s calJac3.chr5 58145572 8 + 159171411 taaccagc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16210498 8 + 16356641 caaccagc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1072680 8 + 1231380 cagccagc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2611684 8 + 11732439 cagccagc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e otoGar3.GL873542 22775505 5355 + 22939663 I a score=13434.000000 s hg38.chr20_KI270870v1_alt 26806 2 + 183433 tc s panTro5.chr20 66358640 2 + 66533130 tc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037441 2 + 62195757 tc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 427117 2 - 578057 tc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109952131 2 - 110113093 tc i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96343977 2 + 96509753 cc i macFas5.chr10 C 0 I 1360 s cerAty1.NW_012001373v1 3623282 2 - 3785965 tc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90245206 2 - 90373283 tc i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5495844 2 - 5823884 tc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58145580 2 + 159171411 tc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16210506 2 + 16356641 tc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1072688 2 + 1231380 tc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2611692 2 + 11732439 tc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16818306 870 - 16982598 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=816010.000000 s hg38.chr20_KI270870v1_alt 26808 164 + 183433 gtgtgggaactaatagagcaagaactcactcatcaccatgaggagggcactaaaccattcattctggatccttccctatgacccgaacacctcccaccaggccccgcctccaacatcggggattaaatttcaacatgaggttcggggacaaacgtccaaactat s panTro5.chr20 66358642 164 + 66533130 gtgtgggaactaatagagcaagaactcactcatcaccatgaggagggcactaaaccattcattctggatccttccctatgaccccaacacctcccaccaggccccgcctccaacatcggggattaaatttcaacatgaggttcggggacaaacgtccaaactat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037443 164 + 62195757 gtgtgggaactaatagagcaagaactcactcatcaccatgaggagggcactaaaccattcattctggatccttccctatgaccccaacacctcccaccaggccccgcctccaacatcggggattaaatttcaacatgaggttcggggacaaacgtccaaactat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 427119 164 - 578057 gtgtgggaactaatagagcaagaactcactcatcaccatgaggagggcactaaaccattcattctggatccttccctatgacccgaacacctcccaccaggccccacctccgacatcggggattaactttcaacatgaggtttggggacaaacatccaaactat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109952133 164 - 110113093 gtgtgggaactaatagagcaagaactcactcatcaccatgaggagggcactaaaccattcattctggatccttccctgtgacctgaacacctcccaccaggccccacctccaacatcggggatcaaatttcaacgtgaggttcagggacaaacatccaagctat i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3623284 164 - 3785965 tcatgggaactgatagagcaagaactcacccatcatcgtgaggagggcactaaaccattcattctggatccttccccatgacccgaacacctcccaccaggccccacctccaacatcggggaacaagtttcaacatgaggtttggggacaaacatccaaacgat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90245208 164 - 90373283 tcatgggaactgatagagcaagaactcacccatcatcgtgaggagggcactaaaccattcattctggatccttccccatgacccgaacacctcccaccaggccccacctccaacattggggaacaagtttcaacatgaggttcagggacaaacatccaaacgat i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5495846 164 - 5823884 tcatgggaactgatagagcaagagctcacccatcaccgtgaggagggcactaaaccattcattctggatccttccccatgacccgaacacctcccaccaggccccacctccaacatcggggaacaaatttcaacatgaggtttggggacaaacatccaaacgat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58145582 161 + 159171411 ttgtgggaactaatacagcaagaactcacttatcaccaagaggagggca-gaacacatttattcagggtccttcccagtgacccagacaccttccaccagggcccacctccaacattggggatcagatttcaacatgaggttt--ggacacacatccaaactat i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16210508 161 + 16356641 ttgtgggaactaatacagcaagaactcactcatcaccaagaggaagtca-gaacccattcattcggggtccttcctagtgacccagacacctcccaccagggcctacctccagcatcggggatcagatttcaacatgaggttt--ggacacacatccaaactat i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1072690 161 + 1231380 ttgtgggaacgaatacagcaagaactcactcatcaccaaaaggagggca-gaacccattcattcagggtccttcccagtgacccagacgcttcccaccagggcccaactccagcatcggggatcagatttcaacatgaggttt--ggacacacatccaaactat i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2611694 161 + 11732439 ctgtgggaactaatacagcaagaactcactcatcaccaagaggagggca-gaacccattcattcggggtccttcccggagacccagacacctcccaccagggcccacctccaacatcggggatcagatttcaacatgaggttt--ggacacacatccaaactat i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16818306 870 - 16982598 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96343979 1360 + 96509753 I a score=752077.000000 s hg38.chr20_KI270870v1_alt 26972 128 + 183433 agcaggtatttctgaagaacacccaggtgtttcaaaGCTGGGGTGAAGCCGTGGGTT-----------------------------------------------------------------AACACTGTTTTTCAGACATGGCTGGAGACCTGGGGTTCCTACACCACAGAGTCTCCCTGCC-AGAGTtctca s panTro5.chr20 66358806 128 + 66533130 agcaggtatttctgaagaacacccaggtgtttcaaaGCTGGGGTGAAGTCGTGGGTT-----------------------------------------------------------------AACACTGTTTTTCAGACATGGCTGGAGACCTGGGGTTCCTACACCACAGAGTCTCCCCGCC-AGAGTtctca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037607 128 + 62195757 agcaggtatttctgaagaacacccaggtgtttcaaaGCTGGGGTGAAGTCGTGGGTT-----------------------------------------------------------------AACACTGTTTTTCAGACATGGCTGGAGACCTGGGGTTCCTACACCACAGAGTCTCCCCGCC-AGAGTtctca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 427283 128 - 578057 agcaggtatttctgaaggacacccaggtgtttcaaaCCTGGGGTGAAGCCGTGGGTT-----------------------------------------------------------------AATACTGTTTTTCAGACATGGCTGGAGACCTGGGATTCCTACACCACAGAGTCTCCCTGCC-AGAGTtctca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109952297 128 - 110113093 agcaggtatttctgaagaaaacccaggtgtttcaaaCCTGGGGTGAAGCCATGGGTT-----------------------------------------------------------------AATACTGTTTTTCAGACACGGCTGGAGACCTAGGATTCCTACACCACAGAGCCTCCCTGCC-AGAGTtctca i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96345339 128 + 96509753 AGCAGGTGTTTTTGAAGAACACTCGGGTGTTTCAAACctggagtgaagccacgggtt-----------------------------------------------------------------aatactgtttttcagacatggctggagacctgggattcctACACCACAGAGCCTCCCTGAC-AGAGTtctca i macFas5.chr10 I 1360 C 0 s cerAty1.NW_012001373v1 3623448 128 - 3785965 agcaggtgtttttgaagaacattcgggtgttttaaacctggggtgaagccacgggtt-----------------------------------------------------------------aaTACTGTTTTTCAGACATGGCTGGAGACCTGGGGTTCCTACACCACAGAGCCTCCCTGCC-AGAGTtctca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90245372 193 - 90373283 agcaggtgcttttgaagaacactcgggtgtttcaaaCCTGGGGTGAAGCCACGGGTTAATACTGtttttctttttttttttttttNNNNNNNNNNTACAGGCTTGAGCCACCGCGCCCGGCCAATACTGTTTTTCAGACATGGCTGGAGACCTGGGATTCCTACACCACAGAGCCTCCCTGCC-AGAGTtctca i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5496010 128 - 5823884 agcaggtgtttttgaagaacaatcaggtgtttcaaacctggggtgaagccacgggtt-----------------------------------------------------------------aaTACTGTTTTTCAGACATAGCTGGAGACCTGGGATTCCTACACCACAGAGCCTCCCTGCC-AGAGTtctca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58145743 126 + 159171411 agcaggtatttctgaagaactcccaggtgtttcaaaCCTGGGCTGAAGCCACGTATT-----------------------------------------------------------------GACGCTGTTTTT--GACACGGCTGGAGACCTGAACTTTCTATACCACGGAGCCTCCCTGTC-AGCgttctca i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16210669 129 + 16356641 agcaggtatttctgaagaactctcaggtgtttcaaatctgggctgaagccacggatt-----------------------------------------------------------------gaCGCTGTTTTTCAGACATGTCTGGAGACCTGAACTTTCTACATCACGGAGCCTCCCTGTCAAGAgttttca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1072851 128 + 1231380 agcaggtatttctgaagaactccaaggtgtttcaaatctgGGCTGAAGCCACGGATT-----------------------------------------------------------------GACACTGTTTTTCAGACACGGCTGGAGACCTGAACTTTCTACACCATGGAGCCTCCCTATC-AGAgttctca i cebCap1.NW_016107870v1 C 0 I 8306 s aotNan1.NW_018500483v1 2611855 128 + 11732439 agcaggggtttctgaagagctcccaggtgtttcaaacctgggctgaagccacggatt-----------------------------------------------------------------gaCACTGTTTTTCAGACACGGCTGGAGACCTGAACTTTCTACACCACGGAGCCTTCCTGTC-AGCgttctca i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16818306 870 - 16982598 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=54802.000000 s hg38.chr20_KI270870v1_alt 27100 10 + 183433 gctcctgggg s panTro5.chr20 66358934 10 + 66533130 gctcctgggg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037735 10 + 62195757 gctcctgggg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 427411 10 - 578057 gttcctgggg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109952425 10 - 110113093 gctcctgggg i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96345467 10 + 96509753 gctcctgggg i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3623576 10 - 3785965 gctcctgggg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90245565 10 - 90373283 gctcctgggg i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5496138 10 - 5823884 gctcctgggg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58145869 10 + 159171411 actcttaggg i calJac3.chr5 C 0 I 69 s saiBol1.JH378156 16210798 10 + 16356641 actcttgggg i saiBol1.JH378156 C 0 I 5166 s aotNan1.NW_018500483v1 2611983 10 + 11732439 actcttgggg i aotNan1.NW_018500483v1 C 0 I 4670 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e macNem1.NW_012014244v1 16818306 870 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=283950.000000 s hg38.chr20_KI270870v1_alt 27110 76 + 183433 aggctgaggtgggtggatcacttgaggtcaggagtttgagatcagcctggccaacatggtgaaaccccgtctctac s panTro5.chr20 66358944 76 + 66533130 aggctgaggtgggtgaatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037745 76 + 62195757 aggctgaggtgggtgaatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 427421 76 - 578057 aggctgaggtgggtggatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109952435 76 - 110113093 aggctgaggcgggtggatcgcttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctac i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96345477 76 + 96509753 aggccgaggcgggtggatcagttgaggtcaggagttcaagaccagcctggccaacatggtgaaatcccgtctctac i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3623586 76 - 3785965 aggccgagacggctggatcagttgaggtcaggagttcaagaccagcctggccaatatggtgaaatcccgtctctac i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90245575 76 - 90373283 aagccgaggcaggtggatcagctgaggtcaggagttcgagaccagcctggccaacatggtgaaatcctgtctctac i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5496148 76 - 5823884 aggccgaggtgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctac i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58145948 74 + 159171411 aggccgaggcgagtggatcac--gaggtcgagagatcgagaccatcctggccaacatggtgaaaccccgtctctac i calJac3.chr5 I 69 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16818306 870 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=537756.000000 s hg38.chr20_KI270870v1_alt 27186 126 + 183433 taaaaataca-aaaaatgtagccaggcgtggtggcacacacctgtaattccagctactcaggaggctgaggcacgagaatcacttgatcctgggaggcggaggttgcagtgagctgagatctcacta s panTro5.chr20 66359020 126 + 66533130 taaaaataca-aaaaatgtagccaggcgtggtggcacacacctgtaattccagctactcaggaggctgaggcacgagaatcacttgatcctgggaggcggaggttgcggtgagctgagatctcacta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037821 126 + 62195757 taaaaataca-aaaaatgtagccaggcgtggtggcacacacctgtaattccagctactcaggaggctgaggcacgagaatcacttgatcctgggaggcggaggttgcggtgagctgagatctcacta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 427497 126 - 578057 taaaaataca-aaaaaagtagccaggcgtggtggcacacacctgtaattccagctactcaggaggctgaggcacgagaatcacttggtcttgggaggcggaggttgcagtgagctgagatctcacta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109952511 125 - 110113093 taaaaataca-aaaaa-gtagccaggcgtggtggcgcacacctgtaattccagctactcgggaggctgaggcacgagaatcacttgaacctgggaggcggaggttgcagtgagcagagatctcacta i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96345553 126 + 96509753 taaaaataca-aaaaaattagctgggcgtggtggcgcacacctgtaattccagctacccaggaggctgaggcacaagaatcacttgaacctgggaggaggaggttgcagtgagctgagatctcacta i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16819176 126 - 16982598 taaaaataca-aaaaaattagctgggcgtggtggcgcacacctgtaattccagctacccaggaggctgaggcacaagaatcacttgaacatgggaggaggaggttgcagtgagctgagatctcacta i macNem1.NW_012014244v1 I 870 C 0 s cerAty1.NW_012001373v1 3623662 126 - 3785965 taaaaataca-aaaaaattagctgggcgtggtggcgcacacctgtaattccagctacccaggaggctgaggcacaagaatcacttgaacctgggaggaggaggttgcagtgagctgagatctcacta i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90245651 126 - 90373283 tgaaaataca-aaaaaattagctgggcgtggtggcgcacacctgtaattctagctacccaggaggctgaggcacaagaatcacttgaacctgggaggaggaggttgcagtgagctgagatctcacta i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5496224 127 - 5823884 taaaaaagtacaaaaaactagccgggcgaggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtaaacccgggaggcggagcttgcagtgagctgagatccggcca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58146022 124 + 159171411 taaaaataca-aaaa--ttagctgggcgtggtggcgtgcgcctgtagtcccagatacccaggaggctgaggcaggagaattgtttgaacctgggaggcagaggttgcagtgagtcgagattgtgcca i calJac3.chr5 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 145338 6575 + 156971 M e saiBol1.JH378156 16210808 5166 + 16356641 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=225108.000000 s hg38.chr20_KI270870v1_alt 27312 61 + 183433 ctgcactccagcctg------ggtgacggagtgagacactgtc-------aaaaaaaaaaaaaaaaagaaagaa s panTro5.chr20 66359146 56 + 66533130 ctgcactccagcctg------ggtgatggagtgagacactgtc-------aaaaaaaaaaaaaaaaa-----aa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62037947 57 + 62195757 ctgcactccagcctg------ggtgatggagtgagacactgtc-------aaaaaaaaaaaaaaaag----aaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 427623 59 - 578057 ctgcactccagcctg------ggtgacggagtgagacactgtc-------aaaaaaaaaaaaaaaaa--aaaaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109952636 54 - 110113093 ctgcactccagcctg------ggtgacggagtgagacactgtc-------aaaacaaaagaaaaaga------- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96345679 61 + 96509753 ctgcactccagcctg------ggtgatggaatgagacattgtcaaaaaaaaaaaaaaaaaagaaaaa------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16819302 55 - 16982598 ctgcactccagcctg------ggtgatggaatgagacattgtc------Aaaaaagaaaaagaaaaa------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3623788 54 - 3785965 ctgcactccagcctg------ggtgacggagtgagacattgtc-------aaaaaaaaaaagaaaaa------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90245777 48 - 90373283 ctgcactccagcctg------ggtgacggagtgagacattgtc-------aaaaaa------aaaaa------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 151913 54 + 156971 ctgcactccagcctg------ggtgacggagtgagacattgtc-------aaaaaaaaaaagaaaaa------- i manLeu1.NW_012101369v1 M 6575 C 0 s colAng1.NW_012114444v1 5496351 44 - 5823884 ctgcactccagcctg------ggcgacagagcaagactccgtc-------tccaaaa----------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58146146 67 + 159171411 ctgcactccagcttggtgcctggtgacagagtgagactctgtctcaaaaaaaaaaaaaaaaaaagaa------- i calJac3.chr5 C 0 I 4988 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e saiBol1.JH378156 16210808 5166 + 16356641 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=2881733.000000 s hg38.chr20_KI270870v1_alt 27373 626 + 183433 gaaagaGAAGTATCATGATAAAAGAAATAATATTTTAAAAAaagacagtgtggtatttgcatcaagatagacagatcaatagaacaaattagagataccagaaatagacccacaaatatgagcaagtgattttcaacaaagctgcaaaggcaattcaataaaggcaagttttgttctcagtaaatgatgctaaacagttggatatccatatgcaaaaaaatgaactttgatccataccttgtactatattaaaatatt--gtcaatatggatcataaacctaaatgtaaaagctaaaattataaaacttctataagaggacatagaagaaaacctttgcaaacttagatcaggcaaaacattattagataggatatcaaaacataatccatcaaataaataagatgtttcatcaaaactaagaacttctgctattccaaagacactgctaaga---------aaatgaaaagacaagcccaaggctgtaagacaatttttgcaaatcacatatttgataaaggacttgtatccagagtatatcaagaactctcaaaactcaataACgttaatggaaaaaaacagattctgtaaaatattttaaagaggtttattctgagtcaatatgaatgaccatg s panTro5.chr20 66359202 626 + 66533130 gaaaaagaaGTATCATGATAAAAGAAATAATATTTTAAAAAaagacagtgtggtatttgcatcaagatagacagatcaatagaacaaattagagataccagaaatagacccacaaatatgagcaagtgattttcaacaaagctgcaaaagcaattcaataaaggcaagttttgttctcagtaaatgatgctaaacagttggatatccatatgcaaaaaaatgaactttgatccataccttgtactatattaaaatatt--gtcaatatggatcataaacctaaatgtaaaagctaaaattataaaacttctataagaggacatagaagaaaatgtttgcaaacttagatcaggcaaagcattattagataggatatcaaaacataatccatcaaataaataagatgtttcatcaaaactaataacttctgctcttccaaagacactgctaaga---------aaatgaaaagacaagcccaaggctgtaagaaaatttttgcaaatcacatatttgataaaggacttgtatccagagtatatcaagaactctcaaaactcaataACgttaatggaaaaaaacagattctgtaaaatattttaaagaggtttattctgagtcaatatgaatgaccatg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038004 626 + 62195757 acgaaagaaGTATCATGATAAAAGAAATAATATTTAAAAAAaagacagtgtggtatttgcatcaagatagacagatcaatagaacaaattagagataccagaaatagacccacaaatatgagcaagtgattttcaacaaagctgcaaaagcaattcaataaaggcaagttttgttctcagtaaatgatgctaaacagttggatatccatatgcaaaaaaatgaactttgatccataccttgtactatattaaaatatt--gtcaatatggatcataaacctaaatgtaaaagctaaaattataaaacttctataagaggacatagaagaaaacgtttgcaaacttagatcaggcaaagcattattagataggatatcaaaacataatccatcaaataaataagatgtttcatcaaaactaataacttctgctcttccaaagacactgctaaga---------aaatgaaaagacaagcccaaggctgtaagaaaatttttgcaaatcacatatttgataaaggacttgtatccagagtatatcaagaactctcaaaactcaataACgttaatggaaaaaaacagattctgtaaaatattttaaagaggtttattctgagtcaatatgaatgaccatg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 427682 626 - 578057 gaaaaagaAGTATCATGATAAAAGAAATAATATTTTTAAAAaagacagtgtggtatttgcatcaagatagacagatcaatagaacaaattagagataccagaaatagacccacaaatatgagcaagtgattttcaacaaagctgcaaaggcaattcaataaaggcaagttttgttctcagtaaatgatgctaaacagttggatatccatatgcaaaaaaatgaactttgatccataccttgtgctatattaaaatatt--gtcaatatggatcataaacctaaatgtaaaagctaaaattataaaacttatataagaggacatagaagaaaacctttgcaaacttagatcaggcaaagcattattagataggatatcaaaacataatccatcaaataaataagatgtttcatcaaaactaagaacttctgctcttccaaagacactgctaaga---------aaatgaaaagacaagccgaaggctgtaaggaaatttttgcaaatcacatatttgataaaggacttgtatccagagtatatcaagaactctcaaaactcaataACgttaatggaaaaaaacagattctgtaaaatattttaaagaggtttattctgagtcaatatgaatgaccatg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109952690 616 - 110113093 --------aGTATCATGATAAAAGAAATAACATTTT-AAAAaagac--tgtggtatttgcctcaagatagacagatcaatagaacaaattagagagaccagaaatagacccacaaatataagcaagtgattttcaacaaaggtgcaaaggcaattcaataaaggccagttttgttctcagtaaatgatatttaacagttggatatccatatgcaaaaaaatgaactttgatccataccttgcactatattaaaatattaagtcaatatggatcataaacctaaatgcaaaacctaaaattataaaacttctataataggacataggagaaaacctttgcaaacttagatcaggtaaagcattattagatagggtatcaaaacataatccatcaaataaataagatgtttcatcaaaactaagaacttctgctcttccaaagacactgctaaga---------aaatgaaaagacaagccc-aggctgtaagaaaatttttgcaaatcacatatttgataaaggacttgtatccagagtatatcaagaactctcaaaactcaataACgttaatggaaaaaaacagactctgtaaaatattttaaagaggtttattctgagtcaatatgaatgaccatg i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96345740 634 + 96509753 gaaaaagaaGTATCATGATAAAAGAAATAACATTTTTTAAAaagacagtgtggtatttgcatcaagatagacagatcaatagaacaaattacagagaccagaaatagacccacaaatgtgagcaactgattttcaacagagatgcaaaagcaattcaataaaggcaagttttgttatcggtaaatgatgctaaacagttggatatccatatgc-aaaaaatgaactttgatccatactttgtactatattaaaatattaagtcaacatggatcataaacctaaatgtaaaacctaaaattataaaacttctataagaggacataggagaaaacctttgcaaacttagatcaggcaaagcattattagataggatatcaaaacataatccatcaaataaataagttgtttcatcaaaatgaagaacttctgctcttccaaagacactgctaagaaaatgaagaaaatgaaaatacaagcccaaggctgtaagaaaatttttgcaaatcacatatttgataaaggacttgtatcaagaatatatcaagaactctcaaaactcaataAtgttaatggagaaaaac--actctgtaaaatattttaaagaggttttttctgagtcaatatgagtgaccatg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16819357 634 - 16982598 gaaaaagaaGTATCATGATAAAAGAAATAACATTTTTTAAAaagacagtgtggtatttgcatcaagatagacagatcaatagaacaaattacagagaccagaaatagacccacaaatgtgagcaactgattttcaacagagatgcaaaagcaattcaataaaggcgagttttgttatcggtaaatgatgctaaacagttggatatccatatgc-aaaaaatgaactttgatccatactttgtactatattaaaatattaagtcaacatggatcataaacctaaatgtaaaacctaaaattataaaacttctataagaggacataggagaaaacctttgcaaacttagatcaggcaaagcattattagataggatatcaaaacataatccatcaaataaataagttgtttcatcaaaatgaagaacttctgctcttccaaagacactgctaagaaaatgaagaaaatgaaaatacaagcccaaggctgtaagaaaatttttgcaaatcacatatttgataaaggacttgtatcgagaatatatcaagaactctcaaaactcaataAtgttaatggagaaaaac--actctgtaaaatattttaaagaggttttttctgagtcaatatgagtgaccatg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3623842 635 - 3785965 gaaaaagaaGTATCATGATAAAAGAAATAACATTTTTAAAAaagacagtgtggtatttgcatcaagatagacaaatcaatagaacaaattacagagaccagaaatagacccacaaatgtgagcaactgattttcaacagagatgcaaaagcaattcaataaaggcaagttttgttatcggtaaatgatgctaaacagttggatatccatatgcaaaaaaatgaactttgatccatactttgtactatattaaaatattaagtcaacatggatcataaacctaaatgtaaaacctaaaattataaaacttctataagaggacataggagaaaacctttgcaaacttagatcaggcaaagcattattagataggatatcaaaacataatccatcaaataaataagttgtttcatcaaaatgaagaacttctgctcttccaaagacactgctaagaaaatgaagaaaatgaaaatataagcccaaggctgtaagaaaagttttgcaaatcacatatttgataaaggacttgtatcgagaatatatcaagaactctcaaaactcaataAtgttaatggagaaaaac--actctgtaaaatattttaaagaggttttttctgagtcaatatgagtgaccatg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90245825 632 - 90373283 gaaaaagaaGTATCATGATAAAAGAAATAACATTTTTTAAAaagacggtgtggtatttgcatcaagatagacagatcaatagaacaaattacagagaccagaaatagacccacaaatatgagcaactgattttcaacagagatgcaaaagcaattcaataaaggcaagttttgttatcggtaaatgatgctaaacagttggatatccatatgc-aaaaaatgaactttgatccatactttgtactatattaaaatattaagtcaacatggatcataaacctaaatgtaaaacctaaaattataaaacttctataagaggacataggagaaaacctttgcaaacttagatcaggcaaagcattattagatagggtatcaaaacataatccatcaaataaataagttgtttcatcaaaatgaagaacttctgctcttccaaagacactgctaagaaaatgaagaaaatgaaaatacaagcccaaggctgtaagaaaatttttgcaaatcacatatttgataaaggacttgtattgaga--atatcaagaactctcaaaactcaataAtgttaatggagaaaaac--actctgtaaaatattttaaagaggttttttctgagtcaatatgagtgaccatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 151967 634 + 156971 gaaaaAGAAGTATCATGATAAAAGAAATAACATTTTTTAAAaagacagtgtggtatttgcatcaagatagacagatcaatagaacaaattacagagaccagaaatagacccacaaatgtgagcaactgattttcaacagagatgcaaaagcaattcaataaaggcaagttttgttatcggtaaatgatgctaaacagttggatatccatatgc-aaaaaatgaactttgatccatactttgtactatattaaaatattaagtcaacatggatcataaacctaaatgtaaaacctaaaattataaaacttctataagaggacataggagaaaacctttgcaaacttagatcaggcaaagcattattagataggatatcaaaacataatccatcaaataaataagttgtttcatcaaaatgaagaacttctgctcttccaaagacactgctaagaaaatgaagaaaatgaaaatacaagcccagggctgtaagaaaatttttgcaaatcacatatttgataaaggacttgtatcgagaatatatcaagaactctcaaaactcaataAtgttaatggagaaaaac--actctgtaaaatattttaaagaggttttttctgagtcaatatgagtgaccatg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5496395 593 - 5823884 --------------------------------------aaaaagaCAgtgtggtatttgcatcaagatagacagatcaagagaacaaattagagagaccagaaatagacccacaaatatgagcaactgattttcaacaaaggtgcaaaggcaattcaataaaggcaagttttgttatcggtaaatgatgctaaacagttggatatccatatgc-aaaaaatgaactttgatccatactttgtactatattaaaatattaagtcagcatggatcataagcctaaatgtaaaacctaaaattataaaacttctataagaggacataggagaaaacctttgcaaacttagatcaggcaaagcattattagataggatatcaaaacataatccatcaaataaataaattgtttcatcaaaattaagaa---ctgctcttccaaagacactgctaagaaaatgaaggaaatgaaaatacaagcccaaggctgtaagaaaatttttgcgaatcacgtatttgataaaggacttgcatcgagaatatatcaagaactctcagaactcaataAtgttaatggagaaaaac--actctgtaaaatatttcaaagaggttttttctgagtcagtatgagtgaccatg i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e saiBol1.JH378156 16210808 5166 + 16356641 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=141246.000000 s hg38.chr20_KI270870v1_alt 27999 36 + 183433 gcctggagaaaacagtttcgagaggttctgagaaAG s panTro5.chr20 66359828 36 + 66533130 gcctggagaaaacagtttcgagaggttctgagaaAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038630 36 + 62195757 gcctggagaaaacagtttcgagaggttctgagaaAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428308 36 - 578057 gcctgcagaaaacagttttgagaggttctgagaaAG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96346374 36 + 96509753 gcctggagaacacagtttcgagaggtcctgagaaag i macFas5.chr10 C 0 I 1139 s macNem1.NW_012014244v1 16819991 36 - 16982598 gcctggagaacacagtttcgagaggtcctgagaaag i macNem1.NW_012014244v1 C 0 I 1134 s cerAty1.NW_012001373v1 3624477 36 - 3785965 gcctggagaacacagtttcgagaggtcctgagaaag i cerAty1.NW_012001373v1 C 0 I 805 s chlSab2.chr2 90246457 36 - 90373283 gcctggagaacacagtttcgagaggtcctgagaaag i chlSab2.chr2 C 0 I 1169 s manLeu1.NW_012101369v1 152601 36 + 156971 gcctggagaacacagtttcgagaggtcctgagaaag i manLeu1.NW_012101369v1 C 0 I 1138 s colAng1.NW_012114444v1 5496988 36 - 5823884 gcctggagaacacagtttcaggaggtcctgagaaag i colAng1.NW_012114444v1 C 0 I 1311 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e saiBol1.JH378156 16210808 5166 + 16356641 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=12287.000000 s hg38.chr20_KI270870v1_alt 28035 23 + 183433 CCTGGAGAACACAGTTTCGAGTT s panTro5.chr20 66359864 23 + 66533130 ACTGGAGAACACAGTTTCGAGTT i panTro5.chr20 C 0 I 34 s panPan2.chr20 62038666 23 + 62195757 ACTGGAGAACACAGTTTCGAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428344 23 - 578057 CCTGGAGAACACAGTTTCGAGTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=16501.000000 s hg38.chr20_KI270870v1_alt 28058 33 + 183433 TCCTGAGAAAGCCTGGAGAACA--GTTTCGAGAGG s panTro5.chr20 66359921 35 + 66533130 TCCTGAGAAAGTCTGGAGAACACAGTTTCGAGAGG i panTro5.chr20 I 34 T 69 s panPan2.chr20 62038689 35 + 62195757 TCCTGAGAAAGCCTGGAGAACACAGTTTTGAGAGG i panPan2.chr20 C 0 T 69 s gorGor5.CYUI01015848v1 428367 33 - 578057 TCCTGAGAAAGCCTGGAGAACA--GTTTCGAGAGG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12171.000000 s hg38.chr20_KI270870v1_alt 28091 23 + 183433 TCCTGAGAAAGCCTGGAGAACAC s panTro5.chr20 66359887 23 + 66533130 TCCTGAGAAAGCCTGGAGAACAC i panTro5.chr20 T 69 C 0 s panPan2.chr20 62038655 23 + 62195757 ttctgagaaAGACTGGAGAACAC i panPan2.chr20 T 69 C 0 s gorGor5.CYUI01015848v1 428400 23 - 578057 TCCTGAGAAAGCCTGGAGAACAC i gorGor5.CYUI01015848v1 C 0 T 34 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=9035.000000 s hg38.chr20_KI270870v1_alt 28114 35 + 183433 AGTTTTGAGTTTCCTTAGAAAGCCTGGAGAACACA s panTro5.chr20 66359910 35 + 66533130 AGTTTCGAGTTTCCTGAGAAAGTCTGGAGAACACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038678 35 + 62195757 AGTTTCGAGTTTCCTGAGAAAGCCTGGAGAACACA i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e gorGor5.CYUI01015848v1 428423 34 - 578057 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=17868.000000 s hg38.chr20_KI270870v1_alt 28149 33 + 183433 GTTTCGAGAGGTGCTGAGAAAGCCTGGAGAACA s panTro5.chr20 66359945 33 + 66533130 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038713 33 + 62195757 GTTTTGAGAGGTCCTGAGAAAGCCTGGAGAACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428389 33 - 578057 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACA i gorGor5.CYUI01015848v1 T 34 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=600.000000 s hg38.chr20_KI270870v1_alt 28182 2 + 183433 CG s panTro5.chr20 66359978 2 + 66533130 CG i panTro5.chr20 C 0 I 69 s gorGor5.CYUI01015848v1 428422 2 - 578057 CG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62038746 0 + 62195757 C e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=18033.000000 s hg38.chr20_KI270870v1_alt 28184 35 + 183433 GTTTCGAGAGCTCCTGGGAAAGCCTGGAGAACACG s panTro5.chr20 66360049 35 + 66533130 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACA i panTro5.chr20 I 69 C 0 s panPan2.chr20 62038746 35 + 62195757 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACA i panPan2.chr20 C 0 T 35 s gorGor5.CYUI01015848v1 428424 35 - 578057 GTTTCTAGAGGTCCTGAGAAAGCCTGGAGAACACA i gorGor5.CYUI01015848v1 C 0 T 70 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=71349.000000 s hg38.chr20_KI270870v1_alt 28219 140 + 183433 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACGATTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACGGTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACATGGTTTCGAGAGGTCCTGGGAAAGCCTGGAGAACACA s panTro5.chr20 66360084 139 + 66533130 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACGGTTTCGAGAGGTCCTGAGAAAGCCTGG-GAACAGGGTTTTGAGAGGTCCTGAGAAAGGCTGGAGAACACG i panTro5.chr20 C 0 T 243 s panPan2.chr20 62038746 140 + 62195757 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACGGTTTCGAGAGGTCCTGGGAAAGACTGGAGAACACAGTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACA i panPan2.chr20 T 35 C 0 s gorGor5.CYUI01015848v1 428389 140 - 578057 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACGGTTTCTAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGACAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGACAGGTCCTGAGAAAGCCTGGAGAACACA i gorGor5.CYUI01015848v1 T 70 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=5283.000000 s hg38.chr20_KI270870v1_alt 28359 10 + 183433 GTTTCGAGTT s panTro5.chr20 66359980 10 + 66533130 GTTTCAAGTT i panTro5.chr20 T 243 C 0 s panPan2.chr20 62038886 10 + 62195757 GTTTCGAGTT i panPan2.chr20 C 0 T 172 s gorGor5.CYUI01015848v1 428529 10 - 578057 GTTTCGAGTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=3438.000000 s hg38.chr20_KI270870v1_alt 28369 6 + 183433 TCCTGA s panTro5.chr20 66359990 6 + 66533130 TCCTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038724 6 + 62195757 TCCTGA i panPan2.chr20 T 172 C 0 s gorGor5.CYUI01015848v1 428539 6 - 578057 TCCTGA i gorGor5.CYUI01015848v1 C 0 I 69 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=19601.000000 s hg38.chr20_KI270870v1_alt 28375 38 + 183433 GAAAGCCTGGAGAACA--GTTTCGAGAGGTCCTGAGAAAG s panTro5.chr20 66359996 40 + 66533130 GAAAGCCTGGAGAACACGGTTTTGAGAGGTCCTGAGAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038730 38 + 62195757 GAAAGCCTGGAGAACA--GTTTCGAGAGGTCCTGAGAAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428614 40 - 578057 GAAAGCCTGGAGAacacggttttgagaggtcctgagaaag i gorGor5.CYUI01015848v1 I 69 T 265 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=3288.000000 s hg38.chr20_KI270870v1_alt 28413 13 + 183433 CCTGGAGAACACA s panTro5.chr20 66360036 13 + 66533130 GCTGGAGAACACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038768 13 + 62195757 CCTGGAGAACACA i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e gorGor5.CYUI01015848v1 428654 265 - 578057 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=25065.000000 s hg38.chr20_KI270870v1_alt 28426 46 + 183433 GTTTCGAGAGGTCCTGGGAAAGCCTGGAGAACACGGTTTCGAGAGG s panTro5.chr20 66360049 46 + 66533130 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGAGG i panTro5.chr20 C 0 I 208 s panPan2.chr20 62038781 46 + 62195757 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACGGTTTCGAGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428389 46 - 578057 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACGGTTTCTAGAGG i gorGor5.CYUI01015848v1 T 265 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12744.000000 s hg38.chr20_KI270870v1_alt 28472 24 + 183433 TCCTGAGAAAGCCTGGAGAACACA s panTro5.chr20 66360303 24 + 66533130 TCCTGAGAAAGCCTGGAGAACACA i panTro5.chr20 I 208 C 0 s panPan2.chr20 62038827 24 + 62195757 TCCTGGGAAAGACTGGAGAACACA i panPan2.chr20 C 0 I 69 s gorGor5.CYUI01015848v1 428435 24 - 578057 TCCTGAGAAAGCCTGGAGAACACA i gorGor5.CYUI01015848v1 C 0 I 139 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=5283.000000 s hg38.chr20_KI270870v1_alt 28496 10 + 183433 GTTTTGAGTT s panTro5.chr20 66360327 10 + 66533130 GTTTCGAGTT i panTro5.chr20 C 0 T 242 s panPan2.chr20 62038920 10 + 62195757 GTTTCGAGTT i panPan2.chr20 I 69 C 0 s gorGor5.CYUI01015848v1 428598 10 - 578057 GTTTCGAGTT i gorGor5.CYUI01015848v1 I 139 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=16291.000000 s hg38.chr20_KI270870v1_alt 28506 30 + 183433 TCCTGAGAAAGCCTGGAGAACACAGTTTCG s panTro5.chr20 66360095 30 + 66533130 TCCTGAGAAAGCCTGGAGAACACAGTTTCG i panTro5.chr20 T 242 C 0 s panPan2.chr20 62038930 30 + 62195757 TCCTGAGAAAGCCTGGAGAACACAGTTTTG i panPan2.chr20 C 0 I 174 s gorGor5.CYUI01015848v1 428608 30 - 578057 TCCTGAGAAAGCCTGGAGAacacggttttg i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=6396.000000 s hg38.chr20_KI270870v1_alt 28536 16 + 183433 AGAGGTCCTGGGAAAG s panTro5.chr20 66360125 16 + 66533130 AGAGGTCCTGAGAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039134 15 + 62195757 -AGTTTCCTGAGAAAG i panPan2.chr20 I 174 C 0 s gorGor5.CYUI01015848v1 428638 16 - 578057 agaggtcctgagaaag i gorGor5.CYUI01015848v1 C 0 T 69 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=9835.000000 s hg38.chr20_KI270870v1_alt 28552 18 + 183433 CCTGGAGAACACGGTTTC s panTro5.chr20 66360141 18 + 66533130 CCTGGAGAACACGGTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039149 18 + 62195757 CCTGGAGAacacagtttc i panPan2.chr20 C 0 T 207 s gorGor5.CYUI01015848v1 428585 18 - 578057 CCTGGAGAACACAGTTTC i gorGor5.CYUI01015848v1 T 69 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=11982.000000 s hg38.chr20_KI270870v1_alt 28570 30 + 183433 GAGAG-GTCCTGAGAAAGCCTGGAGAACACG s panTro5.chr20 66360159 29 + 66533130 GAGAG-GTCCTGAGAAAGCCTGG-GAACAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038960 30 + 62195757 GAGAG-GTCCTGAGAAAGCCTGGAGAACACA i panPan2.chr20 T 207 T 209 s gorGor5.CYUI01015848v1 428603 29 - 578057 --GAGTTTCCTGAGAAAGCCTGGAGAacacg i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12186.000000 s hg38.chr20_KI270870v1_alt 28600 22 + 183433 GTTTTGAGAGGTCCTGAGAAAG s panTro5.chr20 66360188 22 + 66533130 GTTTTGAGAGGTCCTGAGAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038781 22 + 62195757 GTTTCGAGAGGTCCTGAGAAAG i panPan2.chr20 T 209 C 0 s gorGor5.CYUI01015848v1 428632 22 - 578057 gttttgagaggtcctgagaaag i gorGor5.CYUI01015848v1 C 0 T 173 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=6069.000000 s hg38.chr20_KI270870v1_alt 28622 13 + 183433 CCTGGAGAACATG s panTro5.chr20 66360210 13 + 66533130 GCTGGAGAACACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038803 13 + 62195757 CCTGGAGAACACG i panPan2.chr20 C 0 I 35 s gorGor5.CYUI01015848v1 428481 13 - 578057 CCTGGAGAACACA i gorGor5.CYUI01015848v1 T 173 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=23931.000000 s hg38.chr20_KI270870v1_alt 28635 45 + 183433 GTTTCGAGAGGTTCTGGGAAAGCCTGGAGAACACAGTTTCAAGTT s panTro5.chr20 66360223 45 + 66533130 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGTT i panTro5.chr20 C 0 I 315 s panPan2.chr20 62038851 45 + 62195757 GTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGTT i panPan2.chr20 I 35 C 0 s gorGor5.CYUI01015848v1 428494 45 - 578057 GTTTCGACAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=10914.000000 s hg38.chr20_KI270870v1_alt 28680 19 + 183433 TCCTGAGAAAGCCTGGAGA s panTro5.chr20 66360583 19 + 66533130 TCCTGAGAAAGCCTGGAGA i panTro5.chr20 I 315 C 0 s panPan2.chr20 62038896 19 + 62195757 TCCTGAGAAAGCCTGGAGA i panPan2.chr20 C 0 I 75 s gorGor5.CYUI01015848v1 428539 19 - 578057 TCCTGAGAAAGCCTGGAGA i gorGor5.CYUI01015848v1 C 0 I 2 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=846.000000 s hg38.chr20_KI270870v1_alt 28699 3 + 183433 ACA s panTro5.chr20 66360602 3 + 66533130 ACA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428560 3 - 578057 ACA i gorGor5.CYUI01015848v1 I 2 T 104 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62038915 75 + 62195757 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=3699.000000 s hg38.chr20_KI270870v1_alt 28702 11 + 183433 GTTTCGAGAGG s panTro5.chr20 66360605 10 + 66533130 GTTTCGAG-GG i panTro5.chr20 C 0 T 347 s panPan2.chr20 62038990 11 + 62195757 ATTTCGAGAGG i panPan2.chr20 I 75 C 0 s gorGor5.CYUI01015848v1 428459 11 - 578057 GTTTCGACAGG i gorGor5.CYUI01015848v1 T 104 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=38442.000000 s hg38.chr20_KI270870v1_alt 28713 69 + 183433 TCCTGAGAAAGCCTGGAGAACACAGTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGTT s panTro5.chr20 66360268 69 + 66533130 TCCTGAGAAAGTCTGGAGAACACAGTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGTT i panTro5.chr20 T 347 C 0 s panPan2.chr20 62039001 69 + 62195757 TCCTGAGAAAGCCTGGAGAACACAGTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGTT i panPan2.chr20 C 0 T 140 s gorGor5.CYUI01015848v1 428470 69 - 578057 TCCTGAGAAAGCCTGGAGAACACAGTTTCGACAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12447.000000 s hg38.chr20_KI270870v1_alt 28782 23 + 183433 TCCTGGGAAAGCCTGGAGAACAT s panTro5.chr20 66360337 23 + 66533130 TCCTGAGAAAGCCTGGAGAACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038930 23 + 62195757 TCCTGAGAAAGCCTGGAGAACAC i panPan2.chr20 T 140 C 0 s gorGor5.CYUI01015848v1 428539 23 - 578057 TCCTGAGAAAGCCTGGAGAACAC i gorGor5.CYUI01015848v1 C 0 T 139 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=21651.000000 s hg38.chr20_KI270870v1_alt 28805 47 + 183433 AG-TTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGAGG s panTro5.chr20 66360360 47 + 66533130 AG-TTTGGAGAGGTCCTGAGAAAGCCTCGAGAACACGGTTTCGAGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62038953 48 + 62195757 AGTTTTGGAGAGGTCCTGAGAAAGCCTGGAGAACACAATTTCGAGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428423 47 - 578057 GG-TTTCTAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGACAGG i gorGor5.CYUI01015848v1 T 139 T 35 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=15108.000000 s hg38.chr20_KI270870v1_alt 28852 35 + 183433 TCCTGGGAAAGCCT---GGAGAACACAGTTTCAAGAGG s panTro5.chr20 66360407 38 + 66533130 TCCTGAGAAAGCCTGGAGGAGAACATTTTTTTGAGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039001 35 + 62195757 TCCTGAGAAAGCCT---GGAGAACACAGTTTCGAGAGG i panPan2.chr20 C 0 I 34 s gorGor5.CYUI01015848v1 428435 35 - 578057 TCCTGAGAAAGCCT---GGAGAACACAGTTTCGACAGG i gorGor5.CYUI01015848v1 T 35 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=8668.000000 s hg38.chr20_KI270870v1_alt 28887 31 + 183433 T----------CCTGG-------------------------GAAAGCCTGGAGAACACAGTTTCGA s panTro5.chr20 66360445 66 + 66533130 TGCTGAGGACGCCTGGAGAACATTTTGAGGAGAGGTGAGAAGAAAGCCTGGAGAACACAGTTAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039070 31 + 62195757 ----------TCCTGA-------------------------GAAAGCCTGGAGAACACAGTTTTGA i panPan2.chr20 I 34 C 0 s gorGor5.CYUI01015848v1 428470 31 - 578057 ----------TCCTGA-------------------------GAAAGCCTGGAGAACACAGTTTCGA i gorGor5.CYUI01015848v1 C 0 I 97 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=5861.000000 s hg38.chr20_KI270870v1_alt 28918 27 + 183433 GTTTCCTGAGAAAGCCTGGAGAACATG s panTro5.chr20 66360511 27 + 66533130 GTTTCCTGAAAGAGCCTGGAGAACGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039101 27 + 62195757 GTTTCCTGAGAAAGCCTGGAGAACACA i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e gorGor5.CYUI01015848v1 428501 97 - 578057 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=27541.000000 s hg38.chr20_KI270870v1_alt 28945 56 + 183433 GTTTCGAGTTTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGAGGTCCTGGGAAAG s panTro5.chr20 66360538 56 + 66533130 GTTTTGAGTTCTGAGAAAAAGCCTGGAGAACACGGTTTTGAGAGGTCCTGAGAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039128 56 + 62195757 GTTTTGAGTTTCCTGAGAAAGCCTGGAGAacacagtttcgagaggtcctgggaaag i panPan2.chr20 C 0 T 224 s gorGor5.CYUI01015848v1 428598 56 - 578057 GTTTCGAGTTTCCTGAGAAAGCCTGGAGAacacggttttgagaggtcctgagaaag i gorGor5.CYUI01015848v1 I 97 T 243 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=3480.000000 s hg38.chr20_KI270870v1_alt 29001 18 + 183433 CCTGGAGAACATAGTTTC s panTro5.chr20 66360594 16 + 66533130 CCTGGAGAAC--AGTTTC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428411 18 - 578057 CCTGGAGAACACGGTTTC i gorGor5.CYUI01015848v1 T 243 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62039184 224 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=48372.000000 s hg38.chr20_KI270870v1_alt 29019 95 + 183433 GAGAGGTCCTGGGAAAGCCTGGAGAACACAGTTTCGAGAGGTCCTGGGAAAGCCTGGAGAACACAGTTTCAAGAGGTCCTGGGAAAGCCTGGAGA s panTro5.chr20 66360610 94 + 66533130 GAG-GGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACGGTTTTGAGAGGTCCTGAGAAAGCCTGGAGA i panTro5.chr20 C 0 T 451 s panPan2.chr20 62038960 95 + 62195757 GAGAGGTCCTGAGAAAGCCTGGAGAACACAATTTCGAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGAGAGGTCCTGAGAAAGCCTGGAGA i panPan2.chr20 T 224 C 0 s gorGor5.CYUI01015848v1 428429 95 - 578057 TAGAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGACAGGTCCTGAGAAAGCCTGGAGAACACAGTTTCGACAGGTCCTGAGAAAGCCTGGAGA i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=8514.000000 s hg38.chr20_KI270870v1_alt 29114 15 + 183433 ACACAGTTTCGAGTT s panTro5.chr20 66360253 15 + 66533130 ACACAGTTTCGAGTT i panTro5.chr20 T 451 C 0 s panPan2.chr20 62039055 15 + 62195757 ACACAGTTTCGAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428524 15 - 578057 ACACAGTTTCGAGTT i gorGor5.CYUI01015848v1 C 0 T 69 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=3438.000000 s hg38.chr20_KI270870v1_alt 29129 6 + 183433 TCCTGA s panTro5.chr20 66360268 6 + 66533130 TCCTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039070 6 + 62195757 TCCTGA i panPan2.chr20 C 0 I 68 s gorGor5.CYUI01015848v1 428470 6 - 578057 TCCTGA i gorGor5.CYUI01015848v1 T 69 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=8229.000000 s hg38.chr20_KI270870v1_alt 29135 15 + 183433 GAAAGCCTGGAGAAC s panTro5.chr20 66360274 15 + 66533130 GAAAGTCTGGAGAAC i panTro5.chr20 C 0 I 415 s panPan2.chr20 62039144 15 + 62195757 GAAAGCCTGGAGAac i panPan2.chr20 I 68 C 0 s gorGor5.CYUI01015848v1 428476 15 - 578057 GAAAGCCTGGAGAAC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=10306.000000 s hg38.chr20_KI270870v1_alt 29150 20 + 183433 ACAGTTTCGAGAGGTCCTGG s panTro5.chr20 66360704 20 + 66533130 ACAGTTTCGAGAGGTCCTGA i panTro5.chr20 I 415 C 0 s panPan2.chr20 62039159 20 + 62195757 acagtttcgagaggtcctgg i panPan2.chr20 C 0 T 103 s gorGor5.CYUI01015848v1 428491 20 - 578057 ACAGTTTCGACAGGTCCTGA i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=9768.000000 s hg38.chr20_KI270870v1_alt 29170 17 + 183433 GAAAGCCTGGAGAACAC s panTro5.chr20 66360724 17 + 66533130 GAAAGCCTGGAGAACAC i panTro5.chr20 C 0 T 415 s panPan2.chr20 62039076 17 + 62195757 GAAAGCCTGGAGAACAC i panPan2.chr20 T 103 C 0 s gorGor5.CYUI01015848v1 428511 17 - 578057 GAAAGCCTGGAGAACAC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=5689.000000 s hg38.chr20_KI270870v1_alt 29187 11 + 183433 AGTTTTGAGTT s panTro5.chr20 66360326 11 + 66533130 AGTTTCGAGTT i panTro5.chr20 T 415 C 0 s panPan2.chr20 62039093 11 + 62195757 AGTTTTGAGTT i panPan2.chr20 C 0 T 174 s gorGor5.CYUI01015848v1 428528 11 - 578057 AGTTTCGAGTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12813.000000 s hg38.chr20_KI270870v1_alt 29198 23 + 183433 TCCTGAGAAAGCCTGGAGAACAT s panTro5.chr20 66360337 23 + 66533130 TCCTGAGAAAGCCTGGAGAACAC i panTro5.chr20 C 0 I 381 s panPan2.chr20 62038930 23 + 62195757 TCCTGAGAAAGCCTGGAGAACAC i panPan2.chr20 T 174 C 0 s gorGor5.CYUI01015848v1 428539 23 - 578057 TCCTGAGAAAGCCTGGAGAACAC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=2991.000000 s hg38.chr20_KI270870v1_alt 29221 6 + 183433 AGTTTC s panTro5.chr20 66360741 6 + 66533130 AGTTTC i panTro5.chr20 I 381 C 0 s panPan2.chr20 62038953 6 + 62195757 AGTTTT i panPan2.chr20 C 0 I 145 s gorGor5.CYUI01015848v1 428562 6 - 578057 AGTTTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=1296.000000 s hg38.chr20_KI270870v1_alt 29227 6 + 183433 GAGAGG s panTro5.chr20 66360747 6 + 66533130 GAGAGG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428568 6 - 578057 GACAGG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62038959 145 + 62195757 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=5310.000000 s hg38.chr20_KI270870v1_alt 29233 10 + 183433 TCCTGAGAAA s panTro5.chr20 66360753 10 + 66533130 TCCTGGGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039104 10 + 62195757 TCCTGAGAAA i panPan2.chr20 I 145 C 0 s gorGor5.CYUI01015848v1 428574 10 - 578057 TCCTGAGAAA i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109953306 0 - 110113093 C e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=29638.000000 s hg38.chr20_KI270870v1_alt 29243 33 + 183433 GCCTGGAGAACACAGTTTCGAGTTTCCTGAGAA s panTro5.chr20 66360763 33 + 66533130 GCCTGGAGAACACAGTTTCGAGTTTCCTGAGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039114 33 + 62195757 GCCTGGAGAACACAGTTTTGAGTTTCCTGAGAA i panPan2.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 428584 33 - 578057 GCCTGGAGAACACAGTTTCGAGTTTCCTGAGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109953306 33 - 110113093 gcctggagaacacagtctcgagttgcctgagaa i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=546.000000 s hg38.chr20_KI270870v1_alt 29276 1 + 183433 A s panTro5.chr20 66360796 1 + 66533130 A i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 428617 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109953339 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62039147 1 + 62195757 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=697464.000000 s hg38.chr20_KI270870v1_alt 29277 806 + 183433 GCCTGGAGAacacagttttgagaggtcctgagaaagtgtgcccccagcagtcagattatactttggtttcatagttttcagagaggcaggagttacaggcaaagacagaaatcaatacatagaaggtagacattggtttggccccaaatggcagggtatcttgaagcagggtgtacaggttatatgttgattcagagattctttaatttgcaactggttaaaggtataaagtttaattaaaaaattggagtcagcagaaaggaatgttttgagttaagatataagcttcttaacccataggggtgtgtgacttaactcctgtctggcacagccttaggtcctgtttataatttgatatcttattgtcacaaatagtttgttttgttggtcttatgaaatctattttaacattaatgcctgagatgtatgatgagatgtgtccaacttcccttcccatcatggccagggattcagtttttaaggttttctggggttcccttggccaagagggggtctgttgagttggtgggggccttaggatttcattttttttttttttgaaacagagtctccctctattgcccaggatggagtgcagtggtgctatctcggctcactgcaacctctgtctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggtgtgcaccaccacacccagctaatttttttgtatt-ttcagtagagatgaggtttcactgtgttagccaggatggtctcgatttcctgacctcatgatccacccaccttggcctcccaaagt s panTro5.chr20 66360797 803 + 66533130 GCCTGGAGAacacagtttcgagaggtcctgggaaagtgtgcccccagcagtcagattacactttggtttcatagttttcagagaggcaggagttacaggcaaagacagaaatcaatacatagaaggtagacattggtttggccccaaatggcaggatatcttgaagcagggtgtacaggttatatgttgattcagagattctttaatttgcaactggttaaaggtataaagtttaattaaaaaattggagtcagcagaaaggaatgttttgagttaagatataagcttcttaacccataggggtgtgtgacttaactcctgtctggcacagccttaggtcctgtttataatttgatatcttattgtcacaaagagtttgttttgttggtcttatgaaatctattttaacattaatgcctgagatatatgatgagatatgtccaactccccttcccatcatggccagggattcagtttttaaggttttctggggttcccttggccaagagggggtctgttgagttggtggggggcttaggatttca---ttttttttttggaaacagagtctccctctattgcccaggatggagtgcagtggcgctatctcggctcactgcaacctctgtctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggtgtgcaccaccacacccagctaatttttttgtatt-ttcagtagagacgaggtttcactgtgttagccaggatggtctcgatttcctgacctcgtgatccacccaccttggcctcccaaagt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039148 801 + 62195757 GCCTGGAGAacacagtttcgagaggtcctgggaaagtgtgcccccagcagtcagattacactttggtttcatagttttcagagaggcaggagttacaggcaaagacagaaatcaatacatagaaggtagacattggtttggccccaaatggcaggatatcttgaagcagggtgtacaggttatatgttgattcagagattctttaatttgcaactggttaaaggtataaagtttaattaaaaaattggagtcagcagaaaggaatgttttgagttaagatataagcttcttaacccataggagtgtgtgacttaactcctgtctggcacagccttaggtcctgtttataatttgatatcttattgtcacaaagagtttgttttgttggtcttatgaaatctattttaacattaatgcctgagatatatgatgagatatgtccaactccccttcccatcaaggccagggattcagtttttaaggttttctggggttcccttggccaagagggggtctgttgagttggtggggggcttaggatttca----tttttttttggaaacagagtctccctctattgcccaggatggagtgcagtggcgctatctcggctcactgcaacctctgtctcctgggttcaagcgattctcctgcctcagcctcccaagtagttgggattacaggtgtgcaccaccacacccagctaa-ttttttgtatt-ttcagtagagacgaggtttcactgtgttagccaggatggtctggatttcctgacctcgtgatccacccaccttggcctcccaaagt i panPan2.chr20 I 1 C 0 s gorGor5.CYUI01015848v1 428618 803 - 578057 GCCTGGAGAacacggttttgagaggtcctgagaaagtgtgcccccagcagtcagattacacttcggtttcatagatttcagagaggcaggagttacaggcaaagacagaaatcaatacatagaaggtagacattggtttggccccaaatggcaggatatcttgaagcagggtgtacaggttatatgttgattcagagattctttaatttgcaactggttaaaggtacaaagtttaattaaaaaattggagtcagcagaaaggaatgttttgagttaagatataagcttcttaacccataggggtgtgtgacttaactcctgtctggcacagccttaggtcatgtttataatttgatatcttattgtcacaaagagtttgttttgttggtcttatgaaatctattttaacattaatgcctgaggtgtatgatgagatgtgtccagcttcccttcccatcatggccagggattcagtttttaaggttttctggggttcccttggccaagagggggtctgttgagttggtggggg-cttaggatttca-tttttttttttttgaaacagagtctccctctattgcccaggctggagtgcagtggcgctatctcggctcactgcaacctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggactacaggtgc-ccccaccacgctcggctaa-ttttttgtattctttagtagagacggggtttcaccgtgttagccaggatggtctcgatttcctgacctcatgatccacccaccttggcctcccaaagt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109953340 801 - 110113093 GCCTGGAGAACA--GTTTCGAG-TTtcccgagaaagggtgcccccagcagtcggattacactttgatttcatcgatttcagagaggcaggagttacaggcaaagacagaaatcaatacatagaaggtagacattggtttggcctcaaatgacaggatatcttgaagcagggtgtacaggttatacgtggattcagagattctttaatttgcaactggttaaaggaataaagtttaattaaaaatttagagtcagcagaaaggaacgttttgagttaagatataagcttcttaacccataggggtacgtgacttaactcctgtctggcacggccttaggtcctgtttataatttgatatcttattgtcacaaagagtttgttttgttagtcttatgaaatctgttttaacattaatgcttgaggtgtttgatgagatgtgtccaacttcccttaccatcatgtccagggattcagtttttaaggttttctggggttcctttggccaagagggggtctgttgagttggtggggggcttagaatttca-tttttttttttttgaaacagagtctccctctattgtccaggatggagcgcagtagcaccatctcagctcactgcaccctctgcctcctgggttcaagcgattctcctgcctcagcctcccaagtagctgggattacaggtgtgcatcaccacgcccagctaatttttttgtatt-tttagtagagacggggtttcactgtgttagccaggatggtctcgatttcctgacctcatgat-cacccaccttggcctcccaaagt i nomLeu3.chr13 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=600.000000 s hg38.chr20_KI270870v1_alt 30083 1 + 183433 g s panTro5.chr20 66361600 1 + 66533130 g i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039949 1 + 62195757 g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429421 1 - 578057 g i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e nomLeu3.chr13 109954141 1 - 110113093 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=82964.000000 s hg38.chr20_KI270870v1_alt 30084 115 + 183433 ctgggattacaggtgtgagccactgcgcccggACACACTTTGC-TAGttttttttttttgttttgtttttttAGTAGCagtgctgggattacaggtgtcagccaccatgcctggcT s panTro5.chr20 66361601 115 + 66533130 ctgggattacaggtgtgagccaccgcgcccggACACACTTTGC-TAGtttttttttttttttttgtatttttAGTAGCagtgctgggattacaggtgtcagccaccatgcctggcT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62039950 110 + 62195757 ctgggattacaggtgtgagccaccgcgcccggACACACTTTGCTTAGTTTTTTTTTTTT------TGATTTTAGTAGCagtgctgggattacaggtgtcagccaccatgcctggcT i panPan2.chr20 C 0 M 2145 s gorGor5.CYUI01015848v1 429422 115 - 578057 ctgggattacaggcgtgagccaccgcgcccggACACACTTTGC-TAGTTTTTTTTGTTGTTGTTGTATTTTTAGTAGCAGTTGTGGGATTACAGGTGTCAGCCACCATGCCTGGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954142 103 - 110113093 ctgggattacaggcgtgagccaccgcgcctggccac-----gc--------cttttttttttTTGTATTTTTAGTAGCagtgctgggattacaggcatcagccaccaggcctggcT i nomLeu3.chr13 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=4476.000000 s hg38.chr20_KI270870v1_alt 30199 8 + 183433 CAAATACT s panTro5.chr20 66361716 8 + 66533130 CAAATACT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429537 8 - 578057 CAAATACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954245 8 - 110113093 CAAATACT i nomLeu3.chr13 C 0 I 114 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62040060 2145 + 62195757 M e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=2359.000000 s hg38.chr20_KI270870v1_alt 30207 5 + 183433 ACACT s panTro5.chr20 66361724 5 + 66533130 ACACT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429545 5 - 578057 ACACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954367 5 - 110113093 ACACC i nomLeu3.chr13 I 114 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62040060 2145 + 62195757 M e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=21331.000000 s hg38.chr20_KI270870v1_alt 30212 24 + 183433 GTCTTGATTACTACAGCTTTATAC s panTro5.chr20 66361729 24 + 66533130 GTCTTGATTACTACAGCTTTATAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042208 24 + 62195757 GTCTTGATTACCATAGCTTTATAC i panPan2.chr20 M 2145 C 0 s gorGor5.CYUI01015848v1 429550 24 - 578057 GTCTTGATTACCACAGCTTTATAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954372 24 - 110113093 GTCTTGATTACCACAGCTTTATAC i nomLeu3.chr13 C 0 T 152 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=32202.000000 s hg38.chr20_KI270870v1_alt 30236 37 + 183433 TCAAATACTACACCATCTTGATTACTACAGCTTTATA s panTro5.chr20 66361753 37 + 66533130 TCAAATACTACACTGTCTTGATTACTACAGCTTTATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042232 37 + 62195757 TCAaataccacactgtcttgattactacagctttata i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429574 37 - 578057 TCAaataccacactgtcttgattaccacagctttata i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954244 37 - 110113093 TCAAATACTACACTGTCTTGATTACCACAGCTTTATA i nomLeu3.chr13 T 152 T 38 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12485.000000 s hg38.chr20_KI270870v1_alt 30273 14 + 183433 CTCAAATACCACAC s panTro5.chr20 66361790 14 + 66533130 CTCAAATACCACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042269 14 + 62195757 CTCAAATACTACAC i panPan2.chr20 C 0 T 76 s gorGor5.CYUI01015848v1 429611 14 - 578057 CTCAAATACCACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954243 14 - 110113093 cTCAAATACTACAC i nomLeu3.chr13 T 38 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=10466.000000 s hg38.chr20_KI270870v1_alt 30287 13 + 183433 CGTCTTGATTACC s panTro5.chr20 66361804 13 + 66533130 CGTCTTGATTACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042207 13 + 62195757 CGTCTTGATTACC i panPan2.chr20 T 76 T 13 s gorGor5.CYUI01015848v1 429625 13 - 578057 CATCTTGATTAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954257 13 - 110113093 TGTCTTGATTACC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12396.000000 s hg38.chr20_KI270870v1_alt 30300 25 + 183433 ACAGCTGTATACTCAAATACCACAC s panTro5.chr20 66361817 25 + 66533130 ACAGCTTTATACTCAAATACCACAC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429638 25 - 578057 ACAGCTTTATGCTCAAATACCACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954270 25 - 110113093 ACAGCTTTATACTCAAATGCTACAC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042220 13 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=20702.000000 s hg38.chr20_KI270870v1_alt 30325 24 + 183433 CGTCTTGATTACCACAGCTTTATA s panTro5.chr20 66361842 24 + 66533130 CGTCTTGATTACCACAGCTTTATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042207 24 + 62195757 CGTCTTGATTACCATAGCTTTATA i panPan2.chr20 T 13 C 0 s gorGor5.CYUI01015848v1 429663 24 - 578057 CGTCTTGATTACCACAGCTTTATA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954295 24 - 110113093 TGTCTTGATTACGACAGCTTTATA i nomLeu3.chr13 C 0 T 76 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=8647.000000 s hg38.chr20_KI270870v1_alt 30349 10 + 183433 CTCAAATACC s panTro5.chr20 66361866 10 + 66533130 CTCAAATACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042231 10 + 62195757 CTCAaatacc i panPan2.chr20 C 0 I 113 s gorGor5.CYUI01015848v1 429687 10 - 578057 CTCAAATACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954243 10 - 110113093 cTCAAATACT i nomLeu3.chr13 T 76 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=14015.000000 s hg38.chr20_KI270870v1_alt 30359 17 + 183433 ACACCGTCTTGATTACC s panTro5.chr20 66361876 17 + 66533130 ACACCGTCTTGATTACC i panTro5.chr20 C 0 I 113 s panPan2.chr20 62042354 17 + 62195757 ACACTGTCTTGATTAAC i panPan2.chr20 I 113 C 0 s gorGor5.CYUI01015848v1 429697 17 - 578057 ACACCATCTTGATTACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954253 17 - 110113093 ACACTGTCTTGATTACC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=24972.000000 s hg38.chr20_KI270870v1_alt 30376 30 + 183433 AAAGCTTTATACTCAaataccacactgtct s panTro5.chr20 66362006 30 + 66533130 ACAGCTTTATACTCAAATGCCACACTGTCT i panTro5.chr20 I 113 T 76 s panPan2.chr20 62042371 30 + 62195757 ACAGCTTTATACTCAAATACTACACTGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429714 30 - 578057 ATAGCTTTATACTCAAATACTACACTGTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954270 30 - 110113093 ACAGCTTTATACTCAAATGCTACACTGTCT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=47258.000000 s hg38.chr20_KI270870v1_alt 30406 60 + 183433 tgattaccacagctttataCTCAAATAACACACCGTCTTGATTACCACAGCTTTATACTC s panTro5.chr20 66361960 60 + 66533130 TGATTACTACAGCTTTATACTCAAATGCCACACTGTCTTGATTACCACAGCTTTATACTC i panTro5.chr20 T 76 C 0 s panPan2.chr20 62042401 60 + 62195757 TGATTACCACAGCTTTATACTCAaatactacactgtcttgattactatagctttatactc i panPan2.chr20 C 0 T 76 s gorGor5.CYUI01015848v1 429744 60 - 578057 TGATTACCACAGCTTTATACTCAAATACCACACCATCTTGATTAACACAGCTTTATACTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954300 60 - 110113093 TGATTACGACAGCTTTATACTCAAATGCTACACTGTTTTGATTACTACAGGTTTATACGC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12859.000000 s hg38.chr20_KI270870v1_alt 30466 16 + 183433 AAATACTACACCGTCT s panTro5.chr20 66362020 16 + 66533130 AAATGCCACACTGTCT i panTro5.chr20 C 0 T 76 s panPan2.chr20 62042385 16 + 62195757 AAATACTACACTGTCT i panPan2.chr20 T 76 C 0 s gorGor5.CYUI01015848v1 429804 16 - 578057 AAATACCACACCGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954360 16 - 110113093 AAATGCTACACCGTCT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=52190.000000 s hg38.chr20_KI270870v1_alt 30482 60 + 183433 TGATTACCACAGCTTTATACTCAaataccacactgtcttgattaccacagctttataCTC s panTro5.chr20 66361960 60 + 66533130 TGATTACTACAGCTTTATACTCAAATGCCACACTGTCTTGATTACCACAGCTTTATACTC i panTro5.chr20 T 76 C 0 s panPan2.chr20 62042401 60 + 62195757 TGATTACCACAGCTTTATACTCAaatactacactgtcttgattactatagctttatactc i panPan2.chr20 C 0 T 38 s gorGor5.CYUI01015848v1 429820 60 - 578057 TGATTACCACAGCTTTATACTCAAATACTACACTGTTTTGATTACCACAGCTTTATACTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954376 60 - 110113093 TGATTACCACAGCTTTATACTCAAATGCTACACTGTCTTGATTACGACAGCTTTATACTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12562.000000 s hg38.chr20_KI270870v1_alt 30542 17 + 183433 Aaataccacactgtctt s panTro5.chr20 66362020 17 + 66533130 AAATGCCACACTGTCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042423 17 + 62195757 Aaatactacactgtctt i panPan2.chr20 T 38 C 0 s gorGor5.CYUI01015848v1 429880 17 - 578057 AAATAGTACACTGTTTT i gorGor5.CYUI01015848v1 C 0 I 732 s nomLeu3.chr13 109954436 17 - 110113093 AAATGCTACACCGTCTT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=14492.000000 s hg38.chr20_KI270870v1_alt 30559 18 + 183433 gattcctatagctttata s panTro5.chr20 66362037 18 + 66533130 GATTACCACAGCTTTATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042440 18 + 62195757 gattactatagctttata i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430629 18 - 578057 gattactacagctttata i gorGor5.CYUI01015848v1 I 732 C 0 s nomLeu3.chr13 109954453 18 - 110113093 GATTACCACAGCTTTATA i nomLeu3.chr13 C 0 T 228 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=2910.000000 s hg38.chr20_KI270870v1_alt 30577 3 + 183433 CTC s panTro5.chr20 66362055 3 + 66533130 CTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042458 3 + 62195757 ctc i panPan2.chr20 C 0 T 253 s gorGor5.CYUI01015848v1 430647 3 - 578057 CTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954243 3 - 110113093 cTC i nomLeu3.chr13 T 228 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=6235.000000 s hg38.chr20_KI270870v1_alt 30580 12 + 183433 Aaataccacact s panTro5.chr20 66362058 12 + 66533130 Aaataccacact i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430650 12 - 578057 AAATACTACACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954246 12 - 110113093 AAATACTACACT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042461 253 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=42797.000000 s hg38.chr20_KI270870v1_alt 30592 50 + 183433 gtcttgattaccacagctttataCTCAaatactacactgtcttgattact s panTro5.chr20 66362070 50 + 66533130 gtcttgattactacagctttataCTCAaatactacactgtcttgattact i panTro5.chr20 C 0 T 227 s panPan2.chr20 62042208 50 + 62195757 GTCTTGATTACCATAGCTTTATACTCAaataccacactgtcttgattact i panPan2.chr20 T 253 C 0 s gorGor5.CYUI01015848v1 430662 50 - 578057 GTTTTGATTACCACAGCTTTATACTCAAATACTACACCGTCTTGATTACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954258 50 - 110113093 GTCTTGATTACCACAGCTTTATACTCAAATGCTACACTGTCTTGATTACG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=25905.000000 s hg38.chr20_KI270870v1_alt 30642 30 + 183433 atagctttataCTCAaatactacactgtct s panTro5.chr20 66361893 30 + 66533130 ATAGCTTTATACTCAaataccacactgtct i panTro5.chr20 T 227 C 0 s panPan2.chr20 62042258 30 + 62195757 acagctttataCTCAAATACTACACTGTCT i panPan2.chr20 C 0 T 38 s gorGor5.CYUI01015848v1 430712 30 - 578057 ACAGCTTTATACTCAaatactacactgtct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954308 30 - 110113093 ACAGCTTTATACTCAAATGCTACACTGTTT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=16045.000000 s hg38.chr20_KI270870v1_alt 30672 19 + 183433 tgattactatagctttata s panTro5.chr20 66361923 19 + 66533130 tgattactacagctttata i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042250 19 + 62195757 tgattactacagctttata i panPan2.chr20 T 38 C 0 s gorGor5.CYUI01015848v1 430742 19 - 578057 tgattactatagctttata i gorGor5.CYUI01015848v1 C 0 T 978 s nomLeu3.chr13 109954338 19 - 110113093 TGATTACTACAGGTTTATA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=6333.000000 s hg38.chr20_KI270870v1_alt 30691 13 + 183433 CTCAAATACTACA s panTro5.chr20 66361942 13 + 66533130 CTCAAATACTACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042269 13 + 62195757 CTCAAATACTACA i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109954357 13 - 110113093 CGCAAATGCTACA i nomLeu3.chr13 C 0 I 228 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e gorGor5.CYUI01015848v1 430761 978 - 578057 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=1755.000000 s hg38.chr20_KI270870v1_alt 30704 6 + 183433 CTGTCT- s panTro5.chr20 66361955 6 + 66533130 CTGTCT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042282 6 + 62195757 CTGTCT- i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109954598 7 - 110113093 CTGTTTT i nomLeu3.chr13 I 228 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e gorGor5.CYUI01015848v1 430761 978 - 578057 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=23997.000000 s hg38.chr20_KI270870v1_alt 30710 31 + 183433 GATTACTACAGCTTTATACTCAAATACCACC s panTro5.chr20 66361961 31 + 66533130 GATTACTACAGCTTTATACTCAAATGCCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042288 31 + 62195757 GATTACTACAGCTTTATACTCAAATGCCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429783 31 - 578057 GATTAACACAGCTTTATACTCAAATACCACA i gorGor5.CYUI01015848v1 T 978 C 0 s nomLeu3.chr13 109954605 31 - 110113093 GATTACTACAGGTTTATACGCAAATGCTACA i nomLeu3.chr13 C 0 T 266 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=30797.000000 s hg38.chr20_KI270870v1_alt 30741 35 + 183433 CTGTCTTGATTACCACAGCTTTATACTCAAATACC s panTro5.chr20 66361992 35 + 66533130 CTGTCTTGATTACCACAGCTTTATACTCAAATGCC i panTro5.chr20 C 0 I 302 s panPan2.chr20 62042319 35 + 62195757 CTGTCTTGATTACCACAGCTTTATACTCAAATGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429814 35 - 578057 CCGTCTTGATTACCACAGCTTTATACTCAAATACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954370 35 - 110113093 CCGTCTTGATTACCACAGCTTTATACTCAAATGCT i nomLeu3.chr13 T 266 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=61902.000000 s hg38.chr20_KI270870v1_alt 30776 76 + 183433 ACACCGTCTTGATTACCACAGCTGTATACTCAAATACTACACCGTCTTGATTACCACAGCTGTATACTCAAATACT s panTro5.chr20 66362329 76 + 66533130 ACACTGTCTTGATTACCACAGCTTTATACTCAAATGCCACACTGTCTTGATTAACACAGCTTTATACTCAAATACT i panTro5.chr20 I 302 T 378 s panPan2.chr20 62042354 76 + 62195757 ACACTGTCTTGATTAACACAGCTTTATACTCAAATACTACACTGTCTTGATTACCACAGCTTTATACTCAaatact i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429849 76 - 578057 ACACTGTTTTGATTACCACAGCTTTATACTCAAATAGTACACTGTTTTGATTACCACAGCTTTATACTCAAATACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954405 76 - 110113093 ACACTGTCTTGATTACGACAGCTTTATACTCAAATGCTACACCGTCTTGATTACCACAGCTTTATACTCAAATGCT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=27754.000000 s hg38.chr20_KI270870v1_alt 30852 31 + 183433 ACACTGTCTTGATTACCACAGCTTTATACTC s panTro5.chr20 66362027 31 + 66533130 ACACTGTCTTGATTACCACAGCTTTATACTC i panTro5.chr20 T 378 C 0 s panPan2.chr20 62042430 31 + 62195757 acactgtcttgattactatagctttatactc i panPan2.chr20 C 0 T 76 s gorGor5.CYUI01015848v1 429925 31 - 578057 ACACCGTCTTGATTACCACAGCTTTATACTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954481 31 - 110113093 ACACTGTCTTGATTACCACAGCTTTATACTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=64622.000000 s hg38.chr20_KI270870v1_alt 30883 76 + 183433 AAATACCACACTGTCTTGATTACCACCGCTTTATACTCAaataccacactgtcttgattactatagctttataCTC s panTro5.chr20 66362058 76 + 66533130 AaataccacactgtcttgattactacagctttataCTCAaatactacactgtcttgattactatagctttataCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042385 76 + 62195757 AAATACTACACTGTCTTGATTACCACAGCTTTATACTCAaatactacactgtcttgattactatagctttatactc i panPan2.chr20 T 76 T 38 s gorGor5.CYUI01015848v1 429956 76 - 578057 AAATACTGCACCGTCTTGATTACCATAGCTTTATACTCAaataccacactgtcttgattaccacagctttataCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954512 76 - 110113093 AAATACTACACTGTCTTGATTACCACAGCTTTATACTCAAATGCTACACTGTCTTGATTACGACAGCTTTATACTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=26859.000000 s hg38.chr20_KI270870v1_alt 30959 37 + 183433 AAATACT--ACACTGTC-TGATTACTACAGCTTTATACTC s panTro5.chr20 66362134 37 + 66533130 AAATACT--ACACTGTC-TGATTACTACAGCTTTATACTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042423 38 + 62195757 Aaatact--acactgtcttgattactatagctttatactc i panPan2.chr20 T 38 T 220 s gorGor5.CYUI01015848v1 430032 40 - 578057 AAATACTACACACTGTCTTGATTACCACAGCTTTATACTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954588 38 - 110113093 AAATGCT--ACACTGTTTTGATTACTACAGGTTTATACGC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=21384.000000 s hg38.chr20_KI270870v1_alt 30996 45 + 183433 Aaatac--cacactgtcttgattaccacagctttataCTCAaatact s panTro5.chr20 66362171 45 + 66533130 Aaatac--cacactgtcttgattactacagctttataCTCAaatact i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430072 47 - 578057 GAATACTACACACTGTCTTGATTACCACAGCTTTATACTCGAATACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954626 45 - 110113093 AAATGC--TACACCGTCTTGATTACCACAGctttatactcaaatgct i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042461 220 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=1910.000000 s hg38.chr20_KI270870v1_alt 31041 2 + 183433 ac s panTro5.chr20 66362216 2 + 66533130 ac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042241 2 + 62195757 ac i panPan2.chr20 T 220 C 0 s gorGor5.CYUI01015848v1 430119 2 - 578057 AC i gorGor5.CYUI01015848v1 C 0 I 318 s nomLeu3.chr13 109954671 2 - 110113093 ac i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=4164.000000 s hg38.chr20_KI270870v1_alt 31043 8 + 183433 actgtctt s panTro5.chr20 66362218 8 + 66533130 actgtctt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042243 8 + 62195757 actgtctt i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109954673 8 - 110113093 accgtctt i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e gorGor5.CYUI01015848v1 430121 318 - 578057 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=17748.000000 s hg38.chr20_KI270870v1_alt 31051 21 + 183433 gattactatagctttataCTC s panTro5.chr20 66362226 21 + 66533130 gattactatagctttataCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042251 21 + 62195757 gattactacagctttataCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430439 21 - 578057 GATTACCACAGCTTTATACTC i gorGor5.CYUI01015848v1 I 318 C 0 s nomLeu3.chr13 109954681 21 - 110113093 gattacgacagctttatactc i nomLeu3.chr13 C 0 T 380 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12112.000000 s hg38.chr20_KI270870v1_alt 31072 15 + 183433 AAATACTACACTGTC s panTro5.chr20 66362247 15 + 66533130 AAATACTACACTGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042272 15 + 62195757 AAATACTACACTGTC i panPan2.chr20 C 0 T 75 s gorGor5.CYUI01015848v1 430460 15 - 578057 AAATACCACACCGTC i gorGor5.CYUI01015848v1 C 0 I 1 s nomLeu3.chr13 109954322 15 - 110113093 AAATGCTACACTGTT i nomLeu3.chr13 T 380 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=56303.000000 s hg38.chr20_KI270870v1_alt 31087 67 + 183433 -TGATTACTACAGCTTTATACTCAAATACCACACTATCTTGATTACTACAGCTTTATACTCAAATACT s panTro5.chr20 66362262 67 + 66533130 -TGATTACTACAGCTTTATACTCAaataccacactgtcttgattactacagctttataCTCAAATACT i panTro5.chr20 C 0 I 76 s panPan2.chr20 62042212 67 + 62195757 -TGATTACCATAGCTTTATACTCAaataccacactgtcttgattactacagctttataCTCAAATACT i panPan2.chr20 T 75 C 0 s gorGor5.CYUI01015848v1 430476 67 - 578057 -TGATTACCACAGCTTTATACTCAAATACCACACCGTCTTGATTACCACAGCTTTATACTCAAATACT i gorGor5.CYUI01015848v1 I 1 C 0 s nomLeu3.chr13 109954337 68 - 110113093 TTGATTACTACAGGTTTATACGCAAATGCTACACCGTCTTGATTACCACAGCTTTATACTCAAATGCT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=6342.000000 s hg38.chr20_KI270870v1_alt 31154 9 + 183433 ACACTGTC-T s panTro5.chr20 66362405 10 + 66533130 ACACTGTCTT i panTro5.chr20 I 76 C 0 s panPan2.chr20 62042279 9 + 62195757 ACACTGTC-T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430543 9 - 578057 ACACCGTC-T i gorGor5.CYUI01015848v1 C 0 T 655 s nomLeu3.chr13 109954405 9 - 110113093 ACACTGTC-T i nomLeu3.chr13 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=15633.000000 s hg38.chr20_KI270870v1_alt 31163 18 + 183433 GATTACTACAGCTTTATA s panTro5.chr20 66362415 18 + 66533130 GATTACTACAGCTTTATA i panTro5.chr20 C 0 T 719 s panPan2.chr20 62042288 18 + 62195757 GATTACTACAGCTTTATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 429897 18 - 578057 GATTACCACAGCTTTATA i gorGor5.CYUI01015848v1 T 655 C 0 s nomLeu3.chr13 109954415 18 - 110113093 GATTACGACAGCTTTATA i nomLeu3.chr13 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=131298.000000 s hg38.chr20_KI270870v1_alt 31181 155 + 183433 CTCAAATACCACACCGTCTTGATTACCACAGCTTTATACTCAAATACTACACTGTCTTGATTACTACAGCTTTATACTCAAATACCACACCGTCTTGATTACCACAGCTGTATACTCAAATACT--ACACCGTCTTGATTACCACAGCTTTATACTC s panTro5.chr20 66361714 155 + 66533130 cTCAAATACTACACTGTCTTGATTACTACAGCTTTATACTCAAATACTACACTGTCTTGATTACTACAGCTTTATACTCAAATACCACACCGTCTTGATTACCACAGCTTTATACTCAAATACC--ACACCGTCTTGATTACCACAGCTTTATACTC i panTro5.chr20 T 719 C 0 s panPan2.chr20 62042306 155 + 62195757 CTCAAATGCCACACTGTCTTGATTACCACAGCTTTATACTCAAATGCCACACTGTCTTGATTAACACAGCTTTATACTCAAATACTACACTGTCTTGATTACCACAGCTTTATACTCAaatact--acactgtcttgattactatagctttatactc i panPan2.chr20 C 0 T 76 s gorGor5.CYUI01015848v1 429915 157 - 578057 CTCAAATACCACACCGTCTTGATTACCACAGCTTTATACTCAAATACTGCACCGTCTTGATTACCATAGCTTTATACTCAaataccacactgtcttgattaccacagctttataCTCAAATACTACACACTGTCTTGATTACCACAGCTTTATACTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954433 155 - 110113093 CTCAAATGCTACACCGTCTTGATTACCACAGCTTTATACTCAAATGCTACACTGTCTTGATTACCACAGCTTTATACTCAAATACTACACTGTCTTGATTACCACAGCTTTATACTCAAATGCT--ACACTGTCTTGATTACGACAGCTTTATACTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=6394.000000 s hg38.chr20_KI270870v1_alt 31336 8 + 183433 AAATACTA s panTro5.chr20 66361869 8 + 66533130 AAATACTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042385 8 + 62195757 AAATACTA i panPan2.chr20 T 76 C 0 s gorGor5.CYUI01015848v1 430072 8 - 578057 GAATACTA i gorGor5.CYUI01015848v1 C 0 I 80 s nomLeu3.chr13 109954588 8 - 110113093 AAATGCTA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=56844.000000 s hg38.chr20_KI270870v1_alt 31344 68 + 183433 CACCGTCTTGATTACCACAGCTTTATACTCAaataccacactgtcttgattactatagctttataCTC s panTro5.chr20 66361877 68 + 66533130 CACCGTCTTGATTACCATAGCTTTATACTCAaataccacactgtcttgattactacagctttataCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042393 68 + 62195757 CACTGTCTTGATTACCACAGCTTTATACTCAaatactacactgtcttgattactatagctttatactc i panPan2.chr20 C 0 T 241 s gorGor5.CYUI01015848v1 430160 68 - 578057 CACCGTCTTGATTACCACAGCTTTATACTCAaataccacactgtcttgattaccacagctttataCTC i gorGor5.CYUI01015848v1 I 80 C 0 s nomLeu3.chr13 109954596 68 - 110113093 CACTGTTTTGATTACTACAGGTTTATACGCAAATGCTACACCGTCTTGATTACCACAGctttatactc i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=4056.000000 s hg38.chr20_KI270870v1_alt 31412 8 + 183433 AAATACTA s panTro5.chr20 66361945 8 + 66533130 AAATACTA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430228 8 - 578057 AAATACTA i gorGor5.CYUI01015848v1 C 0 T 60 s nomLeu3.chr13 109954664 8 - 110113093 aaatgcta i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042461 241 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=2743.000000 s hg38.chr20_KI270870v1_alt 31420 15 + 183433 CACTGTC-TGATTACT s panTro5.chr20 66361953 15 + 66533130 CACTGTC-TGATTACT i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109954672 16 - 110113093 caccgtcttgattacg i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042461 241 + 62195757 T e gorGor5.CYUI01015848v1 430236 60 - 578057 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=12666.000000 s hg38.chr20_KI270870v1_alt 31435 14 + 183433 ACAGCTTTATACTC s panTro5.chr20 66361968 14 + 66533130 ACAGCTTTATACTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042220 14 + 62195757 ATAGCTTTATACTC i panPan2.chr20 T 241 C 0 s gorGor5.CYUI01015848v1 430176 14 - 578057 ACAGCTTTATACTC i gorGor5.CYUI01015848v1 T 60 C 0 s nomLeu3.chr13 109954688 14 - 110113093 acagctttatactc i nomLeu3.chr13 C 0 T 152 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=32311.000000 s hg38.chr20_KI270870v1_alt 31449 37 + 183433 AaataccacactgtcttgattaccacagctttataCT s panTro5.chr20 66361982 37 + 66533130 AAATGCCACACTGTCTTGATTACCACAGCTTTATACT i panTro5.chr20 C 0 I 189 s panPan2.chr20 62042234 37 + 62195757 AaataccacactgtcttgattactacagctttataCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430190 37 - 578057 AaataccacactgtcttgattaccacagctttataCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954550 37 - 110113093 AAATGCTACACTGTCTTGATTACGACAGCTTTATACT i nomLeu3.chr13 T 152 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=7882.000000 s hg38.chr20_KI270870v1_alt 31486 9 + 183433 CAAATACTA s panTro5.chr20 66362208 9 + 66533130 CAaatacta i panTro5.chr20 I 189 C 0 s panPan2.chr20 62042271 9 + 62195757 CAAATACTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430227 9 - 578057 CAAATACTA i gorGor5.CYUI01015848v1 C 0 I 42 s nomLeu3.chr13 109954587 9 - 110113093 CAAATGCTA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=19727.000000 s hg38.chr20_KI270870v1_alt 31495 26 + 183433 CACTGTC-TGATTACTACAGCTTTATA s panTro5.chr20 66362217 27 + 66533130 cactgtcttgattactatagctttata i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042280 26 + 62195757 CACTGTC-TGATTACTACAGCTTTATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430278 27 - 578057 CACTGTCTTGATTACCACAGCTTTATA i gorGor5.CYUI01015848v1 I 42 C 0 s nomLeu3.chr13 109954596 27 - 110113093 CACTGTTTTGATTACTACAGGTTTATA i nomLeu3.chr13 C 0 T 380 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=7737.000000 s hg38.chr20_KI270870v1_alt 31521 9 + 183433 CTCAaatac s panTro5.chr20 66362244 9 + 66533130 CTCAAATAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042306 9 + 62195757 CTCAAATGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430305 9 - 578057 CTCAAATGC i gorGor5.CYUI01015848v1 C 0 T 234 s nomLeu3.chr13 109954243 9 - 110113093 cTCAAATAC i nomLeu3.chr13 T 380 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=7845.000000 s hg38.chr20_KI270870v1_alt 31530 9 + 183433 cacactgtc s panTro5.chr20 66362253 9 + 66533130 TACACTGTC i panTro5.chr20 C 0 I 37 s panPan2.chr20 62042315 9 + 62195757 CACACTGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430080 9 - 578057 CACACTGTC i gorGor5.CYUI01015848v1 T 234 C 0 s nomLeu3.chr13 109954252 9 - 110113093 TACACTGTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=71996.000000 s hg38.chr20_KI270870v1_alt 31539 87 + 183433 ttgattaccacagctttataCTCAAATACT--ACACTGTCTTGATTACCACAGCTTTATACTCAAATACCACACCGTCTTGATTACCAC s panTro5.chr20 66362299 87 + 66533130 ttgattactacagctttataCTCAAATACT--ACACTGTCTTGATTACCACAGCTTTATACTCAAATGCCACACTGTCTTGATTAACAC i panTro5.chr20 I 37 C 0 s panPan2.chr20 62042324 87 + 62195757 TTGATTACCACAGCTTTATACTCAAATGCC--ACACTGTCTTGATTAACACAGCTTTATACTCAAATACTACACTGTCTTGATTACCAC i panPan2.chr20 C 0 T 76 s gorGor5.CYUI01015848v1 430089 89 - 578057 TTGATTACCACAGCTTTATACTCGAATACTACACACTGTCTTGATTACCACAGCTTTATACTCAAATACCACACCGTCTTGATTACCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954261 87 - 110113093 TTGATTACCACAGCTTTATACTCAAATGCT--ACACTGTCTTGATTACGACAGCTTTATACTCAAATGCTACACTGTTTTGATTACTAC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=6650.000000 s hg38.chr20_KI270870v1_alt 31626 9 + 183433 AGCTGTATA s panTro5.chr20 66362386 9 + 66533130 AGCTTTATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042335 9 + 62195757 AGCTTTATA i panPan2.chr20 T 76 C 0 s gorGor5.CYUI01015848v1 430178 9 - 578057 AGCTTTATA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954348 9 - 110113093 AGGTTTATA i nomLeu3.chr13 C 0 T 114 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=71658.000000 s hg38.chr20_KI270870v1_alt 31635 85 + 183433 CTCAAATACCACACTGTCTTGATTACCACAGCTGTATACTCAaatac--cacactgtcttgattaccacagctttataCTCAaatac s panTro5.chr20 66362395 85 + 66533130 CTCAAATACTACACTGTCTTGATTACTACAGCTTTATACTCAaatac--cacactgtcttgattaccacagctttataCTCAaatac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042344 85 + 62195757 CTCAAATGCCACACTGTCTTGATTAACACAGCTTTATACTCAAATAC--TACACTGTCTTGATTACCACAGCTTTATACTCAaatac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430187 87 - 578057 CTCAaataccacactgtcttgattaccacagctttataCTCAAATACTACACACTGTCTTGATTACCACAGCTTTATACTCGAATAC i gorGor5.CYUI01015848v1 C 0 I 154 s nomLeu3.chr13 109954243 85 - 110113093 cTCAAATACTACACTGTCTTGATTACCACAGCTTTATACTCAAATGC--TACACTGTCTTGATTACGACAGCTTTATACTCAAATGC i nomLeu3.chr13 T 114 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=24047.000000 s hg38.chr20_KI270870v1_alt 31720 30 + 183433 cacactgtcttgattaccacagctttatac s panTro5.chr20 66362480 30 + 66533130 tacactgtcttgattactatagctttatac i panTro5.chr20 C 0 T 491 s panPan2.chr20 62042429 30 + 62195757 tacactgtcttgattactatagctttatac i panPan2.chr20 C 0 T 171 s gorGor5.CYUI01015848v1 430428 30 - 578057 CACACCGTCTTGATTACCACAGCTTTATAC i gorGor5.CYUI01015848v1 I 154 C 0 s nomLeu3.chr13 109954328 30 - 110113093 TACACTGTTTTGATTACTACAGGTTTATAC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=-128.000000 s hg38.chr20_KI270870v1_alt 31750 1 + 183433 g s gorGor5.CYUI01015848v1 430458 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954358 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042459 171 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e panTro5.chr20 66362510 491 + 66533130 T e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=22931.000000 s hg38.chr20_KI270870v1_alt 31751 45 + 183433 caaataccacactgtcttgattactatagctttataCTCAaatac s panTro5.chr20 66362019 45 + 66533130 CAAATGCCACACTGTCTTGATTACCACAGCTTTATACTCAaatac i panTro5.chr20 T 491 C 0 s gorGor5.CYUI01015848v1 430459 45 - 578057 CAAATACCACACCGTCTTGATTACCACAGCTTTATACTCAAATAC i gorGor5.CYUI01015848v1 C 0 T 228 s nomLeu3.chr13 109954359 45 - 110113093 CAAATGCTACACCGTCTTGATTACCACAGCTTTATACTCAAATGC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042459 171 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=5883.000000 s hg38.chr20_KI270870v1_alt 31796 11 + 183433 cacactgtctt s panTro5.chr20 66362064 11 + 66533130 cacactgtctt i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430276 11 - 578057 CACACTGTCTT i gorGor5.CYUI01015848v1 T 228 C 0 s nomLeu3.chr13 109954404 11 - 110113093 TACACTGTCTT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042459 171 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=23593.000000 s hg38.chr20_KI270870v1_alt 31807 28 + 183433 gattactacagctttataCTCAaatacc s panTro5.chr20 66362075 28 + 66533130 gattactacagctttataCTCAaatact i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042288 28 + 62195757 GATTACTACAGCTTTATACTCAAATGCC i panPan2.chr20 T 171 C 0 s gorGor5.CYUI01015848v1 430287 28 - 578057 GATTACCACAGCTTTATACTCAAATGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954415 28 - 110113093 GATTACGACAGCTTTATACTCAAATGCT i nomLeu3.chr13 C 0 T 190 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=39649.000000 s hg38.chr20_KI270870v1_alt 31835 46 + 183433 acactgtcttgattactacagctttataCTCAAATACTACACTGTC s panTro5.chr20 66362103 46 + 66533130 acactgtcttgattactatagctttataCTCAAATACTACACTGTC i panTro5.chr20 C 0 I 188 s panPan2.chr20 62042316 46 + 62195757 ACACTGTCTTGATTACCACAGCTTTATACTCAAATGCCACACTGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430315 46 - 578057 ACACCGTCTTGATTACCACAGCTTTATACTCAAATACCACACCGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954253 46 - 110113093 ACACTGTCTTGATTACCACAGCTTTATACTCAAATGCTACACTGTC i nomLeu3.chr13 T 190 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=62486.000000 s hg38.chr20_KI270870v1_alt 31881 77 + 183433 TTGATTAACACAGCTTTATACTCAAATACTACACTGTCTTGATTACCACAGCTTTATACTCAaatactacactgtct s panTro5.chr20 66362337 77 + 66533130 TTGATTACCACAGCTTTATACTCAAATGCCACACTGTCTTGATTAACACAGCTTTATACTCAAATACTACACTGTCT i panTro5.chr20 I 188 T 265 s panPan2.chr20 62042362 77 + 62195757 TTGATTAACACAGCTTTATACTCAAATACTACACTGTCTTGATTACCACAGCTTTATACTCAaatactacactgtct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 430361 77 - 578057 TTGATTACCACAGCTTTATACTCAAATACGACACCGTCTTGATTACCACAGCTTTATACTCAAATACCACACCGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954299 77 - 110113093 TTGATTACGACAGCTTTATACTCAAATGCTACACTGTTTTGATTACTACAGGTTTATACGCAAATGCTACACCGTCT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=19132.000000 s hg38.chr20_KI270870v1_alt 31958 22 + 183433 tgattactatagctttataCTC s panTro5.chr20 66362149 22 + 66533130 TGATTACTACAGCTTTATACTC i panTro5.chr20 T 265 C 0 s panPan2.chr20 62042439 22 + 62195757 tgattactatagctttatactc i panPan2.chr20 C 0 T 38 s gorGor5.CYUI01015848v1 430438 22 - 578057 TGATTACCACAGCTTTATACTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954376 22 - 110113093 TGATTACCACAGCTTTATACTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=31987.000000 s hg38.chr20_KI270870v1_alt 31980 38 + 183433 AaataccacactgtcttgattactatagctttataCTC s panTro5.chr20 66362171 38 + 66533130 AaataccacactgtcttgattactacagctttataCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042423 38 + 62195757 Aaatactacactgtcttgattactatagctttatactc i panPan2.chr20 T 38 T 50 s gorGor5.CYUI01015848v1 430460 38 - 578057 AAATACCACACCGTCTTGATTACCACAGCTTTATACTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954398 38 - 110113093 AAATGCTACACTGTCTTGATTACGACAGCTTTATACTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=27181.000000 s hg38.chr20_KI270870v1_alt 32018 53 + 183433 AAATACTACACTGTCTTGATTACCACAGCTTTATACTCAaatactacactgtc s panTro5.chr20 66362209 53 + 66533130 AaatactacactgtcttgattactatagctttataCTCAAATACTACACTGTC i panTro5.chr20 C 0 I 67 s gorGor5.CYUI01015848v1 430498 53 - 578057 AAATACCACACCGTCTTGATTACCACAGCTTTATACTCAAATACTACACCGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954436 53 - 110113093 AAATGCTACACCGTCTTGATTACCACAGCTTTATACTCAAATGCTACACTGTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042461 50 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=7656.000000 s hg38.chr20_KI270870v1_alt 32071 30 + 183433 ttgattactatagctttataCTCAaatacc s gorGor5.CYUI01015848v1 430551 30 - 578057 TTGATTACTACAGCTTTATACTCAAATACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954489 30 - 110113093 TTGATTACCACAGCTTTATACTCAAATACT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042461 50 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e panTro5.chr20 66362262 67 + 66533130 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=66617.000000 s hg38.chr20_KI270870v1_alt 32101 133 + 183433 acactgtcttgattaccacagctttataCTCAaataccacactgtcttgattaccacagctttataCTCAaataccacactgtcttgattactacagctttataCTCAaataccacactgtcttgattactat s panTro5.chr20 66362329 133 + 66533130 ACACTGTCTTGATTACCACAGCTTTATACTCAAATGCCACACTGTCTTGATTAACACAGCTTTATACTCAAATACTACACTGTCTTGATTACTACAGCTTTATACTCAaataccacactgtcttgattaccac i panTro5.chr20 I 67 C 0 s gorGor5.CYUI01015848v1 430581 133 - 578057 ACACTGTCTTGATTACTACAGCTTTATACTGAaataccacactgtcttgattactacagctttataCTCAAATACTACACTGTTTTGATTACCACAGCTTTATACTCAAATACTACACCGTCTTGATTACCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954519 133 - 110113093 ACACTGTCTTGATTACCACAGCTTTATACTCAAATGCTACACTGTCTTGATTACGACAGCTTTATACTCAAATGCTACACTGTTTTGATTACTACAGGTTTATACGCAAATGCTACACCGTCTTGATTACCAC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e panPan2.chr20 62042461 50 + 62195757 T e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=319275.000000 s hg38.chr20_KI270870v1_alt 32234 362 + 183433 agctttataCTCAaataccacactgtcttgattactatagctttatactctgttttgaggtcaggtagtgtcagtccctctaacttcatttttcaaagttg-ttaggggattataggttctttgcaaatttctatgcaaattttggaatcagtttgttaatttccagaaaaaagcctcttgcaattttaattgcattaaatctatagatgagtttgggtagaatcggcatatggagttttctgatgcatgaacacagcataactcctatttacatctttaatttctctcagcagttttacggtttttaatgtatggcttctgtcagttgtatttctaggtatttcat-tttttgatgctattat s panTro5.chr20 66362462 363 + 66533130 agctttataCTCAaatactacactgtcttgattactatagctttatactctgttttgaggtcaggtagtgtcagtccctctaacttcatttttcaaagttg-ttaggggattataggttctttgcaaatttctatgcaaattttggaatcagtttgttaatttccacaaaaaagcctcttgcaattttaattgcattaaatctatagatgagtttgggtagaatcggcatatggagttttctgatccacgaacacagcaaaactcctatttacatctttaatttctctcagcagttttacagtttttaatgtatggcttctgtcagttgtatttctaggtatttcatatttttgatgctattat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042411 363 + 62195757 AGCTTTATACTCAaatactacactgtcttgattactatagctttatactctgttttgaggtcaggtagtgtcagtccctctaacttcatttttcaaagttg-ttaggggattataggttctttgcaaatttctatgcaaattttggaatcagtttgttaatttccacaaaaaagcctcttgcaattttaattgcattaaatctatagatgagtttgggtagaatcggcatatggagttttctgatccacgaacacagcaaaactcctatttacatctttaatttctctcagcagttttacagtttttaatgtatggcttctgtcagttgtatttctaggtatttcatatttttgatgctattat i panPan2.chr20 T 50 C 0 s gorGor5.CYUI01015848v1 430714 363 - 578057 AGCTTTATACTCAaatactacactgtcttgattactatagctttatattctgttttgaggtcaggtagtgtcagtccctctaacttcatttttcaaagttg-ttaggggattataggttctttgcaaatttctatgcaaattttggaatcagtttgttaatttccacaaaaaagcctcttgcaattttaattgcattaaatctatagatgagtttgggtagaataggcatatggagttttctgatccatgaacacagcataactcctatttacatctttaatttctctcagcagttttacagtttttaatgtatggcttctctcagttgtatttctaggtatttcagatttttgatgctattat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109954652 364 - 110113093 AGctttatactcaaatgctacaccgtcttgattacgacagctttatactctgttttgaggtcaggtagtgtgagtccctctaactttgtttttcaaagttgtttaggggattataggttctttgcaaatttctatgcaaattttagaatcaattcattaatttccacaaaaaagcctcttgcaattttaattgcattaaatctatagatcagtttgggtagaatcggtatatggcgttttctgatccatgaacacagcataactcctatttacatctttaatttctctcagcagttttacagtttttaatgtacggcttctgtcagttgtatttctaggtatttcatattttggatgctattat i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e colAng1.NW_012114444v1 5497024 1311 - 5823884 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=1365.000000 s hg38.chr20_KI270870v1_alt 32596 1 + 183433 a s panTro5.chr20 66362825 1 + 66533130 a i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042774 1 + 62195757 a i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 431077 1 - 578057 a i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109955016 1 - 110113093 a i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012114444v1 5498335 1 - 5823884 a i colAng1.NW_012114444v1 I 1311 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 152637 1138 + 156971 I e saiBol1.JH378156 16210808 5166 + 16356641 I e macNem1.NW_012014244v1 16820027 1134 - 16982598 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e calJac3.chr5 58146213 4988 + 159171411 I e aotNan1.NW_018500483v1 2611993 4670 + 11732439 I e rheMac8.chr10 92681881 2859 - 92844088 I e otoGar3.GL873542 22775505 5355 + 22939663 I e macFas5.chr10 96346410 1139 + 96509753 I a score=64413.000000 s hg38.chr20_KI270870v1_alt 32597 10 + 183433 aatagcattg s panTro5.chr20 66362826 10 + 66533130 aatagcattg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042775 10 + 62195757 aatagcattg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 431078 10 - 578057 aatagcattg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109955017 10 - 110113093 aatagcatta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92684740 10 - 92844088 aatagcatta i rheMac8.chr10 I 2859 C 0 s macFas5.chr10 96347549 10 + 96509753 aatagcatta i macFas5.chr10 I 1139 C 0 s macNem1.NW_012014244v1 16821161 10 - 16982598 aatagcatta i macNem1.NW_012014244v1 I 1134 C 0 s manLeu1.NW_012101369v1 153775 10 + 156971 aatagcatta i manLeu1.NW_012101369v1 I 1138 C 0 s colAng1.NW_012114444v1 5498336 10 - 5823884 aatagcatta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58151201 10 + 159171411 aatagcgtta i calJac3.chr5 I 4988 C 0 s saiBol1.JH378156 16215974 10 + 16356641 aatagcgtta i saiBol1.JH378156 I 5166 C 0 s aotNan1.NW_018500483v1 2616663 10 + 11732439 aatagcgtta i aotNan1.NW_018500483v1 I 4670 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e cebCap1.NW_016107870v1 1072979 8306 + 1231380 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=1433787.000000 s hg38.chr20_KI270870v1_alt 32607 200 + 183433 tttttaaaaatgttcatttgattattcgtttctaggatatagaaatcccatagatttttgtgtattgattttgtatcctgaaactttgctgaagttgcttattagttctagtagc-ttttttgtggattatacccaactttctacacagatgatcatgtctgtgaattagaca-attttttatttctaacctggacaccttt s panTro5.chr20 66362836 200 + 66533130 tttttaaaaatgttcatttgattattcgtttctaggacatagaaatcccatagatttttgtgtattgattttgtatcctgaaactttgctgaagttgcttattagttctagtagt-ttttttgtggattatacccaactttctacacagatgatcatgtctgtgaattagaca-attttttatttctaatctggacaccttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042785 200 + 62195757 tttttaaaaatgttcatttgattattcgtttctaggatatagaaatcccatagatttttgtgtattgattttgtatcctgaaactttgctgaagttgcttattagttctagtagt-ttttttgtggattatacccaactttctacacagatgatcatgtctgtgaattagaca-attttttatttctaatctggacaccttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 431088 200 - 578057 tttttaaaaatgttcatttgattattcgtttctaggatatagaaatcccatagatttttgtgtattgattttgtatcctgaaactttgctgaagttgcttattagttctagtagc-ttttttgtggattatacccaactttctacacagatgatcatgtctgtgaattagaca-attttttatttctaatctggacaccttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109955027 198 - 110113093 tttttaaaaactttcagttgattattcgtttctaggatatagaaatcctgtagatttttgtgtaatgattttgtatcctgaaac--tgctgaagttgcttattagttgtagtacc-ttttttgtggattatacccaactttctacacagatgatcatgtctgtgaattagaca-attttttctttctaatctggacaccttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92684750 200 - 92844088 tttttaaaaactttcatttgattgtttgttcctaggatatagaaatcccatagatttttgtgtattgattttgtatcctgacactttgttgaagttgcttattagttctagtagc-ttttttgtagattatacccaactttctacacagatgatcaggtctgtgaattagaca-attttttctttctaatctggacaccttt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96347559 200 + 96509753 tttttaaaaactttcatttgatcgtttgttcctaggatatagaaatcccatagatttttgtgtattgattttgtatcctgacactttgttgaagttgcttattagttctagtagc-ttttttgtagattatacccaactttctacacagatgatcaggtctgtgaattagaca-attttttctttctaatctggacaccttt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16821171 200 - 16982598 tttttaaaaactttcatttgatcgtttgttcctaggatatagaaatcccatagatttttgtgtattgattttgtatcctgacactttgttgaagttgcttattagttctagtagc-ttttttgtagattatacccaactttctacacagatgatcaggtctgtgaattagaca-attttttctttctaatctggacaccttt i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101369v1 153785 201 + 156971 tttttaaaaactttcattttatcgtttgttcctaggatatagaaatcccatagatttttgtgtattgattttgtatcctgacactttgctgaagttgcttattagttctagtagctttttttgtagattatacccaactttctacatagatgatcaggtctgtgaattagaca-attttttctttctaatctggacaccttt i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5498346 201 - 5823884 tttttaaaaactttcatttgattgttcgttcctaggatatagaaatcccatagatttttgtgtattgattttgtatcctgaaacttcgttgaagttgcttattagttctagtagc-ttttttgtagattatatccaactttctacacagatgatcaggtctgtgaattagacattttttttttttctaatctggacaccttt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58151211 198 + 159171411 tttttaaaaactttcatttgattatttgtttcttggatatagaaatcccatagatttttgtgtattaattttgtatcctgaaactttgctgaagttgcttattagttctagtagc-gtttttgtagcttgtacccacctttctacacagagaaccatgtc-gtgaattaggca-a-ttttcctttctgatctggacaccttt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16215984 198 + 16356641 tttttaaaaactttcatttgattgtttgtttcttggatatagaaatcccatagatttttgtgtattaattttgtatcctgaaactttgctgaaattgcttattagttctagtagc-gtttttgtagcttgtacccaccattctacacagaggaccacgtt-gtgaattaggca-a-ttttcctttctaatcccgacaccttt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1081285 198 + 1231380 tttttaaaaactttcatttgattatttgtttgttggatatagaaatcccatagatttttgtgtattaattttgtatcctgaaactttgctgaagttgcttattagttctagtagt-gtttttgtagcttgtacccacctttctgcatagaggaccatgtc-atgaattaggca-a-ttttcctttctaatcctgacaccttt i cebCap1.NW_016107870v1 I 8306 C 0 s aotNan1.NW_018500483v1 2616673 198 + 11732439 tttttaaaaactttcatttgattatttgtttcttggatatagaaatcccatagatttttgtgtattaattttgtatcctgaaactttgctgaagttgcttattagttctagtaac-gtctttgtagcttgtaccgacctgtctacacagaggaccatgtc-gtgaattaggca-a-ttttcctttctaatccggacaccttt i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3624513 805 - 3785965 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=461068.000000 s hg38.chr20_KI270870v1_alt 32807 61 + 183433 tatttctttttcttgccttattggtttggttagagtgtccagtacaatgttgagtag--aatt s panTro5.chr20 66363036 61 + 66533130 tatttctttttcttgccttattggtttggttagagtgtccagtacaatgttgagtag--aatt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62042985 61 + 62195757 tatttctttttcttgccttattggtttggttagagtgtccagtacaatgttgagtag--aatt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 431288 61 - 578057 tatttctttttcttgccttattggtttggtcagagtgtccagtacaatgttgagtag--aagt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109955225 60 - 110113093 tatttctttttctt-tcttattggtttggttagagtgtccagtacaatgttgaatag--aagt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92684950 61 - 92844088 tatttctttttcttaccttattggtttggttggaatgtccagtacaatgttgagtag--aagt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96347759 61 + 96509753 tatttctttttcttaccttattggtttggttggaatgtccagtacaatgttgagtag--aagt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16821371 61 - 16982598 tatttctttttcttaccttattggtttggttggaatgtccagtacaatgttgagtag--aagt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3625318 61 - 3785965 tatttctttttcttaccttattggtttggttggaatgtccagtccaatgttgagcag--aagt i cerAty1.NW_012001373v1 I 805 C 0 s manLeu1.NW_012101369v1 153986 61 + 156971 tatttctttttcttaccttattggtttggttggaatgtccagtccaatgttgagtag--aagt i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5498547 61 - 5823884 tgtttctttttcttaccttattggtttggttggaatgtccagtgcagtgttgagtag--aagt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58151409 58 + 159171411 --ta-ttttttcttgccttgttgatttgattagagtgttcagtacagtgtggagtag--aagc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16216182 61 + 16356641 --tatttttttcttgccttattggtttggttagagtgtccagtacaatgtggagtagaaaagc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1081483 59 + 1231380 --tatttttttcttgccttattggtttggtcagagtgtccagtacaatgtgcagtct--ggtt i cebCap1.NW_016107870v1 C 0 I 32 s aotNan1.NW_018500483v1 2616871 59 + 11732439 --tatttgtttcttgacttattggtctggttagagtgtccagtatgatgtggagcag--aagt i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=233686.000000 s hg38.chr20_KI270870v1_alt 32868 35 + 183433 gaacatccttgcctccgtcttgctctgaggagaga s panTro5.chr20 66363097 35 + 66533130 gaacatccttgcctccgtcttgctctgaggagaga i panTro5.chr20 C 0 C 0 s panPan2.chr20 62043046 35 + 62195757 gaacatccttgcctccgtcttgctctgaggagaga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 431349 35 - 578057 gaacatccttgcctccatcttgctctgaggagaga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109955285 35 - 110113093 gaacatccttgcctccgtcttgctctgaggagaga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92685011 35 - 92844088 ggacatccttgtctccgtcctgctctgaggggaga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96347820 35 + 96509753 ggacatccttgtctccgtcctgctctgaggggaga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16821432 35 - 16982598 ggacatccttgtctccgtcctgctctgaggggaga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3625379 35 - 3785965 ggacatccttgtctccgtcctgctctgaggggagg i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101369v1 154047 35 + 156971 ggacatccttgtctccgtcctgctctgaggggaga i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5498608 35 - 5823884 ggacatccttgcctccatcctgctctgaggggaga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58151467 35 + 159171411 gagcatcctcgcctcagtcttgctctgaggggcaa i calJac3.chr5 C 0 I 21 s saiBol1.JH378156 16216243 35 + 16356641 atgggtcctcgtctcagtctggctctgaggggcaa i saiBol1.JH378156 C 0 I 21 s aotNan1.NW_018500483v1 2616930 34 + 11732439 gagcatcctcgcctcagtcttgctctga-gggcaa i aotNan1.NW_018500483v1 C 0 I 21 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e cebCap1.NW_016107870v1 1081542 32 + 1231380 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=3424655.000000 s hg38.chr20_KI270870v1_alt 32903 426 + 183433 cat---ggattaagatttaacttgggtttttcatatcaggctgacacattct-cctattcctagtttgctgagagtctttatgagggatggattttagattttgtcaaatgct-ttttctgcgtctattatgataatcatgtg-tttccttttttagtttgttaatataacgaatcacactgattttgttaaactaaccttgcattctggaataaactctgcttggtcatattatagtatt-ttttcaaatattgatggattttgatttactaaaatgttgttaataatttttgcatctgtgtttatgagggatattggtctgtaattttttttcttgtggtgcttttggtatcagagtaatcttggcctcaatgaatgagttgggagacggtccctcttcttcagtttcctcaaagagttctgtgaaattgg s panTro5.chr20 66363132 424 + 66533130 cat---ggattaagatttaacttgggtttttcatatcaggctgacacattcttcctattcctagtttgctgagagtctttatgagggatggattttagattttgtcaaatgct-ttttctgcgtctattatgataatcatgtg-tttccttttttagtttgttaatataacgaatcacactgattttgttaaactaaccttgcattctggaataaactctgcttggtcatattatagtatt-ttttcaaatattgatggattttgatttactaaaatgttgttaataatttttgcatctgtgtttatgagggatattggtctgtaattttttttcttgtggtgcttttggtatcagagtaatcctggcctcaacgaatgagttgggagacagtccctcttc---agtttcctcaaagagttctgtgaaattgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62043081 426 + 62195757 cat---ggattaagatttaacttgggtttttcatatcaggctgacacattcttcctattcctagtttgctgagagtctttatgagggatggattttagattttgtcaaatgct-ttttctgcgtctattatgataatcatgtg-tttccttttttagtttgttaatataacgaatcacactgattttgttaaactaaccttgcattctggaataaactctgcttggtcatattatagtatt-ttttcaaatattgatggattttgatttactaaaatgttgttaataatttttgcatctgtgtttatgagggatattggtctgtaa-tttttttcttgtggtgcttttggtatcagagtaatcctggcctcaacgaatgagttgggagacagtccctcttcttcagtttcctcaaagagttctgtgaaattgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 431384 427 - 578057 cat---ggattaagatttaacttgggtttttcatatcaggctgacacattcttcctattcctagtttgctgagagtctttatgagggttggattttagattttgtcaaatgct-ttttctgcgtctattatgataatcatgtg-tttccttttttagtttgttaatataacgaatcacactgattttgttaaactaaccttgcattctggaataaactctgcttggtcatattatagtatt-ttttcgaatattgatggattttgatttactaaaatgttgttaataatttttgcatctgtgtttatgagggatattggtctgtaattttttttcttgtggtgcttttggtatcagagtaatcctggcctcaatgaatgagttgggagacagtccttcttcttcagtttcctcaaagagttctgtgaaattgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109955320 427 - 110113093 cat---gggttaagatttaacttgggtttttcatatcaggctgacgcattcttcctattcctagtttgctgagagtctttataaggaatggattttagattttgtcaaatgca-ttttctgcgtctattatgataatcatgtg-tttccttttttagtttgttaatataatgaatcacactgattttgttaaactaaccttgcattctggaataaaccctgcttggtcatattatagtatt-tttttgaatattgatggattttgatttactaaaattttgttaataatttttgcagctgtgtttatgagggatattggtctgtaattttttttcatgtggtgcttttggtatcagagtaatgctggcctcagtgaatgagttgggagacagtcccacttcttcagtttcctcaaagaattctgcgaaattgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92685046 430 - 92844088 cattatggagcatgacttaccttgggtttttcatatcaggctgacacatttttcctattcctagtttgctgagagtccttatgaggaacgggttttagattttgtcaaatgct-ttttctgcatgtattatgataatcatgtg-tttccttttttagtttgttaatatgatgaatcacactgattttgttaaaccaaccttgcattccggaataaaccctgcctggttatattatagtatt-ttttaaaatattgatggattttgatttactaaaattttgttaatgatttttgcatctgtgtttataagggatatcggtctgtaattttttttcttgtgatgcgtttggtatcagagtaatgccgacctcaacgaatgagttgggagacagtccctctttttcagttttctcaaagagttctgttaaatggg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96347855 429 + 96509753 cattatggagtatgacttacctggggtttttcataccaggctgacacattcttcctattcctagtttgctgagagtccttatgaggaacgggttttagattttgtcaaatgct-ttttctgcatgtattatgataatcatgtg-tttccttttttagtttgttaatatgatgaatcacactgattttgttaaaccaaccttgcattccggaataaaccctgcttggttatattatagta-t-ttttaaaatattgatggattttgatttactaaaattttgttaatgatttttgcatctgtgtttataagggatatcggtctgtaattttttttcttgtgatgcgtttggtatcagagtaatgccgacctcaacgaatgagttgggagacagtccctctttttcagttttctcaaagagttctgttaaatggg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16821467 430 - 16982598 cattatggagtatgacttaccttgggtttttcatatcaggctgacacattcttcctattcctagtttgctgagagtcctgatgaggaacgggttttagattttgtcaaatgct-ttttctgcatgtattatgataatcatgtg-tttccttttttagtttgttaatatggtgaatcacactgattttgttaaaccaaccttgcattctggaataaaccctgcttggttatattatagcatt-ttttaaaatattgatggattttgatttactaaaattttgttaatgatttttgcatctgtgtttataagggatatcggtctgtaattttttttcttgtgatgcgtttggtatcagagtaatgccgacctcaatgaatgagttgggagacagtccctctttttcagttttctcaaagagttctgttaaatggg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3625414 430 - 3785965 cattatggagtatgacttaccttgggtttttcatatcaggctgacacattcttcctattcctagtttgctgagagtctttatgaggaacgggttttagattttgtcaaatgct-ttttctgcatgtattatgataatcatgtg-tttccttttttagtttgttaatatgatgaatcatactgattttgttaaaccaaccttgcattccggaataaaccctgcttggttatattatagtatt-tttttaaatattgatggattttgatttactaaaattttgttaatgatttttgcatctgtgtttataagggatatcggtctgtaattttttttcttgtgatgcgtttggtatcagagtaatgccggcctcaacgaatgagttgggagacagtccctcttcttcagttttctcaaagagttCTGTTAAATGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101369v1 154082 430 + 156971 cattagggagtatgacttaccttgggtttttcatatcaggctgacacattcttcctattcctagtttgctgagagtctttatgaggaacgggttttagattttgtcaaatgct-ttttctgcatgtattatgataatcatgtg-tttccttttttagtttgttaatatgatgaatcacactgattttgttaaaccaaccttgcattctggaataaaccctgcttggttatattatagtatt-ttttaaaatagtgatggattttgatttactaaaattttgttaatgatttttgcttctgtgtttataagggatatcggtctgtaattttttttcttgtgatgcgtttggtatcagagtaatgccggcctcaacgaatgagttgggagacagtccctcttcttcagttttctcaaagagttctgttaaatggg i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5498643 429 - 5823884 cattatggagtatgacttaccttgggtttttcatatcaggctgacacgttcttcctattcctagtttgctgagagtctttatgaggaatggattttagattttgtcaaatgct-ttttcggcatctattatgataatcatgtg-tttccttttttagtttgttaatataatgaatcacactgattttgttaaaccaaccttgcattctggaataaaccctgcttggttatattatagta-t-ttaaaaaaaattgatggattttgatttactaaaattttgttaatgatttttacatctctgtttataagggatatttgtctgtaattttttttcttgtgatgcatttggtatcagggtaatgctggcctcaacgaatgagttgggagacagtcccttttcttcagttttctcaaagagttctgttaaatggg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58151523 424 + 159171411 ---tatggattatgatctaacttgggtttttaatatctggctgaggcattcttcctattcctagtttgctgagagactttatgaggagtgaatgttagattttgtcaaatgcc-tttactgcattgattatgataatcatgaattttccgttcttcatctgttaatatgatgaatcacattgattttgttaaactatccttgcattctggaagaaaccctgcttggcgatattatagtattctttttatatattgttggattttgatttactagaatttttaaaataatttttgcatctatgttcatgagggaaattggtctgtaa----ctttcttgtggtgcttttggt-tcagaggagagctggcctcagcaaatgagttgggagacagttcctcttcttcagttttctcaaagagttCTATAAAATGGG i calJac3.chr5 I 21 C 0 s saiBol1.JH378156 16216299 423 + 16356641 ---tatggattatgatctgacttgggtttttaatatccggctgaggcattcttcctagtcctagtttgctgagagtctttatgaggagtgaatgttagattttgtcaaatgccttttactgcattgattatgataatcatgagttttccttttttcgtctgttaatataatgaatcacattgattttgttaaactacccttgcattctggaataaaccctgcttggcgatattatagtattctttttatatattgttggattttgatttactaaaatttt---gttaatttttgcatctatgttcatgagggatattggtctgtaa----ctttcttgtagtgcttttggtatcagaggagagctggcctcagcaaatgagttgggagacagttcctcttcttcagatttctcgaagagttctgtaaaatggg i saiBol1.JH378156 I 21 C 0 s cebCap1.NW_016107870v1 1081574 425 + 1231380 ---tatggattatgatctaacttgggtttttaatatccggctgaggcattcttcctattcctagtttgctgagagcctttatgaggagtgaatgttagattttgtcaaatgcc-tttactgcatcgattatgataatcatgagttttcctttctttgtctgttaatataatgaatcacattgattttgttaaactatccttgcattctggaataaaccctgcttggcgatattatagtattctttttatatattgttggattttgatttactaaaattttgttaataatttttgcgtctatgttcatgagggatattggtctgtaa----ctttcttgtggtgcttttggtatcagaggagagctggcctcagcaaatgagttgggagacagtccctcttcttcagttttctcaaagagttctgtaaaatggg i cebCap1.NW_016107870v1 I 32 C 0 s aotNan1.NW_018500483v1 2616985 423 + 11732439 ---tatggattatgatctaacctgggtttttaatatccggctgagggattcttcctattcctagtttgctgagagtctttatgaggagtgaatgttagattttgtcaaatgcc-tttactgcattgattacgataatcacgagttttccttttttcgtctgttaatataacgaatcacatggattttgttgaactatccttgcattctggaataaaccctgcttggcgatattatagtattctttttatatattgttggattttgatttactaaaattttattaacaatttttgcgtctatgttcatgagggatattggtctgtaa----ctttcttgtggtgcttttggtatcagaggagagctggcctcagcaaacaagttgggagacagctcctcttctttggttttctcaaagagttctgtaaaatg-- i aotNan1.NW_018500483v1 I 21 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e chlSab2.chr2 90246493 1169 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=2093130.000000 s hg38.chr20_KI270870v1_alt 33329 220 + 183433 cattcttttctttttggagacagagtcttgctctgttgcccaggcaggagtggcgtgggtcacatcagggctcattgtagcctcaacgt-ctggcaaagtgatcctcccatctcagccttccaagtagctgg-accagaagtgtgagccaccacacctggctaatttttaatttttagtagagacggggtctcgccatgttgcccaggctggtcttgaactc s panTro5.chr20 66363556 220 + 66533130 cattcttttctttttggagacagagtcttgctctgttgcccaggcaggagtggcgtgggtcacatcagggctcattgtagcctcaacgt-ctggcaaagtgatcctcccatctcagccttccaagtagctgg-accagaagtgtgagccaccacacctggctaatttttaatttttagtagagacggggtctcgccatgttgcccaggctggtcttgaactc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62043507 220 + 62195757 cattcttttctttttggagacagagtcttgctctgttgcccaggcaggagtggcgtgggtcacatcagggctcattgtagcctcaacgt-ctggcaaagtgatcctcccatctcagccttccaagtagctgg-accagaagtgtgagccaccacacctggctaatttttaatttttagtagagacggggtctcgccatgttgcccaggctggtcttgaactc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 431811 220 - 578057 cattcttttctttttggagacagagtcttgctctgttgcccaggcaggagtggcgtgggtcacatcagggctcactgtagcctcaacgt-ctggcaaaatgatcctcccatctcagccttccaagtagctgg-accagaagtgtgagccaccacacctggctaatttttaatttttaatagagacggggtctcgccatgttgcccaggctgttcttgaactc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109955747 220 - 110113093 CAttcttttctttctggagacagagtcttgctctgttgcccaggcaggagtggcgtgggtcacatcagggctcactgtagcctcaactt-ctggcaaagtgatcctcccatctcagccttccaagtagctgg-accagaagtgtgagccaccacacctggctaatttttaatttttagtagagacagggtctcgccatgttgcccaggctggtcttgaactc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92685476 220 - 92844088 cattcttttctttttggagacagagtcttgctctgttgcccaggtaggagtggagtgggtcacatcagggctcactgtagcctcagctt-ccggcaaagtgatcct-acatctcagccttccaagtagctggaaccagaagtgtgcgccaccacacctggctaatttttaatttttagtagagacgggatctcactgtgttgcccaggctggtcttgaactc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96348284 220 + 96509753 cattcttttctttttggagacagagtcttgctctgttgcccaggtaggagtggagtgggtcacatcagggctcactgtagcctcagctt-ccggcaaagtgatcct-atatctcagccttccaagtagctggaaccagaagtgtgcaccaccacacctggctaatttttaatttttagtagagacgggatctcactgtgttgcccaggctggtcttgaactc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16821897 220 - 16982598 cattcttttctttttggagacagagtcttgctctgttgcccaggtaggagtggagtggatcacatcagggctcactgtagcctcagctt-ccggcaaagtgatcct-acatctcagccttccaagtagctggaaccagaagtgtgcgccaccacacctggctaatttttaatttttagtagagacgggatctcactgtgttgcccaggctggtcttgaactc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3625844 220 - 3785965 CAttcttttctttttggagacagagtcttgctctgttgcccaggtaggagtggagtaggtcacatcagggctcactgtagcctcagctt-ccggcaaagtgatcct-acatctcagccttccaagtagctggaaccagaagtgtgcgccaccacacctggctaatttttaatttttagtagagacgggatctcactgtgttgcccaggctggtcttgaactc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90247662 220 - 90373283 CAttcttttctttttggagacagagtcttgctctgttgcctaggtaggagtggagtgggtcacatcagggctcactgtagcctcagctt-ccggcaaagtgatcct-acatctcagccttccaagtagctggaaccagaagtgtgtgccaccacacctggctaatttttaatttttagtagagacgggatctcactgtgttgcccaggctggtcttgaactc i chlSab2.chr2 I 1169 C 0 s manLeu1.NW_012101369v1 154512 220 + 156971 cattcttttctttttggagacagagtcttgctctgttgcccaggtaggagtggagtgggtcacatcagggctcactgtagcctcagctt-ccggcaaagtgatcct-acatctcagccttccaagtagctggaaccagaagtgtgtgccaccacacctggctaatttttaatttttagtagagacgggatctcactgtgttgcccaggctggtcttgaactc i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5499072 220 - 5823884 cattcttttctttttggagacagagtcttgctctgttgctcaggtaggagtggagtgggtcacatcagggctcactgtagcctcaactt-ccggcaaagtgatcct-acatctcagccttccaagtagctggaaccagaagtgtgcgccaccacacctggctaatttttaatttttagtagagacgggagctcactgtgttgcccaggctggtcttgaactc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58151947 222 + 159171411 CAttcttttctttttggatacagagtcttgctctgttgcccaggcaggagtggagttggacacatcagggctcactgcagtctcaacctcccagcaaagtgatcttcccatctcagccttctgagtagctgggaccagaagtgtgtgctaccacatcttgctaatttttaatttttagtagagacgaggtctaaccatgttgcccaggctggtcttgaaGCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16216722 222 + 16356641 catttttttctttttggacactgagtcttgctctgttgcccaggcaggagtggcttgggtcacatcagggctcactgcagcctcaacctcccagcaaagtgatcttcccatctcagccttctaagtagccgggaccagaactgtgtgccaccatacctggctaatttttaatttttagtagagacgaggtctgaccatgttgcccaggctggtcttgaagtc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1081999 222 + 1231380 catttttttctttttggacacagagtcttgctctgttgtccaggcaggagtggagtgggtcacatcagggctcactgcagcctcaacctcccagcaaagtgatcttcccatctcagccttctaagtagccgggaccagaagtgtgtgccaccacacctggctaatttttaatttttagtagagacgaggtctgaccatgttgccctggctggtgttgaagtc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2617408 178 + 11732439 ------------------------------------------ggtaggagtggagtgggtcacatcagggctcactgcagcctcaacctcccagcagagtgatcttcccatctcag-cttctaagtagccgggaccagaagtttgtgccaccacacgtggctaatttttaatttttagtagagacgaggtctaaccatgttgccca-gctgatcttgaagtc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e otoGar3.GL873542 22775505 5355 + 22939663 I a score=2291959.000000 s hg38.chr20_KI270870v1_alt 33549 230 + 183433 cCCACACTCCAGGGATGACACCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG---------TTCGTTCCTGGAGCCCCTTGTGCTGCGTTGGCCCCTGCTT-GGTCCTGGTCTGTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTCACACCTCCCGCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCGTCTCCCCTCCTGTCTGAGATGCAGGGCATGACCA s panTro5.chr20 66363776 230 + 66533130 cCCACACTCCAGGGATGACACCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG---------TTCGTTCCTGGAGCCCCTTGTGCTGCGTTGGCCCCTGCTT-GGTCCTGGTCTGTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTCATACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCGTCTCCCCTCCTGTCTGAGATGCAGGGCATGACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62043727 230 + 62195757 cCCACACTCCAGGGATGACACCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG---------TTCGTTCCTGGAGCCCCTTGTGCTGCGTTGGCCCCTGCTT-GGTCCTGGTCTGTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTCATACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCGTCTCCCCTCCTGTCTGAGATGCAGGGCATGACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 432031 230 - 578057 cCCACACTCCAGGGATGACACCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG---------TTCGTTCCTGGAGCCCCTTGTGCTGCATTGGCCCCTGCTT-GGTCCTGGTCTGTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACTGTCTCCCCTCCTGTCTGAGATGCAGGGCGTGACCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109955967 228 - 110113093 cCAACACTCCAGGGATGACGCCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG---------TTCATTCCTGGAGGCCCTTGTGCTGCATTGGCCCCTGCTT-GCTCCTGGTCCGTCTGGACACCCTCA-GCTCTTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCGTCTCCCCTCCTGTTTGATATGT-TGGCATGACCA i nomLeu3.chr13 C 0 I 1353 s rheMac8.chr10 92685696 229 - 92844088 cCCACACTCCAGGAATGACACCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG----------TCATTCCTGGAGCCCCTTGTGCTGCACTGGCCCCTGCTT-GGTCCTGGTCCTTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTCCTGGTTCCAGGCAC----CTGCCCAGATGCCACTCCACCGTCTCCCCTCCTGTTTGAGATGCAGGGCAAGACCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96348504 229 + 96509753 cCCACACTCCAGGAATGACACCTTCACTCAAATCAC---------------------AGCCTCTCTGGCTG----------TCATTCCTGGAGCCCCTTGTGCTGCACTGGCCCCTGCTT-GGTCCTGGTCCTTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTCATACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCATCTCCCCTCCTGTTTGAGATGCAGGGCAAGACTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16822117 229 - 16982598 cCCACACTCCAGGAATGACACCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG----------TCATTCCTGGAGCCCCTTGTGCTGCACTGGCCCCTGCTT-GGTCCTGGTCCTTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCATCTCCCCTCCTGTTTGAGACGCAGGGCAAGACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3626064 192 - 3785965 cCCACACTCCAGGAATGACACCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG----------TCATTCCTGGAGCCCCTTGTGCTGCACTGGCC--------------------------------------CCTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCGTCTCCCCTCCTGTTTGAGACGCAGGGCAAGACCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90247882 229 - 90373283 ctCACACTCCAGGAATGACACCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG----------TCATTCCTGGAGCCCCTTGTGCTGCATTGGCCCCTGCTT-GGTCCTGGTCCTTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCGTCTCCCCTCCTGTTTGAGATGCAGGGCAAGACCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 154732 229 + 156971 cCCACACTCCAGGAATGACACCTTCACTCAAATCAC---------------------AGCCCCTCTGGCTG----------TCATTCCTGGAGCCCCTTGTGCTGCACTGGCCCCTGCTT-GGTCCTGGTCCTTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCATCTCCCCTCCTGTTTGAGACGCAGGGCAAGACCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5499292 228 - 5823884 cCCACACTCCAGGAATGACACCTTCACTCAAATCAC---------------------AGCC-CTCTGGCTG----------TCATTCCTGGAGTCCCTTGTGCTGCATTGGCCCCTGCTT-GGTCCTGGTCCTTCTGGCCACCCTCAGGCTCCTGCCTGGTGTGTAACACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGATGCCACTCCACCGTCTCCCCTCCTGTTTGAGACGCAGGGCAAGACCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58152169 259 + 159171411 TCCGCACTCCAGGGATGACACCTCCACTCAGATCACATGGAAACGTCGGGTCCCCAAAGCCCCTCTGGCTGTCCCCAAAATCCACTCCTGGAGCCCTTTGTGCTCTGTTGGCCTCTGCGT-GGTCCTGGCCTGTCTGGCCACCCCTGGGCTCCTTCCTGGTGTGTCACACCTCCCTCA-CTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGACACCTCTCCATTGGCTCCTCTCACATTTGAGACACACGGCACAACCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16216944 260 + 16356641 cCCACACTCCAGGGATGACACCCCCACTCAGATCACATGGAAATGTCAGGTCTCTCAAGCCCCTCTGGCTGTCCCCAAAATCCACTCCTGGAGCCCTTTGTGCTCTGTTGGCCCCTGCAT-GGTCCTGGCCCGTCTGGCCACCCCTGGGCTTCTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTTCTGGCTCCAGGCAC----CTGCCCAGACACCTCTTCACCGGCTTCTCTCCCGTTTGAGACACACGACATGACCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1082221 260 + 1231380 cCCACACTCCAGGGATGACACCTCCACTCAGATCACATGGAAACGTCAGGTCCCCAAAGGCCCTCTGGCTGTCCCCAAAATCCACTCCTGGAGCCCTTTGTGCTCTGTTGGGCCCTGCAT-GGTCCTGGCCCATCTGGCCACCCCTGGGCTCCTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTTCTGGCTCCAGGCAC----CTGCCCAGACTCCTCTCCAATGGCTCCTCTCCCGTTTGAGACACACAGCATGACCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2617586 261 + 11732439 cGCACACTCCAGGGATGACACCTCCACTCAGATCACATGGAAATGTCAGGTCCCCAAAGCCCCTCTGGCTGTCCCCAAAATCCGCTCCTGGAGACCTTTGTGCTCTGTTGGCCCCTGCATGGGGCCTGGCCCGTCTGGACACCCCTGGGCTCCTGCCTGGTGTGTCACACCTCCCTCATCTACTGTCCCTCCTGGCTCCAGGCAC----CTGCCCAGACACCTCTCCACCGGCTCCTCTCCCGTTTGAGGCACACGGCATGACCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 159504 254 - 22939663 CCCCCACCCCAGGGATGACACCGTCACATAGACCACATAGAAATATCAAGTCCCCAAAGCCCTTCTGGTTG---------TCAGTTCCTGGAGCCCTTCAGGCTTCTGTAGACCCTGCTC-AGGCCTGATCCCTGTGGCCATCCTTAGGCTCCTACCT-GTGTGTGACACCTGTCTCATCCACCATCCCTCCTAGCTCCAGGCCTCCTGCTGGCCAGATACCTCTCCTCCAGCTCCTCTCCTATTCCAGATATGGCCCATGACCA i otoGar3.GL873542 n 5355 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I a score=2123871.000000 s hg38.chr20_KI270870v1_alt 33779 247 + 183433 CG-GGTGCTGCTCTTAGAGCTTCATGCTCCGTCTGCCCCACTGGGAAGCAGCTGAGACCTCAGTCAGCCACCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCGTTCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACATGTGGGAAGATCCAGGCCAGTGGGACCT-------GGCCAAACTGGTGATGGGGAGCATCCCAGGGG-CTTGGGGACACTTGGTGGCCAAA-GGTTGGAG s panTro5.chr20 66364006 247 + 66533130 CG-GGTGCTGCTCTTAGAGCTTCATGCTCCGTCTGCCCCACTGGGAAGCAGCTGAGACCTCAGTCAGCCACCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCGTTCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACATGTGAGAAGATCCAGGCCAGGGGGACCT-------GGCCAAACTGGTGATGGGGAGCATCCCAGGGG-CTTGGGGACACTTGGTGGCCAAA-GGTTGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62043957 247 + 62195757 CG-GGTGCTGCTCTTAGAGCTTCATGCTCCGTCTGCCCCACTGGGAAGCAGCTGAGACCTCAGTAAGCCACCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCGTTTCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACATGTGGGAAGATCCAGGCCAGTGGGACCT-------GGCCAAACTGGTGATGGGGAGCATCCCAGGGG-CTTGGGGACACTTGGTGGCCAAA-GGTTGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 432261 247 - 578057 CG-GGTGCTGCTCTTAGAGCTTCATGCTCCGTCTGCCCCACTGGGAAGCAGCTGAGACCTCAGTCAGCCACCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCGTTCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACACGTGGGAAGATCCAGGCCAGTGGGACCT-------GGCCAAACTGGTGATGGGGAGCATCCCAGGGG-CTTGGGGACACTTGGTGGCCAAA-GGTTGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92685925 246 - 92844088 -C-GGTGCTGCTCTCAGAGCCTCATGCTCCGCCTGCCCCACTAGGAAGCAGCTGAGGCCTCAGTCAGCCTCCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCGTCCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACGTGTGGGAAGATCCAGGCCAGTGGGGCCT-------GGCCAAGCCGGTGATGGGGAGCCTCCC-GGGGCCTTGGGGACACGTGGGGGCCAAA-GGTTGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96348733 247 + 96509753 -C-GGTGCTGCTCTCAGAGCCTCATGCTCCGCCTGCCCCACTAGGAAGCAGCTGAGGCCTCAGTCAGCCTCCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCGTCCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACGTGTGGGAAGATCCAGGCCAGTGGGGCCT-------GGCCAAGCCGGTGATGGGGAGCCTCCCAGGGGCCTTGGGGACACGTGGGGGCCAAA-GGTTGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16822346 247 - 16982598 -C-GGTGCTGCTCTCAGAGCCTCATGCTCCGCCTGCCCCACTAGGAAGCAGCTGAGGCCTCAGTCAGCCTCCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCATCCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACGTGTGGGAAGATCCAGGCCAGTGGGGCCT-------GGCCAAGCCGGTGATGGGGAGCCTCCCAGGGGCCTTGGGGACACGTGGGGGCCAAA-GGTTGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3626256 247 - 3785965 -C-AGTGCTGCTCTCAGAGCCTCATGCTCCGCCTGCCCCACTAGGCAGCAGCTGAGGCCTCAGTCAGCCTCCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCGTCCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACGTGTGGGAAGATCCAGGCCAGTGGGGCCT-------GGCCACGCCGGTGATGGGGAGCCTCCCAGGGGCCTTGGGGACACGTGGGGGCCAAA-GGTTGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90248111 247 - 90373283 -C-GGTGCTGTTCTCAGAGCCTCATGCTCCGCCTGCCCCACTAGGAAGCAGCTGAGGCCTCAGTCAGCCTCCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCGTCCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACGTGTGGGAAGATCCAGGCCAGTGGGGCCT-------GGCCAAGCTGGTGATGGGGAGCCTCCCAGGGGCCTTGGGGACACGTGGGGGCCAAA-GGTTGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 154961 247 + 156971 -C-GGTGCTGCTCTCAGAGCCTCATGCTCCGCCTGCCCCACTAGGCAGCAGCTGAGGCCTCAGTCAGCCTCCTTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAGTCCCGTCCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACGTGTGGGAAGATCCAGGCCAGTGGGGCCT-------GGTCAAGCCGGTGATGGGGAGCCTCCCAGCGGCCTTGGGGACACGTGGGGGCCAAA-GGTTGGAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5499520 248 - 5823884 -CGGGTGCTGCTCCCAGAGCCTTATGCCCCACCTGCCCCACTAGGAAGCAGCTGAGGCCTCAGTCAGCCTCATTGGGGGCCCAGATTAGTTTGAGACACTTGAGACCTGTTAAATCCCGTCCCACAG---ACCCCTCTGAGCCTCGTCCATCACCACATGCGTGGGAAGATCCAGGCCAGTAGGGCCT-------GGCCAAGCTGGTGATGGGGAGCCTCCCAGGGGCCTTGGGGACACGTGGGGGCCAAA-GGTTGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58152428 219 + 159171411 TG-GGTGCT---------------------------TCCACTGGGAAGCAGCTGAGGCCTCAGGTGGCCTCCTT-GGGGCCCATATTAGTTTGAGACACTTGAGGCCTGTTAAGTTCCATCCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACATGTGGGAAGATCCAGGCCAGTGGGGCCC-------AGCCAAGCTGGGGATGGGGAGCATCCCAGGGA-GCTGGGGACTCTTGGAGGCCAAA-GGTTGGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16217204 242 + 16356641 TG-GGTGCTGCGATCAGAGCTCCATGCT----CTGCTCCACTGGGAAGCAGCTGAGGCCTCAGGTGGCCTCCTT-GGGGCCCAGATTAGTTTGAGACACTTGAGGCCTGTTAAGTTCCATCCCACAG---ACCCCTCTGAACCTCCTCCATCACCACACATGTGGGAAGATCCAGGCCAGTGGGGCCC-------AGCCAAGCTGGGGATAGGGAGCATCCCAGGGA-GTTGGGGACACTTGGAGGCCAAA-GGTTGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1082481 246 + 1231380 TG-GGTGCTGCGATCAGAGCTCCATGCTCTGCCTGCTCCACTGGGAAGCAGCTGAGGCCTCAGGTGGCCTCCTT-GGGGCCCAGATTAGTTTGAGACACTTGAGGCCTGTTAAGTTCCATCCCACAG---ACCCCTCTGAGCCTCCTCCATCACCACACATGTGGGAAGATCCAGGCCAGTGGGGCCC-------AGCCAAGCTGGAGATGGGGAGCATCCCAGGGA-GTTGGGGACACTTGGAGGCCAAC-GGTTGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2617847 249 + 11732439 CG-GGTGCTGCGATCAGAGCTCCATGCTGTGCCCGCTCCACTGGGAAGCAGCTGAGGCCTCAGGCGGCCTCCTT-GGGGCCCAGATTAGTTTGAGACACTTGCGGCCTCTTAAGTTCCATCCCACAGACAACCCCTCTGAGCCTCCTCCATCACCACACATGTGGGAAGATCCAGGCCAGTGGGGCCC-------AGCCAAGCTGGGGATGGGGAGCATCCCAGGGC-GTTGAGAACACTTGGAGGCCAAA-GGTTGGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 159758 199 - 22939663 CC-AGTGTTGCTCTAAGAGCTCCACACTGCTCCTGTCCAGCTGGG-------------------TAGACTCCTCTGAGGCCCAGG------------ATTGGAGGCTT-----------CCTCACAA---ACCC--TTGAACCTCCTCTG-------AGAGGAGGGAAGGTCTAGGCTAGTGGGGCCCGGATGTGGGCCCAGC------TGCAGAGCATTGCAGTGACTGAGGGGAAGTTAGGGGGCCAAAGGGTTGGAG i otoGar3.GL873542 C 0 n 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e nomLeu3.chr13 109956195 1353 - 110113093 I a score=1075364.000000 s hg38.chr20_KI270870v1_alt 34026 143 + 183433 AGGGTGGAGGATGCTCA--------------GCCAGAG------CCGGAGCAGCCCCTTTGGTGGGACaattgcagaaaactgatagtaacgcaaacaattcttgttc-tagaactgcaaaggagttttgtccagaggaATGAAGTAGATGAGTGTTTTGTGGA s panTro5.chr20 66364253 143 + 66533130 AGGGTGGAGGATGCTCA--------------GCCAGAG------CCGGAGCAGCCCCTTTGGTGGGACaattgcagaaaactgatagtaatgcaaacaattcttgttc-tagaactgcaaaggagttttgtccagaggaATGAAGTAGATGAGTGTTTTGTGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62044204 143 + 62195757 AGGGTGGAGGATGCTCA--------------GCCAGAG------CCGGAGCAGCCCCTTTGGTGGGACaattgcagaaaactgatagtaatgcaaacaattcttgttc-tagaactgcaaaggagttttgtccagaggaATGAAGTAGATGAGTGTTTTGTGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 432508 143 - 578057 AGGGTGGAGGATGCTCA--------------GCCAGAG------CCGGAGCAACCCCTTTGGTGGGACaattgcagaaaactgatagtaatgcaaacaattcttgttc-tagaactgcaaaggagttttgtccagaggaATGAAGCAGATGAGTGTTTTGTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92686171 142 - 92844088 AGGATGGAGGCTGCTCA--------------GCCAGGGCCAGAACCAGAGCAGCCCTTTCGGTGGGACagttgtggaaagctgacagtaatgcaaacagttcttgttcataggactgcaaaggagttttgtccggaggaatgaagta--------ttttgtgga i rheMac8.chr10 C 0 I 16 s macFas5.chr10 96348980 142 + 96509753 AGGATGGAGGCTGCTCA--------------GCCAGGGCCAGAACCAGAGCAGCCCTTTCGGTGGGACagttgtggaaagctgacagtaatgcaaacagttcttgttcataggactgcaaaggagttttgtccggaggaATGAAGTA--------TTTTGTGGA i macFas5.chr10 C 0 I 16 s macNem1.NW_012014244v1 16822593 142 - 16982598 AGGATGGAGGCTGCTCA--------------GCCAGGGCCAGAACCAGAGCAGCCCTTTCGGTGGGACagttgtggaaagctgacagtaatgcaaacagttcttgttcataggactgcaaaggagttttgtccggaggaatgaagta--------ttttgtgga i macNem1.NW_012014244v1 C 0 I 16 s cerAty1.NW_012001373v1 3626503 142 - 3785965 AGGATGGAGGCTGCTCA--------------GCCAGGGCCAGAACCAGAGCAGCCCTTTCGGTGGGACagttgtggaaagctgacagtaatgcaaacagttcttgttcataggactgcaaaggagttttgtccggaggaatgaagta--------ttttgtgga i cerAty1.NW_012001373v1 C 0 I 16 s chlSab2.chr2 90248358 142 - 90373283 AGGATGGAGGCTGCTCA--------------GCCAGGGCTGGAACCAGAGCAGCCCTTTTGGTGGGACagttgtggaaagctgatagtaatgcaaacagttcttgttcataggactgcaaaggagttttgtccggaggaatgaagta--------ttttgtgga i chlSab2.chr2 C 0 I 16 s manLeu1.NW_012101369v1 155208 142 + 156971 AGGATGGAGGCTGCTCA--------------GCCAGGGCCAGAACCAGAGCAGCCCTTTCGGTGGGACagttgtggaaagctgacagtaatgcaaacagttcttgttcataggactgcaaaggagttttgtccagaggaatgaagta--------ttttgtgga i manLeu1.NW_012101369v1 C 0 I 16 s colAng1.NW_012114444v1 5499768 142 - 5823884 AGGATGGAGGCTGCCCA--------------GCCAGGGCCAGAACCAGAGCAGCCCTTTGGGCGGGACagttgtggaaagctgatagtaatgccaacagttcttgttcgtaggactgcaaaggagttttgtccagaggaATGAAGTA--------TTTTGTGGA i colAng1.NW_012114444v1 C 0 I 16 s calJac3.chr5 58152647 144 + 159171411 AGGGTGGAGGCTGCTCA--------------GCCAGAG------CCAGAGCAGCCCCTTGGGTGGGACCATTGCAGAAAATGGATAGTCATTCAAACCGTGCTTGCTTGTCGAACTGCAAAGGAGTTTTGTCCAGAGGAATGAAGTAGGTGACTGTTTTGTAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16217446 158 + 16356641 AGGGTGGAGGCTGCTCAGCCAGAGCTGAGAGGCCAGAG------CCAGAGCAGCCCCTTGGGTGGGACCATTGCAGAAAACGGAGAGTAATGCAAACCGTGCTTGCTCGTCGAACTGCAAAGGAGTTTTGTCCAGAGGAGTGAAGTAGGTGACTGTTCTGTGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1082727 158 + 1231380 AGGGCGGAGGCTGCTCAGCCAGATCTGAGAGGCCAGAG------CCAGAGCAGCCCCTTGGGTGGGACCATTGCAGAAAACGGGTAGTAATGCAAACCGCGCTTGCTCGTTGAACTGCAAAGGAGTTTTGTCCAGAGGAGTGAAGTAGATGACTGTTTTGTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2618096 144 + 11732439 AGGGTGGAGGCTGCTCA--------------GCCAGAG------CCAGAGCAGCCCCTCGGGTGGGACCGTTGCAGAAAACGGGTAGTAATGCAAACCGTGCTTGCTCGTCGAACTGCAAAGGAGTTTTGTCCGGAGGAATGAAGTAGGTGACTGTTTCGTGGA i aotNan1.NW_018500483v1 C 0 I 141 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e nomLeu3.chr13 109956195 1353 - 110113093 I e otoGar3.GL873542 159957 0 - 22939663 I a score=1911.000000 s hg38.chr20_KI270870v1_alt 34169 1 + 183433 T s panTro5.chr20 66364396 1 + 66533130 T i panTro5.chr20 C 0 I 15 s panPan2.chr20 62044347 1 + 62195757 T i panPan2.chr20 C 0 I 15 s gorGor5.CYUI01015848v1 432651 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 I 15 s calJac3.chr5 58152791 1 + 159171411 T i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16217604 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1082885 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 I 25 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3626645 16 - 3785965 I e colAng1.NW_012114444v1 5499910 16 - 5823884 I e chlSab2.chr2 90248500 16 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e manLeu1.NW_012101369v1 155350 16 + 156971 I e macNem1.NW_012014244v1 16822735 16 - 16982598 I e aotNan1.NW_018500483v1 2618240 141 + 11732439 I e nomLeu3.chr13 109956195 1353 - 110113093 I e rheMac8.chr10 92686313 16 - 92844088 I e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96349122 16 + 96509753 I a score=68937.000000 s hg38.chr20_KI270870v1_alt 34170 10 + 183433 ----GTCTATTTCA s panTro5.chr20 66364412 10 + 66533130 ----GTCTATTTCA i panTro5.chr20 I 15 C 0 s panPan2.chr20 62044363 10 + 62195757 ----GTCTATTTCA i panPan2.chr20 I 15 C 0 s gorGor5.CYUI01015848v1 432667 10 - 578057 ----GTCTATTTCA i gorGor5.CYUI01015848v1 I 15 C 0 s nomLeu3.chr13 109957548 10 - 110113093 ----GTCTATTTCA i nomLeu3.chr13 I 1353 C 0 s rheMac8.chr10 92686329 10 - 92844088 ----gtctatttCA i rheMac8.chr10 I 16 I 1 s macFas5.chr10 96349138 10 + 96509753 ----GTCTGTTTCA i macFas5.chr10 I 16 I 1 s macNem1.NW_012014244v1 16822751 10 - 16982598 ----gtctatttCA i macNem1.NW_012014244v1 I 16 I 1 s cerAty1.NW_012001373v1 3626661 10 - 3785965 ----gtctatttCA i cerAty1.NW_012001373v1 I 16 I 1 s chlSab2.chr2 90248516 10 - 90373283 ----gtctatttCA i chlSab2.chr2 I 16 I 1 s manLeu1.NW_012101369v1 155366 10 + 156971 ----gtctatttCA i manLeu1.NW_012101369v1 I 16 I 1 s colAng1.NW_012114444v1 5499926 10 - 5823884 ----GTCTATTTCA i colAng1.NW_012114444v1 I 16 I 1 s calJac3.chr5 58152792 14 + 159171411 ATTGGCCTGTTCTA i calJac3.chr5 C 0 I 11 s saiBol1.JH378156 16217605 14 + 16356641 GTGGGCCTATTCTG i saiBol1.JH378156 C 0 I 11 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e cebCap1.NW_016107870v1 1082886 25 + 1231380 I e aotNan1.NW_018500483v1 2618240 141 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=852632.000000 s hg38.chr20_KI270870v1_alt 34180 113 + 183433 CACCCTGGATTGTCGATCGTGGTTTGGGTCCTCCTTGGAACTGGGCTCCTAACGCTCAACAGGCTTCTTCATTCATTATtgttgggggttgagttgtgtctcctaaaagatat s panTro5.chr20 66364422 113 + 66533130 CACCCTGGATTGTCGATCGTGGTTTGGGTCCTCCTTGGAACTGGGCTCCTAACGCTCAACAGGCTTCGTCATTCATTATtgttgggggttgagttgtgtctcctaaaagatat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62044373 113 + 62195757 CACCCTGGATTGTCGATCGTGGTTTGGGTCCTCCTTGGAACTGGGCTCCTAACGCTCAACAGGCTTCGTCATTCATTATtgttgggggttgagttgtgtctcctaaaagatat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 432677 113 - 578057 CACCCTGGATTGTCGATCGTGGTTTGGGTCCTCCTTGGAACTGGGCTCCTAATGCTCAACAGGCTTCTTCATTCATTATtgttgggggttgagttgtgtctcctaaaagatat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109957558 112 - 110113093 CACCCTGGATCGTCGATCGTGTTTTGGGTCCTCCTTGGAACTGGGCT-CTAACGCTCAACAGGTTTCTTCATTCGTTATtgttgggggttgagttgtgtctcctaaaagatgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92686340 110 - 92844088 CACCCTGGATTGTCGACAGTGATTTGGGTCCTCCTTGGAACTGGGCT-CTAACGCTCA--AGTCGTCTTCGTTCGTTAGtgttgagggttgagttgtgtctcctaaaagatat i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96349149 110 + 96509753 CACCCTGGATTGTCCACAGTGATTTGGGTCCTCCTTGGAACTGGGCT-CTAACGCTCA--AGTCTTCTTCGTTCGTTAGtgttgagggttgagttgtgtctcctaaaagatat i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16822762 110 - 16982598 CACCCTGGATTGTTGACAGTGATTTGGGTCCTCCTTGGAACTGGGCT-CTAACGCTCA--AGTCTTCTTCGTTCGTTAGtgttgagggttgagttgtgtctcctaaaagatat i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3626672 110 - 3785965 CACCCTGGATTGTCGACAGTGATTTGGGTCCTCCTTGGAACTGGGCT-CTAACGCTCA--AGTCTTCTTCGTTCGCTAGtgttgagggttgagttgtgtctcctaaaagatat i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90248527 110 - 90373283 CACCCTGGATTGTCAACAGTTATTTGGGTCCTCCTTGGAACTGGGCT-CTAACGCTCA--AGTCTTCTTCATTTGTTAGtgttgagggttgagttgtgtctcctaaaagatat i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101369v1 155377 110 + 156971 CACCCTGGATTGTCAACAGTGATTTGGGTCCTCCTTGGAACTGGGCT-GTAACGCTCA--AGTCTTCTTCGTTCGTTAGtgttgagggttgagttgtgtctcctaaaagatat i manLeu1.NW_012101369v1 I 1 C 0 s colAng1.NW_012114444v1 5499937 110 - 5823884 CACCCTGGATCGTCAGCAGTGGTTTGGGTCCTCCTTGGAACTGGGCT-CTAACGCTCA--AGTCTTCTTCGTTCGTTAGtgttgagggttgagttgtgtctcctaaaagatat i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chr5 58152817 100 + 159171411 CACCCTGGATTGTCGGTGGTGGTTTAGGTCCTCCTTGAAACTGGACT-CGGACTCTCAAGAAGGTGCTTCACTCATTAGT------------Gttgtgtctcctaaaagagat i calJac3.chr5 I 11 C 0 s saiBol1.JH378156 16217630 112 + 16356641 CACCCTGGACTGTCGGTGGTGGTTTAGATCCTCCTTGGAACTGGGCT-CTGACTCTCAACAAGCTGCGTCACTCATTAGtgttggggattgagttgtgtcacctaaaagagat i saiBol1.JH378156 I 11 C 0 s cebCap1.NW_016107870v1 1082911 112 + 1231380 CACCCTGGACTGTCGGTGGTGGTTTAGGTCCTCCTTGGAACTGGACT-CTGACTCTCAACAAGCTGCTTCACTCATTAGtgttggggattgagttgtgtctccgaaaagagat i cebCap1.NW_016107870v1 I 25 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e aotNan1.NW_018500483v1 2618240 141 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=17857.000000 s hg38.chr20_KI270870v1_alt 34293 3 + 183433 gtt s panTro5.chr20 66364535 3 + 66533130 gct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62044486 3 + 62195757 gct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 432790 3 - 578057 gtt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109957670 3 - 110113093 gtt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92686450 3 - 92844088 gtt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96349259 3 + 96509753 gtt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16822872 3 - 16982598 gtt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3626782 3 - 3785965 gtt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90248637 3 - 90373283 gtt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 155487 3 + 156971 gtt i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5500047 3 - 5823884 gtt i colAng1.NW_012114444v1 C 0 C 0 s cebCap1.NW_016107870v1 1083023 3 + 1231380 gtc i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e saiBol1.JH378156 16217742 0 + 16356641 C e calJac3.chr5 58152917 0 + 159171411 C e aotNan1.NW_018500483v1 2618240 141 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=1591555.000000 s hg38.chr20_KI270870v1_alt 34296 308 + 183433 ggagcctcagccgggcgcggtggctcacgcctgtaatcgcggcactttgggaggctgaggcgggtggatcacgaggtcaagagatcgagaccatcgtggccaacataatgaaaccccgtctctactaaaaaaatacaaaaattagccgggtgaggtggcaggcgcctgtagtcccagctactcgggaggctgaggctgaagaatcacttgaacacgggaggcgggggttgcagtgaaccgtgattgtgccactgcactgcagcctggcgacagagtgagactccgtcaaaaaaaaaaaaaaaaaaaaa- s panTro5.chr20 66364538 308 + 66533130 ggagtctcagccgggcgcggtggctcacgcctgtaatcgcggcactttgggaggctgaggcgggcggatcacgaggtcaagagatcgagaccatcgtggccaacataatgaaaccccgtctctactaaaaaaata-aaaaattagccgcgtgaggtggcaggcgcctgtagtcccagctactcgggaggctgaggctgaagaatcacttgaacacgggaggcgggggttgcagtgagccgtgattgcgccactgcactgcagcctggcgacagagtgagactccatcaaaaaaaaaaaaaaaaaaaaaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62044489 302 + 62195757 ggagtctcagccgggcgcggtggctcacgcctgtaatcgcggcactttgggaggctgaggcgggcggatcacgaggtcaagagatcgagaccatcgtggccaacataatgaaaccccgtctctactaaaaaaatacaaaaattagccgcgtgaggtggcaggcgcctgtagtcccagctactcgggaggctgaggctgaagaatcacttgaacacgggaggcgggggttgcagtgagccgtgattgcgccactgcactgcagcctggcgacagagtgagactccgtcaaaaaaaaaaaaaaa------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 432793 304 - 578057 ggagtctcagccgggcg-ggtggctcacgcctgtaatcgtggcactttgggaggctgaggcgggcagatcacgaggtcaagagatcgagaccatcctggccaacataatgaaaccctgtctctactaaaaaaatacaaaaattagccgggtgaggtggcaggcgcctgtagtcccagctactcgggaggctgaggctgaagaatcacttgaacccgggaggcggaagttgcagtgagccgtgattgtgccactgcactgcagcctggcgacagagtgagactccgtcaaaaaaaaaaaaagatac---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109957673 304 - 110113093 ggagtctcggccgggcgcggtggctcacacctgtaatcgcggcactttgggaggctgaggcgggcggatcacgaggtcaagagatcgagaccatcctggccaacatgatgaaaccccgtctctactaaaaaaatacaaaaattagccaggtgcggtggcaggcgcctgtagtcccagctactcgggaggccaaggctgaagaatcacttgaacctgggaggcggaggttgcagtgagctgtgattgcgccactgcact-cagcctggcgacagagtgagcctccatcaaaaataaaaaaagatac---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92686453 301 - 92844088 ggagtctcggccgggtgcggtggctcacgcctgtaatcccggcactttgggaggccaaggcgggtggatcacgaggtcaagagatcaagaccatcctggccaacataatgaaaccctgtgtctactaaaaaaatacaaaaattagctgggcgtggtggcacatgcctgtagtcccagctactcgggaggctgaggctggagaatcacttgaacccgggaggcagaggttgcaatgagccgtgatcgcgccactgccctccagcctggcgacagagtgagactctgtcta----aaaaaaaggtac---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96349262 301 + 96509753 ggagtctcggccgggcgcggtggctcacgcctgtaatcccggcactttgggaggccaaggcgggtggatcacgaggtcaagagatcaagaccatcctggccaacataatgaaaccctgtgtctactaaaaaaatacaaaaattagctgggcgtggtggcacatgcctgtagtcccagctactcgggaggctgaggctggagaatcacttgaacccgggaggcagaggttgcaacgagccgtgatcgcgccactgccctccagcctggcgacagagtgagactctgtcta----aaaaaaaggtac---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16822875 301 - 16982598 ggagtctcggccgggcgcggtggctcacgcctgtaatcccggcactttgggaggccaaggcgggtggatcacgaggtcaagagatcaagaccatcctggccaacataatgaaaccctgtgtctactaaaaaaatacaaaaattagctgggcgtggtggcacatgcctgtagtcccagctactcgggaggctgaggctggagaatcacttgaacccgggaggcagaggttgcaatgagccgtgatcgcgccactgccctccagcctggcgacagagtgagactctgtcta----aaaaaaaggtac---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3626785 299 - 3785965 ggagtctcggccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcacgaggtcaagagatcaagaccatcctggccaacataatgaaaccctgtctctact-aaaaaatacaaaaattagctgggcgtggtggcacttgcctgtagtcccagctactcgggaggctgaggctggagaatcacttgaacccgggaggcagaggttgcaatgagccgtgatcgcgccactgccctccagcctggcgacagagtgagactctgtct-----aaaaaaaggtac---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90248640 301 - 90373283 ggagtctcggccgggcatggtggctcacgcctgtaatcccggcactttgggaggccaaggtgggtggatcacgagatcaagagatcaagaccatcctcgccaacataatgaaaccctgtatctactaaaaaaatacaaaaattagctgggcgtggtggcacatgcctgtagtcccagctactcgggaggctgaggctggagaatcacttgaacctgtgaggcagaggttgcaatgagccgtgatcgcgccactgccctccagcctggcgacagagtgagactctgtcta----aaaaaaagatac---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 155490 300 + 156971 ggagtgtcagccgggcgcggtggctcacgcctgtaatcccggcactttgggaggccaaggcgggtggatcacgaggtcaagagatcaagaccatcctggccaacataatgaaaccctgtctctact-aaaaaatacaaaaattagctgggcgtggttgcacttgcctgtagtcccagctactcgggaggctgaggctggagaatcacttgaacccgggaagcagaggttgcaatgagccgtgatcgcgccactgccctccagcctggcgacagagtgagactctgtcta----aaaaaaaggtac---- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5500050 287 - 5823884 ggagtctcggccgggcgcggtgtctcacgcctataatcccggccctttgggaggccgaggtgggtggatcacgaggtcaagagatcgagaccatcctggccaacttaatgaaaccctgtctctactacaaaaatacaaaaattagctgggcgtggtggcacacgcctgtg-------------gggaggctgaggctgcagaatcatttgaacctgggagtcagaggttgcgatgagccatgatcgcgccactgccctccagcctggcgacagagtgagactctgtct-----aaaaaaagatac---- i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e saiBol1.JH378156 16217742 0 + 16356641 C e cebCap1.NW_016107870v1 1083026 0 + 1231380 C e calJac3.chr5 58152917 0 + 159171411 C e aotNan1.NW_018500483v1 2618240 141 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=15863.000000 s hg38.chr20_KI270870v1_alt 34604 3 + 183433 gtt s panTro5.chr20 66364846 3 + 66533130 gtt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62044791 3 + 62195757 gtt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433097 3 - 578057 gtt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109957977 3 - 110113093 gtt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92686754 3 - 92844088 gtt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96349563 3 + 96509753 gtt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16823176 3 - 16982598 att i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627084 3 - 3785965 att i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90248941 3 - 90373283 att i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 155790 3 + 156971 gtt i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5500337 3 - 5823884 act i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58152917 3 + 159171411 gtc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16217742 3 + 16356641 gtc i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e cebCap1.NW_016107870v1 1083026 0 + 1231380 C e aotNan1.NW_018500483v1 2618240 141 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=1863056.000000 s hg38.chr20_KI270870v1_alt 34607 206 + 183433 ggagtctcaacccccagcacctgtgagtgtgaccttgtttggaagtggggtctttgcagatttaattagtccatttgagaccatggtggacttgggtgtccttacaagaagagggaaatttg------gacacagaagatgcagaggacagtgctgtgtgaagacagaagtggtggaggctggagggatgcgtctgtgagccagggagcatc s panTro5.chr20 66364849 206 + 66533130 ggagtctcatcccccagcacctgtgagtgtgaccttgtttggaagtggggtctttgcagatttaattagtccatttgaggccatggtggacttgggtgtccttagaagaagagggaaatttg------gacacagaagatgcagaggacagtgctgtgtgaagacacaagtggtggaggctggagggatgcgtctgtgagccagggagcatc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62044794 206 + 62195757 ggagtctcaacccccagcacctgtgagtgtgaccttgtttggaagtggggtctttgcagatttaattagtccatttgaggccatggtggacttgggtgtccttagaagaagagggaaatttg------gacacagaagatgcagaggacagtgctgtgtgaagacacaagtggtggaggctggagggatgcgtctgtgagccagggagcatc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433100 205 - 578057 ggagtc-caacccccagcacctgtgagtgtggccttgtttggaagtggggtctttgcagatttaattagtccacttgaggccatggtggacttgggtgtccttacaagaagagggaaatttg------gacacagaagatgcagaggacagtgctgtgtgaagacagaagtggtggaggctggagggatgcgtctgtgagccagggagcatc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109957980 205 - 110113093 ggagtctcaa-ccccagcacctgtgagtgtgacctggtttggaagtggggtctttgcagatttaattagtccatttgaggccgtggtggactggggtgcccttacaagaagagggaaatttg------gacacagaagatgcagaggacagtgctgtgtgaagacagaagtggtggaggctggagggatgcatctgtgagccagggagcatc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92686757 209 - 92844088 ggagtctcaacccccagcacctgtgagtgtgaccttgtttggaagcagggtctttgcagattgaattagtcaatttgaggccatggt-gact-gggtgtctttacaagaagagggcagtgtgggcccagacacagaagatgcaggggacagtgctgtgtgaagacgggagtggt-gaggccggagggctgcgtctgtgagccggggagcatc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96349566 208 + 96509753 ggagtctcaacccccagca-ctgtgagtgtgaccttgtttggaagcagggtctttgcagattgaattagtcaatttgaggccatggt-gact-gggtgtctttacaagaagagggcagtgtgggcccagacacagaagatgcaggggacagcgctgtgtgaagacaggagtggt-gaggccggagggctgcgtctgtgagccggggagcatc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16823179 209 - 16982598 ggagtctcaacccccagcacctgtgagtgtgaccttgtttggaagcagggtctttgcagatttaattagtcaatttgaggccatggtggactggggtgtctttacaagaagagggcagtgtgggcccagacacagaagatgcaggggacagcgc--tgtgaagacaggagtggt-gaggctggagggatgcgtctgtgagccagggagcatc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627087 207 - 3785965 ggagtctcaacccccagcacctgtgagtgtgaccttgtttggaagcagggtctttgcagat----ttagtcaatttgaggccatggtggactggggtgtctttacaagaagagggcagtgtgggcccagacacagaagatgcaggggacagtgctgtgtgaagacaggagtggt-gaggctggagggatgcgtctgtgagccagggagcatc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90248944 209 - 90373283 ggagtctcaacccccagcacctgtgagtgtgaccttgtttggaagcagggtctttgcagatttaattagtcaatttgaggccatggtggactggggtgtctttacaagaagagggcagtgtgggcccag--acagaagatgcaggggacggtgctgtgtgaagacaggagtggt-gaggctggggggatgcgtctgtgagccagggagcatc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 155793 211 + 156971 ggagtctcaacccccagcacctgtgagtgtgaccttgtttggaagcagggtctttgcagatttaattagtcaatttgcggccatggtggactggggtgtctttacaagaagagggcagtgtgggcccagacacagaagatgcaggggacagtgctgtgtgaagacaggggtggt-gaggctggagggatgcgtctgtgagccagggagcatc i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5500340 207 - 5823884 ggagtctcagcccccagcacctgtgagtgggaccttgtttggaagtagggtctttgcagat----ttagtcaatttgaggccatggtggactggggtgtccttacaagaagagggcagtgcggacccagacacagaagatgcaggggacggtgctgtgtgaagacagaagtggt-gaggctggagggatgcgtctgtgagccggggagcgtc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58152920 210 + 159171411 ggagtctcaacctccagcacctgtgagtgtgactttgtttgaaagtagggtctttgcagacttaattagtcaatttgggggcatggtggaccagggtggccttataagaaaagagacgtttggacacggacacagaagatgcag-ggagagtgctgtgtggagacag-aacggtggaggctggagggatgcatctgtaagccagggagcatc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16217745 210 + 16356641 ggagtctcaacctccagcacctgtgagtgtgactgtgtttgaaaatagggtctttgcagatttaattagtcaatttgggggcatggtggaccagcgtggccttataagaaaagagacatttgaacagagacacagaagaagcag-ggagagtgctgtgtgaagacag-agtggtggaggctggagggatgcgtctgtgagccagggagcatc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1083026 208 + 1231380 ggagtctcaacctccagcacctgtgagtgtgaccttgtttgaaagtagggtctttgcagatataattagtcaatttgggggcatggtggaccagggtggccttataagaaaagagacatttggacacggacacagaagatacag-ggagagtgctgtgtgaag--ag-agtggtggaggctggagggatgtgtctgtgagccagggagcatc i cebCap1.NW_016107870v1 C 0 I 37 s aotNan1.NW_018500483v1 2618381 210 + 11732439 ggagtctcaacctccagcacctgtgagtgtgactctgtttgaaagtagggtctttgcagatttaattagtcaatttgggggcacagtggaccagggtggccttataagaaaagagacatttggacacggacacagaagatgcac-ggagagtgctgtgtgaagacag-agtggtggaggctggagggctgcgtctgtgagccagggagcaac i aotNan1.NW_018500483v1 I 141 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e otoGar3.GL873542 159957 0 - 22939663 I a score=269756.000000 s hg38.chr20_KI270870v1_alt 34813 33 + 183433 caggat----------tgccagaaactagaggaggtgaggaac s panTro5.chr20 66365055 33 + 66533130 caggat----------tgccagaaactagacgaggtgaggaac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045000 33 + 62195757 caggat----------tgccagaaactagaggaggtgaggaac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433305 33 - 578057 caggat----------tgccagaaactagaggaggtgaggaag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958185 43 - 110113093 gaggattgccagcaactgccagaaactagaggaggcaaggaag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92686966 43 - 92844088 gaggattgccggcaactgctagaagctggaggaggtgaggaag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96349774 43 + 96509753 gaggattgccggcaactgctagaagctggaggaggtgaggaag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16823388 43 - 16982598 gaggattgccagcaactgctagaagctggaggaggtgaggaag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627294 43 - 3785965 gaggattgccagcaactgctagaagctggaggaggtgaggaag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249153 43 - 90373283 aaggattgccagcaactgccagaagctggaggaggtgaggaag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156004 43 + 156971 aaggattgccagcaactgctagaagctggaggaggtgaggaag i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5500547 43 - 5823884 aaggattgccagcgactgctagaagctggaggaggtgaggagg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153130 41 + 159171411 -agggtt-ccagcaactgccagaagctggaggaggcgaaggag i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16217955 41 + 16356641 -agggttgccagcagctgccag-agctgaaggaggcgagggag i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2618591 42 + 11732439 -agggttgccagcaactgccagaagctggaggaggcgagggag i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e cebCap1.NW_016107870v1 1083234 37 + 1231380 I e otoGar3.GL873542 159957 0 - 22939663 I a score=1570859.000000 s hg38.chr20_KI270870v1_alt 34846 183 + 183433 ggtcatccctggagtcttcggagggaatgcagccctgacaatactggattccagacttccggcctccagaacta--agagaataattttctattgttta----agccagtctgtggtcctttattatgg-agccctaagag-accaTGCAGTGTGCGTGGAAGGGGCTGCTCCAGACAGAGGAAACCACAC s panTro5.chr20 66365088 183 + 66533130 cgtcatccctggagtcttcggagggaatgcagccctgacaatactggattccagacttccggcctccagaacta--agagaataattttctattgttta----agccagtctgtggtcctttattatgg-agccctaagag-accaTGCAGTATGCGTGGAAGGGGCTGCTCCAGACAGAGGAAACCACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045033 183 + 62195757 cgtcatccctggagtcttcggagggaatgcagccctgacaatactggattccagacttctggcctccagaacta--agagaataattttctattgttta----agccagtctgtggtcctttattatgg-agccctaagag-accaTGCAGTATGCGTGGAAGGGGCTGCTCCAGACAGAGGAAACCACAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433338 183 - 578057 ggtcatccctggagtcttcggagggaatgcagccctgacaatactggattccagacttccggactccagaacta--agataataattttctattgttta----agccagtctgtggtcctttattatgg-agccctaagag-accaTGCAGTGTGCGTGGAAGGGGCTGCTCCAGACAGAGGAAACCACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958228 185 - 110113093 ggtcatccctggagtcttcgcagggaatgcagccctgccaatactggattccagacttccggcctccaggactaagagagaataattttctgttgttta----agccagtctgtggtcctttattatgg-agccctaagag-accaTGCAGTATGCGTGGAAGGGGCTGCTCCAGACAGAGGAAACCACAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687009 187 - 92844088 ggtcatctctggagtcttcggagggaatgcagccctaccaatacttgattccagacttctggcctccagagctaagagggaataattttctgttgttta----agccagtctggggtcctttattatggcaaccctaagaGTCCCACGCAGTGTGCATGGAAAGGGTTGCTCCAGACAGAGGAAACCACAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96349817 187 + 96509753 ggtcatctctggagtcttcggagggaatgcagccctaccaatacttgattccagacttctggcctccagagctaagagggaataattttctgttgttta----agccagtctggggtcctttattatggcaaccctaagaGTCCCACGCAGTGTGCATGGAAAGGGTTGCTCCAGACAGAGGAAACCACAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16823431 187 - 16982598 ggtcatctctggagtcttcggagggaatgcagccctaccaatacttgattccagacttctggcctccagaactaagagggaataattttctgttgttta----agccagtctggggtcctttattatggcaaccctaagaGTCCCACGCAGTGTGCATGGAAAGGGTTGCTCCAGACAGAGGAAACCACAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627337 177 - 3785965 ggtcatctctggagtcttcggagggaatgcagccctaccaatacttgattccagacttccggcctccagaactaagagggaataattttctgttgttta----agccagtctggggtcctttattatggca----------tcccATGCAGTGTGCGTGGAAGGGGTTGCTCCAGACAGAGGAAACCACAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249196 187 - 90373283 ggtcatctctggagtcttcggagggaatgcagccctgccaatacttgattccagacttctggcctccagaactaagagggaataattttctgttgttta----agccaggctggggtcctttattatggcaaccctaAGGGTCCCATGCAGTGTGCGTGGAAGGGGTTGCTCCAGACAGAGGAAACCACAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156047 187 + 156971 ggtcatctctggaggcttcggagggaatgcagccccaccaatacttaattccagacttctggcctccagaactaagagggaataattttctgttgttta----agccagtctggggtcctttattatggcaaccctaagagtcccatgcaGTGTGCGTGGAAGGGGTTGCTCCAGACGCAGGAAACCACAC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5500590 182 - 5823884 ggttgtctctggagtcttcggaggcaatgcag-----ccactacttgattccagacttccggcctccagaactaagagggaataattttctgttgttta----agccagtctggggtcctgtattatggcaaccctaagagtcccatgcaGTGTGCATGGAAGGGGTTACTCCAGACAGAGGAAACCACAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153171 189 + 159171411 ggtcatccctggagtcttccgacagagtgcagccctgtcaacacctgcctccagacttccggcctccagaacta-gagagagtgagtttctgttgttcaggccagcccgtctgtggtcccttagtatggcagccccaggagacccatgcaGTGTGTGTGGAAGGAGCGGC-CCAAACAGAGGAAACCACAG i calJac3.chr5 C 0 I 21 s saiBol1.JH378156 16217996 190 + 16356641 ggtcatccctggagtcttcggacagagagcagtcctgtcaacatctgcctccagacttccggcctccagaacta-gagagagtgaatttctgttgttcagaccagccagtctgtcgtcctttagtgtggcagctccaggagacccatgcaGTGTGCATGGAAGGAGCGGCTCCAAACAGAGGAAACCACAG i saiBol1.JH378156 C 0 I 10 s cebCap1.NW_016107870v1 1083271 188 + 1231380 ggtcatccctggagtcttcggacagagagcagccctgtcaacacctgcctccagacttgcggcctccagaactc-gagagagtgaatttctgttgttcaggccagccagtctgtggtcctttagtgtggcagccccaggagacccatgcaGTGTGCGTGGAAGGAGCGGTTCCAAAC--AGGAAACCACAG i cebCap1.NW_016107870v1 I 37 I 40 s aotNan1.NW_018500483v1 2618633 184 + 11732439 gatcatccctggagtcttcggacagagcgcagccctggcaacacctgcctccagacttccggcctccagaact---agagagtgaatttctgttgttcaggccagccagtctgcagtcctttagtatggcggc-ccaggagacccatgcaGTGTGCGTGGAAGGAGCAGCTCCAAACAGAGGAAACCA--- i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e otoGar3.GL873542 159957 0 - 22939663 I a score=160151.000000 s hg38.chr20_KI270870v1_alt 35029 27 + 183433 ACGCAGATGTCCCAGGAATGGGG---------------------------GGTA s panTro5.chr20 66365271 27 + 66533130 ACGCAGATGTCCCAGGAATGGGG---------------------------GGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045216 27 + 62195757 ACGCAGATGTCCCAGGAATGGGG---------------------------GGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433521 27 - 578057 ACGCATATGTCCCAGGAATGGGG---------------------------GGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958413 27 - 110113093 ACGCAGATGTCCCAGGAGTGGGG---------------------------GGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687196 27 - 92844088 AAGCAGGTGTCCCAGGAGTGGGG---------------------------GGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350004 27 + 96509753 AAGCAGGTGTCCCAGGAGTGGGG---------------------------GGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16823618 27 - 16982598 AAGCAGGTGTCCCAGGAGTGGGG---------------------------GGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627514 27 - 3785965 AAGCAGGTGTCCCAGGAGTGGGG---------------------------GGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249383 27 - 90373283 AAGCAGGTGTCCCAGGAGTGGGG---------------------------GGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156234 27 + 156971 AAGCAGGTGTCCCAGGAGTGGGG---------------------------GGTA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5500772 27 - 5823884 AAGCAGGTGTCCCAGGAGTGGGG---------------------------GGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153381 50 + 159171411 GCATGCATGTCCCGGGAGTGGGGAAGAGGCGCTGGGGCACGTCTGAGAGT---- i calJac3.chr5 I 21 C 0 s saiBol1.JH378156 16218196 23 + 16356641 GCGTGCACGTCCCGGGAGTGGGG------------------------------- i saiBol1.JH378156 I 10 C 0 s aotNan1.NW_018500483v1 2618817 16 + 11732439 -------TGTCCCGGGAACGGGA------------------------------- i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e cebCap1.NW_016107870v1 1083459 40 + 1231380 I e otoGar3.GL873542 159957 0 - 22939663 I a score=1543264.000000 s hg38.chr20_KI270870v1_alt 35056 171 + 183433 GGGGAAGGAGGTGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAATGGGAGGCTTCTT--------------TAAAAAG-CCTAATTCTGGAAAAGGTTAAAGCACACATTT-TGAAGACGAA-ACTATGACCCTCAGGCCAGAGGTTTTATTTAACTTGTGTTGGTTTTAACCCCTGG s panTro5.chr20 66365298 171 + 66533130 GGGGAAGGAGGTGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAATGGGAGGCTTCTT--------------TAAAAAG-CCTAATTCTGGAAAAGGTTAAAGCACACATTT-TGAAGACGAA-ACTATGACCCTCAGGCCAGAGGTTTTATTTAACTTGTGTTGGTTTTAACCCCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045243 171 + 62195757 GGGGAAGGAGGTGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAATGGGAGGCTTCTT--------------TAAAAAG-CCTAATTCTGGAAAAGGTTAAAGCACACATTT-TGAAGACGAA-ACTATGACCCTCAGGCCAGAGGTTTTATTTAACTTGTGTTGGTTTTAACCCCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433548 171 - 578057 GGGGAAGGAGGTGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAATGGGAGGCTTCTT--------------TAAAAAG-CCTAATTCTGGAAAAGGTTAAAGCACACATTT-TGAAGATGAA-ACTATGACCCTCATGCCAGAGGTTTTATTTAACTTGTGTTGGTTTTAACCCCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958440 172 - 110113093 GGGGAAGGAGGTGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAATGGGAGGCTTTTT--------------TAAAAAGCCCTAATTCTGGAAAAGGTTAAAGCACACATTT-TGAAGACAAA-ACTATGACCCTCATGCCAGAGGTTTTATTTAACTTGTGTTGGTTTTAACCCCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687223 173 - 92844088 GGGGAAGGAGGGGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAGTGGGAGGCTTTTTA-------------CAAAAGG-CCTAATTCTGGAAAAGGTTAAAGCACACGTTT-TGAAAACAAGTTCCATGACCCTCATGCCAGAGGTTTTATTGAACTTGTGTTGATTTTAACCCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350031 173 + 96509753 GGGGAAGGAGGGGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAGTGGGAGGCTTTTTA-------------CAAAAGG-CCTAATTCTGGAAAAGGTTAAAGCACACGTTT-TGAAAACAAGTTCCATGACCCTCATGCCAGAGGTTTTATTGAACTTGTGTTGATTTTAACCCCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16823645 173 - 16982598 GGGGAAGGAGGGGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAGTGGGAGGCTTTTTA-------------CAAAAGG-CCTAATTCTGGAAAAGGTTAAAGCACACGTTT-TGAAAACAAGTTCCATGACCCTCATGCCAGAGGTTTTATTGAACTTGTGTTGATTTTAACCCCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627541 172 - 3785965 GGGGAAGGAGGGGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAGTGGGAGGCTTTTTA-------------CAAAAGG-CCTAATTCTGGAAAAGGTTAAAGCACACGTTT-TGAAAACAAA-ACTATGACCCTCATGCCAGAGGTTTTATTGAACTTGTGTTGATTTTAACCCCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249410 172 - 90373283 GGGGAACGAGGGGCTGGATCATGGAGAACCTTTGGACTGTTTTCCTAAAGGCAGTGGGAGGCTTTTTA-------------CAAAAGG-CCTAATTCTGGAAAAGGTTAAAGCACATGTTT-TGAAAACAAA-ACTATGACCCTCACGCCAGAGGTTTTATTGAACTTGTGTTGATTTTAACCTCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156261 172 + 156971 GGGGAAGGAGGGGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAGTGGAAGGCTTTTTA-------------CAAAAGG-CCTAATTCTGGAAGAGGTTAAAGCACACGTTT-TGAAAACAAA-ACTATGACCCTCATGCCAGAGGTTTTATTGAACTTGTGTTGATTTTAACCCCTGG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5500799 171 - 5823884 GGGGAAGGAGGGGCTGGGTCATGGAGAACCTTTGAACTGTTTTCCTAAAGGCAGTGGGAGGCTTTTTA-------------CAAAAGG-CCTAATTCTGGAAAAGGTTAAAGCACACATTT-TGAAAACAAA-ACTATGACCCTCATGCCAGAGGTTTTATTGAACTTGTGTTGATTTTAACCCC-GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153431 180 + 159171411 GGGGAAGGAGGCGCTGGGGCACCGAGAGCCTTTGAACTGTTTTCCTAAAGGAAGGGGGAGGCTTTTTTTTTTTTTTT------AAACC-CCTAATTCTGGAAAAGGTTAAAGCACACTTTTCTCAAGACAGA-ATTATGACCCTCATGCCAGAGGTTTTATTTAACTTATGTTGGTTTTAAACCCTCG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16218219 177 + 16356641 -----AGGAGGCGCTGGGGCGCCGAGAGCCTTTGAATGGTTTTCCTAAAGGAAGGGGGAGGCTTTTTTTTTTTTTTT----TAAAAGC-CCTAATCCTGGAAAAGGTTAAAGCACACTTTTTTGAAGACAGA-ATTGTGACCCTCATGCCAGAGGTTTTATTTAACTTATGTTGGTTTTAAGCCCTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1083499 186 + 1231380 GGGGAAGGAGGCGCTGGGGCACCGAGAGCCTTTGAATTGTTTTCCTAAAGGAAGGGGGAGGCttttttttttttttttttttttAAAC-CCTAATCCTGGAAAAGTTTAAAGCACACTTTTTTGAAGACAGA-ATTGTGACCCTCATGCCAGAGGTTTTATTTAACTTATGTTGATTTTAAACCCTAG i cebCap1.NW_016107870v1 I 40 C 0 s aotNan1.NW_018500483v1 2618833 175 + 11732439 ----AAGGAGGCGCCGGGGCACCGAGAGCCTTTGAACTGTTTTCCTAAAGGCAGGAGGAGGCTTTTTTTTTTTTTT-------AAAGC-CCTAATCCTGGAAAAGGTTAAAGCACACTTTTTTGAAGACAGA-ATTATGACCCTCATGCCAGAGGTTTTATTTAACTTACGTTGGTTTTAAACCCTGG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 187285 2633 - 397369 I e otoGar3.GL873542 159957 0 - 22939663 I a score=1099389.000000 s hg38.chr20_KI270870v1_alt 35227 109 + 183433 GCCTGAGAACAGAGA-------ACAGGGTGAGTGTGACAG---AGGCATGCCCGCTTCTGGGGAGGCCAGT-GGGGCCTCTGCGCCTCCTGGCAGGGGTCACTCAGGAAGAACAAGAGGT s panTro5.chr20 66365469 109 + 66533130 GCCTGAGAACAGAGA-------ACAGGGTGAGTGTGACAG---AGGCATGCCTGCTTCTGGGGAGGCCAGT-GGGGCCTCTGCGCCTCCTGGCAGGGGTCACTCAGGAAGAACAAGAGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045414 109 + 62195757 GCCTGAGAACAGAGA-------ACAGGGTGAGTGTGACAG---AGGCATGCCTGCTTCTGGGGAGGCCACT-GGGGCCTCTGCGCCTCCTGGCAGGGGTCACTCAGGAAGAACAAGAGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433719 109 - 578057 GCCTGAGAACAGAGA-------ACAGGGTGAGTGTGACAG---AGGCATGCCCGCTTCTGGGGAGGCCAGT-GGGGCCTCTGCGCCTCCTGGCAGGGGTCACTCAGGTAGAACAAGAGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958612 109 - 110113093 GCCTGAGAACGGAGA-------ACAGGGCGAGTGTGACAG---AGGCATGCCCGCTGCTGGGGAGGCCAGT-GGGGCCTCTGCGCCTCCTGGCAGGGGTCACTCAGGAAGAACAAGAGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687396 109 - 92844088 GCCTGAGAACAGAGA-------ACCGGGTGAGTGTGACAG---AGGCATGCCCACTTCTGGGGAGGCCGGT-GGGGCCTCTGTGCCTCCTGTCAGGGGTCGCTCAGGAAGAACAAGAGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350204 109 + 96509753 GCCTGAGAACAGAGA-------ACCGGGTGAGTGTGACAG---AGGCATGCCCACTTCTGGGGAGGCCAGT-GGGGCCTCTGTGCCTCCTGTCAGGGGTCGCTCAGGAAGAACAAGAGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16823818 109 - 16982598 GCCTGAGAACAGAGA-------ACCGGGTGAGTGTGACAG---AGGCATGCCCACTTCTGGGGAGGCCAGT-GGGGCCTCTGTGCCTCCTGTCAGGGGTCGCTCAGGAAGAACAAGAGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627713 109 - 3785965 GCCTGAGAACAGAGA-------ACCGGGTGAGTGTGACAG---AGGCGTGCCCACTTCTGGGGAGGCCAGT-GGGGCCTCTGCGCCTCCTGGCAGGGGTCGCTCAGGAAGAACAAGAGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249582 109 - 90373283 GCCTGAGAACAGAGA-------ACCGGGTGAGTGTGACAG---AGGCATGCCCACTTCTGGGGAGGCCAGT-GGGGCCTCTGCACCTCCTGGCAGGGGTCGCTCAGGAAGAACAAGAGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156433 109 + 156971 GCCTGAGAACAGAGA-------ACCGGGTGAGTGTGACAG---AGGCGTGCCCACTTCTGGGGAGGCCAGT-GGGGCCTCTGCGCCTCCTGGCAGGGGTCGCTCAGGAAGAACAAGAGGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5500970 109 - 5823884 TCCTGAGAACAGAGA-------ACCGGGTGCGTGTGACAG---AGGCATGCCCACTTCTGGGGAGGACAGT-GGGGCCTCTGCGCCTCCTGGCAGGGGTCGCTCAGGAGGAACAAGAGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153611 110 + 159171411 GCCTGAGAACAGAGA-------ACAGAGTGAGCGTGGCAG---AGGCATGCCCTCTTCTGGGGATACCAGTGGGGGCCTCTGGGCCTCCTGGCAGGGGTCACTTGGGAAGAACAAGAGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16218396 109 + 16356641 GTCTGAGAACAGAGA-------ACAGCGTGAGCATGACAG---AGGCATGCCCTCTTCTGGTGATACCAGT-GGGGCCTCTGGGCCTCCTGGCTGGGGTCACGTGGGAAGAACAAGAGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1083685 109 + 1231380 GCCTGAGAACAGAGA-------ACAGCGTGAGCGTGACAG---AGGCATGCCCTCTTCTGGGGATACCAGT-GGGGCGTCTGGGCCTCCTGGCACGGGTCACTTGGGAAGAACATGAGGT i cebCap1.NW_016107870v1 C 0 I 638 s aotNan1.NW_018500483v1 2619008 116 + 11732439 GCCTGAGAACAGAGAACAGAGTACAGAGTGGGCGAGACAG---AGGTATGCCCTCTTCTGGGGATACCAGT-GGGGCCTCTGGGCCTCCTGGCAGGGGTCACTAGGGAAGAACAAGAGGT i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 189918 106 - 397369 GCCCGAGCCCAAGAA-------AGAGGGTCTGTGCAACCGGGCAGGACTGCTGGCCTC-AGGGAGCCGGGT-GG---CTCTGGGCCTC--AGCAGAGGTCCGCCAGGGATGGAAATGGCT i dasNov3.JH569290 I 2633 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e otoGar3.GL873542 159957 0 - 22939663 I a score=463628.000000 s hg38.chr20_KI270870v1_alt 35336 59 + 183433 ----CGAGTGGAAGACTATGCTGGATGTTAAAGGTGGAATTTTGGTGCATTTGTCCTGGACCA s panTro5.chr20 66365578 59 + 66533130 ----CGAGTGGAAGACTATGCTGGATGTTAAAGGTGGAATTTTGGTGCGTTTGTCCTGGACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045523 59 + 62195757 ----CGAGTGGAAGACTATGCTGGATGTTAAAGGTGGAATTTTGGTGCGTTTGTCCTGGACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433828 59 - 578057 ----CAAGTGGAAGACTATGCTGGATGTTAAAGGTGGAATTTTGGTGTGTTTGTCCTGGACCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958721 59 - 110113093 ----CGTGTGGAAGACTATGCTGGATGTTAAAGGTGGAATTTTGGTGCGTTTGTCCTGGACCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687505 59 - 92844088 ----CGTGTGGAAGACGATGCTGGATGGTAAAGGTGGAGTTTTGGTGCGTTTGTCCTGGACCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350313 59 + 96509753 ----CGTGTGGAAGACGATGCTGGATGGTAAAGGTGGAGTTTTGGTGCGTTTGTCCTGGACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16823927 59 - 16982598 ----CGTGTGGAAGACGATGCTGGATGGTAAAGGTGGAGTTTTGGTGCGTTTGTCCTGGACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627822 59 - 3785965 ----CGTGTGGAAGACGATGCTGGATGGTAAAGGTGGAGTTTTGGTGCGTTTGTCCTGGACCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249691 59 - 90373283 ----CGTGTGGAAGACGATGCTGGATGGTAAAGGTGGAGTTTTGGTGCGTTTGTCCTGGACCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156542 59 + 156971 ----CGTGTGGAAGACGATGCTGGATGGTAAAGGTGGAGTTTTGGTGCATTTGTCCTGGACCA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501079 59 - 5823884 ----CGTGTGGGAGACTATGCTGGATGGTAAAGGTGGAATTTTGGTGCATTTGTCCTGGACCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153721 56 + 159171411 ----TGTGTCAAAGGCCGTGCCGGATG-TGAA-GTGGAA-TTTGGTGGGTTTGTCCTGGACCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16218505 56 + 16356641 ----TGTGTCAAAGGCTGTGCCGGATGTTGAA-GTGGAA-TTTGGTGGTTTTGTCCT-GACCA i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2619124 57 + 11732439 ----TGTGTCAAAGGCTGTGCCGGATGTTGAA-GTGGAA-TTTGGTGGGTTTGTCCTGGACCA i aotNan1.NW_018500483v1 C 0 I 668 s dasNov3.JH569290 190024 61 - 397369 TGTCTGGGTGTCAGGCT-TGCTGAGTACCAAG-GTGGAGTTTTAGCACATTTGTCCTGGTACT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e otoGar3.GL873542 159957 0 - 22939663 I a score=372195.000000 s hg38.chr20_KI270870v1_alt 35395 57 + 183433 CTGACGCTTTCTTGTTCAG--CACAAGGGCGATGGCAATGGCCACT----------GGCAATCCTGGGC----- s panTro5.chr20 66365637 57 + 66533130 CTGACACTTTCTTGTTCAG--CACAAGGGCGATGGCAATGGCCACT----------GGCAATCCTGGGC----- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045582 57 + 62195757 CTGATGCTTTCTTGTTCAG--CACAAGGGCGATGGCAATGGCCACT----------GGCAATCCTGGGC----- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433887 57 - 578057 CTGACACTTTCTTGTTCAG--CACAAGGGCGATGGCAATGGCCACT----------GGCAATCCTGGGC----- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958780 57 - 110113093 CTGATGCTTTCTTGTTCAG--CACAAGGGCGATGGCAATGGCCACT----------GGCAATCCTGGAC----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687564 57 - 92844088 CTGACACGTTCTTGTTCAG--CACAAGGGCAATGGCAATGGCCACT----------GGTAATCCTGGGC----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350372 57 + 96509753 CTGACACGTTCTTGTTCAG--CACAAGGGCAATGGCAATGGCCACT----------GGTAATCCTGGGC----- i macFas5.chr10 C 0 I 264 s macNem1.NW_012014244v1 16823986 57 - 16982598 CTGACACGTTCTTGTTCAG--CACAAGGGCAATGGCAATGGCCACT----------GGTAATCCTGGGC----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627881 57 - 3785965 CTGACATGTTCTTGTTCAG--CACAAGGGCAATGGCAATGGCCACT----------GGTAATCCTGGGC----- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249750 57 - 90373283 CTGACACGTTCTTGTTCAG--CACAAGGGCAATGGCAATGGCCACT----------GGTAATCCTGGGC----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156601 57 + 156971 CTGACACGTTCTTGTTCAG--CACAAGGGCAATGGCAGTGGCCACT----------GGTAATCCTGGGC----- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501138 57 - 5823884 CTGACACGTTCTTGTTCAG--CACTAGGGCAATGGCAATGGCCACT----------GGTAATCCTGGGC----- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153777 46 + 159171411 -----------TTGTTCGG-CCACAAGGGCAATGGAAAAGGCCACT----------GTCAGTCCTGGC------ i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16218561 46 + 16356641 -----------TTGTTCGG-CCACAAGGGCGATGGAAAAGGTCACT----------GTCAGTCCTGGC------ i saiBol1.JH378156 C 0 C 0 s dasNov3.JH569290 190085 70 - 397369 CTGGCACTTCATCCTTCAGTCCATAATAGCAGTG----TAGACACTCTGCCGTGTAGACACTCCACTGTGACGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=78973.000000 s hg38.chr20_KI270870v1_alt 35452 11 + 183433 TCCAGGTGTGT-- s panTro5.chr20 66365694 11 + 66533130 TCCAGGTGTGT-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045639 11 + 62195757 TCCAGGTGTGT-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433944 11 - 578057 TCCAGGTGTGT-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958837 11 - 110113093 TCCAGGTGTGT-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687621 11 - 92844088 TCCAGGCGTGT-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350693 11 + 96509753 TCCAGGCGTGT-- i macFas5.chr10 I 264 C 0 s macNem1.NW_012014244v1 16824043 11 - 16982598 TCCAGGCGTGT-- i macNem1.NW_012014244v1 C 0 I 105 s cerAty1.NW_012001373v1 3627938 11 - 3785965 TCCAGGCGTGC-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249807 11 - 90373283 TCCAGGCGTGT-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156658 11 + 156971 TCCAGGCATGC-- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501195 11 - 5823884 TCCAGgcgtgt-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153823 11 + 159171411 TTCAGGCGTAT-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16218607 11 + 16356641 TCCAGGCATGT-- i saiBol1.JH378156 C 0 C 0 s dasNov3.JH569290 190155 12 - 397369 -TCTGCCGTGTAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=5684.000000 s hg38.chr20_KI270870v1_alt 35463 2 + 183433 GC s panTro5.chr20 66365705 2 + 66533130 GC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045650 2 + 62195757 GC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433955 2 - 578057 GC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958848 2 - 110113093 GC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687632 2 - 92844088 TC i rheMac8.chr10 C 0 I 192 s macFas5.chr10 96350704 2 + 96509753 TC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3627949 2 - 3785965 TC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249818 2 - 90373283 TC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156669 2 + 156971 TC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501206 2 - 5823884 gc i colAng1.NW_012114444v1 C 0 I 2 s calJac3.chr5 58153834 2 + 159171411 GT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16218618 2 + 16356641 GC i saiBol1.JH378156 C 0 C 0 s dasNov3.JH569290 190167 2 - 397369 AC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e macNem1.NW_012014244v1 16824054 105 - 16982598 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=3045.000000 s hg38.chr20_KI270870v1_alt 35465 2 + 183433 AT s panTro5.chr20 66365707 2 + 66533130 AT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045652 2 + 62195757 AT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433957 2 - 578057 AT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958850 2 - 110113093 AT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96350706 2 + 96509753 GT i macFas5.chr10 C 0 C 0 s colAng1.NW_012114444v1 5501210 2 - 5823884 gt i colAng1.NW_012114444v1 I 2 C 0 s calJac3.chr5 58153836 2 + 159171411 GT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16218620 2 + 16356641 CT i saiBol1.JH378156 C 0 C 0 s dasNov3.JH569290 190169 2 - 397369 AC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3627951 0 - 3785965 C e chlSab2.chr2 90249820 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 156671 0 + 156971 C e macNem1.NW_012014244v1 16824054 105 - 16982598 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e rheMac8.chr10 92687634 192 - 92844088 I e otoGar3.GL873542 159957 0 - 22939663 I a score=24313.000000 s hg38.chr20_KI270870v1_alt 35467 4 + 183433 GTGT--- s panTro5.chr20 66365709 4 + 66533130 GTGT--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045654 4 + 62195757 GTGT--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433959 4 - 578057 GTGT--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958852 4 - 110113093 GTGT--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687826 4 - 92844088 GTGT--- i rheMac8.chr10 I 192 C 0 s macFas5.chr10 96350708 2 + 96509753 --GT--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16824159 4 - 16982598 GTGT--- i macNem1.NW_012014244v1 I 105 C 0 s cerAty1.NW_012001373v1 3627951 4 - 3785965 GTGT--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249820 4 - 90373283 GTGT--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156671 4 + 156971 GTGT--- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501212 4 - 5823884 gtgt--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153838 4 + 159171411 GTGT--- i calJac3.chr5 C 0 I 4 s saiBol1.JH378156 16218622 4 + 16356641 GTGT--- i saiBol1.JH378156 C 0 I 513 s dasNov3.JH569290 190171 4 - 397369 ---TCAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=118961.000000 s hg38.chr20_KI270870v1_alt 35471 21 + 183433 GTGCGTAGAGGCA----CTGGAGTA s panTro5.chr20 66365713 21 + 66533130 GTGCGTAGAGGCA----TTGGAGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045658 21 + 62195757 GTGCGTAGAGGCA----CTGGAGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433963 21 - 578057 GTGCGTAGAGGCA----CTGGAGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958856 21 - 110113093 GTGCGTAGAGGCA----CTGGAGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687830 21 - 92844088 GTGCCTAGAGGCA----CTGGAGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350710 21 + 96509753 GTGTGTAGAGGCA----CTGGAGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16824163 21 - 16982598 GTGTGTAGAGGTA----CTGGAGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627955 21 - 3785965 GTGTGTACAGGCA----CTGGAGAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249824 21 - 90373283 GTGCCTAGAGGCA----CTGGAGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156675 21 + 156971 GTGCCTGGAGGCA----CTGGAGAA i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501216 21 - 5823884 gtgtgtagaggca----ctgcagta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153846 25 + 159171411 GTGTGTGGCAGCAGGACCTGGAGTA i calJac3.chr5 I 4 I 104 s dasNov3.JH569290 190175 20 - 397369 CTGTGTAGACACA----TTGAGGG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=32196.000000 s hg38.chr20_KI270870v1_alt 35492 5 + 183433 TCCAG s panTro5.chr20 66365734 5 + 66533130 TCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045679 5 + 62195757 TCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433984 5 - 578057 TCCAG i gorGor5.CYUI01015848v1 C 0 I 72 s nomLeu3.chr13 109958877 5 - 110113093 TCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687851 5 - 92844088 TCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350731 5 + 96509753 TCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16824184 5 - 16982598 TCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627976 5 - 3785965 TCCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249845 5 - 90373283 TCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156696 5 + 156971 TCCAG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501237 5 - 5823884 tccag i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190195 5 - 397369 TGGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=32898.000000 s hg38.chr20_KI270870v1_alt 35497 6 + 183433 GCATGT s panTro5.chr20 66365739 6 + 66533130 GCATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045684 6 + 62195757 GCATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434061 6 - 578057 GCGTGT i gorGor5.CYUI01015848v1 I 72 C 0 s nomLeu3.chr13 109958882 6 - 110113093 GAGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687856 6 - 92844088 GCGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350736 6 + 96509753 GCGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16824189 6 - 16982598 GCGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3627981 6 - 3785965 GCGTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249850 6 - 90373283 GCgtgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156701 6 + 156971 GCGTGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501242 6 - 5823884 gcgtgt i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190200 6 - 397369 GCATCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=7395.000000 s hg38.chr20_KI270870v1_alt 35503 2 + 183433 TC s panTro5.chr20 66365745 2 + 66533130 TC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045690 2 + 62195757 TC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434067 2 - 578057 TC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958888 2 - 110113093 GC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687862 2 - 92844088 TC i rheMac8.chr10 C 0 I 36 s macFas5.chr10 96350742 2 + 96509753 TC i macFas5.chr10 C 0 I 74 s macNem1.NW_012014244v1 16824195 2 - 16982598 TC i macNem1.NW_012014244v1 C 0 I 76 s cerAty1.NW_012001373v1 3627987 2 - 3785965 TC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101369v1 156707 2 + 156971 TC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501248 2 - 5823884 gc i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190206 2 - 397369 CC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e chlSab2.chr2 90249856 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=139051.000000 s hg38.chr20_KI270870v1_alt 35505 48 + 183433 AT------------------------------------GTGTGTGAGTAGAGGCACTGGAGTACACTGGAGTAT------CCAGGCGTGT---- s panTro5.chr20 66365747 38 + 66533130 AT------------------------------------GTGTGTGAGTAGAGG----------CACTGGAGTAT------CCAGGCGTGT---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045692 38 + 62195757 AT------------------------------------GTGTGTGAGTAGAGG----------CACTGGAGTAT------CCAGGCGTGT---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434069 38 - 578057 AT------------------------------------GTGTGTGCGTAGAGG----------CACTGGAGTAT------CCAGgcgtgt---- i gorGor5.CYUI01015848v1 C 0 T 118 s nomLeu3.chr13 109958890 74 - 110113093 ATGTGTGCGTAGAGCCACTGGAGTATCCAGGCATGTGCGTGTGTGCGTAGAGC----------CACTGGAGTAT------CCAGGCGTGT---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687900 38 - 92844088 ------------------------------------TCGTGTGTGCCTAGAGG----------CACTGGAGAAT------CCAGGCGTGT---- i rheMac8.chr10 I 36 C 0 s macFas5.chr10 96350818 38 + 96509753 ------------------------------------TCGTGTGTGCCTAGAGG----------CACTGGAGAAT------CCAGGCGTGT---- i macFas5.chr10 I 74 C 0 s macNem1.NW_012014244v1 16824273 38 - 16982598 ------------------------------------CCGTGTGTGCCTAGAGG----------CACTGGAGAAT------CCAGGCGTGT---- i macNem1.NW_012014244v1 I 76 C 0 s cerAty1.NW_012001373v1 3627989 36 - 3785965 --------------------------------------GTGTGTGCCTGGAGG----------CACTGGAGAAT------CCAGGCGTGT---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249856 38 - 90373283 ------------------------------------gtgtgtgtgtgtagagg----------cactgcagtat------ccaggtgtgt---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156709 35 + 156971 --------------------------------------GTGTGTGTGTACAGG----------CACTGGAGAAT------CCAGGCGTG----- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501250 38 - 5823884 ------------------------------------gtgtgtgtgcgtAGAGG----------TACTGGAGTAT------CCAGGCGTGT---- i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190208 40 - 397369 --------------------------------------------ATATAGACG----------CTCTGCTGTGTAGATGCTCCGCCATGTAGAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=-2393.000000 s hg38.chr20_KI270870v1_alt 35553 2 + 183433 G--C s panTro5.chr20 66365785 2 + 66533130 G--C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045730 2 + 62195757 G--C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433989 2 - 578057 G--C i gorGor5.CYUI01015848v1 T 118 C 0 s nomLeu3.chr13 109958964 2 - 110113093 G--C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687938 2 - 92844088 C--C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350856 2 + 96509753 T--C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16824311 2 - 16982598 T--C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628025 2 - 3785965 T--C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249894 4 - 90373283 gcct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156744 1 + 156971 ---T i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501288 2 - 5823884 G--T i colAng1.NW_012114444v1 C 0 I 315 s dasNov3.JH569290 190248 2 - 397369 G--C i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=120399.000000 s hg38.chr20_KI270870v1_alt 35555 24 + 183433 GTGTGTGAGTAGAGGCACTGGAGT s panTro5.chr20 66365787 24 + 66533130 GTGTGTGAGTAGAGGCACTGGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045732 24 + 62195757 GTGTGTGAGTAGAGGCACTGGAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 433991 24 - 578057 GTGTGTGAGTAGACACACTGGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109958966 24 - 110113093 GTGTGTGCGTAGAGGCACTGGAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687940 24 - 92844088 GTGTGTGCCTAGAGGCACTGGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350858 24 + 96509753 GTGTGTGTGTAGAGGTACTGGAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16824313 24 - 16982598 GTGTGTGTGTACAGGCACTGGAGT i macNem1.NW_012014244v1 C 0 I 872 s cerAty1.NW_012001373v1 3628027 24 - 3785965 GTGTGTGTGTACAGGCACTGGAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249898 24 - 90373283 gtgtgtgtgtAGAGGTACTGGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156745 24 + 156971 GTGTGTGTGTAGAGGTACTGGAGT i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501605 24 - 5823884 GTGTGTGCGTAGAGGTACTATAGT i colAng1.NW_012114444v1 I 315 C 0 s dasNov3.JH569290 190250 23 - 397369 ACCACTGTGTAGAAGCACAGAAG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=71799.000000 s hg38.chr20_KI270870v1_alt 35579 14 + 183433 ATCCAGGCGTGTGC s panTro5.chr20 66365811 14 + 66533130 ATCCAGGCGTGTTC i panTro5.chr20 C 0 I 2 s panPan2.chr20 62045756 14 + 62195757 ATCCAGGCGTGTTC i panPan2.chr20 C 0 I 2 s gorGor5.CYUI01015848v1 434015 14 - 578057 ATCCAGGCATGTTC i gorGor5.CYUI01015848v1 C 0 I 122 s nomLeu3.chr13 109958990 14 - 110113093 ATCCAGGCGTGTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687964 14 - 92844088 ATCCAGGCGTGTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350882 14 + 96509753 ATCCAGGCGTGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825209 14 - 16982598 ATCCAGGCGTGTTC i macNem1.NW_012014244v1 I 872 C 0 s cerAty1.NW_012001373v1 3628051 12 - 3785965 ATCCTGGCGTGT-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249922 14 - 90373283 ATCCAGGCATGTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156769 14 + 156971 ATCCAGGCGTGTTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501629 14 - 5823884 ATCCAGGCGTGTGC i colAng1.NW_012114444v1 C 0 I 2 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190273 0 - 397369 C e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=177866.000000 s hg38.chr20_KI270870v1_alt 35593 36 + 183433 GTGTGTGAGTAGAGGCACTGGAGTATCTAGTCGTGT s panTro5.chr20 66365827 36 + 66533130 GTGTGTGAGTAGAGGCACTGGAGTATCTAGTCGTGT i panTro5.chr20 I 2 C 0 s panPan2.chr20 62045772 36 + 62195757 GTGTGTGAGTAGAGGCACTGGAGTATCTAGTCGTGT i panPan2.chr20 I 2 C 0 s gorGor5.CYUI01015848v1 434151 36 - 578057 gtgtgtgcgtAGAGGCACTGGAGTATCCAGGCGTGT i gorGor5.CYUI01015848v1 I 122 T 158 s nomLeu3.chr13 109959004 36 - 110113093 GTGTGTGCGTAGAGGCACTGGAGTATCCAGGCGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92687978 36 - 92844088 GTGTGTGTGTAGAGGTACTGGAGAATCCAGGCGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350896 36 + 96509753 GTGTGTGTGTAGAGGCACTGGAGAATCCAGGCGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825223 36 - 16982598 GTGTGTGTGTACAGGCACTGGAGAATCCAGGCGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628063 36 - 3785965 GTGTGTGGATAGAGGCACTGGAGAATCCAGGCGTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249936 35 - 90373283 GTGTGTGCCTAGAGGCACCAGAGAATCCAGGCGTG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156783 36 + 156971 GTGTGTGCCTAGAGGCACTGGAGAATCCAGGCGTGC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501645 36 - 5823884 GTGTGTGTGTAGAGGCACTGCAGTATCCAGGCGTGT i colAng1.NW_012114444v1 I 2 C 0 s dasNov3.JH569290 190273 16 - 397369 --------GTGGAGGCACTGCCGT------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=121624.000000 s hg38.chr20_KI270870v1_alt 35629 28 + 183433 GTGTGTGTGAGTAGAGGCACTGGAGTAT------- s panTro5.chr20 66365863 28 + 66533130 GCGTGTGTGAGTAGAGGTGCTGGAGTAT------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045808 28 + 62195757 GTGTATGTGAGTAGAGGCGCTGGAGTAT------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434029 28 - 578057 ATGTGTGTGCATAGAGGCACTGGAGTAT------- i gorGor5.CYUI01015848v1 T 158 C 0 s nomLeu3.chr13 109959040 28 - 110113093 GCATGTGTGCGTAGAGCCACTGGAGTAT------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688014 28 - 92844088 CCGTGTGTGTGTAGAGGCACTGGAGAAT------- i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96350932 28 + 96509753 TCGTGTGTGGATAGAGGCACTGGAGAAT------- i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16825259 28 - 16982598 TCGTGTGTGTGTAGAGGTACTGGAGTAT------- i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3628099 28 - 3785965 TCGTGTGTGTGTACAGGCACTGGAGAAT------- i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90249971 27 - 90373283 -TGTGTATGCATAGAGGCACTGGAGTAT------- i chlSab2.chr2 C 0 T 142 s manLeu1.NW_012101369v1 156819 28 + 156971 TCGTGTGTGCCTGGAGGCACTGGAGAAT------- i manLeu1.NW_012101369v1 C 0 I 1 s colAng1.NW_012114444v1 5501681 28 - 5823884 GCGTGTGCGTGTAGAGGTACTGGAGTAT------- i colAng1.NW_012114444v1 C 0 I 1 s dasNov3.JH569290 190289 25 - 397369 ----------GTAGATGCACTGCTGTGTAGGTGCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=-7090.000000 s hg38.chr20_KI270870v1_alt 35657 4 + 183433 --CCA-G s panTro5.chr20 66365891 5 + 66533130 --CCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045836 5 + 62195757 --CCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434057 5 - 578057 --CCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959068 4 - 110113093 --CCAG- i nomLeu3.chr13 C 0 I 344 s rheMac8.chr10 92688043 4 - 92844088 ---CAGG i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96350961 4 + 96509753 ---CAGG i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16825288 4 - 16982598 ---CAGG i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3628128 4 - 3785965 ---CAGG i cerAty1.NW_012001373v1 I 1 C 0 s manLeu1.NW_012101369v1 156848 4 + 156971 ---CAGG i manLeu1.NW_012101369v1 I 1 C 0 s colAng1.NW_012114444v1 5501710 4 - 5823884 ---CAGG i colAng1.NW_012114444v1 I 1 C 0 s dasNov3.JH569290 190314 4 - 397369 CTGC--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e chlSab2.chr2 90249998 142 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=5500.000000 s hg38.chr20_KI270870v1_alt 35661 1 + 183433 C s panTro5.chr20 66365896 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045841 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434062 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92688047 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350965 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825292 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628132 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101369v1 156852 1 + 156971 C i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501714 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190318 1 - 397369 C i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e chlSab2.chr2 90249998 142 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e nomLeu3.chr13 109959072 344 - 110113093 I e otoGar3.GL873542 159957 0 - 22939663 I a score=21730.000000 s hg38.chr20_KI270870v1_alt 35662 6 + 183433 GTGTTC s panTro5.chr20 66365897 6 + 66533130 GTGTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045842 6 + 62195757 GTGTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434063 6 - 578057 GTGTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959416 6 - 110113093 GTGTGC i nomLeu3.chr13 I 344 C 0 s rheMac8.chr10 92688048 6 - 92844088 GTGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350966 6 + 96509753 GTGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825293 6 - 16982598 GTGTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628133 6 - 3785965 GTGTTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101369v1 156853 5 + 156971 GTGTT- i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501715 6 - 5823884 GTGTGT i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190319 6 - 397369 GTGTAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e chlSab2.chr2 90249998 142 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=2184.000000 s hg38.chr20_KI270870v1_alt 35668 2 + 183433 AT s panTro5.chr20 66365903 2 + 66533130 AT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045848 2 + 62195757 AT i panPan2.chr20 C 0 T 78 s gorGor5.CYUI01015848v1 434069 2 - 578057 AT i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90249856 2 - 90373283 gt i chlSab2.chr2 T 142 C 0 s manLeu1.NW_012101369v1 156858 1 + 156971 -T i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501721 2 - 5823884 GT i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190325 2 - 397369 AC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3628139 0 - 3785965 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e macNem1.NW_012014244v1 16825299 0 - 16982598 C e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e nomLeu3.chr13 109959422 0 - 110113093 C e rheMac8.chr10 92688054 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96350972 0 + 96509753 C a score=187558.000000 s hg38.chr20_KI270870v1_alt 35670 38 + 183433 -GTGTGTGAGTAGAGGCACTGGAGTATCTA------GTCGTGTGC s panTro5.chr20 66365905 38 + 66533130 -GTGTGTGAGTAGAGGCACTGGAGTATCTA------GTCGTGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045772 38 + 62195757 -GTGTGTGAGTAGAGGCACTGGAGTATCTA------GTCGTGTGT i panPan2.chr20 T 78 I 40 s gorGor5.CYUI01015848v1 434071 38 - 578057 -GTGTGTGCGTAGAGGCACTGGAGTATCCA------Ggcgtgtgc i gorGor5.CYUI01015848v1 C 0 I 2 s nomLeu3.chr13 109959422 38 - 110113093 -GTGTGTGAGTAGAGGCACTGGAGTATCCA------GGCGTGTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688054 38 - 92844088 -GTGTGTGGATAGAGGCACTGGAGAATCCA------GCCGTGTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96350972 38 + 96509753 -GTGTGTGTGTAGAGGTACTGGAGAATCCA------GGCGTGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825299 38 - 16982598 -GTGTGTGCCTAGAGGCACTGGAGAATCCA------GGCGTGTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628139 38 - 3785965 -GTGTGTGCCTAGAGGCACTGGAGAATCCA------GGCGTGTTC i cerAty1.NW_012001373v1 C 0 I 2 s chlSab2.chr2 90249858 38 - 90373283 -gtgtgtgtgtagaggcactgcagtatcca------ggtgtgtgc i chlSab2.chr2 C 0 I 2 s manLeu1.NW_012101369v1 156859 38 + 156971 -GTGTGTGTGTACAGGCACTGGAGAATCCA------GGCGTGTTC i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501723 38 - 5823884 -GTGTGTGCGTAGAGGTACTGGAGTATCCA------GGTGTGTGT i colAng1.NW_012114444v1 C 0 I 2 s dasNov3.JH569290 190327 45 - 397369 ACACTGAGGGTGGAGGCACCGCTGTGTACATGCTCTGCCGCGTAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=177560.000000 s hg38.chr20_KI270870v1_alt 35708 38 + 183433 GTGTG------TGAGTAGAGGCACTGGAGTATCCAGGCG----------------------------------------TGTTC s panTro5.chr20 66365943 78 + 66533130 GTGTG------TGAGTAGAGGCGCTGGAGTATCCAGGCGTGTTCATGTGTGTGAGTAGACACACTGGAGTATCCAGGCATGTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045850 38 + 62195757 GTGTG------TGAGTAGAGGCACTGGAGTATCCAGGCA----------------------------------------TGTTC i panPan2.chr20 I 40 C 0 s gorGor5.CYUI01015848v1 434111 38 - 578057 gtgtg------tgcgtagaggcactggagtatccaggcg----------------------------------------tgtgc i gorGor5.CYUI01015848v1 I 2 C 0 s nomLeu3.chr13 109959460 38 - 110113093 GTGTG------TGAGTAGAGGCACTGGAGTATCCAGGCG----------------------------------------TGTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688092 38 - 92844088 GTGTG------TGGATAGAGGCACTGGAGTATCCAGGCG----------------------------------------TGTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351010 38 + 96509753 GTGTG------TGTGTAGAGGTACTGGAGAATCCAGGCG----------------------------------------TGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825337 38 - 16982598 GTGTG------TGCCTAGAGGTACTGGAGAATCCAGGCG----------------------------------------TGTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628179 38 - 3785965 GTGTG------TGTGTAGAGGCACTGCAGTATCCAGGCG----------------------------------------TGTTC i cerAty1.NW_012001373v1 I 2 I 148 s chlSab2.chr2 90249898 38 - 90373283 gtgtg------tgtgtAGAGGTACTGGAGTATCCAGGCA----------------------------------------TGTTC i chlSab2.chr2 I 2 C 0 s manLeu1.NW_012101369v1 156897 38 + 156971 GTGTG------TGTGTAGAGGCACTGGAGAATCCAGGCG----------------------------------------TGTTG i manLeu1.NW_012101369v1 C 0 C 0 s colAng1.NW_012114444v1 5501763 38 - 5823884 GTGTG------TGCGTAGAGGTACTATAGTATCCAGGCG----------------------------------------TGTGC i colAng1.NW_012114444v1 I 2 C 0 s dasNov3.JH569290 190372 42 - 397369 --ATGCTCTGCCGCGTAGATGCTCTGCCGTGTAGATGCT----------------------------------------CCACC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=5995.000000 s hg38.chr20_KI270870v1_alt 35746 2 + 183433 AT s panTro5.chr20 66366021 2 + 66533130 AT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045888 2 + 62195757 AT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434149 2 - 578057 gt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959498 2 - 110113093 AT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688130 2 - 92844088 AT i rheMac8.chr10 C 0 I 112 s macFas5.chr10 96351048 2 + 96509753 GT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825375 2 - 16982598 AT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628365 2 - 3785965 AT i cerAty1.NW_012001373v1 I 148 I 2 s colAng1.NW_012114444v1 5501801 2 - 5823884 CT i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190414 2 - 397369 AT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e chlSab2.chr2 90249936 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e manLeu1.NW_012101369v1 156935 0 + 156971 C e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=168288.000000 s hg38.chr20_KI270870v1_alt 35748 36 + 183433 GTGTGTG------------------------------------CATAGAGGCACT--------GGAGTATCCAGGCGTGT s panTro5.chr20 66366023 36 + 66533130 GTGTGTG------------------------------------CATAGAGGCACT--------GGAGTATCCAGGCGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045890 36 + 62195757 GTGTGTG------------------------------------CATAGAGGCACT--------GGAGTATCCAGGCGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434151 36 - 578057 gtgtgtg------------------------------------cgtAGAGGCACT--------GGAGTATCCAGGCGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959500 34 - 110113093 GTGTGAG--------------------------------------TAGAGGCACT--------GGAGTATCCAGGCGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688244 36 - 92844088 GTGTGTG------------------------------------CCTAGAGGCACT--------GGAGTATCCAGGCGTGT i rheMac8.chr10 I 112 C 0 s macFas5.chr10 96351050 72 + 96509753 GTGTGTGTAGAGGTACTGGAGAATCCAGGCGTGTTCGTGTGTGCCTAGAGGCACT--------GGAGTATCCAGGCGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825377 34 - 16982598 GTGTGTG--------------------------------------TAGAGGCACT--------GGAGTATCCAGGCGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628369 34 - 3785965 GTGTGTG--------------------------------------TAGAGGCACT--------GGAGAATCCAGGCGTGT i cerAty1.NW_012001373v1 I 2 C 0 s chlSab2.chr2 90249936 36 - 90373283 GTGTGTG------------------------------------CCTAGAGGCACC--------AGAGAATCCAGGCGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101369v1 156935 36 + 156971 GTGTGTG------------------------------------TGTAGAGGCACT--------GGAGAATCCTGGCGTGT i manLeu1.NW_012101369v1 C 0 N 0 s colAng1.NW_012114444v1 5501803 36 - 5823884 GTGTGTG------------------------------------TGTAGAGGCACT--------GCAGTATCCAGGCGTGT i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190416 36 - 397369 --------------------------------------------GTAGATGCACCACTGTGTAGAAGCACACTGCCGAGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=141019.000000 s hg38.chr20_KI270870v1_alt 35784 35 + 183433 ----GCGTGTGTACGTAGAGGCACTGGAGTATTGACACG s panTro5.chr20 66366059 35 + 66533130 ----GCGTGTGTACGTAGAGGCACTGGAGTATTGACACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045926 35 + 62195757 ----GTGTGTGTACGTAGAGGCACTGGAGTATTGACACG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434187 35 - 578057 ----GCGTGTGTACATAGAGGCACTGGAGTATTGACACG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959534 35 - 110113093 ----GCATGTGTGAGTAGAGGCACTGGAGTATTGACACG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688280 33 - 92844088 ------GTGTGTGCCTAGAGGCACTGGAGTATTGACACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351122 33 + 96509753 ------GTGTGTGCCTAGAGGCACTGGAGTATTGACACG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825411 35 - 16982598 ----TCGTGTGTGGATAGAGGCACTGGAGTATCGACACG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628403 33 - 3785965 ------GTGTGTGCATAGAGGCACTGGAGTATTGACACG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90249972 33 - 90373283 ------GTGTATGCATAGAGGCACTGGAGTATTGACACG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5501839 33 - 5823884 ------GCGTGTGCGTGGAGACACTGGAGTATTGACACA i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 190452 39 - 397369 AGATGCTCTGCCGTGTAGATGCTCTGCCATGTAGACACA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e saiBol1.JH378156 16218626 513 + 16356641 I e cebCap1.NW_016107870v1 1083794 638 + 1231380 I e calJac3.chr5 58153871 104 + 159171411 I e aotNan1.NW_018500483v1 2619181 668 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=348251.000000 s hg38.chr20_KI270870v1_alt 35819 38 + 183433 CTAGGGGTGGACATGCC-CAGTGTGGATGCCCTGCAGTG s panTro5.chr20 66366094 38 + 66533130 CTAGGGGTGGACACGCC-CAGTGTGGATGCCCTGCAGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045961 38 + 62195757 CTAGGGGTGGACACGCC-CAGTGTGGATGCCCTGCAGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434222 38 - 578057 CTAGGGGTGGACACGCC-CAGTGTGGATGCCCTGCAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959569 38 - 110113093 CTAGGGGTGGACACACC-CAGTGTGGATGCCCTGCAGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688313 38 - 92844088 CTAGGGGTGAACATGCC-CAGTGTGGATGCCCTGCAATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351155 38 + 96509753 CTAGGGGTGAACATGCC-CAGTGTGGATGCCCTGCAATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825446 38 - 16982598 CTAGGGGTGAACATGCC-CAGTGTGGATGCCCTGCAGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628436 38 - 3785965 CTAGGGGTGAACACGCC-CAGTGTGGATGCCCTGCAATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250005 38 - 90373283 CTAGGGGTGAACACGCC-CAGTGTGGATGCCCTGCAATG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5501872 38 - 5823884 CTAGGGGTGAACACGCC-CAGTGTGGATGCCCTGCAATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58153975 38 + 159171411 CTAGGGGTGGACGCGCC-CAGCGTGGGTGCCCTGCAGTA i calJac3.chr5 I 104 C 0 s saiBol1.JH378156 16219139 38 + 16356641 CTAGGGGTGGGCGCGCC-CAGTGTGGCTGCCCTGCAGTA i saiBol1.JH378156 I 513 C 0 s cebCap1.NW_016107870v1 1084432 38 + 1231380 CTAGGGGTGGGTGCGCC-CAGTGTGGCTGCCCCACAGTA i cebCap1.NW_016107870v1 I 638 C 0 s aotNan1.NW_018500483v1 2619849 38 + 11732439 CTAGGGGTGGATGTGCC-CAGTGTGGGTGCCCCGCAGTA i aotNan1.NW_018500483v1 I 668 C 0 s dasNov3.JH569290 190491 39 - 397369 CTGAGGGTGGAGGCTCTGCTGCGTAGATGCTCCACCGTG i dasNov3.JH569290 C 0 I 527 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e otoGar3.GL873542 159957 0 - 22939663 I a score=255612.000000 s hg38.chr20_KI270870v1_alt 35857 37 + 183433 CTACCCTGGGAAGCAGATGATCTGGGCCATCTGGTGG s panTro5.chr20 66366132 37 + 66533130 CTACCCTGGGAAGCAGATGATCTGGGCCATCTGGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62045999 37 + 62195757 CTACCCTGGGAAGCAGATGATCTGGGCCATCTGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434260 37 - 578057 TTACCCTGGGAAGCAGGTGATCTGGGCCATCTGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959607 37 - 110113093 TTATCCTGGGAAGCAGATGATCTGGGCCGTCTGGTGG i nomLeu3.chr13 C 0 T 16 s rheMac8.chr10 92688351 37 - 92844088 TTACCCTGGGAAGCAGATGATGTGGGCCATCTGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351193 36 + 96509753 TTACCCTGGGAAGCAGATGATGTGGGCC-TCTGGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825484 37 - 16982598 TTACCCTGGGAAGCAGATGATGTGGGCCATCTGGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628474 37 - 3785965 TTACCCTGGGAAGCAGATGATGTGGGCCATCTGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250043 37 - 90373283 TTACCCTGGGAAGCAGATGATGTGGGCCATCTGGTCG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5501910 37 - 5823884 TTACCCTGGGAGGCAGATGATATGGGCCATCTGGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154013 32 + 159171411 TTGCCCTGAGAAGCAGATA---CGGGCCA--TGGTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219177 32 + 16356641 TTGCCCTGGGAAGCAGATA---CGGGCCA--TGGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084470 32 + 1231380 TTGCCCTGGGAAGCAGATA---CGGGCCA--TGGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2619887 32 + 11732439 TTGCCCTGGGAAGCAGATA---TGGGACA--TGGTGT i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e otoGar3.GL873542 159957 0 - 22939663 I a score=649616.000000 s hg38.chr20_KI270870v1_alt 35894 87 + 183433 CCACACTGGTACTGTGCTGCTCTGTGTTTAGCTGGGCATGTGCTCTGGGCTGGGCATGAGACAAAATGAGGATAGCTGCTGGGCTGT s panTro5.chr20 66366169 87 + 66533130 CCACACTGGTACTGTGCTGCTCTGTGTTTAGCTGGGCGTGTGCTCTGGGCTGGGCATGAGACAAAATGAGGATAGCTGCTGGGCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046036 87 + 62195757 CCACACTGGTACTGTGCTGCTCTGTGTTTAGCTGGGCGTGTGCTCTGGGCTGGGCATGAGACAAAATGAGGATAGCTGCTGGGCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434297 87 - 578057 CCACCCTGGCACTGTGCTGCTCTGTGTTTAGCTGGGCATGTGCTCTGGGCTGGGCATGAGGCAAAATGAGGACAGCTGCTGGGCTGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92688388 87 - 92844088 CCACACTGGCACTGTGCTGCTCTGTGTTTAGCTGGGCATGTGCTCTGGGCTGGGCACGAGGCAAGATGAGGACAGCTGCTGGTCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351229 87 + 96509753 CCACACTGGCACTGTGCTGCTCTGTGTTTAGCTGGGCATGTGCTCTGGGCTGGGCACGAGGCAAGATGAGGACAGCTGCTGATCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825521 87 - 16982598 CCACACTGGCACTGTGCTGCTCTGTGTTTAGCTGGGCATGTGCTCTGGGCTGGGCACGAGGCAAGATGAGGACAGCTGCTGGTCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628511 87 - 3785965 CCACACTGGCACTGTGCTGCTCTGTGTTTAGCTGGGCATGTGCTCTGGGCTGGGCACAAGGCAAGATGAGGACAGCTGCTGGGCTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250080 87 - 90373283 CCACACTGGCACTGTGCTGCTCTGTGTTTAGCTGGGCATGTGCTCTGGGCTGGGCACGAGGCAAGATGAGGACAGCTGCTGGGCTGT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5501947 87 - 5823884 CCACACTGGCACTGTGCTGCTCTGTGTTTAGCCGGGCATGTGCTCTGGGCTGGGCAGGAGGCAAGATGAGGACAGCTGCTGGGCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154045 85 + 159171411 CCACACTGGCACTGTGCTGCTC--TGTTTAGCTGGGCATACACTCTGGGCTGGGCAGGAAGTAAGATGAGGACAGCTGCTGGGCTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219209 85 + 16356641 CCACACTGGCACTGTGCTGCTC--TGTTTAGCTGGGCATGTGCTCTGGGCTTGGCAGGAGGTAAGATGAGGACAGCTGCCCGGCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084502 85 + 1231380 CCATACTGGCACTGCACTGCTC--TGTTTAGCTGGGCATGCGCTCTGGGCTTGGCAGGAGATGAGATGAGGACCACTGCTGGGCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2619919 85 + 11732439 CCACGCTGGCACTGTGCTGCTC--TGTTTAGCTGGGCATGCGCTCTGGGCTGGGCATGAGGTAAGATGAGGACGGCTGCTGGGCtgt i aotNan1.NW_018500483v1 C 0 I 771 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e nomLeu3.chr13 109959644 16 - 110113093 T e otoGar3.GL873542 159957 0 - 22939663 I a score=864346.000000 s hg38.chr20_KI270870v1_alt 35981 141 + 183433 GGATAGTTGTTCACAGGGGTGCAGGCTGTTGTAGGTGGGCCAGGAGGGGCTGGGCAGCCCATGAGGGTGAGGCTGAGACTCCACACTGAGCCCAGGTTTAGGGGACCTGGTGGGGGTCACAGCCTCCCCTGTCCCAGACTT s panTro5.chr20 66366256 141 + 66533130 GGATAGTTGTTCACAGGGGTGCAGGCTGTTGTAGGTGGGCCAGGAGGGGCTGGGCAGCCCATGAGGGTGAGGCTGAGACTCCACACTGAGTCCAGGTTTAGGGGACCTGGTGGGGGTCACAGCCTCCCCTGTCCCAGACTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046123 141 + 62195757 GGATAGTTGTTCACAGGGGTGCAGGCTGTTGTAGGTGGGCCAGGAGGGGCTGGGCAGCCCATGAGGGTGAGGCTGAGACTCCACACTGAGTCCAGGTTTAGGGGACCTGGTGGGGGTCACAGCCTCCCCTGTCTCAGACTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434384 141 - 578057 GGACAGTTGTTCACAGGGGTGCAGGCTGTTGTAGGTGGGCCAGGATGGGCTGGGCAGCCCATGAGGGTGAGGCTGAGACTCCACGCTGAGCCCAGGTTTAGGGGACCTGGTGGGGGTCACAGCCTCCCCTGTCCCAGACTT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92688475 141 - 92844088 GAACAGTCGTTCGCAGGGCTGCAGGCTCTTGCAGGTGGGCCAAGAGGGGCTGCGCAGCCCATGAGGGTGAGGCTGAGACTCCACACTGAGCCCAGGTTTAGGGGACTTGGTGGGGGTCGCATCCTCCCCTGTCCCAGACTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351316 141 + 96509753 GAACAGTCGTTCGCAGGGCTGCAGGCTCTTGCAGGTGGGCCAAGAGGGGCTGCGCAGCCCATGAGGGTGAGGCTGAGACTCCACACTGAGCCCAGGTTTAGGGGACTTGGTGGGGGTCACATCCTCCCCTGTCCCAGACTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825608 141 - 16982598 GAACAGTCGTTCGCAGGGCTGCAGGCTCTTGCAGGTGGGCCAAGAGGGGCTGCGCAGCCCATGAGGGTGAGGCTGAGACTCCACACTGAGCCCAGGTTTAGGGGACTTGGTGGGGGTCACATCCTCCCCTGTCCCAGACTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628598 141 - 3785965 GGACAGTTGTTCGCAGGGCTGCAGGCTCTTGCAGGTGGGCCAAGAGGGGCTGCACAGCCCATGAGGGTGAGGCTGAGACTCCACACTGAGCCCAGGTTTAGGGGACTTGGTGGGGGTCACATCCTCCCCTGTCCCAGACTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250167 141 - 90373283 GGACAGTTGTTCGCAGGGCTGCAGGCTCTTGCAGGTGGGCCAAGAGGGGCTGCGCAGCCCATGAGGGTGAGGCTGAGACTCCACACTGAGCCCAGGTTTAGGGGACTTGGTGGGGGTCACATCCTCCCCTGTCCCAGACTT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5502034 141 - 5823884 GGACAGTTGTTCGCAGGGCTGCAGGTTGTTGCAGGTGGGCCAAGAGGGGCTGCGCAGCCCATGAGGGTGAGGCTGAGACTCCACACTGAGCCCAGGTTTAGGGGACTTGGTGGGGGTCACATCCTCCCCTGTCCCAGACTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154130 137 + 159171411 GGACAGTTGTTCACAGGGCTGCA-TGCCTTGCAGGTGGGCCTGGAGGGGCTGGGCAGCCCTTAAT-GGAGGGCTGAAATTGCACGCTGAGCCCAGGTTT-GGGGTCCTGGTGGGGGTCACAT-CTGCCCTGTCCCAGGCTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219294 139 + 16356641 GGACAGTTGTTTACAAGGCTGCAGCTTCTTGCAGGTGGGCCAGGAGGGGCTGGGCAGCCCTTGAT-GGGGGGCTGAAACTGCATGCTGAGCCCAGGTTTAGGGGTCCTGGTGGAGGTCACAT-CTGCCCTGTCCCAGGCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084587 140 + 1231380 GGACAGTTGTTCACAGGGCTGCAGGCTCTTGCAGGTGGGCCAGGAGGGGCTGGGCAGCCCTTAATGGGGGGGCTGAAACTGCACGCTGAGCCCGGGTTTAGGGGTCCTGGTGGGGGTCACAT-CTGCCCTGTCCCAGGCTT i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959644 16 - 110113093 T e otoGar3.GL873542 159957 0 - 22939663 I a score=10675.000000 s hg38.chr20_KI270870v1_alt 36122 3 + 183433 CTC s panTro5.chr20 66366397 3 + 66533130 CTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046264 3 + 62195757 CTC i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92688616 3 - 92844088 GTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351457 3 + 96509753 GTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825749 3 - 16982598 GTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628739 3 - 3785965 ATC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250308 3 - 90373283 GTC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5502175 3 - 5823884 GTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154267 3 + 159171411 GTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219433 3 + 16356641 GTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084727 3 + 1231380 GTT i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434525 0 - 578057 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959644 16 - 110113093 T e otoGar3.GL873542 159957 0 - 22939663 I a score=113272.000000 s hg38.chr20_KI270870v1_alt 36125 16 + 183433 CTGGCCTCTCTCATGT s panTro5.chr20 66366400 16 + 66533130 CTGGCCTCTCTCATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046267 16 + 62195757 CTGGCCTCTCTCATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434525 16 - 578057 CTGGCCTCTCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959628 16 - 110113093 CTGGGCCGTCTGGTGG i nomLeu3.chr13 T 16 C 0 s rheMac8.chr10 92688619 16 - 92844088 CTGGCCCCTCTCATAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351460 16 + 96509753 CTGGCCCCTCTCATAT i macFas5.chr10 C 0 T 16 s macNem1.NW_012014244v1 16825752 16 - 16982598 CTGGCCCCTCTCATAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628742 16 - 3785965 CTGGCCCCTCTCATAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250311 16 - 90373283 CTGGCCCCTCTCATAT i chlSab2.chr2 C 0 I 172 s colAng1.NW_012114444v1 5502178 16 - 5823884 CTGGCCCCTCTCCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154270 16 + 159171411 CTGGCCCCTCTCATAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219436 16 + 16356641 CTGGCCCCTCTCATAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084730 16 + 1231380 CTGGCCCCTCTCATAT i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=130046.000000 s hg38.chr20_KI270870v1_alt 36141 51 + 183433 CCTAT-GAGAC-CCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCA s panTro5.chr20 66366416 51 + 66533130 CCTAT-GAGAC-CCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046283 51 + 62195757 CCTAT-GAGAC-CCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434541 51 - 578057 CCTAT-GAGAC-CCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959644 52 - 110113093 CCCATAGAGAC-CCCCTCAGTGTCCAGCCTCAGGACCTTCAGAGACCCCCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688635 52 - 92844088 CCTGTAGAGAC-CCCCTCACTGTTCACCCTTGTGTCCTGTAGAGACCCCCCCC i rheMac8.chr10 C 0 I 2 s macNem1.NW_012014244v1 16825768 52 - 16982598 CCTGTAGAGAC-CCCCTCACTGTTCACCCTTGTGTCCTGTAGAGACCCCCCCC i macNem1.NW_012014244v1 C 0 I 3 s cerAty1.NW_012001373v1 3628758 52 - 3785965 CCTGTAGAGAC-CCCCTCACTGTTCACCCTTGTGTCCTGTAGAGACCCCCCCC i cerAty1.NW_012001373v1 C 0 I 1 s colAng1.NW_012114444v1 5502194 53 - 5823884 CCTGTAGAGACACCCCTCAGTGTCCACCCCCATGGCCCGTAGAGACCACCTCA i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e chlSab2.chr2 90250327 172 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351476 16 + 96509753 T a score=49687.000000 s hg38.chr20_KI270870v1_alt 36192 21 + 183433 CTGTCCACTCTCATGTCCTAT s panTro5.chr20 66366467 21 + 66533130 CTGTCCACTCTCGTGTCCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046334 21 + 62195757 CTGTCCACTCTCGTGTCCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434592 21 - 578057 CTGTCCACCCTCATGTCCTAT i gorGor5.CYUI01015848v1 C 0 I 32 s nomLeu3.chr13 109959696 21 - 110113093 GTGTCCACCCTCATGTCCCAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688689 21 - 92844088 GTGTCCAGCCTCATGTTCTGT i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96351460 21 + 96509753 CTGGCCCCTCTCATATCCTGT i macFas5.chr10 T 16 C 0 s macNem1.NW_012014244v1 16825823 21 - 16982598 GTGTCCAGCCTCATGTTCTGT i macNem1.NW_012014244v1 I 3 C 0 s cerAty1.NW_012001373v1 3628811 21 - 3785965 GTGTCCAGCCTCATGTTCTGT i cerAty1.NW_012001373v1 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250327 172 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=3276.000000 s hg38.chr20_KI270870v1_alt 36213 1 + 183433 A s panTro5.chr20 66366488 1 + 66533130 A i panTro5.chr20 C 0 I 408 s panPan2.chr20 62046355 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434645 1 - 578057 A i gorGor5.CYUI01015848v1 I 32 C 0 s nomLeu3.chr13 109959717 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688710 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351481 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825844 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628832 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250327 172 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=70230.000000 s hg38.chr20_KI270870v1_alt 36214 27 + 183433 GAGACCCCCTCACTGTCCACCCTCATG s panTro5.chr20 66366897 27 + 66533130 GAGACCCCCTCACTGTCCACCCTCATG i panTro5.chr20 I 408 C 0 s panPan2.chr20 62046356 27 + 62195757 GAGACCCCCTCACTCTCCACCCTCATG i panPan2.chr20 C 0 I 102 s gorGor5.CYUI01015848v1 434646 27 - 578057 GAGACCCCCTCACTGTCCACCCTCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959718 27 - 110113093 GAGACCCCCTCAGTATCCACCCTCATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688711 27 - 92844088 GCAATCCTCTCAGTGTCCAGCCTCATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351482 27 + 96509753 GAGACCCCCTCACTGTTCACCCTTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825845 27 - 16982598 GCGATCCTCTCAGTGTCCAGCCTCGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628833 27 - 3785965 GAGATCCTCTCAGTGTCCAGCCTCATG i cerAty1.NW_012001373v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250327 172 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=415.000000 s hg38.chr20_KI270870v1_alt 36241 1 + 183433 T s panTro5.chr20 66366924 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046485 1 + 62195757 T i panPan2.chr20 I 102 C 0 s gorGor5.CYUI01015848v1 434673 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959745 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688738 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351509 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825872 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628860 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250327 172 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=19983.000000 s hg38.chr20_KI270870v1_alt 36242 6 + 183433 CCTATA s panTro5.chr20 66366925 6 + 66533130 CCTATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046486 6 + 62195757 CCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434674 6 - 578057 CCTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959746 6 - 110113093 CCCATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688739 6 - 92844088 ACTGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351510 6 + 96509753 CCTGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825873 6 - 16982598 CCTGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3628861 6 - 3785965 CCTGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250499 6 - 90373283 CCTGTA i chlSab2.chr2 I 172 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=34768.000000 s hg38.chr20_KI270870v1_alt 36248 19 + 183433 GAGA-CCCCCTCACTGTCAA s panTro5.chr20 66366931 19 + 66533130 GAGA-CCCCCTCACTGTCCA i panTro5.chr20 C 0 T 461 s panPan2.chr20 62046492 19 + 62195757 GAGA-CCCCCTCACTGTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434680 19 - 578057 GAGA-CCCCCTCACTGTCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959752 19 - 110113093 GAGA-CCCCCTCACTGTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688745 20 - 92844088 GAGACCCCCCTCAGTGTCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351516 20 + 96509753 GAGACCCCCCCCAGTGTCCA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3628867 19 - 3785965 GAGA-CCATGTCACCATCCA i cerAty1.NW_012001373v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250505 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=8454.000000 s hg38.chr20_KI270870v1_alt 36267 6 + 183433 CTCTCA s panPan2.chr20 62046511 6 + 62195757 CCCTCA i panPan2.chr20 C 0 T 161 s gorGor5.CYUI01015848v1 434699 6 - 578057 CCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959771 6 - 110113093 CCCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688765 6 - 92844088 CCCTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351536 6 + 96509753 GCCTCA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3628886 6 - 3785965 GCCTCG i cerAty1.NW_012001373v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250505 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366950 461 + 66533130 T e otoGar3.GL873542 159957 0 - 22939663 I a score=5982.000000 s hg38.chr20_KI270870v1_alt 36273 8 + 183433 TGTCCTAT s gorGor5.CYUI01015848v1 434705 8 - 578057 TGTCCTGT i gorGor5.CYUI01015848v1 C 0 I 1 s nomLeu3.chr13 109959777 8 - 110113093 TGTCCCAT i nomLeu3.chr13 C 0 I 1 s rheMac8.chr10 92688771 8 - 92844088 TGTTCTGT i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96351542 8 + 96509753 TGTTCTGT i macFas5.chr10 C 0 I 1 s cerAty1.NW_012001373v1 3628892 7 - 3785965 TG-TCTGT i cerAty1.NW_012001373v1 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250505 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 161 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366950 461 + 66533130 T e otoGar3.GL873542 159957 0 - 22939663 I a score=139276.000000 s hg38.chr20_KI270870v1_alt 36281 68 + 183433 GAGACCCCCTCACTGTCCACCCTCATGGCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTA s panTro5.chr20 66366489 68 + 66533130 GAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTA i panTro5.chr20 T 461 C 0 s panPan2.chr20 62046356 68 + 62195757 GAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTA i panPan2.chr20 T 161 C 0 s gorGor5.CYUI01015848v1 434714 67 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTAT-GAGACCCCCTCACTGTCCACCCTCATGTCCTGTA i gorGor5.CYUI01015848v1 I 1 T 168 s nomLeu3.chr13 109959786 68 - 110113093 GAGACCCCCTCAGTATCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGTCCCATA i nomLeu3.chr13 I 1 C 0 s rheMac8.chr10 92688780 67 - 92844088 GAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACATCACCATCCAGCCTCGTGT-CTGTA i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96351551 34 + 96509753 GAGATCC----------------------------------CCTCAGTGTCCAGCCTCGTGTCCTGTA i macFas5.chr10 I 1 C 0 s cerAty1.NW_012001373v1 3628900 68 - 3785965 GAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTA i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90250505 68 - 90373283 GAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCCCCTCAGTGTCCAGCCTCGTGGCCTGTA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=48310.000000 s hg38.chr20_KI270870v1_alt 36349 19 + 183433 GAGACCCCCTCACTGTCCA s panTro5.chr20 66366557 19 + 66533130 GAGACCCCCTCACTGTCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046424 19 + 62195757 GAGACCCCCTCACTGTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434613 18 - 578057 GAGA-CCCCTCACTGTCCA i gorGor5.CYUI01015848v1 T 168 C 0 s nomLeu3.chr13 109959854 19 - 110113093 GAGACCCCCTCACTGTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688847 19 - 92844088 GAGACCACGTCACCGCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351585 19 + 96509753 GAGACCACATCACCATCCA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3628968 19 - 3785965 GAGACCACGTCACCGTCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250573 19 - 90373283 GAGACCACGTCACCGTCCA i chlSab2.chr2 C 0 T 274 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=25247.000000 s hg38.chr20_KI270870v1_alt 36368 15 + 183433 CTCTCATGTCCTATA s panTro5.chr20 66366576 15 + 66533130 CTCTCATGGCCTATA i panTro5.chr20 C 0 I 151 s panPan2.chr20 62046443 15 + 62195757 CTCTCATGTCCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434631 15 - 578057 CTCTCATGTCCTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959873 15 - 110113093 CCCTCATGTCCCATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688866 15 - 92844088 GCCTCGTGGCCTGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351604 14 + 96509753 GCCTCGT-GTCTGTA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3628987 14 - 3785965 GCCTCGT-GTCTGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250318 15 - 90373283 CTCTCATATCCTGTA i chlSab2.chr2 T 274 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=29625.000000 s hg38.chr20_KI270870v1_alt 36383 15 + 183433 GAGACCCCCTCACTG s panPan2.chr20 62046458 15 + 62195757 GAGACCCCCTCACTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434646 15 - 578057 GAGACCCCCTCACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959888 15 - 110113093 GAGACCCCCTCACTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688881 15 - 92844088 GAGACCACGTCACCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351618 15 + 96509753 GAGACCACGTCACCG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3629001 15 - 3785965 GAGACCACGTCACCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250333 15 - 90373283 GAGACCCCCTCACTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366591 151 + 66533130 I e otoGar3.GL873542 159957 0 - 22939663 I a score=31800.000000 s hg38.chr20_KI270870v1_alt 36398 13 + 183433 TCCACCCTCGTGT s panTro5.chr20 66366742 13 + 66533130 TCCACCCTCATGT i panTro5.chr20 I 151 C 0 s panPan2.chr20 62046473 13 + 62195757 TCCACCCTCATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434661 13 - 578057 TCCACCCTCATGT i gorGor5.CYUI01015848v1 C 0 I 34 s nomLeu3.chr13 109959903 13 - 110113093 TCCACCCTCATGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688896 13 - 92844088 CCCAGCCTCGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351633 13 + 96509753 CCCAGCCTCGTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3629016 13 - 3785965 TCCAGCCTCGTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250348 13 - 90373283 TTCACCCTTGTGT i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=3600.000000 s hg38.chr20_KI270870v1_alt 36411 1 + 183433 C s panTro5.chr20 66366755 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046486 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434708 1 - 578057 C i gorGor5.CYUI01015848v1 I 34 C 0 s nomLeu3.chr13 109959916 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688909 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351646 1 + 96509753 C i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3629029 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 I 7 s chlSab2.chr2 90250361 1 - 90373283 C i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=5713.000000 s hg38.chr20_KI270870v1_alt 36412 3 + 183433 CTA s panTro5.chr20 66366756 3 + 66533130 CTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046487 3 + 62195757 CTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434709 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959917 3 - 110113093 CCA i nomLeu3.chr13 C 0 I 34 s rheMac8.chr10 92688910 3 - 92844088 CTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351647 3 + 96509753 CTG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250362 3 - 90373283 CTG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=26558.000000 s hg38.chr20_KI270870v1_alt 36415 13 + 183433 TAGAGACCCCCTC s panTro5.chr20 66366759 13 + 66533130 TAGAGACCCCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046490 13 + 62195757 TAGAGACCCCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434712 13 - 578057 TAGAGACCCCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959954 13 - 110113093 TAGAGACCCCCTC i nomLeu3.chr13 I 34 C 0 s rheMac8.chr10 92688913 13 - 92844088 GAGAGACCACGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351650 13 + 96509753 GAGAGACCACGTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250365 13 - 90373283 TAGAGACCCCCCC i chlSab2.chr2 C 0 T 51 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=7936.000000 s hg38.chr20_KI270870v1_alt 36428 9 + 183433 ACTGTCAAC s panTro5.chr20 66366772 9 + 66533130 ACTGTCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046503 9 + 62195757 ACTGTCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434725 9 - 578057 ACTGTCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959967 9 - 110113093 ACTGTCCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688926 9 - 92844088 ACCGCCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351663 4 + 96509753 ACCG----- i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250378 51 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=4296.000000 s hg38.chr20_KI270870v1_alt 36437 5 + 183433 TCTCA s panTro5.chr20 66366781 5 + 66533130 CCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046512 5 + 62195757 CCTCA i panPan2.chr20 C 0 T 161 s gorGor5.CYUI01015848v1 434734 5 - 578057 CCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959976 5 - 110113093 CCTCA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250378 51 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351667 0 + 96509753 C a score=1620.000000 s hg38.chr20_KI270870v1_alt 36442 8 + 183433 TGTCCTAT s panTro5.chr20 66366786 8 + 66533130 TGGCCTGT i panTro5.chr20 C 0 T 203 s gorGor5.CYUI01015848v1 434739 8 - 578057 TGTCCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959981 7 - 110113093 TGTCCCA- i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250378 51 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 161 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351667 0 + 96509753 C a score=20575.000000 s hg38.chr20_KI270870v1_alt 36450 25 + 183433 GAGACCCCCTCACTCTCCACCCTCA s panTro5.chr20 66366591 25 + 66533130 GAGACCCCCTCACTCTCCACCCTCA i panTro5.chr20 T 203 C 0 s panPan2.chr20 62046356 25 + 62195757 GAGACCCCCTCACTCTCCACCCTCA i panPan2.chr20 T 161 C 0 s gorGor5.CYUI01015848v1 434747 25 - 578057 GAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959988 24 - 110113093 GAGAccccctca-tgtccaccctca i nomLeu3.chr13 C 0 T 92 s macFas5.chr10 96351667 10 + 96509753 ---------------CCCAGCCTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250378 51 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2054.000000 s hg38.chr20_KI270870v1_alt 36475 3 + 183433 TGG s panTro5.chr20 66366616 3 + 66533130 TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046381 3 + 62195757 TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434772 3 - 578057 TGT i gorGor5.CYUI01015848v1 C 0 T 101 s macFas5.chr10 96351677 3 + 96509753 TGG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250378 51 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960012 92 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=3910.000000 s hg38.chr20_KI270870v1_alt 36478 4 + 183433 CCTG s panTro5.chr20 66366619 4 + 66533130 CCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046384 4 + 62195757 CCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434674 4 - 578057 CCTG i gorGor5.CYUI01015848v1 T 101 C 0 s macFas5.chr10 96351680 4 + 96509753 CCTG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250378 51 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960012 92 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=34784.000000 s hg38.chr20_KI270870v1_alt 36482 30 + 183433 TAGAGACCCCCTCACTGTCCACCCTCATGG s panTro5.chr20 66366623 30 + 66533130 TAGAGACCCCCTCACTGTCCACTCTCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046388 30 + 62195757 TAGAGACCCCCTCACTGTCCACCCTCATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434678 30 - 578057 TAGAGACCCCCTCACTGTCTACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959920 30 - 110113093 TAGAGACCCCCTCACTGTCCACCCTCATGT i nomLeu3.chr13 T 92 C 0 s macFas5.chr10 96351684 30 + 96509753 GAGAGACCACGTCACCGTCCAGCCTCGTGG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250378 51 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=55609.000000 s hg38.chr20_KI270870v1_alt 36512 33 + 183433 CCTATAGAGACCCCCTCACTGTCCACCCTCATG s panTro5.chr20 66366653 33 + 66533130 CCTATAGAGACCCCCTCACTGTCCACCCTCATG i panTro5.chr20 C 0 I 41 s panPan2.chr20 62046418 33 + 62195757 CCTGTAGAGACCCCCTCACTGTCCACTCTCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434708 33 - 578057 CCTGTAGAGACCCCCTCACTGTCCACCCTCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959950 33 - 110113093 CCCATAGAGACCCCCTCACTGTCCACCCTCATG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351714 33 + 96509753 CCTGTAGAGACCACGTCACTGTCCAGCCTCGTG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250327 33 - 90373283 CCTGTAGAGACCCCCTCACTCTTCACCCTTGTG i chlSab2.chr2 T 51 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=3340.000000 s hg38.chr20_KI270870v1_alt 36545 3 + 183433 TCC s panPan2.chr20 62046451 3 + 62195757 TCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434741 3 - 578057 TCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959983 3 - 110113093 TCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351747 3 + 96509753 GCC i macFas5.chr10 C 0 T 134 s chlSab2.chr2 90250360 3 - 90373283 TCC i chlSab2.chr2 C 0 I 2 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366686 41 + 66533130 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=-2087.000000 s hg38.chr20_KI270870v1_alt 36548 3 + 183433 TAT s panPan2.chr20 62046454 3 + 62195757 TGT i panPan2.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 434744 3 - 578057 TAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959986 2 - 110113093 CA- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351616 2 + 96509753 TA- i macFas5.chr10 T 134 C 0 s chlSab2.chr2 90250365 2 - 90373283 TA- i chlSab2.chr2 I 2 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366686 41 + 66533130 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=34752.000000 s hg38.chr20_KI270870v1_alt 36551 25 + 183433 GAGA-CCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366727 25 + 66533130 GAGA-CCCCCTCACTCTCCACCCTCA i panTro5.chr20 I 41 C 0 s panPan2.chr20 62046458 25 + 62195757 GAGA-CCCCCTCACTCTCCACCCTCA i panPan2.chr20 I 1 C 0 s gorGor5.CYUI01015848v1 434747 25 - 578057 GAGA-CCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959988 24 - 110113093 GAGA-ccccctca-tgtccaccctca i nomLeu3.chr13 C 0 T 371 s macFas5.chr10 96351618 25 + 96509753 GAGA-CCACGTCACCGCCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250367 26 - 90373283 GAGACCCCCCCCAGTGTCCACCCTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=11847.000000 s hg38.chr20_KI270870v1_alt 36576 9 + 183433 TGTCCTATA s panTro5.chr20 66366752 9 + 66533130 TGTCCTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046483 9 + 62195757 TGTCCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434772 9 - 578057 TGTCCTGTA i gorGor5.CYUI01015848v1 C 0 T 201 s nomLeu3.chr13 109959641 9 - 110113093 TGGCCCATA i nomLeu3.chr13 T 371 C 0 s macFas5.chr10 96351643 9 + 96509753 TGGCCTGGA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250393 9 - 90373283 TGTTCTGTA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=30927.000000 s hg38.chr20_KI270870v1_alt 36585 21 + 183433 GAGACCCCCTCACTGTCCACC s panTro5.chr20 66366761 21 + 66533130 GAGACCCCCTCACTGTCCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046492 21 + 62195757 GAGACCCCCTCACTGTCCACC i panPan2.chr20 C 0 T 237 s gorGor5.CYUI01015848v1 434580 21 - 578057 GAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 T 201 C 0 s nomLeu3.chr13 109959650 21 - 110113093 GAGACCCCCTCAGTGTCCAGC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351652 21 + 96509753 GAGACCACGTCACCGCCCAGC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250402 21 - 90373283 GCGATCCTCTCAGTGTCCAGC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=15234.000000 s hg38.chr20_KI270870v1_alt 36606 12 + 183433 CTCATGGCCTAT s panTro5.chr20 66366782 12 + 66533130 CTCATGGCCTGT i panTro5.chr20 C 0 I 1 s panPan2.chr20 62046276 12 + 62195757 CTCATGTCCTAT i panPan2.chr20 T 237 C 0 s gorGor5.CYUI01015848v1 434601 12 - 578057 CTCATGTCCTAT i gorGor5.CYUI01015848v1 C 0 I 168 s nomLeu3.chr13 109959671 12 - 110113093 CTCAGGACCTTC i nomLeu3.chr13 C 0 I 1 s macFas5.chr10 96351673 12 + 96509753 CTCGTGGCCTGG i macFas5.chr10 C 0 I 1 s chlSab2.chr2 90250423 12 - 90373283 CTCATGGCCTGT i chlSab2.chr2 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=18381.000000 s hg38.chr20_KI270870v1_alt 36618 11 + 183433 GAGACCCCCTC s panTro5.chr20 66366795 11 + 66533130 GAGACCCCCTC i panTro5.chr20 I 1 C 0 s panPan2.chr20 62046288 11 + 62195757 GAGACCCCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434781 11 - 578057 GAGACCCCCTC i gorGor5.CYUI01015848v1 I 168 C 0 s nomLeu3.chr13 109959684 11 - 110113093 GAGACCCCCTC i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96351686 11 + 96509753 GAGACCACGTC i macFas5.chr10 I 1 C 0 s chlSab2.chr2 90250436 11 - 90373283 GAGACCCCCCT i chlSab2.chr2 I 1 T 68 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=22529.000000 s hg38.chr20_KI270870v1_alt 36629 17 + 183433 ACTGTCCACCCTCATGT s panTro5.chr20 66366806 17 + 66533130 ACTCTCCACCCTCAGGA i panTro5.chr20 C 0 T 272 s panPan2.chr20 62046299 17 + 62195757 ACTGTCCACTCTCGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434792 17 - 578057 ACTGTCCACTCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959695 17 - 110113093 AGTGTCCACCCTCATGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351697 17 + 96509753 ACCGTCCAGCCTCGTGG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250379 17 - 90373283 AGTGTCCACCCTCATGT i chlSab2.chr2 T 68 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=46743.000000 s hg38.chr20_KI270870v1_alt 36646 31 + 183433 CCTATAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366551 31 + 66533130 CCTGTAGAGACCCCCTCACTGTCCACTCTCA i panTro5.chr20 T 272 C 0 s panPan2.chr20 62046316 31 + 62195757 CCTGTAGAGACCCCCTCACTGTCCACTCTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434809 31 - 578057 CCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 T 169 s nomLeu3.chr13 109959712 31 - 110113093 CCCATAGAGACCCCCTCAGTATCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351714 31 + 96509753 CCTGTAGAGACCACGTCACTGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250396 31 - 90373283 TCTGTAGCGATCCTCTCAGTGTCCAGCCTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=7716.000000 s hg38.chr20_KI270870v1_alt 36677 5 + 183433 TGGCC s panTro5.chr20 66366582 5 + 66533130 TGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046347 5 + 62195757 TGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434671 5 - 578057 TGTCC i gorGor5.CYUI01015848v1 T 169 C 0 s nomLeu3.chr13 109959743 5 - 110113093 TGTCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351745 5 + 96509753 TGGCC i macFas5.chr10 C 0 T 290 s chlSab2.chr2 90250427 5 - 90373283 TGGCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=19089.000000 s hg38.chr20_KI270870v1_alt 36682 16 + 183433 TATAGAGA-CCCCCTCA s panTro5.chr20 66366587 16 + 66533130 TATAGAGA-CCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046352 16 + 62195757 TGTAGAGA-CCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434676 16 - 578057 TGTAGAGA-CCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959748 16 - 110113093 CATAGAGA-CCCCCTCA i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250432 17 - 90373283 TGTAGAGACCCCCCTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 290 + 96509753 T a score=21426.000000 s hg38.chr20_KI270870v1_alt 36698 16 + 183433 CTGTCCACCCTCATGG s panTro5.chr20 66366603 16 + 66533130 CTCTCCACCCTCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046368 16 + 62195757 CTCTCCACCCTCATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434692 16 - 578057 CTGTCTACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959764 16 - 110113093 CTGTCCACCCTCATGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351460 16 + 96509753 CTGGCCCCTCTCATAT i macFas5.chr10 T 290 C 0 s chlSab2.chr2 90250449 16 - 90373283 GTGTCCACCCTCATGT i chlSab2.chr2 C 0 T 138 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=29037.000000 s hg38.chr20_KI270870v1_alt 36714 15 + 183433 CCTGTAGAGACCCCC s panTro5.chr20 66366619 15 + 66533130 CCTGTAGAGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046384 15 + 62195757 CCTGTAGAGACCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434708 15 - 578057 CCTGTAGAGACCCCC i gorGor5.CYUI01015848v1 C 0 T 102 s nomLeu3.chr13 109959780 15 - 110113093 CCCATAGAGACCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351476 15 + 96509753 CCTGTAGAGACCCCC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250327 15 - 90373283 CCTGTAGAGACCCCC i chlSab2.chr2 T 138 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=9842.000000 s hg38.chr20_KI270870v1_alt 36729 7 + 183433 TCACTCT s panTro5.chr20 66366634 7 + 66533130 TCACTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046399 7 + 62195757 TCACTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 7 - 578057 TCACTGT i gorGor5.CYUI01015848v1 T 102 C 0 s nomLeu3.chr13 109959795 7 - 110113093 TCAGTAT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351491 7 + 96509753 TCACTGT i macFas5.chr10 C 0 T 38 s chlSab2.chr2 90250342 7 - 90373283 TCACTCT i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=26726.000000 s hg38.chr20_KI270870v1_alt 36736 23 + 183433 CCACCCTCATGTCCTATAGAGAC s panTro5.chr20 66366641 23 + 66533130 CCACTCTCATGGCCTATAGAGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046406 23 + 62195757 CCACCCTCATGGCCTGTAGAGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434628 23 - 578057 CCACTCTCATGTCCTGTAGAGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959802 23 - 110113093 CCACCCTCATGTCCCATAGAGAC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250349 23 - 90373283 TCACCCTTGTGTCCTGTAGAGAC i chlSab2.chr2 C 0 I 138 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351498 38 + 96509753 T a score=6965.000000 s hg38.chr20_KI270870v1_alt 36759 7 + 183433 CCCCTCT s panTro5.chr20 66366664 7 + 66533130 CCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046429 7 + 62195757 CCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434651 7 - 578057 CCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959825 7 - 110113093 CCCCTCA i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250510 7 - 90373283 CACGTCA i chlSab2.chr2 I 138 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351498 38 + 96509753 T a score=22857.000000 s hg38.chr20_KI270870v1_alt 36766 16 + 183433 CTGTCCACCCTCATGT s panTro5.chr20 66366671 16 + 66533130 CTGTCCACCCTCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046436 16 + 62195757 CTGTCCACTCTCATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434658 16 - 578057 CTGTCCACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959832 16 - 110113093 CTGTCCACCCTCATGT i nomLeu3.chr13 C 0 T 204 s macFas5.chr10 96351460 16 + 96509753 CTGGCCCCTCTCATAT i macFas5.chr10 T 38 C 0 s chlSab2.chr2 90250517 16 - 90373283 CCGTCCAGCCTCGTGG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=11296.000000 s hg38.chr20_KI270870v1_alt 36782 7 + 183433 CCTATAA s panTro5.chr20 66366687 7 + 66533130 CCTGTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046452 7 + 62195757 CCTGTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434674 7 - 578057 CCTGTAG i gorGor5.CYUI01015848v1 C 0 T 60 s nomLeu3.chr13 109959644 7 - 110113093 CCCATAG i nomLeu3.chr13 T 204 C 0 s macFas5.chr10 96351476 7 + 96509753 CCTGTAG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250533 7 - 90373283 CCTGTAG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=11730.000000 s hg38.chr20_KI270870v1_alt 36789 8 + 183433 AGACCCCC s panTro5.chr20 66366694 8 + 66533130 AGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046459 8 + 62195757 AGACCCCC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959651 8 - 110113093 AGACCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351483 8 + 96509753 AGACCCCC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250540 8 - 90373283 AGACCCCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434681 60 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=54020.000000 s hg38.chr20_KI270870v1_alt 36797 37 + 183433 TCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCA s panTro5.chr20 66366702 37 + 66533130 TCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046467 37 + 62195757 TCACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 37 - 578057 TCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCA i gorGor5.CYUI01015848v1 T 60 C 0 s nomLeu3.chr13 109959659 37 - 110113093 TCAGTGTCCAGCCTCAGGACCTTCAGAGACCCCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351491 37 + 96509753 TCACTGTTCACCCTTGTGTCCTGTAGAGACCCCCCCC i macFas5.chr10 C 0 T 68 s chlSab2.chr2 90250548 37 - 90373283 TCAGTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=17595.000000 s hg38.chr20_KI270870v1_alt 36834 13 + 183433 CTGTCCACCCTCA s panTro5.chr20 66366739 13 + 66533130 CTCTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046504 13 + 62195757 CTGTCCACCCTCA i panPan2.chr20 C 0 T 204 s gorGor5.CYUI01015848v1 434658 13 - 578057 CTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959696 13 - 110113093 GTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351460 13 + 96509753 CTGGCCCCTCTCA i macFas5.chr10 T 68 C 0 s chlSab2.chr2 90250585 13 - 90373283 CCGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=172975.000000 s hg38.chr20_KI270870v1_alt 36847 112 + 183433 TGTCCTATAGAGACCCCCTCACTGTCCACCCTCGTGTCCTATAGAGA-CCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAG s panTro5.chr20 66366752 112 + 66533130 TGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGA-CCCCCTCACTCTCCACCCTCAGGACCTGTAGAGACCCCCTCACTGTCCAACCTCATGGCCTGTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046313 112 + 62195757 TGTCCTGTAGAGACCCCCTCACTGTCCACTCTCGTGTCCTGTAGAGA-CCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAG i panPan2.chr20 T 204 C 0 s gorGor5.CYUI01015848v1 434671 111 - 578057 TGTCCTGTAGAGACCCCCTCACTGTCTACCCTCATGTCCTGTAGAGA-CCCCCTCACTGTCCACCCTCATGTCCTAT-GAGACCCCCTCACTGTCCACCCTCATGTCCTGTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959709 112 - 110113093 TGTCCCATAGAGACCCCCTCAGTATCCACCCTCATGTCCCATAGAGA-CCCCCTCACTGTCCACCCTCATGTCCCATAGAGACCCCCTCAGTATCCACCCTCATGTCCCATAG i nomLeu3.chr13 C 0 I 201 s macFas5.chr10 96351473 113 + 96509753 TATCCTGTAGAGACCCCCTCACTGTTCACCCTTGTGTCCTGTAGAGACCCCCCCCAGTGTCCAGCCTCATGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTAG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250598 112 - 90373283 TGGCCTGTAGAGACCCCCTCAGTGTCCAGCCTCGTGACCTGTAGAGA-CCCCCTCAGTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGGCCTGTAG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=82179.000000 s hg38.chr20_KI270870v1_alt 36959 57 + 183433 AGACCCCCTCACTGTCCACCCTCGTGTCCTATAGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66366864 57 + 66533130 AGACCCCCTCACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046425 57 + 62195757 AGACCCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTCTCCACCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434782 57 - 578057 AGACCCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i gorGor5.CYUI01015848v1 C 0 T 34 s nomLeu3.chr13 109960022 56 - 110113093 agaccccctca-tgtccaccctcatgtcccATAGAGACCCCCTCACTGTCCACCCTC i nomLeu3.chr13 I 201 C 0 s macFas5.chr10 96351586 56 + 96509753 AGACCACATCACCATCCAGCCTCGT-GTCTGTAGAGACCACGTCACCGCCCAGCCTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250710 57 - 90373283 AGACCACGTCACCATCCAGCCTCGTGGCCTGTAGAGACCCCCTCAGTGTCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=50224.000000 s hg38.chr20_KI270870v1_alt 37016 35 + 183433 GTGTCCTATATAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366921 35 + 66533130 ATGTCCTATAGAGACCCCCTCACTGTCCACTCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046482 35 + 62195757 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 C 0 T 34 s gorGor5.CYUI01015848v1 434805 35 - 578057 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 T 34 T 203 s nomLeu3.chr13 109960078 35 - 110113093 ATGGCCTGCAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351642 35 + 96509753 GTGGCCTGGAGAGACCACGTCACCGCCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250767 35 - 90373283 GTGACCTGTAGAGACCACGTCACCGTCCCGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=49719.000000 s hg38.chr20_KI270870v1_alt 37051 34 + 183433 TGTCCTATAAAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366956 34 + 66533130 TGTCCTGTAGAGACCCCCTCACTCTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046483 34 + 62195757 TGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 T 34 T 68 s gorGor5.CYUI01015848v1 434637 34 - 578057 TGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 T 203 C 0 s nomLeu3.chr13 109960113 34 - 110113093 GGACCTGCAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351677 34 + 96509753 TGGCCTGGAGAGACCACGTCACCGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250802 34 - 90373283 TGGCCTGTAGAGACCACGTCACCGTCCCGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=13979.000000 s hg38.chr20_KI270870v1_alt 37085 9 + 183433 TGGCCTGTA s panTro5.chr20 66366990 9 + 66533130 TGGCCTGTA i panTro5.chr20 C 0 T 136 s panPan2.chr20 62046449 9 + 62195757 TGTCCTGTA i panPan2.chr20 T 68 C 0 s gorGor5.CYUI01015848v1 434671 9 - 578057 TGTCCTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960147 9 - 110113093 TGGCCTGCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351711 9 + 96509753 TGGCCTGTA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250836 9 - 90373283 TGGCCTTTA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=43962.000000 s hg38.chr20_KI270870v1_alt 37094 30 + 183433 GAGACCCCAACACTGTCCACCCTCATGGCC s panTro5.chr20 66366863 30 + 66533130 GAGACCCCCTCACTCTCCACCCTCATGTCC i panTro5.chr20 T 136 C 0 s panPan2.chr20 62046458 30 + 62195757 GAGACCCCCTCACTCTCCACCCTCATGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434680 30 - 578057 GAGACCCCCTCACTGTCTACCCTCATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960156 30 - 110113093 GAGACCCCCTCACTGTCCACCCTCCTGGCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351720 30 + 96509753 GAGACCACGTCACTGTCCAGCCTCGTGGCC i macFas5.chr10 C 0 T 134 s chlSab2.chr2 90250845 30 - 90373283 GAGACCACATCACCGTCCAGCCTCGTGGCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=36730.000000 s hg38.chr20_KI270870v1_alt 37124 29 + 183433 TGTAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366893 29 + 66533130 TGTAGAGACCCCCTCACTGTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046488 29 + 62195757 TGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 C 0 T 127 s gorGor5.CYUI01015848v1 434710 29 - 578057 TGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960186 29 - 110113093 TGCAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250875 29 - 90373283 TGTAGAGACCACGTCACCGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 134 + 96509753 T a score=1426.000000 s hg38.chr20_KI270870v1_alt 37153 2 + 183433 TG s panTro5.chr20 66366922 2 + 66533130 TG i panTro5.chr20 C 0 T 238 s gorGor5.CYUI01015848v1 434739 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960215 1 - 110113093 -G i nomLeu3.chr13 C 0 I 1 s chlSab2.chr2 90250904 2 - 90373283 TG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 127 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 134 + 96509753 T a score=786.000000 s hg38.chr20_KI270870v1_alt 37155 3 + 183433 TCC s gorGor5.CYUI01015848v1 434741 3 - 578057 TCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960217 3 - 110113093 ACC i nomLeu3.chr13 I 1 C 0 s chlSab2.chr2 90250906 3 - 90373283 GCC i chlSab2.chr2 C 0 I 2 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 127 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366924 238 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 134 + 96509753 T a score=-975.000000 s hg38.chr20_KI270870v1_alt 37158 3 + 183433 TAT s gorGor5.CYUI01015848v1 434744 3 - 578057 TAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960220 3 - 110113093 CAT i nomLeu3.chr13 C 0 I 1 s macFas5.chr10 96351616 2 + 96509753 TA- i macFas5.chr10 T 134 C 0 s chlSab2.chr2 90250911 2 - 90373283 TA- i chlSab2.chr2 I 2 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 127 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366924 238 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=46713.000000 s hg38.chr20_KI270870v1_alt 37161 40 + 183433 GAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACC s panPan2.chr20 62046390 40 + 62195757 GAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACC i panPan2.chr20 T 127 C 0 s gorGor5.CYUI01015848v1 434747 40 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960224 40 - 110113093 GAGACCCCCTCACTGTCCACCCTCCTGGCCTGCAGAGACC i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96351618 40 + 96509753 GAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250913 40 - 90373283 GAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACC i chlSab2.chr2 C 0 T 319 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366924 238 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=-96.000000 s hg38.chr20_KI270870v1_alt 37201 3 + 183433 CCC- s panPan2.chr20 62046430 3 + 62195757 CCC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434787 3 - 578057 CCC- i gorGor5.CYUI01015848v1 C 0 T 169 s nomLeu3.chr13 109960264 3 - 110113093 CCC- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351658 3 + 96509753 -ACG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250953 319 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366924 238 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=10073.000000 s hg38.chr20_KI270870v1_alt 37204 18 + 183433 TCACTGCCCCTTTTCTTA s panPan2.chr20 62046433 18 + 62195757 TCACTGTCCACTCTCATG i panPan2.chr20 C 0 T 68 s gorGor5.CYUI01015848v1 434621 18 - 578057 TCACTGTCCACTCTCATG i gorGor5.CYUI01015848v1 T 169 C 0 s nomLeu3.chr13 109960267 18 - 110113093 TCACTGTCCACCCTCAGG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351661 18 + 96509753 TCACCGCCCAGCCTCGTG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250953 319 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366924 238 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=100571.000000 s hg38.chr20_KI270870v1_alt 37222 69 + 183433 TCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGT s panTro5.chr20 66366686 69 + 66533130 GCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTCTCCACCCTCATGT i panTro5.chr20 T 238 I 238 s panPan2.chr20 62046383 69 + 62195757 GCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCATGT i panPan2.chr20 T 68 T 96 s gorGor5.CYUI01015848v1 434639 69 - 578057 TCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCTACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960285 67 - 110113093 ACCCATAGAGACCCCCTCA-TGTCCACCCTCAGGACCTGCAGAGACCCCCTCA-TGTCCACCCTCAGGA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351679 69 + 96509753 GCCTGGAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250634 69 - 90373283 ACCTGTAGAGACCCCCTCAGTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGG i chlSab2.chr2 T 319 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=3000.000000 s hg38.chr20_KI270870v1_alt 37291 2 + 183433 CC s panTro5.chr20 66366993 2 + 66533130 CC i panTro5.chr20 I 238 C 0 s gorGor5.CYUI01015848v1 434708 2 - 578057 CC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960352 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351748 2 + 96509753 CC i macFas5.chr10 C 0 T 290 s chlSab2.chr2 90250703 2 - 90373283 CC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046452 96 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1537.000000 s hg38.chr20_KI270870v1_alt 37293 3 + 183433 TAT s panTro5.chr20 66366995 3 + 66533130 TGT i panTro5.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 434710 3 - 578057 TGT i gorGor5.CYUI01015848v1 C 0 T 133 s nomLeu3.chr13 109960354 3 - 110113093 CAT i nomLeu3.chr13 C 0 I 1 s chlSab2.chr2 90250705 3 - 90373283 TGT i chlSab2.chr2 C 0 T 237 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046452 96 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 290 + 96509753 T a score=22846.000000 s hg38.chr20_KI270870v1_alt 37296 33 + 183433 GAGACCCCCTCACTGTCCACCCTCATGTCCTAT s panTro5.chr20 66366999 33 + 66533130 GAGACCCCCTCACTGTCCACTCTCATGGCCTAT i panTro5.chr20 I 1 T 33 s gorGor5.CYUI01015848v1 434580 33 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTAT i gorGor5.CYUI01015848v1 T 133 C 0 s nomLeu3.chr13 109960358 32 - 110113093 GAGACCCCCTCA-TGCCCACCCTCAGGACCCAT i nomLeu3.chr13 I 1 I 1 s chlSab2.chr2 90250471 33 - 90373283 GAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGT i chlSab2.chr2 T 237 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046452 96 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 290 + 96509753 T a score=10660.000000 s hg38.chr20_KI270870v1_alt 37329 8 + 183433 GAGACCCC s panTro5.chr20 66366999 8 + 66533130 GAGACCCC i panTro5.chr20 T 33 C 0 s panPan2.chr20 62046356 8 + 62195757 GAGACCCC i panPan2.chr20 T 96 C 0 s gorGor5.CYUI01015848v1 434613 8 - 578057 GAGACCCC i gorGor5.CYUI01015848v1 C 0 I 134 s nomLeu3.chr13 109960391 8 - 110113093 GAGACCCC i nomLeu3.chr13 I 1 C 0 s chlSab2.chr2 90250505 8 - 90373283 GAGACCAC i chlSab2.chr2 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 290 + 96509753 T a score=4605.000000 s hg38.chr20_KI270870v1_alt 37337 4 + 183433 CTCA s panTro5.chr20 66367007 4 + 66533130 CTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046364 4 + 62195757 CTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434755 4 - 578057 CTCA i gorGor5.CYUI01015848v1 I 134 C 0 s nomLeu3.chr13 109960399 4 - 110113093 CTCA i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250513 4 - 90373283 GTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 290 + 96509753 T a score=49312.000000 s hg38.chr20_KI270870v1_alt 37341 31 + 183433 CTGTCCACCCTCATGGCCTATAGAGACCCCC s panTro5.chr20 66367011 31 + 66533130 CTGTCCACTCTCATGGCCTATAGAGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046368 31 + 62195757 CTCTCCACCCTCATGGCCTGTAGAGACCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434759 31 - 578057 CTGTCCACCCTCATGTCCTGTAGAGACCCCC i gorGor5.CYUI01015848v1 C 0 T 169 s nomLeu3.chr13 109960403 30 - 110113093 -TGTCCACCCTCATGGCCTGCAGAGACCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351460 31 + 96509753 CTGGCCCCTCTCATATCCTGTAGAGACCCCC i macFas5.chr10 T 290 C 0 s chlSab2.chr2 90250517 31 - 90373283 CCGTCCAGCCTCGTGGCCTGTAGAGACCCCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=35973.000000 s hg38.chr20_KI270870v1_alt 37372 25 + 183433 TCACTGTCCACTCTCATGTCCTATA s panTro5.chr20 66367042 25 + 66533130 TCACTCTCCACCCTCATGGCCTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046399 25 + 62195757 TCACTGTCCACCCTCATGGCCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 25 - 578057 TCACTGTCCACTCTCATGTCCTGTA i gorGor5.CYUI01015848v1 T 169 T 100 s nomLeu3.chr13 109960433 25 - 110113093 TCACTGTCCACCCTCAGGACCCATA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351491 25 + 96509753 TCACTGTTCACCCTTGTGTCCTGTA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250548 25 - 90373283 TCAGTGTCCAGCCTCGTGGCCTGTA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=34336.000000 s hg38.chr20_KI270870v1_alt 37397 24 + 183433 GAGA-CCCCCTCACTGTCCACCCTC s panTro5.chr20 66367067 24 + 66533130 GAGA-CCCCCTCACTGTCCACCCTC i panTro5.chr20 C 0 T 340 s panPan2.chr20 62046424 24 + 62195757 GAGA-CCCCCTCACTGTCCACTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434546 24 - 578057 GAGA-CCCCCTCACTGTCCACTCTC i gorGor5.CYUI01015848v1 T 100 C 0 s nomLeu3.chr13 109960458 23 - 110113093 GAGA-CCCCCTCA-TGTCCACCCTC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351516 25 + 96509753 GAGACCCCCCCCAGTGTCCAGCCTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250573 24 - 90373283 GAGA-CCACGTCACCGTCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=12371.000000 s hg38.chr20_KI270870v1_alt 37421 10 + 183433 GTGTCCTATA s panTro5.chr20 66366751 10 + 66533130 ATGTCCTGTA i panTro5.chr20 T 340 I 170 s panPan2.chr20 62046448 10 + 62195757 ATGTCCTGTA i panPan2.chr20 C 0 T 184 s gorGor5.CYUI01015848v1 434570 10 - 578057 ATGTCCTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960481 10 - 110113093 AGGACCCATA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351541 10 + 96509753 ATGTTCTGTA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250597 10 - 90373283 GTGGCCTGTA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=16805.000000 s hg38.chr20_KI270870v1_alt 37431 12 + 183433 GAGACCCCCTCA s panTro5.chr20 66366931 12 + 66533130 GAGACCCCCTCA i panTro5.chr20 I 170 C 0 s gorGor5.CYUI01015848v1 434580 12 - 578057 GAGACCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960491 12 - 110113093 GAGACCCCCTCA i nomLeu3.chr13 C 0 T 590 s macFas5.chr10 96351551 12 + 96509753 GAGATCCCCTCA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250607 12 - 90373283 GAGACCCCCTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046458 184 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=4524.000000 s hg38.chr20_KI270870v1_alt 37443 7 + 183433 CTGTCAA s panTro5.chr20 66366943 7 + 66533130 CTGTCCA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434592 7 - 578057 CTGTCCA i gorGor5.CYUI01015848v1 C 0 T 67 s macFas5.chr10 96351563 7 + 96509753 GTGTCCA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250619 7 - 90373283 GTGTCCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046458 184 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960503 590 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=4861.000000 s hg38.chr20_KI270870v1_alt 37450 6 + 183433 CTCTCA s panTro5.chr20 66366950 6 + 66533130 CTCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046274 6 + 62195757 CTCTCA i panPan2.chr20 T 184 C 0 s gorGor5.CYUI01015848v1 434532 6 - 578057 CTCTCA i gorGor5.CYUI01015848v1 T 67 C 0 s macFas5.chr10 96351570 6 + 96509753 GCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250626 6 - 90373283 GCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960503 590 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=12402.000000 s hg38.chr20_KI270870v1_alt 37456 8 + 183433 TGTCCTAT s panTro5.chr20 66366956 8 + 66533130 TGTCCTGT i panTro5.chr20 C 0 I 1 s panPan2.chr20 62046280 8 + 62195757 TGTCCTAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434538 8 - 578057 TGTCCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959913 8 - 110113093 TGTCCCAT i nomLeu3.chr13 T 590 I 1 s macFas5.chr10 96351576 8 + 96509753 TGTCCTGT i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250632 8 - 90373283 TGACCTGT i chlSab2.chr2 C 0 T 268 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=845.000000 s hg38.chr20_KI270870v1_alt 37464 1 + 183433 G s panTro5.chr20 66366965 1 + 66533130 G i panTro5.chr20 I 1 C 0 s panPan2.chr20 62046288 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434546 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959922 1 - 110113093 G i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96351584 1 + 96509753 A i macFas5.chr10 C 0 T 34 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250640 268 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=17657.000000 s hg38.chr20_KI270870v1_alt 37465 20 + 183433 AGACCCCCTCACTGTCCACT s panTro5.chr20 66366966 20 + 66533130 AGACCCCCTCACTCTCCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046289 20 + 62195757 AGACCCCCTCACTGTCCACT i panPan2.chr20 C 0 I 149 s gorGor5.CYUI01015848v1 434547 20 - 578057 AGACCCCCTCACTGTCCACT i gorGor5.CYUI01015848v1 C 0 T 33 s nomLeu3.chr13 109959923 20 - 110113093 AGACCCCCTCACTGTCCACC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250640 268 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351585 34 + 96509753 T a score=5475.000000 s hg38.chr20_KI270870v1_alt 37485 12 + 183433 CTCATGTCCTAT s panTro5.chr20 66366986 12 + 66533130 CTCATGGCCTGT i panTro5.chr20 C 0 T 237 s gorGor5.CYUI01015848v1 434534 12 - 578057 CTCATGTCCTAT i gorGor5.CYUI01015848v1 T 33 C 0 s nomLeu3.chr13 109959943 12 - 110113093 CTCATGTCCCAT i nomLeu3.chr13 C 0 I 548 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250640 268 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046309 149 + 62195757 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351585 34 + 96509753 T a score=3820.000000 s hg38.chr20_KI270870v1_alt 37497 4 + 183433 GAGA s panTro5.chr20 66366761 4 + 66533130 GAGA i panTro5.chr20 T 237 C 0 s panPan2.chr20 62046458 4 + 62195757 GAGA i panPan2.chr20 I 149 C 0 s gorGor5.CYUI01015848v1 434546 4 - 578057 GAGA i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351551 4 + 96509753 GAGA i macFas5.chr10 T 34 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250640 268 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959955 548 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=10165.000000 s hg38.chr20_KI270870v1_alt 37501 9 + 183433 CCCCCTCAC s panTro5.chr20 66366765 9 + 66533130 CCCCCTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046462 9 + 62195757 CCCCCTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434550 9 - 578057 CCCCCTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351555 9 + 96509753 TCCCCTCAG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250372 9 - 90373283 CCCCCCCAG i chlSab2.chr2 T 268 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959955 548 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=53132.000000 s hg38.chr20_KI270870v1_alt 37510 42 + 183433 TGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACC s panTro5.chr20 66366774 42 + 66533130 TGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTCTCCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046471 42 + 62195757 TCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACC i panPan2.chr20 C 0 T 237 s gorGor5.CYUI01015848v1 434559 42 - 578057 TGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960503 41 - 110113093 TGCCCACCCTCAGGACCCATAGAGACCCCCTCA-TGTCCACC i nomLeu3.chr13 I 548 C 0 s macFas5.chr10 96351564 42 + 96509753 TGTCCAGCCTCGTGTCCTGTAGAGACCACATCACCATCCAGC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250381 33 - 90373283 TGTCCACCCTCATGTTCTGTAGCGATCCTCTCA--------- i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=5120.000000 s hg38.chr20_KI270870v1_alt 37552 4 + 183433 CTCA s panTro5.chr20 66366816 4 + 66533130 CTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046276 4 + 62195757 CTCA i panPan2.chr20 T 237 C 0 s gorGor5.CYUI01015848v1 434601 4 - 578057 CTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960544 4 - 110113093 CTCA i nomLeu3.chr13 C 0 T 503 s macFas5.chr10 96351606 4 + 96509753 CTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250414 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2853.000000 s hg38.chr20_KI270870v1_alt 37556 8 + 183433 TGTCCTAT- s panTro5.chr20 66366820 8 + 66533130 GGACCTGT- i panTro5.chr20 C 0 T 339 s panPan2.chr20 62046280 8 + 62195757 TGTCCTAT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434605 8 - 578057 TGTCCTAT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960045 8 - 110113093 tgtcccAT- i nomLeu3.chr13 T 503 I 1 s macFas5.chr10 96351610 8 + 96509753 TGT-CTGTA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250414 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=12615.000000 s hg38.chr20_KI270870v1_alt 37564 12 + 183433 GAGACCCCCTCA s panTro5.chr20 66366489 12 + 66533130 GAGACCCCCTCA i panTro5.chr20 T 339 C 0 s panPan2.chr20 62046288 12 + 62195757 GAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434613 11 - 578057 GAGA-CCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960054 12 - 110113093 GAGACCCCCTCA i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96351618 12 + 96509753 GAGACCACGTCA i macFas5.chr10 C 0 T 170 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250414 0 - 90373283 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=108745.000000 s hg38.chr20_KI270870v1_alt 37576 68 + 183433 CTGTCCACCCTCATGGCCTGTAGAGA-CCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCA s panTro5.chr20 66366501 68 + 66533130 CTCTCCACCCTCATGGCCTGTAGAGA-CCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046300 68 + 62195757 CTGTCCACTCTCGTGTCCTGTAGAGA-CCCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434624 68 - 578057 CTGTCCACTCTCATGTCCTGTAGAGA-CCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960066 68 - 110113093 CTGTCCACCCTCATGGCCTGCAGAGA-CCCCCTCACTGTCCACCCTCAGGACCTGCAGAGACCCCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351460 68 + 96509753 CTGGCCCCTCTCATATCCTGTAGAGA-CCCCCTCACTGTTCACCCTTGTGTCCTGTAGAGACCCCCCCC i macFas5.chr10 T 170 T 68 s chlSab2.chr2 90250414 69 - 90373283 GTGTCCAGCCTCATGGCCTGTAGAGACCCCCCTCAGTGTCCACCCTCATGTTCTGTAGAGATCCCCTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=154479.000000 s hg38.chr20_KI270870v1_alt 37644 103 + 183433 CTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCGTGTCCTATAGAGA-CCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCAC s panTro5.chr20 66366569 103 + 66533130 CTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGA-CCCCCTCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046368 103 + 62195757 CTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGA-CCCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434692 102 - 578057 CTGTCTACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTAT-GAGA-CCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960134 103 - 110113093 CTGTCCACCCTCATGGCCTGCAGAGACCCCCTCACTGTCCACCCTCCTGGCCTGCAGAGA-CCCCCTCACTGTCCACCCTCAGGACCCATAGAGACCCCCTCAC i nomLeu3.chr13 C 0 I 67 s macFas5.chr10 96351460 104 + 96509753 CTGGCCCCTCTCATATCCTGTAGAGACCCCCTCACTGTTCACCCTTGTGTCCTGTAGAGACCCCCCCCAGTGTCCAGCCTCATGTTCTGTAGAGATCCCCTCAG i macFas5.chr10 T 68 C 0 s chlSab2.chr2 90250483 103 - 90373283 GTGTCCAGCCTCGTGTCCTGTAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGA-CCCCCTCAGTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCAC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=19792.000000 s hg38.chr20_KI270870v1_alt 37747 15 + 183433 TGTCCACCCTCATGG s panTro5.chr20 66366672 15 + 66533130 TGTCCACCCTCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046471 15 + 62195757 TCTCCACCCTCATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434794 15 - 578057 TGTCCACTCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960304 15 - 110113093 TGTCCACCCTCAGGA i nomLeu3.chr13 I 67 C 0 s macFas5.chr10 96351564 15 + 96509753 TGTCCAGCCTCGTGT i macFas5.chr10 C 0 T 103 s chlSab2.chr2 90250586 15 - 90373283 CGTCCAGCCTCGTGG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=52962.000000 s hg38.chr20_KI270870v1_alt 37762 30 + 183433 CCTGTAGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66366687 30 + 66533130 CCTGTAGAGACCCCCTCACTGTCCACCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046486 30 + 62195757 CCTGTAGAGACCCCCTCACTGTCCACCCTC i panPan2.chr20 C 0 T 102 s gorGor5.CYUI01015848v1 434809 30 - 578057 CCTGTAGAGACCCCCTCACTGTCCACCCTC i gorGor5.CYUI01015848v1 C 0 T 34 s nomLeu3.chr13 109960319 29 - 110113093 CCTGCAGAGACCCCCTCA-TGTCCACCCTC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351476 30 + 96509753 CCTGTAGAGACCCCCTCACTGTTCACCCTT i macFas5.chr10 T 103 C 0 s chlSab2.chr2 90250601 30 - 90373283 CCTGTAGAGACCCCCTCAGTGTCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=33287.000000 s hg38.chr20_KI270870v1_alt 37792 22 + 183433 GTGTCCTATAGAGA-CCCCCTCA s panTro5.chr20 66366717 22 + 66533130 ATGGCCTGTAGAGA-CCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046414 22 + 62195757 ATGGCCTGTAGAGA-CCCCCTCA i panPan2.chr20 T 102 C 0 s gorGor5.CYUI01015848v1 434805 22 - 578057 ATGTCCTGTAGAGA-CCCCCTCA i gorGor5.CYUI01015848v1 T 34 C 0 s nomLeu3.chr13 109960348 22 - 110113093 AGGACCCATAGAGA-CCCCCTCA i nomLeu3.chr13 C 0 T 66 s macFas5.chr10 96351506 23 + 96509753 GTGTCCTGTAGAGACCCCCCCCA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250631 22 - 90373283 GTGACCTGTAGAGA-CCCCCTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=-2980.000000 s hg38.chr20_KI270870v1_alt 37814 1 + 183433 -C s panTro5.chr20 66366739 1 + 66533130 -C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046436 1 + 62195757 -C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434827 1 - 578057 -C i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351529 1 + 96509753 G- i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250653 1 - 90373283 G- i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960370 66 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=17958.000000 s hg38.chr20_KI270870v1_alt 37815 11 + 183433 TGTCCACCCTC s panTro5.chr20 66366740 11 + 66533130 TCTCCACCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046437 11 + 62195757 TGTCCACTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434828 11 - 578057 TGTCCACCCTC i gorGor5.CYUI01015848v1 C 0 T 203 s nomLeu3.chr13 109960304 11 - 110113093 TGTCCACCCTC i nomLeu3.chr13 T 66 C 0 s macFas5.chr10 96351530 11 + 96509753 TGTCCAGCCTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250654 11 - 90373283 TGTCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=96753.000000 s hg38.chr20_KI270870v1_alt 37826 68 + 183433 GTGTCCTATAGAGACCCCCTCACTGTCCACCCTCGTGTCCTATAGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66366751 68 + 66533130 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTCTCCACCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046448 68 + 62195757 ATGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i panPan2.chr20 C 0 T 34 s gorGor5.CYUI01015848v1 434636 68 - 578057 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCTACCCTC i gorGor5.CYUI01015848v1 T 203 C 0 s nomLeu3.chr13 109960315 66 - 110113093 AGGACCTGCAGAGACCCCCTCA-TGTCCACCCTCAGGACCCATAGAGACCCCCTCA-TGCCCACCCTC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351541 68 + 96509753 ATGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACATCACCATCCAGCCTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250665 68 - 90373283 GTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACCATCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1579.000000 s hg38.chr20_KI270870v1_alt 37894 4 + 183433 GTGT s panTro5.chr20 66366819 4 + 66533130 AGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046482 4 + 62195757 ATGT i panPan2.chr20 T 34 C 0 s gorGor5.CYUI01015848v1 434704 4 - 578057 ATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960381 4 - 110113093 AGGA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351609 4 + 96509753 GTGT i macFas5.chr10 C 0 I 101 s chlSab2.chr2 90250733 4 - 90373283 GTGG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=49713.000000 s hg38.chr20_KI270870v1_alt 37898 31 + 183433 CCTATAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366823 31 + 66533130 CCTGTAGAGACCCCCTCACTGTCCAACCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046486 31 + 62195757 CCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 C 0 T 127 s gorGor5.CYUI01015848v1 434708 31 - 578057 CCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960385 30 - 110113093 CCCATAGAGACCCCCTCA-TGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351714 31 + 96509753 CCTGTAGAGACCACGTCACTGTCCAGCCTCG i macFas5.chr10 I 101 C 0 s chlSab2.chr2 90250737 31 - 90373283 CCTGTAGAGACCCCCTCAGTGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2762.000000 s hg38.chr20_KI270870v1_alt 37929 3 + 183433 TGG s panTro5.chr20 66366854 3 + 66533130 TGG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434739 3 - 578057 TGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960415 3 - 110113093 TGG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351745 3 + 96509753 TGG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250768 3 - 90373283 TGA i chlSab2.chr2 C 0 T 207 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 127 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2000.000000 s hg38.chr20_KI270870v1_alt 37932 2 + 183433 CC s panTro5.chr20 66366857 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434742 2 - 578057 CC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960418 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351748 2 + 96509753 CC i macFas5.chr10 C 0 T 205 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 127 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=793.000000 s hg38.chr20_KI270870v1_alt 37934 3 + 183433 TAT s panTro5.chr20 66366859 3 + 66533130 TGT i panTro5.chr20 C 0 I 137 s gorGor5.CYUI01015848v1 434744 3 - 578057 TAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960420 3 - 110113093 TGC i nomLeu3.chr13 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 127 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 205 + 96509753 T a score=27702.000000 s hg38.chr20_KI270870v1_alt 37937 33 + 183433 GAGACCCCCTCACTGTCCACCCTCATGTCCTAT s panTro5.chr20 66366999 33 + 66533130 GAGACCCCCTCACTGTCCACTCTCATGGCCTAT i panTro5.chr20 I 137 T 169 s panPan2.chr20 62046390 33 + 62195757 GAGACCCCCTCACTGTCCACCCTCATGGCCTGT i panPan2.chr20 T 127 T 67 s gorGor5.CYUI01015848v1 434747 33 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTGT i gorGor5.CYUI01015848v1 C 0 T 134 s nomLeu3.chr13 109960424 33 - 110113093 GAGACCCCCTCACTGTCCACCCTCAGGACCCAT i nomLeu3.chr13 I 1 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 205 + 96509753 T a score=11640.000000 s hg38.chr20_KI270870v1_alt 37970 12 + 183433 GAGACCCCCTCA s panTro5.chr20 66366863 12 + 66533130 GAGACCCCCTCA i panTro5.chr20 T 169 C 0 s panPan2.chr20 62046356 12 + 62195757 GAGACCCCCTCA i panPan2.chr20 T 67 C 0 s gorGor5.CYUI01015848v1 434646 12 - 578057 GAGACCCCCTCA i gorGor5.CYUI01015848v1 T 134 C 0 s nomLeu3.chr13 109960458 12 - 110113093 GAGACCCCCTCA i nomLeu3.chr13 I 1 T 231 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 205 + 96509753 T a score=1071.000000 s hg38.chr20_KI270870v1_alt 37982 3 + 183433 CTC s panTro5.chr20 66366875 3 + 66533130 CTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046368 3 + 62195757 CTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434658 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960470 231 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 205 + 96509753 T a score=10437.000000 s hg38.chr20_KI270870v1_alt 37985 13 + 183433 TCCACCCTCATGG s panTro5.chr20 66366878 13 + 66533130 TCCACCCTCATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046371 13 + 62195757 TCCACCCTCATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434661 13 - 578057 TCCACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960239 13 - 110113093 TCCACCCTCCTGG i nomLeu3.chr13 T 231 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 205 + 96509753 T a score=7330.000000 s hg38.chr20_KI270870v1_alt 37998 6 + 183433 CCTGTA s panTro5.chr20 66366891 6 + 66533130 CCTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046384 6 + 62195757 CCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434674 6 - 578057 CCTGTA i gorGor5.CYUI01015848v1 C 0 T 134 s nomLeu3.chr13 109960252 6 - 110113093 CCTGCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351545 6 + 96509753 TCTGTA i macFas5.chr10 T 205 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=39899.000000 s hg38.chr20_KI270870v1_alt 38004 34 + 183433 GAGACCCCCTCACTGTCCACTCTCATGTCCTATA s panTro5.chr20 66366897 34 + 66533130 GAGACCCCCTCACTGTCCACCCTCATGTCCTATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046390 34 + 62195757 GAGACCCCCTCACTGTCCACCCTCATGGCCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434546 34 - 578057 GAGACCCCCTCACTGTCCACTCTCATGTCCTGTA i gorGor5.CYUI01015848v1 T 134 I 235 s nomLeu3.chr13 109960258 34 - 110113093 GAGACCCCCTCACTGTCCACCCTCAGGACCCATA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351551 34 + 96509753 GAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=15320.000000 s hg38.chr20_KI270870v1_alt 38038 12 + 183433 GAGACCCCCTCA s panTro5.chr20 66366931 12 + 66533130 GAGACCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046424 12 + 62195757 GAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434815 12 - 578057 GAGACCCCCTCA i gorGor5.CYUI01015848v1 I 235 C 0 s nomLeu3.chr13 109960292 12 - 110113093 GAGACCCCCTCA i nomLeu3.chr13 C 0 T 552 s macFas5.chr10 96351585 12 + 96509753 GAGACCACATCA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=8481.000000 s hg38.chr20_KI270870v1_alt 38050 13 + 183433 CTGTCAACTCTCA s panTro5.chr20 66366943 13 + 66533130 CTGTCCACTCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046436 13 + 62195757 CTGTCCACTCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434827 13 - 578057 CTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 T 306 s macFas5.chr10 96351597 13 + 96509753 CCATCCAGCCTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960304 552 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1311.000000 s hg38.chr20_KI270870v1_alt 38063 8 + 183433 TGTCCTAT- s panTro5.chr20 66366956 8 + 66533130 TGTCCTGT- i panTro5.chr20 C 0 T 67 s panPan2.chr20 62046449 8 + 62195757 TGTCCTGT- i panPan2.chr20 C 0 T 181 s macFas5.chr10 96351610 8 + 96509753 TGT-CTGTA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434840 306 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960304 552 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=4295.000000 s hg38.chr20_KI270870v1_alt 38071 21 + 183433 GAGACCCCCTCACTGTCCACC s nomLeu3.chr13 109959752 21 - 110113093 GAGACCCCCTCACTGTCCACC i nomLeu3.chr13 T 552 C 0 s macFas5.chr10 96351618 21 + 96509753 GAGACCACGTCACCGCCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046457 181 + 62195757 T e gorGor5.CYUI01015848v1 434840 306 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366964 67 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=7754.000000 s hg38.chr20_KI270870v1_alt 38092 10 + 183433 CTCATGTCCT s panPan2.chr20 62046276 10 + 62195757 CTCATGTCCT i panPan2.chr20 T 181 C 0 s gorGor5.CYUI01015848v1 434534 10 - 578057 CTCATGTCCT i gorGor5.CYUI01015848v1 T 306 C 0 s nomLeu3.chr13 109959773 10 - 110113093 CTCATGTCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351639 10 + 96509753 CTCGTGGCCT i macFas5.chr10 C 0 T 189 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366964 67 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1092.000000 s hg38.chr20_KI270870v1_alt 38102 2 + 183433 AT s panPan2.chr20 62046286 2 + 62195757 AT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434544 2 - 578057 AT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959783 2 - 110113093 AT i nomLeu3.chr13 C 0 I 69 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366964 67 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351649 189 + 96509753 T a score=11640.000000 s hg38.chr20_KI270870v1_alt 38104 12 + 183433 GAGACCCCCTCA s panTro5.chr20 66366897 12 + 66533130 GAGACCCCCTCA i panTro5.chr20 T 67 C 0 s panPan2.chr20 62046288 12 + 62195757 GAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434546 12 - 578057 GAGACCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959854 12 - 110113093 GAGACCCCCTCA i nomLeu3.chr13 I 69 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351649 189 + 96509753 T a score=62643.000000 s hg38.chr20_KI270870v1_alt 38116 50 + 183433 CTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGT s panTro5.chr20 66366909 50 + 66533130 CTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACTCTCATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046300 50 + 62195757 CTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTGTCCACTCTCGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434558 50 - 578057 CTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959866 50 - 110113093 CTGTCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351460 50 + 96509753 CTGGCCCCTCTCATATCCTGTAGAGACCCCCTCACTGTTCACCCTTGTGT i macFas5.chr10 T 189 I 35 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=7595.000000 s hg38.chr20_KI270870v1_alt 38166 9 + 183433 CCTAT-GAGA s panTro5.chr20 66366959 10 + 66533130 CCTGTAGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046350 10 + 62195757 CCTGTAGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434608 9 - 578057 CCTAT-GAGA i gorGor5.CYUI01015848v1 C 0 I 97 s nomLeu3.chr13 109959916 10 - 110113093 CCCATAGAGA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351545 10 + 96509753 TCTGTAGAGA i macFas5.chr10 I 35 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=21362.000000 s hg38.chr20_KI270870v1_alt 38175 29 + 183433 CCCCCTCACTGTCCACCCTCATGGCCTAT s panTro5.chr20 66366969 29 + 66533130 CCCCCTCACTCTCCACCCTCATGGCCTGT i panTro5.chr20 C 0 T 33 s panPan2.chr20 62046360 29 + 62195757 CCCCCTCACTCTCCACCCTCATGGCCTGT i panPan2.chr20 C 0 I 1 s nomLeu3.chr13 109959926 29 - 110113093 CCCCCTCACTGTCCACCCTCATGTCCCAT i nomLeu3.chr13 C 0 I 235 s macFas5.chr10 96351555 29 + 96509753 TCCCCTCAGTGTCCAGCCTCGTGTCCTGT i macFas5.chr10 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434617 97 - 578057 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=32203.000000 s hg38.chr20_KI270870v1_alt 38204 33 + 183433 GAGACCCCCTCACTGTCCACCCTCATGGCCTAT- s panTro5.chr20 66366965 33 + 66533130 GAGACCCCCTCACTCTCCACCCTCATGGCCTGT- i panTro5.chr20 T 33 T 339 s panPan2.chr20 62046390 33 + 62195757 GAGACCCCCTCACTGTCCACCCTCATGGCCTGT- i panPan2.chr20 I 1 T 33 s gorGor5.CYUI01015848v1 434714 33 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTAT- i gorGor5.CYUI01015848v1 I 97 C 0 s nomLeu3.chr13 109960190 33 - 110113093 GAGACCCCCTCACTGTCCACCCTCAGGACCCAT- i nomLeu3.chr13 I 235 T 539 s macFas5.chr10 96351585 33 + 96509753 GAGACCACATCACCATCCAGCCTCGTG-TCTGTA i macFas5.chr10 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=11035.000000 s hg38.chr20_KI270870v1_alt 38237 9 + 183433 GAGACCCCC s panTro5.chr20 66366659 9 + 66533130 GAGACCCCC i panTro5.chr20 T 339 C 0 s panPan2.chr20 62046390 9 + 62195757 GAGACCCCC i panPan2.chr20 T 33 C 0 s gorGor5.CYUI01015848v1 434747 9 - 578057 GAGACCCCC i gorGor5.CYUI01015848v1 C 0 T 135 s nomLeu3.chr13 109959684 9 - 110113093 GAGACCCCC i nomLeu3.chr13 T 539 C 0 s macFas5.chr10 96351618 9 + 96509753 GAGACCACG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=42132.000000 s hg38.chr20_KI270870v1_alt 38246 37 + 183433 TCACTGTCCACCCTCATGGCCTATAGAGACCCCCTCA s panTro5.chr20 66366668 37 + 66533130 TCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046399 37 + 62195757 TCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 37 - 578057 TCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCA i gorGor5.CYUI01015848v1 T 135 C 0 s nomLeu3.chr13 109959693 37 - 110113093 TCAGTGTCCACCCTCATGTCCCATAGAGACCCCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351627 37 + 96509753 TCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCA i macFas5.chr10 C 0 T 204 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=65978.000000 s hg38.chr20_KI270870v1_alt 38283 56 + 183433 CTGTCCACTCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCGTGTCCTATA s panTro5.chr20 66366705 56 + 66533130 CTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTGTA i panTro5.chr20 C 0 I 170 s panPan2.chr20 62046436 56 + 62195757 CTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434658 56 - 578057 CTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCTACCCTCATGTCCTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959730 56 - 110113093 GTATCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGTCCCATA i nomLeu3.chr13 C 0 I 68 s macFas5.chr10 96351460 56 + 96509753 CTGGCCCCTCTCATATCCTGTAGAGACCCCCTCACTGTTCACCCTTGTGTCCTGTA i macFas5.chr10 T 204 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=15485.000000 s hg38.chr20_KI270870v1_alt 38339 11 + 183433 GAGACCCCCTC s panTro5.chr20 66366931 11 + 66533130 GAGACCCCCTC i panTro5.chr20 I 170 C 0 s panPan2.chr20 62046492 11 + 62195757 GAGACCCCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434714 11 - 578057 GAGACCCCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959854 11 - 110113093 GAGACCCCCTC i nomLeu3.chr13 I 68 C 0 s macFas5.chr10 96351516 11 + 96509753 GAGACCCCCCC i macFas5.chr10 C 0 I 69 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=15063.000000 s hg38.chr20_KI270870v1_alt 38350 14 + 183433 ACTGTCAACTCTCA s panTro5.chr20 66366942 14 + 66533130 ACTGTCCACTCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046503 14 + 62195757 ACTGTCCACCCTCA i panPan2.chr20 C 0 T 243 s gorGor5.CYUI01015848v1 434725 14 - 578057 ACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959865 14 - 110113093 ACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351596 14 + 96509753 ACCATCCAGCCTCG i macFas5.chr10 I 69 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=16650.000000 s hg38.chr20_KI270870v1_alt 38364 27 + 183433 TGTCCTAT-GAGACCCCCTCACTGTCCA s panTro5.chr20 66366956 28 + 66533130 TGTCCTGTAGAGACCCCCTCACTCTCCA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434739 27 - 578057 TGTCCTAT-GAGACCCCCTCACTGTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959879 28 - 110113093 TGTCCCATAGAGACCCCCTCACTGTCCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351610 27 + 96509753 TGT-CTGTAGAGACCACGTCACCGCCCA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 243 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=12292.000000 s hg38.chr20_KI270870v1_alt 38391 12 + 183433 CTCTCATGTCCT s panTro5.chr20 66366984 12 + 66533130 CCCTCATGGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046274 12 + 62195757 CTCTCATGTCCT i panPan2.chr20 T 243 C 0 s gorGor5.CYUI01015848v1 434766 12 - 578057 CCCTCATGTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959907 12 - 110113093 CCCTCATGTCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351637 12 + 96509753 GCCTCGTGGCCT i macFas5.chr10 C 0 T 98 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1097.000000 s hg38.chr20_KI270870v1_alt 38403 2 + 183433 AT s panTro5.chr20 66366996 2 + 66533130 GT i panTro5.chr20 C 0 T 203 s panPan2.chr20 62046286 2 + 62195757 AT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434778 2 - 578057 GT i gorGor5.CYUI01015848v1 C 0 T 159 s nomLeu3.chr13 109959919 2 - 110113093 AT i nomLeu3.chr13 C 0 T 135 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351649 98 + 96509753 T a score=8296.000000 s hg38.chr20_KI270870v1_alt 38405 9 + 183433 GAGACCCCC s panTro5.chr20 66366795 9 + 66533130 GAGACCCCC i panTro5.chr20 T 203 C 0 s panPan2.chr20 62046288 9 + 62195757 GAGACCCCC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959786 9 - 110113093 GAGACCCCC i nomLeu3.chr13 T 135 C 0 s macFas5.chr10 96351551 9 + 96509753 GAGATCCCC i macFas5.chr10 T 98 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434780 159 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=58870.000000 s hg38.chr20_KI270870v1_alt 38414 58 + 183433 TCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTAT- s panTro5.chr20 66366804 58 + 66533130 TCACTCTCCACCCTCAGGACCTGTAGAGACCCCCTCACTGTCCAACCTCATGGCCTGT- i panTro5.chr20 C 0 I 1 s panPan2.chr20 62046297 58 + 62195757 TCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTGTCCACTCTCGTGTCCTGT- i panPan2.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 434621 58 - 578057 TCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTGT- i gorGor5.CYUI01015848v1 T 159 T 62 s nomLeu3.chr13 109959795 58 - 110113093 TCAGTATCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGTCCCAT- i nomLeu3.chr13 C 0 I 1 s macFas5.chr10 96351560 58 + 96509753 TCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACATCACCATCCAGCCTCGTGT-CTGTA i macFas5.chr10 C 0 T 33 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=4820.000000 s hg38.chr20_KI270870v1_alt 38472 5 + 183433 GAGAC s panTro5.chr20 66366863 5 + 66533130 GAGAC i panTro5.chr20 I 1 C 0 s panPan2.chr20 62046356 5 + 62195757 GAGAC i panPan2.chr20 I 1 C 0 s nomLeu3.chr13 109959854 5 - 110113093 GAGAC i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96351585 5 + 96509753 GAGAC i macFas5.chr10 T 33 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434679 62 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=15404.000000 s hg38.chr20_KI270870v1_alt 38477 14 + 183433 CCCCTCACTGTCCA s panTro5.chr20 66366868 14 + 66533130 CCCCTCACTCTCCA i panTro5.chr20 C 0 T 393 s panPan2.chr20 62046361 14 + 62195757 CCCCTCACTCTCCA i panPan2.chr20 C 0 T 101 s gorGor5.CYUI01015848v1 434617 14 - 578057 CCCCTCACTGTCCA i gorGor5.CYUI01015848v1 T 62 C 0 s nomLeu3.chr13 109959859 14 - 110113093 CCCCTCACTGTCCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351590 14 + 96509753 CACATCACCATCCA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=6439.000000 s hg38.chr20_KI270870v1_alt 38491 9 + 183433 CTCTCATGT s panPan2.chr20 62046274 9 + 62195757 CTCTCATGT i panPan2.chr20 T 101 C 0 s gorGor5.CYUI01015848v1 434631 9 - 578057 CTCTCATGT i gorGor5.CYUI01015848v1 C 0 I 102 s nomLeu3.chr13 109959873 9 - 110113093 CCCTCATGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351604 9 + 96509753 GCCTCGTGT i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366882 393 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1514.000000 s hg38.chr20_KI270870v1_alt 38500 5 + 183433 CCTAT- s panPan2.chr20 62046283 5 + 62195757 CCTAT- i panPan2.chr20 C 0 I 102 s gorGor5.CYUI01015848v1 434742 5 - 578057 CCTAT- i gorGor5.CYUI01015848v1 I 102 C 0 s nomLeu3.chr13 109959882 5 - 110113093 CCCAT- i nomLeu3.chr13 C 0 I 483 s macFas5.chr10 96351613 5 + 96509753 -CTGTA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366882 393 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=9884.000000 s hg38.chr20_KI270870v1_alt 38505 12 + 183433 GAGACCCCCTCA s panTro5.chr20 66366489 12 + 66533130 GAGACCCCCTCA i panTro5.chr20 T 393 C 0 s panPan2.chr20 62046390 12 + 62195757 GAGACCCCCTCA i panPan2.chr20 I 102 C 0 s gorGor5.CYUI01015848v1 434747 12 - 578057 GAGACCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351618 12 + 96509753 GAGACCACGTCA i macFas5.chr10 C 0 T 170 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959887 483 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1000.000000 s hg38.chr20_KI270870v1_alt 38517 1 + 183433 C s panTro5.chr20 66366501 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046402 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434759 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351460 1 + 96509753 C i macFas5.chr10 T 170 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959887 483 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=12996.000000 s hg38.chr20_KI270870v1_alt 38518 12 + 183433 TGTCCACCCTCA s panTro5.chr20 66366502 12 + 66533130 TCTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046403 12 + 62195757 TGTCCACCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434760 12 - 578057 TGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960370 12 - 110113093 TGCCCACCCTCA i nomLeu3.chr13 I 483 C 0 s macFas5.chr10 96351461 12 + 96509753 TGGCCCCTCTCA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250771 207 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1404.000000 s hg38.chr20_KI270870v1_alt 38530 3 + 183433 TGG s panTro5.chr20 66366514 3 + 66533130 TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046415 3 + 62195757 TGG i panPan2.chr20 C 0 T 68 s gorGor5.CYUI01015848v1 434772 3 - 578057 TGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960382 3 - 110113093 GGA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351473 3 + 96509753 TAT i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250564 3 - 90373283 TGG i chlSab2.chr2 T 207 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=25870.000000 s hg38.chr20_KI270870v1_alt 38533 15 + 183433 CCTATAGAGACCCCC s panTro5.chr20 66366517 15 + 66533130 CCTGTAGAGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046350 15 + 62195757 CCTGTAGAGACCCCC i panPan2.chr20 T 68 C 0 s gorGor5.CYUI01015848v1 434775 15 - 578057 CCTGTAGAGACCCCC i gorGor5.CYUI01015848v1 C 0 T 169 s nomLeu3.chr13 109960385 15 - 110113093 CCCATAGAGACCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351476 15 + 96509753 CCTGTAGAGACCCCC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250567 15 - 90373283 CCTGTAGAGACCACG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=5922.000000 s hg38.chr20_KI270870v1_alt 38548 3 + 183433 TCA s panTro5.chr20 66366532 3 + 66533130 TCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046365 3 + 62195757 TCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 3 - 578057 TCA i gorGor5.CYUI01015848v1 T 169 C 0 s nomLeu3.chr13 109960400 3 - 110113093 TCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351491 3 + 96509753 TCA i macFas5.chr10 C 0 T 34 s chlSab2.chr2 90250582 3 - 90373283 TCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=50631.000000 s hg38.chr20_KI270870v1_alt 38551 31 + 183433 CTGTCCACCCTCATGGCCTGTAGAGACCCCC s panTro5.chr20 66366535 31 + 66533130 CTGTCCACCCTCATGGCCTGTAGAGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046368 31 + 62195757 CTCTCCACCCTCATGGCCTGTAGAGACCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434624 31 - 578057 CTGTCCACTCTCATGTCCTGTAGAGACCCCC i gorGor5.CYUI01015848v1 C 0 T 34 s nomLeu3.chr13 109960403 30 - 110113093 -TGTCCACCCTCATGGCCTGCAGAGACCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351460 31 + 96509753 CTGGCCCCTCTCATATCCTGTAGAGACCCCC i macFas5.chr10 T 34 C 0 s chlSab2.chr2 90250585 31 - 90373283 CCGTCCAGCCTCGTGGCCTGTAGAGACCCCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=169691.000000 s hg38.chr20_KI270870v1_alt 38582 118 + 183433 TCACTGTCCACTCTCATGTCCTATAGAGA-CCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCGTGTCCTATAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366566 118 + 66533130 TCACTGTCCACTCTCATGGCCTATAGAGA-CCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTGTCCACCCTCA i panTro5.chr20 C 0 I 306 s panPan2.chr20 62046399 118 + 62195757 TCACTGTCCACCCTCATGGCCTGTAGAGA-CCCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 C 0 T 127 s gorGor5.CYUI01015848v1 434621 118 - 578057 TCACTGTCCACTCTCATGTCCTGTAGAGA-CCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCTACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 T 34 C 0 s nomLeu3.chr13 109960433 115 - 110113093 TCACTGTCCACCCTCAGGACCCATAGAGA-CCCCCTCA-TGTCCACCCTCAGGACCCATAGAGACCCCCTCA-TGCCCACCCTCAGGACCCATAGAGACCCCCTCA-TGTCCACCCTCA i nomLeu3.chr13 C 0 T 560 s macFas5.chr10 96351491 119 + 96509753 TCACTGTTCACCCTTGTGTCCTGTAGAGACCCCCCCCAGTGTCCAGCCTCATGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACATCACCATCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250616 118 - 90373283 TCAGTGTCCAGCCTCGTGACCTGTAGAGA-CCCCCTCAGTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACCATCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2998.000000 s hg38.chr20_KI270870v1_alt 38700 8 + 183433 TGTCCTAT s panTro5.chr20 66366990 8 + 66533130 TGGCCTGT i panTro5.chr20 I 306 I 1 s gorGor5.CYUI01015848v1 434739 8 - 578057 TGTCCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351610 7 + 96509753 T-GTCTGT i macFas5.chr10 C 0 I 1 s chlSab2.chr2 90250734 8 - 90373283 TGGCCTGT i chlSab2.chr2 C 0 T 296 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 127 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960548 560 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=7230.000000 s hg38.chr20_KI270870v1_alt 38708 5 + 183433 GAGAC s panTro5.chr20 66366999 5 + 66533130 GAGAC i panTro5.chr20 I 1 C 0 s panPan2.chr20 62046390 5 + 62195757 GAGAC i panPan2.chr20 T 127 C 0 s gorGor5.CYUI01015848v1 434747 5 - 578057 GAGAC i gorGor5.CYUI01015848v1 C 0 T 135 s nomLeu3.chr13 109959988 5 - 110113093 GAGAc i nomLeu3.chr13 T 560 C 0 s macFas5.chr10 96351618 5 + 96509753 GAGAC i macFas5.chr10 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=15518.000000 s hg38.chr20_KI270870v1_alt 38713 26 + 183433 CCCCTCACTGTCAACTCTCATGTCCT s panTro5.chr20 66367004 26 + 66533130 CCCCTCACTGTCCACTCTCATGGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046395 26 + 62195757 CCCCTCACTGTCCACCCTCATGGCCT i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959993 25 - 110113093 cccctca-tgtccaccctcatgtccc i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351623 26 + 96509753 CACGTCACCGCCCAGCCTCGTGGCCT i macFas5.chr10 C 0 T 33 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434752 135 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=-750.000000 s hg38.chr20_KI270870v1_alt 38739 2 + 183433 AT- s panTro5.chr20 66367030 2 + 66533130 AT- i panTro5.chr20 C 0 T 543 s panPan2.chr20 62046421 2 + 62195757 GT- i panPan2.chr20 C 0 T 67 s nomLeu3.chr13 109960018 2 - 110113093 at- i nomLeu3.chr13 C 0 I 1 s macFas5.chr10 96351616 2 + 96509753 -TA i macFas5.chr10 T 33 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434752 135 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=3964.000000 s hg38.chr20_KI270870v1_alt 38741 5 + 183433 GAGAA s panTro5.chr20 66366489 5 + 66533130 GAGAC i panTro5.chr20 T 543 C 0 s panPan2.chr20 62046356 5 + 62195757 GAGAC i panPan2.chr20 T 67 C 0 s nomLeu3.chr13 109960021 5 - 110113093 gagac i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96351618 5 + 96509753 GAGAC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434752 135 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=8035.000000 s hg38.chr20_KI270870v1_alt 38746 7 + 183433 CCCCTCA s panTro5.chr20 66366494 7 + 66533130 CCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046361 7 + 62195757 CCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434617 7 - 578057 CCCCTCA i gorGor5.CYUI01015848v1 T 135 C 0 s nomLeu3.chr13 109960026 7 - 110113093 cccctca i nomLeu3.chr13 C 0 I 67 s macFas5.chr10 96351623 7 + 96509753 CACGTCA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=61334.000000 s hg38.chr20_KI270870v1_alt 38753 54 + 183433 CTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTG s panTro5.chr20 66366501 54 + 66533130 CTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046368 54 + 62195757 CTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434624 54 - 578057 CTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTG i gorGor5.CYUI01015848v1 C 0 I 74 s nomLeu3.chr13 109960100 54 - 110113093 CTGTCCACCCTCAGGACCTGCAGAGACCCCCTCACTGTCCACCCTCATGGCCTG i nomLeu3.chr13 I 67 C 0 s macFas5.chr10 96351630 54 + 96509753 CCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTCGTGGCCTG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=623.000000 s hg38.chr20_KI270870v1_alt 38807 2 + 183433 TA s panTro5.chr20 66366555 2 + 66533130 TA i panTro5.chr20 C 0 I 136 s panPan2.chr20 62046422 2 + 62195757 TA i panPan2.chr20 C 0 T 148 s nomLeu3.chr13 109960154 2 - 110113093 CA i nomLeu3.chr13 C 0 T 156 s macFas5.chr10 96351684 2 + 96509753 GA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434678 74 - 578057 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2224.000000 s hg38.chr20_KI270870v1_alt 38809 13 + 183433 GAAACCCCCTCAA s panTro5.chr20 66366693 13 + 66533130 GAGACCCCCTCAC i panTro5.chr20 I 136 C 0 s macFas5.chr10 96351686 13 + 96509753 GAGACCACGTCAC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046424 148 + 62195757 T e gorGor5.CYUI01015848v1 434678 74 - 578057 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960156 156 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=3597.000000 s hg38.chr20_KI270870v1_alt 38822 8 + 183433 TGTCCACC s panTro5.chr20 66366706 8 + 66533130 TGTCCACC i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109960000 8 - 110113093 tgtccacc i nomLeu3.chr13 T 156 C 0 s macFas5.chr10 96351699 8 + 96509753 CGTCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046424 148 + 62195757 T e gorGor5.CYUI01015848v1 434678 74 - 578057 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=9794.000000 s hg38.chr20_KI270870v1_alt 38830 17 + 183433 CTCATGTCCTATAAAAA s panTro5.chr20 66366714 17 + 66533130 CTCATGGCCTGTAGAGA i panTro5.chr20 C 0 T 292 s panPan2.chr20 62046276 17 + 62195757 CTCATGTCCTATGAGAC i panPan2.chr20 T 148 C 0 s nomLeu3.chr13 109960008 17 - 110113093 ctcatgtcccatagaga i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351707 17 + 96509753 CTCGTGGCCTGTAGAGA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434678 74 - 578057 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=3144.000000 s hg38.chr20_KI270870v1_alt 38847 4 + 183433 CCCC s panPan2.chr20 62046293 4 + 62195757 CCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434752 4 - 578057 CCCC i gorGor5.CYUI01015848v1 I 74 C 0 s nomLeu3.chr13 109960025 4 - 110113093 cccc i nomLeu3.chr13 C 0 T 302 s macFas5.chr10 96351724 4 + 96509753 CCAC i macFas5.chr10 C 0 T 114 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250742 296 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366731 292 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=6242.000000 s hg38.chr20_KI270870v1_alt 38851 9 + 183433 TCACTGTCT s panPan2.chr20 62046297 9 + 62195757 TCACTGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434756 9 - 578057 TCACTGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959727 9 - 110113093 TCAGTATCC i nomLeu3.chr13 T 302 C 0 s chlSab2.chr2 90250446 9 - 90373283 TCAGTGTCC i chlSab2.chr2 T 296 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366731 292 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351728 114 + 96509753 T a score=3308.000000 s hg38.chr20_KI270870v1_alt 38860 3 + 183433 ACC s panTro5.chr20 66366439 3 + 66533130 ACT i panTro5.chr20 T 292 C 0 s panPan2.chr20 62046306 3 + 62195757 ACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434765 3 - 578057 ACC i gorGor5.CYUI01015848v1 C 0 T 201 s nomLeu3.chr13 109959736 3 - 110113093 ACC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250455 3 - 90373283 ACC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351728 114 + 96509753 T a score=15266.000000 s hg38.chr20_KI270870v1_alt 38863 13 + 183433 CTCATGTCCTATA s panTro5.chr20 66366442 13 + 66533130 CTCGTGTCCTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046309 13 + 62195757 CTCGTGTCCTGTA i panPan2.chr20 C 0 T 34 s gorGor5.CYUI01015848v1 434567 13 - 578057 CTCATGTCCTGTA i gorGor5.CYUI01015848v1 T 201 C 0 s nomLeu3.chr13 109959739 13 - 110113093 CTCATGTCCCATA i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250458 13 - 90373283 CTCATGTTCTGTA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351728 114 + 96509753 T a score=40747.000000 s hg38.chr20_KI270870v1_alt 38876 33 + 183433 GAGACCCCCTCACTGTCCACTCTCATGTCCTAT s panTro5.chr20 66366455 33 + 66533130 GAGACCCCCTCACTGTCCACTCTCGTGTCCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046288 33 + 62195757 GAGACCCCCTCACTGTCCACTCTCGTGTCCTGT i panPan2.chr20 T 34 C 0 s gorGor5.CYUI01015848v1 434580 33 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTAT i gorGor5.CYUI01015848v1 C 0 I 8 s nomLeu3.chr13 109959752 33 - 110113093 GAGACCCCCTCACTGTCCACCCTCATGTCCCAT i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250471 33 - 90373283 GAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGT i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351728 114 + 96509753 T a score=19620.000000 s hg38.chr20_KI270870v1_alt 38909 29 + 183433 AGAGACCCCCTCACTGTTCACCCTCGTGT s panTro5.chr20 66366488 29 + 66533130 AGAGACCCCCTCACTCTCCACCCTCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046321 29 + 62195757 AGAGACCCCCTCACTGTCCACTCTCGTGT i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959785 29 - 110113093 AGAGACCCCCTCAGTATCCACCCTCATGT i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250504 29 - 90373283 AGAGACCACGTCACCGTCCAGCCTCGTGG i chlSab2.chr2 C 0 I 340 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434613 8 - 578057 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351728 114 + 96509753 T a score=2000.000000 s hg38.chr20_KI270870v1_alt 38938 2 + 183433 CC s panTro5.chr20 66366517 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046350 2 + 62195757 CC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959814 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250873 2 - 90373283 CC i chlSab2.chr2 I 340 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434613 8 - 578057 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351728 114 + 96509753 T a score=13637.000000 s hg38.chr20_KI270870v1_alt 38940 13 + 183433 TATAGAGACCCCC s panTro5.chr20 66366519 13 + 66533130 TGTAGAGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046352 13 + 62195757 TGTAGAGACCCCC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959816 13 - 110113093 CATAGAGACCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351614 13 + 96509753 TGTAGAGACCACG i macFas5.chr10 T 114 C 0 s chlSab2.chr2 90250875 13 - 90373283 TGTAGAGACCACG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434613 8 - 578057 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=39072.000000 s hg38.chr20_KI270870v1_alt 38953 26 + 183433 TCACTGTCCACCCTCGTGGCCTGTAA s panTro5.chr20 66366532 26 + 66533130 TCACTGTCCACCCTCATGGCCTGTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046365 26 + 62195757 TCACTCTCCACCCTCATGGCCTGTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 26 - 578057 TCACTGTCCACTCTCATGTCCTGTAG i gorGor5.CYUI01015848v1 I 8 C 0 s nomLeu3.chr13 109959829 26 - 110113093 TCACTGTCCACCCTCATGTCCCATAG i nomLeu3.chr13 C 0 T 34 s macFas5.chr10 96351627 26 + 96509753 TCACCGCCCAGCCTCGTGGCCTGGAG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250888 26 - 90373283 TCACCGTCCAGCCTCGTGGCCTGTAG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=47506.000000 s hg38.chr20_KI270870v1_alt 38979 31 + 183433 AGACCCCCTCACTGTCCACCCTCATGTCCTA s panTro5.chr20 66366558 31 + 66533130 AGACCCCCTCACTGTCCACTCTCATGGCCTA i panTro5.chr20 C 0 I 272 s panPan2.chr20 62046391 31 + 62195757 AGACCCCCTCACTGTCCACCCTCATGGCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434647 31 - 578057 AGACCCCCTCACTGTCCACCCTCATGTCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959821 31 - 110113093 AGACCCCCTCACTGTCCACCCTCATGTCCCA i nomLeu3.chr13 T 34 C 0 s macFas5.chr10 96351653 31 + 96509753 AGACCACGTCACCGCCCAGCCTCGTGGCCTG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250914 31 - 90373283 AGACCACGTCACCGTCCAGCCTCGTGGCCTG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=40698.000000 s hg38.chr20_KI270870v1_alt 39010 26 + 183433 TAGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66366861 26 + 66533130 TAGAGACCCCCTCACTCTCCACCCTC i panTro5.chr20 I 272 C 0 s panPan2.chr20 62046422 26 + 62195757 TAGAGACCCCCTCACTGTCCACTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434678 26 - 578057 TAGAGACCCCCTCACTGTCTACCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959852 26 - 110113093 TAGAGACCCCCTCACTGTCCACCCTC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351684 26 + 96509753 GAGAGACCACGTCACCGTCCAGCCTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250945 26 - 90373283 TAGAGACCACGTCACCGTCCAGCCTC i chlSab2.chr2 C 0 T 340 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=64472.000000 s hg38.chr20_KI270870v1_alt 39036 40 + 183433 ATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCC s panTro5.chr20 66366887 40 + 66533130 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046448 40 + 62195757 ATGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434704 40 - 578057 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959878 40 - 110113093 ATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGTCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351710 40 + 96509753 GTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGGCC i macFas5.chr10 C 0 T 102 s chlSab2.chr2 90250631 40 - 90373283 GTGACCTGTAGAGACCCCCTCAGTGTCCAGCCTCGTGGCC i chlSab2.chr2 T 340 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2334.000000 s hg38.chr20_KI270870v1_alt 39076 3 + 183433 TAT s panTro5.chr20 66366927 3 + 66533130 TAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046488 3 + 62195757 TGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434744 3 - 578057 TAT i gorGor5.CYUI01015848v1 C 0 T 68 s nomLeu3.chr13 109959918 3 - 110113093 CAT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351648 3 + 96509753 TGG i macFas5.chr10 T 102 C 0 s chlSab2.chr2 90250671 3 - 90373283 TGT i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=41114.000000 s hg38.chr20_KI270870v1_alt 39079 25 + 183433 AGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66366930 25 + 66533130 AGAGACCCCCTCACTGTCCACTCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046491 25 + 62195757 AGAGACCCCCTCACTGTCCACCCTC i panPan2.chr20 C 0 T 34 s gorGor5.CYUI01015848v1 434679 25 - 578057 AGAGACCCCCTCACTGTCTACCCTC i gorGor5.CYUI01015848v1 T 68 C 0 s nomLeu3.chr13 109959921 25 - 110113093 AGAGACCCCCTCACTGTCCACCCTC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351651 25 + 96509753 AGAGACCACGTCACCGCCCAGCCTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250674 25 - 90373283 AGAGACCACGTCACTGTCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=52841.000000 s hg38.chr20_KI270870v1_alt 39104 35 + 183433 GTGTCCTATAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366955 35 + 66533130 ATGTCCTGTAGAGACCCCCTCACTCTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046482 35 + 62195757 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 T 34 T 34 s gorGor5.CYUI01015848v1 434704 35 - 578057 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959946 35 - 110113093 ATGTCCCATAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351676 35 + 96509753 GTGGCCTGGAGAGACCACGTCACCGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250699 35 - 90373283 GTGGCCTGTAGAGACCACGTCACCATCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=7916.000000 s hg38.chr20_KI270870v1_alt 39139 8 + 183433 TGTCCTAT s panTro5.chr20 66366990 8 + 66533130 TGGCCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046483 8 + 62195757 TGTCCTGT i panPan2.chr20 T 34 C 0 s gorGor5.CYUI01015848v1 434739 8 - 578057 TGTCCTAT i gorGor5.CYUI01015848v1 C 0 T 34 s nomLeu3.chr13 109959981 6 - 110113093 TGTCCC-- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351711 8 + 96509753 TGGCCTGT i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250734 8 - 90373283 TGGCCTGT i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=40824.000000 s hg38.chr20_KI270870v1_alt 39147 25 + 183433 AGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66366998 25 + 66533130 AGAGACCCCCTCACTGTCCACTCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046491 25 + 62195757 AGAGACCCCCTCACTGTCCACCCTC i panPan2.chr20 C 0 T 34 s gorGor5.CYUI01015848v1 434713 25 - 578057 AGAGACCCCCTCACTGTCCACCCTC i gorGor5.CYUI01015848v1 T 34 C 0 s nomLeu3.chr13 109959987 24 - 110113093 AGAGAccccctca-tgtccaccctc i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351719 25 + 96509753 AGAGACCACGTCACTGTCCAGCCTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250742 25 - 90373283 AGAGACCCCCTCAGTGTCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=7865.000000 s hg38.chr20_KI270870v1_alt 39172 6 + 183433 GTGTCC s panTro5.chr20 66367023 6 + 66533130 ATGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046482 6 + 62195757 ATGTCC i panPan2.chr20 T 34 C 0 s gorGor5.CYUI01015848v1 434738 6 - 578057 ATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960011 6 - 110113093 atgtcc i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351744 6 + 96509753 GTGGCC i macFas5.chr10 C 0 T 274 s chlSab2.chr2 90250767 6 - 90373283 GTGACC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2518.000000 s hg38.chr20_KI270870v1_alt 39178 3 + 183433 TAT s panTro5.chr20 66367029 3 + 66533130 TAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046488 3 + 62195757 TGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434744 3 - 578057 TAT i gorGor5.CYUI01015848v1 C 0 T 73 s nomLeu3.chr13 109960017 3 - 110113093 cat i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250773 3 - 90373283 TGT i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 274 + 96509753 T a score=6730.000000 s hg38.chr20_KI270870v1_alt 39181 7 + 183433 AGAGACC s panTro5.chr20 66367032 7 + 66533130 AGAGACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046491 7 + 62195757 AGAGACC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109960020 7 - 110113093 agagacc i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250776 7 - 90373283 AGAGACC i chlSab2.chr2 C 0 T 12 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434747 73 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 274 + 96509753 T a score=3492.000000 s hg38.chr20_KI270870v1_alt 39188 6 + 183433 CCCTCA s panTro5.chr20 66367039 6 + 66533130 CCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046498 6 + 62195757 CCCTCA i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109960027 6 - 110113093 ccctca i nomLeu3.chr13 C 0 T 212 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434747 73 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 274 + 96509753 T a score=2169.000000 s hg38.chr20_KI270870v1_alt 39194 9 + 183433 CTGTCCACC s panTro5.chr20 66367045 9 + 66533130 CTCTCCACC i panTro5.chr20 C 0 T 303 s panPan2.chr20 62046504 9 + 62195757 CTGTCCACC i panPan2.chr20 C 0 T 157 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434747 73 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960033 212 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 274 + 96509753 T a score=0.000000 s hg38.chr20_KI270870v1_alt 39203 4 + 183433 AACA e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046513 157 + 62195757 T e gorGor5.CYUI01015848v1 434747 73 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367054 303 + 66533130 T e nomLeu3.chr13 109960033 212 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 274 + 96509753 T a score=-172.000000 s hg38.chr20_KI270870v1_alt 39207 10 + 183433 AAAAAATATA s panTro5.chr20 66366751 10 + 66533130 ATGTCCTGTA i panTro5.chr20 T 303 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046513 157 + 62195757 T e gorGor5.CYUI01015848v1 434747 73 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960033 212 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 274 + 96509753 T a score=300.000000 s hg38.chr20_KI270870v1_alt 39217 1 + 183433 G s panTro5.chr20 66366761 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046356 1 + 62195757 G i panPan2.chr20 T 157 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434747 73 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960033 212 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 274 + 96509753 T a score=13308.000000 s hg38.chr20_KI270870v1_alt 39218 27 + 183433 AGACCCCCTCACTGTCCACCCATATGG s panTro5.chr20 66366762 27 + 66533130 AGACCCCCTCACTGTCCACCCTCATGG i panTro5.chr20 C 0 T 34 s panPan2.chr20 62046357 27 + 62195757 AGACCCCCTCACTCTCCACCCTCATGG i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959821 27 - 110113093 AGACCCCCTCACTGTCCACCCTCATGT i nomLeu3.chr13 T 212 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434747 73 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 274 + 96509753 T a score=29155.000000 s hg38.chr20_KI270870v1_alt 39245 21 + 183433 CCTGTAGAGACCCCCTCACTG s panTro5.chr20 66366755 21 + 66533130 CCTGTAGAGACCCCCTCACTG i panTro5.chr20 T 34 T 204 s panPan2.chr20 62046384 21 + 62195757 CCTGTAGAGACCCCCTCACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434674 21 - 578057 CCTGTAGAGACCCCCTCACTG i gorGor5.CYUI01015848v1 T 73 C 0 s nomLeu3.chr13 109959848 21 - 110113093 CCCATAGAGACCCCCTCACTG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351476 21 + 96509753 CCTGTAGAGACCCCCTCACTG i macFas5.chr10 T 274 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=6765.000000 s hg38.chr20_KI270870v1_alt 39266 6 + 183433 TCCACC s panTro5.chr20 66366572 6 + 66533130 TCCACT i panTro5.chr20 T 204 C 0 s panPan2.chr20 62046405 6 + 62195757 TCCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434695 6 - 578057 TCTACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959869 6 - 110113093 TCCACC i nomLeu3.chr13 C 0 I 4 s macFas5.chr10 96351497 6 + 96509753 TTCACC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2573.000000 s hg38.chr20_KI270870v1_alt 39272 4 + 183433 CTCG s panTro5.chr20 66366578 4 + 66533130 CTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046411 4 + 62195757 CTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434701 4 - 578057 CTCA i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351503 4 + 96509753 CTTG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959875 4 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=15953.000000 s hg38.chr20_KI270870v1_alt 39276 14 + 183433 TGTCTTATAGAGAC s panTro5.chr20 66366582 14 + 66533130 TGGCCTATAGAGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046415 14 + 62195757 TGGCCTGTAGAGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434705 14 - 578057 TGTCCTGTAGAGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959879 14 - 110113093 TGTCCCATAGAGAC i nomLeu3.chr13 I 4 C 0 s macFas5.chr10 96351507 14 + 96509753 TGTCCTGTAGAGAC i macFas5.chr10 C 0 I 26 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=13855.000000 s hg38.chr20_KI270870v1_alt 39290 16 + 183433 CCCCTCACTGTCCACT s panTro5.chr20 66366596 16 + 66533130 CCCCTCACTCTCCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046429 16 + 62195757 CCCCTCACTGTCCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434719 16 - 578057 CCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959893 16 - 110113093 CCCCTCACTGTCCACC i nomLeu3.chr13 C 0 I 8 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351521 26 + 96509753 I a score=3969.000000 s hg38.chr20_KI270870v1_alt 39306 8 + 183433 CTCATGTC s panTro5.chr20 66366612 8 + 66533130 CTCATGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046445 8 + 62195757 CTCATGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434735 8 - 578057 CTCATGTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959909 8 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351521 26 + 96509753 I a score=144.000000 s hg38.chr20_KI270870v1_alt 39314 1 + 183433 A s panTro5.chr20 66366620 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046453 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434743 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959917 1 - 110113093 C i nomLeu3.chr13 I 8 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351521 26 + 96509753 I a score=1049.000000 s hg38.chr20_KI270870v1_alt 39315 2 + 183433 TA s panTro5.chr20 66366621 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046454 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434744 2 - 578057 TA i gorGor5.CYUI01015848v1 C 0 T 68 s nomLeu3.chr13 109959918 2 - 110113093 CA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351547 2 + 96509753 TG i macFas5.chr10 I 26 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=32708.000000 s hg38.chr20_KI270870v1_alt 39317 27 + 183433 TAGAGACCCCCTCACTGTCCACCCTCG s panTro5.chr20 66366623 27 + 66533130 TAGAGACCCCCTCACTGTCCACTCTCA i panTro5.chr20 C 0 I 34 s panPan2.chr20 62046456 27 + 62195757 TAGAGACCCCCTCACTCTCCACCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434678 27 - 578057 TAGAGACCCCCTCACTGTCTACCCTCA i gorGor5.CYUI01015848v1 T 68 C 0 s nomLeu3.chr13 109959920 27 - 110113093 TAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351549 27 + 96509753 TAGAGATCCCCTCAGTGTCCAGCCTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=34433.000000 s hg38.chr20_KI270870v1_alt 39344 30 + 183433 TGTCCTATAGAGACCCCCTCACTGTCAACT s panTro5.chr20 66366684 30 + 66533130 TGGCCTGTAGAGACCCCCTCACTGTCCACC i panTro5.chr20 I 34 C 0 s panPan2.chr20 62046483 30 + 62195757 TGTCCTGTAGAGACCCCCTCACTGTCCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434705 30 - 578057 TGTCCTGTAGAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959947 30 - 110113093 TGTCCCATAGAGACCCCCTCACTGTCCACC i nomLeu3.chr13 C 0 T 336 s macFas5.chr10 96351576 30 + 96509753 TGTCCTGTAGAGACCACATCACCATCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=3332.000000 s hg38.chr20_KI270870v1_alt 39374 4 + 183433 CTCA s panTro5.chr20 66366714 4 + 66533130 CTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046513 4 + 62195757 CTCA i panPan2.chr20 C 0 T 93 s gorGor5.CYUI01015848v1 434735 4 - 578057 CTCA i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351606 4 + 96509753 CTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959977 336 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1077.000000 s hg38.chr20_KI270870v1_alt 39378 3 + 183433 TGT s panTro5.chr20 66366718 3 + 66533130 TGG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434739 3 - 578057 TGT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351610 3 + 96509753 TGT i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 12 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 93 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959977 336 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=3505.000000 s hg38.chr20_KI270870v1_alt 39381 5 + 183433 CCTAT s panTro5.chr20 66366721 5 + 66533130 CCTGT i panTro5.chr20 C 0 I 103 s gorGor5.CYUI01015848v1 434742 5 - 578057 CCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351613 4 + 96509753 -CTGT i macFas5.chr10 C 0 I 1 s chlSab2.chr2 90250771 5 - 90373283 CCTGT i chlSab2.chr2 T 12 I 69 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 93 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959977 336 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=9622.000000 s hg38.chr20_KI270870v1_alt 39386 9 + 183433 GAGACCCCC s panTro5.chr20 66366829 9 + 66533130 GAGACCCCC i panTro5.chr20 I 103 C 0 s panPan2.chr20 62046424 9 + 62195757 GAGACCCCC i panPan2.chr20 T 93 C 0 s gorGor5.CYUI01015848v1 434747 9 - 578057 GAGACCCCC i gorGor5.CYUI01015848v1 C 0 T 135 s macFas5.chr10 96351618 9 + 96509753 GAGACCACG i macFas5.chr10 I 1 C 0 s chlSab2.chr2 90250845 9 - 90373283 GAGACCACA i chlSab2.chr2 I 69 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959977 336 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=17200.000000 s hg38.chr20_KI270870v1_alt 39395 16 + 183433 TCACTGTCCACCCTCA s panTro5.chr20 66366838 16 + 66533130 TCACTGTCCAACCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046433 16 + 62195757 TCACTGTCCACTCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 16 - 578057 TCACTGTCCACTCTCA i gorGor5.CYUI01015848v1 T 135 C 0 s macFas5.chr10 96351627 16 + 96509753 TCACCGCCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250854 16 - 90373283 TCACCGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959977 336 - 110113093 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=98747.000000 s hg38.chr20_KI270870v1_alt 39411 67 + 183433 TGGCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66366854 67 + 66533130 TGGCCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046449 67 + 62195757 TGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i panPan2.chr20 C 0 T 204 s gorGor5.CYUI01015848v1 434637 67 - 578057 TGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCTACCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959641 67 - 110113093 TGGCCCATAGAGACCCCCTCAGTGTCCAGCCTCAGGACCTTCAGAGACCCCCTCAGTGTCCACCCTC i nomLeu3.chr13 T 336 C 0 s macFas5.chr10 96351643 67 + 96509753 TGGCCTGGAGAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGTCCAGCCTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250870 67 - 90373283 TGGCCTGTAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACCGTCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=37372.000000 s hg38.chr20_KI270870v1_alt 39478 25 + 183433 GTGTCCTATAGAGACCCCCTCACTG s panTro5.chr20 66366921 25 + 66533130 ATGTCCTATAGAGACCCCCTCACTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046312 25 + 62195757 GTGTCCTGTAGAGACCCCCTCACTG i panPan2.chr20 T 204 C 0 s gorGor5.CYUI01015848v1 434704 25 - 578057 ATGTCCTGTAGAGACCCCCTCACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959708 25 - 110113093 ATGTCCCATAGAGACCCCCTCAGTA i nomLeu3.chr13 C 0 I 321 s macFas5.chr10 96351710 25 + 96509753 GTGGCCTGTAGAGACCACGTCACTG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250937 25 - 90373283 GTGGCCTGTAGAGACCACGTCACCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=5730.000000 s hg38.chr20_KI270870v1_alt 39503 4 + 183433 TCCA s panTro5.chr20 66366946 4 + 66533130 TCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046337 4 + 62195757 TCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434729 4 - 578057 TCCA i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351735 4 + 96509753 TCCA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250962 4 - 90373283 TCCA i chlSab2.chr2 C 0 T 520 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959733 321 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=5384.000000 s hg38.chr20_KI270870v1_alt 39507 9 + 183433 CTCTCATGT s panTro5.chr20 66366950 9 + 66533130 CTCTCATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046341 9 + 62195757 CTCTCGTGT i panPan2.chr20 C 0 I 40 s gorGor5.CYUI01015848v1 434733 9 - 578057 CCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351739 9 + 96509753 GCCTCGTGG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959733 321 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1200.000000 s hg38.chr20_KI270870v1_alt 39516 2 + 183433 CC s panTro5.chr20 66366959 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434742 2 - 578057 CC i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351748 2 + 96509753 CC i macFas5.chr10 C 0 T 135 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046350 40 + 62195757 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959733 321 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=-381.000000 s hg38.chr20_KI270870v1_alt 39518 3 + 183433 -TAT s panTro5.chr20 66366961 3 + 66533130 -TGT i panTro5.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 434744 3 - 578057 -TAT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351615 3 + 96509753 GTA- i macFas5.chr10 T 135 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046350 40 + 62195757 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959733 321 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=33305.000000 s hg38.chr20_KI270870v1_alt 39521 28 + 183433 GAGACCCCCTCACTGTCCACCCTCATGG s panTro5.chr20 66366965 28 + 66533130 GAGACCCCCTCACTCTCCACCCTCATGG i panTro5.chr20 I 1 C 0 s panPan2.chr20 62046390 28 + 62195757 GAGACCCCCTCACTGTCCACCCTCATGG i panPan2.chr20 I 40 T 68 s gorGor5.CYUI01015848v1 434747 28 - 578057 GAGACCCCCTCACTGTCCACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960054 28 - 110113093 GAGACCCCCTCACTGTCCACCCTCATGG i nomLeu3.chr13 I 321 C 0 s macFas5.chr10 96351618 28 + 96509753 GAGACCACGTCACCGCCCAGCCTCGTGG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=74142.000000 s hg38.chr20_KI270870v1_alt 39549 65 + 183433 CCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366993 65 + 66533130 CCTGTAGAGACCCCCTCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTCTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046350 65 + 62195757 CCTGTAGAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 T 68 C 0 s gorGor5.CYUI01015848v1 434775 65 - 578057 CCTGTAGAGACCCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 T 101 s nomLeu3.chr13 109960082 65 - 110113093 CCTGCAGAGACCCCCTCACTGTCCACCCTCAGGACCTGCAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351646 65 + 96509753 CCTGGAGAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGTCCAGCCTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=8207.000000 s hg38.chr20_KI270870v1_alt 39614 8 + 183433 TGTCCTAT s panTro5.chr20 66367058 8 + 66533130 TGGCCTGT i panTro5.chr20 C 0 I 1 s panPan2.chr20 62046415 8 + 62195757 TGGCCTGT i panPan2.chr20 C 0 T 33 s gorGor5.CYUI01015848v1 434739 8 - 578057 TGTCCTAT i gorGor5.CYUI01015848v1 T 101 C 0 s nomLeu3.chr13 109960147 8 - 110113093 TGGCCTGC i nomLeu3.chr13 C 0 I 1 s macFas5.chr10 96351711 8 + 96509753 TGGCCTGT i macFas5.chr10 C 0 T 134 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=19369.000000 s hg38.chr20_KI270870v1_alt 39622 25 + 183433 GAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66367067 25 + 66533130 GAGACCCCCTCACTGTCCACCCTCA i panTro5.chr20 I 1 T 569 s gorGor5.CYUI01015848v1 434747 25 - 578057 GAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960156 25 - 110113093 GAGACCCCCTCACTGTCCACCCTCC i nomLeu3.chr13 I 1 I 5 s macFas5.chr10 96351585 25 + 96509753 GAGACCACATCACCATCCAGCCTCG i macFas5.chr10 T 134 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046423 33 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=-1974.000000 s hg38.chr20_KI270870v1_alt 39647 8 + 183433 TGTCCTAT----- s gorGor5.CYUI01015848v1 434772 3 - 578057 TGT---------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960186 3 - 110113093 TGC---------- i nomLeu3.chr13 I 5 T 403 s macFas5.chr10 96351610 8 + 96509753 TGT-----CTGTA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046423 33 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367092 569 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=47316.000000 s hg38.chr20_KI270870v1_alt 39655 55 + 183433 GAGACCCCCTCACTGTCCACCCTCATGGCCTATAGAGACCCCCTCACTGTCCACT s panTro5.chr20 66366523 55 + 66533130 GAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACT i panTro5.chr20 T 569 I 306 s panPan2.chr20 62046390 55 + 62195757 GAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACT i panPan2.chr20 T 33 C 0 s gorGor5.CYUI01015848v1 434775 27 - 578057 ----------------------------CCTGTAGAGACCCCCTCACTGTCCACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959786 55 - 110113093 GAGACCCCCTCAGTATCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACC i nomLeu3.chr13 T 403 C 0 s macFas5.chr10 96351618 55 + 96509753 GAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=44093.000000 s hg38.chr20_KI270870v1_alt 39710 37 + 183433 CTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66366884 37 + 66533130 CTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i panTro5.chr20 I 306 C 0 s panPan2.chr20 62046445 37 + 62195757 CTCATGTCCTGTAGAGACCCCCTCACTCTCCACCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434802 37 - 578057 CTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i gorGor5.CYUI01015848v1 C 0 T 135 s nomLeu3.chr13 109959841 37 - 110113093 CTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351673 37 + 96509753 CTCGTGGCCTGGAGAGACCACGTCACCGTCCAGCCTC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=40610.000000 s hg38.chr20_KI270870v1_alt 39747 35 + 183433 GTGTCCTATAGAGACCCCCTCACTGTCAACTCTCA s panTro5.chr20 66366921 35 + 66533130 ATGTCCTATAGAGACCCCCTCACTGTCCACTCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046482 35 + 62195757 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 C 0 T 243 s gorGor5.CYUI01015848v1 434704 35 - 578057 ATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 T 135 C 0 s nomLeu3.chr13 109959878 35 - 110113093 ATGTCCCATAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351710 35 + 96509753 GTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=4000.000000 s hg38.chr20_KI270870v1_alt 39782 5 + 183433 TGTCC s panTro5.chr20 66366956 5 + 66533130 TGTCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434739 5 - 578057 TGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959913 5 - 110113093 TGTCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351745 5 + 96509753 TGGCC i macFas5.chr10 C 0 T 144 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 243 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=9624.000000 s hg38.chr20_KI270870v1_alt 39787 22 + 183433 TAT-GAGACCCCCTCACTGTCCA s panTro5.chr20 66366961 23 + 66533130 TGTAGAGACCCCCTCACTCTCCA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434744 22 - 578057 TAT-GAGACCCCCTCACTGTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959918 23 - 110113093 CATAGAGACCCCCTCACTGTCCA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 243 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 144 + 96509753 T a score=10544.000000 s hg38.chr20_KI270870v1_alt 39809 14 + 183433 CTCTCATGTCCTAT s panTro5.chr20 66366984 14 + 66533130 CCCTCATGGCCTGT i panTro5.chr20 C 0 T 135 s panPan2.chr20 62046274 14 + 62195757 CTCTCATGTCCTAT i panPan2.chr20 T 243 C 0 s gorGor5.CYUI01015848v1 434766 14 - 578057 CCCTCATGTCCTGT i gorGor5.CYUI01015848v1 C 0 T 33 s nomLeu3.chr13 109959941 14 - 110113093 CCCTCATGTCCCAT i nomLeu3.chr13 C 0 T 135 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 144 + 96509753 T a score=49120.000000 s hg38.chr20_KI270870v1_alt 39823 55 + 183433 GAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACC s panTro5.chr20 66366863 55 + 66533130 GAGACCCCCTCACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACC i panTro5.chr20 T 135 C 0 s panPan2.chr20 62046288 55 + 62195757 GAGACCCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTGTCCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434747 55 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACT i gorGor5.CYUI01015848v1 T 33 C 0 s nomLeu3.chr13 109959820 55 - 110113093 GAGACCCCCTCACTGTCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACC i nomLeu3.chr13 T 135 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 144 + 96509753 T a score=9607.000000 s hg38.chr20_KI270870v1_alt 39878 12 + 183433 CTCATGTCCTAT- s panTro5.chr20 66366918 12 + 66533130 CTCATGTCCTAT- i panTro5.chr20 C 0 I 1 s panPan2.chr20 62046343 12 + 62195757 CTCGTGTCCTGT- i panPan2.chr20 C 0 T 33 s gorGor5.CYUI01015848v1 434802 12 - 578057 CTCATGTCCTGT- i gorGor5.CYUI01015848v1 C 0 T 134 s nomLeu3.chr13 109959875 12 - 110113093 CTCATGTCCCAT- i nomLeu3.chr13 C 0 I 1 s macFas5.chr10 96351606 12 + 96509753 CTCGTGT-CTGTA i macFas5.chr10 T 144 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=8463.000000 s hg38.chr20_KI270870v1_alt 39890 21 + 183433 GAGACCCCCTCTCTGTCCACC s panTro5.chr20 66366931 21 + 66533130 GAGACCCCCTCACTGTCCACT i panTro5.chr20 I 1 T 327 s nomLeu3.chr13 109959888 21 - 110113093 GAGACCCCCTCACTGTCCACC i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96351618 21 + 96509753 GAGACCACGTCACCGCCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046355 33 + 62195757 T e gorGor5.CYUI01015848v1 434814 134 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=1967.000000 s hg38.chr20_KI270870v1_alt 39911 10 + 183433 CTCATGTCCT s nomLeu3.chr13 109959909 10 - 110113093 CTCATGTCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351639 10 + 96509753 CTCGTGGCCT i macFas5.chr10 C 0 T 98 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046355 33 + 62195757 T e gorGor5.CYUI01015848v1 434814 134 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366952 327 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=182.000000 s hg38.chr20_KI270870v1_alt 39921 2 + 183433 AT s nomLeu3.chr13 109959919 2 - 110113093 AT i nomLeu3.chr13 C 0 T 67 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046355 33 + 62195757 T e gorGor5.CYUI01015848v1 434814 134 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366952 327 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351649 98 + 96509753 T a score=73878.000000 s hg38.chr20_KI270870v1_alt 39923 67 + 183433 GAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTAT- s panTro5.chr20 66366625 67 + 66533130 GAGACCCCCTCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTGT- i panTro5.chr20 T 327 I 1 s panPan2.chr20 62046322 67 + 62195757 GAGACCCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGGCCTGT- i panPan2.chr20 T 33 I 1 s gorGor5.CYUI01015848v1 434680 67 - 578057 GAGACCCCCTCACTGTCTACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTAT- i gorGor5.CYUI01015848v1 T 134 T 167 s nomLeu3.chr13 109959854 67 - 110113093 GAGACCCCCTCACTGTCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGTCCCAT- i nomLeu3.chr13 T 67 I 1 s macFas5.chr10 96351551 67 + 96509753 GAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACATCACCATCCAGCCTCGTG-TCTGTA i macFas5.chr10 T 98 T 136 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=20370.000000 s hg38.chr20_KI270870v1_alt 39990 21 + 183433 GAGACCCCCTCACTGTCCACC s panTro5.chr20 66366693 21 + 66533130 GAGACCCCCTCACTGTCCACC i panTro5.chr20 I 1 T 191 s panPan2.chr20 62046390 21 + 62195757 GAGACCCCCTCACTGTCCACC i panPan2.chr20 I 1 T 135 s gorGor5.CYUI01015848v1 434580 21 - 578057 GAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 T 167 C 0 s nomLeu3.chr13 109959922 21 - 110113093 GAGACCCCCTCACTGTCCACC i nomLeu3.chr13 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351618 136 + 96509753 T a score=6456.000000 s hg38.chr20_KI270870v1_alt 40011 12 + 183433 CTCATGTCCTAT s panPan2.chr20 62046276 12 + 62195757 CTCATGTCCTAT i panPan2.chr20 T 135 C 0 s gorGor5.CYUI01015848v1 434601 12 - 578057 CTCATGTCCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959943 12 - 110113093 CTCATGTCCCAT i nomLeu3.chr13 C 0 I 78 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366714 191 + 66533130 T e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351618 136 + 96509753 T a score=3820.000000 s hg38.chr20_KI270870v1_alt 40023 4 + 183433 GAGA s panTro5.chr20 66366523 4 + 66533130 GAGA i panTro5.chr20 T 191 C 0 s panPan2.chr20 62046288 4 + 62195757 GAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434613 4 - 578057 GAGA i gorGor5.CYUI01015848v1 C 0 I 134 s macFas5.chr10 96351482 4 + 96509753 GAGA i macFas5.chr10 T 136 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959955 78 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=5000.000000 s hg38.chr20_KI270870v1_alt 40027 5 + 183433 CCCCC s panTro5.chr20 66366527 5 + 66533130 CCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046292 5 + 62195757 CCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434751 5 - 578057 CCCCC i gorGor5.CYUI01015848v1 I 134 C 0 s macFas5.chr10 96351486 5 + 96509753 CCCCC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250966 520 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959955 78 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=4605.000000 s hg38.chr20_KI270870v1_alt 40032 4 + 183433 TCAC s panTro5.chr20 66366532 4 + 66533130 TCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046297 4 + 62195757 TCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434756 4 - 578057 TCAC i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351491 4 + 96509753 TCAC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250446 4 - 90373283 TCAG i chlSab2.chr2 T 520 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959955 78 - 110113093 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=64442.000000 s hg38.chr20_KI270870v1_alt 40036 39 + 183433 TGTCCACCCTCATGTCCTATAGAGA-CCCCCTCAGTGTCC s panTro5.chr20 66366536 39 + 66533130 TGTCCACCCTCATGGCCTGTAGAGA-CCCCCTCACTGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046301 39 + 62195757 TGTCCACTCTCGTGTCCTGTAGAGA-CCCCCTCACTGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434760 39 - 578057 TGTCCACCCTCATGTCCTGTAGAGA-CCCCCTCACTGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960033 39 - 110113093 tgtccaccctcatgtcccATAGAGA-CCCCCTCACTGTCC i nomLeu3.chr13 I 78 C 0 s macFas5.chr10 96351495 40 + 96509753 TGTTCACCCTTGTGTCCTGTAGAGACCCCCCCCAGTGTCC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250450 39 - 90373283 TGTCCACCCTCATGTTCTGTAGAGA-TCCCCTCAGTGTCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629030 7 - 3785965 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=2648.000000 s hg38.chr20_KI270870v1_alt 40075 2 + 183433 AC s panTro5.chr20 66366575 2 + 66533130 AC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046340 2 + 62195757 AC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434799 2 - 578057 AC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960072 2 - 110113093 AC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351535 2 + 96509753 AG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3629037 2 - 3785965 AC i cerAty1.NW_012001373v1 I 7 C 0 s chlSab2.chr2 90250489 2 - 90373283 AG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92688935 0 - 92844088 C e otoGar3.GL873542 159957 0 - 22939663 I a score=97825.000000 s hg38.chr20_KI270870v1_alt 40077 39 + 183433 CCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366577 39 + 66533130 TCTCATGGCCTATAGAGACCCCCTCACTCTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046342 39 + 62195757 TCTCGTGTCCTGTAGAGACCCCCTCACTCTCCACCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434801 39 - 578057 TCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 T 200 s nomLeu3.chr13 109960074 39 - 110113093 CCTCATGGCCTGCAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688935 39 - 92844088 CCTCGTGGCCTGGAAAGACCACATCACCGTCCAGCCTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351537 39 + 96509753 CCTCATGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3629039 39 - 3785965 CCTCGTGGCCTGTAGAGACCACGTCACCGTCCAGCCTCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250491 39 - 90373283 CCTCGTGTCCTGTAGAGACCACGTCACCGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=5803.000000 s hg38.chr20_KI270870v1_alt 40116 3 + 183433 TGG s panTro5.chr20 66366616 3 + 66533130 TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046381 3 + 62195757 TGG i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109960113 2 - 110113093 -GG i nomLeu3.chr13 C 0 I 1 s rheMac8.chr10 92688974 3 - 92844088 TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351576 3 + 96509753 TGT i macFas5.chr10 C 0 I 34 s cerAty1.NW_012001373v1 3629078 3 - 3785965 TGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250530 3 - 90373283 TGG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434840 200 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=2800.000000 s hg38.chr20_KI270870v1_alt 40119 1 + 183433 C s panTro5.chr20 66366619 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046384 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434640 1 - 578057 C i gorGor5.CYUI01015848v1 T 200 C 0 s nomLeu3.chr13 109960116 1 - 110113093 C i nomLeu3.chr13 I 1 C 0 s rheMac8.chr10 92688977 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3629081 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250533 1 - 90373283 C i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351579 34 + 96509753 I a score=180031.000000 s hg38.chr20_KI270870v1_alt 40120 67 + 183433 CTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGG s panTro5.chr20 66366620 67 + 66533130 CTGTAGAGACCCCCTCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTGTCCACCCTCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046385 67 + 62195757 CTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434641 67 - 578057 CTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCTACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960117 67 - 110113093 CTGCAGAGACCCCCTCACTGTCCACCCTCATGGCCTGCAGAGACCCCCTCACTGTCCACCCTCCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688978 67 - 92844088 CTGTAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGGAGAGACCACGTCACTGTCCAGCCTCATGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351613 67 + 96509753 CTGTAGAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTCGTGG i macFas5.chr10 I 34 C 0 s cerAty1.NW_012001373v1 3629082 67 - 3785965 CTGTAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250534 67 - 90373283 CTGTAGAGACCCCCTCAGTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACCGTCCAGCCTCGTGG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=10948.000000 s hg38.chr20_KI270870v1_alt 40187 4 + 183433 CCTG s panTro5.chr20 66366687 4 + 66533130 CCTG i panTro5.chr20 C 0 I 238 s panPan2.chr20 62046452 4 + 62195757 CCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434708 4 - 578057 CCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960184 4 - 110113093 CCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689045 4 - 92844088 CCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351680 4 + 96509753 CCTG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250601 4 - 90373283 CCTG i chlSab2.chr2 C 0 I 68 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=2013.000000 s hg38.chr20_KI270870v1_alt 40191 2 + 183433 TA s panTro5.chr20 66366929 2 + 66533130 TA i panTro5.chr20 I 238 C 0 s panPan2.chr20 62046456 2 + 62195757 TA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434712 2 - 578057 TA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960188 2 - 110113093 CA i nomLeu3.chr13 C 0 I 68 s rheMac8.chr10 92689049 2 - 92844088 GA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351684 2 + 96509753 GA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250673 2 - 90373283 TA i chlSab2.chr2 I 68 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=35567.000000 s hg38.chr20_KI270870v1_alt 40193 21 + 183433 GAGACCCCCTCACTGTCCACC s panTro5.chr20 66366931 21 + 66533130 GAGACCCCCTCACTGTCCACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046458 21 + 62195757 GAGACCCCCTCACTCTCCACC i panPan2.chr20 C 0 T 203 s gorGor5.CYUI01015848v1 434714 21 - 578057 GAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960258 15 - 110113093 GAGACCCCCTCACTG------ i nomLeu3.chr13 I 68 C 0 s rheMac8.chr10 92689051 21 - 92844088 GAGACCACATCACCGTCCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351686 21 + 96509753 GAGACCACGTCACCGTCCAGC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250675 21 - 90373283 GAGACCACGTCACTGTCCAGC i chlSab2.chr2 C 0 T 250 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=4365.000000 s hg38.chr20_KI270870v1_alt 40214 3 + 183433 CTC s panTro5.chr20 66366952 3 + 66533130 CTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046276 3 + 62195757 CTC i panPan2.chr20 T 203 C 0 s gorGor5.CYUI01015848v1 434735 3 - 578057 CTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689072 3 - 92844088 CTC i rheMac8.chr10 C 0 T 440 s macFas5.chr10 96351707 3 + 96509753 CTC i macFas5.chr10 C 0 T 101 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250696 250 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960273 0 - 110113093 C e otoGar3.GL873542 159957 0 - 22939663 I a score=9903.000000 s hg38.chr20_KI270870v1_alt 40217 18 + 183433 ATGTCCTAT-GAGACCCCC s panTro5.chr20 66366955 19 + 66533130 ATGTCCTGTAGAGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046279 18 + 62195757 ATGTCCTAT-GAGACCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434738 18 - 578057 ATGTCCTAT-GAGACCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351609 18 + 96509753 GTGTCTGTA-GAGACCACG i macFas5.chr10 T 101 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250696 250 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960273 0 - 110113093 C e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=5060.000000 s hg38.chr20_KI270870v1_alt 40235 6 + 183433 TCACTC s panTro5.chr20 66366974 6 + 66533130 TCACTC i panTro5.chr20 C 0 T 204 s panPan2.chr20 62046297 6 + 62195757 TCACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434756 6 - 578057 TCACTG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351627 6 + 96509753 TCACCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250446 6 - 90373283 TCAGTG i chlSab2.chr2 T 250 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960273 0 - 110113093 C e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=26092.000000 s hg38.chr20_KI270870v1_alt 40241 19 + 183433 TCCACCCTCATGTCCTATA s panTro5.chr20 66366776 19 + 66533130 TCCACCCTCATGGCCTGTA i panTro5.chr20 T 204 I 204 s panPan2.chr20 62046303 19 + 62195757 TCCACTCTCGTGTCCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434762 19 - 578057 TCCACCCTCATGTCCTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960273 19 - 110113093 TCCACCCTCAGGACCCATA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351633 19 + 96509753 CCCAGCCTCGTGGCCTGGA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250452 19 - 90373283 TCCACCCTCATGTTCTGTA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=83419.000000 s hg38.chr20_KI270870v1_alt 40260 59 + 183433 GAGACCCCCTCACTGTCCACTCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366999 59 + 66533130 GAGACCCCCTCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTCTCCACCCTCA i panTro5.chr20 I 204 C 0 s panPan2.chr20 62046322 59 + 62195757 GAGACCCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTCTCCACCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434781 59 - 578057 GAGACCCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 T 169 s nomLeu3.chr13 109960292 57 - 110113093 GAGACCCCCTCA-TGTCCACCCTCAGGACCTGCAGAGACCCCCTCA-TGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351652 59 + 96509753 GAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250471 59 - 90373283 GAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACGTCACCGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=50267.000000 s hg38.chr20_KI270870v1_alt 40319 34 + 183433 TGTCCTATAGAGACCCCCTCACTGTCCACTCTCA s panTro5.chr20 66367058 34 + 66533130 TGGCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panTro5.chr20 C 0 T 170 s panPan2.chr20 62046381 34 + 62195757 TGGCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434671 34 - 578057 TGTCCTGTAGAGACCCCCTCACTGTCTACCCTCA i gorGor5.CYUI01015848v1 T 169 C 0 s nomLeu3.chr13 109960349 33 - 110113093 GGACCCATAGAGACCCCCTCA-TGCCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351711 34 + 96509753 TGGCCTGTAGAGACCACGTCACTGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250530 34 - 90373283 TGGCCTGTAGAGACCCCCTCAGTGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=6066.000000 s hg38.chr20_KI270870v1_alt 40353 5 + 183433 TGTCC s panTro5.chr20 66366922 5 + 66533130 TGTCC i panTro5.chr20 T 170 C 0 s panPan2.chr20 62046415 5 + 62195757 TGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434705 5 - 578057 TGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960382 5 - 110113093 GGACC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351745 5 + 96509753 TGGCC i macFas5.chr10 C 0 T 70 s chlSab2.chr2 90250564 5 - 90373283 TGGCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=19044.000000 s hg38.chr20_KI270870v1_alt 40358 16 + 183433 TATAGAGACCCCCTCA s panTro5.chr20 66366927 16 + 66533130 TATAGAGACCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046420 16 + 62195757 TGTAGAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434710 16 - 578057 TGTAGAGACCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960387 16 - 110113093 CATAGAGACCCCCTCA i nomLeu3.chr13 C 0 T 503 s chlSab2.chr2 90250569 16 - 90373283 TGTAGAGACCACGTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 70 + 96509753 T a score=10154.000000 s hg38.chr20_KI270870v1_alt 40374 9 + 183433 CTGTCCACT s panTro5.chr20 66366943 9 + 66533130 CTGTCCACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046436 9 + 62195757 CTGTCCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434726 9 - 578057 CTGTCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959900 9 - 110113093 CTGTCCACC i nomLeu3.chr13 T 503 C 0 s chlSab2.chr2 90250585 9 - 90373283 CCGTCCAGC i chlSab2.chr2 C 0 I 102 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 70 + 96509753 T a score=8325.000000 s hg38.chr20_KI270870v1_alt 40383 7 + 183433 CTCATGT s panTro5.chr20 66366952 7 + 66533130 CTCATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046445 7 + 62195757 CTCATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434735 7 - 578057 CTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959909 7 - 110113093 CTCATGT i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250696 7 - 90373283 CTCGTGG i chlSab2.chr2 I 102 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 70 + 96509753 T a score=6561.000000 s hg38.chr20_KI270870v1_alt 40390 5 + 183433 CCTAT s panTro5.chr20 66366959 5 + 66533130 CCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046452 5 + 62195757 CCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434742 5 - 578057 CCTAT i gorGor5.CYUI01015848v1 C 0 T 68 s nomLeu3.chr13 109959916 5 - 110113093 CCCAT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351680 5 + 96509753 CCTGG i macFas5.chr10 T 70 C 0 s chlSab2.chr2 90250703 5 - 90373283 CCTGT i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=33290.000000 s hg38.chr20_KI270870v1_alt 40395 22 + 183433 AGAGACCCCCTCACTGTCCACC s panTro5.chr20 66366964 22 + 66533130 AGAGACCCCCTCACTCTCCACC i panTro5.chr20 C 0 I 68 s panPan2.chr20 62046457 22 + 62195757 AGAGACCCCCTCACTCTCCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434679 22 - 578057 AGAGACCCCCTCACTGTCTACC i gorGor5.CYUI01015848v1 T 68 C 0 s nomLeu3.chr13 109959921 22 - 110113093 AGAGACCCCCTCACTGTCCACC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351685 22 + 96509753 AGAGACCACGTCACCGTCCAGC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250708 22 - 90373283 AGAGACCACGTCACCATCCAGC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=28078.000000 s hg38.chr20_KI270870v1_alt 40417 17 + 183433 CTCGTGTCCTATAGAGA s panTro5.chr20 66367054 17 + 66533130 CTCATGGCCTGTAGAGA i panTro5.chr20 I 68 C 0 s panPan2.chr20 62046479 17 + 62195757 CTCATGTCCTGTAGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434701 17 - 578057 CTCATGTCCTGTAGAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959943 17 - 110113093 CTCATGTCCCATAGAGA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351707 17 + 96509753 CTCGTGGCCTGTAGAGA i macFas5.chr10 C 0 T 196 s chlSab2.chr2 90250730 17 - 90373283 CTCGTGGCCTGTAGAGA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=26940.000000 s hg38.chr20_KI270870v1_alt 40434 20 + 183433 CCCCCTCACTGTCCACCCTC s panTro5.chr20 66367071 20 + 66533130 CCCCCTCACTGTCCACCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046496 20 + 62195757 CCCCCTCACTGTCCACCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434718 20 - 578057 CCCCCTCACTGTCCACCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959960 20 - 110113093 CCCCCTCACTGTCCACCCTC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250747 20 - 90373283 CCCCCTCAGTGTCCAGCCTC i chlSab2.chr2 C 0 T 395 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351724 196 + 96509753 T a score=910.000000 s hg38.chr20_KI270870v1_alt 40454 1 + 183433 A s panTro5.chr20 66367091 1 + 66533130 A i panTro5.chr20 C 0 T 136 s panPan2.chr20 62046516 1 + 62195757 A i panPan2.chr20 C 0 T 161 s gorGor5.CYUI01015848v1 434738 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959980 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351724 196 + 96509753 T a score=2892.000000 s hg38.chr20_KI270870v1_alt 40455 5 + 183433 TGTCC s panTro5.chr20 66366956 5 + 66533130 TGTCC i panTro5.chr20 T 136 C 0 s gorGor5.CYUI01015848v1 434739 5 - 578057 TGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959981 5 - 110113093 TGTCC i nomLeu3.chr13 C 0 I 204 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 161 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351724 196 + 96509753 T a score=7452.000000 s hg38.chr20_KI270870v1_alt 40460 36 + 183433 TAT-GAGACCCCCTCACTGTCAACTCTCATGTCCTAT s panTro5.chr20 66366961 37 + 66533130 TGTAGAGACCCCCTCACTCTCCACCCTCATGGCCTGT i panTro5.chr20 C 0 T 135 s gorGor5.CYUI01015848v1 434744 36 - 578057 TAT-GAGACCCCCTCACTGTCCACCCTCATGTCCTGT i gorGor5.CYUI01015848v1 C 0 T 33 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 161 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959986 204 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351724 196 + 96509753 T a score=10730.000000 s hg38.chr20_KI270870v1_alt 40496 11 + 183433 GAGACCCCCTC s panTro5.chr20 66366863 11 + 66533130 GAGACCCCCTC i panTro5.chr20 T 135 C 0 s panPan2.chr20 62046356 11 + 62195757 GAGACCCCCTC i panPan2.chr20 T 161 C 0 s gorGor5.CYUI01015848v1 434747 11 - 578057 GAGACCCCCTC i gorGor5.CYUI01015848v1 T 33 C 0 s nomLeu3.chr13 109960190 11 - 110113093 GAGACCCCCTC i nomLeu3.chr13 I 204 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351724 196 + 96509753 T a score=43865.000000 s hg38.chr20_KI270870v1_alt 40507 38 + 183433 ACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTG s panTro5.chr20 66366874 38 + 66533130 ACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTG i panTro5.chr20 C 0 I 136 s panPan2.chr20 62046367 38 + 62195757 ACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434758 38 - 578057 ACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960201 38 - 110113093 ACTGTCCACCCTCAGGACCCATAGAGACCCCCTCACTG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351528 38 + 96509753 AGTGTCCAGCCTCATGTTCTGTAGAGATCCCCTCAGTG i macFas5.chr10 T 196 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=47155.000000 s hg38.chr20_KI270870v1_alt 40545 40 + 183433 TCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACC s panTro5.chr20 66367048 40 + 66533130 TCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACC i panTro5.chr20 I 136 C 0 s panPan2.chr20 62046405 40 + 62195757 TCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACT i panPan2.chr20 C 0 T 169 s gorGor5.CYUI01015848v1 434796 40 - 578057 TCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960239 40 - 110113093 TCCACCCTCCTGGCCTGCAGAGACCCCCTCACTGTCCACC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351566 40 + 96509753 TCCAGCCTCGTGTCCTGTAGAGACCACATCACCATCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=5120.000000 s hg38.chr20_KI270870v1_alt 40585 4 + 183433 CTCA s panTro5.chr20 66367088 4 + 66533130 CTCA i panTro5.chr20 C 0 T 263 s panPan2.chr20 62046276 4 + 62195757 CTCA i panPan2.chr20 T 169 C 0 s gorGor5.CYUI01015848v1 434836 4 - 578057 CTCA i gorGor5.CYUI01015848v1 C 0 T 135 s nomLeu3.chr13 109960279 4 - 110113093 CTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351606 4 + 96509753 CTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=823.000000 s hg38.chr20_KI270870v1_alt 40589 8 + 183433 TGTCCTAT- s panPan2.chr20 62046280 8 + 62195757 TGTCCTAT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434705 8 - 578057 TGTCCTGT- i gorGor5.CYUI01015848v1 T 135 I 1 s nomLeu3.chr13 109960283 8 - 110113093 GGACCCAT- i nomLeu3.chr13 C 0 T 573 s macFas5.chr10 96351610 8 + 96509753 TGT-CTGTA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367092 263 + 66533130 T e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=33586.000000 s hg38.chr20_KI270870v1_alt 40597 33 + 183433 GAGACCCCCTCACTCTCCACCCTCATGTCCTAT s panTro5.chr20 66366829 33 + 66533130 GAGACCCCCTCACTGTCCAACCTCATGGCCTGT i panTro5.chr20 T 263 C 0 s panPan2.chr20 62046288 33 + 62195757 GAGACCCCCTCACTGTCCACTCTCGTGTCCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434714 33 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTAT i gorGor5.CYUI01015848v1 I 1 T 134 s nomLeu3.chr13 109959718 33 - 110113093 GAGACCCCCTCAGTATCCACCCTCATGTCCCAT i nomLeu3.chr13 T 573 C 0 s macFas5.chr10 96351618 33 + 96509753 GAGACCACGTCACCGCCCAGCCTCGTGGCCTGG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=910.000000 s hg38.chr20_KI270870v1_alt 40630 1 + 183433 A s panTro5.chr20 66366862 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046321 1 + 62195757 A i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959751 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351651 1 + 96509753 A i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434747 134 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=21034.000000 s hg38.chr20_KI270870v1_alt 40631 21 + 183433 GAGACCCCCTCACTGTCCACT s panTro5.chr20 66366863 21 + 66533130 GAGACCCCCTCACTCTCCACC i panTro5.chr20 C 0 I 102 s panPan2.chr20 62046322 21 + 62195757 GAGACCCCCTCACTGTCCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434613 20 - 578057 GAGA-CCCCTCACTGTCCACT i gorGor5.CYUI01015848v1 T 134 C 0 s nomLeu3.chr13 109959752 21 - 110113093 GAGACCCCCTCACTGTCCACC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351652 21 + 96509753 GAGACCACGTCACCGCCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=24300.000000 s hg38.chr20_KI270870v1_alt 40652 22 + 183433 CTCATGTCCTATAGAGACCCCC s panTro5.chr20 66366986 22 + 66533130 CTCATGGCCTGTAGAGACCCCC i panTro5.chr20 I 102 C 0 s panPan2.chr20 62046343 22 + 62195757 CTCGTGTCCTGTAGAGACCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434633 22 - 578057 CTCATGTCCTGTAGAGACCCCC i gorGor5.CYUI01015848v1 C 0 T 34 s nomLeu3.chr13 109959773 22 - 110113093 CTCATGTCCCATAGAGACCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351673 22 + 96509753 CTCGTGGCCTGGAGAGACCACG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=62068.000000 s hg38.chr20_KI270870v1_alt 40674 55 + 183433 TCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACTCTCATGTCC s panTro5.chr20 66367008 55 + 66533130 TCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTCTCCACCCTCATGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046365 55 + 62195757 TCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 55 - 578057 TCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCC i gorGor5.CYUI01015848v1 T 34 C 0 s nomLeu3.chr13 109959795 55 - 110113093 TCAGTATCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGTCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351695 55 + 96509753 TCACCGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGGCC i macFas5.chr10 C 0 T 140 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=21769.000000 s hg38.chr20_KI270870v1_alt 40729 25 + 183433 TATAGAGACCCCCTCACTGTCCACC s panTro5.chr20 66367063 25 + 66533130 TGTAGAGACCCCCTCACTGTCCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046420 25 + 62195757 TGTAGAGACCCCCTCACTGTCCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434676 25 - 578057 TGTAGAGACCCCCTCACTGTCTACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959850 25 - 110113093 CATAGAGACCCCCTCACTGTCCACC i nomLeu3.chr13 C 0 I 315 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 140 + 96509753 T a score=1746.000000 s hg38.chr20_KI270870v1_alt 40754 3 + 183433 CTC s panTro5.chr20 66367088 3 + 66533130 CTC i panTro5.chr20 C 0 T 34 s panPan2.chr20 62046445 3 + 62195757 CTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434701 3 - 578057 CTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959875 315 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 140 + 96509753 T a score=14007.000000 s hg38.chr20_KI270870v1_alt 40757 29 + 183433 GTGTCCTATATAGACCCCCTCACTGTCCA s panTro5.chr20 66367057 29 + 66533130 ATGGCCTGTAGAGACCCCCTCACTGTCCA i panTro5.chr20 T 34 C 0 s panPan2.chr20 62046448 29 + 62195757 ATGTCCTGTAGAGACCCCCTCACTCTCCA i panPan2.chr20 C 0 T 155 s gorGor5.CYUI01015848v1 434704 29 - 578057 ATGTCCTGTAGAGACCCCCTCACTGTCCA i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959875 315 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 140 + 96509753 T a score=1484.000000 s hg38.chr20_KI270870v1_alt 40786 6 + 183433 CTCTCA s panTro5.chr20 66367086 6 + 66533130 CCCTCA i panTro5.chr20 C 0 T 331 s gorGor5.CYUI01015848v1 434733 6 - 578057 CCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046477 155 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959875 315 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 140 + 96509753 T a score=101.000000 s hg38.chr20_KI270870v1_alt 40792 8 + 183433 TGTCC-TAT s gorGor5.CYUI01015848v1 434739 8 - 578057 TGTCC-TAT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351610 8 + 96509753 TGTCTGTA- i macFas5.chr10 T 140 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046477 155 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367092 331 + 66533130 T e nomLeu3.chr13 109959875 315 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=5730.000000 s hg38.chr20_KI270870v1_alt 40800 4 + 183433 GAGA s panTro5.chr20 66366761 4 + 66533130 GAGA i panTro5.chr20 T 331 C 0 s panPan2.chr20 62046322 4 + 62195757 GAGA i panPan2.chr20 T 155 C 0 s gorGor5.CYUI01015848v1 434747 4 - 578057 GAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960190 4 - 110113093 GAGA i nomLeu3.chr13 I 315 C 0 s macFas5.chr10 96351618 4 + 96509753 GAGA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250767 395 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=110934.000000 s hg38.chr20_KI270870v1_alt 40804 76 + 183433 CCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGA-CCCCCTCA s panTro5.chr20 66366765 76 + 66533130 CCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTCTCCACCCTCAGGACCTGTAGAGA-CCCCCTCA i panTro5.chr20 C 0 I 170 s panPan2.chr20 62046326 76 + 62195757 CCCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGA-CCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434751 76 - 578057 CCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACTCTCATGTCCTGTAGAGA-CCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960194 76 - 110113093 CCCCCTCACTGTCCACCCTCAGGACCCATAGAGACCCCCTCACTGTCCACCCTCCTGGCCTGCAGAGA-CCCCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351622 76 + 96509753 CCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGA-CCACGTCA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250372 77 - 90373283 CCCCCCCAGTGTCCACCCTCATGTTCTGTAGCGATCCTCTCAGTGTCCAGCCTCATGGCCTGTAGAGACCCCCCTCA i chlSab2.chr2 T 395 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=20872.000000 s hg38.chr20_KI270870v1_alt 40880 13 + 183433 CTGTCCACTCTCA s panTro5.chr20 66367011 13 + 66533130 CTGTCCACTCTCA i panTro5.chr20 I 170 C 0 s panPan2.chr20 62046402 13 + 62195757 CTGTCCACCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434827 13 - 578057 CTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 T 203 s nomLeu3.chr13 109960270 13 - 110113093 CTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351698 13 + 96509753 CCGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250449 13 - 90373283 GTGTCCACCCTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=53887.000000 s hg38.chr20_KI270870v1_alt 40893 39 + 183433 TGTCCTATAGAGACCCCCTCACTGTCCACTCTCATGTCC s panTro5.chr20 66367024 39 + 66533130 TGGCCTATAGAGACCCCCTCACTCTCCACCCTCATGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046415 39 + 62195757 TGGCCTGTAGAGACCCCCTCACTGTCCACTCTCATGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434637 39 - 578057 TGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCC i gorGor5.CYUI01015848v1 T 203 C 0 s nomLeu3.chr13 109960283 38 - 110113093 GGACCCATAGAGACCCCCTCA-TGTCCACCCTCAGGACC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351711 39 + 96509753 TGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGGCC i macFas5.chr10 C 0 T 203 s chlSab2.chr2 90250462 39 - 90373283 TGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTCGTGTCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=30890.000000 s hg38.chr20_KI270870v1_alt 40932 28 + 183433 TATAGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66367063 28 + 66533130 TGTAGAGACCCCCTCACTGTCCACCCTC i panTro5.chr20 C 0 T 136 s panPan2.chr20 62046454 28 + 62195757 TGTAGAGACCCCCTCACTCTCCACCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434676 28 - 578057 TGTAGAGACCCCCTCACTGTCTACCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960321 27 - 110113093 TGCAGAGACCCCCTCA-TGTCCACCCTC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250501 28 - 90373283 TGTAGAGACCACGTCACCGTCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 203 + 96509753 T a score=4805.000000 s hg38.chr20_KI270870v1_alt 40960 6 + 183433 GTGTCC s panTro5.chr20 66366955 6 + 66533130 ATGTCC i panTro5.chr20 T 136 C 0 s panPan2.chr20 62046482 6 + 62195757 ATGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434704 6 - 578057 ATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960348 6 - 110113093 AGGACC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250529 6 - 90373283 GTGGCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 203 + 96509753 T a score=29440.000000 s hg38.chr20_KI270870v1_alt 40966 16 + 183433 TATAGAGACCCCCTCA s panTro5.chr20 66366961 16 + 66533130 TGTAGAGACCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046488 16 + 62195757 TGTAGAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434710 16 - 578057 TGTAGAGACCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960354 16 - 110113093 CATAGAGACCCCCTCA i nomLeu3.chr13 C 0 T 470 s macFas5.chr10 96351547 16 + 96509753 TGTAGAGATCCCCTCA i macFas5.chr10 T 203 C 0 s chlSab2.chr2 90250535 16 - 90373283 TGTAGAGACCCCCTCA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=19294.000000 s hg38.chr20_KI270870v1_alt 40982 13 + 183433 CTGTCCACCCTCA s panTro5.chr20 66366977 13 + 66533130 CTCTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046504 13 + 62195757 CTGTCCACCCTCA i panPan2.chr20 C 0 T 242 s gorGor5.CYUI01015848v1 434726 13 - 578057 CTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959900 13 - 110113093 CTGTCCACCCTCA i nomLeu3.chr13 T 470 C 0 s macFas5.chr10 96351563 13 + 96509753 GTGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250551 13 - 90373283 GTGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=8013.000000 s hg38.chr20_KI270870v1_alt 40995 8 + 183433 TGTCCTAT s panTro5.chr20 66366990 8 + 66533130 TGGCCTGT i panTro5.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 434739 8 - 578057 TGTCCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959913 8 - 110113093 TGTCCCAT i nomLeu3.chr13 C 0 I 1 s macFas5.chr10 96351576 8 + 96509753 TGTCCTGT i macFas5.chr10 C 0 I 1 s chlSab2.chr2 90250564 8 - 90373283 TGGCCTGT i chlSab2.chr2 C 0 T 55 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 242 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=13736.000000 s hg38.chr20_KI270870v1_alt 41003 17 + 183433 GAGACCCCCTCACTGTC s panTro5.chr20 66366999 17 + 66533130 GAGACCCCCTCACTGTC i panTro5.chr20 I 1 C 0 s gorGor5.CYUI01015848v1 434747 17 - 578057 GAGACCCCCTCACTGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959922 17 - 110113093 GAGACCCCCTCACTGTC i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96351585 17 + 96509753 GAGACCACATCACCATC i macFas5.chr10 I 1 I 10 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250572 55 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 242 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=1104.000000 s hg38.chr20_KI270870v1_alt 41020 3 + 183433 AAC s panTro5.chr20 66367016 3 + 66533130 CAC i panTro5.chr20 C 0 T 178 s gorGor5.CYUI01015848v1 434764 3 - 578057 CAC i gorGor5.CYUI01015848v1 C 0 T 146 s nomLeu3.chr13 109959939 3 - 110113093 CAC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250572 55 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 242 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351602 10 + 96509753 I a score=0.000000 s hg38.chr20_KI270870v1_alt 41023 1 + 183433 T e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250572 55 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 242 + 62195757 T e gorGor5.CYUI01015848v1 434767 146 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367019 178 + 66533130 T e nomLeu3.chr13 109959942 0 - 110113093 C e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351602 10 + 96509753 I a score=3196.000000 s hg38.chr20_KI270870v1_alt 41024 13 + 183433 TCTCATGTCCTAT s panPan2.chr20 62046275 13 + 62195757 TCTCATGTCCTAT i panPan2.chr20 T 242 C 0 s nomLeu3.chr13 109959942 13 - 110113093 CCTCATGTCCCAT i nomLeu3.chr13 C 0 I 415 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250572 55 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434767 146 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367019 178 + 66533130 T e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351602 10 + 96509753 I a score=882.000000 s hg38.chr20_KI270870v1_alt 41037 9 + 183433 GAGACCCCC s panPan2.chr20 62046288 9 + 62195757 GAGACCCCC i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250572 55 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434767 146 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367019 178 + 66533130 T e nomLeu3.chr13 109959955 415 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351602 10 + 96509753 I a score=436.000000 s hg38.chr20_KI270870v1_alt 41046 3 + 183433 TCC s panPan2.chr20 62046297 3 + 62195757 TCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 3 - 578057 TCA i gorGor5.CYUI01015848v1 T 146 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250572 55 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367019 178 + 66533130 T e nomLeu3.chr13 109959955 415 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351602 10 + 96509753 I a score=1000.000000 s hg38.chr20_KI270870v1_alt 41049 1 + 183433 C s panTro5.chr20 66366841 1 + 66533130 C i panTro5.chr20 T 178 C 0 s panPan2.chr20 62046300 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434624 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90250517 1 - 90373283 C i chlSab2.chr2 T 55 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959955 415 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351602 10 + 96509753 I a score=13402.000000 s hg38.chr20_KI270870v1_alt 41050 15 + 183433 TGTCCACCCTCATGG s panTro5.chr20 66366842 15 + 66533130 TGTCCAACCTCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046301 15 + 62195757 TGTCCACTCTCGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434625 15 - 578057 TGTCCACTCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960370 15 - 110113093 TGCCCACCCTCAGGA i nomLeu3.chr13 I 415 C 0 s chlSab2.chr2 90250518 15 - 90373283 CGTCCAGCCTCGTGG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351602 10 + 96509753 I a score=49285.000000 s hg38.chr20_KI270870v1_alt 41065 34 + 183433 CCTATAGAGACCCCCTCACTGTCCACCCTCATGG s panTro5.chr20 66366857 34 + 66533130 CCTGTAGAGACCCCCTCACTCTCCACCCTCATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046316 34 + 62195757 CCTGTAGAGACCCCCTCACTGTCCACTCTCGTGT i panPan2.chr20 C 0 I 102 s gorGor5.CYUI01015848v1 434640 34 - 578057 CCTGTAGAGACCCCCTCACTGTCCACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960385 33 - 110113093 CCCATAGAGACCCCCTCA-TGTCCACCCTCATGG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351612 34 + 96509753 TCTGTAGAGACCACGTCACCGCCCAGCCTCGTGG i macFas5.chr10 I 10 C 0 s chlSab2.chr2 90250533 34 - 90373283 CCTGTAGAGACCCCCTCAGTGTCCAGCCTCGTGG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=74463.000000 s hg38.chr20_KI270870v1_alt 41099 49 + 183433 CCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTATAGAGACCCCC s panTro5.chr20 66366891 49 + 66533130 CCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046452 49 + 62195757 CCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTGTAGAGACCCCC i panPan2.chr20 I 102 C 0 s gorGor5.CYUI01015848v1 434674 49 - 578057 CCTGTAGAGACCCCCTCACTGTCTACCCTCATGTCCTGTAGAGACCCCC i gorGor5.CYUI01015848v1 C 0 T 102 s nomLeu3.chr13 109960418 49 - 110113093 CCTGCAGAGACCCCCTCACTGTCCACCCTCAGGACCCATAGAGACCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351646 49 + 96509753 CCTGGAGAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250567 49 - 90373283 CCTGTAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCCCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=22460.000000 s hg38.chr20_KI270870v1_alt 41148 16 + 183433 TCACTGTCCACCCTCA s panTro5.chr20 66366940 16 + 66533130 TCACTGTCCACTCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046501 16 + 62195757 TCACTGTCCACCCTCA i panPan2.chr20 C 0 T 102 s gorGor5.CYUI01015848v1 434621 16 - 578057 TCACTGTCCACTCTCA i gorGor5.CYUI01015848v1 T 102 C 0 s nomLeu3.chr13 109960467 15 - 110113093 TCA-TGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351695 16 + 96509753 TCACCGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250616 16 - 90373283 TCAGTGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=27569.000000 s hg38.chr20_KI270870v1_alt 41164 18 + 183433 TGTCCTATAGAGACCCCC s panTro5.chr20 66366956 18 + 66533130 TGTCCTGTAGAGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046415 18 + 62195757 TGGCCTGTAGAGACCCCC i panPan2.chr20 T 102 C 0 s gorGor5.CYUI01015848v1 434637 18 - 578057 TGTCCTGTAGAGACCCCC i gorGor5.CYUI01015848v1 C 0 T 34 s nomLeu3.chr13 109960482 18 - 110113093 GGACCCATAGAGACCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351711 18 + 96509753 TGGCCTGTAGAGACCACG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250632 18 - 90373283 TGACCTGTAGAGACCCCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=4011.000000 s hg38.chr20_KI270870v1_alt 41182 2 + 183433 TC s panTro5.chr20 66366974 2 + 66533130 TC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046433 2 + 62195757 TC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 2 - 578057 TC i gorGor5.CYUI01015848v1 T 34 C 0 s nomLeu3.chr13 109960500 2 - 110113093 TC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351729 2 + 96509753 TC i macFas5.chr10 C 0 T 203 s chlSab2.chr2 90250650 2 - 90373283 TC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=34039.000000 s hg38.chr20_KI270870v1_alt 41184 34 + 183433 ACTGTCCACCCTCATGTCCTATAGAGACCCCCTC s panTro5.chr20 66366976 34 + 66533130 ACTCTCCACCCTCATGGCCTGTAGAGACCCCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046435 34 + 62195757 ACTGTCCACTCTCATGTCCTGTAGAGACCCCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434623 34 - 578057 ACTGTCCACTCTCATGTCCTGTAGAGACCCCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960502 33 - 110113093 A-TGCCCACCCTCAGGACCCATAGAGACCCCCTC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250652 34 - 90373283 AGTGTCCAGCCTCGTGGCCTGTAGAGACCACGTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351731 203 + 96509753 T a score=1911.000000 s hg38.chr20_KI270870v1_alt 41218 1 + 183433 A s panTro5.chr20 66367010 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046469 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434657 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960535 1 - 110113093 A i nomLeu3.chr13 C 0 T 636 s macFas5.chr10 96351528 1 + 96509753 A i macFas5.chr10 T 203 C 0 s chlSab2.chr2 90250686 1 - 90373283 A i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=71040.000000 s hg38.chr20_KI270870v1_alt 41219 46 + 183433 CTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66367011 46 + 66533130 CTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTCTCCACCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046470 46 + 62195757 CTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i panPan2.chr20 C 0 T 33 s gorGor5.CYUI01015848v1 434658 46 - 578057 CTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCTACCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959900 46 - 110113093 CTGTCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTC i nomLeu3.chr13 T 636 C 0 s macFas5.chr10 96351529 46 + 96509753 GTGTCCAGCCTCATGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250687 46 - 90373283 CTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACCATCCAGCCTC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=294.000000 s hg38.chr20_KI270870v1_alt 41265 1 + 183433 G s panTro5.chr20 66367057 1 + 66533130 A i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434704 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959946 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351575 1 + 96509753 G i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250733 1 - 90373283 G i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046516 33 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=54979.000000 s hg38.chr20_KI270870v1_alt 41266 34 + 183433 TGTCCTATAAAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66367058 34 + 66533130 TGGCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panTro5.chr20 C 0 T 639 s panPan2.chr20 62046483 34 + 62195757 TGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 T 33 T 93 s gorGor5.CYUI01015848v1 434705 34 - 578057 TGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959947 34 - 110113093 TGTCCCATAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351576 34 + 96509753 TGTCCTGTAGAGACCACATCACCATCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250734 34 - 90373283 TGGCCTGTAGAGACCCCCTCAGTGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=2179.000000 s hg38.chr20_KI270870v1_alt 41300 7 + 183433 TGTCCTA s gorGor5.CYUI01015848v1 434739 7 - 578057 TGTCCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959981 7 - 110113093 TGTCCCA i nomLeu3.chr13 C 0 I 78 s macFas5.chr10 96351610 6 + 96509753 TG-TCTG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250768 7 - 90373283 TGACCTG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 93 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367092 639 + 66533130 T e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=546.000000 s hg38.chr20_KI270870v1_alt 41307 1 + 183433 T s gorGor5.CYUI01015848v1 434746 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351616 1 + 96509753 T i macFas5.chr10 C 0 T 66 s chlSab2.chr2 90250775 1 - 90373283 T i chlSab2.chr2 C 0 T 334 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 93 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367092 639 + 66533130 T e nomLeu3.chr13 109959988 78 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=6591.000000 s hg38.chr20_KI270870v1_alt 41308 12 + 183433 GAGACCCCCTCA s panPan2.chr20 62046424 12 + 62195757 GAGACCCCCTCA i panPan2.chr20 T 93 C 0 s gorGor5.CYUI01015848v1 434747 12 - 578057 GAGACCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96351551 12 + 96509753 GAGATCCCCTCA i macFas5.chr10 T 66 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367092 639 + 66533130 T e nomLeu3.chr13 109959988 78 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=15247.000000 s hg38.chr20_KI270870v1_alt 41320 20 + 183433 CTGTCCACCCTCATGGCCTG s panPan2.chr20 62046436 20 + 62195757 CTGTCCACTCTCATGTCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434759 20 - 578057 CTGTCCACCCTCATGTCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960066 20 - 110113093 CTGTCCACCCTCATGGCCTG i nomLeu3.chr13 I 78 C 0 s macFas5.chr10 96351563 20 + 96509753 GTGTCCAGCCTCGTGTCCTG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367092 639 + 66533130 T e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=31960.000000 s hg38.chr20_KI270870v1_alt 41340 30 + 183433 AAGAGACCCCCTCACTGTCCACCCTCGTGT s panTro5.chr20 66366453 30 + 66533130 TAGAGACCCCCTCACTGTCCACTCTCGTGT i panTro5.chr20 T 639 C 0 s panPan2.chr20 62046456 30 + 62195757 TAGAGACCCCCTCACTCTCCACCCTCATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434779 30 - 578057 TAGAGACCCCCTCACTGTCCACTCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960086 30 - 110113093 CAGAGACCCCCTCACTGTCCACCCTCAGGA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351583 30 + 96509753 TAGAGACCACATCACCATCCAGCCTCGTGT i macFas5.chr10 C 0 T 92 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=4718.000000 s hg38.chr20_KI270870v1_alt 41370 6 + 183433 CCTATA s panTro5.chr20 66366483 6 + 66533130 CCTGTA i panTro5.chr20 C 0 I 71 s panPan2.chr20 62046486 6 + 62195757 CCTGTA i panPan2.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 434809 6 - 578057 CCTGTA i gorGor5.CYUI01015848v1 C 0 T 194 s nomLeu3.chr13 109960116 6 - 110113093 CCTGCA i nomLeu3.chr13 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351613 92 + 96509753 T a score=311.000000 s hg38.chr20_KI270870v1_alt 41376 2 + 183433 AA s panPan2.chr20 62046493 2 + 62195757 AG i panPan2.chr20 I 1 T 102 s nomLeu3.chr13 109960123 2 - 110113093 AG i nomLeu3.chr13 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434815 194 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366489 71 + 66533130 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351613 92 + 96509753 T a score=546.000000 s hg38.chr20_KI270870v1_alt 41378 1 + 183433 A s panTro5.chr20 66366560 1 + 66533130 A i panTro5.chr20 I 71 C 0 s panPan2.chr20 62046393 1 + 62195757 A i panPan2.chr20 T 102 C 0 s nomLeu3.chr13 109960125 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434815 194 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351613 92 + 96509753 T a score=5000.000000 s hg38.chr20_KI270870v1_alt 41379 5 + 183433 CCCCC s panTro5.chr20 66366561 5 + 66533130 CCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046394 5 + 62195757 CCCCC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109960126 5 - 110113093 CCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351521 5 + 96509753 CCCCC i macFas5.chr10 T 92 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434815 194 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=66816.000000 s hg38.chr20_KI270870v1_alt 41384 59 + 183433 TCACTGTCCACCCTCGTGTCCTATAGAGACCCCCTCACTGTCCACTCTCATGTCCTATA s panTro5.chr20 66366566 59 + 66533130 TCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTCTCCACCCTCATGGCCTGTA i panTro5.chr20 C 0 I 272 s panPan2.chr20 62046399 59 + 62195757 TCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCATGTCCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 59 - 578057 TCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTGTA i gorGor5.CYUI01015848v1 T 194 C 0 s nomLeu3.chr13 109960131 59 - 110113093 TCACTGTCCACCCTCATGGCCTGCAGAGACCCCCTCACTGTCCACCCTCCTGGCCTGCA i nomLeu3.chr13 C 0 T 302 s macFas5.chr10 96351526 59 + 96509753 CCAGTGTCCAGCCTCATGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=32355.000000 s hg38.chr20_KI270870v1_alt 41443 28 + 183433 GAGACCCCCTCACTGTCCCCCCTCGTGT s panTro5.chr20 66366897 28 + 66533130 GAGACCCCCTCACTGTCCACCCTCATGT i panTro5.chr20 I 272 C 0 s panPan2.chr20 62046458 28 + 62195757 GAGACCCCCTCACTCTCCACCCTCATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434680 28 - 578057 GAGACCCCCTCACTGTCTACCCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959888 28 - 110113093 GAGACCCCCTCACTGTCCACCCTCATGT i nomLeu3.chr13 T 302 C 0 s macFas5.chr10 96351585 28 + 96509753 GAGACCACATCACCATCCAGCCTCGTGT i macFas5.chr10 C 0 T 62 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=13193.000000 s hg38.chr20_KI270870v1_alt 41471 23 + 183433 CCTATAGAGACCCCCTCACTGTC s panTro5.chr20 66366925 11 + 66533130 CCTATAGAGAC------------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046486 23 + 62195757 CCTGTAGAGACCCCCTCACTGTC i panPan2.chr20 C 0 T 148 s gorGor5.CYUI01015848v1 434708 23 - 578057 CCTGTAGAGACCCCCTCACTGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959916 23 - 110113093 CCCATAGAGACCCCCTCACTGTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351613 62 + 96509753 T a score=214.000000 s hg38.chr20_KI270870v1_alt 41494 8 + 183433 AACTCTAA s gorGor5.CYUI01015848v1 434731 8 - 578057 CACCCTCA i gorGor5.CYUI01015848v1 C 0 T 54 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046509 148 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366936 0 + 66533130 C e nomLeu3.chr13 109959939 0 - 110113093 C e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351613 62 + 96509753 T a score=555.000000 s hg38.chr20_KI270870v1_alt 41502 40 + 183433 ATCCTATGAGACCCCCTCACTGTCCACTCTCATGTCCTAT s nomLeu3.chr13 109959939 16 - 110113093 ------------------------CACCCTCATGTCCCAT i nomLeu3.chr13 C 0 T 130 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046509 148 + 62195757 T e gorGor5.CYUI01015848v1 434739 54 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366936 0 + 66533130 C e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351613 62 + 96509753 T a score=-609.000000 s hg38.chr20_KI270870v1_alt 41542 5 + 183433 GAAA-A s macFas5.chr10 96351551 5 + 96509753 GAGAT- i macFas5.chr10 T 62 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250776 334 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046509 148 + 62195757 T e gorGor5.CYUI01015848v1 434739 54 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366936 0 + 66533130 C e nomLeu3.chr13 109959955 130 - 110113093 T e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=70436.000000 s hg38.chr20_KI270870v1_alt 41547 44 + 183433 CCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTG s panTro5.chr20 66366936 44 + 66533130 CCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046361 44 + 62195757 CCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTG i panPan2.chr20 T 148 C 0 s gorGor5.CYUI01015848v1 434685 44 - 578057 CCCCTCACTGTCTACCCTCATGTCCTGTAGAGACCCCCTCACTG i gorGor5.CYUI01015848v1 T 54 C 0 s nomLeu3.chr13 109959825 44 - 110113093 CCCCTCACTGTCCACCCTCATGTCCCATAGAGACCCCCTCACTG i nomLeu3.chr13 T 130 C 0 s macFas5.chr10 96351556 44 + 96509753 CCCCTCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACATCACCA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250442 44 - 90373283 CCCCTCAGTGTCCACCCTCATGTTCTGTAGAGATCCCCTCAGTG i chlSab2.chr2 T 334 I 19 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=7605.000000 s hg38.chr20_KI270870v1_alt 41591 6 + 183433 TCCACC s panTro5.chr20 66366980 6 + 66533130 TCCACC i panTro5.chr20 C 0 T 191 s panPan2.chr20 62046405 6 + 62195757 TCCACC i panPan2.chr20 C 0 T 135 s gorGor5.CYUI01015848v1 434729 6 - 578057 TCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959869 6 - 110113093 TCCACC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351600 6 + 96509753 TCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250486 19 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=5246.000000 s hg38.chr20_KI270870v1_alt 41597 12 + 183433 CTCATGGCC-TAT s panPan2.chr20 62046276 12 + 62195757 CTCATGTCC-TAT i panPan2.chr20 T 135 C 0 s gorGor5.CYUI01015848v1 434735 12 - 578057 CTCATGTCC-TAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959875 12 - 110113093 CTCATGTCC-CAT i nomLeu3.chr13 C 0 T 203 s macFas5.chr10 96351606 12 + 96509753 CTCGTGTCTGTA- i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250486 19 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366986 191 + 66533130 T e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=103905.000000 s hg38.chr20_KI270870v1_alt 41609 71 + 183433 GAGACCCCCTCACTCTCCACCCTCATGGCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAG s panTro5.chr20 66366795 71 + 66533130 GAGACCCCCTCACTCTCCACCCTCAGGACCTGTAGAGACCCCCTCACTGTCCAACCTCATGGCCTGTAGAG i panTro5.chr20 T 191 C 0 s panPan2.chr20 62046288 71 + 62195757 GAGACCCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTGTCCACTCTCGTGTCCTGTAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434747 71 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACTCTCATGTCCTGTAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959684 71 - 110113093 GAGACCCCCTCAGTGTCCACCCTCATGTCCCATAGAGACCCCCTCAGTATCCACCCTCATGTCCCATAGAG i nomLeu3.chr13 T 203 C 0 s macFas5.chr10 96351618 71 + 96509753 GAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250505 71 - 90373283 GAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCCCCTCAGTGTCCAGCCTCGTGGCCTGTAGAG i chlSab2.chr2 I 19 T 90 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=1795.000000 s hg38.chr20_KI270870v1_alt 41680 2 + 183433 TC s panTro5.chr20 66366866 2 + 66533130 AC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046359 2 + 62195757 AC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434818 2 - 578057 AC i gorGor5.CYUI01015848v1 C 0 T 203 s nomLeu3.chr13 109959755 2 - 110113093 AC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351689 2 + 96509753 AC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250576 90 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=9765.000000 s hg38.chr20_KI270870v1_alt 41682 10 + 183433 CCCCTCACTC s panTro5.chr20 66366868 10 + 66533130 CCCCTCACTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046361 10 + 62195757 CCCCTCACTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434617 10 - 578057 CCCCTCACTG i gorGor5.CYUI01015848v1 T 203 C 0 s nomLeu3.chr13 109959757 10 - 110113093 CCCCTCACTG i nomLeu3.chr13 C 0 T 34 s macFas5.chr10 96351691 10 + 96509753 CACGTCACCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250576 90 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=79756.000000 s hg38.chr20_KI270870v1_alt 41692 49 + 183433 TCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCC s panTro5.chr20 66366878 49 + 66533130 TCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046371 49 + 62195757 TCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434627 49 - 578057 TCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959733 49 - 110113093 TCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGTCC i nomLeu3.chr13 T 34 C 0 s macFas5.chr10 96351701 49 + 96509753 TCCAGCCTCGTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGGCC i macFas5.chr10 C 0 T 136 s chlSab2.chr2 90250486 49 - 90373283 TCCAGCCTCGTGTCCTGTAGAGACCACGTCACCGTCCAGCCTCGTGGCC i chlSab2.chr2 T 90 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=1049.000000 s hg38.chr20_KI270870v1_alt 41741 2 + 183433 TA s panTro5.chr20 66366927 2 + 66533130 TA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046420 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434676 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959782 2 - 110113093 CA i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250535 2 - 90373283 TG i chlSab2.chr2 C 0 I 68 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 136 + 96509753 T a score=39273.000000 s hg38.chr20_KI270870v1_alt 41743 32 + 183433 TAGAGACCCCCTCACTGTCCACCCTCATGTCC s panTro5.chr20 66366929 32 + 66533130 TAGAGACCCCCTCACTGTCCACTCTCATGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046422 32 + 62195757 TAGAGACCCCCTCACTGTCCACTCTCATGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434678 32 - 578057 TAGAGACCCCCTCACTGTCTACCCTCATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959784 32 - 110113093 TAGAGACCCCCTCAGTATCCACCCTCATGTCC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250605 32 - 90373283 TAGAGACCCCCTCAGTGTCCAGCCTCGTGACC i chlSab2.chr2 I 68 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 136 + 96509753 T a score=1960.000000 s hg38.chr20_KI270870v1_alt 41775 2 + 183433 TA s panTro5.chr20 66366961 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046454 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434710 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959816 2 - 110113093 CA i nomLeu3.chr13 C 0 I 168 s macFas5.chr10 96351614 2 + 96509753 TG i macFas5.chr10 T 136 C 0 s chlSab2.chr2 90250637 2 - 90373283 TG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=32964.000000 s hg38.chr20_KI270870v1_alt 41777 23 + 183433 TAGAGACCCCCTCACTGTCCACC s panTro5.chr20 66366963 23 + 66533130 TAGAGACCCCCTCACTCTCCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046456 23 + 62195757 TAGAGACCCCCTCACTCTCCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434712 23 - 578057 TAGAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 C 0 T 34 s nomLeu3.chr13 109959986 22 - 110113093 CAGAGAccccctca-tgtccacc i nomLeu3.chr13 I 168 C 0 s macFas5.chr10 96351616 23 + 96509753 TAGAGACCACGTCACCGCCCAGC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250639 23 - 90373283 TAGAGACCCCCTCAGTGTCCAGC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=56561.000000 s hg38.chr20_KI270870v1_alt 41800 38 + 183433 CTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366986 38 + 66533130 CTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046479 38 + 62195757 CTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 C 0 T 102 s gorGor5.CYUI01015848v1 434701 38 - 578057 CTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 T 34 C 0 s nomLeu3.chr13 109960008 37 - 110113093 ctcatgtcccatagagaccccctca-tgtccaccctca i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351639 38 + 96509753 CTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250662 38 - 90373283 CTCGTGGCCTGTAGAGACCACGTCACTGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=10050.000000 s hg38.chr20_KI270870v1_alt 41838 8 + 183433 TGTCCTAT s panTro5.chr20 66367024 8 + 66533130 TGGCCTAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046415 8 + 62195757 TGGCCTGT i panPan2.chr20 T 102 C 0 s gorGor5.CYUI01015848v1 434739 8 - 578057 TGTCCTAT i gorGor5.CYUI01015848v1 C 0 T 68 s nomLeu3.chr13 109960045 8 - 110113093 tgtcccAT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351677 8 + 96509753 TGGCCTGG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250700 8 - 90373283 TGGCCTGT i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=55336.000000 s hg38.chr20_KI270870v1_alt 41846 35 + 183433 AGAGACCCCCTCACTGTCCACCCTCATGGCCTGTA s panTro5.chr20 66367032 35 + 66533130 AGAGACCCCCTCACTCTCCACCCTCATGGCCTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046423 35 + 62195757 AGAGACCCCCTCACTGTCCACTCTCATGTCCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434679 35 - 578057 AGAGACCCCCTCACTGTCTACCCTCATGTCCTGTA i gorGor5.CYUI01015848v1 T 68 C 0 s nomLeu3.chr13 109960053 35 - 110113093 AGAGACCCCCTCACTGTCCACCCTCATGGCCTGCA i nomLeu3.chr13 C 0 T 166 s macFas5.chr10 96351685 35 + 96509753 AGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250708 35 - 90373283 AGAGACCACGTCACCATCCAGCCTCGTGGCCTGTA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=35193.000000 s hg38.chr20_KI270870v1_alt 41881 21 + 183433 GAGACCCCCTCACTGTCCACC s panTro5.chr20 66367067 21 + 66533130 GAGACCCCCTCACTGTCCACC i panTro5.chr20 C 0 T 238 s panPan2.chr20 62046458 21 + 62195757 GAGACCCCCTCACTCTCCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434714 21 - 578057 GAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959922 21 - 110113093 GAGACCCCCTCACTGTCCACC i nomLeu3.chr13 T 166 C 0 s macFas5.chr10 96351720 21 + 96509753 GAGACCACGTCACTGTCCAGC i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250743 21 - 90373283 GAGACCCCCTCAGTGTCCAGC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=13976.000000 s hg38.chr20_KI270870v1_alt 41902 9 + 183433 CTCGTGTCC s panTro5.chr20 66366850 9 + 66533130 CTCATGGCC i panTro5.chr20 T 238 C 0 s panPan2.chr20 62046479 9 + 62195757 CTCATGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434735 9 - 578057 CTCATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959943 9 - 110113093 CTCATGTCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351741 9 + 96509753 CTCGTGGCC i macFas5.chr10 C 0 T 137 s chlSab2.chr2 90250764 9 - 90373283 CTCGTGACC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=2414.000000 s hg38.chr20_KI270870v1_alt 41911 3 + 183433 TAT s panTro5.chr20 66366859 3 + 66533130 TGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046488 3 + 62195757 TGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434744 3 - 578057 TAT i gorGor5.CYUI01015848v1 C 0 T 130 s nomLeu3.chr13 109959952 3 - 110113093 CAT i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250773 3 - 90373283 TGT i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 137 + 96509753 T a score=6730.000000 s hg38.chr20_KI270870v1_alt 41914 7 + 183433 AGAGACC s panTro5.chr20 66366862 7 + 66533130 AGAGACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046491 7 + 62195757 AGAGACC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959955 7 - 110113093 AGAGACC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250776 7 - 90373283 AGAGACC i chlSab2.chr2 C 0 T 312 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434747 130 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 137 + 96509753 T a score=8655.000000 s hg38.chr20_KI270870v1_alt 41921 16 + 183433 CCCTCACTGTCCACCC s panTro5.chr20 66366869 16 + 66533130 CCCTCACTCTCCACCC i panTro5.chr20 C 0 I 12 s panPan2.chr20 62046498 16 + 62195757 CCCTCACTGTCCACCC i panPan2.chr20 C 0 T 225 s nomLeu3.chr13 109959962 16 - 110113093 CCCTCACTGTCCACCC i nomLeu3.chr13 C 0 I 392 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434747 130 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 137 + 96509753 T a score=0.000000 s hg38.chr20_KI270870v1_alt 41937 2 + 183433 GG e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046514 225 + 62195757 T e gorGor5.CYUI01015848v1 434747 130 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366885 12 + 66533130 I e nomLeu3.chr13 109959978 392 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 137 + 96509753 T a score=220.000000 s hg38.chr20_KI270870v1_alt 41939 5 + 183433 CCATA s macFas5.chr10 96351613 5 + 96509753 CTGTA i macFas5.chr10 T 137 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046514 225 + 62195757 T e gorGor5.CYUI01015848v1 434747 130 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366885 12 + 66533130 I e nomLeu3.chr13 109959978 392 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=-150.000000 s hg38.chr20_KI270870v1_alt 41944 1 + 183433 C s panTro5.chr20 66366897 1 + 66533130 G i panTro5.chr20 I 12 C 0 s macFas5.chr10 96351618 1 + 96509753 G i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046514 225 + 62195757 T e gorGor5.CYUI01015848v1 434747 130 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959978 392 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=2292.000000 s hg38.chr20_KI270870v1_alt 41945 4 + 183433 AGAC s panTro5.chr20 66366898 4 + 66533130 AGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046289 4 + 62195757 AGAC i panPan2.chr20 T 225 C 0 s macFas5.chr10 96351619 4 + 96509753 AGAC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434747 130 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959978 392 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=6064.000000 s hg38.chr20_KI270870v1_alt 41949 8 + 183433 CCCCTCAC s panTro5.chr20 66366902 8 + 66533130 CCCCTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046293 8 + 62195757 CCCCTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434617 8 - 578057 CCCCTCAC i gorGor5.CYUI01015848v1 T 130 C 0 s macFas5.chr10 96351623 8 + 96509753 CACGTCAC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109959978 392 - 110113093 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=34422.000000 s hg38.chr20_KI270870v1_alt 41957 33 + 183433 TGTCCACCCTCGTGTCCTACAGAGACCCCCTCA s panTro5.chr20 66366910 33 + 66533130 TGTCCACCCTCATGTCCTATAGAGACCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046301 33 + 62195757 TGTCCACTCTCGTGTCCTGTAGAGACCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434625 33 - 578057 TGTCCACTCTCATGTCCTGTAGAGACCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960370 33 - 110113093 TGCCCACCCTCAGGACCCATAGAGACCCCCTCA i nomLeu3.chr13 I 392 T 503 s macFas5.chr10 96351631 33 + 96509753 CGCCCAGCCTCGTGGCCTGGAGAGACCACGTCA i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=21710.000000 s hg38.chr20_KI270870v1_alt 41990 20 + 183433 CTGTCCACTCTCATGTCCTA s panTro5.chr20 66366943 20 + 66533130 CTGTCCACTCTCATGTCCTG i panTro5.chr20 C 0 I 34 s panPan2.chr20 62046334 20 + 62195757 CTGTCCACTCTCGTGTCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434658 20 - 578057 CTGTCCACCCTCATGTCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959900 20 - 110113093 CTGTCCACCCTCATGTCCCA i nomLeu3.chr13 T 503 C 0 s macFas5.chr10 96351664 20 + 96509753 CCGCCCAGCCTCGTGGCCTG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=30658.000000 s hg38.chr20_KI270870v1_alt 42010 27 + 183433 TAGAGACCCCCTCACTGTCCACCCTCG s panTro5.chr20 66366997 27 + 66533130 TAGAGACCCCCTCACTGTCCACTCTCA i panTro5.chr20 I 34 C 0 s panPan2.chr20 62046354 27 + 62195757 TAGAGACCCCCTCACTCTCCACCCTCA i panPan2.chr20 C 0 I 68 s gorGor5.CYUI01015848v1 434678 27 - 578057 TAGAGACCCCCTCACTGTCTACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959920 27 - 110113093 TAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351684 27 + 96509753 GAGAGACCACGTCACCGTCCAGCCTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=45532.000000 s hg38.chr20_KI270870v1_alt 42037 39 + 183433 TGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCC s panTro5.chr20 66367024 39 + 66533130 TGGCCTATAGAGACCCCCTCACTCTCCACCCTCATGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046449 39 + 62195757 TGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCC i panPan2.chr20 I 68 C 0 s gorGor5.CYUI01015848v1 434705 39 - 578057 TGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959947 39 - 110113093 TGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGTCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351711 39 + 96509753 TGGCCTGTAGAGACCACGTCACTGTCCAGCCTCGTGGCC i macFas5.chr10 C 0 T 212 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=609.000000 s hg38.chr20_KI270870v1_alt 42076 2 + 183433 TA s panTro5.chr20 66367063 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046488 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434744 2 - 578057 TA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959986 2 - 110113093 CA i nomLeu3.chr13 C 0 T 102 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 212 + 96509753 T a score=910.000000 s hg38.chr20_KI270870v1_alt 42078 1 + 183433 T s panTro5.chr20 66367065 1 + 66533130 T i panTro5.chr20 C 0 T 203 s panPan2.chr20 62046490 1 + 62195757 T i panPan2.chr20 C 0 T 217 s gorGor5.CYUI01015848v1 434746 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959886 1 - 110113093 T i nomLeu3.chr13 T 102 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 212 + 96509753 T a score=5083.000000 s hg38.chr20_KI270870v1_alt 42079 19 + 183433 GAGACCCCCTCACTGTCAA s gorGor5.CYUI01015848v1 434747 19 - 578057 GAGACCCCCTCACTGTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959888 19 - 110113093 GAGACCCCCTCACTGTCCA i nomLeu3.chr13 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046491 217 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367066 203 + 66533130 T e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 212 + 96509753 T a score=6757.000000 s hg38.chr20_KI270870v1_alt 42098 14 + 183433 CTCTCATGTCCTAT s panPan2.chr20 62046274 14 + 62195757 CTCTCATGTCCTAT i panPan2.chr20 T 217 C 0 s gorGor5.CYUI01015848v1 434766 14 - 578057 CCCTCATGTCCTGT i gorGor5.CYUI01015848v1 C 0 T 134 s nomLeu3.chr13 109959907 14 - 110113093 CCCTCATGTCCCAT i nomLeu3.chr13 C 0 T 33 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367066 203 + 66533130 T e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 212 + 96509753 T a score=18675.000000 s hg38.chr20_KI270870v1_alt 42112 21 + 183433 GAGACCCCCTCACTGTCCACT s panTro5.chr20 66366863 21 + 66533130 GAGACCCCCTCACTCTCCACC i panTro5.chr20 T 203 C 0 s panPan2.chr20 62046288 21 + 62195757 GAGACCCCCTCACTGTCCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434646 21 - 578057 GAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 T 134 C 0 s nomLeu3.chr13 109959888 21 - 110113093 GAGACCCCCTCACTGTCCACC i nomLeu3.chr13 T 33 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 212 + 96509753 T a score=80902.000000 s hg38.chr20_KI270870v1_alt 42133 66 + 183433 CTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCA s panTro5.chr20 66366884 66 + 66533130 CTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCA i panTro5.chr20 C 0 T 393 s panPan2.chr20 62046309 66 + 62195757 CTCGTGTCCTGTAGAGACCCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTCTCCA i panPan2.chr20 C 0 T 53 s gorGor5.CYUI01015848v1 434667 66 - 578057 CTCATGTCCTGTAGAGACCCCCTCACTGTCTACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959909 66 - 110113093 CTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351538 66 + 96509753 CTCATGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACATCACCATCCA i macFas5.chr10 T 212 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=2364.000000 s hg38.chr20_KI270870v1_alt 42199 14 + 183433 CTCTCATGTCC-TAT s gorGor5.CYUI01015848v1 434733 14 - 578057 CCCTCATGTCC-TAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959975 13 - 110113093 CCCTCATGTCC-CA- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351604 14 + 96509753 GCCTCGTGTCTGTA- i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250783 312 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046375 53 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366950 393 + 66533130 T e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=138287.000000 s hg38.chr20_KI270870v1_alt 42213 93 + 183433 GAGACCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCA s panTro5.chr20 66366557 93 + 66533130 GAGACCCCCTCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACTCTCA i panTro5.chr20 T 393 C 0 s panPan2.chr20 62046322 93 + 62195757 GAGACCCCCTCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 T 53 C 0 s gorGor5.CYUI01015848v1 434747 93 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 T 203 s nomLeu3.chr13 109959988 91 - 110113093 GAGAccccctca-tgtccaccctcatgtcccatagagaccccctca-tgtccaccctcatgtcccATAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351618 93 + 96509753 GAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGTCCAGCCTCG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250471 93 - 90373283 GAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCCCCTCAGTGTCCAGCCTCG i chlSab2.chr2 T 312 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=13944.000000 s hg38.chr20_KI270870v1_alt 42306 9 + 183433 TGTCCTATA s panTro5.chr20 66366650 9 + 66533130 TGGCCTATA i panTro5.chr20 C 0 T 68 s panPan2.chr20 62046415 9 + 62195757 TGGCCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434637 9 - 578057 TGTCCTGTA i gorGor5.CYUI01015848v1 T 203 C 0 s nomLeu3.chr13 109960079 9 - 110113093 TGGCCTGCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351711 9 + 96509753 TGGCCTGTA i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90250564 9 - 90373283 TGGCCTGTA i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=45604.000000 s hg38.chr20_KI270870v1_alt 42315 30 + 183433 GAGACCCCCTCACTGTCCACTCTCATGTCC s panTro5.chr20 66366591 30 + 66533130 GAGACCCCCTCACTCTCCACCCTCATGGCC i panTro5.chr20 T 68 C 0 s panPan2.chr20 62046424 30 + 62195757 GAGACCCCCTCACTGTCCACTCTCATGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434646 30 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960088 30 - 110113093 GAGACCCCCTCACTGTCCACCCTCAGGACC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351720 30 + 96509753 GAGACCACGTCACTGTCCAGCCTCGTGGCC i macFas5.chr10 C 0 T 222 s chlSab2.chr2 90250573 30 - 90373283 GAGACCACGTCACCGTCCAGCCTCGTGGCC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=76525.000000 s hg38.chr20_KI270870v1_alt 42345 63 + 183433 TATAGAGACCCCCTCACTGTCCACCCTCGTGTCCTATAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366621 63 + 66533130 TGTAGAGACCCCCTCACTGTCCACTCTCATGGCCTATAGAGACCCCCTCACTGTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046454 63 + 62195757 TGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panPan2.chr20 C 0 T 161 s gorGor5.CYUI01015848v1 434676 63 - 578057 TGTAGAGACCCCCTCACTGTCTACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960118 63 - 110113093 TGCAGAGACCCCCTCACTGTCCACCCTCATGGCCTGCAGAGACCCCCTCACTGTCCACCCTCC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250603 63 - 90373283 TGTAGAGACCCCCTCAGTGTCCAGCCTCGTGACCTGTAGAGACCCCCTCAGTGTCCAGCCTCG i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 222 + 96509753 T a score=5154.000000 s hg38.chr20_KI270870v1_alt 42408 8 + 183433 TGTCCTAT s panTro5.chr20 66366684 8 + 66533130 TGGCCTGT i panTro5.chr20 C 0 I 307 s gorGor5.CYUI01015848v1 434739 8 - 578057 TGTCCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960181 8 - 110113093 TGGCCTGC i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90250666 8 - 90373283 TGGCCTGT i chlSab2.chr2 C 0 T 135 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 161 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 222 + 96509753 T a score=207.000000 s hg38.chr20_KI270870v1_alt 42416 1 + 183433 G s panTro5.chr20 66366999 1 + 66533130 G i panTro5.chr20 I 307 C 0 s gorGor5.CYUI01015848v1 434747 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960189 1 - 110113093 A i nomLeu3.chr13 C 0 T 267 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 161 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 222 + 96509753 T a score=15922.000000 s hg38.chr20_KI270870v1_alt 42417 32 + 183433 AGACCCCCTCACTGTCAACTCTCATGTCCTAT s panTro5.chr20 66367000 32 + 66533130 AGACCCCCTCACTGTCCACTCTCATGGCCTAT i panTro5.chr20 C 0 T 271 s gorGor5.CYUI01015848v1 434748 32 - 578057 AGACCCCCTCACTGTCCACCCTCATGTCCTGT i gorGor5.CYUI01015848v1 C 0 T 33 s nomLeu3.chr13 109959923 32 - 110113093 AGACCCCCTCACTGTCCACCCTCATGTCCCAT i nomLeu3.chr13 T 267 T 101 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046517 161 + 62195757 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 222 + 96509753 T a score=10730.000000 s hg38.chr20_KI270870v1_alt 42449 11 + 183433 GAGACCCCCTC s panTro5.chr20 66366761 11 + 66533130 GAGACCCCCTC i panTro5.chr20 T 271 C 0 s panPan2.chr20 62046356 11 + 62195757 GAGACCCCCTC i panPan2.chr20 T 161 C 0 s gorGor5.CYUI01015848v1 434747 11 - 578057 GAGACCCCCTC i gorGor5.CYUI01015848v1 T 33 C 0 s nomLeu3.chr13 109959854 11 - 110113093 GAGACCCCCTC i nomLeu3.chr13 T 101 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I e macFas5.chr10 96351750 222 + 96509753 T a score=57775.000000 s hg38.chr20_KI270870v1_alt 42460 51 + 183433 ACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCATGG s panTro5.chr20 66366772 51 + 66533130 ACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTCTCCACCCTCAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046367 51 + 62195757 ACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434758 51 - 578057 ACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACTCTCATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959865 51 - 110113093 ACTGTCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACCCTCATGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96351528 51 + 96509753 AGTGTCCAGCCTCATGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTCGTGT i macFas5.chr10 T 222 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689075 440 - 92844088 T e otoGar3.GL873542 159957 0 - 22939663 I a score=6693.000000 s hg38.chr20_KI270870v1_alt 42511 4 + 183433 CCTG s panTro5.chr20 66366823 4 + 66533130 CCTG i panTro5.chr20 C 0 I 70 s panPan2.chr20 62046418 4 + 62195757 CCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434809 4 - 578057 CCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959916 4 - 110113093 CCCA i nomLeu3.chr13 C 0 T 68 s rheMac8.chr10 92688635 4 - 92844088 CCTG i rheMac8.chr10 T 440 C 0 s macFas5.chr10 96351579 4 + 96509753 CCTG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=27445.000000 s hg38.chr20_KI270870v1_alt 42515 23 + 183433 TAGAGACCCCCTCACTGTCCACC s panPan2.chr20 62046422 23 + 62195757 TAGAGACCCCCTCACTGTCCACT i panPan2.chr20 C 0 T 169 s gorGor5.CYUI01015848v1 434813 23 - 578057 TAGAGACCCCCTCACTGTCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959852 23 - 110113093 TAGAGACCCCCTCACTGTCCACC i nomLeu3.chr13 T 68 C 0 s rheMac8.chr10 92688639 23 - 92844088 TAGAGACCCCCTCACTGTTCACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351583 23 + 96509753 TAGAGACCACATCACCATCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366827 70 + 66533130 I e otoGar3.GL873542 159957 0 - 22939663 I a score=4108.000000 s hg38.chr20_KI270870v1_alt 42538 4 + 183433 CTCA s panPan2.chr20 62046276 4 + 62195757 CTCA i panPan2.chr20 T 169 C 0 s gorGor5.CYUI01015848v1 434836 4 - 578057 CTCA i gorGor5.CYUI01015848v1 C 0 T 219 s nomLeu3.chr13 109959875 4 - 110113093 CTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688662 4 - 92844088 CTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351606 4 + 96509753 CTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366827 70 + 66533130 I e otoGar3.GL873542 159957 0 - 22939663 I a score=4219.000000 s hg38.chr20_KI270870v1_alt 42542 8 + 183433 TGTCCTAT s panPan2.chr20 62046280 8 + 62195757 TGTCCTAT i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959879 8 - 110113093 TGTCCCAT i nomLeu3.chr13 C 0 T 101 s rheMac8.chr10 92688666 8 - 92844088 TGTCCTGT i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96351610 7 + 96509753 TGT-CTGT i macFas5.chr10 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434840 219 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366827 70 + 66533130 I e otoGar3.GL873542 159957 0 - 22939663 I a score=11035.000000 s hg38.chr20_KI270870v1_alt 42550 9 + 183433 GAGACCCCC s panTro5.chr20 66366897 9 + 66533130 GAGACCCCC i panTro5.chr20 I 70 C 0 s panPan2.chr20 62046288 9 + 62195757 GAGACCCCC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109959786 9 - 110113093 GAGACCCCC i nomLeu3.chr13 T 101 C 0 s rheMac8.chr10 92688675 9 - 92844088 GAGACCCCC i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96351618 9 + 96509753 GAGACCACG i macFas5.chr10 I 1 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e gorGor5.CYUI01015848v1 434840 219 - 578057 T e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=42645.000000 s hg38.chr20_KI270870v1_alt 42559 34 + 183433 TCAC--TCTCCACCCTCATGTCCTATAGAGACCCCC s panTro5.chr20 66366906 34 + 66533130 TCAC--TGTCCACCCTCATGTCCTATAGAGACCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046297 34 + 62195757 TCAC--TGTCCACTCTCGTGTCCTGTAGAGACCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 34 - 578057 TCAC--TGTCCACTCTCATGTCCTGTAGAGACCCCC i gorGor5.CYUI01015848v1 T 219 T 34 s nomLeu3.chr13 109959795 34 - 110113093 TCAG--TATCCACCCTCATGTCCCATAGAGACCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688684 36 - 92844088 CCCCAGTGTCCAGCCTCATGTTCTGTAGCAATCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351627 34 + 96509753 TCAC--CGCCCAGCCTCGTGGCCTGGAGAGACCACG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=120071.000000 s hg38.chr20_KI270870v1_alt 42593 80 + 183433 TCACTGTCCACTCTCATGTCCTATAGAGA-CCCCCTCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCAACT s panTro5.chr20 66366940 80 + 66533130 TCACTGTCCACTCTCATGTCCTGTAGAGA-CCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACT i panTro5.chr20 C 0 I 68 s panPan2.chr20 62046331 80 + 62195757 TCACTGTCCACTCTCGTGTCCTGTAGAGA-CCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 80 - 578057 TCACTGTCCACTCTCATGTCCTGTAGAGA-CCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCTACC i gorGor5.CYUI01015848v1 T 34 C 0 s nomLeu3.chr13 109959829 80 - 110113093 TCACTGTCCACCCTCATGTCCCATAGAGA-CCCCCTCACTGTCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACC i nomLeu3.chr13 C 0 T 34 s rheMac8.chr10 92688720 81 - 92844088 TCAGTGTCCAGCCTCATGGACTGTAGAGACCCCCCTCAGTGTCCACCCTCATGTTCTGTAGAGATCCCCTCAGTGTCCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351661 80 + 96509753 TCACCGCCCAGCCTCGTGGCCTGGAGAGA-CCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACTGTCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=6811.000000 s hg38.chr20_KI270870v1_alt 42673 4 + 183433 CTCA s panTro5.chr20 66367088 4 + 66533130 CTCA i panTro5.chr20 I 68 T 68 s panPan2.chr20 62046411 4 + 62195757 CTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434701 4 - 578057 CTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959875 4 - 110113093 CTCA i nomLeu3.chr13 T 34 C 0 s rheMac8.chr10 92688801 4 - 92844088 CTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351741 4 + 96509753 CTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=7689.000000 s hg38.chr20_KI270870v1_alt 42677 5 + 183433 TGTCC s panTro5.chr20 66367024 5 + 66533130 TGGCC i panTro5.chr20 T 68 C 0 s panPan2.chr20 62046415 5 + 62195757 TGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434705 5 - 578057 TGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959879 5 - 110113093 TGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688805 5 - 92844088 TGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351745 5 + 96509753 TGGCC i macFas5.chr10 C 0 T 203 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=5502.000000 s hg38.chr20_KI270870v1_alt 42682 4 + 183433 TATA s panTro5.chr20 66367029 4 + 66533130 TATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046420 4 + 62195757 TGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434710 4 - 578057 TGTA i gorGor5.CYUI01015848v1 C 0 I 33 s nomLeu3.chr13 109959884 4 - 110113093 CATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688810 4 - 92844088 TGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351547 4 + 96509753 TGTA i macFas5.chr10 T 203 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=81186.000000 s hg38.chr20_KI270870v1_alt 42686 55 + 183433 GAGACCCCCTCACTGTCCACCCTCGTGTCCTATAGAGACCCCCTCACTGTCCACT s panTro5.chr20 66367033 55 + 66533130 GAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046424 55 + 62195757 GAGACCCCCTCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTCTCCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434747 55 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACT i gorGor5.CYUI01015848v1 I 33 T 67 s nomLeu3.chr13 109959888 55 - 110113093 GAGACCCCCTCACTGTCCACCCTCATGTCCCATAGAGACCCCCTCACTGTCCACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688814 54 - 92844088 GAGACCACATCACCATCCAGCCTCGTGT-CTGTAGAGACCACGTCACCGCCCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351551 55 + 96509753 GAGATCCCCTCAGTGTCCAGCCTCGTGTCCTGTAGAGACCACATCACCATCCAGC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=6811.000000 s hg38.chr20_KI270870v1_alt 42741 4 + 183433 CTCA s panTro5.chr20 66367088 4 + 66533130 CTCA i panTro5.chr20 C 0 T 433 s panPan2.chr20 62046479 4 + 62195757 CTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434735 4 - 578057 CTCA i gorGor5.CYUI01015848v1 T 67 C 0 s nomLeu3.chr13 109959943 4 - 110113093 CTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688868 4 - 92844088 CTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351606 4 + 96509753 CTCG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=4708.000000 s hg38.chr20_KI270870v1_alt 42745 8 + 183433 TGTCCTAT s panPan2.chr20 62046483 8 + 62195757 TGTCCTGT i panPan2.chr20 C 0 T 203 s gorGor5.CYUI01015848v1 434739 8 - 578057 TGTCCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109959947 8 - 110113093 TGTCCCAT i nomLeu3.chr13 C 0 I 133 s rheMac8.chr10 92688872 8 - 92844088 TGGCCTGT i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96351610 7 + 96509753 T-GTCTGT i macFas5.chr10 C 0 I 1 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e chlSab2.chr2 90250674 135 - 90373283 T e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e macNem1.NW_012014244v1 16825879 0 - 16982598 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66367092 433 + 66533130 T e otoGar3.GL873542 159957 0 - 22939663 I a score=22157.000000 s hg38.chr20_KI270870v1_alt 42753 9 + 183433 GAGA-CCCCC s panTro5.chr20 66366659 9 + 66533130 GAGA-CCCCC i panTro5.chr20 T 433 C 0 s panPan2.chr20 62046288 9 + 62195757 GAGA-CCCCC i panPan2.chr20 T 203 C 0 s gorGor5.CYUI01015848v1 434747 9 - 578057 GAGA-CCCCC i gorGor5.CYUI01015848v1 C 0 T 135 s nomLeu3.chr13 109960088 9 - 110113093 GAGA-CCCCC i nomLeu3.chr13 I 133 C 0 s rheMac8.chr10 92688881 9 - 92844088 GAGA-CCACG i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96351618 9 + 96509753 GAGA-CCACG i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16825879 10 - 16982598 GAGACCCCCC i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90250539 9 - 90373283 GAGA-CCCCC i chlSab2.chr2 T 135 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=123905.000000 s hg38.chr20_KI270870v1_alt 42762 50 + 183433 TCACTGTCCACCCTCATGTCCTATAGAGACCCCCTCACTGTCCACCCTCA s panTro5.chr20 66366668 50 + 66533130 TCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046297 50 + 62195757 TCACTGTCCACTCTCGTGTCCTGTAGAGACCCCCTCACTGTCCACTCTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434621 50 - 578057 TCACTGTCCACTCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTCA i gorGor5.CYUI01015848v1 T 135 C 0 s nomLeu3.chr13 109960097 50 - 110113093 TCACTGTCCACCCTCAGGACCTGCAGAGACCCCCTCACTGTCCACCCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688890 50 - 92844088 TCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351627 50 + 96509753 TCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825889 50 - 16982598 TCAGTGTCCACCCTCATGTTCTGTAGAGATCCCCTCAGTGTCCAGCCTCG i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90250548 50 - 90373283 TCAGTGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACCGTCCAGCCTCG i chlSab2.chr2 C 0 T 34 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=173804.000000 s hg38.chr20_KI270870v1_alt 42812 67 + 183433 TGGCCTGTAGAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTC s panTro5.chr20 66366718 67 + 66533130 TGGCCTGTAGAGACCCCCTCACTCTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i panTro5.chr20 C 0 T 296 s panPan2.chr20 62046347 67 + 62195757 TGTCCTGTAGAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434671 67 - 578057 TGTCCTGTAGAGACCCCCTCACTGTCTACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960147 67 - 110113093 TGGCCTGCAGAGACCCCCTCACTGTCCACCCTCCTGGCCTGCAGAGACCCCCTCACTGTCCACCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92688940 67 - 92844088 TGGCCTGGAAAGACCACATCACCGTCCAGCCTCATGGCCTGTAGAGACCACGTCACCGTCCAGCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351677 67 + 96509753 TGGCCTGGAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACTGTCCAGCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16825939 66 - 16982598 TGTCCTGTAGAGACCACATCACCATCCAGCCTCGT-GTCTGTAGAGACCACGTCACCGCCCAGCCTC i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90250564 67 - 90373283 TGGCCTGTAGAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCCCCTCAGTGTCCAGCCTC i chlSab2.chr2 T 34 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 159957 0 - 22939663 I a score=9293.000000 s hg38.chr20_KI270870v1_alt 42879 6 + 183433 ATGTCC s panPan2.chr20 62046414 6 + 62195757 ATGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434738 6 - 578057 ATGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960214 6 - 110113093 AGGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689007 6 - 92844088 GTGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351744 6 + 96509753 GTGGCC i macFas5.chr10 C 0 T 134 s macNem1.NW_012014244v1 16826005 6 - 16982598 GTGGCC i macNem1.NW_012014244v1 C 0 I 2 s chlSab2.chr2 90250631 6 - 90373283 GTGACC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366785 296 + 66533130 T e otoGar3.GL873542 159957 0 - 22939663 I a score=3245.000000 s hg38.chr20_KI270870v1_alt 42885 3 + 183433 TAT s panPan2.chr20 62046420 3 + 62195757 TGT i panPan2.chr20 C 0 T 67 s gorGor5.CYUI01015848v1 434744 3 - 578057 TAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960220 3 - 110113093 CAT i nomLeu3.chr13 C 0 I 1 s rheMac8.chr10 92689013 1 - 92844088 --T i rheMac8.chr10 C 0 I 61 s macFas5.chr10 96351616 1 + 96509753 --T i macFas5.chr10 T 134 I 1 s macNem1.NW_012014244v1 16826013 1 - 16982598 --T i macNem1.NW_012014244v1 I 2 I 1 s chlSab2.chr2 90250637 3 - 90373283 TGT i chlSab2.chr2 C 0 I 239 s otoGar3.GL873542 22780860 3 + 22939663 tgt i otoGar3.GL873542 I 5355 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366785 296 + 66533130 T a score=118004.000000 s hg38.chr20_KI270870v1_alt 42888 58 + 183433 GAGACCCCCTCACTGTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCAT s panTro5.chr20 66366489 58 + 66533130 GAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTC i panTro5.chr20 T 296 I 238 s panPan2.chr20 62046356 58 + 62195757 GAGACCCCCTCACTCTCCACCCTCATGGCCTGTAGAGACCCCCTCACTGTCCACCCTC i panPan2.chr20 T 67 T 34 s gorGor5.CYUI01015848v1 434747 58 - 578057 GAGACCCCCTCACTGTCCACCCTCATGTCCTGTAGAGACCCCCTCACTGTCCACTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960224 58 - 110113093 GAGACCCCCTCACTGTCCACCCTCCTGGCCTGCAGAGACCCCCTCACTGTCCACCCTC i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96351618 58 + 96509753 GAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTC i macFas5.chr10 I 1 I 34 s macNem1.NW_012014244v1 16826015 58 - 16982598 GAGACCACGTCACCGCCCAGCCTCGTGGCCTGGAGAGACCACGTCACCGCCCAGCCTC i macNem1.NW_012014244v1 I 1 C 0 s chlSab2.chr2 90250879 58 - 90373283 GAGACCACGTCACCGTCCAGCCTCGTGGCCTGTAGAGACCACGTCACCGTCCAGCCTC i chlSab2.chr2 I 239 C 0 s otoGar3.GL873542 22780863 43 + 22939663 gGGACCCC--CACCCTCCCCTGTCCCAGCCTGTTCTGCCCCTCTC------------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689014 61 - 92844088 I a score=6721.000000 s hg38.chr20_KI270870v1_alt 42946 4 + 183433 ATGG s panTro5.chr20 66366785 4 + 66533130 ATGG i panTro5.chr20 I 238 C 0 s panPan2.chr20 62046380 4 + 62195757 ATGG i panPan2.chr20 T 34 C 0 s gorGor5.CYUI01015848v1 434805 4 - 578057 ATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960282 4 - 110113093 AGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689075 4 - 92844088 GTGG i rheMac8.chr10 I 61 C 0 s macFas5.chr10 96351710 4 + 96509753 GTGG i macFas5.chr10 I 34 C 0 s macNem1.NW_012014244v1 16826073 4 - 16982598 GTGG i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90250937 4 - 90373283 GTGG i chlSab2.chr2 C 0 C 0 s otoGar3.GL873542 22780906 3 + 22939663 -CAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e saiBol1.JH378156 16219452 0 + 16356641 C e cebCap1.NW_016107870v1 1084746 0 + 1231380 C e calJac3.chr5 58154286 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=78243.000000 s hg38.chr20_KI270870v1_alt 42950 18 + 183433 CCTGTAGAGACCCCCT-----CA s panTro5.chr20 66366789 18 + 66533130 CCTGTAGAGACCCCCT-----CA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046384 18 + 62195757 CCTGTAGAGACCCCCT-----CA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434809 18 - 578057 CCTGTAGAGACCCCCT-----CA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960286 18 - 110113093 CCCATAGAGACCCCCT-----CA i nomLeu3.chr13 C 0 I 232 s rheMac8.chr10 92689079 18 - 92844088 CCTGTAGAGACCACGT-----CA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351714 18 + 96509753 CCTGTAGAGACCACGT-----CA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826077 18 - 16982598 CCTGTAGAGACCACGT-----CA i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90250941 18 - 90373283 CCTGTAGAGACCACGT-----CA i chlSab2.chr2 C 0 C 0 s calJac3.chr5 58154286 23 + 159171411 CCTGTAGAGATCCCCCGCTCTCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219452 22 + 16356641 CCTGTAGAGAACCCCC-CCATCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084746 20 + 1231380 CCTGTAGAGACCCTCC---CTCA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22780909 17 + 22939663 TGTGCAGGGACCCC-T-----CA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=6600.000000 s hg38.chr20_KI270870v1_alt 42968 1 + 183433 C s panTro5.chr20 66366807 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046402 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434827 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689097 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351732 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826095 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90250959 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s calJac3.chr5 58154309 1 + 159171411 C i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219474 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084766 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22780926 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109960304 232 - 110113093 I a score=57019.000000 s hg38.chr20_KI270870v1_alt 42969 12 + 183433 TGTCCACCCTCA---------- s panTro5.chr20 66366808 12 + 66533130 TCTCCACCCTCA---------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62046403 12 + 62195757 TGTCCACCCTCA---------- i panPan2.chr20 C 0 I 697 s gorGor5.CYUI01015848v1 434828 12 - 578057 TGTCCACCCTCA---------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960536 12 - 110113093 TGTCCACCCTCA---------- i nomLeu3.chr13 I 232 C 0 s rheMac8.chr10 92689098 12 - 92844088 TGTCCAGCCTCG---------- i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96351733 12 + 96509753 TGTCCAGCCTCG---------- i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16826096 12 - 16982598 TGTCCAGCCTCG---------- i macNem1.NW_012014244v1 C 0 I 1 s chlSab2.chr2 90250960 12 - 90373283 CGTCCAGCCTCG---------- i chlSab2.chr2 C 0 I 1 s calJac3.chr5 58154310 12 + 159171411 TGTCCACCCTCG---------- i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16219475 12 + 16356641 TGTCCACCCTCA---------- i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1084767 12 + 1231380 TGTCCACCCTCA---------- i cebCap1.NW_016107870v1 C 0 I 1 s otoGar3.GL873542 22780927 22 + 22939663 TGACCACTCTTCTGGCCTTCCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=-344.000000 s hg38.chr20_KI270870v1_alt 42981 3 + 183433 -GGA s panTro5.chr20 66366820 3 + 66533130 -GGA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 434840 3 - 578057 -GGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960548 3 - 110113093 -GGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689111 2 - 92844088 -GG- i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96351746 2 + 96509753 -GG- i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16826109 2 - 16982598 -GG- i macNem1.NW_012014244v1 I 1 C 0 s chlSab2.chr2 90250973 2 - 90373283 -GG- i chlSab2.chr2 I 1 C 0 s calJac3.chr5 58154323 2 + 159171411 -GG- i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16219488 2 + 16356641 -GG- i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1084780 2 + 1231380 -GG- i cebCap1.NW_016107870v1 I 1 C 0 s otoGar3.GL873542 22780949 3 + 22939663 GGG- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e cerAty1.NW_012001373v1 3629149 0 - 3785965 C e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=15600.000000 s hg38.chr20_KI270870v1_alt 42984 2 + 183433 CC s panTro5.chr20 66366823 2 + 66533130 CC i panTro5.chr20 C 0 I 1381 s gorGor5.CYUI01015848v1 434843 2 - 578057 CC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960551 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689113 2 - 92844088 CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351748 2 + 96509753 CC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826111 2 - 16982598 CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629149 2 - 3785965 CC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250975 2 - 90373283 CC i chlSab2.chr2 C 0 C 0 s calJac3.chr5 58154325 2 + 159171411 CC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219490 2 + 16356641 CC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084782 2 + 1231380 CC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22780952 2 + 22939663 CC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e colAng1.NW_012114444v1 5502247 0 - 5823884 C e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=40199.000000 s hg38.chr20_KI270870v1_alt 42986 10 + 183433 CTCTG-----CATTT- s gorGor5.CYUI01015848v1 434845 10 - 578057 CTCTG-----CATTT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960553 10 - 110113093 CTCTG-----CATTT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689115 10 - 92844088 CTCTG-----CATTT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351750 10 + 96509753 CTCTG-----CATTT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826113 10 - 16982598 CTCTG-----CATTT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629151 10 - 3785965 CTCTG-----CATTT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250977 10 - 90373283 CTCTG-----CATTT- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5502247 10 - 5823884 CTCTG-----CATTT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154327 15 + 159171411 CTCTGGGCTATGTTT- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219492 15 + 16356641 CTCTGGGCTGTGTTT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084784 15 + 1231380 CTCTGGGCTGTGTTT- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22780954 11 + 22939663 CTCTG-----TGACTG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I a score=982717.000000 s hg38.chr20_KI270870v1_alt 42996 162 + 183433 GCTCCTTGGGTTCCCGGAACTTGAGCTTGGGTCTTGGTCCACAGCAGCTTTGGGAAGGGCCCTCGGCTGCTTTTTGCTTCAGCAG---CTGGGGAGCA-GTTAACTTTCAGACCCGGCCCTCCCC--CAAGGCAGCTCAGGGAGGGGCTGGACACTC-GGttatttatg s gorGor5.CYUI01015848v1 434855 161 - 578057 GCTCCTTGGGTTCCCGGAACTTGAGCTTGGGTCTTGGTCCACAGCAGCTTTGGCAAGGGCCCTCGGCTGCTTTTTGCTTCCGCAG---CTGGGGAGCA-GTTAACCTTCAGACCCGACCCT-CCC--CAAGGCAGCTCAGGGAGGGGCTGGACACTC-AGttatttatg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960563 162 - 110113093 GCTCCTTGGGTTCCCGGAACTTGAGCTTGGGTCTCGGTTCACAGCCGCTTTGGGAAAGGCCCTCAGCTGCTTTTTGCTTCAGCAG---CTGGGGAGCA-GTTAACCTTCAGACCTGACCCTACCC--CAAGGCAGCTCAGGGAGGGGCTGGACACTC-GGttatttatg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689125 162 - 92844088 TCTCCTTGGGTTCCTGGAACTTGAGCTTGGGTCTTGGTCCACCGCCACTTTGGGAAGGGCCCTTGGCTGCTTTTTGCTTCAGCAG---CTGGGGAGCA-GTTAACCTTCAGACCCGACCCTATCC--CAAGGCAGCTCAGGGAGGGACTGGACACTT-GGttatttatg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351760 162 + 96509753 TCTCCTTGGGTTCCTGGAACTTGAGCTTGGGTCTTGGTCCACCGCCACTTTGGGAAGGGCCCTTGGCTGCTTTTTGCTTCAGCAG---CTGGGGAGCA-GTTAACCTTCAGACCCGACCCTATCC--CAAGGCAGCTCAGGGAGGGACTGGACACTT-GGttatttatg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826123 162 - 16982598 TCTCCTTGGGTTCCTGGAACTTGAGCTTGGGTCTTGGTCCACCGCCACTTTGGGAAGGGCCCTTGGCTGCTTTTTGCTTCAGCAG---CTGGGGAGCA-GTTAACCTTCAGACCCGACCCTATCC--CAAGGCAGCTCAGGGAGGGACTGGACACTT-GGttatttatg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629161 162 - 3785965 GCTCCTTGGGTTCCTGGAACTTGAGCTTGGGTCTTGGTCCACCGCCGCTTTGGGAAGGGCCCTTGGCTGCTTTTTGCTTCAGCAG---CTGGGGAGCA-GTTAACCTTCAGACCCGACCCTATCC--CAAGGCAGCTCAGGGAGGGACTGGACACTT-GGttatttatg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90250987 162 - 90373283 GCTCCTTGGGTTCCTGGAACCTGAGCTTGGGTCTTGGTCCACCGCCGCTTTGGGAAGGGCCCTTGGCTGCTTTTTGCTTCAGCAG---CTGGGGAGCA-GTTAACCTTCAGACCTGGCCCTAACC--CAAGGCTCCTCAGGGAGGGACTGGACACTT-GGttatttatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 0 162 - 179258 GCTCCTTGGGTTCCTGGAACTTGAGCTTGGGTCTTGGTCCACCGCCGCTTTGGGAAGGGCCCTTGGCTGCTTTTTGCTTCAGCAG---CTGGGGAGCA-GTTAACCTTCAGACCCGGCCCTATCC--CAAGGCAGCTCAGGGAGGGACTGGACACTT-GGttatttatg i manLeu1.NW_012101652v1 N 0 C 0 s colAng1.NW_012114444v1 5502257 162 - 5823884 GCTCCTTGGGTTCCTGGAACTTGAGCTTGGGTCTTGGTCCACCGCCGCTTTGGGAAGGGCCCTCGGCTGCTTTTTGCTTCAGCAG---CTGGGGAGCA-GTTAGCCTTCAGACCCGACCCTATCC--CAAGGCAGCTCAGGGAGGGACTGGACACTT-GGttatttatg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154342 137 + 159171411 GCATCTTGGGTTCCTGGGACTTGAGCTTGGGTCTTGGTCCACAGCTGCTTTGGAAAGGGCCCTCAGCTGC---TTGCTTCAG--------------------------CAGACCCGACCCGACCC--CCAGGCAGCTCAGGGAGGGACTGGATACTT-GGTTATTTATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219507 137 + 16356641 GCTTCTTGGGTTCCTGGGACTTGAGCTTGGGTCTCGGTCCACAGCCACTTTGGGACGGGCCCTTGGCTGT---GTGCTTCAG--------------------------CAGACCCGACCTGACCC--CCAGGCAGCTCAGGGAGGGGCTGGATACTT-GGTTATTTATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084799 132 + 1231380 GCTTCTTGGGTTCCTGGGACTTGAGCTTGGGTCTTGGTCCACAGCCACTTTGGGAAGGGCCCTCGGCTGC---TCGCTTCAG--------------------------CAGACCC-----GACCC--CCAGGCAGCTCAGGGAGGGGCTGGATACTT-GGTTATTTATG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22780965 165 + 22939663 GGATGTTGGGCTGTATTTGCTTGC-CCTGGGTCTTGGTTCACAGCTACTTTGGAAAGGACCCTTGGTCAT---TTGTGTCAGCTGCCTCTGCGGAGCATGTGAACCCTCAGATCTGACCCCCACTGGCAAGGCAAATCAAGAAGGGAGCTGGCACTTGGGTTATTTATT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e canFam3.chr24 47545537 10261 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I a score=71207.000000 s hg38.chr20_KI270870v1_alt 43158 16 + 183433 tatttac--------ttatttTTA s gorGor5.CYUI01015848v1 435016 16 - 578057 tatttac--------ttatttTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109960725 16 - 110113093 tatttac--------ttattttta i nomLeu3.chr13 C 0 M 711 s rheMac8.chr10 92689287 16 - 92844088 tatttac--------ttatttttt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351922 16 + 96509753 tatttac--------ttatttttt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826285 16 - 16982598 tatttac--------ttatttttt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629323 16 - 3785965 tatttac--------ttatttTTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251149 16 - 90373283 tatttac--------ttatttTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 162 16 - 179258 tatttac--------ttatttTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5502419 16 - 5823884 tatttac--------ttatttTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154479 24 + 159171411 TATTTGTATCTTTACTTATTTTTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219644 22 + 16356641 TGTTTATATC--TGCTTATTTTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084931 19 + 1231380 TATTTATGTC-----TTCTTTTTA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22781130 4 + 22939663 TATA-------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47555798 16 + 47698779 TGTTTCT--------TTATTTTCA i canFam3.chr24 I 10261 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I a score=266827.000000 s hg38.chr20_KI270870v1_alt 43174 40 + 183433 AATCAAAGCACAGCAAACA------TGAC-CATGTGGGGGTGG--CCCA----- s gorGor5.CYUI01015848v1 435032 40 - 578057 AATCAAAGCACAGCAAACA------TGAC-CATGTGGGGGTGG--CCCA----- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 151489 40 + 110113093 AATCAAAGCACAGCAAACA------TGAC-CATGTGGGGGTGG--CCCA----- i nomLeu3.chr13 n 0 C 0 s rheMac8.chr10 92689303 43 - 92844088 aATCAAAGCACAGCAAACACAC---TGAC-CATGTGGAGGTGG--CCCA----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351938 43 + 96509753 aATCAAAGCACAGCAAACACAC---TGAC-CATGTGGAGGTGG--CCCA----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826301 43 - 16982598 aATCAAAGCACAGCAAACACAC---TGAC-CATGTGGAGGTGG--CCCA----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629339 43 - 3785965 AATCAAAGCACAGCAAACACAC---TGAC-CATGTGGAGGTGG--CCCA----- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251165 43 - 90373283 AATCAAAGCACAACAAACACAC---TGAC-CATGTGGAGGTGG--CCCA----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 178 43 - 179258 AATCAAAGCACAGCAAACACAC---TGAC-CATGTGGAGGTGG--CCCA----- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5502435 45 - 5823884 CATCAAAGCGCAGCAGACACAC---TGAC-CACGTGGAGGTGGCCCCCA----- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154503 46 + 159171411 AATCAAAGCACAGCAAACACATGTGGGTC-CATGTGGGTATGG--CCCT----- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219666 43 + 16356641 AATCAAAGCGCAGCAAACACAC---TAAC-CGTGTGGTTATGG--CCCC----- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084950 43 + 1231380 AATCAAAGCACAGCAAACACAC---TGAC-CATGTGGGTATGG--CCCC----- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22781134 42 + 22939663 TATCAAAGCACAACAAACACAC---TG-C-TACACAGGTATGG--CCCA----- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47555814 48 + 47698779 -CCTGAAGCACGACAGACACAC---GGATGCATTCGGGTCCAG--CATGCCCTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1792646 12199 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56789686 8100 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I a score=365422.000000 s hg38.chr20_KI270870v1_alt 43214 37 + 183433 GTGGACCCTCACAGTGAGCCCTGGGCCACACAGAACA s gorGor5.CYUI01015848v1 435072 37 - 578057 GTGGACCCTCACAGTGAGCCCTGGGCCATGCAGAACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 151529 37 + 110113093 GTGGACCCTCACAGTGAGCCCTGGGCCACACAGAGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689346 37 - 92844088 GTAGACCCTCACAGCGAGCCCTGGGCCACACAGAACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96351981 37 + 96509753 GTAGACCCTCACAGCGAGCCCTGGGCCACACAGAACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826344 37 - 16982598 GTAGACCCTCACAGCGAGCCCTGGGCCACACAGAACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629382 37 - 3785965 GTGGACCCTCACGGCGAGCCTTGGGCCACACAGAACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251208 37 - 90373283 GTGGACCCTCACAGCGAGCCCTGGGGCACACAGAACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 221 37 - 179258 GTGGACCCTCACAGCGAGCCCTGGGCCACACAGAACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5502480 37 - 5823884 GTGGACCCTCACAGCGAGCCCTGGGCCACACAGAACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154549 36 + 159171411 GTGGACCCTCACAGTGAGCCCTGGG-CACGCAGAACT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219709 37 + 16356641 GTGGACCCTCACAGTGAGCCCTGGGCCATGCAGAACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1084993 37 + 1231380 GTGGACCCTCACAGCAAGCCCTGGGCCACGCAGAACT i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56797786 37 + 57149010 GTGGACTCTCACAGTGAGCTCTGGGCCACACAGAACA i micMur3.chr18 I 8100 I 2019 s proCoq1.NW_012150197v1 1804845 37 - 2029793 GTGGACTCTCACAGTGAGCTCTGCGCCACGCAGAACG i proCoq1.NW_012150197v1 I 12199 C 0 s otoGar3.GL873542 22781176 36 + 22939663 GGGGACTATCACAATAAGCTCTGGGCCAC-CAGAATG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47555862 34 + 47698779 GTGGGCCCTCCCAG--AGCCCCGGA-CACGCAGAACC i canFam3.chr24 C 0 C 0 e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I a score=62049.000000 s hg38.chr20_KI270870v1_alt 43251 9 + 183433 TGGCCCTGG s gorGor5.CYUI01015848v1 435109 9 - 578057 TGGCCCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 151566 9 + 110113093 TGGCCCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689383 9 - 92844088 TGGCCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352018 9 + 96509753 TGGCCCCGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826381 9 - 16982598 TGGCCCCGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629419 9 - 3785965 CGGCCCCGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251245 9 - 90373283 TGGCCCCGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 258 9 - 179258 TGGCCCCGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5502517 9 - 5823884 TGGCTCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154585 9 + 159171411 CGGCCATGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219746 9 + 16356641 CGGCCGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085030 9 + 1231380 CGGCCGTGG i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1804882 9 - 2029793 TGGCCCTGG i proCoq1.NW_012150197v1 C 0 I 1563 s otoGar3.GL873542 22781212 7 + 22939663 -TGCCCTG- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47555896 9 + 47698779 GCACCCCGG i canFam3.chr24 C 0 C 0 e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I a score=11220.000000 s hg38.chr20_KI270870v1_alt 43260 3 + 183433 AGC s gorGor5.CYUI01015848v1 435118 3 - 578057 AGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 151575 3 + 110113093 GGC i nomLeu3.chr13 C 0 n 0 s rheMac8.chr10 92689392 3 - 92844088 AGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352027 3 + 96509753 AGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826390 3 - 16982598 AGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629428 3 - 3785965 AGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251254 3 - 90373283 AGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 267 3 - 179258 AGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5502526 3 - 5823884 AGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154594 3 + 159171411 TGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219755 3 + 16356641 TGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085039 3 + 1231380 TGC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22781219 3 + 22939663 AAC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47555905 2 + 47698779 GG- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I a score=291911.000000 s hg38.chr20_KI270870v1_alt 43263 61 + 183433 ACC--CCTATGAGGTTTTAACAGGGTTTTGGGGGACCTTGGTGCTTCCTAAAGTTTCGGGATG s gorGor5.CYUI01015848v1 435121 61 - 578057 ACC--CCTGTGAGGTTTTAACAGGGTTTTGGGGGACCTTGGTGCTTCCTAAAGTTTCGGGATG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689395 61 - 92844088 ACC--TCTATGGGGTTTTAACAGGCTCTTGGGGGACCTTGGTGCTGCCTGAAGTTTCAGGATC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352030 61 + 96509753 ACC--TCTATGGGGTTTTAACAGGCTCTTGGGGGACCTTGGTGCTGCCTGAAGTTTCAGGATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826393 61 - 16982598 ACC--TCTGTGGGGTTTTAACAGGCTCTTGGGGGACCTTGGTGCTGCCTGAAGTTTCAGGATC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629431 61 - 3785965 ACC--TCTACGGGGTTTTAACAGGCTCTTGGGGGACCTTGGTGCTGCCTGAAGTTTCAGGATC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251257 61 - 90373283 ACC--TCTATGGGGTTTTAACAGGCTCTTGGGGGACCTTGGTGCTGCCTGAAGTTTCAGGATC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 270 61 - 179258 ACC--TCTATGGGGTTTTAACAGGCTCTTGGGGGACCTTGGTGCTGCCTGAAGTTTCAGGATC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5502529 61 - 5823884 ACC--CCTATGAGGTTTTAACTGGCTCTTGGGGGACCTTGGTGCTTCCTGAAGTTTCAGGAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154597 60 + 159171411 -AC--CCCATGAGGTTTTAACAGGGTCTTGGGGGACCCTGGTGCTCCCTGAAGTTCCAAGATC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219758 60 + 16356641 -AC--CCCATGAGGTTTTAACAGGGTCTTGGGGGACCCTGGTGCTTCCTGAAGTTTCAAGATC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085042 59 + 1231380 -AC--CCCATGAGGTTTTAAT-GGGTCTTGAGGGACCCTGGTGCTCCCTGAAGTTTCAAGATC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22781222 48 + 22939663 ACCTACCTGTGAGGTTTTAG--GGGTCT-------------GGCTTCCCACTGGTTTACGAAC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47555907 14 + 47698779 ----------------TTGGCAGGGTCCTG--------------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 190530 527 - 397369 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 151578 0 + 110113093 I a score=1161473.000000 s hg38.chr20_KI270870v1_alt 43324 224 + 183433 AGTCCCCGGGGTCTCCAGACTGCGTCTGCCTC-----------CTCGTGCACCAGAGGGTGGCAGTAACTGTTCATGTTTG----------CCCCATCCAGGGG-TTTTTACCAGGGGTACCTCATCCTTTCTGGGGAG-TGGGGAG---------AGCACCTGAGGGGGTCGG---CCTGGAACA----GGAGGTTGCAGCCC-ATTGCCtgagtcttaaagtgtgccct-tcccca----------cagcacttcaggatcactctgggacca s gorGor5.CYUI01015848v1 435182 224 - 578057 AGTCCCCGGGGTCTCCAGACTGCGTCTGCCTC-----------CTCGTGCACCAGAGGGTGGCAGTATCTGTTCATGTTTG----------CCCCATCCAGGGG-TTTTTACCAGGGGGACCTCATCCTTTCTGGGGAG-TGGGGAG---------AGCACCTGAGGGGGTCGG---CCTGGAACA----GGACGTTGCAGCCC-ATTGCCtgagtcttaaagtgtgccct-tcccca----------cagcacttcaggatcactctgggacca i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689456 233 - 92844088 AGCCCCTGAGGTCTCTAGACTGCGTCTGCCTC-----------CTTGTGCACCAGGCGGCGGCAGCATCTGTTCGTGTTTGCCCACCTGGACCCCATCCAGGGG-TTTTTCCCAGGGCGACCTCGTCCGTTGTGGGGAG-TGGGGAG---------AGCCCCTGA-GGGGTCGG---CCTGGAACG----GGAGGTGGCAGCCC-ATTGCCCGAGTCTCGAAGTGAGTCCT-TCCCCA----------CAGCACTTCAGGATTACTCTGGGGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352091 233 + 96509753 AGCCCCCGAGGTCTCTAGACTGCGTCTGCCTC-----------CTTGTGCACCAGGCGGCGGCAGCATCTGTTCGTGTTTGCCCACCTGGACCCCATCCAGGGG-TTTTTCCCAGGGCGACCTCGTCCGTTGTGGGGAG-TGGGGAG---------AGCCCCTGA-GGGGTCGG---CCTGGAACG----GGAGGTGGCAGCCC-ATTGCCCGAGTCTCGAAGTGAGTCCT-TCCCCA----------CAGCACTTCAGGATTACTCTGGGGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826454 232 - 16982598 AGCCCCCGAGGTCTCTAGACTGCGTCTGCCTC-----------CTTGTGCACCAGGAGGCGGCAGCATCTGTTCGTGTTTGCCCACCTGGACCCCATCCAGGGG--TTTTCCCAGGGCGACCTCGTCCGTTGTGGGGAG-TGGGGAG---------AGCCCCTGA-GGGGTCGG---CCTGGAACG----GGAGGTGGCAGCCC-ATTGCCCGAGTCTCGAAGTGAGTCCT-TCCCCA----------CAGCACTTCAGGATTACTCTGGGGCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629492 233 - 3785965 AGCCCCCGGGGTCTCTAGACCGCGGCTGCCTC-----------CTTGTGCACCAGGGGGCGGCAGCATCTGCTCGTGTTTGCCCACCTGGACCCCATCCAGGGG-TTTTTCCCAGGGCGACCTCATCCGTTTTGGGGAG-TGGGGAG---------AGCCCCTGA-GGGGTCGG---CCTGGAACG----GGAGGTGGCAGCCC-ATTGCCCGAGTCTCGAAGTGAGTCCT-TCCCCA----------CAGCACTGCAGGATTACTCTGGGGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251318 233 - 90373283 AGCCCCCGGGGTCTCTAGACTGCATCTGCCTC-----------CTTGTGCACCAGAGGACGGCAGCATCTGTTCACGTTTGCCCACCTGGACCCCATCCAGGGG-TTTTCCCCAGGGCGACCTCATCCGTTTTGGGGAG-TGGGGAG---------AGCCCCTGA-GGGGTCGG---CCTGGAACG----GGAGGTGGCAGCCC-ATTGCCCGAGTCTCGAAGTGTGTCCT-TCCCCA----------CAGCACTTCAGGATTACTCTGGGGCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 331 233 - 179258 AGCCCCTGGGGTCTCTAGACCGCGTCTGCCTC-----------CTTGTGCACCAGGGAGTGGCAGCATCTGCTCGTGTTTGCCCACCTGGACCCCATCCAGGGG-TTTTTCCCAGGGCGACCTCATCCGTTTTGGGGAG-TGGGGAG---------AGCCCCTGA-GGGGTCGG---CCTGGAACG----GGAGGTGGCAGCCC-ATTGCCCGAGTCTCGAAGTGAGTCCT-TCCCCA----------CAGCACTGCAGGATTACTCTGGGGCCA i manLeu1.NW_012101652v1 C 0 I 8439 s colAng1.NW_012114444v1 5502590 234 - 5823884 AGCCCCCAGGGTCTCCAGACTGCGTGTGCCTC-----------CTTGTGCACCAGAGGGTGGCAGCATCTGTTCATGTTTGCCCACCTGGACCCCATCCAGGGG-TTTTTACCAGGGGGACCTCATCCGTTTTGGGGAG-TGGGGAG---------AGCCCCTGAGGGGGTCGG---CCTGGAACG----GGAGGTGGCAGCCC-ATTGCCCGAGTCTCGAAGTGCGTCCT-TCCCCA----------CAGCACTTCAGGATTACTCTGGGGCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154657 242 + 159171411 AGTGCCCGGGGTCTCCAGACTGCATCTCCCTCCTCCCACCCATCTCATGTGCCAGAGGGTGGCAGCTTCTGCTCATGTTTGCCCACCTGGACCCCATTCAGAGG-TTTTTACCAGAGGGACCCCACCTTTTCTGAGGAG-TAGGGAG---------AACACCTAAAGGGGTTGG---CCTGGAATG----GCAGGTTATAGCCC-A----CTGAATCTTAAAGGGCCCCCCGACCCCA----------CAGCACTTCAGGGTTACTCTGGAGCCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16219818 240 + 16356641 AGCCCCCGGGGTCTTCAGACTGCATCTTCCTCCTCCCACCCGCCTCGTGTGCCAGAGGGTGGCAGCTTCTGCTCATGTTTGCCCAACTGGACCCCATTCAGATG-TTTTTGCCAG-GGGACCCCACCTTTTCTGGGGAG-TAGGGAG---------AGCACCTGAAGGGGTTGG---CCTGGAATG----GGAAGTTATAGCCC-A----CTGAGTCTTAAAGGGTCCCCC-ACCCCA----------CAGTACTTCAGGGTCACTCTGGAGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085101 240 + 1231380 AGCCCCTGGGGTCTCCAGACTGCATCTTCCTCCTCCCACCCGCCTCGTGTGCCAGAGGGTGGCAGCTTCTGCTCATGTTTGCCCACCTGGACCCCATTCAGAGG-TTTTTACCGG-GGGATCCCACCTTTTCTGGGGAG-TAGGGAG---------AGCACCTGAAGGGGTTGG---CCTGGAATG----GGAGGCTATAGCCC-A----CTGAGTCTTAAAGGGCCCCCC-ACTCCA----------CAGCACTTCAGGGTCACTCTGGAGCCA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22781270 218 + 22939663 TGCCACCTGAGT-----------GTCTCATCC-----------CGCATCCGCCAGACGGTGGTGGTGTCTGCTCATGTTTATCCACTAGGACACCTTCCTGGAGATTCTTACCAGTAG------ACCTGTCCTAAGGAGCTGGGAGG---------GGGAGACAAAGGTGCCCG---GCTGTAATG----GGAAGTCACAACCTGAGAATCCTGGTCTTAGAAAGCAGCCC-TGCCC-----------CAACA-TTCAGGGTCACTCTGGGGCCA i otoGar3.GL873542 C 0 I 8 s canFam3.chr24 47555921 220 + 47698779 -GCCCCT--------CAGCCTGTGTCTGTCAC-----------CT-----GCCAG---GTAGCAGAGCCTTCTTACGTTTGCCCACCTGGAGCT--GCCAGGAG---CTCCCGGGGAGGGACCCATCTG---TGGGGCG-CTGGGAGCTCCTGTCAGGCCCTCGGGGAGGCTGGCATCCTGGGGGGCCCCTGCAGCGCCAGCCC-T---CCCGACAC---GGGGGTGCCTG-CCCCTACGCCCCAGCTCAGAGCCTCAGGATCAG---------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 191057 203 - 397369 AGGCCCCCAGGGCCCCAGACCGCGCCC-CTCC-----------CTCGGCTGCCAGCGGGTGGCAGCACCTCCTCGCGTTCGCTCCCTGGGTCCTCC-----GGG-CTCTAC---GGGGGACCC--------------GG-TAGCTCG---------AGCACTTGGGGCAGATTC---TCTGGGGGC----AGAGACTGGAATCG-G--------GTTTTGACTGTGGCCCT-GCCCCT----------CCACGAGTTAGGGTCATTTTGGCGCCA i dasNov3.JH569290 I 527 I 4 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e panPan2.chr20 62046415 697 + 62195757 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 151578 0 + 110113093 I a score=88593.000000 s hg38.chr20_KI270870v1_alt 43548 20 + 183433 tcctaggat----taggaattttA s gorGor5.CYUI01015848v1 435406 20 - 578057 tcctaggat----taggaattttA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689689 20 - 92844088 ACCTAGGGT----TAGGAATTTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352324 20 + 96509753 ACCTAGGGT----TAGGAATTTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826686 20 - 16982598 ACCTAGGGT----TAGGAATTTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629725 20 - 3785965 ACCTAGGGT----TAGGAATTTAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251551 20 - 90373283 ACCTAGGGT----TAGGAATTTAA i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5502824 20 - 5823884 ACCTAGGGT----TAGGAATTTAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154899 20 + 159171411 TCTTAGGAT----TAGGAATTTAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220058 20 + 16356641 TCTTAGGAT----TAGGAATTTAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085341 20 + 1231380 TCTTAGGAT----TAGGAATTTAA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22781496 20 + 22939663 CTACAGGTT----TAGGAATTTTA i otoGar3.GL873542 I 8 I 2368 s canFam3.chr24 47556141 20 + 47698779 TTACAGGAT----GGGGAATCAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 191264 23 - 397369 CCCTGGTGTGGAATGGGTGGTTA- i dasNov3.JH569290 I 4 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e panPan2.chr20 62046415 697 + 62195757 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 151578 0 + 110113093 I a score=26377.000000 s hg38.chr20_KI270870v1_alt 43568 9 + 183433 ----AAACGTTTA s gorGor5.CYUI01015848v1 435426 9 - 578057 ----AAATGTTTA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689709 9 - 92844088 ----AAATGTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352344 9 + 96509753 ----AAATGTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826706 9 - 16982598 ----AAATGTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629745 9 - 3785965 ----AAATGTTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251571 9 - 90373283 ----AAATGTTTA i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5502844 9 - 5823884 ----AAATGTTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58154919 9 + 159171411 ----aaatattta i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220078 9 + 16356641 ----AAATATTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085361 9 + 1231380 ----AAATACTTA i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47556161 7 + 47698779 ----AGACATA-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 191287 12 - 397369 AGGTACATTTTT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e panPan2.chr20 62046415 697 + 62195757 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 151578 0 + 110113093 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=16724.000000 s hg38.chr20_KI270870v1_alt 43577 6 + 183433 AAAAAA- s panPan2.chr20 62047112 6 + 62195757 AAAAAA- i panPan2.chr20 I 697 C 0 s gorGor5.CYUI01015848v1 435435 6 - 578057 AAAACA- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689718 5 - 92844088 -AAAAA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352353 5 + 96509753 -AAAAA- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826715 5 - 16982598 -AAAAA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629754 5 - 3785965 -AAAAA- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251580 5 - 90373283 -AAAGA- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5502853 5 - 5823884 -AAAAA- i colAng1.NW_012114444v1 C 0 I 1145 s calJac3.chr5 58154928 5 + 159171411 -aaaaa- i calJac3.chr5 C 0 I 2 s saiBol1.JH378156 16220087 5 + 16356641 -AAACA- i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1085370 5 + 1231380 -AAAAA- i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47556168 4 + 47698779 --AACA- i canFam3.chr24 C 0 I 15 s dasNov3.JH569290 191299 6 - 397369 -GAATGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 151578 0 + 110113093 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=164718.000000 s hg38.chr20_KI270870v1_alt 43583 38 + 183433 ATTATTTTCCTTTTTTT-------GGGGGA--AATTGGTTATACATC s panPan2.chr20 62047118 37 + 62195757 ATTATTTTCC-TTTTTT-------GGGGGA--AATTGGTTATACATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435441 38 - 578057 ATTATTTTCCTTTTTTT-------GGGGGA--AATTGGTTATACATC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689723 38 - 92844088 ATTGTTTTCCTTTTTTG-------GGGGAA--AATTGGTTATACATC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352358 38 + 96509753 ATTGTTTTCCTTTTTTG-------GGGGGA--AATTGGTTACACATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826720 38 - 16982598 ATTGTTTTCCTTTTTTG-------GGGGGA--AATTGGTTATACATC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629759 38 - 3785965 ATTGTTTTCCTTTTTTG-------GGGGGA--AATTGGTTATACATC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251585 38 - 90373283 ATTGTTTTCCTTTTTTT-------GGGGGA--AATTGGTTATACATC i chlSab2.chr2 C 0 C 0 s calJac3.chr5 58154935 45 + 159171411 tttattttCCCTTTTTTTGGGGGGGAGGGG--AATTGGTGATACATC i calJac3.chr5 I 2 C 0 s saiBol1.JH378156 16220093 42 + 16356641 TTTATTTTCCTTTTTTT---GGGGGAGGGG--AATTGGTTATATATC i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1085375 41 + 1231380 ATTATTTTCCTTTTTTT----TGGGAGGGG--AATTGGTTATACATC i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47556187 40 + 47698779 TTTTTTTTTCCTTTTTG-------GAGGGGCCGACAGGTCGTACATG i canFam3.chr24 I 15 C 0 s dasNov3.JH569290 191305 33 - 397369 TTTATCTTTCCTTCTTT-----------GA--AAAAGGTAATGCAC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 151578 0 + 110113093 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=98830.000000 s hg38.chr20_KI270870v1_alt 43621 14 + 183433 CAGATGATTCAAAA s panPan2.chr20 62047155 14 + 62195757 CAGATGATTCAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435479 14 - 578057 CAGATGATTCAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109961472 13 - 110113093 CAGATGA-TCAAAA i nomLeu3.chr13 M 711 C 0 s rheMac8.chr10 92689761 14 - 92844088 CAGATGATTCAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352396 14 + 96509753 CAGATGATTCAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826758 14 - 16982598 CAGATGATTCAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629797 14 - 3785965 CAGATGATTCAAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251623 14 - 90373283 CAGATGATTCAAAA i chlSab2.chr2 C 0 C 0 s calJac3.chr5 58154980 14 + 159171411 CAGGTGATTCAAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220135 14 + 16356641 CAAATGATTCAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085416 14 + 1231380 CAGATGATTCAAAA i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47556227 14 + 47698779 TAGATGACTCAAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 191338 14 - 397369 GTGATGATTCAGAA i dasNov3.JH569290 C 0 I 505 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=48539.000000 s hg38.chr20_KI270870v1_alt 43635 8 + 183433 AGTAAAAG s panPan2.chr20 62047169 8 + 62195757 AGCAAAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435493 8 - 578057 AGCAAAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109961485 8 - 110113093 AGCAAAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689775 8 - 92844088 AGCAAAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352410 8 + 96509753 AGCAAAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826772 8 - 16982598 AGCAAAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629811 8 - 3785965 AGCAAAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251637 8 - 90373283 AGCAAAAG i chlSab2.chr2 C 0 C 0 s calJac3.chr5 58154994 8 + 159171411 AGCAAAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220149 8 + 16356641 AGCAAAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085430 8 + 1231380 AGCAAAGG i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47556241 8 + 47698779 AGAAAAAG i canFam3.chr24 C 0 I 568 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=97912.000000 s hg38.chr20_KI270870v1_alt 43643 18 + 183433 TTTAAAAATAAATAATAG s panPan2.chr20 62047177 18 + 62195757 TTTAAAAATAAATAATAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435501 18 - 578057 TTTAAAAATAAATAATAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109961493 18 - 110113093 TTTAAAAATAAATAATAG i nomLeu3.chr13 C 0 I 393 s rheMac8.chr10 92689783 18 - 92844088 TTTAAAAATAAATAATAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352418 18 + 96509753 TTTAAAAATAAATAATAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826780 18 - 16982598 TTTAAAAATAAATAATAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629819 18 - 3785965 TTTAAAAATAAATAATAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251645 18 - 90373283 TTTAAAAATAAATAATAG i chlSab2.chr2 C 0 C 0 s calJac3.chr5 58155002 18 + 159171411 TTTAATAATAAATGATGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220157 18 + 16356641 TTTAACAATAAATACTAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085438 18 + 1231380 TTTAACAATAAATAATAG i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=145379.000000 s hg38.chr20_KI270870v1_alt 43661 36 + 183433 TTTAAAAAATGCGCAAAACAAAAAAACTGCATACAG s panPan2.chr20 62047195 35 + 62195757 TTTAAAAAATGCGC-AAACCAAAAACCTGCATACAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435519 36 - 578057 TTTAAAAAATGCGCAAAACAAAAAAACTGCATACAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689801 36 - 92844088 TTTAAAAAATGCGCAAAACAAAAAAACTGCGTAAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352436 36 + 96509753 TTTAAAAAATGCGCAAAACAAAAAAACTGCGTAAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826798 36 - 16982598 TTTAAAAAATGCGCAAAACAAAAAAACTGTGTAAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629837 36 - 3785965 TTTAAAAAATGCGCAAAACAAAAAAACTGCGTAAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251663 36 - 90373283 TTTAAAAAATGCGCAAAACCAAAAAACTGCGTAAAG i chlSab2.chr2 C 0 C 0 s calJac3.chr5 58155020 36 + 159171411 TTTAAAAAATGCACAAAATGAAAAAACTGCATACAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220175 36 + 16356641 TTTTCAAAATGCACAAAATGAAAAAACTGCATACAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085456 36 + 1231380 TTTTAAAAATACACAAAATGAAAAACCTGCATACAG i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 109961511 393 - 110113093 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=42552.000000 s hg38.chr20_KI270870v1_alt 43697 11 + 183433 TGAAAAGGAAG s panPan2.chr20 62047230 11 + 62195757 TGAAAAGGAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435555 11 - 578057 TGAAAAGGAAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689837 10 - 92844088 -TGAAAGGAAG i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826834 11 - 16982598 TGAAAAGGAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629873 11 - 3785965 TGAAAAGGAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251699 11 - 90373283 TGAAAAGGAAG i chlSab2.chr2 C 0 C 0 s calJac3.chr5 58155056 11 + 159171411 TGAAAAGGAAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220211 11 + 16356641 TGAAAAGGAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085492 11 + 1231380 TGAAAAGGAAG i cebCap1.NW_016107870v1 C 0 I 53 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 109961511 393 - 110113093 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352472 0 + 96509753 C a score=19676.000000 s hg38.chr20_KI270870v1_alt 43708 7 + 183433 CATTTCT s panPan2.chr20 62047241 7 + 62195757 CATTTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435566 7 - 578057 CATTTCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92689847 7 - 92844088 CGTTTCT i rheMac8.chr10 C 0 I 34 s macNem1.NW_012014244v1 16826845 7 - 16982598 CGTTTCT i macNem1.NW_012014244v1 C 0 I 34 s cerAty1.NW_012001373v1 3629884 7 - 3785965 CGTTTCT i cerAty1.NW_012001373v1 C 0 I 36 s chlSab2.chr2 90251710 7 - 90373283 CGTTTCT i chlSab2.chr2 C 0 I 4 s calJac3.chr5 58155067 7 + 159171411 TGTTTCT i calJac3.chr5 C 0 I 43 s saiBol1.JH378156 16220222 7 + 16356641 TGTTTCT i saiBol1.JH378156 C 0 I 38 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 109961511 393 - 110113093 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352472 0 + 96509753 C a score=52853.000000 s hg38.chr20_KI270870v1_alt 43715 202 + 183433 TTTTTTAAAAAAttttattattattatactttaagttctagggtacatgtgcacaacatgcaggtttgttacatatgtatacatgtgccgtgttggtgtgctgcacccattaactcatcatttagcattaggtgtatctcctaatgctatccctcccctctccccgcaccccacaaaagtccccggtgtgtgatgttcccct s panPan2.chr20 62047248 202 + 62195757 TTTTTTAAAAAAttttattattattatactttaagttctagggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccgtgttggtgtgctgcacccattaactcatcatttagcattaggtgtatctcctaatgctatccctcccctctccccgcaccccacaaaagtccccggtgtgtgatgttcccct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435573 199 - 578057 TTTTTT--TAAAttttattattattatactttaagttttagggtacatgtgcacaacatgcaggtttgttacatatgtatacatgtgccgtgttggtgtgctgcacccattaactcgtcatttagcattaggtgcatctcctaataccatccctcccctct-cccgcaccccacaaaagtccccagtgtgtgatgttcccct i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251717 4 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 109961511 393 - 110113093 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352472 0 + 96509753 C a score=1146.000000 s hg38.chr20_KI270870v1_alt 43917 2 + 183433 tG s panPan2.chr20 62047450 2 + 62195757 tG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435772 2 - 578057 tG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96352472 2 + 96509753 TG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251717 4 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e nomLeu3.chr13 109961511 393 - 110113093 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=20547.000000 s hg38.chr20_KI270870v1_alt 43919 23 + 183433 AAAAGGAAGCGTTTCTGCTTCTC s panPan2.chr20 62047452 23 + 62195757 AAAAGGAAGCGTTTCTGCTTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435774 23 - 578057 AAAAGGAAGCATTTCTGCTTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109961904 23 - 110113093 aaaGGGAAGCATTTCTGCTTCTC i nomLeu3.chr13 I 393 C 0 s macFas5.chr10 96352474 23 + 96509753 AAAAGGAAGCGTTTCTGCTTCTC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251717 4 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=30065.000000 s hg38.chr20_KI270870v1_alt 43942 26 + 183433 CTCTTTCCGGTCCTTGACAGTGATTC s panPan2.chr20 62047475 26 + 62195757 CTCTTTCCCGTCCTTGACAGTGATTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435797 26 - 578057 CTCTTTCCGGTCCTTGACAGTGATTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109961927 26 - 110113093 CTCTTTCGGGTTCTTGACAGTGATTT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352497 23 + 96509753 ---TTTCAGGTCCTTGACGGTGATTC i macFas5.chr10 C 0 I 16 s chlSab2.chr2 90251721 26 - 90373283 CTCTTTCAGGTCCTTGACAGTGATTC i chlSab2.chr2 I 4 I 6 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=-690.000000 s hg38.chr20_KI270870v1_alt 43968 1 + 183433 C- s panPan2.chr20 62047501 1 + 62195757 C- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435823 1 - 578057 C- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109961953 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66366825 1381 + 66533130 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352520 16 + 96509753 I a score=19464.000000 s hg38.chr20_KI270870v1_alt 43969 46 + 183433 GTGCATCACAAACACACACGCTCCCTCAGTTACACGAATCACAAAC s panTro5.chr20 66368206 46 + 66533130 GTGCATCACAAACACACACGCTCCCTCAGTTACACGAATCACAAAC i panTro5.chr20 I 1381 C 0 s panPan2.chr20 62047502 46 + 62195757 GTGCATCACAAACACACACACTCCCTCAGTTACACGAATCACAAAC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109961955 33 - 110113093 GTGCATCACAAACACACACGCTTCCTCAGTTAC------------- i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e gorGor5.CYUI01015848v1 435824 0 - 578057 C e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352520 16 + 96509753 I a score=27201.000000 s hg38.chr20_KI270870v1_alt 44015 60 + 183433 ACAC---------------------------------------------------------------------------------------------------GCTCCCTCAGTTTTGTGCATCACAAACGCACACGCTCCCTCAGTTTTGTGCGTCAC s panTro5.chr20 66368252 159 + 66533130 ACACGCTCCCTCAGTTATGGACATCACAAACACACACGCTCCCTCAGTTTTGTGCGTCACAAACGCACACGCTCCCTCAGTTATGGACATCACAAACACACACGCTCCCTCAGTTTTGTGCATCACAAACGCACACGCTCCCTCAGTTTTGTGCGTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047548 60 + 62195757 ACAT---------------------------------------------------------------------------------------------------GCTCCCTCAGTTTTGTGCGTCACAAACACACACGCTCCCTCAGTTTCGTGCATCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435824 42 - 578057 ---------------------------------------------------------------------------------------------------------------------GGGCATCACAAATACACACGCTCCCTCAGTTTTGTGCTTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109961988 36 - 110113093 ---------------------------------------------------------------------------------------------------------------------GTGCGTCACAA----ACACGCTTCCT--GTTTTGTGCGTCAC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352536 60 + 96509753 ---------------------------------------------------------------------------------------------------ACACACTCCCTCAGTTATGGGCGTCACAAACACACACGCTCCCTCAGTTATGGGCGTCAC i macFas5.chr10 I 16 T 79 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=910.000000 s hg38.chr20_KI270870v1_alt 44075 1 + 183433 A s panTro5.chr20 66368411 1 + 66533130 A i panTro5.chr20 C 0 T 29 s panPan2.chr20 62047608 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435866 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962024 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352596 79 + 96509753 T a score=4827.000000 s hg38.chr20_KI270870v1_alt 44076 15 + 183433 CACACGC-----------------------------------TCCCTCAG s panTro5.chr20 66368383 50 + 66533130 CACACGCTCCCTCAGTTTTGTGCGTCACACACACACACACATTCCCTCAG i panTro5.chr20 T 29 C 0 s panPan2.chr20 62047609 15 + 62195757 AACACAA-----------------------------------TTCCTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435867 15 - 578057 AACACGA-----------------------------------TTCCTCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962025 15 - 110113093 AACACGC-----------------------------------TCCCTCAG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352596 79 + 96509753 T a score=6645.000000 s hg38.chr20_KI270870v1_alt 44091 6 + 183433 TTTTGT s panTro5.chr20 66368433 6 + 66533130 TTTTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047624 6 + 62195757 TTTTGT i panPan2.chr20 C 0 T 16 s gorGor5.CYUI01015848v1 435882 6 - 578057 TTTTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962040 6 - 110113093 TTTTGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352517 6 + 96509753 TTCTGA i macFas5.chr10 T 79 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=11892.000000 s hg38.chr20_KI270870v1_alt 44097 17 + 183433 GCGCCACAAACACGCGC s panTro5.chr20 66368439 17 + 66533130 GCGCCACAAACACGCGC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435888 17 - 578057 GCATCACAAACACACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962046 17 - 110113093 GCGTCACAAACACACAT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352523 17 + 96509753 CCATCACAAACACACAC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e panPan2.chr20 62047630 16 + 62195757 T e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=4809.000000 s hg38.chr20_KI270870v1_alt 44114 6 + 183433 ACTCCC s panTro5.chr20 66368456 6 + 66533130 GCTCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047614 6 + 62195757 AATTCC i panPan2.chr20 T 16 C 0 s gorGor5.CYUI01015848v1 435905 6 - 578057 GCTCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962063 6 - 110113093 GCTCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352540 6 + 96509753 ACTCCC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 564 8439 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=17241.000000 s hg38.chr20_KI270870v1_alt 44120 11 + 183433 TCAGTTATGTG s panTro5.chr20 66368462 11 + 66533130 TCAGTTATGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047620 11 + 62195757 TCAGTTTTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435911 11 - 578057 TCAGTTATGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962069 11 - 110113093 TCAGTTACGTG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352546 11 + 96509753 TCAGTTATGGG i macFas5.chr10 C 0 T 40 s manLeu1.NW_012101652v1 9003 11 - 179258 TCAGTTACGGG i manLeu1.NW_012101652v1 I 8439 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=17311.000000 s hg38.chr20_KI270870v1_alt 44131 16 + 183433 CGTCACAAACACAGAC s panTro5.chr20 66368473 16 + 66533130 CGTCACAAACACAGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047631 16 + 62195757 CATCACAAACACACAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435922 16 - 578057 CGTCACAAACACGCGC i gorGor5.CYUI01015848v1 C 0 I 60 s nomLeu3.chr13 109962080 16 - 110113093 CGTCACAAACACGCGC i nomLeu3.chr13 C 0 C 0 s manLeu1.NW_012101652v1 9014 16 - 179258 CGTCACAGACGCACAC i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352557 40 + 96509753 T a score=13470.000000 s hg38.chr20_KI270870v1_alt 44147 10 + 183433 GCTCCCTCAG s panTro5.chr20 66368489 10 + 66533130 GCTCCCTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047647 10 + 62195757 GCTCCCTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435998 10 - 578057 GCTCCCTCAG i gorGor5.CYUI01015848v1 I 60 C 0 s nomLeu3.chr13 109962096 10 - 110113093 GCTCCCTCAG i nomLeu3.chr13 C 0 C 0 s manLeu1.NW_012101652v1 9030 10 - 179258 GCTCCGTCAG i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352557 40 + 96509753 T a score=-5643.000000 s hg38.chr20_KI270870v1_alt 44157 6 + 183433 ---TTTTGC s panTro5.chr20 66368499 6 + 66533130 ---TTTTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047657 6 + 62195757 ---TTACAC i panPan2.chr20 C 0 T 33 s gorGor5.CYUI01015848v1 436008 5 - 578057 ---TTTGT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962106 6 - 110113093 ---TTATGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352517 6 + 96509753 TTCTGA--- i macFas5.chr10 T 40 C 0 s manLeu1.NW_012101652v1 9040 3 - 179258 ---TTA--- i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=-3500.000000 s hg38.chr20_KI270870v1_alt 44163 1 + 183433 -G s panTro5.chr20 66368505 1 + 66533130 -G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047630 1 + 62195757 -G i panPan2.chr20 T 33 C 0 s gorGor5.CYUI01015848v1 436013 1 - 578057 -G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962112 1 - 110113093 -G i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352523 1 + 96509753 C- i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 9043 1 - 179258 C- i manLeu1.NW_012101652v1 C 0 I 3 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16826852 34 - 16982598 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=64070.000000 s hg38.chr20_KI270870v1_alt 44164 29 + 183433 CATCACAAACACACACGCTCCCTCAGTTA s panTro5.chr20 66368506 29 + 66533130 CTTCACAAACACACACGCTCCCTCAGTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047631 29 + 62195757 CATCACAAACACACACGCTCCCTCAGTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436014 29 - 578057 CGTCACAAACACGCACGCTCCCTCAGTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962113 29 - 110113093 CGTCACAAATACGCGCGCTCCCTCACTTA i nomLeu3.chr13 C 0 I 33 s macFas5.chr10 96352524 29 + 96509753 CATCACAAACACACACACTCCCTCAGTTA i macFas5.chr10 C 0 T 33 s macNem1.NW_012014244v1 16826886 29 - 16982598 CATCACAAACACACACACTCCCTCAGTTA i macNem1.NW_012014244v1 I 34 C 0 s manLeu1.NW_012101652v1 9047 29 - 179258 CGTCACAGACGCACACGCTCCCCCAGTTA i manLeu1.NW_012101652v1 I 3 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=1929.000000 s hg38.chr20_KI270870v1_alt 44193 4 + 183433 TGGA s panTro5.chr20 66368535 4 + 66533130 TGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047660 4 + 62195757 CACG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436043 4 - 578057 TGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962175 4 - 110113093 TGTG i nomLeu3.chr13 I 33 C 0 s macFas5.chr10 96352520 4 + 96509753 TGAC i macFas5.chr10 T 33 C 0 s macNem1.NW_012014244v1 16826915 4 - 16982598 TGGG i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101652v1 9076 4 - 179258 CGGG i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92689854 34 - 92844088 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=54350.000000 s hg38.chr20_KI270870v1_alt 44197 28 + 183433 CATCACAAACACACACGCTCCCTCAGTT s panTro5.chr20 66368539 28 + 66533130 CGTCACAAACACACACGCTCCCTCAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047664 8 + 62195757 AATCACAA-------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436047 28 - 578057 TGTCACACACACAGACGCTCCCTCAGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962179 26 - 110113093 CGTCACAA--ACGCGCGCTCCCTCAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689888 28 - 92844088 CATCACAAACACACACACTCCCTCAGTT i rheMac8.chr10 I 34 C 0 s macFas5.chr10 96352524 28 + 96509753 CATCACAAACACACACACTCCCTCAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826919 28 - 16982598 CGTCACAAACACACACGCTCCCTCAGTT i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101652v1 9080 28 - 179258 CGTCACAGACGCACACGCTCCCCCAGTT i manLeu1.NW_012101652v1 C 0 I 43 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=63822.000000 s hg38.chr20_KI270870v1_alt 44225 33 + 183433 TTGTGCTTCACAAACACACACGCTCCCTCAGTT s panTro5.chr20 66368567 33 + 66533130 ATGTGCGTCACAAACACACACGCTCCCTCAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047672 18 + 62195757 ---------------ACACACGCTCCCTCAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436075 32 - 578057 -TGTGCGTCACGAACACGCGCGCTCCCTCAGTT i gorGor5.CYUI01015848v1 C 0 T 65 s nomLeu3.chr13 109962205 33 - 110113093 TTGTGCGTCACAAACACACGCGTTCCCTCAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689916 33 - 92844088 ATGGGCGTCACAAACACACACGCTCCCTCAGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352552 33 + 96509753 ATGGGCGTCACAAACACACACGCTCCCTCAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826947 33 - 16982598 ATGGGCGTCACAAACACACACGCTCCTTCAGTT i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=-543.000000 s hg38.chr20_KI270870v1_alt 44258 5 + 183433 ATGGA s panTro5.chr20 66368600 5 + 66533130 TTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047690 5 + 62195757 ATGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436042 5 - 578057 TTGTG i gorGor5.CYUI01015848v1 T 65 C 0 s nomLeu3.chr13 109962238 5 - 110113093 ATGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689949 5 - 92844088 ATGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352585 5 + 96509753 ATGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826980 2 - 16982598 GG--- i macNem1.NW_012014244v1 C 0 T 96 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=130339.000000 s hg38.chr20_KI270870v1_alt 44263 61 + 183433 CATCACAAACACACACGCTCCCTCAGTTTTGTGCTTCACAAACACACACGCTCCCTCAGTT s panTro5.chr20 66368605 61 + 66533130 CGTCACAAACACACACGCTCCCTCAGTTTTGTGCTTCACAAACACACACGCTCCCTCAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047695 61 + 62195757 CATCACAAACACACACGCTCCCTCAGTTTTGTGCATCACAAACACACACGCTCCCTCAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436047 60 - 578057 TGTCACACACACAGACGCTCCCTCAG-TTTGTGCGTCACGAACACGCGCGCTCCCTCAGTT i gorGor5.CYUI01015848v1 C 0 T 278 s nomLeu3.chr13 109962243 61 - 110113093 CGTCACAAATACGCGCGCTCCCTCACTTATATGTGTCACAAACACAGAGGCTCCCTCAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689954 61 - 92844088 CGTCACAAACACGCACGCTCCCTCAGTTATGGGCGTCACAAACACGCACGCTCCCTCAGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352590 61 + 96509753 CGTCACAAACACACACGCTCCCTCAGTTATGGGCGTCACAAACACACACGCTCCCTCAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826886 61 - 16982598 CATCACAAACACACACACTCCCTCAGTTATGGGCGTCACAAACACACACGCTCCCTCAGTT i macNem1.NW_012014244v1 T 96 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=55642.000000 s hg38.chr20_KI270870v1_alt 44324 33 + 183433 ATGGACATCACAAACACACACGCTCCCTCAGTT s panTro5.chr20 66368666 33 + 66533130 ATGGACATCACAAACACACACGCTCCCTCAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047756 33 + 62195757 ACGGACATCACAAACACACACGCTCCCTCAGTT i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109962304 33 - 110113093 TTGTGCGTCACAAACACACACCCTCCCTCAGTT i nomLeu3.chr13 C 0 T 229 s rheMac8.chr10 92690015 33 - 92844088 ATGGGCGTCACAAACACGCACACTCCTTCAGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352651 33 + 96509753 ATGGGCGTCACAAACACACACGCTCCTTCAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826947 33 - 16982598 ATGGGCGTCACAAACACACACGCTCCTTCAGTT i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e gorGor5.CYUI01015848v1 436107 278 - 578057 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=52753.000000 s hg38.chr20_KI270870v1_alt 44357 37 + 183433 TTGTGCTTCACAAACACACACGCTCCCTCAGTTATGG s panTro5.chr20 66368699 37 + 66533130 TTGTGCATCACAAACACACACGCTCTCTCAGTTATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047789 37 + 62195757 ACGGACATCACAAACACACACGCTCCCTCAGTTACGG i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109962108 37 - 110113093 ATGTGCGTCACAAATACGCGCGCTCCCTCACTTATAT i nomLeu3.chr13 T 229 C 0 s rheMac8.chr10 92690048 34 - 92844088 ---GGCGTCACAAACACACACGCTCCCTCAGTTATCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352684 34 + 96509753 ---GGCGTCACAAACACACACGCTCCCTCAGTTATCG i macFas5.chr10 C 0 T 63 s macNem1.NW_012014244v1 16826980 34 - 16982598 ---GGCGTCACAAACACACACGCTCCCTCAGTTATCG i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e gorGor5.CYUI01015848v1 436107 278 - 578057 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=501.000000 s hg38.chr20_KI270870v1_alt 44394 1 + 183433 A s panTro5.chr20 66368736 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047826 1 + 62195757 A i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109962145 1 - 110113093 G i nomLeu3.chr13 C 0 T 188 s rheMac8.chr10 92690082 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352655 1 + 96509753 G i macFas5.chr10 T 63 C 0 s macNem1.NW_012014244v1 16827014 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e gorGor5.CYUI01015848v1 436107 278 - 578057 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=22440.000000 s hg38.chr20_KI270870v1_alt 44395 12 + 183433 CATCACAAACAC s panTro5.chr20 66368737 12 + 66533130 CATCACAAACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62047827 12 + 62195757 CATCACAAACAC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109961958 12 - 110113093 CATCACAAACAC i nomLeu3.chr13 T 188 C 0 s rheMac8.chr10 92690083 12 - 92844088 CGTCACAAACAC i rheMac8.chr10 C 0 T 63 s macFas5.chr10 96352656 12 + 96509753 CGTCACAAACAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16827015 12 - 16982598 CGTCACAAACAC i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e gorGor5.CYUI01015848v1 436107 278 - 578057 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=2800.000000 s hg38.chr20_KI270870v1_alt 44407 2 + 183433 AC s panTro5.chr20 66368749 2 + 66533130 AC i panTro5.chr20 C 0 I 117 s panPan2.chr20 62047839 2 + 62195757 AC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109961970 2 - 110113093 AC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690032 2 - 92844088 GC i rheMac8.chr10 T 63 C 0 s macFas5.chr10 96352668 2 + 96509753 AC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16827027 2 - 16982598 GC i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e gorGor5.CYUI01015848v1 436107 278 - 578057 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=25375.000000 s hg38.chr20_KI270870v1_alt 44409 14 + 183433 ACGCTCCCTCAGTT s panTro5.chr20 66368868 14 + 66533130 ACGCTCCCTCAGTT i panTro5.chr20 I 117 C 0 s panPan2.chr20 62047841 14 + 62195757 ACGCTCCCTCAGTT i panPan2.chr20 C 0 M 2292 s nomLeu3.chr13 109961972 14 - 110113093 ACGCTTCCTCAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690034 14 - 92844088 ACACTCCTTCAGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352670 14 + 96509753 ACGCTCCTTCAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16827029 14 - 16982598 ACGCTCCCTCAGTT i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e gorGor5.CYUI01015848v1 436107 278 - 578057 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=2467.000000 s hg38.chr20_KI270870v1_alt 44423 7 + 183433 TTGTGCG s panTro5.chr20 66368882 7 + 66533130 TTGTGCA i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109961986 7 - 110113093 ACGTGCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690048 4 - 92844088 ---GGCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352684 4 + 96509753 ---GGCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16827043 7 - 16982598 ATCGGCG i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e panPan2.chr20 62047855 2292 + 62195757 M e gorGor5.CYUI01015848v1 436107 278 - 578057 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=13755.000000 s hg38.chr20_KI270870v1_alt 44430 7 + 183433 TCACAAA s panTro5.chr20 66368889 7 + 66533130 TCACAAA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435829 7 - 578057 TCACAAA i gorGor5.CYUI01015848v1 T 278 C 0 s nomLeu3.chr13 109961993 7 - 110113093 TCACAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690052 7 - 92844088 TCACAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352688 7 + 96509753 TCACAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16827050 7 - 16982598 TCACAAA i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e panPan2.chr20 62047855 2292 + 62195757 M e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=5325.000000 s hg38.chr20_KI270870v1_alt 44437 3 + 183433 CAC s panTro5.chr20 66368896 3 + 66533130 CAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050152 3 + 62195757 CAC i panPan2.chr20 M 2292 C 0 s gorGor5.CYUI01015848v1 435836 3 - 578057 TAC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92690059 3 - 92844088 CAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352695 3 + 96509753 CAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16827057 3 - 16982598 CAC i macNem1.NW_012014244v1 C 0 T 70 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109962000 0 - 110113093 C e otoGar3.GL873542 22781516 2368 + 22939663 I a score=32444.000000 s hg38.chr20_KI270870v1_alt 44440 25 + 183433 AGACGCTCCCTCAGTTTTGCGCATC s panTro5.chr20 66368899 25 + 66533130 ACACACTCCCTCAGTTTTGTGCATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050155 25 + 62195757 ACACGCTCCCTCAGTTTTATGCTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435839 25 - 578057 ACACGCTCCCTCAGTTTTGTGCTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962000 22 - 110113093 -CACGCTTCCT--GTTTTGTGCGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690062 25 - 92844088 ACACGCTCCCTCAGTTATCGGCGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352698 25 + 96509753 ACACGCTCCCTCAGTTATCGGCGTC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827060 70 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=45458.000000 s hg38.chr20_KI270870v1_alt 44465 20 + 183433 ACACACACGCTCCCTCAGTT s panTro5.chr20 66368924 20 + 66533130 ACAAACACGCTCGCTCAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050180 20 + 62195757 ACAAACATGCTTCCTCAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435864 20 - 578057 ACAAACACGATTCCTCAGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962022 20 - 110113093 ACAAACACGCTCCCTCAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690087 20 - 92844088 ACAAACACGCTCCCTCAGTT i rheMac8.chr10 C 0 T 152 s macFas5.chr10 96352723 20 + 96509753 ACAAACACGCTCCCTCAGTT i macFas5.chr10 C 0 T 92 s macNem1.NW_012014244v1 16826990 20 - 16982598 ACACACACGCTCCCTCAGTT i macNem1.NW_012014244v1 T 70 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=37724.000000 s hg38.chr20_KI270870v1_alt 44485 32 + 183433 TTGTGTGTCACAAACACACACGCTCCTTCAGT s panTro5.chr20 66368944 32 + 66533130 TTGTGTGTCACAAACACACACGCTCCTTCAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050200 32 + 62195757 TTGTGTGTCACAAACACACACGCTCCTTCAGT i panPan2.chr20 C 0 I 128 s gorGor5.CYUI01015848v1 435884 32 - 578057 TTGTGCATCACAAACACACACGCTCCGTCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962042 32 - 110113093 TTGTGCGTCACAAACACACATGCTCCCTCAGT i nomLeu3.chr13 C 0 C 0 s macNem1.NW_012014244v1 16827010 32 - 16982598 ATCGGCGTCACAAACACGCACGCTCCCTCAGT i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352743 92 + 96509753 T a score=1365.000000 s hg38.chr20_KI270870v1_alt 44517 1 + 183433 T s panTro5.chr20 66368976 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050360 1 + 62195757 T i panPan2.chr20 I 128 C 0 s gorGor5.CYUI01015848v1 435916 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962074 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s macNem1.NW_012014244v1 16827042 1 - 16982598 T i macNem1.NW_012014244v1 C 0 T 149 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352743 92 + 96509753 T a score=4616.000000 s hg38.chr20_KI270870v1_alt 44518 7 + 183433 TTGTGCT s panTro5.chr20 66368977 7 + 66533130 TTGTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050361 7 + 62195757 ATGTGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435917 7 - 578057 ATGTGCG i gorGor5.CYUI01015848v1 C 0 T 95 s nomLeu3.chr13 109962075 7 - 110113093 ACGTGCG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352651 7 + 96509753 ATGGGCG i macFas5.chr10 T 92 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=24547.000000 s hg38.chr20_KI270870v1_alt 44525 26 + 183433 TCACAAACACACACGCTCCCTCAGTT s panTro5.chr20 66368984 26 + 66533130 TCACAAACACACATGCTCCCTCAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050368 26 + 62195757 TCACAAACACGCGCACTCCCTCAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435829 26 - 578057 TCACAAATACACACGCTCCCTCAGTT i gorGor5.CYUI01015848v1 T 95 C 0 s nomLeu3.chr13 109962082 16 - 110113093 TCACAAACACGCGCGC---------- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352658 26 + 96509753 TCACAAACACACACGCTCCTTCAGTT i macFas5.chr10 C 0 T 116 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=863.000000 s hg38.chr20_KI270870v1_alt 44551 11 + 183433 TTGTGCAT---------------------------------CAC s panTro5.chr20 66369010 44 + 66533130 TTGTGCATCACAAACACACACATTCCCTCAGTTTTGTGCGCCAC i panTro5.chr20 C 0 I 168 s panPan2.chr20 62050394 11 + 62195757 TTGTGCGC---------------------------------CAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435855 11 - 578057 TTGTGCTT---------------------------------CAC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109962098 0 - 110113093 C e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352684 116 + 96509753 T a score=273.000000 s hg38.chr20_KI270870v1_alt 44562 1 + 183433 A s panPan2.chr20 62050405 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435866 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66369054 168 + 66533130 I e nomLeu3.chr13 109962098 0 - 110113093 C e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352684 116 + 96509753 T a score=674.000000 s hg38.chr20_KI270870v1_alt 44563 6 + 183433 CACA----CA s panPan2.chr20 62050406 10 + 62195757 AACACGCGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435867 6 - 578057 AACA----CG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96352568 6 + 96509753 CACA----CG i macFas5.chr10 T 116 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e panTro5.chr20 66369054 168 + 66533130 I e nomLeu3.chr13 109962098 0 - 110113093 C e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=87860.000000 s hg38.chr20_KI270870v1_alt 44569 77 + 183433 TTCCCTCAGTTTTGTGCGTCACAAACACGCGTGCTCTCTCAGTTATGTGCGTCACAAACACAGACGCTCCCTCAGTT s panTro5.chr20 66369222 77 + 66533130 CTCCCTCAGTTTTGTGTGTCACAAACACACACGCTCCCTCAGTTATGGACATCACAAACACACACGCTCCCTCAGTT i panTro5.chr20 I 168 C 0 s panPan2.chr20 62050416 77 + 62195757 CTCCCTCAGTTTTGTGCATCACAAACACGCGCGCTCCCTCAGTTATGTGCGTCACAAACACAGACGCTCCCTCAGTT i panPan2.chr20 C 0 T 261 s gorGor5.CYUI01015848v1 435873 77 - 578057 ATTCCTCAGTTTTGTGCATCACAAACACACACGCTCCGTCAGTTATGTGCGTCACAAACACGCGCACTCCCTCAGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962098 76 - 110113093 -TCCCTCAGTTATGTGCGTCACAAATACGCGCGCTCCCTCACTTATATGTGTCACAAACACAGAGGCTCCCTCAGTT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352574 77 + 96509753 CTCCCTCAGTTATGGGCGTCACAAACACACACGCTCCCTCAGTTATGGGCGTCACAAACACACACGCTCCCTCAGTT i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=6514.000000 s hg38.chr20_KI270870v1_alt 44646 12 + 183433 TTGCGCATCACA---- s panTro5.chr20 66369299 12 + 66533130 TTGTGCATCACA---- i panTro5.chr20 C 0 I 4 s gorGor5.CYUI01015848v1 435950 12 - 578057 TTGTGCATCACA---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962174 12 - 110113093 TTGTGCGTCACA---- i nomLeu3.chr13 C 0 I 2 s macFas5.chr10 96352651 16 + 96509753 ATGGGCGTCACAAACA i macFas5.chr10 C 0 T 99 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e panPan2.chr20 62050493 261 + 62195757 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=8240.000000 s hg38.chr20_KI270870v1_alt 44658 16 + 183433 CACACGCTCCCTCAGC s panTro5.chr20 66369315 16 + 66533130 CACACGCTTCCTCAGT i panTro5.chr20 I 4 C 0 s gorGor5.CYUI01015848v1 435962 14 - 578057 CGCGCGCTCTCTGT-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962188 16 - 110113093 CGCGCGCTCCCTCAGT i nomLeu3.chr13 I 2 C 0 s macFas5.chr10 96352568 16 + 96509753 CACACGCTCCCTCAGT i macFas5.chr10 T 99 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e panPan2.chr20 62050493 261 + 62195757 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=37115.000000 s hg38.chr20_KI270870v1_alt 44674 32 + 183433 TTTGTGCTTCACAAACACACACGCTCCCTCAG s panTro5.chr20 66369331 32 + 66533130 TTTGTGCGTCACAAACACACACGCTCCCTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050232 32 + 62195757 TATGGACATCACAAACACACACGCTCCCTCAG i panPan2.chr20 T 261 C 0 s gorGor5.CYUI01015848v1 435976 32 - 578057 TATGTGTGTCACAAACACAGACGCTCCCTCAG i gorGor5.CYUI01015848v1 C 0 T 177 s nomLeu3.chr13 109962204 32 - 110113093 TTTGTGCGTCACAAACACACGCGTTCCCTCAG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352584 32 + 96509753 TATGGGCGTCACAAACACACACGCTCCCTCAG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=6748.000000 s hg38.chr20_KI270870v1_alt 44706 11 + 183433 TTTTGTGTGTT s panTro5.chr20 66369363 11 + 66533130 TTTTGTGCGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050264 11 + 62195757 TTTTGTGTGTT i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109962236 11 - 110113093 TTATGTGCGTC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352616 11 + 96509753 TTATGGGCGTC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e gorGor5.CYUI01015848v1 436008 177 - 578057 T e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=14778.000000 s hg38.chr20_KI270870v1_alt 44717 12 + 183433 ACAAACACACAC s panTro5.chr20 66369374 12 + 66533130 ACAAACACACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050275 12 + 62195757 ACAAACACACAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435831 12 - 578057 ACAAATACACAC i gorGor5.CYUI01015848v1 T 177 C 0 s nomLeu3.chr13 109962247 12 - 110113093 ACAAATACGCGC i nomLeu3.chr13 C 0 T 117 s macFas5.chr10 96352627 12 + 96509753 ACAAACACACAC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=10542.000000 s hg38.chr20_KI270870v1_alt 44729 42 + 183433 GCTCCCTCAGTTTCGTGCATCCCAAAGACGATT----------------------------------------------------------------CCTCAGTTT s panTro5.chr20 66369386 106 + 66533130 GCTCCCTCAGTTTCGTGCATCCCAAACACGATTCCTGTTTTGTGCATCACAAACACACACGCTCTCTCAGTTATGTGCGTCACAAACACGCACACTCCCTCAGTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050287 42 + 62195757 GCTCCCTCAGTTTTGTGCATCCCAAACACGATT----------------------------------------------------------------CCTCAGTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435843 42 - 578057 GCTCCCTCAGTTTTGTGCTTCACAAACACGATT----------------------------------------------------------------CCTCAGTTT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96352639 13 + 96509753 GCTCCCTCAGTTA--------------------------------------------------------------------------------------------- i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e nomLeu3.chr13 109962259 117 - 110113093 T e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=18010.000000 s hg38.chr20_KI270870v1_alt 44771 20 + 183433 TGTGCATCACAAACACATAT s panTro5.chr20 66369492 16 + 66533130 TGTGCATCACAAACAC---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050329 20 + 62195757 TGTGCATCACAAACACACAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435885 20 - 578057 TGTGCATCACAAACACACAC i gorGor5.CYUI01015848v1 C 0 I 33 s nomLeu3.chr13 109962142 20 - 110113093 TATGTGTCACAAACACAGAG i nomLeu3.chr13 T 117 C 0 s macFas5.chr10 96352652 20 + 96509753 TGGGCGTCACAAACACACAC i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=15032.000000 s hg38.chr20_KI270870v1_alt 44791 12 + 183433 GCTCCCTCAGTT s panTro5.chr20 66369508 12 + 66533130 GCTCCCTCAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050349 12 + 62195757 GCTCCGTCAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435938 12 - 578057 ACTCCCTCAGTT i gorGor5.CYUI01015848v1 I 33 C 0 s nomLeu3.chr13 109962162 12 - 110113093 GCTCCCTCAGTT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352672 12 + 96509753 GCTCCTTCAGTT i macFas5.chr10 C 0 T 142 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=8990.000000 s hg38.chr20_KI270870v1_alt 44803 21 + 183433 TTGTGCGTCACAA-----------------------------------ACGCGCGC s panTro5.chr20 66369520 56 + 66533130 TTGTGCATCACAAACACACACATTCCCTCAGTTTTGTGCGCCACAAACACGCGCGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050361 23 + 62195757 ATGTGCATCACAA---------------------------------ACACGCGCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435950 19 - 578057 TTGTGCATCAC-------------------------------------ACGCGCGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962174 21 - 110113093 TTGTGCGTCACAA-----------------------------------ACGCGCGC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96352684 142 + 96509753 T a score=16904.000000 s hg38.chr20_KI270870v1_alt 44824 17 + 183433 TCCCTCAGTTATGTGCG s panTro5.chr20 66369576 17 + 66533130 TCCCTCAGTTTTGTGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050384 17 + 62195757 TCCCTCAGTTTTGTGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 435969 15 - 578057 TCTCT--GTTATGTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962195 17 - 110113093 TCCCTCAGTTTTGTGCG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352542 17 + 96509753 TCCCTCAGTTATGGGCG i macFas5.chr10 T 142 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e chlSab2.chr2 90251747 6 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=51634.000000 s hg38.chr20_KI270870v1_alt 44841 35 + 183433 TCACAAACACAGACGCTCCCTCAGTTTTGCGCATC s panTro5.chr20 66369593 35 + 66533130 TCACAAACACGCGTGCTCCCTCAGTTTTGCGCATC i panTro5.chr20 C 0 I 4 s panPan2.chr20 62050401 35 + 62195757 CCACAAACACGCGCGCTCCCTCAGTTTTGTGCATC i panPan2.chr20 C 0 I 4 s gorGor5.CYUI01015848v1 435984 34 - 578057 TCACAAACACAGACGCTCCCTCAG-TTTGTGCGTC i gorGor5.CYUI01015848v1 C 0 I 4 s nomLeu3.chr13 109962212 35 - 110113093 TCACAAACACACGCGTTCCCTCAGTTATGTGCGTC i nomLeu3.chr13 C 0 I 4 s macFas5.chr10 96352559 35 + 96509753 TCACAAACACACACGCTCCCTCAGTTATGGGCGTC i macFas5.chr10 C 0 T 62 s chlSab2.chr2 90251753 35 - 90373283 TCACAAACACACACGCTCCCTCAGTTATCGGCGTC i chlSab2.chr2 I 6 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e macNem1.NW_012014244v1 16827043 149 - 16982598 T e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=6979.000000 s hg38.chr20_KI270870v1_alt 44876 3 + 183433 ACA s panTro5.chr20 66369632 3 + 66533130 ACA i panTro5.chr20 I 4 C 0 s panPan2.chr20 62050440 3 + 62195757 ACA i panPan2.chr20 I 4 C 0 s gorGor5.CYUI01015848v1 436022 3 - 578057 ACA i gorGor5.CYUI01015848v1 I 4 C 0 s nomLeu3.chr13 109962251 3 - 110113093 ATA i nomLeu3.chr13 I 4 C 0 s macFas5.chr10 96352532 3 + 96509753 ACA i macFas5.chr10 T 62 C 0 s macNem1.NW_012014244v1 16826894 3 - 16982598 ACA i macNem1.NW_012014244v1 T 149 C 0 s chlSab2.chr2 90251788 3 - 90373283 ACA i chlSab2.chr2 C 0 I 4 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e manLeu1.NW_012101652v1 9108 43 - 179258 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=55742.000000 s hg38.chr20_KI270870v1_alt 44879 23 + 183433 CACACGCTCCCTCAGTTTTGTGT s panTro5.chr20 66369635 23 + 66533130 CACACACTCCCTCAGTTTTGTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050443 23 + 62195757 CGCGCGCTCCCTCAGTTATGTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436025 23 - 578057 CGCACGCTCCCTCAGTTTTGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962254 23 - 110113093 CGCGCGCTCCCTCACTTATATGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96352535 23 + 96509753 CACACACTCCCTCAGTTATGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826897 23 - 16982598 CACACACTCCCTCAGTTATGGGC i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90251795 23 - 90373283 CACACGCTCCCTGAGTTATCGGC i chlSab2.chr2 I 4 C 0 s manLeu1.NW_012101652v1 9151 23 - 179258 CACACGCTCCCTCAGTTACGGGC i manLeu1.NW_012101652v1 I 43 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92690107 152 - 92844088 T e otoGar3.GL873542 22781516 2368 + 22939663 I a score=2574.000000 s hg38.chr20_KI270870v1_alt 44902 1 + 183433 G s panTro5.chr20 66369658 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050466 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436048 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962277 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689955 1 - 92844088 G i rheMac8.chr10 T 152 C 0 s macFas5.chr10 96352558 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826920 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90251818 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 9174 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3629891 36 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=113784.000000 s hg38.chr20_KI270870v1_alt 44903 25 + 183433 TCACAAACACACACGCTCCCTCAGT s panTro5.chr20 66369659 25 + 66533130 TCACAAACACACACACTCCCTCAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050467 25 + 62195757 TCACAAACACAGACGCTCCCTCAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436049 25 - 578057 TCACACACACAGACGCTCCCTCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962278 25 - 110113093 TCACAAACACAGAGGCTCCCTCAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689956 25 - 92844088 TCACAAACACGCACGCTCCCTCAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352559 25 + 96509753 TCACAAACACACACGCTCCCTCAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826921 25 - 16982598 TCACAAACACACACGCTCCCTCAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629927 25 - 3785965 TCACAAACACACACGCTCCCTCAGT i cerAty1.NW_012001373v1 I 36 C 0 s chlSab2.chr2 90251819 25 - 90373283 TCACAAACGCACACGCTCCCTGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 9175 25 - 179258 TCACAGACGCACACGCTCCCTCAGT i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220229 38 + 16356641 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=-7870.000000 s hg38.chr20_KI270870v1_alt 44928 5 + 183433 --TTTGC s panTro5.chr20 66369684 5 + 66533130 --TTTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050492 4 + 62195757 --TTC-T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436074 4 - 578057 --TTG-T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962303 5 - 110113093 --TTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689981 5 - 92844088 --TATGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352584 5 + 96509753 --TATGG i macFas5.chr10 C 0 I 129 s macNem1.NW_012014244v1 16826946 5 - 16982598 --TATGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629952 5 - 3785965 --TATGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251844 5 - 90373283 --TATCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 9200 5 - 179258 --TACGG i manLeu1.NW_012101652v1 C 0 C 0 s saiBol1.JH378156 16220267 5 + 16356641 TTTCT-- i saiBol1.JH378156 I 38 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e calJac3.chr5 58155074 43 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=18185.000000 s hg38.chr20_KI270870v1_alt 44933 3 + 183433 GCA s panTro5.chr20 66369689 3 + 66533130 GCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050496 3 + 62195757 GCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436078 3 - 578057 GCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962308 3 - 110113093 GCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689986 3 - 92844088 GCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352718 3 + 96509753 GCG i macFas5.chr10 I 129 C 0 s macNem1.NW_012014244v1 16826951 3 - 16982598 GCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3629957 3 - 3785965 GCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251849 3 - 90373283 GCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 9205 3 - 179258 GCG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58155117 3 + 159171411 GCA i calJac3.chr5 I 43 C 0 s saiBol1.JH378156 16220272 3 + 16356641 GCG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e cebCap1.NW_016107870v1 1085503 53 + 1231380 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=89684.000000 s hg38.chr20_KI270870v1_alt 44936 14 + 183433 TCACAAACACACAC s panTro5.chr20 66369692 14 + 66533130 TCACAAACACACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050499 14 + 62195757 TCCCAAACACGCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436081 14 - 578057 TCACGAACACGCGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962311 14 - 110113093 TCACAAACACACAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92689989 14 - 92844088 TCACAAACACGCAC i rheMac8.chr10 C 0 I 92 s macFas5.chr10 96352721 10 + 96509753 TCACAAACAC---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16826954 14 - 16982598 TCACAAACACACAC i macNem1.NW_012014244v1 C 0 I 92 s cerAty1.NW_012001373v1 3629960 14 - 3785965 CCACAAACACACAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251852 14 - 90373283 TCACAAACGCACAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 9208 14 - 179258 TCACAGACGCACAC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58155120 14 + 159171411 TCACAAGCACACAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220275 14 + 16356641 TCACAAGCACACAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085556 14 + 1231380 TCACAAGCACACAC i cebCap1.NW_016107870v1 I 53 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=360897.000000 s hg38.chr20_KI270870v1_alt 44950 55 + 183433 GCTCCCTCAGTT--------------------------------------------------------------GTCAGGGGACTTTGCACTGTGCCTTTGCATGAAACACCATGGC s panTro5.chr20 66369706 117 + 66533130 ACTCCCTCAGTTTTGTGCTTCACAAACATGCTTCCTCAGTTTTGTGTGTCACAAACACACACGCTCCCTCAGTTGTCAGGGGACTTTGCACTGTGCCTTTGCATGAAACACCATGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050513 55 + 62195757 GCTCCCTCAGTT--------------------------------------------------------------GTCAGGGGACTTTGCACTGTGCCTTTGCATGAAACACCATGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436095 55 - 578057 GCTCCCTCAGTT--------------------------------------------------------------GTCAGGGGACTTTGCATTGTGCCTTTGCATGAAACACCATGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962325 55 - 110113093 CCTCCCTCAGTT--------------------------------------------------------------GTCAGGGGACTTTGCACTGTGCCTTTGCATGAAACACCATGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690095 55 - 92844088 GCTCCCTCAGTT--------------------------------------------------------------GTCAGGGGACTTTGAACTGTGCCTTTCCATGAAACCCCATGGC i rheMac8.chr10 I 92 C 0 s macFas5.chr10 96352731 55 + 96509753 GCTCCCTCAGTT--------------------------------------------------------------GTCAGGGGACTTTGAACTGTGCCTTTCCATGAAACCCCATGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16827060 55 - 16982598 GCTCCCTCAGTT--------------------------------------------------------------GTCAGGGGACTTTGAACTGTGCCTTTCCATGAAACCCCATGGC i macNem1.NW_012014244v1 I 92 C 0 s cerAty1.NW_012001373v1 3629974 55 - 3785965 GCTCCCTCAGTT--------------------------------------------------------------GTCAGGGGACTTGGAACTGTGCCTTTCCATGAAACCCCATGGC i cerAty1.NW_012001373v1 C 0 I 360 s chlSab2.chr2 90251866 55 - 90373283 GCTCCCTCAGTT--------------------------------------------------------------GTCAGAGGACTTTGAACTGTGCCTTTCCATGAAACCCCATGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 9222 55 - 179258 GCTCCCTCAGTT--------------------------------------------------------------GTCAGGGGACTTGGAACTGTGCCTTTCCATGAAACCCCATGGC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58155134 55 + 159171411 GCTCCCTCAGTT--------------------------------------------------------------GTCCAGGGTCTGTGCCCTGTGCCCTTCTGTGAAACGCCAAGGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220289 55 + 16356641 GGCCCCTCAGTT--------------------------------------------------------------GTCTGGGGACTGTGTGCTGTGCCCTTCCGTGAAACGCCAAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085570 55 + 1231380 GCTCCCTCAGTT--------------------------------------------------------------GTCCGGGGACTGTGCACTGTGCCCTTCCGTGAAACGCCAAGGC i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=63176.000000 s hg38.chr20_KI270870v1_alt 45005 13 + 183433 TTGAAGAGGTCCC s panTro5.chr20 66369823 13 + 66533130 TTGAAGAGGTCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62050568 13 + 62195757 TTGAAGAGGTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436150 13 - 578057 TTGGAGAGGTCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962380 13 - 110113093 TTAGAGAGGTCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690150 13 - 92844088 TTGGAGAGGTCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352786 13 + 96509753 TTGGAGAGGTCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16827115 13 - 16982598 TTGGAGAGGTCCA i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90251921 13 - 90373283 TTGGAGAGGTCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 9277 13 - 179258 TTGGAGAGGTCCA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58155189 13 + 159171411 TTGGGAAGGTCTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220344 13 + 16356641 CTGGGGAGGTCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085625 12 + 1231380 CTGGGT-GGTCTC i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e cerAty1.NW_012001373v1 3630029 360 - 3785965 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=195290.000000 s hg38.chr20_KI270870v1_alt 45018 30 + 183433 GCATCGTTAGGGCCCCCTTGCccatggtgt s panTro5.chr20 66369836 30 + 66533130 GCATCGTTAGGGCCCCCTTGCCCATGGTGT i panTro5.chr20 C 0 I 216 s panPan2.chr20 62050581 30 + 62195757 GCATCGTTAGGGCCCCCTTGCCCATGGTGT i panPan2.chr20 C 0 I 216 s gorGor5.CYUI01015848v1 436163 30 - 578057 GCATCATTAGGGCCCCCTTGCCCATGGTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962393 30 - 110113093 GCATCGTTAGGGCCCCCTTGCccatggtgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690163 30 - 92844088 GCATTGTTAGGGCCCCCTTACccatggtgt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352799 30 + 96509753 GCATTGTTAGGGCCCCCTTACCCATGGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16827128 30 - 16982598 GCATTGTTAGGGCCCCCTTACCCATGGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3630389 30 - 3785965 GCATTGTTAGGGCCCCCTTACccatggtgt i cerAty1.NW_012001373v1 I 360 C 0 s chlSab2.chr2 90251934 30 - 90373283 GCATTGTTAGGGCCCCCTTACCCATGGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 9290 30 - 179258 GCATTGTTAGGGCCCCCTTACCCATGGTGT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58155202 29 + 159171411 ACCTTTTTAGGG-CCCCTCGTCCGTGGTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16220357 29 + 16356641 ACCTTGTTAGGG-CCCCTCGTCCGTGATGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1085637 29 + 1231380 ACCTTGTTAGGG-ACCCTTGTCGGtggtgt i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=2247454.000000 s hg38.chr20_KI270870v1_alt 45048 383 + 183433 ggcgtcccctgaccgatttagccgttattgagagacagccaggttgctttcaacgttttctttttcacagacagtggtgccaaaggcgtccttggacatgagtcgtctcccagtgggtgagcacatcttagggcagatttctgaaggaagatgtgccaggcagagggg-gtctgaagttttaactttgaagggcgtattgtcacactgccctccacagagcttgtaccaCGGAGGTGGTGGCAGTGTCTTGCTGCCCATGCCTTCCTAATGTGTGTGTTGTGAAGTCTCTCGTTCTTTCTTTTT-AAAAATTTA-TTatctttaattttttaaaatgtagagacagggcctcactatgttgctcaggctggtctcgaactcttggg s panTro5.chr20 66370082 383 + 66533130 GGCGGCCCCTGACCGATTTAGCCGTtattgagggacagccaggttgctttcaacgttttctttttcacagacagtggtgccaaaggcgtccttggacatgagtcgtctcccagtgggtgagcacatcttagggcagatttctgaaggaagatgtgccaggcagagggg-gtctgaagttttaactttgaagggcttattgtcacactgccctccacagagcttgtactaCGGAGGTGGTGGCAGTGTCTTGCTGCCCATGCCTTCCTAATGTGTGTGTTGTGAAGTCTCTCGTTCTTTCTTTTT-AAAAATTTA-TTatctttaattttttaaaatgtagagacagggcctcactatgttgctcaggctggtctcgaactcttgga i panTro5.chr20 I 216 C 0 s panPan2.chr20 62050827 383 + 62195757 GGCGGCCCCTGACCGATTTAGCCGTtattgagagacagccaggttgctttcaacattttctttttcacagacagtggtgccaaaggcgtcgttggacatgagtcgtctcccagtgggtgagcacatcttagggcagatttccgaaggaagatgtgccaggcagagggg-gtctgaagttttaactttgaagggcttattgtcacactgctctccacagagcttgtaccaCGGAGGTGGTGGCAGTGTCTTGCTGCCCATGCCTTCCTAATGTGTGTGTTGTGAAGTCTCTCGTTCTTTCTTTTT-AAAAATtta-ttatctttaatttttttaaatatagagacagggcctcactatgttgctcaggctggtctcgaactcttgga i panPan2.chr20 I 216 C 0 s gorGor5.CYUI01015848v1 436193 383 - 578057 GGCGGCCCCTGACCGATTTAGCCGTtattgagggacatccaggttgctttcaacgttttctttttcacagacagtggtgccaaaggcgtccttggacatgagtcgtctcccagtgggtgagcacatcttagggcagatttctgaaggaagatgtgccaggcagagggg-gtctgaagttttaactttgaagggcttattgtcacattgccctccacagagcttgtaccaCGGAGGTGGTGGCAGTGTCTTGCTGCCCATGCCTTCCTAATGTGTGTGTTGTGAAGTCTGTCGTTCTTTCTTTTT-AAAAAttta-ttatctttaattttttaaaatatagagacagggcctcactatgttgctcaggctggtctcgaactcttgga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962423 376 - 110113093 ggcggcgcctgaccgatttagccgttattgagggacagccaggttgctttcaacgttttctttttcaccgacagtggtgccaaaggcgtccttggacatgagtcgtctcccagtgggtgagcacatcttagggcagatttctgaaggtacatgtgccaggcagaagggtgtctgaagttttgacttggaagggcttattgtgacactgcccttcacagagcttgtaccaCGGAGGTGGTAGCAGTGCCTTGCTGCCCATGCCTTCCTAATGTGTGTGTTGTGAAGTCTCTCG----TTCTTTTT-AAAAATTTA-ttatctttaattttttaaaat----agacagggcctgactatgttgctcaggctggtctggaactcttggg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690193 328 - 92844088 ggcggtccctgaccaatttagccattgttgagggacatccgggttgctttcaatgtt---tttttcacagacagtggtgccaaaggtgtccttggacatgagtcatctcccggtgggtgagcacatcttaggaccgatttctgaaagcagatgtgccaggcagaaggg----------------------------------------------------CTTGTACTGCGGAGGTGG-GGCAGTGTCGTGCTGCCTGTGCTTTCCTAAAGTGTGTGTTGTGAAGTCTCTGGTTC-TTCTTTTT-AAAATTTTATTTAtttttaattttttaaaatatagagacagggcctcactatgttgctcaggctggtcttgaactcttggg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96352829 329 + 96509753 GGCGGTCCCTGACCAATTTAGCCATTGTTGAGGGACATCCGGGTTGCTTTCAATGTT---TTTTTCACAGACAGTGGTGCCAAAGGTGTCCTTGGACATGAGTCATCTCCCGGTGGGTGAGCACATCTTAGGACAGATTTCTGAAAGCAGATGTGCCAGGCAGAAGGG----------------------------------------------------CTTGTACTGCGGAGGTGG-GGCAGTGTCGTGCTGCCTGTGCTTTCCTAAAGTGTGTGTTGTGAAGTCTCTGGTTCTTTCTTTTT-AAAATTTTATTTAtttttaattttttaaaatatagagacagggcctcactatgttgctcaggctggtcttgaactcttggg i macFas5.chr10 C 0 I 5205 s macNem1.NW_012014244v1 16827158 329 - 16982598 GGCGGTCCCTGACCAatttagccattgttgagggacatccgggttgctttcaatgtt---tttttcacagacagtggtgccaaaggtgtccttggacatgAGTCATCTCCCGGTGGGTGAGCACATCTTAGGACAGATTTCTGAAAGCAGATGTGCCAGGCAGAAGGG----------------------------------------------------CTTGTACCGCGGAGGTGG-GGCAGTGTCGTGCTGCCTGTGCTTTCCTAAAGTGTGTGTTGTGAAGTCTCTGGTTCTTTCTTTTT-AAAATTTTATTTAtttttaattttttaaaatatagagacagggcctcactatgttgctcaggctggtcttgaactcttggg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3630419 329 - 3785965 ggcggtccctgaccgatttagccattactgagggacatccgggttactttcaatgtt---tttttcacagacagtggtgccaaaggtgtccttggacatgagtcatctcccggtgggtgagcacatcttaggacagatttctgaaagcagatgtgccaggcagaaggg----------------------------------------------------cttgtacCACGGAGGTGG-GGCAGTGTCGTGCTACCTGTGCCTTCCTAAAGTGTGTGTTGTGAAGTCTCTGGTTCTTTCTTTTT-AAAAATTTATTTATCTTTAattttttaaaatatagagacagggcctcactatgttgctcaggctggtcttgaactcttggg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90251964 329 - 90373283 GGCGGTCCCTGACCAATTTAGCCATTATTGAGGGACATCCGGGTTGCTTTCAATGTT---TTTTTCACAGACAGTGGTGCCAAAGGTGTCCTTGGACATGAGTCATCTCCCGGTGGGTGAGCGCATCTTAGGACAGATTTCTGAAAGCAGATGTGCCAGGCAGAAGGG----------------------------------------------------CTTGTACCACGGAGGTGG-GGCAGTGTCGTGCTGCCTGTGCCTTCCTAAAGTGTGTGTTGTGAAGTCTCTGGTTCTTTCTTTTT-TAAAATTTATTTAtttttaattttttaaaatatagagacagggcctcactatgttgctcaggctggtcttgaactcttggg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 9320 329 - 179258 GGCGGTCCCTGACCGATTTAGCCATTGTTGAGGGACATCCGGGTTGCGTTCACCGTT---TTTTTCACAGACAGTGGTGCCAAAGGTGTCCTTGGACATGAGTCATCTCCCGGTGGGTGAGCACATCTTAGGACAGATTTCTGAAAGCAGATGTGCCAGGCAGAAGGG----------------------------------------------------CTTGTCCCGCGGAGGTGG-GGCAGCGTCGTGCTGCCTGTGCCTTCCTAAAGTGTGTGTTGTGAAGTCTCTGGTTCTTTCTTTTT-AAAAATTTATTTatctttaactttttaaaatgtagagacagggcctcactgtgttgctcaggctggtcttgaactcttggg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58155231 374 + 159171411 GGCTGTCCCTGACTGAGGTAGCCATtgttgagggacatctgggttgttttcaatgt----ttttttgcagacagtggtgctgaaggcttccgtggacaggagtcatctgctggtgggtgggtacagcttagga-agatttctgaaagtagatgtgccaggcgggagggtgtctgcagttttaattt--gaggagctattgtcacactgccctccacaGACCTGGTGCCACAGAGACGGTGGTGGTGTCTTGCTGCCCATGCCTTCCTAATGTGTGTATTGT-AAGTCTCTGGTTCTTTCTTTTCAAAAAAt----ttctttttaattttttaacatatagacacagggcctcactatgttgtcaaggctggtctcgaactcttggg i calJac3.chr5 C 0 I 384 s saiBol1.JH378156 16220386 374 + 16356641 GGCTGTCCCTGACTGATGTAGCCATTGCtgagggacttctgggctgttttcaatgt----tttcttgcagacagtggtgctgaaggcttccatggacaggagtcatttgctggtgggtgggtacagcttagga-agatttctgaaagtagatgtgccaggcgggagggtgtctgcagttttaattt--gaggagctattgtcacattgccctccacagacctggtaccaCAGAGGTGGAGGCAGCATCTTGCTGCCCATGCCTTCCTAATGTGTGCATTGCAAAGTCTCTGGTTCTTTCTTTTT-AAAAAT----TTatttttaatttttaaaaatatagacacaggacctcactatgttgtcaaggctggtctcaaactcttggg i saiBol1.JH378156 C 0 I 379 s cebCap1.NW_016107870v1 1085666 373 + 1231380 ggctgtccctgactgatgtagccattgttgagggacatctgggttgttttcaatgt----tttcttgcaggccgtggtgctgaaggcttccttggacaggcgccatttgctggtgggtgggtacagcttaggg-atatttctgaaagtaggcatgccaggcgggagggtgtctgcagttttaatct--gaggagctgttgtcacactgcccgccacagACCTGGTACCACAGAGGTGGTGGCAGTGTCTTGCTGCCCATGCC-TCCTAATGTGTGTATTGTGAAGTCTCTGGTTCTTTCTTTTC-AAAAAT----TTatttttaatttttaaaagtatagacacagggcctcactatgttgtcaaggctggtcttgaactcttggg i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=10505.000000 s hg38.chr20_KI270870v1_alt 45431 2 + 183433 ct s panTro5.chr20 66370465 2 + 66533130 ct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051210 2 + 62195757 ct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436576 2 - 578057 ct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962799 2 - 110113093 ct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690521 2 - 92844088 ct i rheMac8.chr10 C 0 I 421 s macNem1.NW_012014244v1 16827487 2 - 16982598 ct i macNem1.NW_012014244v1 C 0 I 604 s cerAty1.NW_012001373v1 3630748 2 - 3785965 ct i cerAty1.NW_012001373v1 C 0 I 419 s chlSab2.chr2 90252293 2 - 90373283 ct i chlSab2.chr2 C 0 I 463 s manLeu1.NW_012101652v1 9649 2 - 179258 ct i manLeu1.NW_012101652v1 C 0 I 411 s cebCap1.NW_016107870v1 1086039 2 + 1231380 ct i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e colAng1.NW_012114444v1 5502858 1145 - 5823884 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220760 379 + 16356641 I e calJac3.chr5 58155605 384 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I e macFas5.chr10 96353158 5205 + 96509753 I a score=7800.000000 s hg38.chr20_KI270870v1_alt 45433 1 + 183433 c s panTro5.chr20 66370467 1 + 66533130 c i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051212 1 + 62195757 c i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436578 1 - 578057 c i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962801 1 - 110113093 c i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690944 1 - 92844088 c i rheMac8.chr10 I 421 C 0 s macFas5.chr10 96358363 1 + 96509753 c i macFas5.chr10 I 5205 C 0 s macNem1.NW_012014244v1 16828093 1 - 16982598 c i macNem1.NW_012014244v1 I 604 C 0 s cerAty1.NW_012001373v1 3631169 1 - 3785965 c i cerAty1.NW_012001373v1 I 419 C 0 s chlSab2.chr2 90252758 1 - 90373283 c i chlSab2.chr2 I 463 C 0 s manLeu1.NW_012101652v1 10062 1 - 179258 c i manLeu1.NW_012101652v1 I 411 C 0 s colAng1.NW_012114444v1 5504003 1 - 5823884 c i colAng1.NW_012114444v1 I 1145 C 0 s cebCap1.NW_016107870v1 1086041 1 + 1231380 c i cebCap1.NW_016107870v1 C 0 I 674 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e saiBol1.JH378156 16220760 379 + 16356641 I e calJac3.chr5 58155605 384 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=938931.000000 s hg38.chr20_KI270870v1_alt 45434 113 + 183433 taatttttgtatttttagtagagacaaggttttgccatattggccagggtggtctcgaactcctgacctcaagtgatccgcctggct----cggcctcccagaatactgggattaca s panTro5.chr20 66370468 113 + 66533130 taatttttgtatttttagtagagacaaggttttgccatattggccagggtggtctcgaactcctgacctcaagtgatccacctggct----cagcctcccagaatactgggattaca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051213 113 + 62195757 taatttttgtatttttagtagagacaaggttttgccatattggccagggtggtctcgaactcctgacctcaagtgatccgcctggct----cggcctcccagaatactgggattaca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436579 113 - 578057 taatttttgtatttttagtagagacaaggttttgccatattggccagggtggtctcgaactcctgacctcaagtgatccgcctggct----cggcctcccagaatactgggattaca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962802 113 - 110113093 taatttttgtatttttagtagagacaaggttttgccatattggccagggtggtctcgaactcctgacctcaagtgatccgcctggct----cggcctcccagaatactgggattaca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92690945 113 - 92844088 taatttttgtatttttagtagagacagggttttgccatattggccagggtggtctcgaactcctgacctcatgtgatccgcccagct----tggcctcccagcatactgggattaca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96358364 113 + 96509753 taatttttgtatttttagtagagacagggttttgccatattggccagggtggtctcgaactcctgacctcacgtgatccgcccagct----tggcctcccagcatactgggattaca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16828094 113 - 16982598 taatttttgtatttttagtagagacagggttttgccatattggccagggtggtctcgaactcctgacctcacgtgatccgcccagct----tggcctcccagcatactgggattaca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3631170 113 - 3785965 taatttttgtatttttagtagagacagggttttgccatattggccagggtggtctcgaactcctgacctcacgtgatcctcccagct----tggcctcccagcatactgggattaca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90252759 113 - 90373283 taatttttgtatttttagtagagacagggttttgccatattggccagggtggtctcgaactcctgacctcatgtgatccgcccagct----tggcctcccagcatactgggattaca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 10063 112 - 179258 taatttttgtatttttagtagagaca-ggttttgccatattggccagggtggtctcgaactcctgacctcacgtgatcctcccagct----tggcctcccagcatagtgggattaca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5504004 112 - 5823884 taatttttgtatttttagtagagacg-ggttttgccatattggccagggtggtctcgaactcctgacctcacgtgatccgcccaact----cggcctcccagcatactgggattaca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58155989 113 + 159171411 taatttttgtattttcattagagatggggttttgacatattggccagggtggtctcgaactcctgaactcaagtgatctgctggcct----cagcctctcatagggctgggactaca i calJac3.chr5 I 384 C 0 s saiBol1.JH378156 16221139 117 + 16356641 taatttttatatttttattagagatggggtttcgacatattggccagggtggtcttgaactcctgaactcaagtgatctgcccgccttggccagcctctcatagggctgggactaca i saiBol1.JH378156 I 379 C 0 s cebCap1.NW_016107870v1 1086716 113 + 1231380 taatttttgtatttttattagagatggggtttcgacatattggccagtgtggtctcggactcctgaatgcaagtgatctgcccgcct----cggcctctcatagggctgcgactaca i cebCap1.NW_016107870v1 I 674 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22781516 2368 + 22939663 I a score=858100.000000 s hg38.chr20_KI270870v1_alt 45547 107 + 183433 ggccc-ttgacccatttttcttattgtgttgttggattttgtcttattgatttgtacggggcgtttacatattaaggaacttaCACCTACATACTTGCAGATA-TTTTT s panTro5.chr20 66370581 106 + 66533130 ggccc-ttgacccatttttcttattgtgttgttggattttgtcttattgatttgtatggg-cgtttacatattaaggaacttaCACCTACATACTTGCAGATA-TTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051326 108 + 62195757 ggccc-ttgacccatttttcttattgtgttgttggattttgtcttattgatttgtacggggcatttacatattaaggaacttaCACCTACATACTTGCAGATATTTTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436692 107 - 578057 ggcCC-TTGACCCTTtttttttattgtgttgttggattttgtcttattgatctgtacggggcgtttacatattaaagaacttaCACCTACATACTTACAGATA-TTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109962915 106 - 110113093 ggccc-ttgacccatttttctcattgcgttgttgggttttgtcttactgatttgtatggggcgtttacatattaaggaccttaCACCTACATACTTGCAGAT--TTTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92691058 108 - 92844088 taccc-ttgacacatttttcttattgcattgttgggttttgtcttattgatttgtacagggtgtttacatattaaggGCCTTACACCTAAATACTTGCAGATTGTTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96358477 108 + 96509753 gaccc-ttgacacatttttcttattgcattgttgggttttgtcttattgatttgtacagggtgtttacatattaaggGCCTTACACCTAAATACTTGCAGATTGTTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16828207 108 - 16982598 gaccc-ttgacacatttttcttattgcattgttgggttttgtcttattgatttgtacagggtgtttacatattaaggGCCTTACACCTAAATACTTGCAGATTGTTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3631283 108 - 3785965 gaccc-ttgacacatttttcttattgcattgttgggttttgtcttattgatttgtacagggtgtttacatattaaggGCCTTATACCTAAATACTTGCAGATTGTTTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90252872 108 - 90373283 gaccc-ttgacacatttttcttattgtattgttgggttttgtcttattgatttgtacaaggtgtttacatattaaggGCCTTACGCCTAAATACTTGCAGTTTTTTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 10175 108 - 179258 gaccc-ttgacacatttttcttattgcattgttgggttttgtcttattgatttgtacagggtgtttacatattagggGCCTTACACCTAAATACTTGCAGATTGTTTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5504116 107 - 5823884 gaccc-ttgacacatttttcttattgcattgttgagctttgtcttattgatttgtacagggtgtttacatattaaggGCCTTACACCTAAATACTTGCAGATT-TTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58156102 101 + 159171411 agcccttttaccca-ttttcttattgggtcgttggactttgtcttattgatctgtacagggcatttacatattaagggttttaCACCTACATACTTACAAAT------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16221256 100 + 16356641 agccc-tttaccca-gtttcttatttggttgttggagtttgtcttattgatctgtacagggtatttacatattaaggGCTTTATACCCACATACTTGCAAAT------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1086829 100 + 1231380 Aaccc-tttactca-ttttcttattgggttgttggactttgtcttattgatctgcacagggcatttacatattaagggctttacacctacatacttgcaaat------- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22783884 106 + 22939663 GGGcc-ctgaccca-cttttttattgagttgttggaccttgtcttattgatttgtatagtctttttacatattaaggGCTTTATCTCTAAATACTCGCACATATTTTT- i otoGar3.GL873542 I 2368 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=150158.000000 s hg38.chr20_KI270870v1_alt 45654 20 + 183433 TTCATTTTTTT--CTTAAAAAA s panTro5.chr20 66370687 20 + 66533130 TTCATtttttt--cttaaaaaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051434 22 + 62195757 TTCATTTTTTTTCTTTAAAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436799 20 - 578057 TTCATTTTTTT--CTTAAAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109963021 21 - 110113093 TTCATTTTTTTT-CTTAAAAAA i nomLeu3.chr13 C 0 I 300 s rheMac8.chr10 92691166 20 - 92844088 TACATTTTTTT--CTTAAAAAA i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96358585 20 + 96509753 TACATTTTTTT--CTTAAAAAA i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16828315 20 - 16982598 TACATTTTTAT--CTTAAAAAA i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3631391 20 - 3785965 TACATTTTTTT--CTTAAAAAA i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90252980 20 - 90373283 TACAttttttt--cttaaaaaa i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 10283 20 - 179258 TACATTTTTTT--CTTAAAAAA i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5504223 20 - 5823884 TACATTTTTTT--CTTAAAAAA i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chr5 58156203 17 + 159171411 ---Attttttc--cttaaaaaa i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16221356 17 + 16356641 ---Attttttc--cttaaaaaa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1086929 17 + 1231380 ---attttttc--cTTAAAAAA i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22783990 0 + 22939663 C a score=889812.000000 s hg38.chr20_KI270870v1_alt 45674 100 + 183433 tttt--cttttgagagacagaggtctcactgtgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcagcctctcaagcagctgggt s panTro5.chr20 66370707 100 + 66533130 tttt--cttttgagagacagaggtctcactgtgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcagcctctcaagcagctgggt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051456 102 + 62195757 tttttctttttgagagacagaggtctcactgtgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcagcctctcaagcagctgggt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436819 100 - 578057 tttt--cttttgagagacagaggtctcactgtgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcagcctctcaagcagctgggt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109963342 100 - 110113093 tttt--cttttgagagacagaggtctcactgtgttgcccaggctggtctcaaactcctgagctcaagggaccctcccatctcagcctctcaagcagctgggt i nomLeu3.chr13 I 300 C 0 s rheMac8.chr10 92691187 99 - 92844088 -ttt--tttttgggagacagaggtctcgctatgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcaacctctcaagcagctggga i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96358606 99 + 96509753 -ttt--tttttgggagacagaggtctcgctatgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcaacctctcaagcagctggga i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16828336 99 - 16982598 -ttt--tttttgggagacagaggtctcgctatgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcaacctctcaagcagctggga i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3631412 100 - 3785965 tttt--tttttgggagacagaggtctcactatgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcaacctctcaagcagctggga i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90253001 99 - 90373283 -ttt--tttttgggagacacaggtctcactttgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcaacctctcaagcagctggga i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 10304 100 - 179258 tttt--tttttgggagacagaggtctcactatgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcaacctctcaagcagctggga i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5504244 100 - 5823884 AAtt--cttttgggagacagaggtctcactatgttgcccaggctggtctcaaactcctgagctcaagggatcctcccatctcaacctctcaagcagctggga i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chr5 58156220 99 + 159171411 attt--cttttgggagacggg-gtctcactatgctgcccaggctggtctcaaactcctgagctcacgggatcctcccatctcagcctctcgagcagctggga i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16221373 100 + 16356641 attt--cttttgggagacgggagtctcactatgctgcccaggctggtctcaaactcctgagctcacgggatcctcccatctcagccccttgagcagctggga i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1086946 100 + 1231380 tttt--cttttgggagacgggagtctcactatgctgcccagcctggtctcaaactcctgagctcacaggatcctcccatctcagcccctcgagcagctggga i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e canFam3.chr24 47556249 568 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22783990 0 + 22939663 C a score=185366.000000 s hg38.chr20_KI270870v1_alt 45774 24 + 183433 ccacaggtatgtggcaccacctcc s panTro5.chr20 66370807 24 + 66533130 ccacaggtgtttggcaccacctcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051558 24 + 62195757 ccacaggtatttggcaccacctcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436919 24 - 578057 ccacaggtgtgtggcaccacctcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109963442 24 - 110113093 ccacaggtgtgtggcacccccccc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92691286 23 - 92844088 ccacaggtgtgtggcacc-cctcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96358705 23 + 96509753 ccacaggtgtgtggcacc-cctcc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16828435 23 - 16982598 ccacaggtgtgtggcacc-cctcc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3631512 23 - 3785965 ccacaggtgtgtggcacc-cctcc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90253100 24 - 90373283 ccacaggtgtgtggcaccacctcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 10404 23 - 179258 ccacaggtgtgtggcacc-cctcc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5504344 24 - 5823884 ccacaggtgtgtggcaccacCTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58156319 24 + 159171411 ccccaagtgtgtggcatcacCTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16221473 24 + 16356641 cctcaggtgtgtggcatcacCTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087046 24 + 1231380 cctcaggtgtgtggcatcacCTGC i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47556817 24 + 47698779 ccccaaatacttgcaaatagtttt i canFam3.chr24 I 568 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22783990 0 + 22939663 C a score=93213.000000 s hg38.chr20_KI270870v1_alt 45798 12 + 183433 cctggtttg--tta- s panTro5.chr20 66370831 12 + 66533130 cctggtttg--tta- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051582 12 + 62195757 cctggtttg--tta- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436943 12 - 578057 cctggtttg--tta- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109963466 14 - 110113093 CCCCCCCCGGTTTA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92691309 12 - 92844088 cCTGGTTTG--TTG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96358728 12 + 96509753 cCTGGTTTG--TTG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16828458 12 - 16982598 cCTGGTTTG--TTG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3631535 12 - 3785965 cCTGGTTTG--TTG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90253124 12 - 90373283 cctggtttg--ttg- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 10427 12 - 179258 cCTGGTTTG--CTG- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5504368 12 - 5823884 CCTGGTTTG--TGA- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58156343 12 + 159171411 CCTGGTTTG--TCA- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16221497 13 + 16356641 CCTGGTTTG--TCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087070 12 + 1231380 CCTGGTTTG--TCA- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22783990 12 + 22939663 CTTGGTTTG--TTG- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47556841 12 + 47698779 cttcctttg--tcc- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e dasNov3.JH569290 191352 505 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=1008708.000000 s hg38.chr20_KI270870v1_alt 45810 123 + 183433 tttgacttttGTCTTTGCTTAAGG-AG-TTTTGCCATAGAGAATTTTCTTTTTATTACATGAGGTAATTAATCTTTT--------------------TCATAA--TATCCCCCGTCCCCCATGCTTTCTTCTAGTAC-----------TATTTAAATT s panTro5.chr20 66370843 123 + 66533130 tttgacttttGTCTTTGCTTAAGG-AG-TTTTGCCTTAGAGAATTTTCTTTTTATTACATGAGGTAATTAATCTTTT--------------------TCATAA--TATCCCCCGTCCCCCATGCTTTCTTCTAGTAC-----------TATTTAAATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051594 123 + 62195757 tttgacttttGTCTTTGCTTAAGG-AG-TTTTGCCTTAGAGAATTTTCTTTTTATTACATGAGGTAATTAATCTTTT--------------------TCATAA--TATCCCCCGTCCCCCATGCTTTCTTCTAGTAC-----------TATTTAAATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 436955 123 - 578057 tttgacttttGTCTTTGCTTAAGG-AG-TTTTGCCGTAGAGAATTTTCTTTTTATTACATGAGGTAATTAATCTTTT--------------------TCATAA--TATCCCCCGTCCCCCATGCTTTCTTCTAGTAC-----------TATTTAAATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109963480 123 - 110113093 TTTGACTTTTGTCTTTGCTTAAAG-AG-TTTTGCCATAGATAATTTTCTTTTTATTACATGAGGTAATTAATCTTTT--------------------TCATAA--TATCGCCCATCCCCCATGCTTTCTTCTAGTAC-----------TATTTAAATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92691321 123 - 92844088 TTTGACTTTTGTCTTTGCTTAAGG-AG-TTTTGCCATATATAATTTTCTTTTTATTACATGAGGTAATTAATAATTT--------------------TCATAA--TATTCCCCATCCCCCATGCTTTCTTCTAGTAC-----------TATTTACATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96358740 123 + 96509753 TTTGACTTTTGTCTTTGCTTAAGG-AG-TTTTGCCATATATAATTTTCTTTTTATTACATGAGGTAATTAATAATTT--------------------TCATAA--TATTCCCCATCCCCCATGCTTTCTTCGAGTAC-----------TATTTACATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16828470 123 - 16982598 TTTGACTTTTGTCTTTGCTTAAGG-AG-TTTTGCCATATATAATTTTCTTTTTATTACATGAGGTAATTAATAATTT--------------------TCATAA--TATTCCCCATCCCCCATGCTTTCTTCTAGTAC-----------TATTTACATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3631547 123 - 3785965 TTTGACTTTTGTCTTTGCTTAAGG-AG-TTTTGCCATATATAATTTTCTTTTTATTACATGAGGTAATTAATATTTT--------------------TCATAA--TATTCCCCGTCCCCCATGCTTTCTTCTAGTAC-----------TATTTACATT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90253136 123 - 90373283 tttgacttttGTCTTTGCTTAAGG-AG-TTTTGCCATATATAATTTTCTTTTTATTACATGAGGTAATTAATATTTT--------------------TCATAA--TATTCCCCGTCCCCCATGCTTTCTTCTAGTAC-----------TATTTACATT i chlSab2.chr2 C 0 I 199 s manLeu1.NW_012101652v1 10439 123 - 179258 TTTGACTTTTGTCTTTGCTTAAGG-AG-TTTTGCCATATATAATTTTCTTTTTATTACATGAGGTAATTAATAATTT--------------------TCATAA--TATTCCCCATCCCCCATGCTTTCTTCTAGTAC-----------TATTTACATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5504380 123 - 5823884 TTTGACTTTTGTCTTTGCTTAAGG-AGTTTTTGCCATATATAATTTTCTTTTTATTACATGAGGTAATTAATATTTT--------------------TCATAA--TA-TCCCCATCTCCCATGCTCTCTTCTAGTAC-----------TATTTACATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58156355 152 + 159171411 GTTGACTTTTGTCTTTGCTTAAGGTAG-TTTTGCCATATCGACTTTTCTTTTTATTACATGATGTAATTAATCTTTTATAATTTGGGCTTTGAGAGCTCATAA--CATTCCCCCTCCCCCATGCTTT-TTTTAGGACTTTCAAGGG--TAATTACATA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16221510 152 + 16356641 TTTGACTTTTGTCTTTGCTTAAGGTAG-TTTTGTCATATCGAATTTTCTTTTTATTACATGATGTAATTAATCTTTTATAATTTGGGCTTTGAGAGCTCATAA--CGTT-CCTCTCCCCCATGCTTTCTTCTAGGACTTCCATGGT--TAATTACAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087082 152 + 1231380 CTTGACTTTTGTCTTTGCTTGAGGTAG-TTTTGCCATATCAAATTTTCTTTTTGTTACATGATGTAATTAATCTTTTATAATTTGGGCTTTGAGAGCTCATAA--CATT-CCCCTCCCCCATGCTTTCTTCTAGGACTTCCATGGT--TAATTACAGA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22784002 71 + 22939663 TTTGACTTTTGCTT-----------GG-TT-------------TTTCTGGCTTGTTACTTGTCATGATT-----TTT--------------------TTCTAG--TA--------CACCCATGGTTATTTT--------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47556853 137 + 47698779 tttgactttcatctttgcttaaggcag-tttggccctgcaga-----------agtacgtgaagtgattaattttgtatgaTTTGGGCTTTGTGAGCTCACAA--TATTC-----TTCCTGTGCTGTGTTCTAGTACCTCCAGGGTTGTATTTAAA-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 191857 121 - 397369 TTTTATTTCTGCCGTCGTTTAAGGTAA-CTTTGCCATGTAG-----TCTTTTTACTATGTTAGGCAATTCATCTTTC--------------------CTTTGACGTGTTGGGCGTCCCCTGTGCCTTCTTCTACTGC-----------CTTTGTGATT i dasNov3.JH569290 I 505 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=3265805.000000 s hg38.chr20_KI270870v1_alt 45933 398 + 183433 AAAAACTTTTAAATCTTTTTAAATCTATCCAGGCTTTATTTTGGTATAAG---AGCCAAGGTCG-----TGATTGATTGgtgtcagttagcatccatggaggagacagatgtcaccctcaacttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcatgtagagaaaccactaaggCTAATGCTGGGTGGGACCCCTCAGGCCTCGGAGGACACAGGGAGGCTGCAAGGGAGGT---------GGTCCTGCAGGAGCA----------------GAGACCTGGGTGTGGGGAGACTCGAGTGCAGGACCCTACAGGGAGGGCTGGGGAAGCAAACACCCACTC-----CCAGTTGGCTCCCTGCAGGCCA-----------------------------------------GTCCCACCCAGCAGCCCGGAGTCAGGCAG-CCGCAGGTGGCCCTGCAGGTCAC s panTro5.chr20 66370966 439 + 66533130 AAAAACTTTTAAATCTTTTTAAATCTATCCAGGCTTTATTTTGGTATAAG---AGCCAAGGTCG-----TGATTGATTGgtgtcagttagcatccatggaggagacagatgtcaccctcaacttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcatgtagagaaaccactaaggCTAATGCTGGGTGGGACCCCTCAGGCCTCGGAGGACACAGGGAGGCTGCAAGGGAGGT---------GGTCCTGCAGGAGCA----------------GAGACCTGGGTGTGGGGAGACTCGAGTGCAGGACCCTACAGGGAGGGCTGGGGAAACAAACACCCACTC-----CCAGTTGGCTCCCTGCAGGCCAATCGCACCCAGCAGCCCGGAGTCAGGGCTCCCTCCAGGCCAGTCCCACCCAGCAGCCCGGAGTCAGGCAG-CCGCAGGTGGCCCTGCAGGTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62051717 439 + 62195757 AAAAACTTTTACATCTTTTTAAATCTATCCAGGCTTTATTTTGGTATAAG---AGCCAAGGTCG-----TGATTGATTGgtgtcagttagcatccatggaggagacagatgtcaccctcaacttgggaaatttgaggagagatgaataaa-aggactaaggtgtggttggcatgtagagaaaccactaaggCTAATGCTGGGTGGGACCCCTCAGGCCTCGGAGGACACAGGGAGGCTGCAAGGGAGGT---------GGTCCTGCAGGAGCA----------------GAGACCTGGGTGTGGGGAGACTCGAGTGCAGGACCCTACAGGGAGGGCTGGGGAAACAAACACCCACTC-----CCAGTTGGCTCCCTGCAGGCCAACCGCACCCAGCAGCCCGGAGTCAGGGCTCCCTCCAGGCCAGTCCCACCCAGCAGCCCGGAGTCAGGCAG-CCGCAGGTGGCCCTGCAGGTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437078 438 - 578057 AAAAACTTTTAAATCTTTTAAAATCTATCCAGGCTTTATTTTGGTATAAG---AGCCAATGTCG-----TGATTGATTGgtgtcagttagcatccatggaggagacagatgtcaccctcaacttgggaaatttgaggagagatgaataaa--ggactaagatgtggttggcatgtagagaaaccactaaggCTAATGCTGGGTGGGACCCCTCAGGCCTCGGAGGACACAGGGAGGCTGCAAGGGAGGT---------GGTCCTGCAGGGGCA----------------GAGACCTGGGTGTGGGGAGACTCGAGTGCAGGACCCTACAGGGAGGGCTGGGGAAGAAAACACCCACTC-----CCAGTTGGCTCCCTGCAGGCCAATTGCACCCAGCAGCCCGGAGTCAGGGCTCCCTCCAGGCCAGTCCCACCCAGCAGCCCAGAGTCAGACAG-CCGCAGGTGGCCCTGCAGGTAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109963603 435 - 110113093 AAAAACTTTTAAATCTTTTTATATCTATCCAGGCTTTATTTTGGTATAAG---AGCCAAGCTTG---------TGATTGgtgtcagttagcatccatggaggagacagatgtcaccctcaacttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcatgtagagaagccactaaggCTAATGCTGGGTGGCACCCCTCAGGCCTCAGAGGACACAGGGAGGCTGCAAGGGAGGT---------GGTCCTGCAGGAGCA----------------GAGACCTGGGTGTGGGGAGACTCGAGTGCAGGGCCCTACAGGGAGGGTTGGGGAAACAAACACCCACTC-----CCAGTTGGCTCCCTGCAGGCCAATCGCACCCAGCAGCCCAGAGTCAGGGCTCCCTCCAGGCCAGTCCCACCCAGCAGCCCGGAGTCAGGCAG-CCACAGGTGGCCCTACAGGTCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92691444 393 - 92844088 AAAAACTTTTAAATCCTTGTAAATCCATCTAGGCTTTATTTTGGTGTAAG---AGCCAAGGTTG---------GAATTGgtgtctgttagcgtccatggaggagacagatgtcaccctcggcttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcatgtagagaaaccactaaggCTAATGCTGGGTGGGACCCCTCAGGCCTTGGAGGAGACAGGGAGGCTGCAAGGGAGGT---------GGTCCTGTGGGAGCA----------------GAGACCTGGGTGTGGGGAGATCCGAGGGCAGGGCCTCACAGGGAGGGTTGGGGGAACAAACACCCACTC-----CCAGCTGGCTCCCTGCAGGCCA-----------------------------------------GTCCCACCCAGCAGCCCAGATTCTGGCAG-CCACAGGT-GCCCTACAGGTCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96358863 393 + 96509753 AAAAACTTTTAAATCCTTGTAAATCCATCTAGGCTTTATTTTGGTGTAAG---AGCCAAGGTTG---------GAATTGgtgtctgttagcgtccgtggaggagacagatgtcaccctcagcttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcatgtagagaaaccactaaggCTAATGCTGGGTGGGACCCCTCAGGCCTTGGAGGAGACAGGGAGGCTGCAAGGGGGGT---------GGTCCTATGGGAGCA----------------GAGACCTGGGTATGGGGAGATCCGAGGGCAGGGCCTCACAGGGAGGGTTGGGGGAACAAACACCCACTC-----CCAGCTGGCTCCCTGCAGGCCA-----------------------------------------GTCCCACCCAGCAGCCCAGATTCAGGCAG-CCACAGGT-GCCCTACAGGTCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16828593 393 - 16982598 AAAAACTTTTAAATCCTTGTAAATCCATCTAGGCTTTATTTTGGTGTAAG---AGCCAAGGTTG---------GAATTGgtgtctgttagcgtccatggaggagacagatgtcaccctcagcttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcatgtagagaaaccactaaggCTAATGCTGGGTGGGACCCCTCAGGCCTTGGAGGAGACAGGGAGGCTGCAAGGGAGGT---------GGTCCTGTGGGAGCA----------------GAGACCTGGGTGTGGGGAGATCCGAGGGCAGGGCCTTACAGGGAGGGTTGGGGGAACAAACACCCACTC-----CCAGCTGGCTCCCTGCAGGCCA-----------------------------------------GTCCCACCCAGCAGCCCAGATTCAGGCAG-CCACAGGT-GCCCTACAGGTCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3631670 393 - 3785965 AAAAACTTTTAAATCCCTGTAAATCCATCTAGGCTTTATTTTGGTGTAAG---AGCCAAGGTTG---------GAATTGgtgtctgttagcgtccatggaggagacagatgtcaccctcagcttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcaggtagagaaaccgctaaggCTAATGCTGGGTGGGACCCCTCAGGCCTTGGAGGAGGCAGAGAGGCTGCAAGGGAGGT---------GGTCCTGTGGGAGCA----------------GAGACCTGGGTGTGGGGAGATCCGAGGGCAGGGCCTTACAGGGAGGGTTGGGGGAACAAACACCCACTC-----CCAGCTGGCTCCCTGCAGGCCA-----------------------------------------GTCCCACCCAGCAGCCCAGATTCAGGCAG-CCACAGGT-GCCCTACAGGTGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90253458 392 - 90373283 AAAAACTTTTAAATCTTTGTAAATCCATCTAGGCTTTATTTTGGTGTAAG---AGCCAAGGTTG---------GAATTGgtgccagttagcgtccatggaggagacagatgtcaccctcggcttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcatgtagagaaaccactaaggCTAATGCTGGGTGGAA-CCCTCAGGCCTTGGAGGAGACAGGGAGGCTGCAAGGGAGGT---------GGTCCTGTGGCAGCA----------------GGGACCTGGGTGTGGGGAGATCCGAGGGCAGGGCCTTACAGGGAGGGTTGGGGGAACAAACACCCACTC-----CCAGCTGGCTCCCTGCAGGCCA-----------------------------------------GTCCCACCCAGCAGCCCAGAGTCAGGCAG-CCACAGGT-GCCCCACAGGTCGC i chlSab2.chr2 I 199 C 0 s manLeu1.NW_012101652v1 10562 393 - 179258 AAAAACTTTTAAATCCTTGTAAATCCATCTAGGCTTTATTTTGGTGTAAG---AGCCAAGGTTG---------GAATTGgtgtctgttagcgtccatggaggagacagatgtcaccctcagcttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcaggtagagaaaccactaaggCTAATGCTGGGTGGGACCCCTCAGGCCTTGGAGGAGGCAGAGAGGCTGCAAGGGAGGT---------GGTCCTGTGGGAGCA----------------GAGACCTGGGTGTGGGGAGATCCGAGGGCAGGGCCTTACAGGGAGGGTTGGGGGAACAAACACCCACTC-----CCAGCTGGCTCCCTGCAGGCAA-----------------------------------------GTCCCACCCAGCAGCCCAGATTCAGGCAG-CCACAGGT-GCCCTACAGGTCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5504503 393 - 5823884 AAAAACTTTTAAATCTTTGTAAATCCATCTAGGCTTTATTTTGGTGTAAG---AGCCAAGGTTG---------GAATTCgtgtcagttagtgtccatggaggagacagatgtcaccctcagcttgggaaatttgaggagagatgaataaa-gggactaagatgtggttggcatgtagagaaaccactaaggCTAATGCTGGGTGGGACCCCTCAGGCCGTGGAGGAGACAGGGAGGCTGCAAGGGAGGT---------GGTCCTGTGGGAGCA----------------GAGATCTGGGTGTGGGGAGATCGGAGGGCAGGGCCTCACAGGGAGGGTTGGGGGAACAAACACCCACTC-----CCAGCTGACTCCCTGCAGGCCA-----------------------------------------GTCCCACCCAGCAGCCTGGATTCAGGCAG-CCACAGGT-GCCCTACAGGTCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58156507 389 + 159171411 AAACAGTGTTAAATCTTTG---ACCTACCTAGGCTTTATTTTGGTGCGAG---AGCCAAGGTCG---------GGATTGGTGTCTG-TAGCACccaggtaggagacagatgccatcctcagactgggaaatctgaggagagatgaataga-gagactaagatgtggttggagtgtagagaaaccaTGCAGGTGAATGCTGGGTGGGACCCCTCAGGCCTCAGAGGACACAGGGAGGCTGTGAGGGAGGC---------GGTCCTACAGGAGCT----------------GAGACCTGGCTGTGGGGAGACCTGAGTGCAGGGCC-TGTAGGGAGGGCTGTGGGAACAAGCACCCACTC-----CCAGCTGGCTCCCTGCAGGCCA-----------------------------------------ACCCCACCCAGCAGCC-GGACTCTGACAGCCCGCAGGTGGCCCTACAGGTAAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16221662 388 + 16356641 AAACACTGTTAAATCTTTG---ACCTACCTAGGCTTTATTGTGGTGCAAG---AGCCAAGGTCG---------GGATTGGTGTCTG-TAGCATCCAGGTAGGAGAGAGATGTCACCCTCAGAC-GGGAGATCTGAGGGGAGATGAATAGA-GGGACTCAGCTGCGGTCGGAGCACAGAGAAACCACTCAGGTGAATGCCGGGTGTGACCCCTCAGGCCTCAGAGGACACAGGGAGGCTGTGAGGGAGGT---------GCTCCTGCAGGAGCT----------------GAGACCTGTGTGTGGGGAGACCTGAGTGCGGGGCC-TGCAGGGAGGGCTGTGGGAACAAACACCCACTC-----CCAGCTGGCTCCCTGCAGGCCA-----------------------------------------AACCCCCCTAGCAGCC-GGACTCAGACAGCCCACAGGTGGCCCTACAGGTCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087234 392 + 1231380 AAACACTGTTAAATCTTTG---ACCTACCTAGGCTTTATTGTGGTGCAAG---AGCCAAGGTCG---------GGGTTGgtgtctg-tagcatcccggtagcagagagatgtcaccctcagac-gggaaatctgaggggagatgaataga-ggaactcagctgtggtcagagcacagagaaaccaCGCAGGTGAATGCTGGGTGCGGCCCCTCAGGTCTCAGAGGACACAGGGAGGC---------------------GCTCCTGCAGGAGCTGAGACCTGGGTGTGGGGAGACCTGGGTGTGGGGAGACCTGAGTGCAGGGCC-TGCAGGGAGGGCTGTGGGAACAAACACCCACTC-----ccagccagctccccgccagcca-----------------------------------------acctcacccagcagcc-agactcagacagcccaCAGGTGGCCCTACAGGTCAC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22784073 383 + 22939663 TAAAACTTTAACATCTTTG---ATCCAGTTAGGATTTATTTTGGCATAAATCCAACTAATTTTATTTGGTATCGGATCCAtgtcagatagggtctaggtaggagacagacatcaccttcaacttgggaaatgtgaggagagttgaataaaggggattaaggtgccatgagggtatagagaaac---TCAGAACAATAGTGAGTAAG----TTCAGGCCTGAGAGGA--CAGGGGAGGGGATAGGAGGGC---------TGTCTGGTAGGAGCT----------------GAGACCTGTGGGTGAG--AACCCTGCCACAGGGCT---------------GGAGAGCAAATACCTACTCCACTGCCTGCAGGGCTCCTGTTGGCCT-----------------------------------------ATCTCTACCAGTAGCCAGGATGCAGGTGGCTCACAGGC-AACTTGCAGTCCAC i otoGar3.GL873542 C 0 I 22 s canFam3.chr24 47556990 258 + 47698779 -----CGTCTGCATCTTTG---GTCCATTTAGGATTTAATTTGGTGTGAG---ATCCAAGTTAG---------AGATCCGGGTCAGTGAGGGCCCAGGCAGGTGACACCTGTCGCGCTCCAGCTGGGCAAC---AGGAGAGCTGAGTGTG-GGGACT----------------------------------------CCGGGCGGGCCCTCT--------GTAGAGTAGAGTGGGGTAG--AGTGGGGTCCGTCCTCGGGCCCTATGGG-GCT----------------GAGGCCTGT------------------------------------GGCTGAGG---------------------CTCAATAGCCCGGTCCAGG--------------------------------------------GTCCTGC-----------GAGTCCTCTGG-CAGCAG----------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 191978 262 - 397369 ----------------------------------------------AAAG---ATCCAAGCTAG---------AAGTCTGTGTCGGTTAGGGTGCAGGTGGGAGAC-GATGG-GCCCTCAAAGTGGGC-ATTTGAGGAGAGCTGAATAAA-GGGAAAAGGG----------------------------GGAGAATGCTGTGTGGGTGCCCTCAGACCCGAGAGGCTTCAAGAAGGC----------GT-------------CGGCAGGAGCT----------------GAGGCC--------------CCTGGGTGAGGGGCCCTTC-GGGGGAGCTGGGGGAGAACACCCCCACCC-----CCGGC---CTCCCTCTGATCTA--------------------------------------------------------CCTGTGACAGGTAGGCCACAGGTGCACCT--------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1804891 1563 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=366287.000000 s hg38.chr20_KI270870v1_alt 46331 34 + 183433 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCTGGAC s panTro5.chr20 66371405 34 + 66533130 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCTGGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052156 34 + 62195757 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCTGGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437516 34 - 578057 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCTGGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964038 34 - 110113093 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCTGGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92691837 34 - 92844088 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCCGGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96359256 34 + 96509753 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCCGGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16828986 34 - 16982598 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCCGGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3632063 34 - 3785965 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCCGGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90253850 34 - 90373283 AGAG-GTGGAAAGGGGGGTGGGCCAGGTGCCGGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 10955 34 - 179258 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCCGGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5504896 34 - 5823884 AGAG-GTGGAAAGTGGGGTGGGCCAGATGCCGGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58156896 33 + 159171411 AGAA-GTGGAAAGT-GGGTGGGCCAGTTGCTGGAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222050 33 + 16356641 AGAA-GTGGAAAGT-GGGTGGGCTAGATGCTGGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087626 33 + 1231380 AGAA-GTGGAAAGT-GGGTGGGCCAGATGCTGGCC i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1806454 34 - 2029793 AGAA-GTGGGAAGTGGGGTGGGCCAGGTGCTGGAC i proCoq1.NW_012150197v1 I 1563 I 623 s otoGar3.GL873542 22784478 34 + 22939663 AGAG-GTGGAAAATGCTATAGGTCTGGTGTGGAAC i otoGar3.GL873542 I 22 C 0 s canFam3.chr24 47557248 21 + 47698779 CGAG-GGGGCGGGTGTGGCGGG------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 192240 31 - 397369 AGAGCGTGGAGAAGGGGAGGGG----GCGCTAGGC i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=774983.000000 s hg38.chr20_KI270870v1_alt 46365 108 + 183433 AGGTGCAG---CACAGGACGCTGGGATGAGCTTTGCCAGATG----TGGCTCCATTACTGAACCAAC-AACAACCGACTTGGGGGATGGGCACTTCCAGAAGCTCCCCAGGGCA-----------------------------------------------------------CC s panTro5.chr20 66371439 108 + 66533130 AGGTGCAG---CACAGGACGCTGGGATGAGCTCTGCCAGATG----TGGCTCCATTACTGAACCAAC-AACAACCGACTTGGGGGATGGGCACTTCCAGAAGCTCCCCAGGGCA-----------------------------------------------------------CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052190 108 + 62195757 AGGTGCAG---CGCAGGACGCTGGGATGAGCTCTGCCAGATG----TGGCTCCATTACTGAGACAAC-AACAACCGACTTGGGGGATGGGCACTTCCAGAAGCTCCCCAGGGCA-----------------------------------------------------------CC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437550 107 - 578057 AGGTGCAG---CACAGGACGCT-GGATGAGCTCTGCCAGATG----TGGCTCCATTACTGAACCAAC-AACAACCGACTTGGGGGATGGGCACTTCCAGGAGCTCCCCAGGGCA-----------------------------------------------------------CT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964072 108 - 110113093 AGGTGCAG---CACAGGACGCTGGGATGAGCTCTGCCAGATG----CGGCTCCATTACTGAACCAAC-AACAACCAACTTGGGGAATGGACACTTCCAGGAGCTCCCCAGGGCA-----------------------------------------------------------CT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92691871 108 - 92844088 AGGTGCAG---CACAGGACGCTGGGATGAGCTCTGCCAGATG----CAGCTCCATTACTGAACCAAC-AGCCACCGACTTGGGGAATGGGTACTTCCAGGAGCTCCCCAGGGCG-----------------------------------------------------------CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96359290 108 + 96509753 AGGTGCAG---CACAGGACGCTGGGATGAGCTCTGCCAGATG----CAGCTCCATTACTGAACCAAC-AGCCACCGACTTGGGGAATGGGTACTTCCAGGAGCTCCCCAGGGCG-----------------------------------------------------------CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16829020 108 - 16982598 AGGTGCAG---CACAGGACGCTGGGATGAGCTCTGCCAGATG----CAGCTCCATTACTGAACCAAC-ACCCACCGACTTGGGGAATGGGTACTTCCAGGAGCTCCCCAGGGCG-----------------------------------------------------------CT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3632097 108 - 3785965 AGGTGCAG---CACAGGACGCTGGGATGAGCTCTGCCGGATG----CAGCTCCATTTCTGAACCAAC-AGCCACCGACTTGAGGAATGGGCACTTCCAGGAGCTCCCCAGGGCG-----------------------------------------------------------CT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90253884 108 - 90373283 AGGTGCCA---CACAGGACGCTGGGATGAGCTCTGCCAGATG----CAGCTCCGTTACTGAACCAAC-AACCACCGACGTGGGGAATGGGCACTTCCAGGAGCTCCCCAGGGCA-----------------------------------------------------------CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 10989 167 - 179258 AGGTGCAG---CACAGGACGCTGGGATGAGCTCTGCCAGATG----CAGCTCCATTTCTGAACCAAC-AGCCACCGACTTGGGGAATGGGCACTTCCAGGAGCTCCCCAGGGCACTTGGACTCAGCCCCCGGGACGCCGTGTGCGGCTGGGTGTTCAGGAGCTCCCCAGGGCGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5504930 108 - 5823884 AGGTGCAG---CACAGGACGCTGGGATGAGCTCTGCCAGATG----CAGCTCCATTACTGAACCAAC-AACCACCGACTTGGAGAATGGGCACTTCCAGGAGCTCCCCAGGGCA-----------------------------------------------------------CT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58156929 107 + 159171411 AGG-GCAG---CACAGGATGGTGGGAAGAGCTCTGCCAGATG----CCACTCTGCTACTGAACCAACAAACCACTGACCTGGGGAATGGGCACTTCCAG-AGCTCCCCAGGGCA-----------------------------------------------------------CC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222083 95 + 16356641 AGG-GCAG---CACATGACGGTGGGA-----------AGATG----TGACTCTGCTACGGAACCAAC-AACCGCCGACCTGGGGAACGGGCACTTGCAG-AGCTCCCCAGGGCA-----------------------------------------------------------CC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087659 106 + 1231380 GGG-GCAG---AACAGGACGGTGGGAAGAGCTCTGCCAGATG----TGACTCTGCTACTAAACCAAC-AACCACTGACCTGGGGAACGGGCACTCCCAG-AGCTCCCCAGGGCA-----------------------------------------------------------CC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22784512 76 + 22939663 ----TCAGACCCACAGGGTGCTGGGC---ACTCTGCTCAGTG----TGA-GCAGTTACTGATCCAAC-A--CACCAGCCTGGAGAAGGGCT------------------------------------------------------------------------------------ i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47557269 97 + 47698779 ---TGCAG---CA---GGCGCTGGG------CCCGCGAGGAGGGACAGGCTGCA-TGCTGGGCTGTCCAGCACCTGACCTGGGGAGGGGCCGGTT---GAGGACCCCCAGGGCA-----------------------------------------------------------CA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 192271 51 - 397369 ---------------------------------------ATG----CGG--------CCAGGCATTC-ACACATGCAGGTGGGCAGTGGGCTCTTTCAGGACA------------------------------------------------------------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1806488 623 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56797823 2019 + 57149010 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=125447.000000 s hg38.chr20_KI270870v1_alt 46473 14 + 183433 TGGACTCAGCCCCC s panTro5.chr20 66371547 14 + 66533130 TGGACTCAGCCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052298 14 + 62195757 TGGACTCAGCCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437657 14 - 578057 TGGACTCAACCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964180 14 - 110113093 TGGACTCAGCCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92691979 14 - 92844088 TGGACTCAGCCCCC i rheMac8.chr10 C 0 I 60 s macFas5.chr10 96359398 13 + 96509753 TGGACTCAGCCCC- i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16829128 14 - 16982598 TGGACTCAGCCCCC i macNem1.NW_012014244v1 C 0 I 119 s cerAty1.NW_012001373v1 3632205 14 - 3785965 TGGACTCAGCCCCC i cerAty1.NW_012001373v1 C 0 I 59 s chlSab2.chr2 90253992 14 - 90373283 TGGACTCAGCCCCC i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 11156 14 - 179258 TGGACTCAGCCCCC i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5505038 14 - 5823884 TGGACTCAGCCCCC i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chr5 58157036 12 + 159171411 TGGG--CAGCCCCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222178 11 + 16356641 TGGG--CA-CCCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087765 12 + 1231380 TGCG--CAGCCTCC i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56799842 14 + 57149010 TGGACACAGCCCCC i micMur3.chr18 I 2019 C 0 s otoGar3.GL873542 22784588 14 + 22939663 TGGACACAGCCCCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47557366 14 + 47698779 TGGGCAGGGCCTCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 192322 6 - 397369 TGGACT-------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1806488 623 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=1050.000000 s hg38.chr20_KI270870v1_alt 46487 1 + 183433 A s panTro5.chr20 66371561 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052312 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437671 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964194 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s micMur3.chr18 56799856 1 + 57149010 A i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22784602 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47557380 1 + 47698779 A i canFam3.chr24 C 0 I 1 e proCoq1.NW_012150197v1 1806488 623 - 2029793 I e cerAty1.NW_012001373v1 3632219 59 - 3785965 I e colAng1.NW_012114444v1 5505052 1 - 5823884 I e chlSab2.chr2 90254006 1 - 90373283 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 192328 0 - 397369 C e manLeu1.NW_012101652v1 11170 1 - 179258 I e saiBol1.JH378156 16222189 0 + 16356641 C e macNem1.NW_012014244v1 16829142 119 - 16982598 I e cebCap1.NW_016107870v1 1087777 0 + 1231380 C e calJac3.chr5 58157048 0 + 159171411 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e rheMac8.chr10 92691993 60 - 92844088 I e macFas5.chr10 96359411 1 + 96509753 I a score=27342.000000 s hg38.chr20_KI270870v1_alt 46488 3 + 183433 GGG s panTro5.chr20 66371562 3 + 66533130 GGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052313 3 + 62195757 GGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437672 3 - 578057 CGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964195 3 - 110113093 GGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92692053 3 - 92844088 GGG i rheMac8.chr10 I 60 C 0 s macFas5.chr10 96359412 3 + 96509753 GGG i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16829261 3 - 16982598 GGG i macNem1.NW_012014244v1 I 119 C 0 s cerAty1.NW_012001373v1 3632278 3 - 3785965 GGG i cerAty1.NW_012001373v1 I 59 C 0 s chlSab2.chr2 90254007 3 - 90373283 GGG i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 11171 3 - 179258 GGG i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5505053 3 - 5823884 GGG i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chr5 58157048 3 + 159171411 AGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222189 3 + 16356641 GGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087777 3 + 1231380 GGG i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56799857 3 + 57149010 GGG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22784603 3 + 22939663 GTG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47557382 2 + 47698779 GG- i canFam3.chr24 I 1 I 6 e proCoq1.NW_012150197v1 1806488 623 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 192328 0 - 397369 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=101247.000000 s hg38.chr20_KI270870v1_alt 46491 11 + 183433 GTGCAGTGTGC s panTro5.chr20 66371565 11 + 66533130 GTGCAGTGTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052316 11 + 62195757 GTGCAGTGTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437675 11 - 578057 GTGCAGTGTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964198 11 - 110113093 GTGCAGTGTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92692056 11 - 92844088 ACGCCGTGTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96359415 11 + 96509753 ACGCCGTGTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16829264 11 - 16982598 ACGCCGTGTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3632281 11 - 3785965 ATGCCGTGTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90254010 11 - 90373283 ATGCAGTGTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 11174 11 - 179258 ATGCAGTGTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5505056 11 - 5823884 ATGCAGTGTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58157051 11 + 159171411 GCGCAGTGTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222192 11 + 16356641 GTGCAGTGTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087780 11 + 1231380 GCGCAGTGTGC i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56799860 11 + 57149010 GTGCAGGGTGG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22784606 11 + 22939663 GTGCAGGGTGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1806488 623 - 2029793 I e canFam3.chr24 47557384 6 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e dasNov3.JH569290 192328 0 - 397369 C e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=130182.000000 s hg38.chr20_KI270870v1_alt 46502 23 + 183433 GGTTGGGTGTTGGAGGCCTCAGG s panTro5.chr20 66371576 23 + 66533130 GGTTGGGTGCTGGAGGCCTCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052327 23 + 62195757 GGTTGGGTGTTGGAGGCCTCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437686 23 - 578057 GGTTGAGTGTTGGAGGCCTCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964209 23 - 110113093 GGTTGGGTGTTGGAGGGCTCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92692067 23 - 92844088 GGCTGGATGTTGGAGGGCTCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96359426 23 + 96509753 GGCTGGATGTTGGAGGGCTCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16829275 23 - 16982598 GGCTGGATGTTGGAGGGCTCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3632292 23 - 3785965 GGCTGGATGTTGGAGGGTTCAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90254021 23 - 90373283 GGCTGGATGTTGGAGGGCTCAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 11185 23 - 179258 GGCTGGATGTTGGAGGGCTCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5505067 23 - 5823884 GGTTGGATGTTGGAGGGCTCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58157062 22 + 159171411 GTG-GGGTGTTGGAGGGCTCAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222203 10 + 16356641 GTG-------TGGGGGG------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087791 7 + 1231380 GTG-------CAGG--------- i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56799871 23 + 57149010 GGTTGTGTGTTGGAGGGCTCAGG i micMur3.chr18 C 0 I 1763 s otoGar3.GL873542 22784617 18 + 22939663 GGTCAGGTATTGAAGGCC----- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47557390 20 + 47698779 GGGTGAGGGTTGGGAGGCTC--- i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 192328 13 - 397369 -----GGTGTGGGTAGGG----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1806488 623 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=1896375.000000 s hg38.chr20_KI270870v1_alt 46525 222 + 183433 TCTGGGC--CTAGTGGAGGCCAAAGGGTAGGGCCAGTGTGGAATGAGCTGACCACAAGCTGTTCTAGACAAGGCTGTAATCTGCCTTTGTGACCCCAGGGCTGTCCATGGGGAGCTCTGTGGACCTCTCAAT---GTCAGCGTTTTGGGGTAAGGGT-GGGGGTCAGGTGATGCTGG--------GATA-GATGGGGCAGGGTCTGTGGGGGTGGGGAGGGCCGGGGAGGCTGT---------------------------TGT s panTro5.chr20 66371599 221 + 66533130 TCTGGGC--CTGGTGGAGGCCAAAGGGTAGGGCCAGTGTGGAATGAGCTGACCACAAGCTGTTCTAGACAAGGCTGTAATCTGCCTTTGTGACCCCAGGGCTGTCCATGGGGAGCTCTATGGACCTCTCAAT---GTCAGCGTTTTGGGGTAAGGGT-GGGG-TCAGGTGATGCTGG--------GATA-GATGGGGCAGGGTCTGTGGGGGTGGGGAGGGCCGGGGAGGCTGT---------------------------TGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052350 222 + 62195757 TCTGGGC--CTGGTGGAGGCCAAAGGGTAGGGCCAGTGTGGAATGAGCTGACCACAAGCTGTTCTAGACAAGGCTGTAATCTGCCTTTGTGACCCCAGGGCTGTCCATGGGGAGCTCTATGGACCTCTCAAT---GTCAGCGTTTTGGGGTAAGGGT-GGGGGTCAGGTGATGCTGG--------GATA-GATGGGGCAGGGTCTGTGGGGGTGGGGAGGGCCGGGGACGCTGT---------------------------TGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437709 222 - 578057 TCTGGGC--CTGGTGGAGGCCAAAGGGTAGGGCCAGTGTGGAATGAGCTGACCACAAGCTGTTCTAGACAAGGCTGTAATCTGCCTTTGTGACCCCAGGGCTGTCCATGGGGAGCTCTATGGACCTCTCAAT---GTCAGCGTTTTGGGGTAAGGGT-GGGGGTCAGGTGATGCTGG--------GATA-GATGGGGCAGGGTCTGTGGGGGTGGGGAGGGCCGGGGAGGCTGT---------------------------TGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964232 221 - 110113093 TCTGGGC--CTTGTGGAGGCCAAAGGGTAGGGCCAGTGTGGAATGAGCTGACCACAAGCTGTTCTAGACAAGGCTGTGATCTGCCTTTGTGAACCCAGGGCTGTTCATGGGGAGCTCTATGGACCTCTCAAT---GTC-GTGTTTTGGGGTAAGGGT-GGGGGTCAGGTGATGCTGG--------GATA-GATGGGGCAGGGTCTGGGGGGGTGGGGAGGGCCGGGGAGGTTGT---------------------------TGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92692090 243 - 92844088 TCTGGGC--CTGGGGGAGGCCAAAGGGTAGTGCCAGTGTGGAATGAGCCGACCACAAGCTGCTCTGGACAAGGCTGTGATCTGCCTTTGTGACCCCAGGGCTGCCCATGGGGAGCT-TATGGACCTCTCAAT---GTCAGTGTTTTGgggtgagggt-gggggtcaggtgatgctgg--------gata-gatggggcagggtCTGCGGGGGTGGGAAGGGCCGGGGAGGCTGTTGGTGGGCACCGGGCCCCATG-----CTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96359449 243 + 96509753 TCTGGGC--CTGGGGGAGGCCAAAGGGTAGTGCCAGTGTGGAATGAGCCGACCACAAGCTGCTCTGGACAAGGCTGTGATCTGCCTTTGTGACCCCAGGGCTGCCCATGGGGAGCT-TATGGACCTCTCAAT---GTCAGTGTTTTGgggtgagggt-gggggtcaggtgatgctgg--------gata-gatggggcagggtCTGCGGGGGTGGGAAGGGCCGGGGAGGCTGTTGGTGGGCACCGGGCCCCATG-----CTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16829298 245 - 16982598 TCTGGGCCTCTGGGGGAGGCCAAAGGGTAGTGCCAGTGTGGAATGAGCCGACCACAAGCTGCTCTGGACAAGGCTGTGATCTGCCTTTGTGACCCCAGGGCTGCCCATGGGGAGCT-TATGGACCTCTCAAT---GTCAGTGTTTTGgggtgagggt-gggggtcaggtgatgctgg--------gata-gatggggcagggtCTGCGGGGGTGGGAAGGGCCGGGGAGGCTGTTGGTGGGCACCGGGCCCCATG-----CTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3632315 243 - 3785965 TCTGGGC--CTGGGGGAGGCCCAAGGGTAGTGCCAGTGTGGAATGAGCCGACCACAAGCTGCTCTGGACAAGGCTGTGATCTGCCTTTGTGACCCCAGGGCTGCCCATGGGGAGCT-TATGGACCTCTCAAT---GTCAGTGTTTTGgggtgagggt-gggggtcaggtgatgctgg--------gata-gatggggcagggtCTGCGGGGGTGGGAAGGGCCGGGGAGGCTGTTGGTGGGCACCGGGCCCCATG-----CTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90254044 241 - 90373283 TCTGGGC--CTGGGGGAGGCCAAAGGGTAGTGCCAGTGTGGAAGGAGCCGACCACAAGCTGCTCTGGACGAGGCTGTGATCTGCCTTTGTGACCCCAGGGCCGCCCATGGGGAGCT-TATGGACCTCTCAAT---GTCGGTGTTTtggggtgagggt--ggggtcaggtgctgctgg--------gata-gatggggcagggtctgc-ggggtgggaagggccggggaggCTGTTGGTGTGCACCGGGCCCCATG-----CTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 11208 243 - 179258 TCTGGGC--CTGGGGGAGGCCAAAGGGTAGTGCCAGTGTGGCATGAGCCGACCACAAGCTGCTCTGGACAAGGCTGTGATCTGCCTTTGTGACCCCAGGGCTGCCCATGGGGAGCT-TATGGACCTCTCAAT---GTCAGTGTTTTGgggtgagggt-gggggtcaggtgatgctgg--------gata-gatggggcagggtCTGCGGGGGTGGGAAGGGCCGGGGAGGCTGTTGGTGGGCACCGGGCCCCATG-----CTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5505090 244 - 5823884 TCTGGGC--CTAGGGGAGGCCAAAGGGTAGTGCCAGTGTGGAATGAGCTGACCACAAGCTGCTCTGGACGAGGCTGTGATCTGCCTTTGTGACCCCAGGGCTGCCCATGGGGAGCTCTATGGACCTCTCAAT---GTCAGTGTTTTGgggtgagggt-gggggtcaggtgatgctag--------gata-gatggggcagggtCTGCGGGGGTGGGAAGGGCCGGGGAGGCTGTTGGTGTGCACCGGGCCCCATG-----CTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58157084 249 + 159171411 TCTGGGC--CTGGTGGAGGCCTCAGAGCAGGGCCAGTGTGGAGTGAGCTGACCACAAGCTGGTCTGGAC-AGGCTGTGATCTGCCTTTGTGA-CCTAGGGCTGTCCATGAGGAGCTCTGCAGACCTCTCAAT---GTCAGTGTTTGGGGGTGAGGGTGGGGGGTCAGGTGATGCTGGGATGCTGGGATA-GATGGGGCATGGTCTGT-GGGGTGGGGAGGGCCGGGGAGGCTGTTAGTGTGCA-TGGGCACTATG-----CTGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222213 241 + 16356641 ----------TGTTGGAGGCCTCAGAGCAGGGCCAGTGTGGAGTGAGCCGACAACAAGCTGGTCTGGAC-AGGCTGTGATCTGCCTTTGTGA-CCTAGGGCTGTCCATGAGAAGCCCTACAGACCTCTCGAT---GTCAGTGTTTGGGGGTGAGGGTCGGGGGTCAGGTGATGCTGGGATACTGAGATA-GATGGGGCATGGTCTGC-AGGGTGGGGAGGGCCGGGGAGGCTGTTGGTGTGCA-TGGGCACTGTG-----CTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1087798 241 + 1231380 ----------TGTTGGAGGCCTCAGAGCAGGGCCAGTGTGGAGTGAGCCGACCACAAGCTGGTCTGGAC-AGGCTGTGATCTGCCTTTGTGA-CCTAGGGCTGTCCATGAGGAGCTCTACGGACCTCTCGAT---GTCAGTGTTTGGGGGTGAGGGTGGGGGATCAGGTGATGCTGGGATGCTGAGATA-GATGGGGCACGGTCTGC-AGGGTGGGGAGGGCTGGGGAGGCTGTTGGTGTGCA-TGGGCACTGTG-----CTGC i cebCap1.NW_016107870v1 C 0 I 4 s otoGar3.GL873542 22784635 199 + 22939663 ----------------------AAGGGAAAGGCTAGTGTGGGATGAGCTGACCACAACCTGGTCTGGACAGTTC---------------------------------TGGAGAACTCTATGGACCTCTTGATTCAATTTGTGTTTTGGACTGGGGGT-GGAGGGCCAGTGAAGCTGGGATGCTGGGGAA-GATAGGGCTGGATCTGTGGGGTTGTGAA-------GAAGGCTGTTGGTGTACA-TGGGCACCGTGACATACCTT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47557410 152 + 47698779 -------------TGGGGGTCACGGGGAAGGGTCTGTGTGGGGTGA-TTGGACACATGCTGGTCT------------------CCCTTTCCAGCCCGTGGCGGTCCCTGGG------------------------GCC-----------------GT-GGGA---CGGTGATTCCGG--------GCTGTGCTCGAGCCGGGTCTGTGGAGGGGGACAGTGTGAGGGAGGCCGC-GGT-------------------------- i canFam3.chr24 C 0 I 397 s dasNov3.JH569290 192341 185 - 397369 TCTGGTT---CAGGGGAGGCTGAGGGCGAGGGCTTGTGCGG------CCCCCCA------------------GCAGTCGCCTGCCTTTCTGACTCCAGGGCTGCCCCCAGTGAGCTCTGGGCCTCTCCTGGA---TTTTGCCTTTTGGGG-AGGGGT-GGGAG--GGGTGGGTGTGT--------GTTG-GACG---------CTGTGCGGGAGGGGAAGGCGAGGGAGGTCATCGG--------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1806488 623 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=31279.000000 s hg38.chr20_KI270870v1_alt 46747 3 + 183433 Cat s panTro5.chr20 66371820 3 + 66533130 Cat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052572 3 + 62195757 Cat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437931 3 - 578057 CAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964453 3 - 110113093 CAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92692333 3 - 92844088 CAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96359692 3 + 96509753 CAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16829543 3 - 16982598 CAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3632558 3 - 3785965 CAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90254285 3 - 90373283 CAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 11451 3 - 179258 CAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5505334 3 - 5823884 CAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58157333 3 + 159171411 CAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222454 3 + 16356641 cat i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1088043 3 + 1231380 cat i cebCap1.NW_016107870v1 I 4 C 0 s otoGar3.GL873542 22784834 3 + 22939663 CCC i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 192526 3 - 397369 CGT i dasNov3.JH569290 C 0 I 16 e proCoq1.NW_012150197v1 1806488 623 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=2545638.000000 s hg38.chr20_KI270870v1_alt 46750 307 + 183433 tca-------ttcatcc------------agtgcacacgggtgaagccctgctctagccacgccctggaacaaggccatgaggaatcagacactagcggttacttttaacgagcacctactgtatgcaggttccttgtgttgaccttcaggagctcatttactactcacaacaaccctgccgtctaagtgaggagactgagtttcag-aaaggttaagtaacctgcccgtggtcacaccgagctgggattcgaacgcgggactggctgactccaggcctcaagctgtgttctgctaagctgtgctgctgcctctgggaagtctcaca s panTro5.chr20 66371823 307 + 66533130 tca-------ttcatcc------------agtgcacacgggtgaagccctgctctagccacgccctggaacaaggccatgaggaatcagacactagcggttacttttaacaagcacctactgtatgcaggttccttgtgttgaccttcacgagctcatttactactcacaacaaccctgccgtctaagtgaggagaccgagtttcag-aaaggttaagtaacctgcctgtggtcacaccgagctgggattcgaacgcgggactggctgactccaggcctcaagctgtgttctgctaagctgtgctgctgcctctgggaagtctcaca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052575 307 + 62195757 tca-------ttcatcc------------agtgcacacgggtgaagccctgctctagccacgccctggaacaaggccatgaggaatcagacactagcggttacttttaacgagcacctactgtatgcaggttccttgtgttgaccttcacgagctcatttactactcacaacaaccctgctgtctaagtgaggagactgagtttcag-aaaggttaagtaacctgcccatggtcacaccgagctgggattcgaacgcgggactggctgactccaggcctcaagctgtgttctgctaagctgtgctgctgcctctgggaagtctcaca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 437934 306 - 578057 TCA-------TTCATCC------------AGTGCACACGGGTGACGCCCTGCTGTAGCCACGCCCTGGAACAAGGCCATGAGGAATCAGACACTAGCGGTTacttttaacgagcacctactgtatgcaggttccttgtgttgaccttcacgagctcatttactactcacaacaaccctgccctctaagtgaggag-ctgagtttcag-aaaggttaagtaacctgcccatggtcacaccgagctgggattcgaacgcgggactggctgactccaggcctcaagctgtgttctgctaagctgtgctgCTGCCTCTGGGAAGTCTCACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964456 307 - 110113093 TCA-------TTCATCC------------AGTGCGCGCGGGTGAAGCCCTGCTCTAGCCATGCCCTGGAACAAGGCCATGAGGAATCAGACACTAGCAGTTacttttaaggagcacctactgtatgcaggttccttctgttgaccttcacgagctcatttaatgctcacaacaaccctgccctctaagtgaggagactgggtttcag-aaaggttaagtaacctgcccatggtcacaccgagctgggattcgaacacgggactggctgactccaggcctcaagctccgttctgctaagctgtgctgCTGCCTCTGGGAAGTCTCACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92692336 306 - 92844088 TCA-------TGTATCC------------AGTGCACGTGGGTGAAGCCCTGCTCTAGCCACACCCTGGAACAAGGCTGTGAGGAATCAGTCACTCGTGGTTGCTtttaacgagcacttac-gtgtgcaggttccttgtgttgaccttcacaggctcacttaatgctcacaacaaccctgccctctaaatgaggagactgggtttcag-aaaggttaaggaacctgcccatggtcacaccaagctgggattcgaacacgggactggctgactccaggcctcaggctccttcctgctgagctgtgctgCTGCCTCTGGGGAGTCTCACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96359695 306 + 96509753 TCA-------TGTATCC------------AGTGCACGTGGGTGAAGCCCTGCTCTAGCCACACCCTGGAACAAGGCTGTGAGGAATCAGTCACTCGTGGTTGCTtttaacgagcacttac-gtgtgcaggttccttgtgttgaccttcacaggctcacttaatgctcacaacaaccctgccctctaaatgaggagactgggtttcag-aaaggttaaggaacctgcccatggtcacaccaagctgggattcgaacacgggactggccgactccaggcctcaggctccttcctgctgagctgtgctgCTGCCTCTGGGGAGTCTCACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16829546 306 - 16982598 TCA-------TGTATCC------------AGTGCACGTGGGTGAAGCCCTGCTCTAGCCACACCCTGGAACAAGGCTGTGAGGAATCAGTCACTCGTGGTTGCTtttaacgagcacttac-gtgtgcaggttccttgtgttgaccttcacaggctcacttaatgctcacaacaaccctgccctctaaatgaggagactgggtttcag-aaaggttaaggaacctgcccatggtcacaccaagctgggattcgaacacgggactggccgactccaggcctcaggctccttcctgctgagctgtgctgCTGCCTCTGGGGAGTCTCACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3632561 306 - 3785965 TCA-------TGTATCC------------AGTGCACATGGGTGAAGCCCTGCTCTAGCCACACCCTGGAACAAGGCTGTGAGGAATCAGTCACTCGTGGTTGCTtttaacgagcacttac-gtgtgcaggttccttgtgttgaccttcacaggctcacttaatgctcacaacaaccctgccctctaaatgaggagactgggtttcag-aaaggttaaggaacctgcccatggtcacaccaagctgggattcgaacacgggactggccgactccaggcctcaggctccttcctgctgagctgtgctgCTGCCTCTGGGGAGTCTCACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90254288 306 - 90373283 TCA-------TGTATCC------------AGAGCACGTGGGTGAAGCCCTGCTCTAGCCACACCCTGGAACAAGGCTGTGAGGAATCAGTCACTCATGGTTGCTtttaacgagcacttac-gtgtgcaggttccttgtgttgaccttcacaagctcacttaatgctcacaacaaccctgccctctaaatgaggagactgggtttcag-aaaggttaagtaacctgcccatggtcacaccaagctgggattcgaacatgggactggctgactccaggcctcaggctccttcctgctgagctgtgctgCTGCCTCTGGGGAGTCTCACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 11454 305 - 179258 TCA-------TGTATCC------------AGTGCACGTGGGTGAAGCCCTGCTCTAGCCACACCCTGGAACAAGGCTGTGAGGAATCAGTCACTCGTGGTTGCTtttaacgagcacttac-gtgtgcaggttccttgtgttgaccttcacaggctcacttaatgctcacaacaaccctgccctctaagtgaggagactgggtttca--aaaggttaaggaacctgcccatggtcacaccaagctgggattcgaacacgggactagccgactccaggcctcagactccttcctgctgagctgtgctgCTGCCTCTGGGGAGTCTCACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5505337 306 - 5823884 TCA-------TTTATCC------------AGTGCACGTGGGTGAAGCCCTGCTCTAGTCACACCCTGGAACAAGGCTATGAGGAATCAGTCACTCGTGGTTGCTtttaacgagcactta--gtgtgcaggttccttgtgttgaccttcacaggctcatttaatgctcacaacaaccctgccctctaaatgaggagactgggtttcagaaaaggtcaagtaacccgcccatggtcacaccaagctgggactcgaacatgggactggccgactccaggcctcaagctccttcctgctgagctgtgctgCTGCCTCTGGGGAGTCTCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58157336 301 + 159171411 TCA-------TTC----------------GGTGCACTCGGGTGAAGCCCTGCTCTTGCCACATCCTGGAACACGGCCACGAGGATTCACACACGAGTGGTTATTCttaacgagcacctactgtgtgcaggtcccttgtgtgtaccttcaggagctcatttaatgctcacagcaaccctgccctctagatttggagactgggtttcag-aaaggct--gtctcctgcccacagccgcaccgagttgggatttgaacatggaactagctgactctaggcctcaggatcctttctgttaagtggtgctgctgcctctgGGAAGTCTCATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222457 318 + 16356641 tca-------ttcattcattcattcattTGGTGCACTCGGGTGAAACCCTGCTCTTGCCACATCCTGGAACAAGGCCACGAGGATTCAGACACAAGTGGTTATTCttaacaagcacctactgtgtgcaggtccc-tgtgtttaccttcaagagctcatttaatgctcacaacaaccctgccctctagattaggagactgggtttcag-aaaggttaggtcatctgcccacagctgcactgagctggggttcgaacatggggctggctgtctctaggcctcaggatcctttctgctaagtggtgctgctccctctgGGAAGTCTCATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1088046 319 + 1231380 tca-------ttcattcattcattcattcGGTGCACTTGGGTGAAGCCCTGCTCTTGCCACATCCTGGAACAAGGCCACGAGGATTCAGACACGAGTGGTTATTCttaacgagcacctactgtgtgcaggtcccttgtgtttaccttcaggagctgatttaatgctcacaacaaccctgccctctagattaggagactggatttcag-aaaggttaagtcagatgcccacagctgcaccgagctgggattcgaacgtgggactggctgactctaggcctcagaatcctttctgctaagtggtgctgctccctctgGGAAGTCTCATG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22784837 230 + 22939663 TCACCCCCTCTTCATTC------------AGCAGCTACTGGGGAGACCCTGTTCTAGCCAGGTGCTGGGCCAAGGCTA-------------------------------------------GTGTG------------------TTTCGTGAGCTCATTTAAAGCTTACAACAGCCCCACCCTCTCAGT--GGGGCTCAGGGCTTAG-AGAGGTTATGTA----------------ACAGAACTGGGAGCTGACCCTG--ACTGGCTGACTTGAGGGCTGAGGTT---TCCTGCTACTCTGGGCTGCTGCCTCCAGAAAGGCTGGTG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1806488 623 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=579104.000000 s hg38.chr20_KI270870v1_alt 47057 55 + 183433 gAGATGAAGGCCAGCCTGTCTCCACTTTTGGGGAATTCACCCTCCATTGGGTGGG s panTro5.chr20 66372130 54 + 66533130 gAGATGAAGGCC-GCCTGTCTCCACTTTTGGGGAATTCACCCTCCATTGGGTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052882 55 + 62195757 gAGATGAAGGCCAGCCTGTCTCCACTTTTGGGGAATTCACCCTCCATTGGGTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438240 55 - 578057 GAGATGAAGGCCAGCCTGTCTCCACTTCTGGGGAATTCACCCTCCATTGGGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964763 55 - 110113093 GAGATGAAGGCCAGCCTGTTTCCACTTTTGGGGAATTCACCCTCCATTGGGTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92692642 55 - 92844088 GAGATGAGGGCCAGCCTGTCTCCACTTTCGGGGAATTCACCCTCCACTGGGTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360001 55 + 96509753 GAGATGAGGGCCAGCCTGTCTCCACTTTCGGGGAATTCACCCTCCACTGGGTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16829852 55 - 16982598 GAGATGAGGGCCAGCCTGTCTCCACTTTCGGGGAATTCACCCTCCACTGGGTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3632867 55 - 3785965 GAGATGAGGGCCAGCCTGTCTCCACTTTCGGGGAATTCACCCTCCACTGGGTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90254594 55 - 90373283 GAGATGAGGGCCAGCCTGTCTCCACTTTCGGGGAATTCACCCTCCACTGGGTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 11759 55 - 179258 GAGATGGGGGCCAGCCTGTCTCCGCTTTCGGGGAATTCACCCTCCACTGGGTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5505643 55 - 5823884 GAGACCAGGGCCAGCCTGTCTCCACTTCTGGGGAACTCACCCTCCGCTGAGTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58157637 55 + 159171411 GAGTTGAAGACCAGCCTGTCTCCACTTTTGGGAAATTCACCCTCCACTGGGTGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222775 55 + 16356641 GAGATGAAGATGAGCCTGTCTCCAGTTTTGGGGAATTCACCCTCCACTGGGTAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1088365 55 + 1231380 GAGAGGAAGACCAGCCTGTCTCCACTTTTGGGGAATTCACCCTCCACTGGGTAGG i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1807111 55 - 2029793 GAGGTGAAGGCCAGGCTGTCTCTTCTTTTGGGGAATTGACTCTCCACTGGGTGGG i proCoq1.NW_012150197v1 I 623 I 555 s otoGar3.GL873542 22785067 52 + 22939663 -GAGAGAAGCTCAGGATGTCTCTGCTTT--GGGAATTTATCCTGCACTGGGTGGG i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=1071667.000000 s hg38.chr20_KI270870v1_alt 47112 142 + 183433 CAGAGGCCTCATTATCAAATAAGGACAGCGGAGAGATTCGTGCTGAGCCACATGCGCTGTCCTGCACTCACCCATTCTTGCGGCACGGGAACTGAGCACGTATGTTGAGCTCCTGCCAAAAAGTTATGATGCttcttt----tttt s panTro5.chr20 66372184 142 + 66533130 CAGAGGCCTCATTATCTCATAAGGACAGCGGAGAGATTCGTGCTGAGCCACATGCGCCGTCCTGCACTCACCAATTCTTGCAGCATGGGAACTGAGCACGTATGTTGAGCTCCTGCCAAAAAGTTATGATGCttcttt----tttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62052937 142 + 62195757 CAGAGGCCTCATTATCTCATAAGGACAGCGGAGAGATTCGTGCTGAGCCACATGCGCCGTCCTGCACTCACCAATTCTTGCGGCATGGGAACTGAGCATGTATGTTGAGCTCCTGCCAAAAACTTATGATGCttcttt----tttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438295 142 - 578057 CAGAGGCCTCATTATCTCATAAGGACAGCGGAGAGATTCGTGCTGAGCCACACGCACCGTCCTGTGTTCACCCATTCTTGCGGCACGGGAACTGAGCACATATGTTGAGCTCCTGCCAAAAAGTTATGATGCtttttt----tttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964818 141 - 110113093 CAGAGGCCTCATTATCTCATAAGGACAGCGGAGAGATTCGTGCTGAGCCACATGCGCTGTCCTGCACTCACCTATTCTTGCGGCCCAGGAACTGAGCACATATGTTGAGCTCCTGCCAAAAAGTTATCATGCtttttt----ttt- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92692697 146 - 92844088 CAGAGGCCTCGTGATCTCATAAGGACAGCAGGGCGATTCGTGCTGAGCCACGTGCGCCGTCCTGCACTCGCCTGTTCTTGTGGCCCAGGAACTGAGCAGCTATGTTGAGCCCCTGACAAAAACTTATGATGCttttcctttttttt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360056 146 + 96509753 CAGAGGCCTCGTGATCTCATAAGGACAGCAGGGCGATTCGTGCTGAGCCACGTGCGCCGTCCTGCACTCGCCTGTTCTTGTGGCCCAGGAACTGAGCAGCTATGTTGAGCCCCTGACAAAAACTTATGATGCttttcctttttttt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16829907 142 - 16982598 CAGAGGCCTCGTGATCTCATAAGGACAGCAGGGCGATTCGTGCTGAGCCACGTGCGCCGTCCTGCACTCGCCTGTTCTTGTGGCCCAGGAACTGAGCAGCTATGTTGAGCCCCTGACAAAAACTTATGATGCttttcc----tttt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3632922 140 - 3785965 CAGAGGCCTCGTGATCTCATAAGGACAGCAGGGAGATTCGTGCTGAGCCACGTGCGCCGTCCTGCACCCGCCTGTTCTTGTGGCCCAGGAACTGAGCAGCTATGTTGAGCCCCTGACAAAAACTGATGATGCttttcc------tt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90254649 146 - 90373283 CAGAGGCCTCGTGATCTCATAAGGACAGCAGGGAGATTCGTGCTGAGCCACGTGCGCCGTCCTGCACTTGCCTGTTCTCGTGGCCCAGGAACTGAGCAGCTATGTTGAGCCCCTGACAAAAACTTATGATGCttttcctttttttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 11814 140 - 179258 CAGAGGCCTCGTGATCTCATAAGGACAGCAGGGAAATTCGTGCTGAGCCATGTGCGCCGTCCTGCACTCGCCTGTTCTTGTGGCCCAGGAACTGAGCAGCTATGTTGAGCCTCTGACAAAAACTTATGATGCttttcc------tt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5505698 141 - 5823884 CAGAGGCCTCGTGATCTCCTAAGGACAGCAGAGAGATTCATGCTGGGCCACGTGCGCCGTCATGCACTCGCCTGTTCTTGTGGCCCAGGAACTGAGCAGCTGTGTTGAGCCCCTGACAAAAAGTTATGATGCttttcc-----ttt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58157692 142 + 159171411 CAGAGGCCTCATCATCTCATAAGGACAGCAGAGAGATTTGTGCTGAGCCAGATGCGCCGCCCTGCGTTCAGCTATTCACGTGGTGCAGAAACTGAGCACATATGTTCAGCCCCTGTCAAAAAGTGATGCTGCTTCTTG----ACAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16222830 141 + 16356641 CAGA-GCCTCATCATCTCATAAGGACAGCAGAGAGATTTGTGCTGAGCCAGATGGGCTGCCCTGCATTCAGCTATCCACGCGGTGCAGGAACTGAGCACATATGTTCAGCCCCTGCCAAAAAGTGATGATGCTTCTTG----ACAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1088420 142 + 1231380 CAGAGGCCTCATCATCTCATAAGGACAGCAGAGAGATTTATGCTCAGCCAGATGCGCTGCCCTGCATTCAGCTATTCACGTGGCGCAAGAACTGAGCACATATATTCAGCCCCTGCCAAAAAGTGATGATGCTTCTTG----ACAT i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22785119 124 + 22939663 ---GGAATTCATTGACTCCCAAGGACAGTGGA-AGATTAGTCCTGAGCTGGAGGCA---TCATTCATTCATTCATTTATGCAGCACATG-----------TGTATTTGATGCTTTGCCAAAAGTTATGATGCTCCTTG----ACAT i otoGar3.GL873542 C 0 I 198 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=1418958.000000 s hg38.chr20_KI270870v1_alt 47254 196 + 183433 --ttt-ttt---tctttttgagacgcattcttgctctgttgcccaggctggagtgcagtggtgcagtctcggcttactgcaaactctgcctcccgggttcacgccattatcctgcctcagcctcccgagtagctgggactacaggcacctgccatcatgcctggctaatttttttttgtatttttaggagagac--agtgtttc s panTro5.chr20 66372326 195 + 66533130 --ttt-ttt----ctttttgagacgcattcttgctctgttgcccaggctggagtgcagtggtgcagtctcggcttactgcaaactctgcctcccgggttcacgccattatcctgcctcagcctcccgagtagctgggactacaggcacctgccatcacacctggctaatttttttttgtatttttaggagagac--agtgtttc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053079 192 + 62195757 --ttt--------ctttttgagacgcattcttgctctgttgcccaggctggagtgcagtggtgcagtcttggcttactgcaaactctgcctcccgggttcacgccattatcctgcctcagcctcccgagtagctgggactacaggcacctgccatcacgcctggctaatttttgtttgtatttttaggagagac--agtgtttc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438437 199 - 578057 --ttt-tttttttctttttgagacgcattctcgctctgttgcctaggctggagtgcagtggtgcagtctcggcttactgcaaactctgcctcccgggttcacgccattatcctgcctcagcctcccgagtagctgggactacgggcacctgccatcacgcctggctaatttttttttgtatttttaggagagac--agtgtttc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109964959 187 - 110113093 -------------ctttttgagacggattctcgctctgttgcccaggctggagtgcagtggtgcaatctcggcttactgcaaactctgcctcccgggttcacgccattatcctgcctcagcctcccgagtagctgggactacaggcgcccgccaacacgcccggctaatttt--tttgtatttttagtagaaac--ggggtttc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92692843 189 - 92844088 --ttt-ttt----ttttttgagatggagtctcgc--tgtcacccaggctggagtgcagtggcgtgatctcagctcactgcaagctccgcctcctgggttcacgccattctcctgcctctgcctcccgagtagctgggactacaggcg-ccgccaccacacctggctaattttt-tttgtatttttagtagagac--a--gtttc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360202 191 + 96509753 --ttt-ttt----ttttttgagatggagtctcgctatgtcacccaggctggagtgcagtggcgtgatctcagctcactgcaagctccgcctcctgggttcacgccattctcctgcctccgcctcccgagtagctgggactacaggcg-ccgccaccacacctggctaattttt-tttgtatttttagtagagac--a--gtttc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830049 191 - 16982598 --ttt-ttt----ctttttgagatggagtctcgctatgtcacccaggctggagtgcagtggcgtgatctcagctcactgcaagctccgcctcctgggttcacgccattctcctgcctccgcctcccgagtagctgggactacaggcg-ccgccaccacacctggctaattttt-tttgtatttttagtagagac--a--gtttc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633062 191 - 3785965 --ttt-ttt----ttttttgagatggagtctcgctatgtcacccaggctggagtgcagtggccggatctcagctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacacctggctaattttt-tttgtatttttagtagagac--a--gtttc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90254795 190 - 90373283 --ttt-ttt----tttttttttttggagtcttgctgtgtcgcccaggctggagtgcagtggcgtgatctcagctca-tgcaagctccgcctcccgggttcacatcattctcctgcctcagcctcccgagtagctgggactacaggcg-ccgccaccacgcccggctaattttt-tttgtatttttagtagagac--a--gtttc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 11954 191 - 179258 --ttt-ttt----ttttttgagatggagtctcgctatgtcacccaggctggagtgcagtggcgtgatctcagctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcg-ccgccaccacacctggctaattttt-tttgtatttttagtagagac--a--gtttc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5505839 194 - 5823884 --ttt-ttt----ttttttgagacagagtctcgctctgttgcccaggctggagtgcagtggccagatctcagctcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccacacccggctaattttt-tttgtatttttagtagagacgga--gtttc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58157834 192 + 159171411 -AAtt-ttt----ttttttgagacagagtctcactctgtcacccaggctggagagtagtggtgtgatcttggctcactacaacctccgcctcctgggttcaaacgattctcgtgcctcagcctcctaagtagctgggattacaggtgcccaccaccatacctggctaatt----tttgtatttttagtaaagac--caggtttC i calJac3.chr5 C 0 I 413 s saiBol1.JH378156 16222971 193 + 16356641 AAAtt-ttt----ttttttttgagagagtcttactctgtcacccaggctggagagtagtggtgcgatcttggctcactgcaacctccgcttcgtgggttcaaacgcttctcgtgcctcagcctcctgagtagctgggattacaggtgcccaccaccatacctggctagtt----tttgtatttttagtagagac--agggtttc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1088562 194 + 1231380 AAAttattt----ttttttgagacagagtctcactctgtcacccaggctggagtgcagtggtgcgatcttggctcactgcaacctctgcctcctgggttcaaacaattctcgtgcctcagcctcctgagtagctgggattacaggtgcccaccaccatacctggctaatt----tttgtatttttagtagagac--agggtttc i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22785243 198 + 22939663 I a score=426579.000000 s hg38.chr20_KI270870v1_alt 47450 60 + 183433 accatgttagccaggatggttttgatctcctgacctc--gtgatcggcccgcctcggcctcc s panTro5.chr20 66372521 60 + 66533130 accgtgttagccaggatggttttgatctcctgacctc--gtgatcagcccgcctcagcctcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053271 60 + 62195757 accgtgttagccaagatggttttgatctcctgacctc--gtgatcggcccgcctcggcctcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438636 60 - 578057 accgtgttagccaggatggttttgatctcctgacctc--gtgatcggcccgcctcggcctcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965146 60 - 110113093 accgtgttagccaggatgatctcgatctcctgacctc--gttatcggcccgcctcggcctcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693032 60 - 92844088 accatgttggccgggatggtctcgatctcctgacctc--gtgatccacccgcctcggcctcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360393 60 + 96509753 accatgttggccgggatggtctcgatctcctgacctc--gtgatccacctgcctcggcctcc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830240 60 - 16982598 accatgttggccgggatggtctcgatctcctgacctc--gtgatccacccgcctcggcctcc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633253 60 - 3785965 accgtgttagccgggatggtctcgatctcctgacctc--gtgatccacccgcctcggcctcc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90254985 60 - 90373283 accgtgttagccgggatggtctcgatctcctgacctc--gtgatccacccgcctcggcctcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12145 60 - 179258 accatgttagccgggatggtctcgatctcctgacctc--gtgatccacccgcctcggcctcc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506033 60 - 5823884 accgtgttagccgggatggtctcgatctcctgacctc--gtgatccgcccgtctcggcctcc i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16223164 62 + 16356641 actatgttagccaggctggtctccaactcctgacctcaggcaatccatatgcctcggcctcc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1088756 62 + 1231380 actatgttggccaggctggtctcgaactcctgacctcaggcaatccgtacgccttggcttcc i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e calJac3.chr5 58158026 413 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I e otoGar3.GL873542 22785243 198 + 22939663 I a score=155718.000000 s hg38.chr20_KI270870v1_alt 47510 20 + 183433 caaaatgctgggattacagg---- s panTro5.chr20 66372581 20 + 66533130 caaaatgctgggattacagg---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053331 20 + 62195757 caaaatgctgggattacagg---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438696 20 - 578057 caaaatgctgggattacggg---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965206 20 - 110113093 caaagtgctgggattacagg---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693092 20 - 92844088 caaagtgctgggattacagg---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360453 20 + 96509753 caaagtgctgggattacagg---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830300 20 - 16982598 caaagtgctgggattacagg---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633313 20 - 3785965 cagagtgctgggattacagg---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255045 20 - 90373283 caaagtgctgggattacagg---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12205 20 - 179258 cagagtgctgggattacagg---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506093 20 - 5823884 caaagtgctgggattacagg---- i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16223226 20 + 16356641 caaggtgctgggatttcagg---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1088818 20 + 1231380 caaggtgctgggattacagg---- i cebCap1.NW_016107870v1 C 0 I 332 s otoGar3.GL873542 22785441 24 + 22939663 caagagtttgaggttgctgtgagc i otoGar3.GL873542 I 198 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e calJac3.chr5 58158026 413 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=180162.000000 s hg38.chr20_KI270870v1_alt 47530 34 + 183433 catga-gccaccgtgcccagccAAG-------TTATGATGCT s panTro5.chr20 66372601 34 + 66533130 catga-gccactgcgcccagccAAG-------TTATGATGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053351 34 + 62195757 catga-gccaccgcgcccagccAAG-------TTATGATGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438716 34 - 578057 catga-gccaccgcgcccagccAAG-------TTATGATGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965226 34 - 110113093 catga-gccactgcacccagccAAG-------TTCTGATGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693112 34 - 92844088 cgtga-gccaccgtggctggccAAG-------TTATGATGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360473 34 + 96509753 cgtga-gccactgtggctggccAAG-------TTATGATGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830320 34 - 16982598 cgtga-gccaccatggctggccAAG-------TTATGATGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633333 34 - 3785965 catga-gccaccgcggctggccAAG-------TTATGATGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255065 34 - 90373283 tgtga-gccaccgtggctggcAAAG-------TTATGATGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12225 34 - 179258 catga-gccaccgcggctggccAAG-------TTATGATGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506113 34 - 5823884 catga-gccaccgcggctggccAAG-------TTATGATGCT i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16223246 21 + 16356641 tgtga-gccactgagcccagcc-------------------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22785465 42 + 22939663 tataatgccactgcactttaccaagggtgacccagtgagact i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e cebCap1.NW_016107870v1 1088838 332 + 1231380 I e calJac3.chr5 58158026 413 + 159171411 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=91595.000000 s hg38.chr20_KI270870v1_alt 47564 15 + 183433 TCTTGACATAAAATC- s panTro5.chr20 66372635 15 + 66533130 TCTTGACATAAAATC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053385 15 + 62195757 TCTTGACATAAAATC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438750 15 - 578057 TCTTGACATAAAATC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965260 15 - 110113093 TCTTGACATAAAATC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693146 15 - 92844088 TTTTGACATAAAATC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360507 15 + 96509753 TTTTGACATAAAATC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830354 15 - 16982598 TTTTGACATAAAATC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633367 15 - 3785965 TTTTGACATAAAATC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255099 15 - 90373283 TTTTGACATAAAATC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12259 15 - 179258 TTTTGACATAAAATC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506147 15 - 5823884 TTTTGACATAAAATC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158439 15 + 159171411 tctcaaaaaaTATTT- i calJac3.chr5 I 413 C 0 s saiBol1.JH378156 16223267 12 + 16356641 ---TGACATAAAttt- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22785507 14 + 22939663 --ctgtctcaaaaatc i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e cebCap1.NW_016107870v1 1088838 332 + 1231380 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=27270.000000 s hg38.chr20_KI270870v1_alt 47579 3 + 183433 TTT s panTro5.chr20 66372650 3 + 66533130 TTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053400 3 + 62195757 TTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438765 3 - 578057 TTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965275 3 - 110113093 TTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693161 3 - 92844088 TTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360522 3 + 96509753 TTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830369 3 - 16982598 TTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633382 3 - 3785965 TTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255114 3 - 90373283 TTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12274 3 - 179258 TTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506162 3 - 5823884 TTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158454 3 + 159171411 TTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16223279 3 + 16356641 ttt i saiBol1.JH378156 C 0 I 609 s cebCap1.NW_016107870v1 1089170 3 + 1231380 TTT i cebCap1.NW_016107870v1 I 332 C 0 s otoGar3.GL873542 22785521 3 + 22939663 ccc i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=123874.000000 s hg38.chr20_KI270870v1_alt 47582 15 + 183433 ---AAGC-----atta-aaacaat s panTro5.chr20 66372653 15 + 66533130 ---AAGC-----atta-aaacaat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053403 15 + 62195757 ---AAGC-----atta-aaacaat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438768 15 - 578057 ---AAGC-----atta-aaacaat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965278 15 - 110113093 ---AAGC-----atta-aaacaat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693164 15 - 92844088 ---AAGC-----atta-aaacaat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360525 15 + 96509753 ---AAGC-----atta-aaacaat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830372 15 - 16982598 ---AAGC-----atta-aaacaat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633385 15 - 3785965 ---AAGC-----atta-aaacaat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255117 15 - 90373283 ---AAGC-----atta-aaacaat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12277 15 - 179258 ---AAGC-----atta-aaacaat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506165 15 - 5823884 ---AAGC-----GTTa-aaacaat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158457 16 + 159171411 ---AAGC-----ATTAAAAACAAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16223891 16 + 16356641 ---AAGC-----ATTGTTaacaac i saiBol1.JH378156 I 609 C 0 s cebCap1.NW_016107870v1 1089173 16 + 1231380 ---AAGC-----ATtaaaaacaac i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22785524 23 + 22939663 aaaaaaCTCACTatga-aaacaat i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e aotNan1.NW_018500483v1 2620004 771 + 11732439 I a score=680696.000000 s hg38.chr20_KI270870v1_alt 47597 61 + 183433 attaaatcataaaatcagtataagaaagtctaaaacattgcagattttcctgaggtcaact--- s panTro5.chr20 66372668 61 + 66533130 attaaatcataaaatcagtataagaaagtctaaaacattgcagattttcctgaggtcaact--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053418 61 + 62195757 attaaatcataaaatcagtataagaaagtctaaaacattgcagattttcctgaggtcaact--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438783 61 - 578057 attaaatcataaaatcagtataagaaagtctaaaacattgcagattttcctgaggtcaact--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965293 61 - 110113093 attaaatcataaaatcagtataagaaagtctaaaacattgcagattttcctgaggtcaact--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693179 61 - 92844088 attaaatcataaaatcagtataaggaagtctaaaacattgcagattttcctgaggtcaact--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360540 61 + 96509753 attaaatcataaaatcagtataaggaagtctaaaacattgcagattttcctgaggtcaact--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830387 61 - 16982598 attaaatcataaaatcagtataaggaagtctaaaacattgcagattttcctgaggtcaact--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633400 61 - 3785965 attaaatcataaaatcagtataaggaagtctaaaacattgcagattttcctgaggtcaact--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255132 61 - 90373283 attaaatcataaaatcagtataaggaagtctaaaacattgcagattttcctgaggtcaact--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12292 61 - 179258 attaaatcataaaatcagtataaggaagtctaaaacattgcagattttcctgaggtcaact--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506180 61 - 5823884 attaaatcataaaatcagtgtaaggaagtctaaaacattgcagattttcctgaggtcaact--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158473 61 + 159171411 ATTAAATCATAAAATCAGTGTAAGAAAGTCTAAAACATTGCAGGTTTTTCTGAGGTCGACT--- i calJac3.chr5 C 0 I 3 s saiBol1.JH378156 16223907 61 + 16356641 attaaatcataaaatcagtgtaagaaggtctaaatcattgcaggttttcctgaggttgact--- i saiBol1.JH378156 C 0 I 3 s cebCap1.NW_016107870v1 1089189 60 + 1231380 attaaatcataaaatc-gtgtaagaaagtccaaaacattgcaggttttcctgaggttgact--- i cebCap1.NW_016107870v1 C 0 I 3 s aotNan1.NW_018500483v1 2620775 61 + 11732439 attaaatcataaaatcagtgtaagaaagtctaaaacattgcaggttttcctgaggccgact--- i aotNan1.NW_018500483v1 I 771 I 29 s otoGar3.GL873542 22785547 62 + 22939663 attaaaccataaaatcagtgtaagaaaggtcaaaac--tgcagatttcccccaggttggcaatt i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I a score=97345.000000 s hg38.chr20_KI270870v1_alt 47658 12 + 183433 taaacactta-aa s panTro5.chr20 66372729 12 + 66533130 tagacactta-aa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053479 12 + 62195757 tagacactta-aa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438844 12 - 578057 tagacactta-aa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965354 12 - 110113093 tagacacttt-aa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693240 13 - 92844088 tagacactttaaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360601 12 + 96509753 tagacacttt-aa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830448 12 - 16982598 tagacacttt-aa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633461 12 - 3785965 tagacacttt-aa i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255193 12 - 90373283 tagacacttt-aa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12353 12 - 179258 tagacacttt-aa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506241 12 - 5823884 tagacacttt-aa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158537 12 + 159171411 TAGACACTTA-GA i calJac3.chr5 I 3 C 0 s saiBol1.JH378156 16223971 12 + 16356641 tagacactta-ga i saiBol1.JH378156 I 3 C 0 s cebCap1.NW_016107870v1 1089252 12 + 1231380 tagacactta-ga i cebCap1.NW_016107870v1 I 3 C 0 s otoGar3.GL873542 22785609 12 + 22939663 tgtaaattta-aa i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47557562 397 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e aotNan1.NW_018500483v1 2620836 29 + 11732439 I a score=192313.000000 s hg38.chr20_KI270870v1_alt 47670 23 + 183433 aaaaaa--agccaaattcttaaaac s panTro5.chr20 66372741 23 + 66533130 aaaaaa--agccaaattcttaaaac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053491 25 + 62195757 aaaaaaagagccaaattcttaaaac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438856 24 - 578057 aaaaaaa-agccaaattcttaaaac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965366 23 - 110113093 aaaaaa--tgccaaattcttaaaac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693253 23 - 92844088 aaaaaa--tgccaaattcttaaaac i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360613 23 + 96509753 aaaaaa--tgccaaattcttaaaac i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830460 23 - 16982598 aaaaaa--tgccaaattcttaaaac i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633473 23 - 3785965 aaaaaa--tgccaaattcttaaaac i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255205 23 - 90373283 aaaaaa--tgccaaattcttaaaac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12365 23 - 179258 aaaaaa--tgccaaattcttaaaac i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506253 23 - 5823884 aaaaaa--tgccaaagtcttaaaac i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158549 21 + 159171411 AATA----TGCTAAGTTCTTCAAAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16223983 21 + 16356641 aata----tgctaagttcttcaaac i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1089264 21 + 1231380 aata----tgctaagttcttcaaac i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22785621 23 + 22939663 ataaaa--agccagaatctcaaaac i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47557959 23 + 47698779 aaaaaa--aGCCAAATTCTTAAAAG i canFam3.chr24 I 397 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e aotNan1.NW_018500483v1 2620836 29 + 11732439 I a score=739538.000000 s hg38.chr20_KI270870v1_alt 47693 69 + 183433 aattgtttttggtgtcctgctttgat--ggttccctaaacacttgctctgactattag-aaattctgtacCT s panTro5.chr20 66372764 69 + 66533130 aattgtttttggtgtcctgctttgat--ggttccctaaacacttgctctgactgttag-aaattctgtacCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053516 69 + 62195757 aattgtttttggtgtcctgctttgat--ggttccctaaacacttgctctgactgttag-aaattctgtacCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438880 68 - 578057 aattg-ttttggtgtcctgctttgat--ggttccctaaacacttgctctgactgttag-aaattctgtacCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965389 69 - 110113093 aattgtttttggtgtcctgctttgat--ggttccctaaacacttgctctgactgttag-aaattctgtacCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693276 69 - 92844088 aattgttttttgtgtcctgctttgat--agttccctaaacacttactctgaccattag-aaattctgtacCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360636 69 + 96509753 aattgttttttgtgtcctgctttgat--agttccctaaacacttgctCTGACCATTAG-AAATTCTGTACCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830483 69 - 16982598 aattgttttttgtgtcctgctttgat--agttccctaaacacttgctCTGACCATTAG-AAATTCTGTACCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633496 69 - 3785965 aattgtttttggtgtcctgctttgat--agttccctaaacacttgcCCTGACCATTAG-AAATTCTGTACCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255228 69 - 90373283 aattgtttttggtgtcctgctttgat--agttccctaaacacttgctctgaccgttag-aaattctgtacCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12388 69 - 179258 aattgtttttggtgtcctgctttgat--agttccctaaacacttgctCTGACCATTAG-AAATTCTGTACCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506276 69 - 5823884 aattgtttttggtatcctgctttgat--agttccctaaacacttgctctgaccgttag-aaattctgtacCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158570 69 + 159171411 AGTCGTTTTTGGTGTCCTGCTTTGAT--GATTCCCTGAACACTTGCTCTGACTGTTAG-AAAGTCTGTAGCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16224004 66 + 16356641 tgtcatttttggtgtcctgctttgat--ggttccctgaacacttgct----CTGTTAGAAAAGTCTGTACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1089285 65 + 1231380 tgccgttgttggtgtcctgctttgat--ggtttcctgaacacttgct----CTGTTGG-AAAGTCTGTAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2620865 69 + 11732439 AGTCTTTCTTGGTGTCCTGCTTTGAT--GGTTCCCTGAACACTTGCTCTGACTGTTAG-AAAGTCTGTACCC i aotNan1.NW_018500483v1 I 29 C 0 s otoGar3.GL873542 22785644 66 + 22939663 -atctgatttggtaccctactttgatagggtaccctaaacacttgTC----CTGTTAG-AAATTCAGTGTCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47557982 69 + 47698779 AATTATTTTTGGTGCTTTGCTCTGAT--AGTTTCCTAAACACTTGATTttttttttag-aaagactttattt i canFam3.chr24 C 0 I 173 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I a score=1238048.000000 s hg38.chr20_KI270870v1_alt 47762 133 + 183433 GGGTAGCTGGGGCCCCCGT-------------GGAGAGGGA-------------------GCAGCTCGCCCAGTGAGAGAGGCTTGGCCATTGTCCCGCAGGGACTCTGCTGTTGGGG---GAGCGGGCAGGGC-------------ATGTGCAGTGTGGGGTGTGGCATTCAGAGGGAGT s panTro5.chr20 66372833 133 + 66533130 GGGTAGCTGGGGCCCCCGT-------------GGAGAGGGA-------------------GCAGCTCGCCCAGTGAGAGAGGCTTGGCCATTGTCCTGCAGGGACTCTGCTGTTGggg---gagtgggcagggc-------------atgtgcagtgtggggtgtggcgtTCAGAGGGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053585 133 + 62195757 GGGTAGCTGGGGCCCCTGT-------------GGAGAGGGA-------------------GCAGCTCGCCCAGTGAGAGAGGCTTGGCCATTGTCCTGCAGGGACTCTGCTGTTGGGG---GAGCGGGCAGGGC-------------ATGTGCAGTGTGGGGTGTGGCGTTCAGAGGGAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 438948 133 - 578057 GGGTAGCTGGGGCCCCCGT-------------GGAGAGGGA-------------------GCAGCTCGCCCAGTGAGAGAGACTTGGCCATTGTCCTGCAGGGACTCTGTTGTTGGGG---GAGCGGGCAGGGC-------------ATGTGCAGTGTGGGGTGCGGCGTTCAGAGGGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965458 133 - 110113093 GGATAGCTGGGGCCCCCGC-------------GGAGAGGGA-------------------GCAGCTCGCCCAGTGAAAGAGGCTTGGCCATCGTCCTGCAGGAACTCTGCTGTTGGGG---GAGCGGGCAGAGC-------------ATGTGCAGTGTGGGATGTGGCGTTCAGAGGGAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693345 132 - 92844088 GGGTAGCTGGGGCCCCCAT-------------GGAGAGGGA-------------------GCAGCTCGTCCAGTGAGAGGGGCTTGGCCGTCATCCTGCAGGAACTCTGCTGCTGggg---gagtgggcagggc-------------atgtgcagtgtgggctgtggcgttt-gagggagt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360705 132 + 96509753 GGGTAGCTGGGGCCCCCAT-------------GGAGAGGGA-------------------GCAGCTCGTCCAGTGAGAGGGGCTTGGCCGTCATCCTGCAGGAACTCTGCTGCTGGGG---GAGTGGGCAGGGC-------------ATGTGCAGTGTGGGCTGTGGCGTTT-GAGGGAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830552 132 - 16982598 GGGTAGCTGGGGCCCCCAT-------------GGAGAGGGA-------------------GCAGCTCGTCCAGTGAGAGGGGCTTGGCCGTCATCCTGCAGGAACTCTGCTGCTGggg---gagtgggcagggc-------------atgtgcagtgtgggctgtggcgttt-gagggagt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633565 132 - 3785965 GGGTAGCTGGGGCCCCCAT-------------GGAGAGGGA-------------------GCAGCTTATCCAGTGAGAGGGGCTTGGCCGTCATCCTGCAGGAACTCTGCTGCTGggg---gagtgggcagggc-------------atgtgcagtgtgggctgtggcgttt-gagggagt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255297 132 - 90373283 GGGTAGCTGGGGCCCCCAT-------------GGAGAGGGA-------------------GCAGCTCGTCCAGTGAGAGGGGCTTGGCCGTCATCCTGCAGGAACTCTGCTGCTGGGG---GAGTGGGCAGGAC-------------ATGTGCAGTGTGGGCTGTGGTGTTT-GAGGGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12457 132 - 179258 GGGTAGCTGGGGCCCCCAT-------------GGAGAGGGA-------------------GCAGCTCGTCCAGTGAGAGGGGCTTGGCCGTCATCCTGCAGGAACTCTGCTGCTGGGG---GAGTGGGCAGGGC-------------ATGTGCAGTGTGGGATGTGGCGTTT-GAGGGAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506345 132 - 5823884 GGGTAGCTGGGGCCCCCAT-------------GGAGAGGGA-------------------GCAGCTCGTCCAGTGAGAGGGGCTTGGCCATCATCCTGCAGGAACTCTGCTGCTGggg---gagtgggcagggc-------------atgtgcagtgtgggctgtggcgttt-gagggagt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158639 151 + 159171411 GGGTGGGTGGGGCCCCCGT-------------GGAGTGGGAACAGGTGTTTGG-GCCAGTGCAGCTGGTCCGGTGAGAGCAGCTTGGCCATCGTCATGTGGGAACTCTGGTGCTGGGG---GAGCAGGCAGGGT-------------ATGGGCAGTGTGGGATGTGGTGTTCAGAGGGAGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16224070 151 + 16356641 GGGTGGGCAGGGCCCCCGT-------------GGAGAGGGAACAGGTGTTTGA-GCCAATGCAGCTCACCTGGTGAGAGCGGCTTGGCCATCGTCCTGCGGAATCTCTGGTGTTGGGG---GAACAGGCAGGGC-------------ATGGGCAGTGTGGGGTGTGGCTTTCAGAGGGAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1089350 150 + 1231380 GGGTGGGCAGGGCCCCCGT-------------GGGGAGGTGACAGCTGTTTGG-GCCAGTGCAGCTCGCCTGGTGAGAGCGGCTTGGCCATCGTCCTGCGGGAACTCTGGTGTT-GGG---GAGCAGGCAGGGC-------------ATGGGCAGTGTGGGGTGTGGCGTTCAGAGGGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2620934 150 + 11732439 GGGTGGGCAGGGCCCCCGT-------------GGAGAGGGAACATGTG-TTGG-ACCAGTGCAGCTCGCCCGGTGAGAGCGGCTTGGCCATCGTCCTGCGGGAACTCTGGTGTTGGGG---GAGCAGGCAGGGC-------------ATGGGCAGTGTGGGGTGTGGCATTCAGAGGGAGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22785710 179 + 22939663 AGGTAGGAGGGGCACCTGTGGGTCTAGATCCAGGAGAGAAAGTGGGTGTTTGGTGCCAGGGAAGACTGTCTAGCAAGAGCGACTTGGTCACTGTCCTATAGGGGCTCTAGTGCTAGAGGCAGAGGGGCCCAGCCCTGAGGATGCCTGATAGGCAGTGTCTA-TGTGATGTCA-GAATGAGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e canFam3.chr24 47558051 173 + 47698779 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I a score=828041.000000 s hg38.chr20_KI270870v1_alt 47895 101 + 183433 GGCCTCCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCCAGGGGGGCC-ATCCATGTTTCTCTTGAGGTACCTGGCAGAAGGCGG--GT--------------GGGGGGGTGCGGGGGGTGG-- s panTro5.chr20 66372966 101 + 66533130 GGCCTCCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCCAGGGGGGCC-ATCCATGTTTCTCTTGAGGTACCTGGCAGAAGGCGG--GT--------------GGGGGGGTGCAGGGGGTGG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053718 100 + 62195757 GGCCTCCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCCAGGGGGGCC-ATCCATGTTTCTCTTGAGGTACCTGGCAGAAggtgg--gt--------------gggggggtg-ggggggtgg-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439081 101 - 578057 GGCCTCCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCCAGGGGGGCC-ATCCATGTTTCTCTTGAGGTACCTGGCAGAAGGCGG--GT--------------GGGGGGGTGCGGGGGGTGG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965591 100 - 110113093 GGCCTCCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCC-GGGGGGCC-ATCCATGTTTCTCTTGAGGTACCTGGCAGAAGGCGG--GC--------------TGGGGGGTGCGGGGGGCAG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693477 101 - 92844088 ggCCTTCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCCAGGGAGGCC-ATCCATGTTTCTCTCGAGGCACCTGGCAGAAGGCGG--GC--------------GAGGGGTGGTGGGGGGTGA-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360837 101 + 96509753 GGCCTTCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCCAGGGAGGCC-ATCCATGTTTCTCTCGAGGCACCTGGCAGAAGGTGG--GC--------------GAGGGGTGGTGGGGGGTGA-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830684 101 - 16982598 ggCCTTCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCCAGGGAGGCC-ATCCATGTTTCTCTCGAGGCACCTGGCAGAAGGCGG--GC--------------GAGGGGTGGTGGGGGGTGA-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633697 101 - 3785965 ggCCTTCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCCAGGGAGGCC-ATCCATGTTTCTCTCGAGGCACCTGGCAGAAGGCGG--GC--------------GAGGCGTGGTGGGGGGTGA-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255429 93 - 90373283 GGCCTTCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAG--------GCCC-ATCCATGTTTCTCTCAAGGCACCTGGCAGAAGGCGG--GC--------------GAGGGGTGGTGGGGGGTGA-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12589 101 - 179258 GGCCTTCAC-----------------AGCCCTGTGGCCGG--GGTAGGGAGCCCAGGGAGGCC-ATCCATGTTTCTCTCGAGGCACCTGGCAGAAGGCGG--GC--------------GAGGCGTGGTAGGGGGTGA-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506477 101 - 5823884 ggCCTTCGC-----------------AGCCCTGTGGCCGG--CGTAGGGAGCCCAGGGAGGCC-ATCCATGTTTCTCTCGAGGCACCTGGCAGAAGGCGG--GC--------------GAGGGGTGGCGGGGGGTGA-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158790 94 + 159171411 GGCCTCCAC-----------------AGCCCTGTGACTGG--GGTAGGGAGCTCAGGGGAGCC-ATGGATGTTTCTCTTGAGGCACCTTGCAGAAGCCGGCAG-----------------------GTGGTGGGGGG-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16224221 91 + 16356641 GGCCTTCAC-----------------AGTCCTGTGACTGG--GGTAGGGAGCCCAGGGGAGCC-ATGGATGTTTCTCTTGAGGCACCTTGCAGAAGTGGG--G-----------------------GTGG-GGGGAG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1089500 92 + 1231380 GGCCTCCAC-----------------AGCCCTGTGACTAG--GGTAGGGAGCCCAGGGGAGCC-ATGGATGTTTCTCTTGAGGCACCTTGCAGAAGTGGG--G-----------------------GTTGGGGGGAG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2621084 92 + 11732439 GGCCTCCAC-----------------AGCCCTGTGACTGG--GGTAGGGGGCCCAGGGGAGCC-GTGGATGTTTCTCCTGAGGCATCTTGCAGCAGTGGG--G-----------------------GGCGGGGGGAG-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22785889 82 + 22939663 GACATCC-C-----------------AGCCCCATGGCTGG---GTCAGGAGCCCAGGCCAGCT-ATTAGATTTTCCTTTGGAGTACCTGGCAGAAGAGGG--G-----------------------ATG---------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47558224 137 + 47698779 agccccCACTTGCCTTGACCGTTAGAAACTCAGTGCCCAGCAGGTGGGGTACCTGTGGCGTCCTGTCCGTGCCCACCTGGGAGAGGCCAGTGGGGTTGGG--GTCCACAGGCCACCCGGGGGAGAGGTGGGCTGTGGGG i canFam3.chr24 I 173 C 0 e proCoq1.NW_012150197v1 1807166 555 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I a score=469505.000000 s hg38.chr20_KI270870v1_alt 47996 37 + 183433 TCCTTGACAGCAGAGCAGAGAG-AGATGGTGGTCAGAG s panTro5.chr20 66373067 37 + 66533130 TCCTTGACAGCAGAGCAGAGAG-AGATGGTGGTCAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053818 37 + 62195757 TCCTTGACAGCAGAGCAGAGAG-AGATGGTGGTCAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439182 37 - 578057 TCCTTGACAGCGGAGCAGAGAG-AGATGGCGGTCAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965691 37 - 110113093 TCCTTGACAGCAGAGCAGAGAG-AGATGGTGGTCAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693578 37 - 92844088 TCTTTGACAGCAGAGCAGAGAG-AGATGGTGGGCAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360938 37 + 96509753 TCTTTGACAGCAGAGCAGAGAG-AGATGGTGGGCAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830785 37 - 16982598 TCTTTGACAGCAGAGCAGAGAG-AGATGGTGGGCAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633798 37 - 3785965 TCTTTGACAGCAGAGCAGAGAG-AGATGGTGGGCAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255522 37 - 90373283 TCTTTGACAGCAGAGCAGAGAG-AGATGGTGGGCAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12690 37 - 179258 TCTTTGACAGCAGAGCAGAGAG-AGATGGTGGGCAGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506578 37 - 5823884 TCTTTGACAGCAGAGCAGAGAG-AGATGGTGGGCAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158884 37 + 159171411 TCCTTGACAGCAGAGCAGAGAG-AGATGGTGGACAGCG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16224312 37 + 16356641 TCCTTGACAGCAGAGCAGAGAG-AGACGGTGGACAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1089592 37 + 1231380 TCCTTGACAGCAGAGCAGAGAG-AGATGGTAGACAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2621176 37 + 11732439 TCCTTGAGAGCAGAGCAGAGAG-AGATGGTGGACAGAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1807721 37 - 2029793 TCCCTGACAGCAGGGCAGAGAG-AGACGGTGGGCAGAG i proCoq1.NW_012150197v1 I 555 I 664 s otoGar3.GL873542 22785971 36 + 22939663 TCTTTGACAGAAGGACAAAGGG-AGATGGCAAGCAGG- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47558361 36 + 47698779 TCCCCG--GGGACAGCAGTGAGCAGGGCGTGTGCAGGG i canFam3.chr24 C 0 C 0 e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I a score=-4680.000000 s hg38.chr20_KI270870v1_alt 48033 3 + 183433 -GC--C s panTro5.chr20 66373104 3 + 66533130 -GC--C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053855 3 + 62195757 -GC--C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439219 3 - 578057 -GC--C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965728 3 - 110113093 -GC--C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693615 3 - 92844088 -GC--C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96360975 3 + 96509753 -GC--C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16830822 3 - 16982598 -GC--C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3633835 3 - 3785965 -GC--C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255559 3 - 90373283 -GC--C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 12727 3 - 179258 -GC--C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506615 3 - 5823884 -GC--C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58158921 2 + 159171411 -GC--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16224349 2 + 16356641 -GC--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1089629 3 + 1231380 -GCC-- i cebCap1.NW_016107870v1 C 0 I 41 s aotNan1.NW_018500483v1 2621213 3 + 11732439 -GC-C- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22786007 3 + 22939663 -GC--C i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47558397 3 + 47698779 TGC--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1807758 664 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I a score=156738.000000 s hg38.chr20_KI270870v1_alt 48036 21 + 183433 CAGGCGGGCTCCGATTAGGCC s panTro5.chr20 66373107 21 + 66533130 CAGGCGGGCTCCGATTAGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053858 21 + 62195757 CAGGTGGGCTCCGATTAGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439222 21 - 578057 CAGGCGGGCTCCGATTAGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965731 21 - 110113093 CAGGCGGGCTCTGATTAGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693618 21 - 92844088 CAGGCGGGCACCGATTAGGGC i rheMac8.chr10 C 0 I 21 s macFas5.chr10 96360978 21 + 96509753 CAGGCGGGCACCGATTAGGGC i macFas5.chr10 C 0 I 21 s macNem1.NW_012014244v1 16830825 21 - 16982598 CAGGCGGGCACCGATTAGGGC i macNem1.NW_012014244v1 C 0 I 21 s cerAty1.NW_012001373v1 3633838 21 - 3785965 CAGGCGGGCACCAATTAGGGC i cerAty1.NW_012001373v1 C 0 I 21 s chlSab2.chr2 90255562 21 - 90373283 CAGGCGGGCACCGATTAGGGC i chlSab2.chr2 C 0 I 21 s manLeu1.NW_012101652v1 12730 21 - 179258 CAGGCGGGCACCGATTAGGGC i manLeu1.NW_012101652v1 C 0 I 21 s colAng1.NW_012114444v1 5506618 21 - 5823884 CAGGTGGGCACCGATTAGGGC i colAng1.NW_012114444v1 C 0 I 21 s calJac3.chr5 58158923 21 + 159171411 CAGGTGGGCACTGATGAGGGC i calJac3.chr5 C 0 I 21 s saiBol1.JH378156 16224351 21 + 16356641 CAGGTGGGCACTGACGAGAGC i saiBol1.JH378156 C 0 I 21 s aotNan1.NW_018500483v1 2621216 20 + 11732439 -AGGTGGGCACGGATGAGGGC i aotNan1.NW_018500483v1 C 0 I 21 s otoGar3.GL873542 22786010 20 + 22939663 TTGGCAGATGCCTGGCAGGC- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47558400 14 + 47698779 -------CCCCCGTCCATGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1807758 664 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I e cebCap1.NW_016107870v1 1089632 41 + 1231380 I a score=1974880.000000 s hg38.chr20_KI270870v1_alt 48057 249 + 183433 CAGGCCAGGGTCCGG------GATCCATAGGAAC--CCCTCGACCACCAACAGGGCCTTGAGCACCCTGGCCAGGGCGGAGGTAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTGGAAtttgggttaggggtagggttagggttaagttcag-------------gCGCTTGGGAACAGACAGTGACCAGGAAGC-------CTCCGGCAGCTGT---------GGGCCCCAGGGCTGAcctgctgctcgtcctgctgctcgtcctgccccgtgctccacc s panTro5.chr20 66373128 237 + 66533130 CAGGCCAGGGTCCGG------GATCCATAGGAAC--CCCTCGACCACCAACAGGGCCTTGAGCACCCTGGCCAGGGCGGAGGTAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTGGAAtttgggttaggggtagggttagggttaagttcag-------------gCGCTTGGGAACAGACAGTGACCAGGAAGC-------CTCCGGCAGCAGT---------GGGCCCCAGGGCTGACCTGCTGCTCGTCCTGC------------CCTgtgctccacc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62053879 237 + 62195757 CAGGCCAGGGTCCGG------GATCCATAGGAAC--CCCTCGACCACCAACAGGGCCTTGAGCACCCTGGCCAGGGCGGAGGTAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTGGAAtttgggttaggggtagtgttagggttaagttcag-------------gCGCTTGGGAACAGACAGTGACCAGGAAGC-------CTCCGGCAGCAGT---------GGGCCCCAGGGCTGACCTGCTGCTCGTCCTGC------------CCTgtgctccacc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439243 236 - 578057 CAGGCCAGGGTCCGG------GATCCGTAGGAAC--CCCTCGA-CACCAGCAGGGCCTTGAGCACCCCGGCCAGGGTGGAGGTAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTTGAAtttgggttaggggtagggttagggttaagttcag-------------gCGCTTGGGAACAGACAGTGACCAGGAAGC-------CTCCGGCAGCAGT---------GGGCCCCAGGGCTGACCTGCTGCTCGTCCTGC------------CCTgtgctccacc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965752 235 - 110113093 CAGGCCGGGGTCCGG------GATCCACAGGAAC--CCCTCGACCACCAACAGGGCCTTGAGCGCCCTGGCCAGGGCGGAGGTAGTCCGGG----AC--AGGACAGTGCTGCCAGTGG---TGAGTTGAAtttgggttaggggtagggttagggttaagttcag-------------gCGCTTGGGAACAGACAGTGACCAGGAAGC-------CTCTGGCAGCAGT---------GGGCCCCAGGGCTGACCTGCTGCTCGCCCTGC------------CCTgtgctccacc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92693660 235 - 92844088 CAGGCCGGGGTCCGG------GATCCGT-GGAAC--CCCTCAACCACCAATAGGGCCTTGAACACCCTGGCCACGGCAGAGGTAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTTGAATGTgggttaggggcagggttcgggttaagttcag-------------gCACTTGGG-ACAGATGGTGACCAGGAAAC-------CTCCAGCAGCAGT---------GTGCCCCAGGGCTGACCTGCTGCCCGTCCTGC------------CCTgtgctccacc i rheMac8.chr10 I 21 C 0 s macFas5.chr10 96361020 235 + 96509753 CAGGCCGGGGTCCGG------GATCCGT-GGAAC--CCCTCAACCACCAATAGGGCCTTGAACACCCTGGCCACGGCAGAGGTAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTTGAATGTgggttaggggcagggttcgggttaagttcag-------------gCACTTGGG-ACAGATGGTGACCAGGAAAC-------CTCCAGCAGCAGT---------GGGCCCCAGGGCTGACCTGCTGCCCGTCCTGC------------CCTgtgctccacc i macFas5.chr10 I 21 C 0 s macNem1.NW_012014244v1 16830867 235 - 16982598 CAGGCCGGGGTCCGG------GATCCGT-GGAAC--CCCTCAACCACCAATAGGGCCTTGAACACCCTGGCCACGGCAGAGGTAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTTGAATGTgggttaggggcagggttcgggttaagttcag-------------gCACTTGGG-ACAGATGGTGACCAGGAAAC-------CTCCAGCAGCAAT---------GGGCCCCAGGGCTGACCTGCTGCCCGTCCTGC------------CCTgtgctccacc i macNem1.NW_012014244v1 I 21 C 0 s cerAty1.NW_012001373v1 3633880 235 - 3785965 CAGGCCGGGGTCTGG------GATCCGT-GGAAC--CCCTCAACCACCAATAGGGCCTTGAACACCCTGGCCACGGCAGAGGTAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTTGAATGTGGGTTAGGGGCAGGGTTCGGGTTCAGTTCGG-------------GCACTTGGG-ACAGATGGTGACCAGGAAAC-------CTCCAGCAGCAGT---------GGGCCCCAGGGCTGACCTGCTGCCCGTCCTGC------------CCTgtgctccacc i cerAty1.NW_012001373v1 I 21 C 0 s chlSab2.chr2 90255604 235 - 90373283 CAGGCCGGGGTCCGG------GATCCGT-GGAAC--CCCTCAACCACCAATAGGGCCTTGAACACCCTGGCCATGGCAGAGGTAGCCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTTGAATGTgggttaggggcagggttcgggttaagttcag-------------gCACTTGGG-ACAGATAGTGACCAGGAAAC-------CTCCAGCAGCAGT---------GGGCCCCAGTGCTGACCTGCTGCCCGTCCTGC------------CCTgtgctccacc i chlSab2.chr2 I 21 C 0 s manLeu1.NW_012101652v1 12772 235 - 179258 CAGGCCGGGGTCTGG------GATCCGT-GGAAC--CCCTCAACCACCAATAGGGCCTTGAACACCCTGGCCACGGCAGAGGTAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---TGAGTTGAATGTGGGTTAGGGGCAGGGTTCGGGTTCAGTTCAG-------------GCACTTGGG-ACAGATGGTGACCAGGAAAC-------CTCCAGCAGCAGT---------GGGCCCCAGGGCTGACCTGCTGCCCGTCCTGC------------CCTgtgctccacc i manLeu1.NW_012101652v1 I 21 C 0 s colAng1.NW_012114444v1 5506660 232 - 5823884 CAGGCCAGGGTCCGG------GATCCGTAGGAAC--CCCTCAACCACCAATAGGGCCTTGAACACCCTGGCCATGGCAGAGATAGTCCAGG----ACAGAGGACAGTTCTGCCAGTGG---AGAGTTGAATGTGGGGTAGGGGTAGGGTTCGGGTTAAGTT-----------------CACTTGGG-ACAGATAGTGACCAGGAAAC-------CTCCAGCAGCAGT---------GGGCCCCAGGGCTGACCTGCTGCTCGTCCTGC------------CCTgtgctccacc i colAng1.NW_012114444v1 I 21 C 0 s calJac3.chr5 58158965 196 + 159171411 CAGCCTAGGGCTGGG------GATCCATAGGAAC--CCCTCAACGACCAA---GGCTTTGAACACCCTGGCCA-GGCAGAGGTAGTCCCAG----ACAGATAACGGTTCTGTCAGTGG---TGAGTTGAATTTGGGTTAGGGGTAGGATTAGGGTTAAGTTGAG-------------GCACTTGGGAACAGACACTGACTAGGAAAT-------CCCCAGTG----------------------------------------------------------GGTGTGGCCCACC i calJac3.chr5 I 21 C 0 s saiBol1.JH378156 16224393 195 + 16356641 CGGGTCAGGGCTGGG------GATCCACAGGAA---CCCTCAACCACCAA---GGCCTGGAACACCCTGGCCA-GGCAGAGGTAGTCCCGG----ACAGAGAACGGTTCTGCCAGTGG---TGAGTTGAATTTGGGCTAGGGGTAGGATTAGGGTTCAGTTGAG-------------GCACTTGGGAACAGACAGTGACCAGGAAAT-------CCCCAGCA----------------------------------------------------------GGTgtggtccacc i saiBol1.JH378156 I 21 C 0 s cebCap1.NW_016107870v1 1089673 194 + 1231380 CAGGCCAGGGCCGGG------GATCCACAGGAA---CCCTTAACCACCAA---GGCCTGGAACACCCTGGCCA-GGCAGAGGTAGTCCCGG----ACAGAGAACGGTTCTCCCAGTGG---TGAGTTGAATTTGGGTT-GGGGTAGGATTAGGGTTGAGCTGAG-------------GCACTTGGGAACAGACAGTGACCAGGAAAT-------CCCCAGCA----------------------------------------------------------GGTgtggtccacc i cebCap1.NW_016107870v1 I 41 C 0 s aotNan1.NW_018500483v1 2621257 196 + 11732439 CAGGCCAGGGCCGGG------GATCCACGGGAAC--CCCTCAACCACCAA---GGCCTTAAACACCCTGGCCA-GGCAGAGGTAGTCCTGG----ACAGAGAACAGTTCTCCCAGTGG---TGAGTTGAgtttgggttaggggtaggattacggttaagttaag-------------gCACTTGGGAAGAGACAGTGACCAGGAAAT-------CCCCAGCA----------------------------------------------------------GGTgtggtccacc i aotNan1.NW_018500483v1 I 21 C 0 s otoGar3.GL873542 22786030 215 + 22939663 -AGGCTGGGGTCTGG------GATCCATAGGAAC--ACCTG---CCCCGGTAAGGCCAGGAG--CCCTGG----GATAGGAGAGTCCCAGG----ACAGAGAAGGGTTTCACTTGTGG---TGAGTTGAATTTGGGTTAGAATTAGGGTTGAGATTAGGTTGAGGGCCCAGGAAGGTGCACTTGTGGGCAGACAGCGACCAG-----------------------------------------AGGACTGACAGGCTGCTTGTCCAAC------------CCTGTGGTCTACT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47558414 225 + 47698779 TAGGTCAAGGGGAGGCGGGGAGACCTGGCGGGACGTGCCTC---------------CTGGGGCACCT-------GGCAGGGG-GGTCCAGGGCCCACAGAGA-------TGCCAGCGGCCCTGGGTGG----TGGGGAGGATGCAGGGCC--GATGGGCTCCAC-------------GCGCA-----GCAGTCGGTTTTGGGGAAGCCACGGGGCCCCAGCA--AGTTGGGTGGAAGGGCTGAAGGGCTCATCCGCTGCCCGCCCGAC------------CCCGTGCCTGGCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1807758 664 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e dasNov3.JH569290 192529 16 - 397369 I a score=2934497.000000 s hg38.chr20_KI270870v1_alt 48306 344 + 183433 gtcctggtttgcccaggtgaaggggtttc--------caggactctccg-ttttaaaaccagcacaat-ctgggccaactgggacacactggtcaccttgctaatgtgtccctgttcctgAG-GGGGAAA-GCGGATAGGCAGTTG--TCC-------------------CCCAGGGCCCA------------------GGGAAAGAAGCCAAGGCAAGGTGCAGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACAG---AGGCCTTTG-CTGGGAGGTGCTGGGTCCTTTCCTCCAGGCAGCGCTGGGATTTGGGCC-CCGAGACCTCGTGTTTCTCTGACCCAGGGAAGAAGCCTCTGTCC------------ACTCTGGGCCTTGCCCTTCTTTTGTTTTCC s panTro5.chr20 66373365 344 + 66533130 atcctggtttgcccaggtgaaggggtttc--------caggactctccg-ttttaaaaccggcacaat-ctgggccaactgggacacactggtcaccttGCTAATCTGTCCCTGTTCCTGAG-GGGGAAA-GCGGATAGGCAGTTG--TCC-------------------CCCAGGGCCCA------------------GGGAAAGAAGCCAAGGCAAGGTGCAGACAGATT-TCCCTGCCCCAGACAAAGGGAGCTG---TGGACAG---AGGCCTTTG-CTGGGAGGTGCTGGGTCCTTTCCTCCAGGCAGCGCTGGGATTTGGGCC-CCGAGACCTCGTGTTTCTCTGACCCAGGGAAGAAGCCTCTGTCC------------ACTCTGGGCCTTGCTCTTCTTTTGTTTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054116 344 + 62195757 atcctggtttgcccaggtgaaggggtttc--------caggactctcca-ttttaaaaccggcacaat-ctgggccaactgggacacactggtcaccttGCTAATCTGTCCCTGTTCCTGAG-GGGGAAA-GTGGATAGGCAGTTG--TCC-------------------CCCAGGGCCCA------------------GGGAAAGAAGCCAAGGCAAGGTGCAGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACAG---AGGCCTTTG-CTGGGAGGTGCTGGGTCCTTTCCTCCAGGCAGCGCTGGGATTTGGGCC-CTGAGACCTCGTGTTTCTCTGACCCAGGGAAGAAGCCTCTGTCC------------ACTCTGGGCCTTGCCCTTCTTTTGTTTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439479 344 - 578057 atcctggtttgcccaggtgaaggggtttc--------caggactctccg-ttttaaaaccagcacaat-ctgggccaactgggacacactggtcaccttGCTAATGTGTCCCTGTTCCTGAG-GGGGAAA-GCGGATAGGCAGTTA--TCC-------------------CCCAGGGCCCA------------------GGGAAAGAAGCCAAGCCAAGGTGCAGACAGATT-TCCTTGCCCCAGACTAAGGGAGCTG---TGGACAG---AGGCCTTTG-CTGGGAGGTGCTGGGTCCTTTCCTCCAGGCAGCGCTGGGATTTGGGCC-CCGAGACCTCGTGTTTCTCTGACCCAGGGAAGAAGCCTCTGTCC------------GCTCTGGGCCTTGCCCTTCTTTTGTTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109965987 344 - 110113093 atcctggtttgcccaggtgaaggggtttc--------caggactctccgtttttaaaaccagcacaat-ctgggccaactgggacgcactggtcaccttGCCAATGTGTCCCTGTTCCTGAG-GGGGAAA-GCGGATAGGCAGTTG--TTG-------------------CCCAGAGCCCA------------------GGGAAAGAAGCCAAGCCAAGGTGTAGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACAG---AGGCCTTTG-CTGGGAGGTGCTGGGTCCTTTCCTCCAGGCAGCACTGGGATTTGGGCC-CCGAGACCTCGTGTTTCTCTGACCCAGGGAAGAAGCCCGTGTCC------------ACTCTGGGCCTTGCCCTTC-TTTGTTTTCC i nomLeu3.chr13 C 0 M 508 s rheMac8.chr10 92693895 319 - 92844088 atcctgctttgcccaggtgaa-gagtttc--------caggactgtccg-ttttaaaaccagcacagt-ctgggccaactgggatgcactggtcaccttGCTGGTGTGTCCCTGTTCCTGAG-GGGGAAA-GTGGGCCGGCAGCTG--TCC-------------------CCTAGGGCCCA------------------GGGAAAGAGACCAAATCAAAGTTACGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACAG---AGGCCGTCC-CTGTGAGGTG------------------------CTGGGATCTGGGCC-CCGAGACCTCATGTTTCCCTGACCCAGGGAAGAAGCCCCGGTCC------------ACTGTGGGCCTTGCCCTTCCTTTGTTTTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96361255 319 + 96509753 atcctgctttgcccaggtgaa-gggtttc--------caggactctccg-ttttaaaaccagcacagt-ctgggccaactgggatgcactggtcaccttGCTGGTGTGTCCCTGTTCCTGAG-GGGGAAA-GTGGGCCGGCAGCTG--TCC-------------------CCTAGGGCCCA------------------GGGAAAGAGACCAAATCAAAGTTACGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACAG---AGGCCGTCC-CTGGGAGGTG------------------------CTGGGATCTGGGCC-CCGAGACCTCATGTTTCCCTGACCCAGGGAAGAAGCCCCGGTCC------------ACTCTGGGCCTTGCCCTTCCTTTGTTTTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831102 319 - 16982598 atcctgctttgcccaggtgaa-gggtttc--------caggactctccg-ttttaaaaccagcatagt-ctgggccaactgggatgcactggtcaccttGCTGGTGTGTCCCTGTTCCTGAG-GGGGAAA-GTGGGCCGGCAGCTG--TCC-------------------CCTAGGGCCCA------------------GGGAAAGAGACCAAATCAAAGTTAGGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACAG---AGGCCGTCC-CTGGGAGGTG------------------------CTGGGATCTGGGCC-CCGAGACCTCATGTTTCCCTGACCCAGGGAAGAAGCCCCCGTCC------------ACGCTGGGCCTTGCCCTTCCTTTGTTTTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634115 318 - 3785965 atcctgctttgcccaggtgaa-gggtttc--------caggactctccg-ttttaaaaccagcacagt-ctgggccaactgggatgcactggtcaccttGCTGGTGTGTCCCTGTTCCTGAG-GGGGAAA-GTGGGCCGGCAGCTG--TCC-------------------CCTAGGGCCCA------------------GGGAAAGGGACCAAACCACAGTTACGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACCG---AGGCCGTCC-CTGGGAGGTG------------------------CTGGGATCTGGGCC-CCGAGACCTCGTGTTTCCCTGACCCAGGGAAAAAGCCCT-GTCC------------ACTCTGGGCCTTGCCCTTCCTTTGTTTTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90255839 318 - 90373283 atcctgctttgcccaggtgaa-gtgtttc--------taggactctctg-ttttaaaaccagcacagt-ctgggtcaactgggatgcactggtcaccttGCTGGTGTGTCCCTGTTCCTGAG-GGGGCAA-GTGGGCCGGCAGCTG--TCC-------------------CCTAGGGCCCA------------------GGGAAAGAGACCAAACCAAAGTTACGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACAG---AGGCCGTCC-CTGGGAGGTG------------------------CTGGGATCTGGGCC-CCGAGACCTCATG-TTCCCCGACCCAGGGAAGAAGCCCCTGTCC------------ACTCTGGGCCTTGCCCTTCCTTTGTTTTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13007 318 - 179258 atcctgctttgcccaggtgaa-gggtttc--------caggactctccg-ttttaaaaccagcacagt-ctgggccaactgggatgcactggtcaccttGCTGGTGTGTCCCTGTTCCTGAG-GGGGAAA-GTGGGCCGGCAGCTG--TCC-------------------CCTAGGGCCCA------------------GGGAAAGAGACCAAACCAAAGTTACGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACAG---GGGCCGTCC-CTGGGAGGGG------------------------CTGGGATCTGGGCC-CCGAGACCTCGTGTTTCCCTGACCCAGGGAGGAAG-CGCTGTCC------------ACTCTGGGCCTTGCCCTTCCTTTGTTTTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5506892 319 - 5823884 atcctgctttgcccaggagaa-gggtttc--------caggactctcca-ttttaaaaccagcacagt-ctgggccaactgggatgcactggtcaccttGCTGGTGTGTCCCTGTTCCTGAG-GGGGAAA-GTGGACCGGCAGCTG--TCC-------------------CCTAGGGCCCA-------------------GGAAAGAAACCAAACCAAAGTGCCGACAGATT-TCCCTGCCCCAGACTAAGGGAGCTG---TGGACAG---AGGCCGTCCGCTGGGAGGTG------------------------CTGGGATCTGGGCC-CCGAGACCTCATGTTTCCCTGACCCAGGGAAGAAGCCTCGGTCT------------ACTCTGGGCCTTGCCCTTCCTTTGTTTTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159161 353 + 159171411 ATCCCGGATTGCCCAGATGAAGGGATTTC--------CAGGACTCTTAG-TTTTAAAATTAGCACAAT-CTGGGCCAACTGGGACGCACAGGGCACCCTGCTGATGTGTTCGTGTTTCTGAGCAGGGAAA-GTGGATAGGCAGTTGCCCCCTG-------------TGT-CCTAGGGCCCA------------------GGAAAAAAAGCCAAATCAGAGTGCAGACAGCTT-GCCCTGCCCCAGACTGAGGGAGCTG---TGGACAG---AGGCCACCCACTGTGAGGTGCTGGGCCCCTTCCTCCAGGCAGCGCTGGGATTTGGGCC-CTGAGACCTCAGGTTTCCCTGACCCAGGGAAGAAGCCTCTGTCC------------ACTCTGGGCCCTGCCCTTCCTTTGTTTCCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16224588 353 + 16356641 atcctggattgcccagacgaaggggtttc--------caggactctcag-ttttaaaatcggcacaat-ctgggccaactgggacgcacaggtcaccctGCTGATGTGTCCGTGTTTCTGAGAGGGGAAA-GCAGATAGGCAGTTGCACCCTG-------------TGT-CCTAGGGCCGG------------------GGAAAAAAAGCCAAATCAGGGTGCAGACAGCTT-GCCCTGCCCTAGACTGAGGGAGCTG---TGGACAG---AGCCCACCCACTGTGAAGTGCTGGGCCCCTTCCTCCAGGCAGCTCTGGGATTTGGGCC-CTGAGACCTCAGGTTTTCCTGACCCAGGGAAGAAGCCTCTGTCC------------ACTCTGGGTCCTGCCCTTCCTTTGTTTCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1089867 347 + 1231380 atcccggattgcccagacgaaggagtttc--------caggactctcag-ttttaaaatcagcataat-ctgggccaactgggacatacaggtcaccctGCTGATGTGTCCGTGTTTCTGAG-GGGGAAA-GCGGATAGGAAGTTGC-CCCTG-------------TGT-CCTAGGGCCCG------------------GGAAAAGAAGCCAAATCAGAGTGCAGACAGCTT-GCCCTGCCCCAGACTGAGGGAGCTG---TGGACAG---AGGCCACCCACTGTGAGGTGCTGGGCCCCTTCCTCCAGGCAGCGCTGGGATTTGGGCC-CTGAGACCTCAGGTTTCCCTGACCCAGGGAAGAAGCCTCTGTCC------------ACTCTGGGTCCTGC----CCTTTGTTTCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2621453 333 + 11732439 atcctggattgcccagacaaaggggtttc--------caggactctcag-ttttaaaatcagcacaat-ctgggccaactgggacgcacaggtcaccctGCTGATGTATCTGTGCTTCTGACGGGGGAAA-GCGGATAGGCAGTTG--CCCCG-------------TGT-CCTAGGGCCCT------------------GGAAAAGAAGCCAAATCAGAATGCAGACAGCTT-GCCCGGCCCCAGACTGAGGGAGCTG---TGGACAG---AGGCCACCCACTGTGAGGTGCTGGGCCCCTTCCTCCAGGCAGCGCTAGGATTTAGGC-------------------CCTGACCCAGGGAAGAAGCCTCTGTCC------------ACTCTGGGCCCTGCCCTTCCTTTGTTTCCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22786245 278 + 22939663 GTACTGGTTTGCCTGGGTGAGGGGCCTTT--------TAGGACTCTTGG-CTTTAAAACCAGCACAGT-GTGGGGAGACTGGGATA-GCTGGCTGCCCTGCC-ATATGTCTGACCTGCTGTG-----------------GCCATAG--TCT-------------------GCTGCTGCT-----------------------------ACCAGGTCAAAGTG--------------------CAAACTAAGGGGGCAGGGATAGAAGG---CAGCCCCCA-CCCTGAGGTGCCTAGCACCTTCCTCC--------------------TC-CTGGGACCTCCC-TACCCCCCTTCCAGGGAACATTTCTTCACAT------------ACCCT-TGTCTTGCCCTTATACTGTTTCCT i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47558639 314 + 47698779 -CCCGGGTTTGCCC-GATGCGGGGGCTTC--------CAGGACTC--CG-TTCTAAGACCG-----------------------TGCGTCGGCCACCCTACC--TGCGTGCCGACCCCTGGT-GTGGTGGCGCTGACAGGCAGCTG--CTCCGGCGTCTGAGCGGCTGCACCTGCAGGAAA------------------GGGGACGGCGCCAGGTCCAAGGTCAGGCCG--------TGCCCCAAACCAAAAGGGCCA---CCGGCGGGGAGGGCAGCCC---------------GCCCAGCACACCTTCCAGCTCCGGG--TGAGGCG-GCGGGGCC--------------CGCAGGGAGCGGTGCGTGGGCCGTCCAAGGCCCGACACTTGGGCCAGCCTGTCCTTGGGTTTCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 192545 334 - 397369 gccctggtttacctgggacct-gggttccctggtacacagggctttcag-gtttaaaaccagaatagtcctgggcaaaccgggctgagctgaccacc-TGCTTGCGTGTCTCTGTTCCTGAC-GTGCTGA-GCCTGGC-GTGGCTG--CCC-------CCTCCTCCTGG-CTTAGGGCCCAGGGGCTGCGCAGGAGAGGGGGAAAGAGGCCGGGTCCCAGTTCAGCCCGGCTGCCCCTGCCCACAGCAAGGAGGGCTG---CGG---G---GGAGCGTTC-CAGGGCACTG------------------------CTGGGACAGGGGCTGCCCGGACC---CGCCCCCCTTGCC-----------------TGC------------ACTTGGGGTCTCGTCTTTCTTTTGATTCCT i dasNov3.JH569290 I 16 C 0 e proCoq1.NW_012150197v1 1807758 664 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I a score=156616.000000 s hg38.chr20_KI270870v1_alt 48650 35 + 183433 TTGGT------------------GGAG---GGAGGGAGAGG-AGGTCGCCAGCACTG s panTro5.chr20 66373709 35 + 66533130 TTGGT------------------GGAG---GGAGGGAGAGG-AGGTCGCCAGCACTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054460 35 + 62195757 TTGGT------------------GGAG---GGAGGGAGAGG-AGGTTGCCAGCACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439823 35 - 578057 TTGGT------------------GGAG---GGAGGGAGAGA-AGGTCACCAGCACCG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92694214 39 - 92844088 TTGGT------------------ggagggaggagggagggagggGTCGCCAGCACTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96361574 35 + 96509753 TTGGT------------------GGAG---GGAGGGAGGGA-GGGCCGCCAGCACTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831421 31 - 16982598 TTGGT-------------------------GGAGGGAGGGA-GGGTCGCCAGCACTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634433 35 - 3785965 TCGGG------------------GGAG---GGAGGGAGGGA-GGGTCGCCAGCACTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256157 35 - 90373283 TTgga------------------ggag---ggagggaggga-gggTCGCCAGCACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13325 27 - 179258 TCGG-----------------------------GGGAGGGA-GGGTCGCCAGCACTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507211 35 - 5823884 TTGGT------------------GGAG---GGAGGGAGAGA-GGGTCGCCAGCACTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159514 14 + 159171411 GTGGT------------------GGAG---GGAGG---------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16224941 35 + 16356641 GTGGT------------------GGAG---GGAGGGAGTGA-GGGCCACCGGCACTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090214 24 + 1231380 GTGGT------------------GGAG---GGAGG------------GCCGGCACTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2621786 35 + 11732439 ATGGT------------------GGAG---GGAAGGAGGGA-GGGTTGCCCGCACTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22786524 34 + 22939663 TTGGT------------------GGTA---GCAGG-AGCGA-GGGTCTCCTGTGTTC i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47558953 53 + 47698779 TTGGTGGCAGTGGCCCCGGTGTGGGCG---GCAGAGCGGGA-GGCCCGTCGGGGCTC i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 192879 19 - 397369 -----------------------------------TACTGG-CAGCGGCC--CACTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1807758 664 - 2029793 I e mm10.chr2 181730629 7241 + 182113224 I e micMur3.chr18 56799894 1763 + 57149010 I e nomLeu3.chr13 109966331 508 - 110113093 M a score=308380.000000 s hg38.chr20_KI270870v1_alt 48685 36 + 183433 TTTG---------CCCGAGTGAGG-CTCA-TTTCTCCT--------TTGTCTGCA s panTro5.chr20 66373744 36 + 66533130 TTTG---------CCCGAGTGAGG-CTCA-TTTCTCCT--------TTGTCTGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054495 36 + 62195757 TTTG---------CCCGAGTGAGG-CTCA-TTTCTCCT--------TTGTCTGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439858 36 - 578057 TTTG---------CCCGAGTGAGG-CTCA-TTTCTCCT--------TTGTCTGCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92694253 36 - 92844088 TTTG---------CCGGAGTGAGG-CTCA-CTTCTCCT--------TTGTCTGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96361609 36 + 96509753 TTTG---------CCGGAGTGAGG-CTCA-CTTCTCCT--------TTGTCTGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831452 36 - 16982598 TTTG---------CCGGAGTGAGG-CTCA-CTTCTCCT--------TTGTCTGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634468 36 - 3785965 TTTG---------CCGGAGTGAGG-CTCA-CGTCTCCT--------TTGTCTGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256192 36 - 90373283 TTTG---------CCGGAGTGAGG-CTCA-CTTCTCCT--------CTGTCTGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13352 36 - 179258 TTTG---------CCGGAGTGAGG-CTCA-CGTCTCCT--------TTGTCTGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507246 36 - 5823884 TTTG---------CCGGAGTGAGG-CTCA-TTTCTCCT--------TTGTCTGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159528 29 + 159171411 ----------------GAGTGAGG-CTTA-TTTCTATT--------TTGTCTGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16224976 36 + 16356641 TTTG---------CCTGAGTGAGG-CTTA-TTTCTCCT--------TTGTCTGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090238 36 + 1231380 TTTG---------CCGGATTGAGG-CTTA-TTTCTCCT--------TTGTCTGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2621821 37 + 11732439 TCTG---------CCTGAGTGAGG-CTTATTTTCTCCT--------TTGTCTGCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22786558 39 + 22939663 TTTTTTAC-----CTGGCATGAGG-CCCA-TTTCTCCT---------TGCCAGTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181737870 33 + 182113224 TTTC---------TTCAAGTAAGG-CCAT-TTTACTCT--------TCAACA--- i mm10.chr2 I 7241 C 0 s canFam3.chr24 47559009 34 + 47698779 TCAC---------CTGCAGTGAGG--TCA-CTTCTCCT---------TGTCTGTA i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 192898 49 - 397369 -----TGTGGCCACGGGCGTGGGGTCCCA-GCCCTCTTACACCTGCTCGCCTGTA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1807758 664 - 2029793 I e micMur3.chr18 56799894 1763 + 57149010 I e nomLeu3.chr13 109966331 508 - 110113093 M a score=32015.000000 s hg38.chr20_KI270870v1_alt 48721 2 + 183433 CA s panTro5.chr20 66373780 2 + 66533130 CA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054531 2 + 62195757 CA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439894 2 - 578057 CA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92694289 2 - 92844088 CA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96361645 2 + 96509753 CA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831488 2 - 16982598 CA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634504 2 - 3785965 CA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256228 2 - 90373283 CA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13388 2 - 179258 CA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507282 2 - 5823884 CA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159557 2 + 159171411 CA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225012 2 + 16356641 CA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090274 2 + 1231380 CA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2621858 2 + 11732439 CA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1808422 2 - 2029793 CA i proCoq1.NW_012150197v1 I 664 C 0 s otoGar3.GL873542 22786597 2 + 22939663 GA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181737903 2 + 182113224 CA i mm10.chr2 C 0 C 0 s canFam3.chr24 47559043 2 + 47698779 CA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 192947 2 - 397369 CA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56799894 1763 + 57149010 I e nomLeu3.chr13 109966331 508 - 110113093 M a score=612050.000000 s hg38.chr20_KI270870v1_alt 48723 53 + 183433 AGGCTGGACTGCCCTGCA-TTTTCATGGTAAGTTTGTTTCTTCAAGCCGTTG--TT s panTro5.chr20 66373782 53 + 66533130 AGGCTGGACTGCCTTGCA-TTTTCATGGTAAGTTTGTTTCTTCAAGCCGTTG--TT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054533 53 + 62195757 AGGCTGGACTGCCCTGCA-TTTTCATGGTAAGTTGGTTTCTTCAAGCCGTTG--TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439896 53 - 578057 AGGCTGGACTGCCCTGCA-TTTTCATGGTAAGTTTGTTTCTTCAAGCCGTTG--TT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92694291 45 - 92844088 AG--------GCCCTGCA-TTTTCATGGTAAGTTTGTTTCTTCAAGCCGTTG--TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96361647 45 + 96509753 AG--------GCCCTGCA-TTTTCATGGTAAGTTTGTTTCTTCAAGCCGTTG--TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831490 52 - 16982598 AGGCT-GACCGCCCTGCA-TTTTCATGGTAAGTTTGTTTCTTCAAGCCGTTG--TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634506 52 - 3785965 AGGCT-GACCGCCCTGCG-TTTTCATGGTAAGTTTGTTTCTTCAAGCCGTTG--TT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256230 52 - 90373283 AGGCT-GACCGCCCTGCA-TTTTCACGGTAAGTTTGTTTCTTCAAGCCGTTG--TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13390 52 - 179258 AGGCT-GACCGCCCTGCG-TTTTCATGGTAAGTTTGTTTCTTCAAGCCGTTG--TT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507284 53 - 5823884 AGGCTGGACTGCCCTGCA-TTTTCATGGTAAGTTTGTTTCTTCAAGCCGTTG--TT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159559 35 + 159171411 AGGCTGGACTGCCCTGCA--------------------TTTTC-AGCCGTTGTTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225014 52 + 16356641 AGGCTGGACTGCCCTGCA-TTTTCATGGAAAGTCTGTTTTTTC-AGCCGTTG--TT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090276 52 + 1231380 AGGCTGGCCTGCCCTGCA-TTTTCAAGGAAAGTCTGTTTTTAC-AGCCGTTG--TT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2621860 52 + 11732439 AGGCTGGACCGCCCTGCA-TTTTCATGGTAAGTCTGTTTTTTC-AGCCGTTG--TT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56801657 52 + 57149010 AGGCTGGGCTTCTCTGCA-TTTTCATGGCAAGTTTGTTT-TTCAAGCTGTTG--TT i micMur3.chr18 I 1763 I 20 s proCoq1.NW_012150197v1 1808424 52 - 2029793 AGGCTGGACTTCTCTGCA-TTTTCATGGTGAGTTTGTTT-TTCAAGCCGTTG--TT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22786599 52 + 22939663 AGGCTGGACTTCTCTGCA-TTTTCATGGCAAGTTTATTT-TTTGAGATGTTG--TT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181737905 42 + 182113224 -------ACAGCATTACATTTTTTATG----GTTGGTTTTCTC-GGCTTCAG--TT i mm10.chr2 C 0 C 0 s canFam3.chr24 47559045 52 + 47698779 AGGCTGGACTGCTCTGCA-TTTTCATGGTAAATTTGTTTTCTG-AGCCGTTG--TT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 192949 51 - 397369 AGGCTGGCCTGCTCTGCA-TTTCCATGGCAGATTTGTTTC--CAAGCCGTTG--CT i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 109966331 508 - 110113093 M a score=80848.000000 s hg38.chr20_KI270870v1_alt 48776 6 + 183433 AAAATC s panTro5.chr20 66373835 6 + 66533130 AAAATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054586 6 + 62195757 AAAATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439949 6 - 578057 AAAATC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92694336 6 - 92844088 AAAATC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96361692 6 + 96509753 AAAATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831542 6 - 16982598 AAAATC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634558 6 - 3785965 AAAATC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256282 6 - 90373283 AAAATC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13442 6 - 179258 AAAATC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507337 6 - 5823884 AAAATC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159594 6 + 159171411 GAAATC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225066 6 + 16356641 GAAATT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090328 6 + 1231380 GAAATC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2621912 6 + 11732439 GAAATC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1808476 6 - 2029793 AAAATA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22786651 6 + 22939663 AAAATA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181737947 6 + 182113224 GAAATC i mm10.chr2 C 0 C 0 s canFam3.chr24 47559097 6 + 47698779 GAAATT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 193000 6 - 397369 GAAATT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56801709 20 + 57149010 I e nomLeu3.chr13 109966331 508 - 110113093 M a score=2603172.000000 s hg38.chr20_KI270870v1_alt 48782 159 + 183433 CTGGAGGCAGAGAAAATGCATTTGCTCCATCACCTTCCCTGAGGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATGAAATCCCTGCTCAGAGCTGCTCTGTGAATGAATGTGGAATCAGAATTTAAATTAAAATGTTGCTCTTGTTGTC-TGGAGG s panTro5.chr20 66373841 159 + 66533130 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTCCCTGAGGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATGAAATCCCTGCTCAGAGCTGCTCTGTGAATGAATGTGGAATCAGAATTTAAATTAAAATGTTGCTCTTGTTGTC-TGGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054592 159 + 62195757 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTCCCTGAGGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATGAAATCCCTGCTCAGAGCTGCTCTGTGAATGAATGTGGAATCAGAATGTAAATTAAAATGTTGCTCTTGTTGTC-TGGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 439955 159 - 578057 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTCCCTGAGGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATAAAATCCCTGCTCAGTGCTGCTCTGTGAATGAATGTGGAATCAGAATTTAAGTTAAAATGTTGCTCTTGTTGTC-TGGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92694342 159 - 92844088 CTGGAAGCAGAGAAAATGCATTTACTCCATCACCTTTCCTGATGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATGAAATCCCTGCGCAGAACTGTTCTGTGAATGAATGCGGAATCAGAATTTAAATTAAAATGTTGTTTTTGTTGTC-TGGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96361698 159 + 96509753 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTTCCTGATGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATGAAATCCCTGCGCAGAACTGTTCTGTGAATGAATGCGGAATCAGAATTTAAATTAAAATGTTGTTTTTGTTGTC-TGGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831548 159 - 16982598 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTTCCTGATGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATGAAATCCCTGCGCAGAACTGTTCTGTGAATGAATGCGGAATCCGAATTTAAATTAAAATGTTGTTTTTGTTGTC-TGGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634564 159 - 3785965 CTGGAAGCAGAGAAAATGCATTTGCTCCGTCACCTTTCCTGATGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATGAAATCCCTGCGCAGAGCTGTTCTGTGAATGAATGCGGAATCAGAATTTAAATTAAAATGTTGTTTTTGTTGTC-TGGAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256288 159 - 90373283 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTTCCTGATGTGACAAGTCCTGTAAAACCTGTTAAAGCCTTTAATGAAATCCCTGAGCAGAGCTGTTCTGTGAATGAATGCGGAATCAGAATGTAAATTAAAATGTTGTTTTTGTTGTC-TGGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13448 159 - 179258 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTTCCTGATGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATGAAATCCCTGCGCAGAGCTGTTCTGTGAATGAATGCGGAATCAGAATTTAAATTAAAATGTTGTTTTTGTTGTC-TGGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507343 159 - 5823884 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTTCCTGATGTGACAAGTCCTATAAAACCTGTTAAAGCCTTTAATGAAGTCCCTGCGCAGAGCTGTTCCGTGAATGAATGTGGAATCAGAATTTAAATTAAAATGTTGTTTTTGTTGTC-TGGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159600 158 + 159171411 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACT-TTCCCGATGTGACAAGTCCTATAAAATCTGTTAGAGCCTTTAATGAAACCCCTGCTCAGAGCTGCTCTGTGAATGAATGTGGAATCAAAATTTAAATTAAAATGTTGTTTTTGTTGTC-TGGAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225072 157 + 16356641 CTGGAAGCAGAGAAAATGCATTTGCTCCGTCACC-TTCCTGATGTGACAAGTCTTATAAAATCTGTTAGAGCCTTT-ATGAAACCCCTGCCCAGAGCTGCTCTGTGAATGAATGTGGAATCAGAATTTAAATTAAAAGGTTGCTTTTGTTGTC-TGAAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090334 158 + 1231380 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACC-TTCCTGATGTGACAAGTCCTATAAAATCTGTTAGAGCCTTTAATGAAACCCCTGCCCAGAGCTGCTCTGTGAATGAATGTGGAATCAGAATTTAAATTAAAAGGTGGTTTTTGTTGTC-TGGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2621918 159 + 11732439 CTGGAAGCAGAGAAAATGCATTTGCTCCGTCACCTTTCCCGATGTGACAAGTCCCATAAAATCTGTTAGGGCCTTTAATGAAACCCCTGCTCAGAGCTGCTCTGTGAATGAAGGTGGAATCAGAATTTAAATTAAAATGTTGTTTTTGTTGTC-TGGAGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56801729 159 + 57149010 CTGGAAGCGGAGAAAATGCATTTGCTCTGTCACCTTTCCCCATGTGACAAGTCCTGTAAAATCTATTAAAGCCTTTAATGAAATCCCTGCTCAGAGCTGCTCTGTGAATGAATGTGGAATTGGAATTTAAATTAAAATGTTGTTTTTGTAGTC-TAGAGG i micMur3.chr18 I 20 I 587 s proCoq1.NW_012150197v1 1808482 159 - 2029793 CGGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTCCGTGATGTGGCAAGTTCTGTAAAATCTATTAAAGCCTTTAATGACATCCCTGCTCAGAGCTGCTCTGTGAACGAATGCGGAATTGAAATTTAAATTAAAATGTTGTTTTTGTAGTC-TAGAGG i proCoq1.NW_012150197v1 C 0 I 507 s otoGar3.GL873542 22786657 159 + 22939663 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTTCCTGATGTGACAAGTTCTATAAAATCTATTAAAGCCTTTAATAAAATCCCTGCTCAGAGCTGTTCCATGAATGAATGTGGAATTGGAATTTAAATTAAAATATTGTTTTTGCAGTC-TAGAGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181737953 156 + 182113224 TCAGAAATAGAGAAAGCACAATTGTTCCATTACCTTTCTTGATGGGGTACCTCCAATAAAATGTATTAAAGTC-TTAATGAAATCTCTGCTTGGAGCAGCTCC-TGAATGAACTTAGAATCAAAATTTAAATTAAAATGTTGCT-TTGCAGGG-TAGAAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47559103 160 + 47698779 CTGGAGGCAGAGAAAATGCATTTGCTCCATCACCTTTCCGGATGTGACAAGTCCTATAAAATCTATTAAAGCCTTTAATGAAATCCCTGCTCAGAGTTGCTCCGTGAATGAATGTGGAATCGGAATTTAAATTAAAATGTTGTTTTTGTAGTCGTGGAGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 193006 157 - 397369 CTGGAAGCAGAGAAAATGCATTTGCTCCATCACCTTTCCGGATGTGACAAGTCCTATAAAATCTATTAAAGCCTTTAATGAAACCTCTGCTCAGAGCTGC-ATGTGAATGAACGTGGAATTGGAATTTAAATTAAAATGTTGTT-TGGTAGTC-TGGAGG i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 109966331 508 - 110113093 M a score=1018052.000000 s hg38.chr20_KI270870v1_alt 48941 103 + 183433 CTTTGCCTGGGAAGAAATGAAAGGGGCAG--CTCACCTTTC--TGCCACCGT----TCTCAGGCCGGGT--GGGCG-CCATGACTAGCCACCCTCTGACCCAGGGCTGGGGGC--C s panTro5.chr20 66374000 103 + 66533130 CTTTGCCTGGGAAGAAATGAAAGGGGCAG--CTCACCTTTC--TGCCACCGT----TCTCAGGCCGGGT--GGGCG-CCATGACTAGCCACCCTCTGACCCAGGGCTGGGGGC--C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054751 103 + 62195757 CTTTGCCTGGGAAGAAATGAAAGGGGCAG--CTCACCTTTC--TGCCACCGT----TCTCAGGCCGGGT--GGGCG-CCATGACTAGCCACCCTCTGACCCAGGGCTGGGGGC--C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440114 103 - 578057 CTTTGCCTGGGAAGAAATGAAAGGGGCAG--CTCACCTTTC--TGCCACCGT----TCTCAGGCCAGGT--GGGCG-CCATGACTAGCCACCCTCTGACCCAGGGCTGGGGGC--C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92694501 101 - 92844088 CTTTGCCTGGGAAGAAATTAAAGGGGCAG--CTCACCTTTC--TGCCACCA------CTCAGGTCAGGT--GGGCG-CCACGGCTAGTCACCCTCTGACCCAGCGCTGGGGGC--C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96361857 101 + 96509753 CTTTGCCTGGGAAGAAATTAAAGGGGCAG--CTCACCTTTC--TGCCACCA------CTCAGGTCAGGT--GGGCA-CCACGGCTAGTCACCCTCTGACCCAGCGCTGGGGGC--C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831707 101 - 16982598 CTTTGCCTGGGAAGAAATTAAAGGGGCAG--CTCACCTTTC--TGCCACCA------CTCAGGTCAGGT--GGGCG-CCACAGCTAGTCACCCTCTGACCCAGCGCTGGGGGC--C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634723 101 - 3785965 CTTTGCCTGGGAAGAAATTAAAGGGGCAG--CTCACCTTTC--TGCCACCA------CTCAGGCCAGGT--GGGCG-CCATGGCTAGTCACCCTCTGACCCAGCGCTGGGGGC--C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256447 101 - 90373283 CTTTGCCTGGGAAGAAATTAAAGGGGCAG--CTCACCTTTC--TGCCACCA------CTCAGGCCAGGT--GGGCG-CCATGGCTAGTCACCCTCTGACCCAGCGCTGGGGGC--C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13607 101 - 179258 CTTTGCCTGGGAAGAAATTAAAGGGGCAG--CTCACCTTTC--TGCCACCA------CTCAGGCCAGGT--GGGCG-CCATGGCTAGTCACCCTCTGACCCAGCGCTGGGGGC--C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507502 103 - 5823884 CTTTGCCTGGGAAGAAATTAAGGGGGCAG--CTCACCTTTC--TGCCGCCAC----TCTCAGGCCGGGT--GGGCG-CCATGACTAGTCACCCTCTGACCCAGCGCTGGGGGC--C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159758 97 + 159171411 CTTTGCCTGGGAAGAAATTAAAGGGGCAG--CTCACCTTTC--TGCACCCAT----TCTCAGGTTGGGT--GGGTG-CCATGACTCG-----GCCTGACCCAGGGCT-GGGGC--C i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225229 102 + 16356641 CTTTGCATGGGAAGAAATTAAAGGGGCAG--CTCACCTTTC--TGCGCCCAT----TCTCAGGCCGGGT--GGGCG-CCATGACTCACCACCCCCTGACCCAGGGCG-GGGGC--C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090492 102 + 1231380 CTTTGCCTGGGAAGAAATTAAAGGGGCAG--CTCACCTTTC--TGCACCCAT----TCTCAGGCCAGGT--GGGTG-CCATGACTCGCCACCCCCTGACCCAGGGCT-GCGGC--C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2622077 104 + 11732439 CTTTGCCTGGGAAGAAATTAAAGGGGCAGCTCTCACCTTTC--TGCACCCAT----TCTCAGGCCTGGT--GGGTG-CCATGACTTGCCACCCCCCGACCCAGGGCT-GGGGC--C i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22786816 99 + 22939663 CTTTGCCTGGAAAGAAGTTAAAGGGACTG--CTCACC-TTC--TGCCGCCAT----TCTCAGGCTGGGT--GAGCA-CCTTTCTTGG----CCTCAGG-CCAGTTCTGGGAGCTGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181738109 97 + 182113224 CTTTACCTAGGAAGAAATTAAAGGG-TAG--TTTGCTTCTCATTACTACTGT----TCTTGGGCTCTAT--GGGCA-CCATGCCTAGAGACCCTCCAACGT-------GGTGC--C i mm10.chr2 C 0 C 0 s canFam3.chr24 47559263 103 + 47698779 CTTTGCTGGGGAAGAA-TTAAAGGGACAG--GTCACCTTCT--TACCGTCAT----TCTCAGGCTCACT--GGGTGACCGCGCTTGGCGGCCCTCTGGCTGGGTGCGGAGGGC--C i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 193163 102 - 397369 CTTTGCCGGGGAAGGCGCTAAGGGGACAG--CTCACCTTTC--TACCACCAGGAGAGGCCAGAGCGGGCAGGGGTG-CTGTGCTTGG-------CTGACACTGTGCCTGGTGC--C i dasNov3.JH569290 C 0 I 997 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e micMur3.chr18 56801888 587 + 57149010 I e nomLeu3.chr13 109966331 508 - 110113093 M a score=563968.000000 s hg38.chr20_KI270870v1_alt 49044 67 + 183433 CACCTGTGACTCACGGGCTGGGTCAAGATGCTAGCTGGATTTCAAGGCAGTGGCTCTCCCCACACCT s panTro5.chr20 66374103 67 + 66533130 CACCTGTGACTCACAGGCTGGGCCAAGATGCTAGCTGGATTTCAAGGCAGTGGCTCTCCCCACACCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054854 67 + 62195757 CACCTGGGACTCACGGGCTGGGCCAAGATGCTAGCTGGATTTCAAGGCAGTGGCTCTCCCCACACCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440217 67 - 578057 CACCTGTGACTCACGGGCTGGGCCAAGATGCTAGCTGGATTTCAAGGCAGTGGCTCTCCCCACACCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92694602 67 - 92844088 CACTCGTGACTCACGGGCTGGGCCAAGGTGCTAGCTGGATTTCAAGGCAGTGGCTCTCTCCACACCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96361958 67 + 96509753 CACTCGTGACTCACGGGCTGGGCCAAGGTGCTAGCTGGATTTCAAGGCAGTGGCTCTCTCCACACCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831808 67 - 16982598 CACTCATGACTCACGGGCTGGGCCAAGGTGCTAGCTGGATTTCAAGGCAGTGGCTCTCTCCACACCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634824 67 - 3785965 CACTCGTGACTCACGGGCTGGGCCAAGGTGCTAGCTGGATTTCAAGGCAGTGGCTCTCCCCACACCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256548 67 - 90373283 CACTCGTGACTCACGGGCTGGGCCAAGGTGCTAGCTGGATTTCAAGGCAGTGGCTCTCCCCCCACCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13708 67 - 179258 CACTCGTGACTCACGGGCTGGGCCAAGGTGCTAGCTGGATTTCAAGGCAGTGGCTCTCCCCACACCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507605 50 - 5823884 CACTCGTGACTCACGG-----------------GCTGGATTTCAAGGCAGTGGCTCTCCTCACACCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159855 67 + 159171411 CACCTGTGACTCAGGTGCTGGGCCAAGGTGCCAGCCGGATTTCAAGGCTGTGGCTGTCCCCACACCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225331 67 + 16356641 CACCTGTGACTCAGGTGCTGGGCCAAGGTGCCGGCTGGATTTCAAGGCAGCGGCTGTCCCCACACCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090594 67 + 1231380 CACCTGTGACTCAGGTGCTGGGCCAAGGTGCTAGCTGGATTTCAAGGCCACAGCTGTCCCCACACCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2622181 67 + 11732439 CACCTGTGACTCAGGTGCTGGGCCAACGTGCCAGCTGGATTTCAAGGCAGCGGCTGTCCCCACACCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22786915 36 + 22939663 CAC---TGCCT---AGGCTTGGCTGAGGTGCTGGCTGGATGC------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181738206 66 + 182113224 TGACT-TGAATCCATGGCTGGGCCTAGGGTTTGGCCAGATGAGAAGGTAGTGGCTGCCTCCTGACTC i mm10.chr2 C 0 I 5 s canFam3.chr24 47559366 60 + 47698779 CTCCTCGGAGCTTTGG--TTGGGCGAGGCGTGAGCTGG----CATGGCCTTGGCCGTCCCTAACCC- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e nomLeu3.chr13 109966331 508 - 110113093 M a score=585370.000000 s hg38.chr20_KI270870v1_alt 49111 64 + 183433 GAGACTGTCCCTGCTGCAGGCCCCACAGAAAATCC----CACTGAGGGGGAAGGTGGGTGTGCCTGTG s panTro5.chr20 66374170 64 + 66533130 GAGACTGTCCCTGCTGCAGGCCCCACAGAAAATCC----CACTGAGGGGGAAGGTGGGTGTGCCTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054921 64 + 62195757 GAGACTGTCCCTGCCGCAGGCCCCACAGGAAATCC----CACTGAGGGGGAAGGTGGGTGTGCCTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440284 63 - 578057 GAGACTG-CCCTGCCGCAGACCCCACAGAAAATCC----CACTGAGGGGGAAGGTGGGTGTGCCTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109966839 64 - 110113093 GAGACTGTCCCCACCGCAGGCCCCACAGAAAATCA----CGCTGAGGGGGAAGGTGGGTGCGCCTGTG i nomLeu3.chr13 M 508 C 0 s rheMac8.chr10 92694669 63 - 92844088 GAGACTGTCCCCACCACAGGCCCCACAGAAAATCC---ACACTGAGGGGGAAGGTGGGT--GCCTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362025 63 + 96509753 GAGACTGTCCCCACCACAGGCCCCACAGAAAATCC---ACACTGAGGGGGAAGGTGGGT--GCCTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831875 63 - 16982598 GAGACTGTCCCCACCACAGGCCCCACAGAAAATCC---ACACTGAGGGGGAAGGTGGGT--GCCTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634891 63 - 3785965 GAGACTGTCCCCACCACAGGCCCCACAGAAAATCC---ACACTGAGGGGGAAGGTGGGT--GCCTGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256615 63 - 90373283 GAGACTGTCCCCACCACAGGCCCCACAGAAAATCC---ACACTGAGGGGGAAGGTGGGT--GCCTGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13775 63 - 179258 GAGACTGTCCCCACCACAGGCCCCACAGAAAATCC---ACACTGAGGGGGAAGGTGGGT--GCCTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507655 63 - 5823884 GAGACTGTCCCCACCGCAGGCCCCACAGAAAATCC---ACACTGAGGGGGAAGGTGGGT--GCCTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159922 62 + 159171411 GAGACTGTCCCCCCTACAGGCCTCACAGAAAATCC---ACATTGAGGGGGAAGTCGGT---GCCTGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225398 60 + 16356641 GAGACTGTCCCCACTGCAGGCCTCACAGAAAATCC---ACACC--TGGGGAAGGCGGC---GCCTGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090661 62 + 1231380 GAGGCTGTCCCCACTGCAGGCCTCACAGAAAATCC---ACACTGAGGGGCAAGGCGGC---GCCTGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2622248 62 + 11732439 GAGACTGTCCCCACCACAGGCCTCACAGAAAATCC---ACACTGAGGGGGAAGGCGGC---GCCTGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22786951 24 + 22939663 --------------------------------------------AGAGGGGAAGCAGATGCACCTGGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181738277 64 + 182113224 ACTACTGTCCTTATCCAGGGCACTACAAAAAATGCTAGGCAGAGGGGAGAGAGGTGG----CCCTGTG i mm10.chr2 I 5 I 7856 s canFam3.chr24 47559426 62 + 47698779 CTGCCTGTCCCCACCTCAGGCCGTACAGAAGACGC----CACGTACGG--AAGGCAGGTGCAGCTGTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I a score=2285512.000000 s hg38.chr20_KI270870v1_alt 49175 276 + 183433 GACCAGGTAGCCACTTGGGACTGGAGGT---TTTATGTACTCAGAAGCAGAGTCAGTCCCTGAGCTCACAGGCTGATAGCAGGGGTGTGGGCAGACAGC------CGCCCTGGAAGAGG-----------AAAGAAGAAAGTGAG-AGCGACTAAGGGGCTCTGGGGTGTGTGAGTGGGTTGGTGCAAGGTGGAAAGGAGGCAGGGAATGTCTTCCCAAATGAAGGG---A--GCAGGTGGGAGGCCAAGGCAACGGGCA-TGAGGCCTGGAGGCCTCGTGGCTTGGCTGG-GGGCAGTACCAG--- s panTro5.chr20 66374234 276 + 66533130 GGCCAGGTAGCCACTTGGGACTGGAGGT---TTTATATACTCAGAAGCAGAGTCAGTCCCTGAGCTCACGGGCTGATAGCAGGGGTGTGGGCAGACAGC------CCCCCTGGAAGAGG-----------AAAGAAGAAAGTGAG-AGCGACTAAGGGGCTCTGGGGTGTGTGAATGGGTTGGTGCAAGGTGGAAAGGAGGCAGGGAATGTCTTCCCAAATGAAGGG---A--GCAGGTGGGAGGCCAAGGCAACGGGCA-TGAGGCCTGGAGGCCTCGTGGCTTGGCTGG-GGGCAGTACCAG--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62054985 276 + 62195757 GACCAGGTGGCCACTTGGGACTGGAGGT---TTTATGTACTCAGAAGCAGAGTCAGTCCCTGAGCTCACAGGCTGATAGCAGGGGTGTGGGCAGACAGC------CCCCCTGGAAGAGG-----------AAAGAAGAAAGTGAG-AGCGACTAAGGGGCTCTGGGGTGTGTGAATGGGTTGGTGCAAGGTGGAAAGGAGGCAGGGAATGTCTTCCCAAATGAAGGG---A--GCAGGTGGGAGGCCAAGGCAACGGGCA-TGAGGCCTGGAGGCCTCGTGGCTTGGCTGG-GGGCAGTACCAG--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440347 276 - 578057 GACCAGGTAGCCACTTGGGACTGGAGGT---TTTATGTACTCAGAAGCAGAGTCAGTCCCTGAGCTCACAGGCTGATAGCAGGGGTGTGGGCAGACAGC------CGCCCTGGAAGAGG-----------AAAGAAGAAAGTGAG-AGCGACTAAGGGGCTCTGGGGTGTGTGAATGGGTTGGTGCAAGGTGGAAAGGAGGCAGGGAATGTCTTCCCAAATGAAGGG---A--GCAGGTGGGAGGCCAAGGCAACGGGCA-TGAGGCCTGGAGGCCTCGTGGCTTGGCTGG-GGGCAGTACCAG--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109966903 276 - 110113093 GACCAGGTAGCCACTTGGGACTGGAGGT---TTTATATACTCAGAAGCAGAGTCAGTCCGCGAGCTCACAGGCTGACAGCAGGGGTGTGGGCAGACAGC------TGCCCTGGAAGAGG-----------AAGGAAGAAAGTGAG-AGTGACTAAGGGGCTCTGGGGTGTGTGAATGGGTTGGTGCAAGGTGGAAAGGAGGCAGGGAACGTCTTCCCAGATGAAGGG---A--GCAGGTGGGAGGCCAAGGCAAGGGGCA-TGAGGCCTGGAGGCCTCGTGGCTTGGCTGG-GGGCAGTACCAG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92694732 235 - 92844088 GATCAGGTAGCCACTTGGGACTGGAGGT---TTTATGTACTCAGAAGCAGA--------------------------------------GGCAGACAGT------CGCCCTGGAAGAGG-----------AAGGAAGAAAGTGAG-AGTGACCAAGGGGCTC--GGCTGTGTGAATGGGTTGGTGCAAGGTGGAAAGGAGGCAGGGAACGTCTTCCCAGAGGAAGGG---A--GCAGGTGGGAGGCCAAGGCAAGGGGCA-TGAGGCCTGGAGG-CTTGTGGCTTGGCCGG-GGGCAGTGGCAG--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362088 235 + 96509753 GATCAGGTAGCCACTTGGGACTGGAGGT---TTTATGTACTCAGAAGCAGA--------------------------------------GGCAGACAGT------CTCCCTGGAAGAGG-----------AAGGAAGAAAGTGAG-AGTGACCAAGGGGCTC--GGCTGTGTGAATGGGTTGGTGCAAGGTGGAAAGGAGGCAGGGAACGTCTTCCCAGAGGAAGGG---A--GCAGGTGGGAGGCCAAGGCAAGGGGCA-TGAGGCCTGGAGG-CTTGTGGCTTGGCCGG-GGGCAGTGGCAG--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16831938 235 - 16982598 GATCAGGTAGCCACTTGGGACTGGAGGT---TTTATGTACTCAGAAGCAGA--------------------------------------GGCAGACAGT------CGCCCTGGAAGAGG-----------AAGGAAGAAAGTGAG-AGTGACCAAGGGGCTG--GGCTGTGTGAATGGGTTGGTGCAAGGTGGAAAGGAGGCAGGGAACGTCTTCCCAGAGGAAGGG---A--GCAGGTGGGAGGCCAAGGCAAGGGGCA-TGAGGCCTGGAGG-CTTGTGGCTTGGCCGG-GGGCAGTGGCAG--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3634954 235 - 3785965 GATCAGGTAGCCACTTGGGACTGGAGGT---TTTATGTACTCAGAAGCAGA--------------------------------------GGCAGACAGC------CGCCCTGGAAGAGG-----------AAGGAAGAAAGTGAG-CGTGACCAAGGGGCTC--GGCTGTGTGAATGGGTTGGTGCAAGGTGGAAAGGAGGCAGGGAACATCTTCCCAGAGGAAGGG---A--GCAGGTGGGAGGCCAAGGCAAGGGGCA-TGAGGCCTGGAGG-CTTGTGGCTTGGCCGG-GGGCAGTGGCAG--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256678 233 - 90373283 GATCAGGTAGCCACTTGGGACTGGAGGT---TTTATGTACTTGGAAGCAGA--------------------------------------GGCAGACAGC------CGCCCTGGAAG---------------GGGAAGGAAGTGAG-AGTGACCAAGGGGCTCCGGGGTGTGTGAATGGGTTGGTGCAAGGTGGAAAGGAGACAGGGAACGTCTTCCCAGATGAAGGG---A--GCAGGTGGGAGGCCAAGGCAAGGGGCA-TGAGGCCTGGAGG-CTTGTGGCTTGGCCGG-GGGCAGTGGCAG--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 13838 235 - 179258 GATCAGGTAGCCACTTGGGACTGGAGGT---TTTATGTACTCAGAAGCAGA--------------------------------------GGCAGACAGC------CGCCCTGGAAGAGG-----------AAGGAAGGAAGTGAG-AGTGACCAAGGGGCTC--GGCTGTGTGAATCAGTTGGTGCAAGGTGGAAAGGAGGCAGGGAACGTCTTCCCAGATGAAGGG---A--GCAGGTGGGAAGCCAAGGCAAGGGGCA-TGAGGCCTGGAGG-CTTGTGGCTTGGCCGG-GGGCAGTGGCAG--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507718 237 - 5823884 GATCAGGTAGCCACTTGGGACTGGAGGT---TTTATGTACTCAGAAGCAGA--------------------------------------GGCAGACAGC------CGCCCTGGAAGAGG-----------AAGGAAGAAAGGGAG-AGTGACCAAGGGGCTCTGGGGTGTGTGGATGGGTTGGTGCGAGGTGGAAAGGAGTCAGGGAACGTCTTCCCAGATGAAGGG---A--GCAGATGGGAGGTCAAGGCAAGGGGCA-TGAGGCGTGGAGG-CTGGTGGCTTGTCTGG-GGGCAGTGGCCG--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58159984 282 + 159171411 GACCAGGCGGCTGCTTGGGACTGGAGGC---TGTGTGTACTCAGAAGCAGAGGCAGTCTCTGAGCTCACAGGCTCACAGCAGGGGTGCGGGCAGACAGCGCCCT-GGCCCTGGATGAGG-----------AAGGAAGAAGGTGAG-AGTGATTAAGGGGCTCTGGGGGCTGTGAATGGGTTGCTGCAAGGTGGAAAGGAGGCAGGGAACATCTTCCCAGATGAACAGAGAA--GCAGGCGGAAGGCCCAGGCAAGGGGCA-TGAGGC-TGGAGG-CCTGTGGCCTGGCTGG-GGGCAGTGCCAG--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225458 282 + 16356641 GACCAGGTAGCTGCTTGGGACTGGAGGC---TGTGTGTACTCAGGAGCGGAGGTAGTCTCTGAGCTCGCAGGCTCACAGGAGGGGTTCGGGCAGACAGCACCCTGGGCCCTGGACGAGG-----------AAGGAGGAAGGTGAG-AGTGATTAACGGGCTCTGGGGGGTGTGACTAGGTTGCTGCCAGGTGGAAAGGAGGCAGGGAACATCTTCCCAGATGAACGGAGAA--GCAGGTGGAAGGCCCAGGCGAGAGGCA-TGAGGC-TGGAGG-CCTGCGGCCTGGCT-G-GGGCAGTGCCAG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1090723 281 + 1231380 GACCAGGTAGCTGCTTGGGACTGGAGGC---TGTGTGTACTCAGAAGCAGAGGCAGTCTCTGAGCTCACAGGCTCACAGCAGGGGTGCGGGCAGACAG--CCCTGGGCCCTGGACCAGG-----------AAGGAAGAAGGTGAG-AGTGATTAAGGGGCTCTGGGGGGTGTGAATCGGTTGCTGCAAGGTGGAAAGGAGGCAGGGAACATCTTCCCAGATGAACGGAGAA--GCAGGTGGAAGGCCCAGGCAAGGGGCA-TGAGGC-TGGAGG-CCTGCGGCTTGGCTGG-GGGCAGTGTCAG--- i cebCap1.NW_016107870v1 C 0 I 36 s aotNan1.NW_018500483v1 2622310 282 + 11732439 GACCAGGTAGCTGCTTGGGACTGGAGGC---TGTGTGTACTCAGAAGCGGAGGCAGTCTCTGAGCTCACAGGCTCACAGCAGGGGTGCGGGCAGACAGCGCCCTGGGCCCCGGACGAGG-----------AGGGAAGAAGGTGAG-CGTGATTAAGGGGCTCTGGGGG-TGTGAATGGGTTGCTGCAAGGTGGAAAGGAGGCAGGGAACATCTTCCCAGATGAACGGAGAA--GCAGGTGGAAGGCCCAGGCAAGGGGCA-TGAGGC-TGGAGG-CCCGCGGCTTGGCTGG-GGGCAGTGCCAG--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22786975 236 + 22939663 GGCCAGGTGGCCTCTTGAGACTGGAAGC---CGTATTTACTCAGAAGTAGA-------CAGGAGATCGCAGGCTTGCAGCTATAGTGGAAACAGACATC----------CTGGAAGAGG-----------AAGGAGGAGCATGAG-AGTCATCTCT-GGCTGGGGGGAGTGTGGATGGGTTGGTGCAAAGTGGAAGTGAGTCAGGGAATATCAT-CCACCTGAAGGG---AATGCACATGG-AGGCTGAGGCAAGAGGCAGTAAGGGCAGAGAG--------------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47559488 256 + 47698779 -GCCAGGTGGCCATTGCGGACCAAAGGTGAATGTATTTACCTGCAAGCCGGTGACGTCTCCGTGGTCAGAGCCCACAGTCTGGGG----GACAGACAGG---------GCTGGGAGACGTGTCAGTGGCCCAGGAAGGAAATGAGCAGCGAGGA----------GGGAGTCTGGAGGCGCTGATGT---GGGAGGAGCAGGTGCGGAGGGCCACGCCCGGGAAGGCC---G--GCAGG----------GGCCAGCGGGCA-GG-----TGTGGG---TGTGGCTGGGTGGGCGGAGGGCCCCAGGGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e mm10.chr2 181738341 7856 + 182113224 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I a score=-48609.000000 s hg38.chr20_KI270870v1_alt 49451 20 + 183433 CCCC-----GCTCCTACCTGTTCAG s panTro5.chr20 66374510 20 + 66533130 CCCC-----ACTCCTACCTGTTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055261 20 + 62195757 CCCC-----GCTCCTACCTGTTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440623 20 - 578057 CCCC-----GCTCCTACCTGTTCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967179 20 - 110113093 CCCC-----ACTCCTACCTGTTCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92694967 2 - 92844088 CC----------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362323 2 + 96509753 CC----------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832173 2 - 16982598 CC----------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635189 2 - 3785965 CC----------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256911 2 - 90373283 CC----------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14073 2 - 179258 CC----------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507955 20 - 5823884 CCCC-----GCGGCTGCCTGCGAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160266 19 + 159171411 -CCC-----CCTCCTGCCTGTGGAC i calJac3.chr5 C 0 I 14 s saiBol1.JH378156 16225740 19 + 16356641 -CCC-----GCTCCTGCCTGGGGAG i saiBol1.JH378156 C 0 I 13 s aotNan1.NW_018500483v1 2622592 19 + 11732439 -CCC-----GCTCCTGCCTGCGGAG i aotNan1.NW_018500483v1 C 0 I 24 s otoGar3.GL873542 22787211 19 + 22939663 ---TGTG--GCCCCTGCCTTTGGG- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47559744 19 + 47698779 -----CACTGTTCCTTCTCCTCAG- i canFam3.chr24 C 0 I 10 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e mm10.chr2 181738341 7856 + 182113224 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e cebCap1.NW_016107870v1 1091004 36 + 1231380 I a score=16272.000000 s hg38.chr20_KI270870v1_alt 49471 5 + 183433 CCTCC s panTro5.chr20 66374530 5 + 66533130 CCTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055281 5 + 62195757 CCTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440643 5 - 578057 CCTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967199 5 - 110113093 CCTCC i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012114444v1 5507975 5 - 5823884 CCTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160299 5 + 159171411 CCTGC i calJac3.chr5 I 14 C 0 s saiBol1.JH378156 16225772 5 + 16356641 CCCGC i saiBol1.JH378156 I 13 C 0 s otoGar3.GL873542 22787230 5 + 22939663 CCTCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47559773 5 + 47698779 CCTGC i canFam3.chr24 I 10 C 0 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e cerAty1.NW_012001373v1 3635191 0 - 3785965 C e chlSab2.chr2 90256913 0 - 90373283 C e mm10.chr2 181738341 7856 + 182113224 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e manLeu1.NW_012101652v1 14075 0 - 179258 C e macNem1.NW_012014244v1 16832175 0 - 16982598 C e cebCap1.NW_016107870v1 1091004 36 + 1231380 I e aotNan1.NW_018500483v1 2622611 24 + 11732439 I e rheMac8.chr10 92694969 0 - 92844088 C e macFas5.chr10 96362325 0 + 96509753 C a score=227176.000000 s hg38.chr20_KI270870v1_alt 49476 29 + 183433 CCGCTGCAGCTCTT--------CCCTCTTTCCTTCAC s panTro5.chr20 66374535 29 + 66533130 CCGCTGCAGCTCTT--------CCCTCTTTCCTTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055286 29 + 62195757 CCGCTGCAGCTCTT--------CCCTCTTTCCTTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440648 29 - 578057 CCGCTGCAGCTCTT--------CCCTCTTTCCTTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967204 29 - 110113093 CCGCTGCAGCTCTT--------CCCTCTTTCCTTCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92694969 29 - 92844088 CTGCTGCAGCTCTT--------CCCTCTTCCCTTCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362325 29 + 96509753 CTGCTGCAGCTCTT--------CCCTCTTCCCTTCAC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3635191 29 - 3785965 CCGCTGCAGCTCTT--------CCCTCTTCCCTTCAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256913 29 - 90373283 CCACTGCAGCTCTT--------CCCTCTTCCCTTCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14075 29 - 179258 CCGCTGCAGCTCTT--------CCCTCTTCCCTTCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5507980 29 - 5823884 CCGCTGCAGCTCTT--------CCCTCTTTGCTGCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160304 29 + 159171411 CCACTGCAGCTCTT--------CCTTCTTTACTTTTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225777 29 + 16356641 CCACGGCAGCTCTT--------CCTTCTTTCCCTCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091040 29 + 1231380 CCACTGCAGCTCTT--------CCTTCTTTCCCTCAT i cebCap1.NW_016107870v1 I 36 C 0 s otoGar3.GL873542 22787235 29 + 22939663 TCACTGCAGCTGTG--------CACTTTTCCCCTCAC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47559778 31 + 47698779 ---CCGCGGGCCTCAAACATCACCTTCTGTCGTA--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e mm10.chr2 181738341 7856 + 182113224 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e macNem1.NW_012014244v1 16832175 0 - 16982598 C e aotNan1.NW_018500483v1 2622611 24 + 11732439 I a score=447768.000000 s hg38.chr20_KI270870v1_alt 49505 44 + 183433 GGAGTCCTGCTCTTTGGACTTA--ACACACTCAGGAGTCTGTTGTT s panTro5.chr20 66374564 44 + 66533130 GGAGTCCTGCCCTTTGGACTTA--ACACACTCAGGAGTCTGTTGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055315 44 + 62195757 GGAGTCCTGCCCTTTGGACTTA--ACACACTCAGGAGTCTGTTGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440677 44 - 578057 GGAGTCCTGCTCTTTGGACTTA--ACACACTCAGGAGTCTGTTGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967233 46 - 110113093 GAAGTCCTGCTCTTTGGACTTAAGACACACTCAGGAGTCTGTTGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92694998 46 - 92844088 GGAGTCTTGCTCTTTGAACTTAAGACATACTCAGGAGTCTGTTGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362354 46 + 96509753 GGAGTCTTGCTCCTTGAACTTAAGACATACTCAGGAGTCTGTTGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832175 41 - 16982598 -----CTTGCTCTTTGAACTTAAGACATACTCAGGAGTCTGTTGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635220 46 - 3785965 GGAGTCTTGCTCTTTGAACTTAAGACATACTCAGGAGTCTGTTGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256942 46 - 90373283 GGAGTCTTGCTCTTTGAACTTAAGACATACTCAGGAGTCTGTTGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14104 46 - 179258 GGAGTCTTGCTCTTTGAACTTAAGACATACTCAGGAGTCTGTTGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508009 46 - 5823884 GGAGTCTTGCTCTCTGAACTTAAGACACACTCAGGAGTCTGTTGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160333 46 + 159171411 TGAGCCCTGCTCTTTGGACTTAAGACACACTCAGGAGTCTGTTGTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225806 46 + 16356641 GGAGCCCTGCTGTTTGGACTCAAGACACACTCAGGAGTCTGTTGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091069 46 + 1231380 GGAGCCCTGCTTTTTGGACTTAAGACACACTCAGGAGTCTGTTGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2622635 46 + 11732439 GCAGCCCTGCTCTTTGGACTTCAGACACAGTCAGGAGTCTGTTGTT i aotNan1.NW_018500483v1 I 24 C 0 s otoGar3.GL873542 22787264 45 + 22939663 -TCTCCTTGCCCTTTGGACTTCAAGCACATTCAGAAATCTGTTGTT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47559809 38 + 47698779 GGAAACCCACTC--TGCACCTG--TCCCTTCCTGCGGCCTGG---- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e mm10.chr2 181738341 7856 + 182113224 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I a score=1595682.000000 s hg38.chr20_KI270870v1_alt 49549 181 + 183433 AAAAAACAAACCAAAGG-CT----CTCTTAGCCTCGACCCCATCACAGCCAAGTTCTG----GAGAGCTCTCTGC-----TCCATCTCCTCTTGTCTCCCCCTCCTCCTCCCTCTCCACTTCTGCGTGTCC------------CGGAGAGACAGAGACCCCCAGGCACCCTTGGCTG-----GTGGGAGAGACAGCACAAACATGAACGGCT s panTro5.chr20 66374608 181 + 66533130 AAAAAACAAACCAAAGG-CT----CTCTTAGCCTCGACCCCATCACAGCCAAGTTCTG----GAGAGCTCTCTGC-----TCCATCTCCTCTTGTCTCCCCCTCCTCCTCCCTCTCCACTTCTGCGTGTCC------------TGGAGAGACAGAGACCCCCAGGCACCCTTGGCTG-----GTGGGAGAGACAGCACAAACATGAACGGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055359 181 + 62195757 AAAAAACAAACCAAAGG-CT----CTCTTAGCCTCAACCCCATCACAGCCAAGTTCTG----GAGAGCTCTCTGC-----TCCATCTCCTCTCGTCTCCCCCTCCTCCTCCCTCTCCACTTCTGCGTGTCC------------CGGAGAGACAGAGACCCCCAGGCACCCTTGGCTG-----GTGGGAGAGACAGCACAAACATGAACGGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440721 180 - 578057 AAAAAACAAACCAAAGG-CT----CTCTCAGCCTCGA-CCCATCACAGCCAAGTTCTG----GAGAGctctctgc-----tccatctcctcttgtctccccctcctcctccctctccACTTCTGCGTGTCC------------CGGAGAGACAGAGACCCCCAGGCACCCTTGGCTG-----GTGGGAGAGACAGCACAAACATGAACCGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967279 181 - 110113093 AAAAAACAAACCAAAGG-CT----CTCTCAGCCTCGACCCCATCCTAGCCAAGTTCTG----GAGAActctctgc-----tccgtctcctcttgtctccccctcctcctccctctccACCTCTGCATGTCC------------TGGAGAGACAGAGACCCCCAGGCACCCCTGGCTG-----GTGGGAGAGGCAGCACAAACATGAACGGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695044 180 - 92844088 CAAAAACAAACCAGAGG-CT----CTCTCGGCCTCTGCCCCATCACAGCCAAGTTCTG----GAGAGCTctctgc-----tctgtctcctcttgtctccccctcctccttcctctccacctcTGCATGTCC------------CAGAGAGACAGAGACCCCCAGGCACCCT-GGCTG-----GTGGGAGAGGCAGCACAAACATGAACGGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362400 178 + 96509753 CAAAAACAAACCAGAGG-CT----CTCTCGGCCTCTGCCCCATCACAGCCAAGTTCTG----GAGAGCTctctgc-----tctgtctcctcttgtctccccctcctccttcctctccacctcTGCATGTCC------------CAGAGAGAC--AGACCCCCAGGCACCCT-GGCTG-----GTGGGAGAGGCAGCACAAACATGAACGGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832216 177 - 16982598 CAAAAACAAACCAGAGG-CT----CTCTCGGCCTCTGCCCCATCACAGCCAAGTTCTG----GAGAGCTCTCTGC-----TCTGT---CTCTTGTCTCCCCCTCCTCCTTCCTCTCCACCTCTGCATGTCC------------CAGAGAGACAGAGACGCCCAGGCACCCT-GGCTG-----GTGGGAGAGGCAGCACAAACATGAACGGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635266 180 - 3785965 CAAAAACAAACCAAAGG-CT----CTCTCGGCCTCTGCCCCATCACAGCTAAGTTCTG----GAGAgctctctgc-----tctgtgtcctcctgtctccccctcctccttcctctccacctcTGCATGTCC------------CAGAGAGACAGAGACCCCCAGGCACCCC-GGCTG-----GTGGGAGAGGCAGCACAAACATGAACGGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90256988 180 - 90373283 CAAAAACAAACCAAAGG-CT----CTCTCAGCCTCTGCCCCATCACAGCCAAGTTGTG----GAGAGCTctctgc-----tctgtctcctcttgtctccccctcctccttcctctccacctcTGCATGTCC------------CAGAGAGACAGAGACCCCCAGGCACCCC-GGCTG-----GTGGGAGAGGCAGCACAAACATGAACGGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14150 180 - 179258 CAAAAACAAACCAAAGG-CG----CTCTCGGCCTCTGCCCCATCACAGCCAAGTTCTG----GAGAGCTctctgc-----tctgtctcctcttgtctccccctcctccttcctctccacctcTGCATGTCC------------CAGAGAGACAGAGACCCCCAGGCACCCC-GGCTG-----GTGGGAGAGGCAGCACAAACATGAACGGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508055 178 - 5823884 CAAAAACAAACCAAAGG-CT----CTCTCAGCCTCTGCCTCATCACAGCCAAGTTCTG----GAGAGCTCTCTGC-----TCTGTCTTCTCTTGTCTCCCCCTCCTCCTTCCTCTCCACCTCTGCATGTCC------------CAGAGAGACAGAGACGCCCAGGCACCCC-GGCTG-----GTGG--GAGGCAGCACAAACATGAACGGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160379 180 + 159171411 AAAAAACAAACCAAACA-CT----CTCTCAGCCTCCGCCCCGTCACAGCCAAGTTCTGG--AGAGAG--CTCTGC-----TCCATCTCCTCTCGTCTCCTTCTCTTCCTCCTTCT-CCCCTCTGCGTGTCC------------CAGAGAGACAGAGACCCCCAGGCACCCCTGGCTG-----GTGGGAGAGGCAGCACAAACATGAACGGCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16225852 163 + 16356641 AAAAAACAAACCAAAGG-CT----TTCTCAGCCTCCGCCCCGTCACAGCCAAGTTCTGG--AGAGAGCTCTCTGC-----TCCATCTC-------------CTCTTCCTC------CACCTCTGCGTGTCC------------CAGAGAGACAGAGACCCCCAGGCACCCCTGGCTG-----GTGGGAGA-GCAGCACAAACATGAGCGGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091115 170 + 1231380 AAAAAACAAACCAAAGG-CT----CTCTCAGCCTCTGCCCCGTCACAGCCAAGTTCTGG--AGAGAGctctctgc-----tccatctc-------------ctcttcctccttctccacctcTGCGTGTCC------------CAGAGAGACAGAGACCCCCAGGCACCCCTGGCTG-----GTGGGAGAGGCAGCACAAACATGAACGGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2622681 179 + 11732439 AAAAGACAAACCGAGGA-CT----CTCTCAGCCTCCGCCCCATCACAGCCACGTTCTGG--AGAGAGCTCcctgc-----tccgtctc---ctgtctcctcctcttcctccttctccacctccGCGTGTCC------------CAGAGAGACAGAGACCCCCAGGCACCCCCGGCTG-----GTGGGAGA-GCAGCGCAAATGTGAACGGCT i aotNan1.NW_018500483v1 C 0 I 60 s otoGar3.GL873542 22787309 120 + 22939663 AAAAAACAAACCACAGGCCT----CTCTTGTCCTCTTCCTCCTC-----------------------------------------------------------CCTCCACCCTCCCCTCTCCAGAGCAGCC------------CTGGAGGTGGGAG------AGGCA-----GACAG-----GAGTCAGAAG-AGCCAAGATGTGCTCTGCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181746197 130 + 182113224 AACAAAAAAATTAAAAG-GT----CTTT-----TTCACTTTGCCATAACTGAGATCTGATCAAAGAGCCCTATG----------------------------TCTTCTTTCCTTTCCA-TTCTCTGTGCCT------------TGAA------------------TACTTCTGCTTG-----GTGTGAGAGA------AAACATATGTGG-- i mm10.chr2 I 7856 C 0 s canFam3.chr24 47559847 178 + 47698779 ------------AGGGG-CTGCTCCTCTGAGGTCTT---CCGTCAGCGCCCGGCCCTG-------------CTGCCACCGTCCGCCTCCACTGTCCACCACCCCCCGGCCACTGGCCACCGCGCCCCGGccaccatccaccatccaccatccacTGTCTGGCAGGCAC----GGCTGCCCTAGTGGGACAGA-GACACAAACAAGAGCTCGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I a score=640018.000000 s hg38.chr20_KI270870v1_alt 49730 85 + 183433 CACGGGCCGCACATAGTTGCCTTCACTGCGGGGCGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC s panTro5.chr20 66374789 85 + 66533130 CACGGGCCGCACATAGTTGCCTTCACTGCGGGGCGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055540 85 + 62195757 CATGGGCCGCACATAGTTGCCTTCACTGCGGGGCGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440901 85 - 578057 CACGGGCCGCACATAGTTGCCTTCACTGCGGGGCGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967460 85 - 110113093 CACAGGCCCCATGTCATTGCCTTCACTGTGGGGCGCG-AAACAGCTGTGTGGAACCA-GCCCAGG--CC-CTGAGGGGTGCTTTCCTCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695224 85 - 92844088 CACAGGTGCCACGTAGTTGCCTTCAGAGAGGGGCGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362578 85 + 96509753 CACAGGTGCCACGTAGTTGCCTTCAGAGAGGGGTGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832393 85 - 16982598 CACAGGTGCCACGTAGTTGCCTTCAGAGAGGGGCGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635446 85 - 3785965 CACAGGTGTCACGTAGTTGCCTTCAGAGAGGGGCGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257168 85 - 90373283 CACAGGTGCCACGAAGTTGCCTTCAGAGAGGGGCGAG-ACACAGCTGTGTGGAACTG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14330 85 - 179258 CACAGGTGCCACGTAGTTGCCTTCAGAGAGGGGCGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508233 85 - 5823884 CACAGGTGCCACGTAGTTGCCTTCAGAGTGGGGCGAG-ACACAGCTGTGTGGAACCG-GCCCAGG--CC-CTGAGAGGTGCTTTCCTCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160559 80 + 159171411 TGCAGGC--CACGTAGCTGCCTTCAGTG-GGGGCGAG-ACACAGCCGTGTGGGGCTG-GCCCCAG--GC-CTGA--GGTGCTTTCCTCCC i calJac3.chr5 C 0 I 2 s saiBol1.JH378156 16226015 80 + 16356641 TGCAGGC--CACGTAGCTGCCTTCAGTG-GGGGCGAG-ACACAGCTGCGTGGGGCCG-GCCCCAG--GC-CTGA--GATGCTTTCTTCCC i saiBol1.JH378156 C 0 I 2 s cebCap1.NW_016107870v1 1091285 80 + 1231380 TGCAGGC--CACATAGCTGCCTTCAGTG-GGGGCGAG-ACACAGCCGTGCGGGGCCG-GCCCCAG--GC-CTGA--GGTGCTTTCCTCCC i cebCap1.NW_016107870v1 C 0 I 2 s otoGar3.GL873542 22787429 74 + 22939663 --CAGCTGC--TGTGGGTGTCATCCATGGG-----------CAGTTGTGTGGACATGCGCTTAAGGACC-CTACAAAGTGCTTTTCTTTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181746327 66 + 182113224 -GTAGGTGCTTCA-----GCTTCCAGAGAGATATGTG-G-ACAGATATGTGAAA----TGCCAGG--CC-TGGG--GATTCTT------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47560025 74 + 47698779 ------------CCAGCAGCCTT--GTGTGGGGTGTGTACACAGCCACGTGCAATCACACCCATG--ACACCAAAAGGTGCTTTTCCTTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e aotNan1.NW_018500483v1 2622860 60 + 11732439 I a score=239038.000000 s hg38.chr20_KI270870v1_alt 49815 24 + 183433 C-T--GTTTTCCAAGTTGGCAGTGCTA s panTro5.chr20 66374874 26 + 66533130 C-TCTGTTTTCCAAGTTGGCAACGCTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055625 26 + 62195757 C-TCTGTTTTCCAAGTTGGCAACGCTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 440986 26 - 578057 C-TCTGTTTTCCAAGTTGGCAACGCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967545 26 - 110113093 C-TCTGTTTTCCAAGTTGGCAACGCTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695309 27 - 92844088 CTTTTTTTTTCCAAGTTGGCAATGCTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362663 27 + 96509753 CTTTTTTTTTCCAAGTTGGCAATGCTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832478 27 - 16982598 CTTTTTTTTTCCAAGTTGGCAATGCTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635531 27 - 3785965 CTTTTTTTTTCCAAGTTGGCAACGCTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257253 27 - 90373283 CTTTTTTTTTCCAAGTTGGCAACGCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14415 27 - 179258 CTTTTTTTTTCCAAGTTGGCAACGCTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508318 26 - 5823884 C-TCTGTTTTCCAAGTTGGCAACGCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160641 24 + 159171411 ---CTGTTTTCCAAGTTGGCAGTGCTA i calJac3.chr5 I 2 C 0 s saiBol1.JH378156 16226097 24 + 16356641 ---CTGTTTTCCAAGTCGGCAGCGCTA i saiBol1.JH378156 I 2 C 0 s cebCap1.NW_016107870v1 1091367 20 + 1231380 ---CTGTTTTCCAA----GCAGCGCTA i cebCap1.NW_016107870v1 I 2 C 0 s aotNan1.NW_018500483v1 2622920 24 + 11732439 ---CTGTTTCCCAAGTCGGCAGTGTTA i aotNan1.NW_018500483v1 I 60 C 0 s otoGar3.GL873542 22787503 24 + 22939663 ---CTATTTTCTAGCTTGGTAATGCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181746393 24 + 182113224 ---CTGTTTTCTAAGTTTGCAACATTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47560099 24 + 47698779 ---TTAGTTTCCAGGTTGGAAACATCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1808641 507 - 2029793 I e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I a score=112598.000000 s hg38.chr20_KI270870v1_alt 49839 8 + 183433 CCCTATTT s panTro5.chr20 66374900 8 + 66533130 CCCTATTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055651 8 + 62195757 CCCTATTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441012 8 - 578057 CCCTATTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967571 8 - 110113093 CCCTATTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695336 8 - 92844088 CCCTATTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362690 8 + 96509753 CCCTATTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832505 8 - 16982598 CCCTATTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635558 8 - 3785965 CCCTATTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257280 8 - 90373283 CCCTATTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14442 8 - 179258 CCCTATTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508344 8 - 5823884 CCCTATTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160665 8 + 159171411 CCCTATTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226121 8 + 16356641 CCCTGTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091387 8 + 1231380 CCTTATTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2622944 8 + 11732439 CCCTATTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1809148 8 - 2029793 CCCTATTC i proCoq1.NW_012150197v1 I 507 C 0 s otoGar3.GL873542 22787527 8 + 22939663 TCCTCTTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181746417 8 + 182113224 CCTTGTCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47560123 8 + 47698779 CCCTTTTC i canFam3.chr24 C 0 C 0 e micMur3.chr18 56801888 587 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I a score=270204.000000 s hg38.chr20_KI270870v1_alt 49847 20 + 183433 CTTCTATGATGAAAAGGAAC s panTro5.chr20 66374908 20 + 66533130 CTTCTATGATGAAAAGGAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055659 20 + 62195757 CTTCTATGATGAAAAGGAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441020 20 - 578057 CTTCTATGATGAAAAGGAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967579 20 - 110113093 CTTCTATGATGAAAAGGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695344 20 - 92844088 CTTCTATGAGGAAAAGGAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362698 20 + 96509753 CTTCTATGAGGAAAAGGAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832513 19 - 16982598 CTTCTATGAGG-AAAGGAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635566 20 - 3785965 CTTCTATGAGGAAAAGGAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257288 20 - 90373283 CTTCTATGAGGAAAAGGAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14450 20 - 179258 CTTCTATGAGGAAAAGGAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508352 20 - 5823884 CTTCTATGAGGAAAAGGAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160673 20 + 159171411 CTTGCATGATGAAAAGGAAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226129 19 + 16356641 CTTCCGTGATG-GAAGGAAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091395 20 + 1231380 CTTCCATGATGAAAAGGAAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2622952 20 + 11732439 CCTCCATGATGAAAAGGAAC i aotNan1.NW_018500483v1 C 0 I 13 s micMur3.chr18 56802475 20 + 57149010 CTTCCATGATGAAAAGGAAT i micMur3.chr18 I 587 C 0 s proCoq1.NW_012150197v1 1809156 20 - 2029793 CTTCTGTGATGAAAAGGAAT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22787535 19 + 22939663 CTTCTATGAT-AAAAACATT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181746425 20 + 182113224 CCTTGATGATACAAACAAAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47560131 20 + 47698779 CTTCTGTGATGAAAAGGATT i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 193265 997 - 397369 I a score=312148.000000 s hg38.chr20_KI270870v1_alt 49867 27 + 183433 TCTAA-AAGCATTCAAAACATTTAAAAA s panTro5.chr20 66374928 27 + 66533130 TCTAA-AAGCATTCAAAACATTTAAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055679 27 + 62195757 TCTAA-AAGCATTCAAAACATTTAAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441040 27 - 578057 TCTAA-AAGCATTCAAAACATTTAAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967599 27 - 110113093 TCTAA-AAGCATTCAAAACACTTAAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695364 27 - 92844088 TCTAA-AAGCATTCAAAACGTTGAAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362718 27 + 96509753 TCTAA-AAGCATTCAAAACGTTGAAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832532 27 - 16982598 TCTGA-AAGCATTCAAAACGTTGAAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635586 27 - 3785965 TCTAA-AAGCATTCAAAACGTTGAAAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257308 27 - 90373283 TCTAA-AAGCATTTGAAACGTTTAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14470 27 - 179258 TCTAA-AAGCATTCAAAACGTTGAAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508372 27 - 5823884 TCTAA-AAGCATTCAAAACATTTAAAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160693 27 + 159171411 TCTAA-AAGCATTCAAAACATTTTAAAT i calJac3.chr5 C 0 I 6 s saiBol1.JH378156 16226148 27 + 16356641 TCTAA-AAGCATTCAAAACACTTTAAAT i saiBol1.JH378156 C 0 I 6 s cebCap1.NW_016107870v1 1091415 27 + 1231380 TGTAA-AAGCATTCAAAACATTTGAAAT i cebCap1.NW_016107870v1 C 0 I 6 s micMur3.chr18 56802495 27 + 57149010 TCTAG-AAACACTCAAGACATTTAAAAA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1809176 27 - 2029793 TCCAA-AAACACTCGCAACATCTAAAGA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22787554 27 + 22939663 TCTAA-AAAACCTCAAAACATTTTAAAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181746445 27 + 182113224 TCTGA-AAATATTTAAAACACTTAAAAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47560151 18 + 47698779 -CTAAGGAGCACCCAACAC--------- i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 193265 997 - 397369 I e aotNan1.NW_018500483v1 2622972 13 + 11732439 I a score=86822.000000 s hg38.chr20_KI270870v1_alt 49894 6 + 183433 GTGTGT s panTro5.chr20 66374955 6 + 66533130 GTGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055706 6 + 62195757 GTGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441067 6 - 578057 GTGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967626 6 - 110113093 GTGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695391 6 - 92844088 GTGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362745 6 + 96509753 GTGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832559 6 - 16982598 GTGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635613 6 - 3785965 GTGTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257335 6 - 90373283 GTGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14497 6 - 179258 GTGTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508399 6 - 5823884 GTGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160726 6 + 159171411 ATGTGC i calJac3.chr5 I 6 C 0 s saiBol1.JH378156 16226181 6 + 16356641 ATGTGT i saiBol1.JH378156 I 6 C 0 s cebCap1.NW_016107870v1 1091448 6 + 1231380 ATGTGC i cebCap1.NW_016107870v1 I 6 C 0 s aotNan1.NW_018500483v1 2622985 6 + 11732439 GTGTGC i aotNan1.NW_018500483v1 I 13 C 0 s micMur3.chr18 56802522 6 + 57149010 GTGTGT i micMur3.chr18 C 0 I 1899 s proCoq1.NW_012150197v1 1809203 6 - 2029793 GTGTGT i proCoq1.NW_012150197v1 C 0 I 1849 s otoGar3.GL873542 22787581 6 + 22939663 GTGTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181746472 2 + 182113224 ----GT i mm10.chr2 C 0 I 4 e canFam3.chr24 47560169 0 + 47698779 C e dasNov3.JH569290 193265 997 - 397369 I a score=143227.000000 s hg38.chr20_KI270870v1_alt 49900 14 + 183433 GTAAG-AAGTGTTTT s panTro5.chr20 66374961 14 + 66533130 GTAAG-AAGTGTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055712 14 + 62195757 GTAAG-AAGTGTTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441073 14 - 578057 GTAGG-AAGTGTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967632 14 - 110113093 GTAAG-AAGTGTTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695397 14 - 92844088 GTAAC-AAGTGTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362751 14 + 96509753 GTAAC-AAGTGTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832565 14 - 16982598 GTAAC-AAGTGTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635619 14 - 3785965 GTAAC-AAGTGTTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257341 14 - 90373283 GTAAC-AAGTGTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14503 14 - 179258 GTAAC-AAGTGTTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508405 14 - 5823884 GTAAC-AAGTGTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160732 14 + 159171411 ATAAG-AAGTGTTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226187 14 + 16356641 GTAAG-AAGTGTTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091454 14 + 1231380 GTAAG-AAGTGTCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2622991 14 + 11732439 GTAAG-AAGTGTTTT i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181746478 14 + 182113224 -CAACTGAGTGTTTT i mm10.chr2 I 4 I 38 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560169 0 + 47698779 C e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e otoGar3.GL873542 22787587 0 + 22939663 C a score=332335.000000 s hg38.chr20_KI270870v1_alt 49914 37 + 183433 CATCCCTGCATAGATTACCTCCAGTGAAAAATCAGCT s panTro5.chr20 66374975 37 + 66533130 CATCCCTGCATAGATTACCTCCAGTGAAAAATCAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055726 37 + 62195757 CATCCCTGCATAGATTACCTCCAGTGAAAAATCAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441087 37 - 578057 CATCCCTGCATAGATTACCTCCAGTGAAAAATCAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967646 37 - 110113093 CATCCCTGCATAGATTACCTCCAATGAATAATCAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695411 37 - 92844088 CATCCCTGCACAGATTACCTCCAATGAATAATCAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362765 37 + 96509753 CATCCCTGCACAGATTACCTCCAATGAATAATCAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832579 37 - 16982598 CACCCCTGCACAGATTACCTCCAATGAATAATCAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635633 37 - 3785965 CATCCCTGCACAGATTACCTCCAATGAATAATCAGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257355 37 - 90373283 CATACCTGCACAGATTACCTCCAATGAATAATCAGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14517 37 - 179258 CATCCCTGCACAGATTACCTCCAATGAATAATCAGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508419 37 - 5823884 CATCCCTGCACAGATTACCTCCAATGAATAATCAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160746 37 + 159171411 CATCCCAGCATAGATTACCTCCAGTGAATAATCAGCT i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16226201 37 + 16356641 CGTCCCAGCATAGATTACCTCCAGTGAATAATCAGCT i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1091468 37 + 1231380 TGTCCCAGCATAGATTACCTCCAGTGAATAATCAGCT i cebCap1.NW_016107870v1 C 0 I 106 s aotNan1.NW_018500483v1 2623005 36 + 11732439 CAT-CCAGCACAGATCACCTCCAGTGCACAATCAGCT i aotNan1.NW_018500483v1 C 0 I 35 s otoGar3.GL873542 22787587 6 + 22939663 ------------------------------AGCAGC- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47560169 20 + 47698779 --------------TGGTCTCAAGTGAGAGGCAA--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I a score=-2279.000000 s hg38.chr20_KI270870v1_alt 49951 4 + 183433 ATG-C s panTro5.chr20 66375012 5 + 66533130 ATGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055763 5 + 62195757 ATGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441124 5 - 578057 ATGcc i gorGor5.CYUI01015848v1 C 0 I 5 s nomLeu3.chr13 109967683 5 - 110113093 ATGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695448 4 - 92844088 ATGC- i rheMac8.chr10 C 0 I 10 s macFas5.chr10 96362802 4 + 96509753 ATGC- i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16832616 4 - 16982598 ATGC- i macNem1.NW_012014244v1 C 0 I 10 s cerAty1.NW_012001373v1 3635670 4 - 3785965 ATGC- i cerAty1.NW_012001373v1 C 0 I 10 s chlSab2.chr2 90257392 4 - 90373283 ATGC- i chlSab2.chr2 C 0 I 10 s manLeu1.NW_012101652v1 14554 4 - 179258 ATGC- i manLeu1.NW_012101652v1 C 0 I 10 s colAng1.NW_012114444v1 5508456 4 - 5823884 ATGC- i colAng1.NW_012114444v1 C 0 I 2 s calJac3.chr5 58160784 4 + 159171411 TAGC- i calJac3.chr5 I 1 I 1 s saiBol1.JH378156 16226239 4 + 16356641 GAGC- i saiBol1.JH378156 I 1 I 1 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560189 0 + 47698779 C e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e otoGar3.GL873542 22787593 0 + 22939663 C a score=-15871.000000 s hg38.chr20_KI270870v1_alt 49955 17 + 183433 TCCCCCC--CTGCCACTTA s panTro5.chr20 66375017 17 + 66533130 CCCCCCC--CCGCCACTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055768 17 + 62195757 CCCCCCG--CCACCACTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441134 17 - 578057 ccccccc--cccccACTTA i gorGor5.CYUI01015848v1 I 5 C 0 s nomLeu3.chr13 109967688 11 - 110113093 CCCCCCT--------CTTA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96362808 9 + 96509753 TCCCTCTTA---------- i macFas5.chr10 I 2 I 3 s colAng1.NW_012114444v1 5508462 7 - 5823884 CCCCTCT------------ i colAng1.NW_012114444v1 I 2 C 0 s calJac3.chr5 58160789 7 + 159171411 CCTCTTC------------ i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16226244 7 + 16356641 CCTCTTC------------ i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22787593 1 + 22939663 ------------------A i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47560189 2 + 47698779 ---CG-------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e cerAty1.NW_012001373v1 3635674 10 - 3785965 I e chlSab2.chr2 90257396 10 - 90373283 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e manLeu1.NW_012101652v1 14558 10 - 179258 I e macNem1.NW_012014244v1 16832620 10 - 16982598 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e rheMac8.chr10 92695452 10 - 92844088 I a score=32681.000000 s hg38.chr20_KI270870v1_alt 49972 16 + 183433 AAGTGCTGTGAAGCTG-- s panTro5.chr20 66375034 16 + 66533130 AAGTGCTGTGAAGCTG-- i panTro5.chr20 C 0 I 3 s panPan2.chr20 62055785 16 + 62195757 AAGTGCTGTGAAGCTG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441151 16 - 578057 AAGTGCTGTGAAGCTG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967699 16 - 110113093 AAGTGCTGTGAAGCTG-- i nomLeu3.chr13 C 0 I 3 s calJac3.chr5 58160796 15 + 159171411 AAGTGCTG-GAAGCTG-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226251 15 + 16356641 AAGTGCTG-GAAGCCG-- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22787594 16 + 22939663 AAGTGCTGTGAGGCTG-- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47560191 18 + 47698779 AGGTGTCGGGGGGCACGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e cerAty1.NW_012001373v1 3635674 10 - 3785965 I e colAng1.NW_012114444v1 5508469 0 - 5823884 C e chlSab2.chr2 90257396 10 - 90373283 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e manLeu1.NW_012101652v1 14558 10 - 179258 I e macNem1.NW_012014244v1 16832620 10 - 16982598 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e rheMac8.chr10 92695452 10 - 92844088 I e macFas5.chr10 96362817 3 + 96509753 I a score=2145.000000 s hg38.chr20_KI270870v1_alt 49988 3 + 183433 TTG s panPan2.chr20 62055801 3 + 62195757 CTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441167 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chr5 58160811 3 + 159171411 CTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226266 3 + 16356641 CTG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22787610 2 + 22939663 CT- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47560209 3 + 47698779 CTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e cerAty1.NW_012001373v1 3635674 10 - 3785965 I e colAng1.NW_012114444v1 5508469 0 - 5823884 C e chlSab2.chr2 90257396 10 - 90373283 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e manLeu1.NW_012101652v1 14558 10 - 179258 I e macNem1.NW_012014244v1 16832620 10 - 16982598 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e panTro5.chr20 66375050 3 + 66533130 I e nomLeu3.chr13 109967715 3 - 110113093 I e rheMac8.chr10 92695452 10 - 92844088 I e macFas5.chr10 96362817 3 + 96509753 I a score=310.000000 s hg38.chr20_KI270870v1_alt 49991 9 + 183433 CAGGGAGGG s panTro5.chr20 66375053 9 + 66533130 CAGGGGGGG i panTro5.chr20 I 3 C 0 s panPan2.chr20 62055804 9 + 62195757 CAGGGAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441170 9 - 578057 CAGGGAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967718 9 - 110113093 CAGGGAGGG i nomLeu3.chr13 I 3 C 0 s colAng1.NW_012114444v1 5508469 5 - 5823884 TAGGG---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160814 2 + 159171411 CA------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226269 2 + 16356641 CA------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22787612 3 + 22939663 --GGG---- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47560212 9 + 47698779 CGGGGGGCG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e cerAty1.NW_012001373v1 3635674 10 - 3785965 I e chlSab2.chr2 90257396 10 - 90373283 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e manLeu1.NW_012101652v1 14558 10 - 179258 I e macNem1.NW_012014244v1 16832620 10 - 16982598 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e rheMac8.chr10 92695452 10 - 92844088 I e macFas5.chr10 96362817 3 + 96509753 I a score=22477.000000 s hg38.chr20_KI270870v1_alt 50000 10 + 183433 CCCCGGGTCC s panTro5.chr20 66375062 10 + 66533130 CCCCGGGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055813 10 + 62195757 CCCCGGGTCC i panPan2.chr20 C 0 I 3 s gorGor5.CYUI01015848v1 441179 7 - 578057 CCCCGGG--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967727 10 - 110113093 CCCTGGATCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96362820 10 + 96509753 CCCCGGGTCC i macFas5.chr10 I 3 C 0 s colAng1.NW_012114444v1 5508474 10 - 5823884 CCCCGGGTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160816 6 + 159171411 ----GAGTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226271 6 + 16356641 ----GAGTCC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22787615 10 + 22939663 TCCAGATTCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47560221 10 + 47698779 CGCTGGCTCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e cerAty1.NW_012001373v1 3635674 10 - 3785965 I e chlSab2.chr2 90257396 10 - 90373283 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e manLeu1.NW_012101652v1 14558 10 - 179258 I e macNem1.NW_012014244v1 16832620 10 - 16982598 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e rheMac8.chr10 92695452 10 - 92844088 I a score=4421.000000 s hg38.chr20_KI270870v1_alt 50010 3 + 183433 CAG s panTro5.chr20 66375072 3 + 66533130 CAG i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109967737 3 - 110113093 CAG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96362830 3 + 96509753 CGG i macFas5.chr10 C 0 C 0 s colAng1.NW_012114444v1 5508484 3 - 5823884 CAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160822 3 + 159171411 TGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226277 3 + 16356641 CGG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22787625 2 + 22939663 -AA i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47560231 3 + 47698779 TGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e cerAty1.NW_012001373v1 3635674 10 - 3785965 I e chlSab2.chr2 90257396 10 - 90373283 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e panPan2.chr20 62055823 3 + 62195757 I e gorGor5.CYUI01015848v1 441186 0 - 578057 C e manLeu1.NW_012101652v1 14558 10 - 179258 I e macNem1.NW_012014244v1 16832620 10 - 16982598 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e rheMac8.chr10 92695452 10 - 92844088 I a score=21943.000000 s hg38.chr20_KI270870v1_alt 50013 39 + 183433 GAGGAGGCCAGGGGACCCTCGG--GGAGGGCAGGGA--------AGGTG s panTro5.chr20 66375075 39 + 66533130 GAGGAGGCCAGGGGACCCTCGG--GGAGGGCAGGGA--------AGGTG i panTro5.chr20 C 0 T 64 s panPan2.chr20 62055826 39 + 62195757 GAGGAGGCCAGGGGACCCTCGG--GGAGGGCAGGGA--------AGGTG i panPan2.chr20 I 3 C 0 s nomLeu3.chr13 109967740 39 - 110113093 GAGGAGGCCAGGAGGCCCTCGG--GGAGGGCAGGGA--------AGGTG i nomLeu3.chr13 C 0 T 64 s macFas5.chr10 96362833 39 + 96509753 GAGGAGGCCAGGGGGCGCTCGG--GCAGGGCAGGGA--------AGGTG i macFas5.chr10 C 0 C 0 s colAng1.NW_012114444v1 5508487 17 - 5823884 GAGGAGGCCAGGGGGTG-------------------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160825 14 + 159171411 GAGGAGGCCAGCAG----------------------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226280 14 + 16356641 GAGGAGGCCAGCAG----------------------------------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22787628 46 + 22939663 GAAGAAGCCAGGAG-CCCACCA--GGAGGGTAGGGAGGCATCTGAGGCA i otoGar3.GL873542 I 1 I 4 s canFam3.chr24 47560234 40 + 47698779 GGGGGGG---GTGGACCCTCCGCCGTGGGCCAGGGA---ACCGCAG--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e cerAty1.NW_012001373v1 3635674 10 - 3785965 I e chlSab2.chr2 90257396 10 - 90373283 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e gorGor5.CYUI01015848v1 441186 0 - 578057 C e manLeu1.NW_012101652v1 14558 10 - 179258 I e macNem1.NW_012014244v1 16832620 10 - 16982598 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e rheMac8.chr10 92695452 10 - 92844088 I a score=10236.000000 s hg38.chr20_KI270870v1_alt 50052 7 + 183433 CTGCAGG s panTro5.chr20 66375050 7 + 66533130 CTGCAGG i panTro5.chr20 T 64 C 0 s panPan2.chr20 62055865 7 + 62195757 CTGCAGG i panPan2.chr20 C 0 T 49 s nomLeu3.chr13 109967715 7 - 110113093 CTGCAGG i nomLeu3.chr13 T 64 C 0 s macFas5.chr10 96362872 7 + 96509753 CTGCAGG i macFas5.chr10 C 0 T 62 s otoGar3.GL873542 22787678 7 + 22939663 CTGTGTG i otoGar3.GL873542 I 4 C 0 s canFam3.chr24 47560274 7 + 47698779 CAGCAGG i canFam3.chr24 C 0 I 1 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e cerAty1.NW_012001373v1 3635674 10 - 3785965 I e colAng1.NW_012114444v1 5508504 0 - 5823884 C e chlSab2.chr2 90257396 10 - 90373283 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e gorGor5.CYUI01015848v1 441186 0 - 578057 C e manLeu1.NW_012101652v1 14558 10 - 179258 I e saiBol1.JH378156 16226294 0 + 16356641 C e macNem1.NW_012014244v1 16832620 10 - 16982598 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e calJac3.chr5 58160839 0 + 159171411 C e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e rheMac8.chr10 92695452 10 - 92844088 I a score=1000.000000 s hg38.chr20_KI270870v1_alt 50059 1 + 183433 G s panTro5.chr20 66375057 1 + 66533130 G i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109967722 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s otoGar3.GL873542 22787685 1 + 22939663 G i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47560282 1 + 47698779 G i canFam3.chr24 I 1 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e cerAty1.NW_012001373v1 3635674 10 - 3785965 I e colAng1.NW_012114444v1 5508504 0 - 5823884 C e chlSab2.chr2 90257396 10 - 90373283 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e panPan2.chr20 62055872 49 + 62195757 T e gorGor5.CYUI01015848v1 441186 0 - 578057 C e manLeu1.NW_012101652v1 14558 10 - 179258 I e saiBol1.JH378156 16226294 0 + 16356641 C e macNem1.NW_012014244v1 16832620 10 - 16982598 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e calJac3.chr5 58160839 0 + 159171411 C e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e rheMac8.chr10 92695452 10 - 92844088 I e macFas5.chr10 96362879 62 + 96509753 T a score=2300.000000 s hg38.chr20_KI270870v1_alt 50060 1 + 183433 A s panTro5.chr20 66375058 1 + 66533130 G i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109967723 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695462 1 - 92844088 A i rheMac8.chr10 I 10 C 0 s macNem1.NW_012014244v1 16832630 1 - 16982598 A i macNem1.NW_012014244v1 I 10 C 0 s cerAty1.NW_012001373v1 3635684 1 - 3785965 A i cerAty1.NW_012001373v1 I 10 C 0 s chlSab2.chr2 90257406 1 - 90373283 A i chlSab2.chr2 I 10 C 0 s manLeu1.NW_012101652v1 14568 1 - 179258 A i manLeu1.NW_012101652v1 I 10 C 0 s canFam3.chr24 47560283 1 + 47698779 A i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e colAng1.NW_012114444v1 5508504 0 - 5823884 C e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e panPan2.chr20 62055872 49 + 62195757 T e gorGor5.CYUI01015848v1 441186 0 - 578057 C e saiBol1.JH378156 16226294 0 + 16356641 C e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e calJac3.chr5 58160839 0 + 159171411 C e aotNan1.NW_018500483v1 2623041 35 + 11732439 I e otoGar3.GL873542 22787686 1 + 22939663 I e macFas5.chr10 96362879 62 + 96509753 T a score=40482.000000 s hg38.chr20_KI270870v1_alt 50061 13 + 183433 GGGCCCCG--------GGTCC s panTro5.chr20 66375059 13 + 66533130 GGGCCCCG--------GGTCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441186 3 - 578057 ------------------TCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967724 13 - 110113093 GGGCCCTG--------GATCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695463 13 - 92844088 GGGCCCCG--------GGTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362817 13 + 96509753 GGGCCCCG--------GGTCC i macFas5.chr10 T 62 C 0 s macNem1.NW_012014244v1 16832631 13 - 16982598 GGGCCCCG--------GGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635685 13 - 3785965 GGGCCCCG--------GGTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257407 13 - 90373283 GGGCCCCG--------GGTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14569 13 - 179258 GGGCCCCG--------GGTCC i manLeu1.NW_012101652v1 C 0 C 0 s otoGar3.GL873542 22787687 13 + 22939663 AGGCACGA--------GGCTC i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47560284 21 + 47698779 GGGCAGCGATGGTGCAGGTTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e colAng1.NW_012114444v1 5508504 0 - 5823884 C e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e panPan2.chr20 62055872 49 + 62195757 T e saiBol1.JH378156 16226294 0 + 16356641 C e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e calJac3.chr5 58160839 0 + 159171411 C e aotNan1.NW_018500483v1 2623041 35 + 11732439 I a score=98060.000000 s hg38.chr20_KI270870v1_alt 50074 18 + 183433 --CAGGAGGAGGCCAGGGGA s panTro5.chr20 66375072 18 + 66533130 --CAGGAGGAGGCCAGGGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055823 18 + 62195757 --CAGGAGGAGGCCAGGGGA i panPan2.chr20 T 49 C 0 s gorGor5.CYUI01015848v1 441189 18 - 578057 --CAGGAGGAGGCCAGGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967737 18 - 110113093 --CAGGAGGAGGCCAGGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695476 18 - 92844088 --CGGGAGGAGGCCAGGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362830 18 + 96509753 --CGGGAGGAGGCCAGGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832644 18 - 16982598 --CGGGAGGAGGCCAGGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635698 18 - 3785965 --CGGGAGGAGGCCAGGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257420 18 - 90373283 --CGGGAGGAGGCCAGGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14582 18 - 179258 --CGGGAGGAGGCCAGGGGG i manLeu1.NW_012101652v1 C 0 C 0 s otoGar3.GL873542 22787700 18 + 22939663 --TGGGAGCTGGTCTGTGGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47560305 20 + 47698779 AGGGGTCGGAGCGCAGAGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e colAng1.NW_012114444v1 5508504 0 - 5823884 C e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e saiBol1.JH378156 16226294 0 + 16356641 C e cebCap1.NW_016107870v1 1091505 106 + 1231380 I e calJac3.chr5 58160839 0 + 159171411 C e aotNan1.NW_018500483v1 2623041 35 + 11732439 I a score=145486.000000 s hg38.chr20_KI270870v1_alt 50092 19 + 183433 ----CCCTCGGGGAGGGCAGGGA s panTro5.chr20 66375090 19 + 66533130 ----CCCTCGGGGAGGGCAGGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055841 19 + 62195757 ----CCCTCGGGGAGGGCAGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441207 19 - 578057 ----CCCTCAGGGAGGGCAGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967755 19 - 110113093 ----CCCTCGGGGAGGGCAGGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695494 19 - 92844088 ----CGCTTGGGCAGGGCAGGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362848 19 + 96509753 ----CGCTCGGGCAGGGCAGGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832662 19 - 16982598 ----CGCTCGGGCAGGGCAGGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635716 19 - 3785965 ----CGCTCGGGCAGGGCAGGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257438 19 - 90373283 ----CGCTCGGGCAGGGCAGGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14600 19 - 179258 ----CGCTCGGGCAGGGCAGGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508504 17 - 5823884 ------CTCGGGCAGGGCAGGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160839 19 + 159171411 ----CCCTCGGGGAGGGTGGGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226294 19 + 16356641 ----CCCTCGGGGAGGGCGGGAA i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2623076 19 + 11732439 ----CCCTCGGGGAGGGCGGGGA i aotNan1.NW_018500483v1 I 35 C 0 s otoGar3.GL873542 22787718 12 + 22939663 -----------CCAAAGTACAGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47560325 23 + 47698779 TCATAACCGAGGGAAAGTGAGGA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746492 38 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I a score=140118.000000 s hg38.chr20_KI270870v1_alt 50111 16 + 183433 AGGTGCTGC------AGGTGGA s panTro5.chr20 66375109 16 + 66533130 AGGTGCTGC------AGGTGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055860 16 + 62195757 AGGTGCTGC------AGGTGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441226 16 - 578057 AGGTGCTGC------AGGTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967774 16 - 110113093 AGGTGCTGC------AGGTGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695513 16 - 92844088 AGGTGCTGC------AGGTGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362867 16 + 96509753 AGGTGCTGC------AGGTGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832681 16 - 16982598 AGGTGCTGC------AGGTGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635735 16 - 3785965 AGGTGCTGC------AGGTGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257457 16 - 90373283 AGGTGCTGC------AGGTGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14619 16 - 179258 AGTTGCTGC------AGGTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508521 16 - 5823884 AGGTGCTGC------AAGTGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160858 16 + 159171411 AAGTTTTGC------AGGTGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226313 16 + 16356641 AGGGTTTGC------AGGTGGA i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2623095 16 + 11732439 AGGTTTTGC------AGGTGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22787730 22 + 22939663 AAGCTATAACCCAAGAAGTGAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181746530 16 + 182113224 AGGAGCCAC------TAGAAGG i mm10.chr2 I 38 C 0 s canFam3.chr24 47560348 16 + 47698779 TGTTGTCAC------AGGCCGA i canFam3.chr24 C 0 I 344 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I a score=91665.000000 s hg38.chr20_KI270870v1_alt 50127 17 + 183433 GAGACTTCGGGACACGT s panTro5.chr20 66375125 17 + 66533130 GAGACTGCGGGACACGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055876 17 + 62195757 GAGACTGCGGGACACGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441242 17 - 578057 GAGACTGCGGGACACGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967790 17 - 110113093 GAGACTGCGGGACACGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695529 17 - 92844088 GAGACTCCGGGGCACGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362883 17 + 96509753 GAGACTCCGGGGCACGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832697 17 - 16982598 GAGACTCCGGGGCACGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635751 17 - 3785965 GAGACTCCGGGGCACGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257473 17 - 90373283 GAGACTCCGGGGCACCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14635 17 - 179258 GAGACTCTGGGGCACGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508537 17 - 5823884 GCGACTCTGGGGCACGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160874 15 + 159171411 GAGAC--CAGGACTTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226329 15 + 16356641 GAGAC--CAGGACTCGG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2623111 15 + 11732439 GAGAC--CAGGATGCGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22787752 17 + 22939663 AGGATCCACTTGTATGA i otoGar3.GL873542 C 0 I 4 s mm10.chr2 181746546 17 + 182113224 GCAAGTCAGAGAAGCAG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560364 344 + 47698779 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e cebCap1.NW_016107870v1 1091505 106 + 1231380 I a score=727389.000000 s hg38.chr20_KI270870v1_alt 50144 62 + 183433 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAGCTGAAGGAAGGAGAGGAGCCATAGCTGATTAT s panTro5.chr20 66375142 62 + 66533130 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAGCTGAAGGAAGGAGAGGAGCCATAGCTGATtat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055893 62 + 62195757 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAGCTGAAGGAAGGAGAGGAGCCATAGCTGATtat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441259 62 - 578057 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAGCTGAAGGAAGGAGAGGAGCCATAGCTGATtat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967807 62 - 110113093 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAGCTGAAGGAAGGAGAGGAGCCATAGGTGATTAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695546 62 - 92844088 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAACTGAAGGAAGGAGAGGAGCCATAGCTGATTAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362900 62 + 96509753 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAACTGAAGGAAGGAGAGGAGCCATAGCTGATTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832714 62 - 16982598 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAACTGAAGGAAGGAGAGGAGCCATAGCTGATTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635768 62 - 3785965 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAACTGAAGGAAGGAGAGGAGCCATAGCTGATTAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257490 62 - 90373283 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAACTGAAGGAAGGAGAGGAGCCATAGCTGATTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14652 62 - 179258 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAACTGAAGGAAGGAGAGGAGCCATAGCTGATTAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508554 62 - 5823884 GGCTCTGGGA-GCAGGTGCAAAGGGTTATAACTGAAGGAAGGAGAGGAGCCATAGCTGATTAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160889 62 + 159171411 GGCTCTGGGA-GCAGGTGCAAAGGGTTGTAGCTGAAGGAAGGAGAGGAGCCAGAGCTGATTAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226344 62 + 16356641 GGCTCTGGGA-GCAGGTGCGAAGGGTTGTAGCTGAAGGAAGGAGAGGAGCCAGAGCTGATTAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091611 62 + 1231380 GGCTCTGGGA-GCAGGTGCAGAGGGTTGTAGCTGAAGGAAGGAAAGGAGCCAGAGCTGATTAT i cebCap1.NW_016107870v1 I 106 C 0 s aotNan1.NW_018500483v1 2623126 61 + 11732439 GGCTCTGGGA-GCAGGTGCAAAGGCTTGTAGCTG-AGGAAGGAGAGGAGCCAGAGCTGATTAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22787773 58 + 22939663 GTCTCCAAAATACAGGGGCAAATGCTTATAAATCAA-----GAGAAAAGCCACAATCAAATAG i otoGar3.GL873542 I 4 C 0 s mm10.chr2 181746563 60 + 182113224 GGCTCAGAGA-TTAAGTGCAAAAGGTTACAATATAAGGAA--AGAGAAGTCACAGCTGAATGT i mm10.chr2 C 0 I 2600 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560364 344 + 47698779 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I a score=257876.000000 s hg38.chr20_KI270870v1_alt 50206 29 + 183433 TCATTGACGGTAA-----TGCTACACAGGGATTA s panTro5.chr20 66375204 29 + 66533130 tcattgacagtaa-----tgctacacagggatta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055955 29 + 62195757 tcattgacggtaa-----tgctacacagggatta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441321 29 - 578057 tcattgacggtaa-----tgctacacagggatta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967869 29 - 110113093 TCATTGACGGTAA-----TGCTACACAGGGATTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695608 29 - 92844088 TGATTGACAGTAA-----TGCTACACAGGAATTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362962 29 + 96509753 TGATTGACAGTAA-----TGCTACACAGGAATTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832776 29 - 16982598 TGATTGACAGTAA-----TGCTACACAGGAATTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635830 29 - 3785965 TGATTGACAGTAA-----TGCTACACAGGAATTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257552 29 - 90373283 TGATTGATAGTAA-----TGCTACACAGGAATTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14714 29 - 179258 TGATTGACAGTAA-----TGCTACACAGGAATTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508616 30 - 5823884 TGATTGACAGTAA----TTGCTACACAGGAATTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160951 29 + 159171411 TCCTTGATGGTAA-----TGCTACACAGGGATTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226406 29 + 16356641 TCCTTGATGTTAA-----TGCTACACAGGGATTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091673 29 + 1231380 TCCTTGATGTTGA-----TGCTACACAGGGATTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2623187 29 + 11732439 TCCTTGACGGTAA-----TGCTACAcagggattc i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22787831 34 + 22939663 GAAAAAAGGACAAATGTGGGTTAAGCAGAGATGA i otoGar3.GL873542 C 0 I 678 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560364 344 + 47698779 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I a score=227949.000000 s hg38.chr20_KI270870v1_alt 50235 26 + 183433 AAATCT-----GTCAACTTGAATAAACCTTA s panTro5.chr20 66375233 26 + 66533130 aaatca-----gtcaacttgaataaacctta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62055984 26 + 62195757 aaatca-----gtcaacttgaataaacctta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441350 26 - 578057 aaatca-----gtcaacttgaataaacctta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967898 26 - 110113093 AAATCA-----GTCAACTTGAATAAACCTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695637 26 - 92844088 AAATCA-----GTCAACTTGAATAAACCATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96362991 26 + 96509753 AAATCA-----GTCAACTTGAATAAACCGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832805 26 - 16982598 AAATCA-----GTCAACTTGAATAAACCGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635859 26 - 3785965 AAATCA-----GTCAACTTGAATAAACCGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257581 26 - 90373283 AAATCA-----GTCAACTTGAATAAACCGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14743 26 - 179258 AAATCA-----GTCAACTTGAATAAACCGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508646 26 - 5823884 AAATCA-----GTCAGCTTGAATAAACCGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58160980 31 + 159171411 AAACCAGTCAGGTCAACTGGAATAAACCTTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226435 31 + 16356641 AAACCAGTCAGGTCAACTGGAATAAACCTTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091702 31 + 1231380 AAACCAGTCAGGTCAACTGGAATAAACCTTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2623216 31 + 11732439 aaaccagtcaggtcaactggaataaaccttg i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560364 344 + 47698779 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e otoGar3.GL873542 22787865 678 + 22939663 I a score=88686.000000 s hg38.chr20_KI270870v1_alt 50261 12 + 183433 AGAATAAGGCTG s panTro5.chr20 66375259 12 + 66533130 agaataaggctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056010 12 + 62195757 agaataaggctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441376 12 - 578057 agaataaggctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967924 12 - 110113093 AGAATAAGGCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695663 12 - 92844088 AGAATAAGGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363017 12 + 96509753 AGAATAAGGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832831 12 - 16982598 AGAATAAGGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635885 12 - 3785965 AGAATAAGGCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257607 12 - 90373283 AGAATAAGGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14769 12 - 179258 AGAATAAGGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508672 12 - 5823884 AGAATAAGGCTG i colAng1.NW_012114444v1 C 0 C 0 s aotNan1.NW_018500483v1 2623247 12 + 11732439 agaataaggctg i aotNan1.NW_018500483v1 C 0 I 49 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560364 344 + 47698779 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e saiBol1.JH378156 16226466 0 + 16356641 C e cebCap1.NW_016107870v1 1091733 0 + 1231380 C e calJac3.chr5 58161011 0 + 159171411 C e otoGar3.GL873542 22787865 678 + 22939663 I a score=748608.000000 s hg38.chr20_KI270870v1_alt 50273 140 + 183433 Aggcggggcgcggtggctcacgcctgtaatcccagcactttgggaggcggaggcgggccgatcacaaggtcaggagatggagaccatcctggctaacatggtgaaacccccgtctctactaaaaatgcaaaaaaattagc s panTro5.chr20 66375271 140 + 66533130 aggcggggcgcggtggctcacgcctgtaatcccagcactttgggaggcggaggcgggccgatcacaaggtcaggagatcgagaccatcctggctaacacggcgaaacccccgtctctactaaaaatgcaaaaaaattagc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056022 140 + 62195757 aggcggggcgcggtggctcacgcctgtaatcccagcactttgggaggcggaggcgggccgatcacaaggtcaggagatcgagaccatcctggctaacatggcgaaacccccgtctctactaaaaatgcaaaaaaattagc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441388 140 - 578057 aggcggggtgcggtggctcacgcctgtaatcccagcactttgggaggcggaggcgggccgatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaacccccgtctctactaaaaatgcaaaaaaattagc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109967936 138 - 110113093 Aggcggggcgcggtggctcacgcctgtaat-ccagcactttgggaggtggaggccggccgatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaacccccgtctctgctaaaaatac-aaaaaattagc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695675 138 - 92844088 Aggccaggtgcggtggctcacgcctgtaatcccagcactttgagaagctgaggtgggcggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaa-ccccgtctctactaaaaatac-agaaaattagc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363029 138 + 96509753 Aggccaggtgcggcggctcacgcctgtaatcccagcactttgagaagctgaggtgggcggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaa-ccccgtctctactaaaaatac-agaaaattagc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832843 138 - 16982598 Aggccaggtgcggtggctcacgcctgtaatcccagcactttgagaagctgaggtgggcggatcacaaggtcaggagatcgagaccatcctgtctaacacggtgaaa-ccccgtctctactaaaaatac-agaaaattagc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3635897 138 - 3785965 Aggccaggtgtggtggctcacgcctgtaatcccggcactttgaaaagctgaggtgggcggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaa-ccccgtctctactaaaaatac-agaaaattagc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257619 138 - 90373283 Aggccaggtgcggtggctcacgcctgtaatcccagcactttgagaagctgaggtgggtggatcacaaggtcaggagttggagaccatcctggctaacacggtgaaa-ccccatctttactaaaaatac-agaaaattagc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14781 138 - 179258 Aggccaggtgcggtggctcacgcctgtaatcccggcactttgagaagctgaggtgggcggatcacaaggtcaggagatcgagaccatcctggctaacacggtgaaa-ccccgtctctactgaaaatac-agaaaattagc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508684 138 - 5823884 Aggccaggtgcggtggctcacgcctgtaatcccagcactttgagaggctgagatgggcggatcacaaggtcaggagatggagaccatcctggctaacacggtgaga-ccccgtctctactaaaaatac-agaaaattagc i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560364 344 + 47698779 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e saiBol1.JH378156 16226466 0 + 16356641 C e cebCap1.NW_016107870v1 1091733 0 + 1231380 C e calJac3.chr5 58161011 0 + 159171411 C e aotNan1.NW_018500483v1 2623259 49 + 11732439 I e otoGar3.GL873542 22787865 678 + 22939663 I a score=256473.000000 s hg38.chr20_KI270870v1_alt 50413 46 + 183433 tgggcgtgatggcgggtgtctgtagtcccagctactcgc----gaggctg s panTro5.chr20 66375411 46 + 66533130 tgggcgtgatggtgggtgtctgtagtcccagctactggc----gaggctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056162 46 + 62195757 tgggcgtgatggcgggtgtctgtagtcccagctactcgc----gaggctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441528 46 - 578057 tgggcgtgatggcgggtgtctgtagtcccagctactcgc----gaggctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968074 46 - 110113093 tgggcgtgatggtgggtgtctgtagtcccagctactcgc----gaggctg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695813 46 - 92844088 cgagcgtggtggcgggcgcctgtagtcccagctactcgg----gaggctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363167 46 + 96509753 cgagcgtggtggcgggcgcctgtagtcccagctactcgg----gaggctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16832981 46 - 16982598 cgagcgtggtggcgggcgcctgtagtcccagctactcgg----gaggctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636035 46 - 3785965 cgggcgaggtggcaggcgcctgtagtcccagctattcgg----aaggctg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257757 46 - 90373283 tgggcgtggtggcgggcgcctgtagtcccagctactcgg----gaggctg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14919 46 - 179258 caggtgtggtggcaggcgcctgtagtcccagctactcgg----gaggctg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508822 46 - 5823884 cgggcgtggtggcgggcgcctgtagtcccagctactcgg----gcggctg i colAng1.NW_012114444v1 C 0 C 0 s canFam3.chr24 47560708 44 + 47698779 TGGGCACTTGGGTG------TGTGGTACCCGCTGCCCGGCCACGAGGCTG i canFam3.chr24 I 344 I 280 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e saiBol1.JH378156 16226466 0 + 16356641 C e cebCap1.NW_016107870v1 1091733 0 + 1231380 C e calJac3.chr5 58161011 0 + 159171411 C e aotNan1.NW_018500483v1 2623259 49 + 11732439 I e otoGar3.GL873542 22787865 678 + 22939663 I a score=578185.000000 s hg38.chr20_KI270870v1_alt 50459 112 + 183433 ag---gcaggagaatggcgtgaacctggcaggcggagcttgccgtgagccgagatcgtgccactgcactccagcctgggtgac--agtgagacttcgtctcaaaaaaaaa-aaaaaaa s panTro5.chr20 66375457 112 + 66533130 ag---gcaggagaatggcatgaacccgggaggcggagcttgccgtgagccgagatcgtgccactgcactccagcctgggtgac--agtgagacttcgtctcaaaaaaaaa-aaaaaaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056208 108 + 62195757 ag---gcaggagaatggcatgaacccgggaggcggagcttgccgtgagccgagatcgtgccactgcactccagcctgggtgac--agtgagacttcgtctcaaaaaaaaa-aaa---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441574 112 - 578057 ag---gcaggagaatggcatgaacccgggaggcggagcttgccgtgagccgagattgtgccactgcactccagcctgggtgac--agtgagacttcgtctcaaaaaaaaa-aaaaaaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968120 111 - 110113093 ag---gcaggag-atggcatgaacccgggaggtggagcttgctgtgagccgagatcatgccactg--ctccagccggggtgacagagcgagacttggtctcaaaaaaaaa-aaaaaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695859 115 - 92844088 ag---gcaggagaatggcatgaacccgggaggtagagcttgcagtgagccgagaccgtgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaagaaaaaaaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363213 114 + 96509753 ag---gcaggagaatggcgtgaacccgggaggtagagcttgcagtgagccgagaccgtgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaag-aaaaaaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833027 114 - 16982598 ag---gcaggagaatggcgtgaacctgggaggtagagcttgcagtgagccgagaccgtgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaag-aaaaaaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636081 112 - 3785965 ag---gcagaagaatggcgtgaacccaggaggcggagcttgcagtgagccgagactgtgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaag---aaaaa i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257803 113 - 90373283 ag---gcggaagaatggcgtgaacccgggaggtagagcttgcagtgagccgagaccgtgccactgcactccagcatgggtgacagagcgagattccatctc-aaaaaaag-aaaaaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 14965 114 - 179258 ag---gcagaagaatggcgtgaacccgggaggtagagcttgcagtgagccgagaccatgccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaag-aaaaaaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508868 116 - 5823884 aggcagcagaagaatggtgtgaacccgggaggtagagcttgcagtgagccgagaccgtgccactgcactccagcctggatgacagagcaagactctgtctc-aaaaaaag-aaaaaaa i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560752 280 + 47698779 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e saiBol1.JH378156 16226466 0 + 16356641 C e cebCap1.NW_016107870v1 1091733 0 + 1231380 C e calJac3.chr5 58161011 0 + 159171411 C e aotNan1.NW_018500483v1 2623259 49 + 11732439 I e otoGar3.GL873542 22787865 678 + 22939663 I a score=582454.000000 s hg38.chr20_KI270870v1_alt 50571 74 + 183433 a----------gaataaGGCTGAAGCTGGTAgggcgcaggg----------------------------tgcgtgcctagatttagtcccagctacttgggaggctgaggcg s panTro5.chr20 66375569 84 + 66533130 aaaaaaaaaaagaataaggctgaagctggtagggcgcaggg----------------------------tgcgtgcctagatttagtcccagctacttgggaggctgaggcg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056316 73 + 62195757 -----------gaataaggctgaagctggtagggcgcaggg----------------------------tgcgtgcctagatttagtcccagctacttgggaggctgaggcg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441686 74 - 578057 a----------gaataaggctgaagctggtagggtgcaggg----------------------------cgcgtgcctagatttagtcccagctacttgggaggctgaggcg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968231 78 - 110113093 aaaaa------gaataaGGCTGAAGCTGGTAGGGCACAtgg----------------------------cacgtgcctggatttagtcccagctacttgggaggctgaggcg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92695974 77 - 92844088 agaa-------gaataaGGCTGaaactggcagggcacgagg----------------------------tgcgtgcctggatttagtcccagctacttgggaggctgaggca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363327 77 + 96509753 agaa-------gaataaGGCTGaaactggcagggcacgagg----------------------------tgcgtgcctggatttagtcccagctacttgggaagctgaggca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833141 77 - 16982598 agaa-------gaataaGGCTGaaactggcagggcacgagg----------------------------tgcgtgcctggatttagtcccagctacttgggaggctgaggca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636193 77 - 3785965 aaaa-------gaataaGGCTGaaactggcagggcacaagg----------------------------tgcgtgcctggatttagtccctgctacttgggaggctgaggca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257916 77 - 90373283 agaa-------gaataaGGCTGaaactggcggggcacaagg----------------------------tgcgtgcctggatttagtcccagctacttgggagggtgaggca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15079 77 - 179258 agaa-------gaataaGGCTGaaactggcagggcacaagg----------------------------tgcgtgcctggatttagtccctgctacttgggaggctgaggca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5508984 77 - 5823884 agaa-------gaagaaGGCTGaaactggcagggcacaagg----------------------------cgcgtggctggatttagtcccagctacttgggaggctgaggca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161011 101 + 159171411 ---A-------GAATAAGGCTGAAGCTGGCAGGGCAGAGGGCGTGCGCCTTTTAGCACGgggcacagggcatgtgcctgtatttag-cccagctacttgggaggctgaggca i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226466 102 + 16356641 ---A-------GAATAAGGCTGAAGCTGGCAGGACAGAGGGTGTGTGCCTTTTAGCACAgggcacaggacgtgtgcctgtatttagtcccagccatttgggaggctgaggcg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091733 74 + 1231380 ---A-------GAATAAGGCTGAAGCTGGCAGGGCAGAGGG----------------------------CATGTGCCTCTATTtagtcccagctacttgggaggctgaggcg i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560752 280 + 47698779 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e aotNan1.NW_018500483v1 2623259 49 + 11732439 I e otoGar3.GL873542 22787865 678 + 22939663 I a score=712126.000000 s hg38.chr20_KI270870v1_alt 50645 71 + 183433 ggaggattgcttaagtctgggaggttgaggctgcagtgagctatgactgtgtcactgcactccagcctggg s panTro5.chr20 66375653 71 + 66533130 ggaggattgcttgagtctgggaggtcgaggctgcagtgagctatgactgtgtcactgcactccagcctggg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056389 71 + 62195757 ggaggattgcttgagtctgggaggtcgaggctgcagtgagctatgactgtgtcactgcactccagcctggg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441760 71 - 578057 ggaggattgcttgagtctgggaggtcgaggctgcagtgagctatgactgtgtcactgcactccagcctggg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968309 71 - 110113093 ggaggattgcttgagtctgggaggtcgaggctgcagtgagccatgactgtgtcactgcactccagcctggg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696051 69 - 92844088 ggaggattgcttgagtctgggaggtcgaggctgcagtgagctatgac--tgtcactgtactccagcctggg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363404 69 + 96509753 ggaggattgcttgagtctgggaggtcgaggctgcagtgagctatgac--tgtcactgtactccagcctggg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833218 67 - 16982598 ggaggattgcttgagtctgggaggtcgaggctgcagtgagctatgac--tgtcac--tactccagcctggg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636270 69 - 3785965 ggaggattgcttgagtctgggaggtcaaggctgcagtgagctatgac--tgtcactgtactccagcctggg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90257993 69 - 90373283 ggaggattgcttgagtctgggaggtcgaggctgcagtgagctatgac--tgtcactgtactccagcctggg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15156 69 - 179258 ggaggattgcttgagtctgggaggtcgaggctgcagtgagctatgac--tgtcattgtactccagcctggg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509061 69 - 5823884 ggaggattgcttgagtctgggaggtcgaggctgcagtgagctatgac--ggccactgcactccagcctggg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161112 71 + 159171411 ggaggattgcttaaatctaggaggtcgaggctgcagtgagctatgactgtgtcactgtactccagcctggg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226568 71 + 16356641 ggaggactgcttgaatctaggaggtcgaggctgcagtgagctatgactgtgtcagtgcactccagcctggg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091807 71 + 1231380 ggaggattgcttgaatctgggaggtcgaggctgcagtgagctctgactgtgtcactgcactccagcctggg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2623308 71 + 11732439 ggaggattgcttgaatctaggagggtgaggctgcagtgagctatgactgtgtcggtgcactccagcctggg i aotNan1.NW_018500483v1 I 49 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e canFam3.chr24 47560752 280 + 47698779 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e otoGar3.GL873542 22787865 678 + 22939663 I a score=247354.000000 s hg38.chr20_KI270870v1_alt 50716 25 + 183433 tgacagagcgagactccatctcttt s panTro5.chr20 66375724 25 + 66533130 tgacagagcgagactccatctcttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056460 25 + 62195757 tgacagagcgagactccatctcttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441831 25 - 578057 tgacagagcgagactccatctcttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968380 25 - 110113093 tgacagagcgagactccatctcttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696120 25 - 92844088 tgacagagcgagactccatctcttt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363473 25 + 96509753 tgacagagcgagactccatctcttt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833285 25 - 16982598 tgacagagcgagactccatctcttt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636339 25 - 3785965 tgacagagcgagactccatctcttt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258062 25 - 90373283 tgacagagtgagaatccatctcttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15225 25 - 179258 tgacagagcgagactccatctcttt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509130 25 - 5823884 tgacagagcgagactccatctctaa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161183 25 + 159171411 tgacagagcgagatgccaactcttt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226639 25 + 16356641 tgacagagcgagatgccaactcttt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091878 25 + 1231380 tgacagagcgagactccaactcttt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2623379 25 + 11732439 tgacggagtgagactccaactcttt i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47561032 20 + 47698779 GGATAGACCGAAGCACCT-----CA i canFam3.chr24 I 280 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e dasNov3.JH569290 193265 997 - 397369 I e otoGar3.GL873542 22787865 678 + 22939663 I a score=2558056.000000 s hg38.chr20_KI270870v1_alt 50741 261 + 183433 aaaaaaa-gttgagctataaaaacaagttgtaaagggttttgttctgtatg-atcacatcaatgtaaactg-aaaaaa------a--tagtatgtgttgttattggatgtgtatgtagatacaaaaactgtgaaaacatgcagggagatgatacaaaccaatttcagag-atgcccccgctggggaggag--ggCACAGGACAAGCATTCTTCATTGTCTGTCTGACAGTGTGTTTTGAATGCGTGTTTGAATATTTTCATGCTTAAAAAGTAAA s panTro5.chr20 66375749 262 + 66533130 aaaaaaa-gttgagctataaaagcaagttgtaaagggttttgttctgtatg-atcacatcaatgtaaactg-aaaaaa------a-atggtatgtgttgttattggatgtgtatgtagatacaaaaactgtgaaaacatgcagggagatgatacaaaccaatttcagag-atgcccccgctggggaggag--ggcacaggaCAAGCATTCTTCATTGTCTGTCTGACAGTGTGTTTTGAATGCGTGTTTGAATATTTTCATGCTTAAAAAGTAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056485 262 + 62195757 aaaaaaa-gttgagctataaaagcaagttgtaaagggttttgttctgtatg-atcacatcaatgtaaactg-aaaaaa------a-atggtatgtgttgttattggatgtgtatgtagatacaaaaactgtgaaaacatgcagggagatgatacaaaccaatttcagag-atgcccccgctggggaggag--ggcacaggaCAAGCATTCTTCATTGTCTGTCTGACAGTGTGTTTTGAATGCGTGTTTGAATATTTTCATGCTTAAAAAGTAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 441856 262 - 578057 aaaaaaa-gttgagctataaaagcaagttgtaaagggttttgttctgtatg-atcacatcaatgtaaactg-aaaaaa------a-atggtatgtgtttttcttggatgtgtatgtagatacaaaaactgtgaaaacatgcagggagatgatacaaaccaatttcagag-atgcccccgctggggaggag--ggcacaggaCAAGCATTCTTCATTGTCTGTCTGACAGTGTGTTTTGAATGCGTGTTTGAATATTTTCATGCTTAAAAAGTAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968405 257 - 110113093 aaaaaaa-gtcgagctataaaagcaagttataaagggttttgttctgtatg-atcacatcaatgtaaactg-aaaaaa------aaatagtatgtgttgttcttggatgtgtacgtagatacaaaaactgtgaaaacatgcagggagatgatacaaacccatttcagag-atgcccctgctggggaggag--ggCACAAGACAAGCATTCTTCGTTGTCTGAC------TGTGTTTTGAATGTGTGTTTGAATATTTTCATCCTTAAAAATTAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696145 258 - 92844088 aaaaaaaagtcgagctataaaagcaagttgtaaagagttttgttctgtgtg-atcacatcaatgtaaactg--aaaaa------a-atgatacgtgttgttcttggatgtgtatgtagatacaaaaactatgaaaacatgcagggagatgatacaaaccaatttcagag-atgcccccgctggggaggag--ggcacaggaCAAGCATTCTTCATTGTCTG----GCAGTGTGTTTTGAATGTGCGTTTGAATATTTTCATGCTTAAAAATTAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363498 259 + 96509753 aaaaaaaagtcgagctataaaagcaagttgtaaagagttttgttctgtgtg-atcacatcaatgtaaactg-aaaaaa------a-atgatacgtgttgttcttggatgtgtatgtagatacaaaaactatgaaaacatgcagggagatgatacaaaccaatttcagag-atacccccgctggggaggag--ggcacaggaCAAGCATTCTTCATTGTCTG----ACAGTGTGTTTTGAATGTGCGTTTGAATATTTTCATGCTTAAAAATTAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833310 259 - 16982598 aaaaaaaagtcgagctataaaagcaagttgtaaagagttttgttctgtgtg-atcacataaatgtaaactg-aaaaaa------a-atgatacgtgttgttcttggatgtgtatgtggatacaaaaactatggaaacatgcagggagatgatacaaaccaatttcagag-atgcccccgctggggaggag--ggcacaggaCAAGCATTCTTCATTGTCTG----ACAGTGTGTTTTGAATGTGCGTTTGAATATTTTCATGCTTAAAAATTAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636364 259 - 3785965 aaaaaaaagtcgagctataaaagcaagttgtgaagaattttgttctgtatg-atcacgtcaatgtaaactg-aaaaaa------a-atgacacgtgttgttcttggatgtgtatgtagatacaaaaactatgaaaacatgcagggagatgatacaaagcaatttcagag-atgcccccgctggggaggag--ggcacaggaCAAGCATTCTTCATTGTCTG----ATAGTGTGTTTTGAATGTGCGTTTGAATGTTTTCATGCTTAAAAATTAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258087 259 - 90373283 aaaaaaaagtcgagctataaaagcaagtggtaaagagttttgttctgtttg-atcacatcaatgtaaactg-aaaaaa------a-atgatacgtgttgttcttggatgtgtatgtagatacaaaaactatgaaaacatgcagggagatgatacaaaccaatttcagag-atgcccccactggggaggag--ggcacaggaCAAGCATTCTTCATTGTCTG----ACAGTGTGTTTTGAATGTGCGTTTGAATATTTTCATGCTTAAAAATTAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15250 259 - 179258 aaaaaaaagtcgagctataaaagcaagttgtaaagagttttgttctgtatg-atcacatcaatgtaaactg-aaaaaa------a-atgatacgtgttgttcttggatgtgtatgtagatacaaaaactatgaaaacatgcagggagatgatacaaagcaatttcagag-atgcccccgctggggaggag--ggcacaggaCAAGCATTCTTCATTGTCTG----ACGGTGTGTTTTGAATGTGCGTTTGAATATTTTCATGCTTAAAAATTAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509155 258 - 5823884 aaaaaaaGgtcgagctataaaagcaagttgtaaagagttttgttctgtatg-atcacatcaatgtaaactg-aaaaaa------a-a-ggtatgtgttgttcttggatgtgtatgtagatacaaaaactatgaaaacatacagggagatgatacaaaccaatttcagag-atgcccctgctggggaggag--ggCACAGGACAAGCGTTCTTCATTGTCTG----ACAGTATGTTTTGAATGTGCGTTTGAATATTTTCTTGCTTAAAAATTAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161208 243 + 159171411 taaaaaaagtggagttataaaagcaagttgtaaagggttttgttctgtatg-atggcatcaatgtgaaa---tgaaac------a-ctggtatgtgttgtttt--ggtgtgtatgtaggtacaaaatctatgaaaatatgccgagtgatgatacaaatcagtttcagggaatgccccctctggggaggat--ggcacaggaCAAGTATTCATCATTGTCTGTCTGACAATA-----------------TGAACATTTTCCTGCTTAAAAATTAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226664 263 + 16356641 taaaaaaagttgagctataaaagcaagttgtaaagggttttgttctgtatg-atggcatcaatgtaaact--taaaaa------a-aaggtatgtattgttctcagatgtatatgtagatacaaaaactatgaaaatatgcagagcgatgatacaaaccaatttcggggaatgccccctctggggaggat--ggcacaggaaAAGTGTTCATCACTGTCTGTCCCACGGTGTGTTTAGAATGTGTGTTTGAACATTTTCATGCTTAAAGATTAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1091903 262 + 1231380 taaaaaaagttgagctataaaagcaagttgtgaagggttttgttctgtatg-atggcatcaatgtaaactg-aaaaaa------a-atggtatgtgttgttcttgcatgtgtatgtagatacaaaaac--tgaaaatatgcagagcgatgatacaaaccaatttcagggaatgccccctctggggaggat--ggcacaggaaAAGTATTCATCATTGTCTGTCTGACAGTGTGTTTTGAATGTGCGTTTGAACATTTTCATGCTTAAAGATTAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2623404 262 + 11732439 taaaaaaagttgagctataaaagcaagttgtaaagggttttg-tctgtctg-atggcatcaatgtgaactgaaaaaca------a-atggtatgtgttgttcttgggtgtgt-tttagatacaaaaat-atgaaaatatgcagagtgatgatacaaaccagtttcagggaacgccccctctggggaggAT--GGCGCAGGACAAGTATTCATCACTGTCTGTCTGACAATGTGTTTTGAATGTGTGTTTGAACATTTTCATGCTTAAAAATTAAA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22788543 243 + 22939663 aaaataatgtggagtgataaaagcaagttgc-atgggctttgttctgtatg-atagccttagtgcaactcc-ccaaaattatgca-ctgttatgcactgttctggggtatgtatacagacactaaaactatgaaaaca--cagaga-actatgcaaaccaatttcagagggtgacctctctggggaggAC--AGCT--GGCCGAGTGTTCATCACTGTCTG---------------------TGTATGTGAACATTTTCAGGCTTAAAAATTGAA i otoGar3.GL873542 I 678 I 300 s canFam3.chr24 47561052 212 + 47698779 AAACGAAGGCTGCGCAGTAGAAGCGC----CAGCGAACGTCGTGTTGTCTGCATCGCATCAACGTGACCTG-CCG---------A-CTGCTGTGCACGGCGCCTGGATGTGCGTCGGGGT---AACCCTGTG-ACACAGGC-GGCCGGCGACGCGAATC----CCAGGG---GCCCCTCCCGGAGGGGTGCTGACCC---CCGAGTGTTTCTCATTGTCTT---------------------TGTGTTTGAACATTTTCTTGC------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194262 220 - 397369 -aaagaaagttgag-tggaaaagcaagttgcgaagagttttgttctgtatg-attacatcagtgtaat----gaaaca------c-acattgcccattgctcctggacgtctgtaca-acaggaaaaccatgaaca-atacatggagaggataCAGGCCCACCTGGGGA-GCCGCACCGCCGCAGGGCTT--CGCGTGGACCACGCTTCC----------------------------------TGTTTGGAAGGGCTTGTGCTTAAAG-TTAA- i dasNov3.JH569290 I 997 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I a score=1263053.000000 s hg38.chr20_KI270870v1_alt 51002 123 + 183433 CAACAAAAGATGATGGGAGATAGGATGA--GGAGGCAGCGTGCTGAAAAGG--GTCCATTTCTAGGTGGCGAAGAGAGTGAGTTG-GGGCAGT-GGGCTGGGCAGAGGGAGGGCTTCGAGGATTCCAGG s panTro5.chr20 66376011 123 + 66533130 CAACAAAAGATGATGGGAGATAGGATGA--GGAGGCTGCGTGCTGAAAAGG--GTCCATTTCTAGGTGGCGAAGAGAGTGAGTTG-GGGCAGT-GGGTTGGGCAGAGGGAGGGCTTTGAGGATTCCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056747 123 + 62195757 CAACAAAAGATGATGGGAGATAGGATGA--GGAGGCTGCGTGCTGAAAAGG--GTCCATTTCTAGGTGGCGAAGAGAGTGAGTTG-GGGCAGT-GGGTTGGGCAGAGGGAGGGCTTTGAGGATTCCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442118 123 - 578057 CAACAAAAGATGATGGGAGATAGGATGA--GGAGGCAGCGTGCTGAAAAGG--GTCCATTTCTAGGTGGCGAAGAGAGTGAGTTG-GGGCAGT-GGGCTGGGCAGAAGGAGGGCTTTGAGGATTCCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968662 123 - 110113093 CAACAAAAGATGATGGGAGATAGGATGA--GGAGGCAGCGTGCTGAAAAGG--GTCCATTTCTAGGTGGTGAAGAGAGTGAGTTG-GGGTAGT-GGGCTGGGCAGAGGGAGGGCTTTGAGGATTCTAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696403 123 - 92844088 CAACAAGAGATGATGGGAGATAGGATGA--GGAGGCAGCGTGCTGAAACGG--GTCCATTTCCAGGTGGTGAAGAGAGTGAGCTG-GGGTAGT-GGGCTGGGCAGAGGGAGGGCTTTGAGGGTTCCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363757 123 + 96509753 CAACAAGAGATGATGGGAGATAGGATGA--GGAGGCAGCGTGCTGAAACGG--GTCCACTTCCAGGTGGTGAAGAGAGTGAGCTG-GGGTAGT-GGGCTGGGCAGAGGGAGGGCTTTGAGGGTTCCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833569 123 - 16982598 CAACAAGAGATGATGGGAGATAGGATGA--GGAGGCAGCGTGCTGAAACGG--GTCCATTTCCAGGTGGTGAAGAGAGTGAGCTG-GGGTAGT-GGGCTGGGCAGAGGGAGGGCTTTGAGGGTTCCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636623 123 - 3785965 CAACAAGAGATGATGGGAGATAGGATGA--GGAGGCAGCGTGCTGAAACGG--GTCCATTTCCAGGTGGTGAAGAGAGTGAGCTG-GGGTAGT-GGGCTGGGCAGAGGGAGGGCTTTGAGGGTTCCAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258346 123 - 90373283 CAACAAGAGATGATGGGAGATAGGATGA--GGAGGCAGCGTGCTGAAACGG--GTCCATTTCCAGGTGGTGAAGAGAGTGAGCTG-GGGTAGT-GGGCTGGGCAGAGGGAGGGCTTTGAGGATTCCAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15509 123 - 179258 CAACAAGAGATGATGGGAGATAGGATGA--GGAGGCAGCGTGCTGAAACGG--GTCCATTTCCAGGTGGTGAAGAGAGTGAGCTG-GGGTAGT-GGGCTGGGCAGAGGGAGGGCTTTGAGGGTTCCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509413 123 - 5823884 CAACAAGAGATGATGGGAGATAGGCTGA--GGAGGCAGTGTGCTGAAAAGG--GTCCATTTCCAGGTGGTGAAGAGAGTGGGTTG-GGGTAGT-GGGCTGGGCAGAGGGAGGGCTTTGAGGATTCCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161451 125 + 159171411 CCACAAAAGATGATGGGAAGTAGGATGA--GGAGGCAGCATGCTGAAAATGGAGTCAGTTTCCAGGTGGTGAAGAGACCGAGTTG-GGGTAGT-GGGCTGGGCAGAGGGAGGGCTTTGAGGACTCCAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16226927 126 + 16356641 CCAC-AAAGATGATGGGAGGTCGGAGGGGTGGGGGCGGCATGCTGAGAAGGGAGTCCATTTCCAGGTGGTGAAGAGAGTGAGCTG-GGGCAGC-GGGCTGGGCAGAGGGAGGGCTTCGAGGACTCCAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1092165 124 + 1231380 CCACAAAGGATGATGGGAGGTAGGGTGA--GGAGGCAGCATGTTGA-AAGGGAGTCCATTTCCAGGTAGTGAAGAGAGTGAGCTG-GGGGAGT-GGGCTGGGCAGAGGGAGGGCTTCGAGGACTCCAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2623666 124 + 11732439 CCACAAAAGATGATGGGAAGTAGG-TGA--GGAGGCAGCATGCTGAAAAGGGAGTCCGTTGCCAGGTGCTGAAGAGAGTGAGTTG-GGGTAGT-GGGCTGGGCAGACGGAGGGCTTTGAGGACTCCAGG i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47561264 103 + 47698779 CCCCAAAACGTAAGGGGAGAGGCGACGA--AAAGACGGCGCCC---AGGGC--GTTCACCCCCAGGG------------GAGGTG-GGG-----GCGCTGGGCCGAGGGAGGACTTGGA-CATTCCAGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194482 95 - 397369 --AGAAAAGGCGGTGGGGGGTGGGATGA--GGACGC----CCCTGCAGTGG--G---------------------GAGTGAGCAGAAGGTGGTGGGGCTGCGCAGAG---GGGCTTTTAGGGTTCTGGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I e otoGar3.GL873542 22788786 300 + 22939663 I a score=612116.000000 s hg38.chr20_KI270870v1_alt 51125 69 + 183433 AAGAATTCTGTAGGAAAA---GGAGCCAGGCAGAAG------------GG-------TGGGAGAGCCACAGGGGCTGG----AAGCGGG----------------------GTGGTA s panTro5.chr20 66376134 69 + 66533130 AAGAATTCTGTAGGAAAA---GGAGCCAGGCAGAAG------------GG-------TGGGAGAGCCACAGGGGCTGG----AAGCGGG----------------------GTGGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056870 69 + 62195757 AAGAATTCTGTAGGAAAA---GGAGCCAGGCAGAAG------------GG-------TGGGAGAGCCACAGGGGCTGG----AAGCGGG----------------------GTGGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442241 69 - 578057 AAGAACTCTGTAGGAAAA---GGAGCCAGGGAGAAG------------GA-------TGGGAGAGCCACAGGGGCTGG----AAGCGGG----------------------GTGGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968785 69 - 110113093 AAGAATTCTGTAGGAAAA---GGAGCCAGGGAGAAG------------GG-------TGGGAGAGCCACAGGGGCTGG----AAGCGGG----------------------GTGGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696526 69 - 92844088 AAGAATTCTGTAGGAAAA---GGAGCCAGGGAGAAG------------GG-------TGGGAGGGCCACAGGGGCTGG----AAGCAGC----------------------GTGGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363880 69 + 96509753 AAGAATTCTGTAGGAAAA---GGAGCCAGGGAGAAG------------GG-------TGGGAGGGCCACAGGGGCTGG----AAGCAGC----------------------GTGGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833692 69 - 16982598 AAGAATTCTGTAGGAAAA---GGAGCCAGGGAGAAG------------GG-------TGGGAGGGCCACAGGGGCTGG----AAGCAGC----------------------GTGGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636746 69 - 3785965 AAGAATTCTGTAGGAAAA---GGAGCCAGGGAGAAG------------GG-------TGGGAGGGCCACAGGGGCTGG----AAGCAGG----------------------GTGGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258469 69 - 90373283 AAGAATTCTGTAGGAAAA---GGAGCCAGGGAGAAG------------GG-------TGGGAGGGCCACAGGGGCTGG----AAGCAGG----------------------GTGGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15632 69 - 179258 AAGAATTCTGTAGGAAAA---GGAGCCAGGGAGAAG------------GG-------TGGGAGGGCCACAGGGGCTGG----AAGCAGG----------------------GTGGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509536 69 - 5823884 AAGAATTCTGTAGGAAAA---GGAGCCAGGGAGAAG------------GG-------TGGGAGGGCCGCAGGGGCTGG----AAGCAGG----------------------GTGGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161576 89 + 159171411 AAGAATTCTGTAGGAAAA-----AGCTAGGGAGAAG------------GG-------TGGGAGGGCCGCAGGGGCTGGAATCAATCAGGCTGGTGGCTCCAGGTTC----TGTGGTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16227053 85 + 16356641 AAGAGTTCTGTAGGAAGA-----AGCTAGGGAGGAG------------GG-------TGGGAGGGCTGCAGGGGCGGG----AATCGGGCTCGTGGCTCCAGGTTC----CGTGGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1092289 84 + 1231380 AAGGATTCTGCAGGAAGA-----AGCTAGGGAGGA-------------GG-------TGGGAGGGCCGCAGGGGCTGG----AATCTGGCTGGTGGCTCCAGGTTC----CGTGGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2623790 85 + 11732439 AAGAATTCTGTAGGAAAA-----AGCTAGGGAGAAG------------CG-------TGGGAGGGCCGCAGGGGCTGG----AATCGGGCTGGCGGCTCCAGGTTC----CGTGGTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22789086 72 + 22939663 AAAAATTATGGGGGATGATGAAGAGGCAGCTGAAAGAAATCCACCCCAGG-------TGGTAG------AGAGGGTGG----A---GGG----------------------GTG--- i otoGar3.GL873542 I 300 I 4 s canFam3.chr24 47561367 55 + 47698779 --CAGTTCTGTGGCGGGA---GGAGCT-----GAAG------------AC-------CGGGGAGGGTCCGGGGCCAGG----GAGCTG----------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194577 86 - 397369 ---AGGCTTGTAGGAGAA---GGTGCCGGGGAGAAG------------GGAGTGTCATGGCAGAGTCACAGGGGAGGG----TTGGGGG---------CCAGGGCCAGGGCGCGGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56802528 1899 + 57149010 I a score=287303.000000 s hg38.chr20_KI270870v1_alt 51194 25 + 183433 -CTTCCAGGAACCTGAAG--CCCA-----------GGTG-- s panTro5.chr20 66376203 25 + 66533130 -CTTCCAGGAACCTGAAG--CCCA-----------GGTG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056939 25 + 62195757 -CTTCCAGGAACCTGAAG--CCCA-----------GGTG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442310 25 - 578057 -CTTCCAGGAACCTGAAG--CCCA-----------GGTG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968854 25 - 110113093 -CTTCCAGGAGGCTGAAG--CCCA-----------GGTG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696595 25 - 92844088 -CTTCCTGGAACCTGAAG--CCCA-----------GGTG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363949 25 + 96509753 -CTTCCTGGAACCTGAAG--CCCA-----------GGTG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833761 25 - 16982598 -CTTCCTGGAACCTGAAG--CCCA-----------GGTG-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636815 25 - 3785965 -CTTCCTGGAACCTGAAG--CCCA-----------GGTG-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258538 25 - 90373283 -CTTCCTGGAACCTGAAG--CCCA-----------GGTG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15701 25 - 179258 -CTTCCTGGAACCTGAAG--CCCA-----------GGTG-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509605 25 - 5823884 -CTTCCTGGAACCTGAAG--CCCA-----------GGTG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161665 25 + 159171411 -CTTCCAGGAACCTGAAG--CCCA-----------GGTG-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16227138 25 + 16356641 -CTTCCGGGAACCCGAAA--CCCA-----------GGTG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1092373 25 + 1231380 -CTTCCAGGAACCTGAAG--CCCA-----------GGTG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2623875 25 + 11732439 -CTTCCAGGAACCTGACG--CCCT-----------GGTG-- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56804427 25 + 57149010 -CTTCCAGGAACCTGAAG--CCCA-----------GGTG-- i micMur3.chr18 I 1899 I 198 s otoGar3.GL873542 22789162 27 + 22939663 -CGTAGGGGGACTTGGGGATTCCA-----------GGTG-- i otoGar3.GL873542 I 4 C 0 s canFam3.chr24 47561422 22 + 47698779 ----CCGAGGGCTGGGAG--GGCA-----------GGGG-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194663 35 - 397369 GCTCC----AGCCTCAGG--CTCCGCGGTGGCGGTGGTGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I a score=114201.000000 s hg38.chr20_KI270870v1_alt 51219 9 + 183433 AGGACAGGT s panTro5.chr20 66376228 9 + 66533130 AGGACAGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056964 9 + 62195757 AGGACAGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442335 9 - 578057 AGGACAGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968879 9 - 110113093 AGGACAGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696620 9 - 92844088 AGGACAGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363974 9 + 96509753 AGGACAGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833786 9 - 16982598 AGGACAGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636840 9 - 3785965 AGGACAGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258563 9 - 90373283 AGGACAGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15726 9 - 179258 AGGACAGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509630 9 - 5823884 AGGACAGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161690 9 + 159171411 AGGACAGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16227163 9 + 16356641 ACGACAGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1092398 9 + 1231380 AGGACAGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2623900 9 + 11732439 AGGACAGGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22789189 9 + 22939663 GGATCTGGC i otoGar3.GL873542 C 0 I 28 s canFam3.chr24 47561444 9 + 47698779 CGAGCGGGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194698 9 - 397369 AGGCCAGGT i dasNov3.JH569290 C 0 I 16 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56804452 198 + 57149010 I a score=28373.000000 s hg38.chr20_KI270870v1_alt 51228 2 + 183433 GC s panTro5.chr20 66376237 2 + 66533130 GC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056973 2 + 62195757 GC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442344 2 - 578057 GC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968888 2 - 110113093 GC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696629 2 - 92844088 GC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363983 2 + 96509753 GC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833795 2 - 16982598 GC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636849 2 - 3785965 GC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258572 2 - 90373283 GC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15735 2 - 179258 GC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509639 2 - 5823884 GC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161699 2 + 159171411 GC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16227172 2 + 16356641 GC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1092407 2 + 1231380 GC i cebCap1.NW_016107870v1 C 0 I 3391 s aotNan1.NW_018500483v1 2623909 2 + 11732439 GC i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47561453 2 + 47698779 AC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194723 2 - 397369 GC i dasNov3.JH569290 I 16 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56804452 198 + 57149010 I e otoGar3.GL873542 22789198 28 + 22939663 I a score=87295.000000 s hg38.chr20_KI270870v1_alt 51230 11 + 183433 TTGTGC----CATGC s panTro5.chr20 66376239 11 + 66533130 TTGTGC----CATGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056975 11 + 62195757 TTGTGC----CATGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442346 11 - 578057 TTGTGC----CATGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968890 11 - 110113093 TTGCGC----CATGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696631 11 - 92844088 TTGTGC----CACAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363985 11 + 96509753 TTGTGC----CACAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833797 11 - 16982598 TTGTGC----CACAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636851 11 - 3785965 TTGTGC----CACAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258574 11 - 90373283 TTGTGC----CACAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15737 11 - 179258 TTGTGC----CACAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509641 11 - 5823884 TTGTGC----CACAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161701 15 + 159171411 CTGTGCCACACACAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16227174 11 + 16356641 CTGCAC----CACAC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2623911 11 + 11732439 CTGCGC----CACAC i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47561455 11 + 47698779 TTGCCC----CCTGG i canFam3.chr24 C 0 I 10 s dasNov3.JH569290 194725 11 - 397369 TGGCGC----CAAGC i dasNov3.JH569290 C 0 I 59 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56804452 198 + 57149010 I e cebCap1.NW_016107870v1 1092409 3391 + 1231380 I e otoGar3.GL873542 22789198 28 + 22939663 I a score=393147.000000 s hg38.chr20_KI270870v1_alt 51241 50 + 183433 CACCGT-----GGGGGTGAGA-----ACTTGGGCAGAAGAGGCCGTGTG-TGCCGA-GGGAG--------------------- s panTro5.chr20 66376250 50 + 66533130 CACCGT-----GGGGGTGAGA-----ACTTGGGCAGAAGAGGCCGTGTG-TGCCGA-GGGAG--------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62056986 50 + 62195757 CACCGT-----GGGGGTGAGA-----ACTTGGGCAGAAGAGGCCGTGTG-TGCTGA-GGGAG--------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442357 49 - 578057 CACCGT------GGGGTGAGA-----ACTTGGGCAGAAGATGCCGTGTG-TGCCGA-GGGAG--------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968901 50 - 110113093 CACCGT-----GGGGGTGAGA-----GCTTGGGCAGGAGAGGCCGTGTG-TGCCGA-GGGAG--------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696642 50 - 92844088 CACTGT-----GGCAGTGACA-----GCTTGGGCAGGAGAGGCCGTGTG-TGCCGA-GGGAG--------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96363996 50 + 96509753 CACTGT-----GGCAGTGACA-----GCTTGGGCAGGAGAGGCCGTGTG-TGCCGA-GGGAG--------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833808 50 - 16982598 CACTGT-----GGCAGTGACA-----GCTTGGGCAGGAGAGGCCGTGTG-TGCCGA-GGGAG--------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636862 50 - 3785965 CACCGT-----GGCGGTGACA-----GCTTGGGCAGGAGAGGCCATGTG-TGCTGA-GGGAG--------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258585 51 - 90373283 CACTGT-----GGCGGTGACA-----GCTTGGGCAGGAGAGGCCGTATG-TGCCGAGGGGAG--------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15748 50 - 179258 CACCGT-----GGCGGTGACA-----GCTTGGGCAGGAGAGGCCGTGTG-TGCTGA-GGGAG--------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509652 50 - 5823884 CACCGT-----GGCGGTGACA-----GCTTGGGCAGGAGAGGCTGTGTG-TGCCGA-GGGAG--------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161716 50 + 159171411 CTCAGT-----GGGGATGAGA-----GTCTGGGCGGGAGAGGCTGTGTG-TGCCAA-CGGAG--------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16227185 48 + 16356641 CTCAGT-----GGGGATGAGG-----GTCTGGGCGGGAGAGGC--TGTG-TGCCAA-CGGAG--------------------- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2623922 50 + 11732439 CTCAGT-----GGGGGTGAGA-----GTCTGGGCGGGAGAGGCTGTGCG-TGCCCA-CGGAG--------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22789226 49 + 22939663 CACCTG-----GGGAGCAAGG-----GTCTGGGCAGT-GAGGCAGTGTG-TGCCAT-GGGAG--------------------- i otoGar3.GL873542 I 28 C 0 s canFam3.chr24 47561476 51 + 47698779 --CAGC-----GGGAGGGATGGCCCTGCCTCGCCCGCAGAGGAC-TGTG-GCCCGA-GGAG---------------------- i canFam3.chr24 I 10 C 0 s dasNov3.JH569290 194795 77 - 397369 CGCCGTGCGGGGCGGGTGAGA-----ATCCCAGCAGTTGAGGCAGTGGGCTGTCGA-AGGGCCTTCAGGGATGGGCCCTGCTG i dasNov3.JH569290 I 59 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e mm10.chr2 181746623 2600 + 182113224 I e micMur3.chr18 56804452 198 + 57149010 I e cebCap1.NW_016107870v1 1092409 3391 + 1231380 I a score=60364.000000 s hg38.chr20_KI270870v1_alt 51291 4 + 183433 GGGT s panTro5.chr20 66376300 4 + 66533130 GGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057036 4 + 62195757 GGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442406 4 - 578057 GGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968951 4 - 110113093 GGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696692 4 - 92844088 GGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364046 4 + 96509753 GGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833858 4 - 16982598 GGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636912 4 - 3785965 GGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258636 4 - 90373283 GGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15798 4 - 179258 GGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509702 4 - 5823884 GGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58161766 4 + 159171411 GGGT i calJac3.chr5 C 0 I 1296 s saiBol1.JH378156 16227233 4 + 16356641 GGGT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2623972 4 + 11732439 GGGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22789275 4 + 22939663 GGGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181749223 4 + 182113224 GAGC i mm10.chr2 I 2600 C 0 s canFam3.chr24 47561527 4 + 47698779 GGGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194872 4 - 397369 GGGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e micMur3.chr18 56804452 198 + 57149010 I e cebCap1.NW_016107870v1 1092409 3391 + 1231380 I a score=17100.000000 s hg38.chr20_KI270870v1_alt 51295 1 + 183433 C s panTro5.chr20 66376304 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057040 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442410 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968955 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696696 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364050 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833862 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636916 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258640 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15802 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509706 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163066 1 + 159171411 C i calJac3.chr5 I 1296 C 0 s saiBol1.JH378156 16227237 1 + 16356641 C i saiBol1.JH378156 C 0 I 1196 s aotNan1.NW_018500483v1 2623976 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 I 1153 s otoGar3.GL873542 22789279 1 + 22939663 C i otoGar3.GL873542 C 0 I 19 s mm10.chr2 181749227 1 + 182113224 C i mm10.chr2 C 0 C 0 s canFam3.chr24 47561531 1 + 47698779 C i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194876 1 - 397369 C i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e micMur3.chr18 56804452 198 + 57149010 I e cebCap1.NW_016107870v1 1092409 3391 + 1231380 I a score=18238.000000 s hg38.chr20_KI270870v1_alt 51296 2 + 183433 GG s panTro5.chr20 66376305 2 + 66533130 GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057041 2 + 62195757 GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442411 1 - 578057 -G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968956 2 - 110113093 AG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696697 2 - 92844088 AG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364051 2 + 96509753 AG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833863 2 - 16982598 AG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636917 2 - 3785965 AG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258641 2 - 90373283 AG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15803 2 - 179258 AG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509707 2 - 5823884 AG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163067 2 + 159171411 AG i calJac3.chr5 C 0 C 0 s otoGar3.GL873542 22789299 2 + 22939663 AG i otoGar3.GL873542 I 19 I 11 s mm10.chr2 181749228 2 + 182113224 AG i mm10.chr2 C 0 C 0 s canFam3.chr24 47561532 2 + 47698779 AG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194877 2 - 397369 GG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e micMur3.chr18 56804452 198 + 57149010 I e saiBol1.JH378156 16227238 1196 + 16356641 I e cebCap1.NW_016107870v1 1092409 3391 + 1231380 I e aotNan1.NW_018500483v1 2623977 1153 + 11732439 I a score=456109.000000 s hg38.chr20_KI270870v1_alt 51298 70 + 183433 ---GAGAGGGATGAAGATCT-GAATTGAATGG---------------------------ATGCTGAGAGGAAGCTTAGTCATGCATCGCCAAAGACGGCTC s panTro5.chr20 66376307 70 + 66533130 ---GAGAGGGATGAAGATCT-GAATTGAATGG---------------------------ATACTGAGAGGAAGCTTAGTCATGCATCGCCAAAGACAGCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057043 70 + 62195757 ---GAGAGGGATGAAGATCT-GAATTGAATGG---------------------------ATACTGAGAGGAAGCTTAGTCATGCATCGCCAAAGACAGCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442412 70 - 578057 ---GAGAGGGATGAAGATCT-GAATTGAATGG---------------------------ATGCTGAGAGGAGGCTTAGTCATGCATCGCCAAAGACGGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109968958 70 - 110113093 ---GAGAGGGATGAAGATCT-GAATTGAATGG---------------------------ATGCTGAGAGGAAGCTTAGTCATGCATCGCCAAAGATGGCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696699 71 - 92844088 ---GAGAGGGATGGAGATCTGGAATTGAATGG---------------------------ATGCCGAGAGGATGCTTAGTCATGCATCGCCAAAGACGGCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364053 71 + 96509753 ---GAGAGGGATGGAGATCTGGAATTGAATGG---------------------------ATGCCGAGAGGACGCTTAGTCATGCATCGCCAAAGACGGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833865 71 - 16982598 ---GAGAGGGATGGAGATCTGGAATTGAATGG---------------------------ATGCCGAGAGGACGCTTAGTCATGCATCGCCAAAGACGGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636919 71 - 3785965 ---GAGAGGGATGGAGATCTGGAATTGAATGG---------------------------ATGCCGAGAGGACGCTTAGTCACGCGTCGCCAAAGACGGCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258643 70 - 90373283 ---GAGAGGGATGGAGATCT-GAATTGAATGG---------------------------ATGCTGAGAGGACGCTTAGTCATGCATCGCCAAAGACGGCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15805 71 - 179258 ---GAGAGGGATGGAGATCTGGAATTGAATGG---------------------------ATGCCGAGAGGACGCTTAGTCACGCAGCGCCAAAGACGGCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509709 70 - 5823884 ---GAGAGGGATGGAGATCT-GAATTGAATGG---------------------------ATGCCGAGAGGACGCTTAGTCATGCATCGCCAAAGACGGCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163069 63 + 159171411 ---GAGAGGGATGGACATCT-GAAGTGAATGG---------------------------ATGCTGAGAGCACTGTTAGTCATGCATTGCCAAAG------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16228434 63 + 16356641 ---GAGAGGGACGGACATCT-GAAGTGAATGG---------------------------ATGCTGAGAGCACTGTCAGTCATGAGTCACCAAAG------- i saiBol1.JH378156 I 1196 C 0 s otoGar3.GL873542 22789312 67 + 22939663 ---GAGAGGGCTGGACACTC-GAAGAAAACAG----------------------------TGCTGGTAGCACACTCTGTC-TTCTTCATGGAAGGCACCC- i otoGar3.GL873542 I 11 C 0 s mm10.chr2 181749230 67 + 182113224 ---GACAGTGTCAGTGATCT-TAAGACAACGG---------------------------ACACAGCGAAGATATTGACTCATGCATC---AGAGACGATTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47561534 25 + 47698779 ----------------------------------------------------------------GAGAGCTCGCCCCCTCCTGCGGCAC------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194879 98 - 397369 GCCGGGCGGGCTGGGGTCCA-GAGGCAGAAGGTGGAAAACGGCTAAGAGGCCCTCCCCAAAGCAGAGAGCACACTTAATTACATGCCGT--GTGGATGCTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e micMur3.chr18 56804452 198 + 57149010 I e cebCap1.NW_016107870v1 1092409 3391 + 1231380 I e aotNan1.NW_018500483v1 2623977 1153 + 11732439 I a score=286235.000000 s hg38.chr20_KI270870v1_alt 51368 24 + 183433 ATGG--AGTAAATAGAGCACTAAAGG s panTro5.chr20 66376377 24 + 66533130 ATGG--AGTAAATAGAGCACTAAAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057113 24 + 62195757 ATGG--AGTAAATAGAGCACTAAAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442482 24 - 578057 ATGG--AGTAAATAGAGCACTAAAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969028 24 - 110113093 ATGG--AGTAAATAGAGCACTAAAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696770 24 - 92844088 ATGG--AGTAAATAGAGCACTAAAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364124 24 + 96509753 ATGG--AGTAAATAGAGCACTAAAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833936 24 - 16982598 ATGG--AGTAAATAGAGCACTAAAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3636990 24 - 3785965 ATGG--AGTAAATAGAGCACTAAAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258713 24 - 90373283 ATGG--AGTAAATAGAGCACTAAAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15876 24 - 179258 ATGG--AGTAAATAGAGCACTAAAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509779 24 - 5823884 ATGG--AGTAAATAGAGCACTAAAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163132 24 + 159171411 ATAG--AGTAAATAGAGCACTAAAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16228497 24 + 16356641 ATGG--AGCAAACAGAGCACTAAAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1095800 24 + 1231380 ATGG--AGCAGACAGAGCACTAAAGG i cebCap1.NW_016107870v1 I 3391 C 0 s aotNan1.NW_018500483v1 2625130 24 + 11732439 ATGG--AGTAAATAGAGCACTGAGGG i aotNan1.NW_018500483v1 I 1153 C 0 s otoGar3.GL873542 22789379 22 + 22939663 ATGA--AACAGAC--AGTACGGAAGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181749297 17 + 182113224 -TTA--AGCAA------CATTAGAAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47561559 26 + 47698779 ACGGGCGGCGCACAGAGCATCAAAGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 194977 23 - 397369 -GTG--AATAAACGGAGTATTAAAGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1809209 1849 - 2029793 I e micMur3.chr18 56804452 198 + 57149010 I a score=3591650.000000 s hg38.chr20_KI270870v1_alt 51392 205 + 183433 CTGGCTCACTCGCGGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTTCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGTTCCTGC-CTTCCCACTTCCCAAATCCTACTGCTTCTAG s panTro5.chr20 66376401 205 + 66533130 CTGGCTCACTCGCGGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTTCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGTTCCTGC-CTTCCCACTTCCCAAATCCTACTGCTTCTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057137 205 + 62195757 CTGGCTCACTCGCGGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTTCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGTTCCTGC-CTTCCCACTTCCCAAATCCTACTGCTTCTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442506 205 - 578057 CTGGCTCACTCGCGGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTTCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGTTCCTGC-CTTCCCACTTCCCAAATCCTACTGCTTCTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969052 205 - 110113093 CTGGCTCACTCGCGGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTTCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGCTCCTGC-CTTCCCACTTCCCAAATCCTACTGTTTCTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696794 204 - 92844088 CTGGCTCACTCG-GGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTCCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGCTCTTGC-CTTCCCGCTTCCCAAATCCTGCTGTTTCTAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364148 204 + 96509753 CTGGCTCACTCG-GGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTCCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGCTCCTGC-CTTCCCGCTTCCCAAATCCTGCTGTTTCTAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16833960 204 - 16982598 CTGGCTCACTCG-GGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTCCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGCTCCTGC-CTTCCCGCTTCCCAAATCCTGCTGTTTCTAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637014 204 - 3785965 CTGGCTCACTCG-GGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGTTGCTAATTGCACCATAAACA-CTTTCCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGCTCCTGC-CTTCCCGCTTCCCAAATCCTGCTGTTTCTAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258737 204 - 90373283 CTGGCTCACTCG-GGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTTCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTAtccagctacctctcct--tgctcctgc-cttcctgcttcccaaatcctgctGTTTCTAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 15900 204 - 179258 CTGGCTCACTCG-GGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTCCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGCTCCTGC-CTTCCCGCTTCCCAAATCCTGCTGTTTCTAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5509803 204 - 5823884 CTGGCTCACTCC-GGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTTCATCAGGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGCTCCTGC-CTTCCCACTTCCCAAATCCTGCTGTTTCTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163156 205 + 159171411 CTGGCTCACTCACGGAGAGCAGCTTCCCGTGGCTCAACAAGTTTGTAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCATCATAAACA-CTTTTCATCAAGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCGT--TGCTCCTGC-CTTCCCACTTCCCAAATCCTGCTGTTTCTAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16228521 204 + 16356641 CTGGCTCACTTGCGGAGAGCAGTTTCCCGTGGCTCAACAAGTTTATAAT-AACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-CTTTTCATCAAGCAAGTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--TGCTCCTGC-ACTACAGCTTCCCAAATCCTGCTGTTTCTAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1095824 202 + 1231380 CTGGCTCAC-CGCGGAGAGCGG-TTCCCGTGGCCCAACACGTTTATAAT-AGCACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCGTAAACA-CTTTTCATCAAGCAATTGCTGTTTACTCATTTCCCAATCAGCTCGTTATCCAGCTACCTCTCCT--TGCTCCTGC-CTTTCCACTTCCCAAATCCTGCTGTTTCTAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625154 205 + 11732439 CTGGTTCGCTCGCGGAGAGCAGTTTCCCGTGGCTCAACAAGTTTATAATAAACACGGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCATCATAAACA-CTTTTCATCAAGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTCTCCT--CGTTCCTGC-CTTGCCACTTCCCAAACCCTGCTGTTTCTGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56804650 205 + 57149010 CTGGCTCAGTCGTGGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-TTTTTCATCAAGCAATTGCTGTTTACTCATTTGCCAATCAGCACGTTATCCAGCTACCTCGACT--GGCTCCTGC-CTCCCCACTTCCCAAATCCTGCTGTTTCTAG i micMur3.chr18 I 198 I 115 s proCoq1.NW_012150197v1 1811058 205 - 2029793 CTGGCTCAGTCGTGGAGAGCTGTTTCCTGTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCGCAGCTGCTAATTGCACCATAAACA-TTTTTCATCAAGCAATTGCTGTTTACTCATTTGCCAATCAGCATGTTATCCAGCTACCTCGACT--GGCTCCTGC-CTTCCCACTTCCCAAATCCTGCTGTTTCTAG i proCoq1.NW_012150197v1 I 1849 I 118 s otoGar3.GL873542 22789401 192 + 22939663 CTGGCTCAGTCATGGGGAGCTGCTTCCTGTGGCTTAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCGCAGCTGCTAATTGCACCATAAACA-TTTTTCATCAAGCAATTGCTGTTTACTCATTTGCCAAT------------CAACTACCTCTACT--GGCTCCTGC-CTCCCCACTTCCCAAATCCTGCTGTTTCCA- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181749314 195 + 182113224 -CTGCTCAGTCATAGAGAACCATTTCGTGTGGCTCAACCAGTTCACAACAAACACAG--GAAACTTTATTTATGGAACAGCTGCTAATTGCACTGCAAACA-TTTTTCATCAAGCAATTGCTGTTTACTAGTTTGCCAATCAGCTCATTATCCATTTACCTCTCCC--A--TTTTGC-TTTCCTGCTGTTTTGATTCTCCTGCA----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47561585 201 + 47698779 ----CTCAATCA--GGGAGCTGTTTCC-GTGGCTCAACAAGTTTATAATAAACACAGTTAAACTTTTATTTATGGCACAGCTGCTAATTGCACCATAAACA-TTTTTCATCAAGCAATTGCTGTTTACTCATTTGCCAATCAGCTCATTATCCAGCTACCTTCCCCGACGCTCCCGAGACTCCCACCTCCCAAGTCCTGCTGTTTGTCA i canFam3.chr24 C 0 I 4 s dasNov3.JH569290 195000 188 - 397369 CTGGCTCAGTCA-TGAGAACAGTTTCCTGTGGCTCAACAAGTTTATAATAA--AGAGCTAAACTTTTATTTATGACACAGCTGCTAATTGCACCATAAGCAGTTTTCCATCAGGGAGTTGCAG-TTACTCATTAGCCAGTCAGCTCGTGATCCGGCCACC---CCA--GGCCCCTTC-----------CCAAAGTCTTGTTGGTCTAA- i dasNov3.JH569290 C 0 C 0 a score=98125.000000 s hg38.chr20_KI270870v1_alt 51597 10 + 183433 GGCGTCCCTC-- s panTro5.chr20 66376606 10 + 66533130 GGCGTCCCTC-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057342 10 + 62195757 GGCGTCCCTC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442711 10 - 578057 GGCGTCCCTC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969257 10 - 110113093 GGCGTCCCTC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92696998 10 - 92844088 GGCGTCCCTC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364352 10 + 96509753 GGCGTCCCTC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834164 10 - 16982598 GGCGTCCCTC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637218 10 - 3785965 GGCGTCCCTC-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258941 10 - 90373283 GGCGTCCCTC-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16104 10 - 179258 GGCGTCCCTC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510007 10 - 5823884 GGCGTCCCTC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163361 10 + 159171411 GGCATCCCCC-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16228725 10 + 16356641 GGCATCCCCC-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096026 10 + 1231380 AGCATCCCCC-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625359 9 + 11732439 GGCGT-CCCC-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22789593 9 + 22939663 -GCGACTCCC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181749509 10 + 182113224 GGTGTCCTCC-- i mm10.chr2 C 0 I 721 s canFam3.chr24 47561790 6 + 47698779 ---GGCCCC--- i canFam3.chr24 I 4 C 0 s dasNov3.JH569290 195188 10 - 397369 --TGGTTCTCGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811263 118 - 2029793 I e micMur3.chr18 56804855 115 + 57149010 I a score=1423913.000000 s hg38.chr20_KI270870v1_alt 51607 172 + 183433 -TGCAACTGTACCCCCACCCAACTGCCTGGCCTGACTCCTGGC-AGGTA-GGCCCCCTCTCCAGTCCGCCCAGGCTTTGGTAGGTGTGCCTGCCCAGGCTAGGCTCTGTTCTGCTGCT---GACCATGGCCAGCCCCGACTGTCCAGCATCCTAGTGTTTGAGG-CCCTGAACAATGCC s panTro5.chr20 66376616 172 + 66533130 -TGCAACTGTACCCCCACCCAACTGCCTGGCCTGACTCCTGGC-AGGTA-GGCCCCCTCTCCAGTCCGCCCAGGCTTTGGTAGGTGTGCCTGCCCAGGCTAGGCTCTGTTCTGCTGCT---GACCATGGCCAGCCCCGACTGTCCAGCATCCTAGTGTTTGAGG-CCCTGAACAATGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057352 172 + 62195757 -TGCAACTGTACCCCCACCCAACTGCCTGGCCTGACTCCTGGC-AGGTA-GGCCCCCTCTCCAGTCCGCCCAGGCTTTGGTAGGTGTGCCTGCCCAGGCTAGGCTCTGTTCTGCTGCT---GACCATGGCCAGCCCCGACTGTCCAGCATCCTAGTGTTTGAGG-CCCTGAACAATGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442721 172 - 578057 -TGCAACTGTACCCCCACCCAGCTGCCTGGCCTGACTCCTGGC-AGGTA-GGCCCCCTCTCCAGTCCGCCCAGGCTTTGGTAGGTGTGCCTGCCCAGGCTAGGCTCTGTTCTGCTGCT---GACCATGGCCAGCCCCGACTGTCCAGCATCCTAGTGTTTGAGG-CCCTGAACAATGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969267 171 - 110113093 -TGCAACTGTCCCCCCACCCAGCTGCCTGGCCTGACTCCTGGC-AGGTA-GGCCCCCTCTCCAGTCCGCCCAGGCTTT-GTCGGTGTGCTTGCCCAGGCGGGGCTCTGTTCTGCTGCT---GACCACGGCCAGCCCCGACCATCCAGCACCCTAGTGTTTGAGG-CCCTGGACAGTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697008 166 - 92844088 -TGCAACTGTCCCCCCACCCAGCTGCCTGGCCTGCCTCCTGGT-GTTTG-AGGCCCT------GTCTGCCCAGGCTGTGGTAGGTGTGCCTGCCCAGGCTCGGCTCTGTTCTACTGCT---GCCCATGGCCAGCCCCGACTGTCCAGCATCCTGGTGTTTGAGG-CCCTGAACAATGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364362 142 + 96509753 -TGCAACTGTCCCCCCACCCAGCTGCCTGGCCTGCCTCCTGGT-GTTTG-AGGCCC------------------------------TGCCTGCCCAGGCTCGGCTCTGTTCTACTGCT---GCCCATGGCCAGCCCCGACTGTCCAGCATCCTGGTGTTTGAGG-CCCTGAACAATGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834174 142 - 16982598 -TGCAACTGTCCCCCCACCCAGCTGCCTGGCCTGCCTCCTGGT-GTTTG-AGGCCC------------------------------TGTCTGCCCAGGCTCGGCTCTGTTCTACTGCT---GCCCATGGCCAGCCCCGACTGTCCAGCATCCTGGTGTTTGAGG-CCCTGAACAATGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637228 166 - 3785965 -TGCAACTGTCCCCCCACCCAGCTGCCTGGCCTGCCTCCTGGT-GTTTG-AGGCCCT------GTCTGCCCAGGCTGTGGTAGGTGTGCCTGCCCAGGCTTGGCTCTGTTCTGCTGCT---GCCCATGGCCAGCCCCAACTGTCCAGCATCCTGGTGTTTGAGG-CCCTGAACAATGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90258951 166 - 90373283 -TGCAACTGTCCCCCCACCCAGCTGCCTGGCCTGCCTCCTGGT-GTTTG-AGGCCCT------GTCCGCCCAGGCTTTGGTAGGTGTGCCTGCCCAGGCTAGGCTCTGTTCTGCTGCT---GCCCATGGCCAGCCCCGACTGTCCAGCATCCTGGTGTTTGAGG-CCCTGAGCAATGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16114 166 - 179258 -TGCAACTGTCCCCCCACCCAGCTGCCTGGCCTGCCTCCTGGT-GTTTG-AGGCCCT------GTCTGCCCAGGCTGTGGTAGGTGTGCCTGCCCAGGCTTGGCTCTGTTCTGCTGCT---GCCCATGGCCAGCCCCGACTGTCCAGCATCCTGGTGTTTGAGG-CCCTGAACAATGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510017 171 - 5823884 -TGC-ACTGTCCCCCCACCCAGCTGCCTGGCCTGCCTCCTGGCAGATTG-GCCCCCT-CTCCAGTCCGCCCAGGCTTTGGTAGGTGTGCCTGCCCAGGCTAGGCTCTGTTCTGCTGCT---GCCCATGGCCAGTCCCGACTGTCCAGCATCCTGGTGTTTGAGG-CCCTGAACAATGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163371 173 + 159171411 -TGCAAGTGTCCTCCCACCCGGCTGCCTGGCCTGCCTCCTGGG-AGGTTGGGCCCCCTCTCCATCCCACCCAGGCTTTGGTAGATGTGCCTGCCCAGGTGAAGCTCTGTTCTACAGCA---GCCCATGGCCAGCCCTGACTGTCCAGCATCCTGGTGACTGAGG-CCCTGAACTAGGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16228735 171 + 16356641 -TGCAACGGTCCTCCCACCCGGCTGCCTGGCCTGCCTCCTGGG-AGACT-GGCCCCCTCTCCAGCCCACCTGGGCTTTGGCAGATGTGCCTGCCCAGGCGAAGCTCTGTTCTGCAGCA---GCCCATCGCCAGCCCTGACTGTCCAGCGTCCTGGTGGCTGAGG-CCCTGAAC-AGGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096036 173 + 1231380 -TGCAACTGTCCTCCCACCCGGCTGCCTGGCCTGCCTTCTGGG-AGGTT-GGCCCCCTCTCCAGCCCACCTGGGCTTTGGCAGATGTGCCTGCCCAGGCGAAGCTCTGTTCTGCAGCA---GCCCATGGCCAGCCCCGACTGTCCAGCATCCTGGTGGCTGAGGCCCCTTAACTAGGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625368 170 + 11732439 -TGCAGCTGTCCTCCCACCCGGCTGCCCGGCCTGCCTCCTGGG-AGGCT--GCCCCCTCTCCAGCCCACCTGGGCTTTGGCAGATGTGCCTGCCCAGGCGAAGCTCTGTTCTGCAG-A---GCCCATGGCCAGCCCCGACTGTCCATCATCCTGGTGACTGAGG-CCCTGAAGTAGGGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22789602 140 + 22939663 -TGCAGCTGTCCCCCAGACTGTCTGCCTGGCCCGCCTCCTGGC-AGCTG-GTCCCCT-----------------CTCTG--------GGCTGCTCAG-----GCTCTGTCCTGCTGCT---CCCCAAGGCTGGCCCCAACTGCCCAGTATCCTAGCACTCAAAG-CCCTG-GTGATGC- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47561796 134 + 47698779 -TGCAGCTGTCCCCCGGCCCCGC-------CCTCCCACATCTC-GGCCA-GGCCACC------GCCCCCCTGCA-------------GCCTGC-CAGGCCCTGCGC-GTCCTGCCGCC-----------CCTGCCCCACAAGAC--GCAGCGAGGCTGGCCAGG-CCCCCGGGAACAGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 195198 122 - 397369 TGACAGTTGTTCCCCAG---GGCGCCCTGGCCCCGGCCCTGCT--CACG-TGCTCCT------GCCGGCC----------------TGCCTGCC-------GGCCGCGGCCTGCTGCCCTGAGCTACGGCGTCCGCAGGCT-TCCTGCGGCC---------AGG-TCC----------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811263 118 - 2029793 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56804855 115 + 57149010 I a score=16511.000000 s hg38.chr20_KI270870v1_alt 51779 1 + 183433 C s panTro5.chr20 66376788 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057524 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442893 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969438 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697174 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364504 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834316 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637394 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259117 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16280 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510188 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163544 1 + 159171411 C i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16228906 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096209 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625538 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56804970 1 + 57149010 C i micMur3.chr18 I 115 C 0 s otoGar3.GL873542 22789742 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47561930 1 + 47698779 C i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 195320 1 - 397369 C i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811263 118 - 2029793 I e mm10.chr2 181749519 721 + 182113224 I a score=602980.000000 s hg38.chr20_KI270870v1_alt 51780 57 + 183433 CTGCTGGGCTCT--CCTGACCA--CTCTTTTCTCTGGCTCCCAAACCTCACGGCCCCTGGG s panTro5.chr20 66376789 57 + 66533130 CTGCTGGGCTCT--GCTGACCA--CTCTTTTCTCTGGCTCCCAAACCTCACGGCCCCTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057525 57 + 62195757 CTGCTGGGCTCT--GCTGACCA--CTCTTTTCTCTGGCTCCCAAACCTCACGGCCCCTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442894 56 - 578057 CTGCTGGGCTCT--CCTGACCA--CTCTTTTCTCTGGCTCCCAAA-CTCACGGCCCCTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969439 57 - 110113093 GTGCTGGGCTCT--CCTGACCA--CTCTTTTCTCTGGCTCCCAAACCTCATGGCCCCTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697175 52 - 92844088 CTGCTGGGCTCT--CCTGACCA--CTCTTTTCTCTGGCTCC-----CTCACGGCCCCTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364505 52 + 96509753 CTGCTGGGCTCT--CCTGACCA--CTCTTTTCTCTGGCTCC-----CTCACGGCCCCTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834317 52 - 16982598 CTGCTGGGCTCT--CCTGACCA--CTCTTTTCTCTGGCTCC-----CTCACGGCCCCTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637395 52 - 3785965 CCGCTGGGCTCT--CCTGACTA--CTCTTTTCTCTGGCTCC-----CTCACGGCCCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259118 52 - 90373283 CTGCTGGGCTCT--CCTGACCA--CTCTTTTCTCTGGCTCC-----CTCACAGCCCCTGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16281 52 - 179258 CCGCTGGGCTCT--CCTGACCA--CTCTTTTCTCTGGCTCC-----CTCACGGCCCCTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510189 52 - 5823884 CTGCTGGGCTCT--CCTGACCA--CTCTTTTCTCTGGTTTC-----CTCACGGCCCCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163545 48 + 159171411 TTGCTGGGCCCT--CCTGACCA--CTCTTTTCTCCGGCTATGAAACCTCACG--------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16228907 48 + 16356641 CTGCTGGGCCCT--CCTGACCA--CTCTCTTCTCTGGCTACGAAACCTCACA--------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096210 48 + 1231380 CTGCTGGGCCCT--CCTGACCA--CTCTCTACTCTGGCTACGAAACCTCACG--------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625539 48 + 11732439 CTGCCGGGCCCT--CCTGACCA--CTCTCTTCTCCAGCTACGAAACCTCATG--------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56804971 54 + 57149010 CTGCTGGG-CCT--CCCGACCA----CTCTCCTCTGGCTCCCAAACCTCACAGCCTCTGGG i micMur3.chr18 C 0 I 252 s proCoq1.NW_012150197v1 1811381 55 - 2029793 CTGCTGGGCCCT--CCTGACCA----CTCTCTTCTGGCTCCCAAACCTCGCAGCCTCTGGG i proCoq1.NW_012150197v1 I 118 C 0 s otoGar3.GL873542 22789743 58 + 22939663 GTGCTGGA-CAT--CCTGACCACTCTCTCTCTTCTGGCTCCTAAACCTCATAGCCTCTAGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47561931 48 + 47698779 ---CTGCTCTCTGCCCTGACCG--CTCCTCCCCTCGGCTCC--------TCAGCCCCCAGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 195321 47 - 397369 --------CTGT--CCTGACCA----CCCTCCTCTGGCTCCGGGGCCTCCCAGCTCCAGGT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181749519 721 + 182113224 I a score=139039.000000 s hg38.chr20_KI270870v1_alt 51837 17 + 183433 GATCCTCGCCTCCCTCT s panTro5.chr20 66376846 17 + 66533130 GATCCTCACCTCCCTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057582 17 + 62195757 GATCCTCGCCTCCCTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442950 17 - 578057 GATCCTCACCTCCCTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969496 17 - 110113093 GATCCTCGCCTCCCTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697227 17 - 92844088 GATCCTTGCCTCCCTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364557 17 + 96509753 GATCCTTGCCTCCCTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834369 17 - 16982598 GATCCTTGCCTCCCTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637447 17 - 3785965 GATCCTTGCCTCCCTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259170 17 - 90373283 GATCCTTGCCTCCCTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16333 17 - 179258 GATCCTTGCCTCCCTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510241 17 - 5823884 GATCCTTGCTTCCCTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163593 9 + 159171411 --------CCTCCCTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16228955 9 + 16356641 --------CCTCCCTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096258 9 + 1231380 --------CCTCCCTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625587 9 + 11732439 --------CCTCCCTCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1811436 17 - 2029793 CAGGCTCACCTCCCTCT i proCoq1.NW_012150197v1 C 0 I 225 s canFam3.chr24 47561979 13 + 47698779 ---GCGGGCCGCACCC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 195368 15 - 397369 GAGCCTCTTCTCCCT-- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805025 252 + 57149010 I e otoGar3.GL873542 22789801 0 + 22939663 C a score=1875749.000000 s hg38.chr20_KI270870v1_alt 51854 207 + 183433 TTTCCTGCGTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCCCCACCCATCTCTCTCCTAGACCAGGGGTTACATAAAACTTAAGCCAGTGTTCCTGAGGGTCCTTCCTTTCCTTAAGAGGGAGCGTGTTCCGAATACTCAACTCCTGCCGCTTGTTTGCTGG-GTTCAGTGT----GGCCCCTC----GCTCACCATTACCTCGCAGAGCA s panTro5.chr20 66376863 207 + 66533130 TTTCCTGCGTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCCCCACCCATCTCTCTCCTAGACCAGGGGTGACATAAAACTTAAGCCAGTGTTCCTGAGGGCCCTTCCTTTCCTTAAGAGGGAGCGTGTTCCGGATACTCAACTCCTGCCGCTTGTTTGCTGG-GTTCAGTGT----GGCCCCTC----GCTCACCATTACCTCACAGAGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057599 207 + 62195757 TTTCCTGCGTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCCCCACCCATCTCTCTCCTAGACCAGGGGTGACATAAAACTTAAGCCAGTGTTCCTGAGGGCCCTTCCTTTCCTTAAGAGGGAGCGTGTTCCGGATACTCAACTCCTGCCGCTTGTTTGCTGG-GTTCAGTGT----GGCCCCTC----GCTCACCATTACCTCACAGAGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 442967 206 - 578057 TTTCCTGCGTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCCCCACCCATCTCTCTCCTAGACCA-GGGTTACATAAAACTTAAGCCAGTGTTCCTGAGGGTCCTTCCTTTCCTTAAGAGGGAGCGTGTTCCGAATACTCAATTCCTGCCGCTTGTTTGCTGG-GTTCAGTGT----GGCCCCTC----GCTCACCATTACCTCACAGAGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969513 207 - 110113093 TTTCCTGCGTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCCCCACCCATCTCTCTCCTAGACCAGGGATTACGTAAAACTTAAGCCAGTGTTTCTGAGGGTCCTTCCTTTCCTTAAGAGGAAGCATGTTCCGAATACTCAACTCCTGCCACTTGTTTGCTGG-GTTCAGTGT----GGCTCCTC----GCTCACCACTACCTCACAGAGCA i nomLeu3.chr13 C 0 M 100 s rheMac8.chr10 92697244 207 - 92844088 TTTCCTGCCTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCACCACCCATCTCTCTCCTAGACCAGGGATTGCATAAAACTTAAGCCAGTGTTCCTGAGGGTCCTTCCTTTCCTTAAGAGGGAGCATGTTCCGAATAGTCAACTCCTTCCACCTGTTTGCTGG-ATTCAGTGTC---AGCTCCTC----GCTCA-CACTACCCCACAGAGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364574 207 + 96509753 TTTCCTGCCTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCACCACCCATCTCTCTCCTAGACCAGGGATTGCATAAAACTTAAGCCAGTGTTCCTGAGGGTCCTTCCTTTCCTTAAGAGAGAGCATGTTCTGAATAGTCAACTCCTTCCACCTGTTTGCTGG-ATTCAGTGTC---AGCTCCTC----GCTCA-CACTACCCCACAGAGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834386 207 - 16982598 TTTCCTGCCTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCACCACCCATCTCTCTCCTAGACCAGGGATTGCATAAAACTTAAGCCAGTGTTCCTGAGGGTCCTTCCTTTCCTTAAGAGGGAGCATGTTCCGAATAGTCAACTCCTTCCACCTGTTTGCTGG-ATTCAGTGTC---AGCTCCTC----GCTCA-CACTACCCCACAGAGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637464 207 - 3785965 TTTCCTGCCTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCACCACCCATCTCTCTCCTAGACCAGGGATTGCATAAAACTTAAGCCAGTGTTCCTGAGGGTCCTTCCTTTCCTTAAGAGGGAGCATGTTCCGAATAGTCAACTCCTTCCACCTGTTTGCTGG-ATTCAGCGTC---AGCTCCTC----GCTCA-CACTACCCCACAGAGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259187 206 - 90373283 TTTCCTGCCTTTATCCCAGCCCCACTCAGCATGCCCGGAGGTCT-ACCACCCATCTCTCTCCTAGACCAGGGATTGCATAAAACTTAAGCCAGTGTTCCTGAGGGTCCTTCCTTTCCTTAAGAGGGAGCACGTTCCGAATAGTCAACTCCTTCCACCTGTTTGCTGG-ATTCAGTGTC---AGCTCCTC----GCTCA-CACTACCCCACAGAGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16350 207 - 179258 TTTCCTGCCTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCACCACCCATCTCTCTCCTAGACCAGGGATTGCATAAAACTTAAGCCAGTGTTCCTGAGGGTCCTTCCTTTCCTTAAGAGGGAGCATGTTCCGAATTGTCAACTCCTTCCACCTGTTTGCTGG-ATTCAGTGTC---AGCTCCTC----GCTCA-CACTACCCCACAGAGCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510258 207 - 5823884 TTTCCTGCCTTTATCCCAGCCCCACTCAGCATGCCCAGAGGTCTCACCACCCATCTCTCTCCTAGACCAGGGATTACAAAAAACTTAAGCCAGTGTTCCTGAGGGTCCTTTCTTTCCTTAAGAGGGAGCATGTTCCGAATAGTCAACTCCTTCCACCTGTTTGCTGG-GTTCAGCATC---AGCTCCTC----GCTCA-CACTACCTCACAGAGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163602 199 + 159171411 TTCCCTGCCTTTATTCCAGCCCCCCTCAGCTTGCCCAGAGGTCTCCCCACCCATCTCTCTACTACGCCAGGGATTACATGAAACTGA----AGGGCTCCTGAGGGCCCTTCCTCTCCTTTAGAGGGAGCGTG-TTGGAATACTCAACTCCTGCTGCGTGTTTGCTGG-TTT--CTGTC---AGCTCCTC----GCTCA-C-CTACCTCGAAGAGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16228964 203 + 16356641 TTCCCTGCCTTTATCCCAGCCCCCCTCAGCTTGCCCAGAGGTCTCCCCACCCATCTCTCTAGTAGGCCATGGATTACATGAAACTGAAGCCAGTGCTCCTGAGGGCCCTTCCTTTCCTTAAGAGGGAGCATG-TCGGAATACTCAACTCCTGCTGTGTGTTTGCTGG-TTT--GTGTC---AGCGCCTC----GCTCA-C-CTACCTCGAAGAGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096267 203 + 1231380 TTCCCCGCCTTTATCCCAGCCCCACTCAGATTACCCAGAGGTCTCCCCACCCATCTCTCGACTAGGCCATGGATTACGTGAGACTGAAGCCAGTGCTCCTGAGGGCCCTCCCTTTCCTTAAGAGGGAGCGTG-TCAGAATACTCAACTCCTGCTGCGTGCTTGCTGG-TTT--GTGTC---AGCTCCTC----GCTTA-C-CTACCTCGAAGAGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625596 201 + 11732439 TTCCCTGCCTTTATCGCAGCCCCCCTCAGCTTGCCCAGAGGTCTCCCCACCCATCTCT--ACTAAGCCGGGGATTACATGAAACTGAAGCCAGTACTCCTGAGGGCCCTTCCTTTCCTTAAGAGGGAGCGTG-TGGGAATACTCAGCTCCTGCTGCGTGTTTGCTGG-TTT--GTGTC---AGCTCCTC----GCTCG-C-CCACCTCGAAGAGCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22789801 154 + 22939663 ---TCTGCCTTTATCCCAGCCCCACCCAG-------------------------CTCTTTACATGACCAGGAATCACACATAGCTCATACCTGTGTCCCTGAGGGC--------------------AGCCCATTCC------TCAACTCCTGCCACTTGTTTGCTGGTGTCCAGGGCA---GGTTTTGC----ACTCA-CAGTGTCTCCCAGAGTT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47561992 167 + 47698779 -------------------ACCCACGCAGCCCCCCC--------TCCCCGGCATCTCTCAGCGGCCCTGGGAGTCGCCAAGGACTGAACCGCGGGCTCCCTGAGGTCACTGCTGTCCTT------GTGCGCGTCCTG--TCCGCAAGCCCCA----------GCTGG-CTCGTACGCCCAGGGCTTCCC--ATGCTCT-GGGGGCCTCGCAGGGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 195383 145 - 397369 ------------------------CTCGGCTTGCTGAGACGCC------CCCGTCTCT---CAAGGCCAGGAACTGAGTAACGCTTGACCCTTCGCCCCCGAGGTTCCCGACACCCC-------------------------CCTGCTCCTGC----TGGCTCCTGG-A----GCGGC---AGCCCCCCAGAGGCTCC-TCAGCCCAGGCAGGACG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811453 225 - 2029793 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805025 252 + 57149010 I a score=80730.000000 s hg38.chr20_KI270870v1_alt 52061 8 + 183433 CTGAGACA s panTro5.chr20 66377070 8 + 66533130 CTGAGACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057806 8 + 62195757 CTGAGACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443173 8 - 578057 CTGAGACA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92697451 8 - 92844088 CTGAGACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364781 8 + 96509753 CTGAGACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834593 8 - 16982598 CTGAGACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637671 8 - 3785965 CTGAGACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259393 8 - 90373283 CTGAGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16557 8 - 179258 CTGAGACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510465 8 - 5823884 CTGAGACG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163801 8 + 159171411 CTGAGACA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229167 8 + 16356641 CTGAGACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096470 8 + 1231380 CTGAAACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625797 8 + 11732439 CTGAGACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22789955 8 + 22939663 GTGAGACA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562159 8 + 47698779 TTGGGGCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 195528 3 - 397369 -TGG---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811453 225 - 2029793 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805025 252 + 57149010 I e nomLeu3.chr13 109969720 100 - 110113093 M a score=546195.000000 s hg38.chr20_KI270870v1_alt 52069 66 + 183433 GAGCTTACACTTACTCATACCTTGGTTCATTGGTTCA--CCCGACCATGGCCACCTCC---ACACAGGTCA----------------------- s panTro5.chr20 66377078 66 + 66533130 GGGCTTACACTTACTCATACCTTGGTTCATTGGTTCA--CCCGACCATGGCCACCTCC---ACACAGGTCA----------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057814 66 + 62195757 GGGCTTACACTTACTCATACCTTGGTTCATTGGTTCA--CCCGACCATGGCCACCTCC---ACACAGGTCA----------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443181 66 - 578057 GGGCTTACACTTACTCATACCTTGGTTCATTGGTTCA--CCCGACCATGGCCACCTCC---ACACAGGTCA----------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969820 66 - 110113093 GGGCTTACACTTACTCATACCTTGGTTCTTTGGTTCA--CCCGACCATGGCCACCTCC---ACACAGGTCT----------------------- i nomLeu3.chr13 M 100 C 0 s rheMac8.chr10 92697459 62 - 92844088 GGGCTTACACTTACTCATACCTTGGTGCATTGGTTCA--CCTGACCATGGCAACCTCC---ACACAG--------------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364789 62 + 96509753 GGGCTTACACTTACTCATACCTTGGTGCATTGGTTCA--CCTGACCATGGCAACCTCC---ACACAG--------------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834601 62 - 16982598 GGGCTTACACTTACTCATACCTTGGTGCATTGGTTCA--CCTGACCATGGCAACCTCC---ACACAG--------------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637679 66 - 3785965 GGGCTTACACTTACTCATACCTTGGTGCATTGGTTCA--CCTGACCATGGCAACCTCC---ACACAGGTCA----------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259401 66 - 90373283 GGGCTTACACTTACTCATACCTTGGTGCATTGGTTCA--CCTGACCATGGCAACCTCC---ACACAGGTCA----------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16565 66 - 179258 GGGCTTACACTTACTCATACCTTGGTGCATTGGTTCA--CCTGACCATGGCAACCTCC---ACACAGGTCA----------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510473 66 - 5823884 GGGCTTGCACTTACTCATACCTTGGTGCATTGGTTCA--CCTGACCATGGCAACCTCC---ACACGGGTCA----------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163809 68 + 159171411 GGGCTTGCCCTAATTCATACCTTGGTTCATTGGTTCA--CACAGCCATGGCCACCTCCTGTGT-GGGGCCA----------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229175 69 + 16356641 GGGCTTGCCCTGATTCATACCTTGGTTCATTGGTTCA--CATAGCCATGGCCGCCTCCCGTGTGGGGGCCA----------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096478 69 + 1231380 GGGCTTGCCCTAATTCATACCTTGCTTCATTGGTTCA--CACAGCCATGGCCACCTCCTGTGTGGGGGCCA----------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625805 69 + 11732439 GGACTTGCCCTAATTCATACCTTGGTTCATTGGTTCA--CACAGCCATGGCCACCTCCTGTGTGGGGGCCA----------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22789963 53 + 22939663 -GGCTCACACTT------------GTCCATGGGCTCA--TGCAACTGTGGCCACCTCC---TTTGGGGACA----------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562167 63 + 47698779 -GCCTCACGTGTGCTCCTGTTTGTGCACAATCCCTCAGGCTCGACCGTTCCCAGTGAC---AGGACG--------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 195531 94 - 397369 GGTCTTGCATTTGCTCATACCTTGCTTTTTCATTAAAAACACAGACTTGGACCCCGCCTGTGTGGGGGGCACTGTGAATCCTCCTCCCAGACCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811453 225 - 2029793 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805025 252 + 57149010 I a score=142242.000000 s hg38.chr20_KI270870v1_alt 52135 16 + 183433 TGGTGTGAGTCGCCTC-- s panTro5.chr20 66377144 16 + 66533130 TGGTGTGAGTCGCCTC-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057880 16 + 62195757 TGGTGTGAGTCGCCTC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443247 16 - 578057 TGGTGTGAGTCCCCTC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969886 16 - 110113093 TGGTGTGAGTCCCCTC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697521 14 - 92844088 --GTGTGCGTCCCCTT-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364851 14 + 96509753 --GTGTGCGTCCCCTT-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834663 14 - 16982598 --GTGTGAGTCCCCTT-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637745 16 - 3785965 TCGTGTGAGTCCCCTT-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259467 16 - 90373283 TCGTGTGAGTCCCCTT-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16631 16 - 179258 TCGTGTGAGTCCCCTT-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510539 16 - 5823884 TCGTGTGAGTCCCCTT-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163877 16 + 159171411 TGATGTGAGTCCGCTA-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229244 16 + 16356641 TGATGTGAGTCTGCTC-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096547 16 + 1231380 TGATGTGAATCCACTC-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625874 16 + 11732439 TGATGTGAGTCCACTC-- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1811678 16 - 2029793 TGGTGTGAGCCCCCTT-- i proCoq1.NW_012150197v1 I 225 C 0 s otoGar3.GL873542 22790016 10 + 22939663 TGGTATGAGT-------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562230 16 + 47698779 TGGTGGGAACCCCTTC-- i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 195625 17 - 397369 -GGTGCCAGCCGGCCACC i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805025 252 + 57149010 I a score=594239.000000 s hg38.chr20_KI270870v1_alt 52151 51 + 183433 CCCCCAT-----GTTCCCTCTGC---------------AGAGCTGGCTCCAGGAT---------------------GAGCCTGAGCTGGGAG s panTro5.chr20 66377160 51 + 66533130 CCCCCAT-----GTTCCCTCTGC---------------AGAGCTGGCTCCAGGAT---------------------GAGCCTGAGCTGGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057896 51 + 62195757 CCCCCAT-----GTTCCCTCTGC---------------AGAGCTGGCTCCAGGAT---------------------GAGCCTGAGCTGGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443263 51 - 578057 CCCCCAT-----GTTCCCTCTGC---------------AGAGCTGGCTCCAGGAT---------------------GAGCCTGAGCTGGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969902 51 - 110113093 CCCCCAT-----GTTCCCTCTGC---------------AGAGCTGGCTCCAGGAT---------------------GAGCCTGAGCTGGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697535 56 - 92844088 CCCCCGTGCAGAGTTCCCTCTGC---------------AGAGCCGGCTCCAGGGT---------------------GAGCCTGAGCTGGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364865 56 + 96509753 CCCCCGTGCAGAGTTCCCTCTGC---------------AGAGCCGGCTCCAGGGT---------------------GAGCCTGAGCTGGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834677 56 - 16982598 CCCCCGTGCAGAGTTCCCTCTGC---------------AGAGCCGGCTCCAGGGT---------------------GAGCCTGAGCTGGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637761 56 - 3785965 CCCCCGTGCAGAGTTCCCTCTGC---------------AGAGCCGGCTCCAGGGT---------------------GAGCCTGAGCTGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259483 51 - 90373283 CCCCCAT-----GTTCCCTCTGC---------------AGAGCCGGCTCCAGGGT---------------------GAGCCTGAGCTGGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16647 56 - 179258 CCCCCGTGCAGAGTTCCCTCTGC---------------AGAGCCGGCTCCAGGGT---------------------GAGCCTGAGCTGGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510555 51 - 5823884 CCCCCGT-----GTTCCCTCTGC---------------AGAGCGGGCTCCAGGGT---------------------GAGCCTGAGCTGGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163893 51 + 159171411 TCCCTAT-----GTTCCCTCTGC---------------AGGGCCTATTCTGGGGT---------------------GAGCCTGAGCTGGGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229260 51 + 16356641 TCCCTAC-----GTTCCCTCTGC---------------AGGGCCTGCTCTGGGGT---------------------GACCCTGAGCTGGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096563 51 + 1231380 TCCCTAT-----GTTCCCTCTGC---------------AGGGCCTGCTCTGGGGT---------------------GAGCCTGAGCTGGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625890 51 + 11732439 TCCCTAC-----GTTCCCTCTGC---------------AGGGTCTGCTCTGGGGT---------------------GAGCCTGAGCTGGGAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56805277 51 + 57149010 CCCCCAT-----GCCCCCTCTGC---------------AGGGCCAGCCCCAGGGT---------------------GAGCCTGAGCTGGGAG i micMur3.chr18 I 252 I 62 s proCoq1.NW_012150197v1 1811694 51 - 2029793 CCCCCAT-----ATCCCCTCTGC---------------AGGGCCAGCCCGAGGGT---------------------GAGCCTGAGCTGGGAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22790026 22 + 22939663 ----------------------------------------------TCCCAGGGT---------------------GATTCC---CTGGGAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562248 87 + 47698779 CCCCTGC-----GCCACCGCTGCCCTCACGCCCTCCTGCCCGCAGCCCCTCGGGCCCTTGGCAGCCTGGCCACCCAGGGCTCAGGCCGGTGG i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 195642 44 - 397369 TCCTCCT-----GCCCCTCCCTC---------------TGGGCTGGCT-----GC---------------------AGGCCTGAGCCGGG-- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181749519 721 + 182113224 I a score=289557.000000 s hg38.chr20_KI270870v1_alt 52202 25 + 183433 ATCCTCTGGATGGAAGGAAGTTCCA s panTro5.chr20 66377211 25 + 66533130 AGCCTCTGGATGGAAGGAAGTTCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057947 25 + 62195757 AGCCTCTGGATGGAAGGAAGTTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443314 25 - 578057 AACCTCTGGATGGAAGGAAGTTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969953 25 - 110113093 ATCCTCTGGATGGAAGGAAGTTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697591 25 - 92844088 ATCCTCTGGATGGAAGGAAGTTCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364921 25 + 96509753 ATCCTCTGGATGGAAGGAAGTTCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834733 25 - 16982598 ATCCTCTGGATGGAAGGAAGTTCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637817 25 - 3785965 ATCCTCTGGATGGAAGGAAGTTCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259534 25 - 90373283 ATCCTCTGGATGGAAGGAAGTTCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16703 21 - 179258 ATCCTCTGGAT----GGAAGTTCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510606 25 - 5823884 ATCCTCTGGATGGAAGGAAGTTCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163944 25 + 159171411 ATCTTCTGGATGGAAGGAAGTTACA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229311 25 + 16356641 ATCTTCTGGTTGGAAGGAAGTTCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096614 25 + 1231380 ATCTTCTGGATGGAAGGAAGTTCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625941 25 + 11732439 ATCTTCAGGATGGAAGGAAGTTCCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1811745 24 - 2029793 GGCCTC-AGGTGGAAGGAAGTCCCA i proCoq1.NW_012150197v1 C 0 I 714 s otoGar3.GL873542 22790048 25 + 22939663 GTCCTCTGGGTGGCAAGATGTCCCA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562335 25 + 47698779 CTCCTCTGGGGGAACAGACCCCTCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 195686 12 - 397369 -----CCTGATGGTAGG-------- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805328 62 + 57149010 I a score=150427.000000 s hg38.chr20_KI270870v1_alt 52227 12 + 183433 CCCTGTATCCAG s panTro5.chr20 66377236 12 + 66533130 CCCTGTATCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057972 12 + 62195757 CCCTGTATCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443339 12 - 578057 CCCTGTATCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969978 12 - 110113093 CCCTGTATCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697616 12 - 92844088 CCCTGTATCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364946 12 + 96509753 CCCTGTATCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834758 12 - 16982598 CCCTGTATCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637842 12 - 3785965 CCCTGTATCCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259559 12 - 90373283 CCCTGTATCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16724 12 - 179258 CCCTGTATCCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510631 12 - 5823884 CCCTGTATCCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163969 12 + 159171411 CCCTATATCTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229336 12 + 16356641 CCCTGTATCCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096639 12 + 1231380 CCCTGTATCCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625966 12 + 11732439 CCCTGTATCCAG i aotNan1.NW_018500483v1 C 0 I 20 s otoGar3.GL873542 22790073 12 + 22939663 CCCTGTGCCCAA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562360 11 + 47698779 -CCCGGACCTGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805328 62 + 57149010 I e dasNov3.JH569290 195698 0 - 397369 C a score=171063.000000 s hg38.chr20_KI270870v1_alt 52239 21 + 183433 TTACTGTGACACCTG-CCCCCC s panTro5.chr20 66377248 21 + 66533130 TTACTGTGACACCTG-CCCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62057984 22 + 62195757 TTACTGTGACACCTGCCCCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443351 20 - 578057 TTACTGTGACACCTG--CCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109969990 21 - 110113093 TTACTGTGACACCTG-CCCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697628 20 - 92844088 TTACTGTGACACCTG--CCCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364958 20 + 96509753 TTACTGTGACACCTG--CCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834770 20 - 16982598 TTACTGTGACACCTG--CCCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637854 20 - 3785965 TTACTGTGACACCTG--CCCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259571 20 - 90373283 TTACTGTGACACCTG--CCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16736 20 - 179258 TTACTGTGACACCTG--CCCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510643 20 - 5823884 TTACTGTGACACCTG--CCCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58163981 19 + 159171411 -TACCATGAATCCTG--CCCCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229348 19 + 16356641 -TACCGTGAATCCTG--CCCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096651 19 + 1231380 -TACCATGAACCCTG--CCCCC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22790085 20 + 22939663 TTACTGAGATACTCA--CCTCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562371 20 + 47698779 GCACCGTGACCCCTG--CCCCC i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 195698 8 - 397369 -TGCTGCGG------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805328 62 + 57149010 I e aotNan1.NW_018500483v1 2625978 20 + 11732439 I a score=9440.000000 s hg38.chr20_KI270870v1_alt 52260 2 + 183433 TA s panTro5.chr20 66377269 2 + 66533130 TA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058006 2 + 62195757 TA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443371 2 - 578057 TA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970011 2 - 110113093 TA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697648 2 - 92844088 TA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364978 2 + 96509753 TA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834790 2 - 16982598 TA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637874 2 - 3785965 TA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259591 2 - 90373283 TA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16756 2 - 179258 TA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510663 2 - 5823884 TA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164000 2 + 159171411 TA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229367 2 + 16356641 TA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096670 2 + 1231380 TA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22790105 1 + 22939663 A- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 195706 1 - 397369 -G i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805328 62 + 57149010 I e aotNan1.NW_018500483v1 2625978 20 + 11732439 I a score=148387.000000 s hg38.chr20_KI270870v1_alt 52262 15 + 183433 TGAGCTAACAGG-CCC s panTro5.chr20 66377271 15 + 66533130 TGAGCTAACAGG-CCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058008 15 + 62195757 TGAGCTAACAGG-CCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443373 15 - 578057 TGAGCTAACAGG-CCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970013 16 - 110113093 TGAGCTAACAGGCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697650 15 - 92844088 TGAGCTAATAGG-CCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364980 15 + 96509753 TGAGCTAATAGG-CCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834792 15 - 16982598 TGAGCTAATAGG-CCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637876 15 - 3785965 TGAGCTAATAGG-CCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259593 15 - 90373283 TGAGCTAACAGG-CCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16758 15 - 179258 TGAGCTAATAGG-CCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510665 15 - 5823884 TGAGCTAACAGG-CCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164002 15 + 159171411 TGAGCTAACAGG-CCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229369 15 + 16356641 TGAGCTAACAGG-TGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096672 15 + 1231380 TGAGCGAACAGG-CCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2625998 15 + 11732439 TGAGCTAACAGG-CCC i aotNan1.NW_018500483v1 I 20 C 0 s otoGar3.GL873542 22790106 14 + 22939663 TGAGAC-ATAGG-CCA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 195707 14 - 397369 GGGACGAACAGC-TC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805328 62 + 57149010 I a score=261829.000000 s hg38.chr20_KI270870v1_alt 52277 29 + 183433 CCAGGTG------GGTGGGGACCAGAGTCTTAGGG s panTro5.chr20 66377286 29 + 66533130 CCAGGTG------GGTGGGGACCAGAGTCTTAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058023 29 + 62195757 CCAGGTG------GGTGGGGACCAGAGTCTTAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443388 29 - 578057 CCAGGTG------GGTGGGGACCAGAGTCTTAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970029 24 - 110113093 CCAGGT-----------GGGACCAGAGTCTTGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697665 29 - 92844088 CCAAGTG------GGTGGGGACAAGAGTCTTAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96364995 29 + 96509753 CCAAGTG------GGTGGGGACAAGAGTCTTAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834807 29 - 16982598 CCAAGTG------GGTGGGGACAAGAGTCTTAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637891 29 - 3785965 CCAAGTG------GGTGGGGACAAGAGTTTTAGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259608 29 - 90373283 CCAAGTG------GGTGGGGACAAGAGTCTTAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16773 29 - 179258 CCAAGTG------GGTGGGGACAAGAGTTTTAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510680 29 - 5823884 CCAAGTG------GGTGGGGACCAGAGTCTTAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164017 26 + 159171411 CTGGG--------AGTGGGGACCAGAGTCTTAGG- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229384 26 + 16356641 CCGGG--------GGTGGGGACCAGAGTCTTAGG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096687 26 + 1231380 CTGGG--------GGTGGGGACCAGAGTCTTAGG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626013 26 + 11732439 CCGGG--------GGTGGGGACCAGAGTCTTCGG- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56805390 29 + 57149010 CCAGGTG------GATGGGGACCAGAGTCTTAGGG i micMur3.chr18 I 62 I 627 s otoGar3.GL873542 22790120 27 + 22939663 TTAGCTG------G--TGGGACCCAAGTTGTAGGA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 195721 33 - 397369 CTGGGTGGGGTGCGGCAGGGA--GGGGTCTTAGGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181749519 721 + 182113224 I a score=1023243.000000 s hg38.chr20_KI270870v1_alt 52306 111 + 183433 TGTGTGCTCTGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCGTTAGCGGACATGTGTGTGAGTGAGAAT----------GCTCCTGTGAGTGCATGCATGTTTAGGTGAGTGGGCAT s panTro5.chr20 66377315 111 + 66533130 TGTGTGCTCTGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCGTTAGCGGACATGTGTGTGAGTGAGAAT----------GCTCATGTGAGTGCATGCATGTTTAGGTGAGTGGGCAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058052 111 + 62195757 TGTGTGCTCTGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCATTAGCGGACATGTGTGTGAGTGAGAAT----------GCTCATGTGAGTGCATGCATGTTTAGGTGAGTGGGCAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443417 111 - 578057 TGTGTGCTCTGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGTGTTAGCGGACATGTGTGTTAGTGAGAAT----------GCTCATGTGAGTGCATGCATGTTTAGGTGAGTGGGCAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970053 111 - 110113093 TGTGTGCTCTGCGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCGTTAGCGGACATGTGTGTTAGTGAGAAT----------GCGCATGTGAGTGCATGCATGTTTAGGTGAGCGTGCAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697694 102 - 92844088 ---------TGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCATTAGTGGACATGTGTATTAGTGAGAAT----------GCGCACGTGAGTGCATGCATGTTTAGGTGAGTGTGCAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365024 102 + 96509753 ---------TGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCATTAGTGGACATGTGTATTAGTGAGAat----------gcgcacgtgagtgcatgcatgtttaggtgagtgtgcat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834836 111 - 16982598 TGTGTGCTCTGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCATTAGTGGACATGTGTATTAGTGAGAAT----------GCGCACGTGAGTGCATGCATGTTTAGGTGAGTGTGCAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3637920 111 - 3785965 TGTGTGCTCTGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCATTAGCGGACGTGTGTATTAGTGAGAAT----------GCGCACGTGAGTGCATGCATGTTTAGGTGAGTGTGCAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259637 111 - 90373283 TGTGTGCTCTGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCATTAGCGGACATGTGTATTAGTGAGAAT----------GCGCACGTGAGTGCATGCATGTTTAGGTGAGTGTGCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16802 111 - 179258 TGTGTGCTCTGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCATTAGCGGACATGTGTATTAGTGAGAAT----------GCGCACGTGAGTGCATGCATGTTTAGGTGAGTGTGCAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510709 111 - 5823884 TGTGTGCTCTGTGT-----GCTCTGCAGCACCCACTTTGCAGACATCAGCATTAGCGGACATGTGTGTTAGTGAGAAT----------GCGCACGTGAGTGCATGCATGTTTAGGTGAGTGTGCAT i colAng1.NW_012114444v1 C 0 I 3 s calJac3.chr5 58164043 102 + 159171411 ------CTCTGTAT-----GCTCTGCAACACCCAGTTTGGAGACATCAGCATCAGTGGGCATGTGTG--AGTGAC-at----------gtgcatgtgagtacatgcatgtttaggtgagtgtacat i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229410 102 + 16356641 ------CTCTGTGT-----GCTCTGCAACACCCAGTTTGGGGACATCAGCATCAGtaggcatatgtg--agtgag-at----------gtgcatgtgagtgcatgcatgtttaggtgagtgtacat i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096713 112 + 1231380 ------CTCTGTGT-----GCTTTGCAACACCCAGTTTGGGGACATCAGCATCAGTGGGCATGTGTG--AGTGAG-ACGTGGATGTGAGTGCATGCGAGTGCATGCATGTTTAGGTGAGTGTGCAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626039 101 + 11732439 ------CTCTGTGT-----GCTCTGCAACACCCAGTCTGGGGACATCAGCCTCAGTGGGCATGTGTG--AGTGAG-AT----------GTGCATGTGAGTGCATGCATG-GTAGGTGAGTGTACAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22790147 90 + 22939663 TGTGTGTTCTGTGT-----GCTTAGCAACACACACTTTTGAGACATGTCCATTAGGGGGCATGTAAGTTAGTGTGAGT----------GCACATGTATGTGAATG--------------------- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 195754 88 - 397369 CTCATACTCGGTGCTTTCAGTTTTGGAGC---TAATTTTGAG-CCTCAGCATGCATGGAtgtgtatatgtgt----at----------atacacgtgtgtgcgtgt-------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I a score=1375304.000000 s hg38.chr20_KI270870v1_alt 52417 195 + 183433 GTACATCTACGTGTGAATG-GTGTCTGCATGTACACACATGCACAAAAGT---ATGTATGTG--TAAAC--GTGTGCATATGTGAATGACATGTATATGCTCATGCAGATACGCTA-Atgtgtatgtacatgc--gtgcatgtgtgt-atgtgtaagtggtatatgcatgtgtgtacatgtaggtttttgtgaatatacaagtgtat- s panTro5.chr20 66377426 195 + 66533130 GTACATCTACGTGTGAATG-GTGTCTGCATGTACACACATGCACAAAAGT---ATGTATGTG--TAAAC--GTGTGCATATGTGAATGACATGTATATGCTCATGCAGATACGCTA-Atgtgtatgtacatgt--gtgcatgtgtgt-atgtgtaagtggtatatgcatgtgtgtacatgtaggtttttgtgaatatacaagtgtat- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058163 195 + 62195757 GTACATCTACGTGTGAATG-GTGTCTGCATGTACACACATGCACAAAAGT---ATGTATGTG--TAAAC--GTGTGCATATGTGAATGACATGTATATGCTCATGCAGATACGCTA-Atgtgtatgtacatgt--gtgcatgtgtgt-atgtgtaagtggtatatgcatgtgtgtacatgtaggtttttgtgaatatacaagtgtat- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443528 195 - 578057 GTACATCTACGTGTGAATG-GTGTCTGCATGTACACACATGCACAAAAgt---atgtatgtg--taaac--gtgtgcatatgtgaatgacatgtatatgctcatgcagatacgcta-atgtatatgtacatgt--gtgcatgtgtgt-atgtgtaagtggtatatgcatgtgtgtacatgtaggtttttgtgcatatacaagtgtat- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970164 188 - 110113093 GTACCTCTACGTGTGAAT--GTGTCTGCATGTACACACATGCACAAAA-------GTATGTG--TAAAC--GTGTGCATATGTGAGTGAC--GTATATGCTCATGCAGGTACGCTA-atgtatatgtacatgt--gtgcgtgtgtgt-atgtgtaagtggtatatgcatgtgtgtacatgtaggtttttgtgcatatgcaagtgtat- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697796 193 - 92844088 GTACATCTACGTGTGAATG-GTGTCTGTATGTACACACATGCACACAGGT---ACGTATGTG--TAAAC--GTGTGCATATGTGAGTGAC--GTGTATGCTCATGCAGGTATGCTA-ATGTATATGTAAAtgt--gtgcacgtgtgt-atgtgtaagtggtatgtgcatgtgtgtacatgtaggtttttgtgcatatgcaagtgtat- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365126 174 + 96509753 gtacatctacgtgtgaatg-gtgtctgtatgtacacacatgcacacaggt---acgtatgtg--taaac--gtgtgcatatgtgagtgac--gtgtatgctcatgcaggtatgcta-atgtatatgtaaatgt--gtgcacgtgtgt-atgtgtaagtcgtatgtgcatgtgtgtacatgtaggtttt-------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16834947 193 - 16982598 GTACATCTACGTGTGAATG-GTGTCTGTATGTACACAAATGCACACAGGT---ACGTATGTG--TAAAC--GTGTGCATATGTGAGTGAC--GTGTATGCTCATGCAGGTATGCTA-Atgtgtatgtaaatat--gtgcacgtgtgt-atgtgtaagtggtatgtgcatgtgtgtacatgtaggtttttgtgcatatgcaagtgtat- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638031 193 - 3785965 GTACATCTACGTGGGAATG-GTGTCTGTATGTACACACATGCACAGAGGT---ACGTATGTG--TAAAC--GTGTGCATATGTGAGTGAC--GTGTATGCTCATGCAGGTATGCTA-ATGTATATGTAAAtgt--gtgcatgtgtgt-atgtgtaagtggtatgtgcatgtgtgtacatgtaggtttttgtgcatatgcaagtgtat- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259748 191 - 90373283 GTACATCTATGTGTGAATG-GTGTC--TATGTACACACATGCACAGAGGT---ATGTATGTG--TAAAC--GTGTGCATATGTGAGTGAC--GTGTATGCTCATGCAGGTATGCTA-ATGTATATGTAAAtgt--gtgcacgtgtgt-atgtataagtggtatgtgcatgtgtgtacatgtaggtttttgtgtatatgcaagtgtat- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 16913 193 - 179258 GTACATCTACGTGTGAATG-GTGTCTGTATGTACACACATGCACAGAGGT---ACGTATGTG--TAAAC--GTGTGCATATGTGAGTGAC--GTGTATGCTCATGCAGGTATGCTA-ATGTATATGTAAAtgt--gtgcacgtgtgt-atgtgtaagtggtatgtgcatgtgtgtacatgtaggtttttgtgcatatgcaagtgtat- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58164145 112 + 159171411 gtacatctatgtgtgaatg-ac----gtgtgtatacatgtgca------------------------------------------------------------------gaaactt-atgtatgtgtaaacgt--gcacatgtgagcgacatgta-----tatgctcatgcatgcacac---------------tgtgtaaatgtg-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229512 195 + 16356641 gtacatctatgtgtgaatg-gcatatgtgtgtacacatgtgcaccaaggt---ctgtatgta--taaac--gtgtgcacaggtgagtgacatgtatatgCTCATGCGTGCACACTA-ATGtatgtgtaaatgt--gtgcacatgtgt-atgtgtaggtggtatatgcatgcatgtacatgtaggtttttgtgcatatgcaagtgtat- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1096825 187 + 1231380 GTACATCTATGTGTGAATG-GCATATGTGTGTACACATGTGCACAAAGGT---ATGTAT------------GTGTGCACATGTGAGTGACATGTATTTGCTCATACATGCACACTA-Atgtatgtgtaaatgt--gtgcacgtgtgt-atgtgtaagtggtgtatgcatatgtgtacatgtaggtttttgtgcatatgcaagtgtat- i cebCap1.NW_016107870v1 C 0 I 47 s aotNan1.NW_018500483v1 2626140 193 + 11732439 GTACA--TGTGTGTGAATG-GCATAGGTGTGTACACATGTGCACAAAGGT---ATGTATGTG--TAAACATGTGTGCACATGTGAGTGACATGTAAATGCTCATGCATGCACACTA-GTGTATGTGTAAATGT--GTGCACGTGTGT-ATGTGTA--AGGCGTATGCATGCGTGTACCGGTAGGGTTTTGTGCATATGCAAGTGTGT- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22790237 192 + 22939663 GTATATGCACACATGAAGGTGCTTATGTGTGTACATGTGTGCACACAAGTGGCACGTATATTCCCAAAC--ATGTGCACTCATGAATG---------TGTGCATGCATACACAATATACCTATCtgtaaatgtgcgtgcatgtgtga-gtgtgtgagtggtgtgtgcatgtgcccaagcatg---ttttgagcacatgtaaatatgt- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 195842 162 - 397369 gtaca---gcatgt------gcttatttgagcacttacgtgtatgcatgt---acataggtg--cctac--atg-gtatatatgtgctgc-----------------gccacgcat-gtgtatgtgctcctgc--ttgcttgtgtgc-aggtgtgtgtg-catgtgcttg--tgtacatgtatgtatgagcaca-----gcgtgcatt i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I a score=130672.000000 s hg38.chr20_KI270870v1_alt 52612 35 + 183433 atgtgcacataagcagtgtgt-atgtgtgcatgtgt s panTro5.chr20 66377621 35 + 66533130 atgcgcacataagcagtgtgt-atgtgtgcatgtgt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058358 35 + 62195757 atgcgcacataagcagtgtgt-atgtgtgcatgtgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443723 35 - 578057 atgtgcacataagcagtgtgt-atgtgtgcatgtgt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970352 35 - 110113093 atgtgcacacaagcagtgtgt-atgtgtggatgtgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92697989 34 - 92844088 atgtgcacataagcggtgtgt-atgtgtgcatgtg- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365300 10 + 96509753 -------------------------tgtgcatatg- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835140 30 - 16982598 atgtgcacataagcg----gt-atgtgtgcatgtg- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638224 34 - 3785965 atgtgcacataagcggtgtgt-atgtgtgcatgtg- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259939 34 - 90373283 atgtgcacataagcggtgtgt-atgtgtgcatgtg- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17106 34 - 179258 atgtgcacataagcggtgtgt-atgtgtgcatgtg- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58164257 13 + 159171411 ---tgcacatgtCTGG-------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229707 25 + 16356641 --ctgcacataaatggtgtgtgatgtg--------- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2626333 35 + 11732439 -ATTGCACATAAATGgtgtgtaatgtgtgcatgtgt i aotNan1.NW_018500483v1 C 0 I 190 s otoGar3.GL873542 22790429 34 + 22939663 atgctcacatgaatggagtgt-gtggatgtgagtg- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 196004 34 - 397369 gtgagcttgtgggt-gtgtgg-atgtgtgcacacgt i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e cebCap1.NW_016107870v1 1097012 47 + 1231380 I a score=60820.000000 s hg38.chr20_KI270870v1_alt 52647 24 + 183433 ttgcacat-gtgaggggtgtgcata s panTro5.chr20 66377656 24 + 66533130 gtgcacat-gtgaggggtgtgggta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058393 24 + 62195757 gtgcacat-gtgaggggtgtgggta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443758 23 - 578057 gtgcacat-gtgaggggtgtgcgt- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970387 24 - 110113093 gtgcacat-gtgaggggtgtgtgta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698023 17 - 92844088 -------t-gtgagtggtatgtatg i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835170 17 - 16982598 -------t-gtgagtggtatgtatg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638258 17 - 3785965 -------t-gtgagtggtgtgtatg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259973 17 - 90373283 -------t-gtgagtggtgtgtatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17140 17 - 179258 -------t-gtgagtggtgtgtatg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58164270 9 + 159171411 ---------GTAAGTGGt------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229732 17 + 16356641 -------t-gtgagtggtatatatg i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22790463 19 + 22939663 gagtacat-gt-----gtattcatg i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 196038 25 - 397369 gtgtgcttgGTGAGTGGTTTGCACA i dasNov3.JH569290 C 0 I 709 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e cebCap1.NW_016107870v1 1097012 47 + 1231380 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I e macFas5.chr10 96365310 0 + 96509753 C a score=10225.000000 s hg38.chr20_KI270870v1_alt 52671 3 + 183433 tat s panTro5.chr20 66377680 3 + 66533130 tat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058417 3 + 62195757 tat i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109970411 3 - 110113093 tat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698040 3 - 92844088 tac i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835187 3 - 16982598 tac i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638275 3 - 3785965 tac i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259990 3 - 90373283 tac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17157 3 - 179258 tac i manLeu1.NW_012101652v1 C 0 C 0 s saiBol1.JH378156 16229749 3 + 16356641 tat i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22790482 3 + 22939663 tgt i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e gorGor5.CYUI01015848v1 443781 0 - 578057 C e cebCap1.NW_016107870v1 1097012 47 + 1231380 I e calJac3.chr5 58164279 0 + 159171411 C e aotNan1.NW_018500483v1 2626368 190 + 11732439 I e macFas5.chr10 96365310 0 + 96509753 C a score=185453.000000 s hg38.chr20_KI270870v1_alt 52674 82 + 183433 atatgcatgtatatgcatgtgggca----gtgtgttcacatgtgtatatg----tgca----------------------------------------------tgtgtgcatgtgtgtgcaca-----tgtgaggggtgc s panTro5.chr20 66377683 74 + 66533130 atatgcatgtatatgcatgtgggca----gtgtgttcacatgtgtata----------------------------------------------------------tgtgcatgtgtgtgcaca-----tgtgaggggtgt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058420 74 + 62195757 atatgcatgtatatgcatgtgggca----gtgtgttcacatgtgtata----------------------------------------------------------tgtgcatgtgtgtgcaca-----tgtgaggggtgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443781 78 - 578057 ------atgtatatgcatgtgggca----gtgtgttcacatgtgtatatg----tgcatg--------------------------------------------tgtgtgcatgtgtgtgcaca-----tgtgaggggtgc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970414 123 - 110113093 atatgcatgtatatgcatgtgggca----gtgtgttcacacgtgtatatg----tgcatgt-----gtgttcacacgtgtatatgtgcacataagcagtgtgtatgtgtggatgtgtgtgcaca-----tgtgaggggtgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698043 61 - 92844088 tcacgtgtgtatatgcatgtgggca----gtatgttcacacgtgtatatg----------------------------------------------------------ggcatgtgtgtgcat------------------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365310 69 + 96509753 -caagtgtatatgtgcacataagcggtgtgtatgtgtgcatgtgtgtgag----t-----------------------------------------------------ggtatgtatgtactca-----cgt--------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835190 61 - 16982598 tcatgtgtgtatatgcatgtgggca----gtatgttcacacgtgtatatg----------------------------------------------------------ggcatgtgtgtgcat------------------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638278 80 - 3785965 tcacgtgtgtatatgcatgtgggca----gtgtgttcacacgtgtatatg----ca------------------------------------------------tgtgtgtatgtgtgtgcaca-----tgtgaggggtga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90259993 78 - 90373283 tcacgtgtgtatatgcatgtgggca------gtgttcacacgtttctatg----ca------------------------------------------------tgtgtgtatgtgtgtgcaca-----tgtgaggggtgc i chlSab2.chr2 C 0 I 172 s manLeu1.NW_012101652v1 17160 81 - 179258 tcacgtgtgtatatgcatgtgggca----gtgtgttcacacgtgtatatgggcatg------------------------------------------------tgtgtgcatgtgtgtgcaca-----tgtgagggt--- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58164279 93 + 159171411 gtatgcatgcatgtacatgtaggtt-tttgtgcatatgcaagtgtatatg----tgcacataaatggtgtataa------------------------------tgtgtgcatgtgtgtgaat-------------ggtac i calJac3.chr5 C 0 C 0 s otoGar3.GL873542 22790485 89 + 22939663 atatgcctctctgtgtatgtttgta----tgCATTTCTCATGTGAATACA----TGCATG--------------------------------------------TGCTTGTATGTGTGAGGGTAGAAGGTGTGAGTGGTGC i otoGar3.GL873542 C 0 I 2 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e saiBol1.JH378156 16229752 0 + 16356641 C e cebCap1.NW_016107870v1 1097012 47 + 1231380 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I a score=-26142.000000 s hg38.chr20_KI270870v1_alt 52756 93 + 183433 gtg--tatatat----gcatgtatatgcatgtgggcagtgtgttcacatgtgta----------tgtgtgcat-------gcgtgtgCACATGCGAG-GGGTGCATGTATATATGT-----G----- s panTro5.chr20 66377757 13 + 66533130 g--------------------------------------------------------------------------------------------------------tgtatatatgt-----g----- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058494 13 + 62195757 g--------------------------------------------------------------------------------------------------------tgtatatatgt-----g----- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443859 13 - 578057 g--------------------------------------------------------------------------------------------------------tgtatatatgt-----g----- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970537 95 - 110113093 gtgtatatatat----gcatgtatatgcatgtgggcagggtgttcacatgtgta----------tatgtgcat-------gtgtgtgcacatgtgag-gggtgcatctatatatgt-----g----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698104 30 - 92844088 --------------------------------------------------------------------------------gtgtgtgcacatgtgag-gg-----tgcgtgtatat----------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365379 85 + 96509753 ------------------gtgtatatgcatgtgggcagtgtgttcacacgtgtatatgggcatgtgtgtgcat-------gtgtgtgcacatgtgag-gg-----tgcgtgtatat----------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835251 30 - 16982598 --------------------------------------------------------------------------------gtgtgtgcacatgtgag-gg-----tgcgtgtatat----------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638358 100 - 3785965 ----gtgtgtat----gcgtgtatatgcatgtgggcagtgtgttcacacgtgtatatgggcatgtgtgtgcat-------gtgtgtgcacatgtgag-gg-----tgcatgtatatatgtg------ i cerAty1.NW_012001373v1 C 0 I 169 s chlSab2.chr2 90260243 97 - 90373283 --gtgtatatgt----gtgtgtatatgcaagtgggtggtgtgttcacatgtgtatatgtgcatgtgtgtgcat-------gcatgtgcacatgtgag-gg-----tgtgtatatat----------- i chlSab2.chr2 I 172 C 0 s manLeu1.NW_012101652v1 17241 95 - 179258 --gtgtatatat----gtgtgtatatgcatgtgggtggtgtgttcaca--catagacgtgcctgtgtgtgcat-------gtgtgtgcacatgttag-gg-----tgcatgtatat----------- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58164372 76 + 159171411 ----atatgtattcacatgtgtatatgcatgtgggtggtgtgctcacacatgta----------tatgtgcat-------gtgtatgca----------------tgtgtGCA-------------- i calJac3.chr5 C 0 C 0 s otoGar3.GL873542 22790576 95 + 22939663 --------------------GCgtatgtatgtaggca-tgtatttatgtacatgtgcccacaaatgtttgcatatgtgcagtatgtatatatgtgagtgg-----tgcatgtatat------atggt i otoGar3.GL873542 I 2 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e saiBol1.JH378156 16229752 0 + 16356641 C e cebCap1.NW_016107870v1 1097012 47 + 1231380 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I a score=2100.000000 s hg38.chr20_KI270870v1_alt 52849 1 + 183433 C s panTro5.chr20 66377770 1 + 66533130 c i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058507 1 + 62195757 c i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443872 1 - 578057 c i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970632 1 - 110113093 c i nomLeu3.chr13 C 0 C 0 s calJac3.chr5 58164448 1 + 159171411 C i calJac3.chr5 C 0 C 0 s otoGar3.GL873542 22790671 1 + 22939663 c i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e cerAty1.NW_012001373v1 3638458 169 - 3785965 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e chlSab2.chr2 90260340 0 - 90373283 C e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e manLeu1.NW_012101652v1 17336 0 - 179258 C e saiBol1.JH378156 16229752 0 + 16356641 C e macNem1.NW_012014244v1 16835281 0 - 16982598 C e cebCap1.NW_016107870v1 1097012 47 + 1231380 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I e rheMac8.chr10 92698134 0 - 92844088 C e macFas5.chr10 96365464 0 + 96509753 C a score=10164.000000 s hg38.chr20_KI270870v1_alt 52850 9 + 183433 ATGTACTCA s panTro5.chr20 66377771 9 + 66533130 atgtactca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058508 9 + 62195757 atgtactca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443873 9 - 578057 atgtactca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970633 9 - 110113093 atgtactca i nomLeu3.chr13 C 0 C 0 s calJac3.chr5 58164449 9 + 159171411 AGGTGATTG i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1097059 9 + 1231380 ATGTATTCA i cebCap1.NW_016107870v1 I 47 C 0 s otoGar3.GL873542 22790672 5 + 22939663 atgcg---- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e cerAty1.NW_012001373v1 3638458 169 - 3785965 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e chlSab2.chr2 90260340 0 - 90373283 C e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e manLeu1.NW_012101652v1 17336 0 - 179258 C e saiBol1.JH378156 16229752 0 + 16356641 C e macNem1.NW_012014244v1 16835281 0 - 16982598 C e aotNan1.NW_018500483v1 2626368 190 + 11732439 I e rheMac8.chr10 92698134 0 - 92844088 C e macFas5.chr10 96365464 0 + 96509753 C a score=1757.000000 s hg38.chr20_KI270870v1_alt 52859 1 + 183433 C s panTro5.chr20 66377780 1 + 66533130 c i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058517 1 + 62195757 c i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443882 1 - 578057 c i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970642 1 - 110113093 t i nomLeu3.chr13 C 0 C 0 s calJac3.chr5 58164458 1 + 159171411 c i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229752 1 + 16356641 c i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097068 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22790677 1 + 22939663 t i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e cerAty1.NW_012001373v1 3638458 169 - 3785965 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e chlSab2.chr2 90260340 0 - 90373283 C e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e manLeu1.NW_012101652v1 17336 0 - 179258 C e macNem1.NW_012014244v1 16835281 0 - 16982598 C e aotNan1.NW_018500483v1 2626368 190 + 11732439 I e rheMac8.chr10 92698134 0 - 92844088 C e macFas5.chr10 96365464 0 + 96509753 C a score=208466.000000 s hg38.chr20_KI270870v1_alt 52860 32 + 183433 GTGTGTATATGCATGTGGGCAGTGTGTTCACA s panTro5.chr20 66377781 32 + 66533130 gtgtgtatatgcatgtgggcagtgtgttcaca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058518 32 + 62195757 gtgtgtatatgcatgtgggcagtgtgttcaca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443883 31 - 578057 gtgtgtatatgcatgtgggcaatgtgttcac- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970643 32 - 110113093 gtgtgtatatgcatgtgggcagtgtgttcaca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698134 32 - 92844088 gtgtgtatatgcatgtgggtggtgtgttcaca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365464 32 + 96509753 gtgtgtatatgcatgtgggtggtgtgttcaca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835281 32 - 16982598 gtgtgcatatgcatgtgggtggtgtgttcaca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638627 32 - 3785965 gtgtgtatatgcatgtgggtggtgtgttcaca i cerAty1.NW_012001373v1 I 169 C 0 s chlSab2.chr2 90260340 32 - 90373283 gtgtgtatatgcaagtgggtggtgtgttcaca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17336 32 - 179258 gtgtgtatgtgcatgtgggtggtgtgttcaca i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58164459 27 + 159171411 atatatacagacatat-----atacatttata i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229753 29 + 16356641 acgtgtatatgcgtgt---tggtgtgctcaca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097069 32 + 1231380 ATGTGCATATGCATGTGGGTGGTGTGCTCACA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22790678 23 + 22939663 gtgtgtatata---------agtgtgttcatg i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e mm10.chr2 181749519 721 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I a score=97230.000000 s hg38.chr20_KI270870v1_alt 52892 12 + 183433 TGTGCATATGTG s panTro5.chr20 66377813 12 + 66533130 tgtgcatatgtg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058550 12 + 62195757 tgtgcatatgtg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443914 11 - 578057 -gtgcatatgtg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970675 12 - 110113093 cgtgtatatgtg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698166 12 - 92844088 tgtgtatatgtg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365496 12 + 96509753 tgtgtatatgtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835313 12 - 16982598 tgtgtatatgtg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638659 12 - 3785965 tgtgtatatgtg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260372 12 - 90373283 tgcatatatgtg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17368 12 - 179258 tgtgtatatgtg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58164486 12 + 159171411 catacacacatg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229782 12 + 16356641 catgcacatgtg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097101 12 + 1231380 CATGTATATGTG i cebCap1.NW_016107870v1 C 0 I 27 s otoGar3.GL873542 22790701 12 + 22939663 tgtgtacatgtg i otoGar3.GL873542 C 0 I 17 s mm10.chr2 181750240 12 + 182113224 TGTGTGAATGTG i mm10.chr2 I 721 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I a score=86223.000000 s hg38.chr20_KI270870v1_alt 52904 16 + 183433 CATGTGTGTGCA--------CATG s panTro5.chr20 66377825 16 + 66533130 catgtgtgtgCA--------CACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058562 16 + 62195757 catgtgtgtgCA--------CATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443925 16 - 578057 catgtgtgtgca--------catg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970687 16 - 110113093 catgtgtgtgca--------catg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698178 24 - 92844088 catgtgtgtgcatgcatgtgcacg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365508 24 + 96509753 catgtgtgtgcatgcatgtgcacg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835325 24 - 16982598 catgtgtgtgcatgcatgtgcacg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638671 24 - 3785965 catgtgtgtgcatgcatgtgcacg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260384 24 - 90373283 catgtgtgtgcatgcatgtgcacg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17380 24 - 179258 catgtgtgtgcatgcatgtgcacg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58164498 14 + 159171411 tatacatatacaca---------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229794 24 + 16356641 catgcatatgcatatgtgtgcaca i saiBol1.JH378156 C 0 I 2 s otoGar3.GL873542 22790730 16 + 22939663 CACTtgtgtgcc--------tatg i otoGar3.GL873542 I 17 I 2 s mm10.chr2 181750252 16 + 182113224 CATGTGTGTGCATGCA-------- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e cebCap1.NW_016107870v1 1097113 27 + 1231380 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I a score=140400.000000 s hg38.chr20_KI270870v1_alt 52920 27 + 183433 TGAGGGGTACATGTATATATGTGCACA s panTro5.chr20 66377841 27 + 66533130 TGAGGGGTACATGTACATATGTGCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058578 27 + 62195757 TGAGGGGTACATGTACATATGTGCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443941 27 - 578057 tgaggggtacatgtacatatgtgcaca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970703 26 - 110113093 tga-gggtgcacgtatatatgtgcaca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698202 26 - 92844088 cga-gggtgcgtgtatatatgtgcaca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365532 26 + 96509753 cga-gggtgtgtgtatatatgtgcaca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835349 26 - 16982598 cga-gggtgcgtgtatatatgtgcaca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638695 26 - 3785965 tga-gggtgcgtgtatatatgtgcacg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260408 22 - 90373283 tga-gagtgtg----tatatatgcacg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17404 26 - 179258 tga-gggtgtgtgtatatatgtgcacg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58164512 20 + 159171411 -------tacatgtatatatGTGACCa i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229820 27 + 16356641 tgagcggtacgtgtatatatgtgccca i saiBol1.JH378156 I 2 C 0 s cebCap1.NW_016107870v1 1097140 27 + 1231380 TGAGTGGTACATGTATATATGTGCCCA i cebCap1.NW_016107870v1 I 27 C 0 s otoGar3.GL873542 22790748 25 + 22939663 tga-aagtg-gtgagtatatgggaatg i otoGar3.GL873542 I 2 I 1 s mm10.chr2 181750268 26 + 182113224 TGA-GTTTAGGTTAATGTACATGAGCA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e colAng1.NW_012114444v1 5510820 3 - 5823884 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I a score=308646.000000 s hg38.chr20_KI270870v1_alt 52947 44 + 183433 TGCATGTGTGCATACAGCTATGCACATTGTG---TGTACATGCACAT s panTro5.chr20 66377868 44 + 66533130 TGCATGTGTGCACACACCTATGCACATTGTG---TGTACATGCAAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058605 27 + 62195757 TGCATGTGTGCACACACCTATGCAC--------------------AT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 443968 40 - 578057 tgcatgtgtgcatacagctatgcacat-------tgtacatgcacat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970729 43 - 110113093 tgcatgtgtgcatatagctatgttcat-gtg---tgtacatgcacag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698228 43 - 92844088 tgcatgtgtgcatatagctgtgtttat-gtg---tgtacatgcacat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365558 43 + 96509753 tgcatgtgtgcatatagctgtgttcat-gtg---tgtacatgcacat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835375 43 - 16982598 tgcatgtgtgcatatagctgtgttcat-gtg---tgtacatgcacat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638721 43 - 3785965 tgcatgtgtgcatatagctgtgttcat-gtg---tgtacatgcacat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260430 43 - 90373283 tgcgtgtgtgtatatagctgtgttcat-gtg---tgtacatgcacat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17430 43 - 179258 tgcatgtgtgcatatagctgtgttcat-gtg---tgtacatgcacat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510823 43 - 5823884 TGCATGTGTGCATATAGCTGTGTTCAT-GTG---tgtacatgcacat i colAng1.NW_012114444v1 I 3 C 0 s calJac3.chr5 58164532 43 + 159171411 tgtatatgtgcatatagctgtgttcat-ctg---tgtacatgcacat i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229847 43 + 16356641 tgcatgtgtgcatatagctgtgttcat-ccg---tgtacatgcacat i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097167 43 + 1231380 TGCATGTGTACATATAGCTGTGTTCAT-CTG---TGTACATGCACAT i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22790774 42 + 22939663 tgtgtatgtacaagtaa-tgtaagcaa-gtgatatgtttatgta--- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181750294 32 + 182113224 TGCATGTGTATTAGCA------------GTG---TATGTATGCAAAT i mm10.chr2 C 0 I 1625 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I a score=120268.000000 s hg38.chr20_KI270870v1_alt 52991 20 + 183433 TGTGTGTACATGTGTATATT s panTro5.chr20 66377912 20 + 66533130 TGTGTGTACATGTGTATATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058632 20 + 62195757 TGTGTGTACATGTGTATATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444008 20 - 578057 tgtgtgtacgtgtgtatatt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970772 20 - 110113093 tgtgtgtacatgtgtatatg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698271 20 - 92844088 tgtgtgtacatgtgtatatg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365601 20 + 96509753 tgtgtgtacatgtgtatatg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835418 20 - 16982598 tgtgtgtacatgtgtatatg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638764 20 - 3785965 tgtgtgtacatgtgtatatg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260473 20 - 90373283 tgtgcgtacatgtgtatatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17473 20 - 179258 tgtgtgtacatgtgtatatg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510866 20 - 5823884 tgtgtgtacatgtgtatatg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164575 14 + 159171411 t----gcacgtg--cttctg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229890 8 + 16356641 t----gcacatg-------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097210 16 + 1231380 T----GCACATGTGCATCTG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22790816 20 + 22939663 tgtgtatacatgtgtgcttt i otoGar3.GL873542 C 0 I 277 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I a score=612081.000000 s hg38.chr20_KI270870v1_alt 53011 73 + 183433 TCAGGATGTGCATATGTGTAAAA----------------GTTGTGTACATGTAAGTAATGC--ATGTGTGTGTGCATGTGTTCAAGTGATT---- s panTro5.chr20 66377932 73 + 66533130 TCAGCATGTGCATATGTGTAAAA----------------GTTGTGTACATGTAAGTAATGC--ATGTGTGTGTGCATGTGTTCAAGTGATT---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058652 73 + 62195757 TCAGCATGTGCATATGTGTAAAA----------------GTTGTGTACATGTAAGTAATGC--ATGTGTGTGTGCATGTGTTCAAGTGATT---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444028 73 - 578057 tcagcatgtgcatatgtgtaaaa----------------gttgtgtacatgtaagtaatgc--atgtgtgtgtgcatgtGTTCAAGTGATT---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970792 87 - 110113093 tcagcatgtgcgtatgtgcaaaagtgaatg--tgtgtgcgttgtgtacatgtaagtaatgc--atgtgtgtgtgcatgtgttcaagtgatt---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698291 89 - 92844088 tcagcatgtgcatatgtgtaaaagtgaatgtatgtgtgtgttgtgtacatgtaagtaatgc--atgtgtgtatgcatgtgttcaagtgata---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365621 89 + 96509753 tcagcatgtgcatatgtgtaaaagtgaatgtatgtgtgtgttgtgtacatgtaagtaatgc--atgtgtgtatgcatgtgttcaagtgata---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835438 87 - 16982598 tcagcatgtgcatatgtgtaaaagtgaatg--tgtgtgtgttgtgtacatgtaagtaatgc--atgtgtgtatgcatgtgttcaagtgata---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638784 89 - 3785965 tcagcatgtgcatatgtgtaaaagtgaatgtatgtgtgtgttgtgtacatgtaagtaatgc--atgtgtgtatgcatgtgttcaagtgata---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260493 89 - 90373283 tcagcatgtgcatatgtgtaaaagtgaatgtatgtgtgtgttgtgtacatgtaagtaatgc--atgtgtgtatgcatgtgtttaagtgata---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17493 89 - 179258 tcagcatgtgcatatgtgtaaaagtgaatgtatgtgtgtgttgtgtacatgtaagtaatgc--atgtgtgtatgcatgtgttcaagtgata---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510886 89 - 5823884 tcagcatgtgcatatgtgtaaaagtgaatgtatgtgtgtgttgtgtacatgtaagtaatgt--atgtgtgtatgcatgtgttcaagtgata---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164589 89 + 159171411 tcagc--atgtgcatgtgtaaaagtgaa----tgtgagtgttgtgtacatgtaagtaatgcatatgtgtgcatgaatgtgttcaagtgataggtt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229898 83 + 16356641 --------tgcatgtgtgtaaaggtgaa----tgtgagtattgtgtacatgtaagtaatgcatatgtgtgcatgaatgtgtTCAAGTGATAGGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097226 91 + 1231380 CCAGCATATGCATGTGTGTAAAAGTGAA----TGTGAGTGTTGTGTACATGTAAGTAATGCATATGTGTGCATGAATGTGTTCAAGTGATAGGTC i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e aotNan1.NW_018500483v1 2626368 190 + 11732439 I e otoGar3.GL873542 22790836 277 + 22939663 I a score=165962.000000 s hg38.chr20_KI270870v1_alt 53084 19 + 183433 TG--TGTGTGCATATGCTACA s panTro5.chr20 66378005 19 + 66533130 TG--TGTGTGCATATGCTACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058725 19 + 62195757 TG--TGTGTGCATATGCTACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444101 19 - 578057 TG--TGTGTGCATATGCTACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970879 19 - 110113093 tg--tgtgtgcatatgctaca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698380 21 - 92844088 tgtttgtgtgCATAGGCTACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365710 21 + 96509753 tgtttgtgtgcataggctaca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835525 21 - 16982598 tgtttgtgtgCATAGGCTACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638873 21 - 3785965 tgtttgtgtgCATAGGCTACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260582 21 - 90373283 tgtttgtgtgCATAGGCTACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17582 21 - 179258 tgtttgtgtgCATAGGCTACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510975 21 - 5823884 tgtttgtatGCATAGGCTACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164678 17 + 159171411 ----tgtgtgcatatgctgca i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16229981 19 + 16356641 TG--TGTGTGCATATGCTGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097317 19 + 1231380 TG--TGCATGCATATGCTGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626558 19 + 11732439 tg--tgtgtgCATATGCTGCA i aotNan1.NW_018500483v1 I 190 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e otoGar3.GL873542 22790836 277 + 22939663 I a score=473044.000000 s hg38.chr20_KI270870v1_alt 53103 51 + 183433 CATGTGTGCGTTCATGAACATATGTGTGTGAGTGGTGAGATTAAGTGTATG s panTro5.chr20 66378024 51 + 66533130 CATGTGTGCTTTCATGAACATATGTGTGTGAGTGGTGAGTGTAAGTGCTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058744 51 + 62195757 CATGTGTGCTTTCATGAACATATGTGTGTGAGTGGTGAGTGTAAGTGCTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444120 51 - 578057 CATGTGTGCTTTCATGAACATATGTGTGTGAGTGGTGAGTGTAAGTGTATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970898 49 - 110113093 c--gtgtgctttcatgaacatatgtgtgtgagtggtgagtgtaagtgtatg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698401 51 - 92844088 CATGTGTGCTTTCATGAGCATATGTGTGTGGGTGGTGAGTGTAAGTGCATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365731 51 + 96509753 catgtgtgctttcatgagcatatgtgtgtgggtggtgagtgtaagtgcatg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835546 51 - 16982598 CATGTGTGCTTTCATGAGCATATGTGTGTGGGTGGTGAGTGTAAGTGCATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638894 51 - 3785965 CATGTGTGCTTTCATGAGCATATGTGTGTGGGTGGTGAGTGTAAGTGCATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260603 51 - 90373283 CATGTGTGCTTTCATGAGCATATGTGTGTGGGTGGTGAGTGTAAGTGCATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17603 51 - 179258 CATGTGTGCTTTCATGAGCATATGTGTGTGGGTGGTGAGTGTAAGTGCATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5510996 49 - 5823884 C--GTGTGCTTTCATGAGCATATGTGTGTGGGTGGTGAGTGTAAGTGCATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164695 49 + 159171411 aatgtgtgcttttatgaac--acgtgtgtgagtggtgattgtgagtgtata i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230000 45 + 16356641 AATGTGTGCTTTCATGAAC--ACGTGTGTGAGAGG----TGTGAGTGTATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097336 49 + 1231380 AATGTGTGCTTTCATGAGC--ACgtgtgtgagtggtgagtgtgagcgtgtg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626577 49 + 11732439 AATGTGTGCTTTCATGAAC--ACGTGTGTGAGTGGGGATTGCGAGTGTATG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22791113 49 + 22939663 catgtgtgctttcttaagcatgtgtatgtgagtgttaagtgtgagtgtg-- i otoGar3.GL873542 I 277 C 0 e proCoq1.NW_012150197v1 1811769 714 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56805419 627 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I a score=414066.000000 s hg38.chr20_KI270870v1_alt 53154 32 + 183433 TGCACAGAGGCCT-CAGACTGAGTCTGAT----GGGG s panTro5.chr20 66378075 32 + 66533130 TGCACAGAGGCCT-CAGACTGAGTCTGAT----GGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058795 32 + 62195757 TGCACAGAGGCCT-CAGACTGAGTCTGAT----GGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444171 32 - 578057 TGCACAGAGGCCT-CAGACTGAGTCTAAT----GGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970947 32 - 110113093 tgCACAGAGGTCT-CAGACTGAGTCTGAT----GGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698452 33 - 92844088 TGCACAGAGGCCT-CAGACTGAGTCTGAT---GGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365782 33 + 96509753 tgcaCAGAGACCT-CAGACTGAGTCTGAT---GGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835597 34 - 16982598 TGCACAGAGGCCT-CAGACTGAGTCTGAT--GGGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638945 33 - 3785965 TGCACAGAGGCCT-CAGACTGAGTCTGAT---GGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260654 33 - 90373283 TACACAGAGGCCT-CAGACTGAGTCTGAT---GGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17654 33 - 179258 TGCACAGAGGCCT-CAGACTGAGTCTGAT---GGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511045 36 - 5823884 TGCACAGAGGCCT-CAGACTGAGTCTGATGGGGGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164744 32 + 159171411 tgCACAGAGGCCT-CAGACTGAGTCTGCT----GGGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230045 31 + 16356641 TGCACAGAGGCCT-CAGACT-AGTCTGCT----GGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097385 32 + 1231380 tgCACAGAGGCCT-CAGACTGAGTCGGCT----GGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626626 32 + 11732439 TGCACAGAGGCCT-CAGACTGAGTCTGCT----GGGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56806046 32 + 57149010 TGCACAGAGGCCT-CAGACTGAGTCTGAT----GGGG i micMur3.chr18 I 627 I 190 s proCoq1.NW_012150197v1 1812483 32 - 2029793 TGCACAGAGGCCT-CAGGCTGAGTCTGAT----GGGG i proCoq1.NW_012150197v1 I 714 C 0 s otoGar3.GL873542 22791162 33 + 22939663 tgcgCAGTTGTTTCCAGACTGAGTCTGAT----GGGG i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e dasNov3.JH569290 196063 709 - 397369 I a score=205881.000000 s hg38.chr20_KI270870v1_alt 53186 16 + 183433 GTCCCTGCTAGCTCTG s panTro5.chr20 66378107 16 + 66533130 GTCCCTACTAGCTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058827 16 + 62195757 GTCCCTGCTAGCTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444203 16 - 578057 GTCCCTGCTAGCTCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970979 16 - 110113093 GTCCCTGCTAGCTCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698485 16 - 92844088 GTCCTTGCTAGCTCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365815 16 + 96509753 GTCCCTGCTAGCTCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835631 16 - 16982598 GTCCCTGCTAGCTCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638978 16 - 3785965 GTCCCTGCTAGCTCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260687 16 - 90373283 GTCCCTGCTAGCTCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17687 16 - 179258 GTCCCTGCTAGCTCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511081 16 - 5823884 GTCCCTGCTAGCTCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164776 16 + 159171411 GTTCCTCCTGGCTCTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230076 16 + 16356641 GTTCCTGCTGGCTCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097417 16 + 1231380 ATTCCTGCTGGCTCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626658 16 + 11732439 GTTCCTGCTGGCTCTG i aotNan1.NW_018500483v1 C 0 I 11 s proCoq1.NW_012150197v1 1812515 16 - 2029793 GTTCCTGCTAGCTCTG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22791195 16 + 22939663 ATTCTTGCTAGCTCTG i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806078 190 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I a score=58704.000000 s hg38.chr20_KI270870v1_alt 53202 5 + 183433 GAGAG s panTro5.chr20 66378123 5 + 66533130 GAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058843 5 + 62195757 GAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444219 5 - 578057 GAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109970995 5 - 110113093 GAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698501 5 - 92844088 GAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365831 5 + 96509753 GAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835647 5 - 16982598 GAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638994 5 - 3785965 GAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260703 5 - 90373283 GAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17703 5 - 179258 GAGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511097 5 - 5823884 GAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164792 5 + 159171411 GAGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230092 5 + 16356641 GAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097433 5 + 1231380 GAGAG i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1812531 5 - 2029793 GAGAG i proCoq1.NW_012150197v1 C 0 I 257 s otoGar3.GL873542 22791211 5 + 22939663 GATAG i otoGar3.GL873542 C 0 I 24 e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806078 190 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e aotNan1.NW_018500483v1 2626674 11 + 11732439 I a score=33287.000000 s hg38.chr20_KI270870v1_alt 53207 4 + 183433 AATG s panTro5.chr20 66378128 4 + 66533130 AATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058848 4 + 62195757 AATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444224 4 - 578057 AATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971000 4 - 110113093 AATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698506 4 - 92844088 AATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365836 4 + 96509753 AATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835652 4 - 16982598 AATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3638999 4 - 3785965 AATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260708 4 - 90373283 AATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17708 4 - 179258 AATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511102 2 - 5823884 AA-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164797 4 + 159171411 AATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230097 4 + 16356641 AATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097438 4 + 1231380 AATG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22791240 4 + 22939663 AACG i otoGar3.GL873542 I 24 C 0 e proCoq1.NW_012150197v1 1812536 257 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806078 190 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I e aotNan1.NW_018500483v1 2626674 11 + 11732439 I a score=1259095.000000 s hg38.chr20_KI270870v1_alt 53211 138 + 183433 TGGTAGCAGGGC-----TGAGGCCCTTGTCTTCAGCTGAATGAGTCTGCCTGGCGTGCGCTCAGTGCTCTCCCGCTCTCCTGCTTCTCTTCTGAGGTCAGTCACAGACCTGGACATCCGGCTTGTGGGGGGTATTGAGTTGCA s panTro5.chr20 66378132 138 + 66533130 TGGTAGCAGGGC-----TGAGGCCCTTGTCTTCAGCTGAATGAGTCTGCCTGGCGTGCACTCAGTGCTCTCCCGCTCTCCTGCTTCTCTTCTGAGGTCAGTCACAGACCTGGACATCCGGCTTGTGGGGGGTATTGAGTTGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058852 138 + 62195757 TGGTAGCAGGGC-----TGAGGCCCTTGTCTTCAGCTGAATGAGTCTGCCTGGCATGCACTCAGTGCTCTCCCGCTCTCCTGCTTCTCTTCTGAGGTCAGTCACAGACCTGGACATCCGGCTTGTGGGGGGTATTGAGTTGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444228 137 - 578057 TGGTAGCAGGGC-----TGAGGCCCTTGTCTTCAGCTGAATGAGTCTGCCTGGCGTGCGCTCAGTGCTCTCCTGCTCTCCTGCTTCTCTTCTGAGGTCAGTCACAGACCTGGACATCCGGCTTGT-GGGGGTATTGAGTTGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971004 138 - 110113093 TGGTGGCAGGGC-----TGAGGCCTCTGTCTTCAGCTGAATGAGTCTGCCTGGCATGCGCTCAGCGCTCTCCTGATCTCCTGCTTCTCTTCTGAGTTCAGTCACAGACCTGGACATCTGGCTTGTGGGGGGTATTGAGTTGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698510 137 - 92844088 TGCTCACAGGAC-----TGAAGCCC-TGTCTTCAGCTGAGTGGGTCTGTCTGGCGTGCGCTCAGCACTCTCCTGCTCTCCTCCTGCTCTTCTGAGGTCAGCCACAGACCTGGACATCTGGCTTGTGGGGGGTATTGAGTTTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365840 137 + 96509753 TGCTCACAGGAC-----TGAAGCCC-TGTCTTCAGCTGAGTGGGTCTGTCTGGTGTGCGCTCAGCACTCTCCTGCTCTCCTCCTGCTCTTCTGAGGTCAGCCACAGACCTGGACATCTGGCTTGTGGGGGGTATTGAGTTTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835656 137 - 16982598 TGCTCACAGGAC-----TGAAGCCC-TGTCTTCAGCTGAGTGGGTCTGTCTGGCGTGCGCTCAGCACTCTCCTGCTCTCCTCCTGCTCTTCTGAGGTCAGCCACAGACCTGGACATCTGGCTTGTGGGGGGTATTGAGTTTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639003 137 - 3785965 TGGTCACAGGAC-----TGAAGCCC-TGTCTTCAGCTGAGTGGGTCTGTCTGGCGTGCGCTCAGCACTCTCCTGCTCTCCTCCTGCTCTTCTGAGGTCAGCCACAGACCTGGACATCTGACTTGTGGGGGGTATTGAGTTTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260712 137 - 90373283 TGGTCACAGGAC-----TGAAGCCC-TGTCTTCAGCTGAGTGGGTCTGTCTGGCGTGCGCTCAGCAAACTCCTGCTCTCCTCCTGCTCTTCTGAGGTCAGCCACAGACCTGGACGTCTGGCTTGGGGGGGGTATTGAGTTTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17712 137 - 179258 TGGTCACAGGAC-----TGAAGCCC-TGTCTTCAGCTGAGTGGGTCTGTCTGGCGTGCGCTCAGCACTCTCCTGCTCTCCTCCTGCTCTTCTGAGGTCAGCCACAGACCTGGACATCTGGCTTGTGGGGGGTATTGAGTTTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511104 103 - 5823884 ----------------------------------------TGGTTCTGTCTGGCGTGTGTTCAGCACTCTTCTGCTCTCCTGCTGTTCTTCTGAGGTCAGTCACAGACCTGGACATCTGGCTTGTGGGGGGTATTGAGTTTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164801 142 + 159171411 TGGTAGCAGGGCTGAGGTGAGGCCCTTGTCTTCAGCTGAACAAGTCTACCTGGGGTGTAGTTGGTGCTTTCCTGCTCTGCTGCTTCTCTTCTGAGGTCAGTCACAGACCTGGACATCTGGCTTGT-GGGGGGATTGAGTTGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230101 142 + 16356641 TGGTAGCAGGGCCGAGGTGAGGCCCTTGTCTTCAGCTGAATGAGTCTACCTGGGGTGCACTCGGTGCTCTCCTGCTCTGCTGCTTCTCTTCTGAGGTCAGTCAGAGACCTGGACATCTGGCTTGT-GGAGGTATTGAGTTGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097442 142 + 1231380 TGGTAGCAGGGCTGAGGTGAGGCCCTTGTCTTCAGCTGAATGAGTCTACCTGGGGTGCACTCGGTGCTCACCTGCTCTGCTGCCTCTCTTCTGAGGTCAGTCACAGACCTGGACATCTGGCTTGT-GGGGGTATTGAGTTGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626685 141 + 11732439 TGGTAGCAGGGCTGAGGTGAGGCCCTTGTATTCAGCTGAGCGAGTCTACCT-GGGTGCACTCGGTACGCTCCTGCTCTGCTGCTGCTCTTCTGAGGTCAGTCACGGACCTGGACATCTGGTTTGT-GGGGGTATTGAGTTGCA i aotNan1.NW_018500483v1 I 11 C 0 s otoGar3.GL873542 22791244 132 + 22939663 TGGTGGCAGGGT-----TGAGGTCCTGCTCTTCACCTGAATGAGCCTGTGTGCTGTGTGCTCCATGATCTCCTGCTCTCC-----CCTCCCTGGAGCCAGCCACAGACCTAGATATCCAGTGTGG-GAGGATACTGGGTTGCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1812536 257 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806078 190 + 57149010 I e dasNov3.JH569290 196063 709 - 397369 I a score=510610.000000 s hg38.chr20_KI270870v1_alt 53349 57 + 183433 G-TGGCTGTGTGTGCTTTTGT---------ATGTGAACAC-ATGTGCT------------------------------------------------CATGTGTTGC--ATGTGTGTGG s panTro5.chr20 66378270 57 + 66533130 G-TGGCTGTGTGTGCTTTTGT---------ATGTGAACAC-ATGTGCT------------------------------------------------CATGTGTTGC--ATGTGTGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62058990 57 + 62195757 G-TGGCTGTGTGTGCTTTTGT---------ATGTGAACAC-ATGTGCT------------------------------------------------CATGTGTTGC--ATGTGTGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444365 57 - 578057 G-TGGCTGCATGTGCTTTTGT---------ATGTGAACAC-ATGTGCT------------------------------------------------CATATGTTGC--ATGTGTGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971142 57 - 110113093 G-TGGCTGCATGTGCTTTTGT---------ATGTGAACAC-ATGTGCT------------------------------------------------CATGTGTTGC--ATGTGTGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698647 55 - 92844088 G-TGGCTGCATGTGCTTTTGT---------ATGTGA--AC-ATGTGCT------------------------------------------------CATGTGTTGC--ATATGTGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96365977 55 + 96509753 G-TGGCTGCATGTGCTTTCGT---------ATGTGA--AC-ATGTGCT------------------------------------------------CATGTGTTGC--ATATGTGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835793 55 - 16982598 G-TGGCTGCATGTGCTTTCGT---------ATGTGA--AC-ATGTGCT------------------------------------------------CATGTGTTGC--ATATGTGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639140 55 - 3785965 G-TGGCTGCATGTGCTTTCGT---------ATGTGA--AC-ATGTGCT------------------------------------------------CATGTGTTGC--ATATGTGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260849 55 - 90373283 G-TGGCTGCATGTGCTTTCGT---------ATGTGA--AC-ATGTGCT------------------------------------------------CATGTGTTGC--ATATGTGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17849 55 - 179258 G-TGGCTGCATGTGCTTTCGT---------ATGTGA--AC-ATGTGCT------------------------------------------------CATGTGTTGC--ATATGTGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511207 55 - 5823884 G-TGGCTGCATGTGCTTTCGT---------ATGTGA--AC-GTGTGAT------------------------------------------------CGTGTGTTGC--ATATGTGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58164943 49 + 159171411 G-TGGCTGCATGTGCTTTTTT---------GTGTGAATAC-ATGTGCA------------------------------------------------CATGTGTTGC--AT-------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230243 57 + 16356641 G-TGGCTGCATGTGCTTTTGT---------GTGTGAATAC-ATTTGCA------------------------------------------------CATGTGTTGC--GCCTGTGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097584 57 + 1231380 G-TGGCTGCATGTGCTTTTGT---------GTGTGAATAC-ATGTGCA------------------------------------------------CATGTGTTGC--ACCTGTGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626826 57 + 11732439 G-TGACTGTGTGTGCTTGTGT---------GTGTGAATAC-ATGTGCA------------------------------------------------CATGTGTTGC--ATCTGTGTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22791376 115 + 22939663 GTTGGCTTTACGTATTTGTGTACTACATGCATGTGTAAAT-ATGTGCTTTTCACAAGCTTGGCATTCAGCATTGCTGGATTCCTAGCATGGAGGAACACGTGTTGC--ATATGTGTTG i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 196772 59 - 397369 G-TGGCTGTG-GGGCTGATGC---------TTGTGGGCACGGGGTGGA------------------------------------------------CAGCTGGGGCTGATGTCCGTGG i dasNov3.JH569290 I 709 C 0 e proCoq1.NW_012150197v1 1812536 257 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806078 190 + 57149010 I a score=377881.000000 s hg38.chr20_KI270870v1_alt 53406 33 + 183433 TGTGCACTGTGTCTGGATGTGATCATAGGCAGC s panTro5.chr20 66378327 33 + 66533130 TGTGCACTGTGTCTGGATGTGATCATAGGCAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059047 33 + 62195757 TGTGCACTGTGTCTGGATGTGATCATAGGCAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444422 33 - 578057 TGTGCACTGTGTCTGGATGTGATCATAGGCAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971199 33 - 110113093 TGTGCACTGTGTCTGGATGTGATCATAGGCAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698702 32 - 92844088 TGTGCACTGTGTCCAGATGTGATCACAGGCA-C i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96366032 33 + 96509753 TGTGCACTGTGTCCAGATGTGATCATAGGCAGC i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16835848 33 - 16982598 TGTGCACTGTGTCCAGATGTGATCATAGGCAGC i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3639195 33 - 3785965 TGTGCACTGTGTCCGGATGTGATCATAGGCAGC i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90260904 33 - 90373283 TGTGCACTGTGTCCGGATGTGATCATAGGCAGC i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 17904 33 - 179258 TGTGCACTGTGTCCGGATGTGATCATAGGCAGC i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5511262 33 - 5823884 TGCGCACTGTGTCCGGATGTGATCATAGGCAGC i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chr5 58164992 27 + 159171411 ------CTATGTCTGAATGTGATCATAGGCAGC i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16230300 33 + 16356641 TATGCACTATGTCTGGATGTGATCATAGGCAGC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1097641 33 + 1231380 TATGCACTGTGTCTGGATGTGATCATAGGCAGC i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2626883 33 + 11732439 TATGCACTGTGTCTGGATGTGATCATAGGCAGC i aotNan1.NW_018500483v1 C 0 I 1 s micMur3.chr18 56806268 33 + 57149010 TGTGCACTGTGTCTGGCTGTGAGCATAGGCAGC i micMur3.chr18 I 190 I 29 s otoGar3.GL873542 22791491 16 + 22939663 TGTGTACTGTGTCTGT----------------- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 196831 30 - 397369 TGGGTACGGGGT--GGCTGTGGG-GCAGGCGGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1812536 257 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I a score=310803.000000 s hg38.chr20_KI270870v1_alt 53439 33 + 183433 ATTTTGGGGTATTTTTGGGTGTCAGGGTACTCA s panTro5.chr20 66378360 33 + 66533130 ATTTTGGAGTATTTTTGGGTGTCGGGGTACTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059080 33 + 62195757 ATTTTGGTGTATTTTTGGGTGTCGGGGTACTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444455 33 - 578057 ATTTTGGGGTATTTTTGGGTGTCGGGGTACTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971232 33 - 110113093 ATTTTGGGGTATTTTTGGGTGTCGGGGTACTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698735 33 - 92844088 ATTTTGGGGTATTTTTGGGTGTCAGGGCACTCA i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96366066 33 + 96509753 ATTTTGGGGTATTTTTGGGTGTCAGGGCACTCA i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16835882 33 - 16982598 ATTTTGGGGTATTTTTGGGTGTCAGGGCACTCA i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3639229 33 - 3785965 ATTTTGGGGTATTTTTGGGTGTCAGGGCACTCA i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90260938 33 - 90373283 ATTTTGGGGTATTTTTGGGTGTCAGGGCACTCA i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 17938 33 - 179258 ATTTTGGGGTATTTTTGGGTGTCAGGGCACTCA i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5511296 33 - 5823884 ATTTTGGGGTATTTTTGGGTGTCAGGGCACTCA i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chr5 58165020 9 + 159171411 ATTTTGGGG------------------------ i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16230334 33 + 16356641 ATTTTGGGGTATTTTTGGGTGTCAGGGTACTCA i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1097675 33 + 1231380 ATTTTGGGGTATTTTTGGGTGTCAGAAAACTCA i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2626917 33 + 11732439 ATTTTGGGGTATTTTTCGGGGTCAGGGTACTCA i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22791507 23 + 22939663 -CTTTGGGGTGTTTT---------GAGTCCCCA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 196861 32 - 397369 -TTGCTGGGGGCGCTTTGTGGCCAGAGGACCCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1812536 257 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806301 29 + 57149010 I a score=42313.000000 s hg38.chr20_KI270870v1_alt 53472 3 + 183433 CTG s panTro5.chr20 66378393 3 + 66533130 CTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059113 3 + 62195757 CTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444488 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971265 3 - 110113093 CTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698768 3 - 92844088 CTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366099 3 + 96509753 CTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835915 3 - 16982598 CTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639262 3 - 3785965 CTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260971 3 - 90373283 CTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17971 3 - 179258 CTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511329 3 - 5823884 CTG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16230367 3 + 16356641 CTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097708 3 + 1231380 CTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626950 3 + 11732439 CTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1812793 3 - 2029793 CTG i proCoq1.NW_012150197v1 I 257 C 0 s otoGar3.GL873542 22791530 2 + 22939663 -TG i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 196893 3 - 397369 CTG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806301 29 + 57149010 I e calJac3.chr5 58165029 0 + 159171411 C a score=1332191.000000 s hg38.chr20_KI270870v1_alt 53475 99 + 183433 GGGGCATTGAAGAT-GCAGTGGCAAAGCAGGTGTCCAGGAGTCTGAGCTCAGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG s panTro5.chr20 66378396 99 + 66533130 GGGGCATTGAAGGT-GCAGTGGCAAAGCAGGTGTCCAGGAGTCTGAGCTCAGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059116 99 + 62195757 GGGGCATTGAAGGT-GCAGTGGCAAAGCAGGTGTCCAGGAGTCTGAGCTCAGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444491 100 - 578057 GGGGCATTGAAGGTGGCAGTGGCAAAGCAGGTGTCCAGGAGTCTGAGCTCAGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971268 99 - 110113093 GGGGCATTGAAGGT-GCAGTGGCAAAGCAGGTGTCCAGGAGTCTGAGCTCAGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698771 99 - 92844088 GGGGCATTAAAGGT-GCAGTGACGAAGCAGGGGTACAGGAGTCTGAGCTCGGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366102 99 + 96509753 GGGGCATTAAAGGT-GCAGTGATGAAGCAGGTGTACAGGAGTCTGAGCTCGGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16835918 99 - 16982598 GGGGCATTAAAGGT-GCAGTGACGAAGCAGGTGTACAGGAGTCTGAGCTCGGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639265 99 - 3785965 GGGGCATTAAAGGT-GCAGTGACGAAGCAGGTGTACAGGAGTCTGAGCTCGAACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90260974 99 - 90373283 GAGGCATTAAAGGT-GCAGTGACGAAGCAGGTGTACAGGAGTCTGAGCTCGGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 17974 99 - 179258 GGGGCATTAAAGGT-GCAGTGACGAAGCAGGTGTACAGGAGTCTGAGCTCGGACTTGACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTACATGGAAGTGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511332 99 - 5823884 GGGGCATTGAAGGT-GCAGTGACGAAGCAGGTGTACGGGAGTCTGAGCTCAGACTTGACTTTCTGCCTGGGTCAGCCTACA-TTTTCTACATGGAAGTGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165029 88 + 159171411 ---GCATTGAAAGT-GCAGTGACAAAG--------CAGGAATCTGAGCTCAGACTCTGTTTTCTGCCTGGGTCAGCCCAGA-TTTTCTATATGGAAGTGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230370 99 + 16356641 GGTGCATTGAAAGT-GCAGTGACAAAGCAGGTGTCCAGGAATCTGAGCTCAGACTCCACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTATATGGAAGTGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097711 99 + 1231380 GGGGCATTGAAAGG-GCAGTGACAAAGCAGGTGTCCAGGAATCTGAGCTGAAACTCCACTTTCTGCCTGGGTCAGCCTAGA-TTTTCTATATGGAAGTGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2626953 98 + 11732439 GGGGCATTGAAAGT-GCAGTGACAAAGCAGGTGT-CAGGAATCTGAGCTCAGACTCCACTTTTTGCCTGGGTCAGCCTAGA-TTTTCTATATGGAAGTGAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56806330 100 + 57149010 GGGGCACCGAAGGT-GCAGGGACAAAGCAGGTGCCCAGGAGTCTGAGTTCGGACTTGACTTTTTGCCTGGGTTGGCCCAGATTTTTCCACATGGAAGTGAG i micMur3.chr18 I 29 I 1 s proCoq1.NW_012150197v1 1812796 100 - 2029793 GAGGCACTGAAGGT-GCAGTGACAAAGCAGGTGCCCAGGAGTCTGAGCTCGGAGCTGACTGTTTGCCTGGGTCAGCCCGGATTTTTCTACCTGGAAGTGAG i proCoq1.NW_012150197v1 C 0 I 27 s otoGar3.GL873542 22791532 95 + 22939663 AGGGCATTGAAGGT-ACAATGACAAAGCAGGTGCCCAAGATTCTGAACTCAGACTCAACTTTTTGCCTGGGT-----CATATTTTTTTACATAAAAGTGAG i otoGar3.GL873542 C 0 I 1 s dasNov3.JH569290 196896 66 - 397369 TGGGCCTTGAA----GCA-------------CACACAGCACTCTGG-----------------TGCCTTGGTCAGCCTGAA-GTTTCCACGCGGAAGTGAG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I a score=419242.000000 s hg38.chr20_KI270870v1_alt 53574 33 + 183433 GTGAAAGGGAGAGGAATATTTGGGAGCCCTTCT s panTro5.chr20 66378495 33 + 66533130 GTGAAAGGGAGAGGAATATTTGGGGGCCCTTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059215 33 + 62195757 GTGAAAGGGAGAGGAATATTTGGGGGCCCTTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444591 33 - 578057 GTGAAAGGGAGAGGAATATTTGGGGCCCCTTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971367 33 - 110113093 GTGAGAGGGAGAGGAATGTCTGGGGACCCTTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698870 33 - 92844088 GTGAGAGGAAGAGGAATATTTGGGGGCCCTTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366201 33 + 96509753 GTGAGAGGAAGAGGAATATTTGGGGGCCCTTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836017 33 - 16982598 GTGAGAGGAAGAGGAATATTTGGGGGCCCTTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639364 33 - 3785965 GTGAGAGGAAGAGGAATATTTGGGGGCCCTTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261073 33 - 90373283 GTGAGAGGAAGAGGAATATTTGGGGGCCCTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18073 33 - 179258 GTGAGAGGAAGAGGAATATTTGGGGGCCCTTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511431 33 - 5823884 GTGAGAGGAAGAGGAATATTTGGGGGCCCTTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165117 33 + 159171411 GTGAGAGGGAGAGGAATATTTGAGGGCCCTTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230469 33 + 16356641 GTGAGAGGGAGAGGAATATTTGGGGGCCCTTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097810 33 + 1231380 GTGAGAGGGAGAGGAATATTTGGGGGCCCTTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627051 33 + 11732439 GCGAGAGGGAGAGGAATATTTGGGGGCCCTTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56806431 33 + 57149010 AGGTGGGAAAGAGGAATCTTTGGGGGCCTGTCT i micMur3.chr18 I 1 C 0 s otoGar3.GL873542 22791628 33 + 22939663 AAGTGGGAAAGAGGAATATTTAGGGGCCCTTCT i otoGar3.GL873542 I 1 C 0 s dasNov3.JH569290 196962 22 - 397369 -----------GGGCGTCTTGGGGCGCTCTCCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1812896 27 - 2029793 I e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I a score=443700.000000 s hg38.chr20_KI270870v1_alt 53607 35 + 183433 CTGTCCCTTAGGTCCCTAGGAGCCCAAGGATGGTG s panTro5.chr20 66378528 35 + 66533130 CTGTCCCTTAGGTCCCTAGGAGCCCAGGGATGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059248 35 + 62195757 CTGTCCCTTAGGTCCCTAGGAGCCCAGGGATGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444624 34 - 578057 CTGT-CCTTAGGTCCCTAGGAGCCCAGGGATGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971400 35 - 110113093 CTGTCCCTTAGGTCCCTAGGAGCCCAGGGATGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698903 35 - 92844088 CTGTCCCTTAGGTCCCTAGGAGCCCAGGTATGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366234 35 + 96509753 CTGTCCCTTAGGTCCCTAGGAGCCCAGGTATGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836050 35 - 16982598 CTGTCCCTTAGGTCCCTAGGAGCCCAGGTATGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639397 35 - 3785965 CTGTCCCTTAGGTCCCTAGGAGCCCAGGTATGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261106 35 - 90373283 CTGTCCCTTAAGTCCCTAGGAGCCCAGGTTTGGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18106 35 - 179258 CTGTCCCTTAGGTCCCTAGGAGCCCAGGTATGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511464 35 - 5823884 CTGTCCCTTAGGTCCCTGGGAGCCCAGGTATGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165150 35 + 159171411 CTGTCCCTTAGGTCCCTAGGAGCCCAGGGATAGTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230502 31 + 16356641 CTGTTCCTTAGGTCCCTAGGAGCTCAGG----GTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097843 35 + 1231380 CTGTCCCTTAGGTCCCCAGGAGCCCAGGGATACTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627084 34 + 11732439 CTGTCCCTTAGG-CCCCAGGAGCCCAGGGATAGTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56806464 35 + 57149010 CTATCCCTTAAGTCTCCAGGAGCCCAAGGACAGTA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1812923 35 - 2029793 CTGTCTCTTAGGTCCCCAGGAGCCCAGGGACAGTA i proCoq1.NW_012150197v1 I 27 C 0 s otoGar3.GL873542 22791661 34 + 22939663 CTGTGTCTTAGATCCCTAGAAGCCTAGGAATGGT- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 196984 20 - 397369 ---------------CGGGGAGCCCAGGGGCAGAG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47562391 6 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I a score=325073.000000 s hg38.chr20_KI270870v1_alt 53642 28 + 183433 AGAGGGCCCAGCCCTTGGTTTTTGATCT s panTro5.chr20 66378563 28 + 66533130 AGAGGGCCCAGCCCTTGGTTTTTGATCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059283 28 + 62195757 AGAGGGCCCAGCCCTTGGTTTTTGATCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444658 27 - 578057 AGAGGGCCCAG-CCTTGGTTTTTGATCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971435 28 - 110113093 AGAGGGCCCAGCCCTTGGTTTTTGATCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698938 18 - 92844088 AGAGGGCCCAGCCCTTGG---------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366269 18 + 96509753 AGAGGGCCCAGCCCTTGG---------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836085 18 - 16982598 AGAGGGCCCAGCCCTTGG---------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639432 28 - 3785965 AGAGGGCCCAGCCCTTGGTTTCTGATCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261141 28 - 90373283 AGAGGGTCCAGCCCTTGGTTTTTGATCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18141 28 - 179258 AGAGGGCCCAGCCCTTGGTTTCTGATAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511499 28 - 5823884 AGAGGGCCCAGCCCTTGGTTTTTGATCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165185 28 + 159171411 AGAGGGCCCAGCCCTTGGATTTTGATCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230533 28 + 16356641 AGAGGGCCCAGCCCTTGGATTTTAATCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097878 28 + 1231380 AGAGGGCCCAGCCCTTGGATTTTAATCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627118 28 + 11732439 AGAGGGCCCAGCCCTTGGATTTTGATCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56806499 28 + 57149010 AGAAGGCCCAGGCTTTGATTTCTGATCT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1812958 28 - 2029793 AGGAGGCCCAGGCTTTGGTTTCTGATCT i proCoq1.NW_012150197v1 C 0 I 865 s otoGar3.GL873542 22791695 28 + 22939663 AGAAGGTCCAGGCTTTGGTTTTTGATCT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562397 28 + 47698779 AGCAGGCCTAGGGCTCTGTTTCCGAACT i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 197004 19 - 397369 --AGAGCCGAGTGTCTGGCCT------- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181750326 1625 + 182113224 I a score=365602.000000 s hg38.chr20_KI270870v1_alt 53670 30 + 183433 ATTTGAGAGGAACCGAGTAATC-------------TTCTGGGG s panTro5.chr20 66378591 30 + 66533130 ATTTGAGAGGAACCGAGTAATC-------------TTCTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059311 30 + 62195757 ATTTGAGAGGAACCGAGTAATC-------------TTCTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444685 30 - 578057 ATTTGAGAGGAACCGAGTAATC-------------TTCTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971463 30 - 110113093 ATTTAAGAGGAACCGAGTAATC-------------TTCTGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698956 28 - 92844088 --TTGGGAGGAACTGAGTAATC-------------TTCTGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366287 28 + 96509753 --TTGGGAGGAACTGAGTAATC-------------TTCTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836103 28 - 16982598 --TTGGGAGGAACTGAGTAATC-------------TTCTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639460 30 - 3785965 ATTTGGGAGGAACTGAGTAATC-------------TTCTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261169 30 - 90373283 ATTTGGGAGGAACTGAGTAATC-------------TTCTGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18169 30 - 179258 ATTTGGGAGGAACTGAGTAATC-------------TTCTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511527 30 - 5823884 ATTTGGGAGGAACCGAGTAATC-------------TTCTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165213 30 + 159171411 ACTTGAGAGGGGCTGAGTGATC-------------TTCTGGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230561 30 + 16356641 ACTTGAGAGGGACTGAGTGATC-------------TTCTGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097906 30 + 1231380 ACTTGAGAGGGACTGAGTGATC-------------TTCTGGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627146 30 + 11732439 ACTTGAGAGGGACTGAGTGATC-------------TTCTGGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56806527 30 + 57149010 CTTTGGGAGTGACTGAGTGATC-------------TTCGGGTC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22791723 30 + 22939663 CTTTGAGAGTGGCTGAGTAATC-------------TCTTGGAT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562425 41 + 47698779 --TTCTGCGTGACTGGTTGGTCTTCCAGGAGGTGTTTCTGGAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 197023 30 - 397369 CTCTGAGAGTGACGGGAAAACC-------------CTCTGGGG i dasNov3.JH569290 C 0 I 143 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I a score=635333.000000 s hg38.chr20_KI270870v1_alt 53700 61 + 183433 TCT----GCTCTTGGCTTCTTCAGTACAGTGAAATTAGCTGAGCAGTTCCTCTGGGCAGAGCCTC s panTro5.chr20 66378621 61 + 66533130 TCT----GCTCTTGGCTTCTTCAGTACAGCGAAATTAGCTGAGCAGTTCCTCTGGGCAGAGCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059341 61 + 62195757 TCT----GCTCTTGGCTTCTTCAGTACAGTGAAATTAGCTGAGCAGTTCCTCTGGGCAGAGCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444715 61 - 578057 TCT----GCTCTTGGCTTCTTCAGTACAGTGAAATTAGCTGAGCAGTTCCTCTGGGCAGAGCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971493 61 - 110113093 TCC----GCTGTTGGCTTCTTCAGTACAGTGAAATTAGCTGAGCACTTCCTCTGGGCAGAGCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92698984 56 - 92844088 TCC----GCTTTTGGCTTCTTCAGTACAGTGAAATT-----AGCGCTTTCTCTGGGCAGAGCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366315 56 + 96509753 TCC----GCTTTTGGCTTCTTCAGTACAGTGAAATT-----AGCGCTTTCTCTGGGCAGAGCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836131 56 - 16982598 TCC----GCTTTTGGCTTCTTCAGTACAGTGAAATT-----AGCGCTTTCTCTGGACAGAGCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639490 56 - 3785965 TCC----GCTTTTGGCTTCTTCAGTACAGTGAAATT-----AGCGCTTTCTCTGGGCAGAGCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261199 56 - 90373283 TCC----ACTTTTGGCTTCTTCAGTACAGTGAAATT-----AGCGCTTTCTCTGGGCAGAGCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18199 56 - 179258 TCC----GCTTTTGGCTTCTTCAGTACAGTGAAATT-----AGCGCTTTCTCTGGGCAGAGCCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511557 56 - 5823884 TCC----GCTTTTGGCTTCTTCAGTACAGTGAAATT-----AGCGCTTTCTCTGGGCAGAGCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165243 61 + 159171411 TCC----TATCTTGGCTTCTTCAGTGCAGAGAAATTAGCTGAGCAAGTCCTCTGGGCAGAACCTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230591 61 + 16356641 TCC----TGTCTTGGCTTCTTCAGTACAGAGAAATTAGCTGAGCAAGTCCTCTGGGCAGAGCCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097936 61 + 1231380 TCC----TATCTCGGCTTCTTCAGTACAGAGAAATTAGCTGAGCAACTCCTCTGGGCAGAGGCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627176 61 + 11732439 TCC----TATCTTGGCTTCTTCAGTACAGAGAAATTAGCTGAGCAAGTCCTCTGGGCAGAGCCCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56806557 59 + 57149010 C------TTTCCGGGCTCCCTCAGTACAGAGCAATTGGCTGAGCACTTCCTGTGGGCAGAGCCTC i micMur3.chr18 C 0 I 1007 s otoGar3.GL873542 22791753 65 + 22939663 TACTCAATCTCCAGGCTCCCTCAGTACACAGAAATTGGCTGGGCATTTCTTACAGGCAGAAACTC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562466 61 + 47698779 TCG----TGTCTGGTCCCCCGCAGTACAGAGAGATTGGCTGAGCACTTTTTGTGGTCAGAATCTT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e dasNov3.JH569290 197053 143 - 397369 I a score=409179.000000 s hg38.chr20_KI270870v1_alt 53761 37 + 183433 TGCTAACATTCCTTTGAA--GCCT-CCCTCCATGCTGGGA s panTro5.chr20 66378682 37 + 66533130 TGCTAACATTCCTTTGAA--GCCT-CCCTCCATGCTGGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059402 37 + 62195757 TGCTAACATTCCTTTGAA--GCCT-CCCTCCATGCTGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444776 37 - 578057 TCCTAACATTCCTTTGAA--GCCT-CCCTCCATGCTGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109971554 37 - 110113093 TCCTAACATTCCTCTGAA--GCCT-CCCTCCATGCTGGGA i nomLeu3.chr13 C 0 I 658 s rheMac8.chr10 92699040 37 - 92844088 TCCTAACATTCCTTTGAA--GCCT-CCCTCCAGGCTGGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366371 37 + 96509753 TCCTAACATTCCTTTGAA--GCCT-CCCTCCAGGCTGGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836187 37 - 16982598 TCCTAACATTCCTTTGAA--GCCT-CCCTCCAGGCTGGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639546 37 - 3785965 TCCTAACATTCCTTTGAA--GCCT-CCCTCCAGGCTGGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261255 37 - 90373283 TCCTAACATTCCTTTGAA--GCCT-CCCTCCAGGCTGGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18255 37 - 179258 TCCTAACATTCCTTTGAA--GCCT-CCCTCCAGGCTGGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511613 37 - 5823884 TCCTAACATTCCTTTGAA--GCCT-CCCTCCAGGCTGGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165304 37 + 159171411 TCCTAACATTTCTTTGAA--GCTT-CCCTCCATGCTGGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230652 37 + 16356641 TCCTAACGTTCCTTTGAA--GCCT-CCCTCCATGTTGGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1097997 37 + 1231380 TCCTAACATTCCTTTGAA--GCCT-CCCTCCATGCTGGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627237 37 + 11732439 TCCTAACATTCCTTTGAA--GCCT-CTCTCCATGCTGGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22791818 24 + 22939663 -------------TTGTA--ATCT-TCCTCTACACTAGGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562527 39 + 47698779 -CCGGAGGTTTCTTCTGACTGCTTCCCCTCCCTGCGGGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I a score=3236710.000000 s hg38.chr20_KI270870v1_alt 53798 342 + 183433 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACATACTTGC----AG-----TGG-AAGAGACACCATGCCTGTCCCAccagccccttcacttttggggtcaagcattattagagccctgccaatggattgtgtgtgtcgtgacagatgtcagctgggaggaaaagacactgggcccctcctgcacaggggccttatttctagagaaagggaagactgaggtgcaacgt-gggcctgtggttagggagactgcattctgaacaccgtgggaagaatgctagaagctctcagcctctgccttcctctgccatgctcgagctggtcagtcatggtccccgaggccctacag s panTro5.chr20 66378719 342 + 66533130 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACACACTTGC----AG-----TGG-AAGAGACACCATGCCTGTCCCAccagccccttcacttttggggtcaagcattattagagccctgctaatggattgtgtgtgtcgtgacagatgtcagctgggaggaaaagacactgggcccctcctgcacaggggccttatttctagagaaagggaagactgaggtgcaacgt-gggcctatggttagggagactgcattctgaacaccgtgggaagaatgctagaagctctcagcctctgccttcctctgccatgctcgagctggtcagtcatggtccccgaggccctacag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059439 342 + 62195757 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACACACTTGC----AG-----TGG-AAGAGACACCATGCCTGTCCCAccagccccttcacttttggggtcaagcattattagagccctgccaatggattgtgtgtgtcgtgacagatgtcagctgggaggaaaagacactgggcccctcctgcacaggggccttatttctagagaaagggaagactgaggtgcaacgt-gggcctatggttagggagactgcattctgaacaccgtgggaagaatgctagaagctctcagcctctgccttcctctgccatgctcgagctggtcagtcatggtccccgaggccctacag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 444813 342 - 578057 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACATACTTGC----AG-----TGG-AAGAGACACCATGCCTGTCCCAccagccccttcacttttggggtcaagcattattagagccctgccaatggattgtgtgtgtcgtgacagatgtcagctgggaggaaaagacactgggcccctcctgcacaggggccttatttctagagaaagggaagactgaggtgcaacgt-gggcctgtggttagggagactgcattctgaacaccgtgggaagaatgctagaagctctcagcctctgccttcctctgccatgctcgagctggtcagtcatggtccctgaggccctacag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109972249 343 - 110113093 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACACACTTGC----AG-----TGGTGAGAGAGACCATGCCTGTCCCAccagccccttcacttttggggttaagcgttattagagccctgccagtggattgtgtgtgttgtgacagatgtcagctgggaggaaaagacactgggcccctcctgcacaggggccttatttctacagaaagggaaggctgaggtgcaacct-gggcctgtggttagggagactgcattctgaacactgtgggacgaatgctagaagctctcagcctctgccttcctctgccatgctcaagctggtcagtcatggtccccgagaccctacag i nomLeu3.chr13 I 658 C 0 s rheMac8.chr10 92699077 341 - 92844088 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACATACTCAC----AG-----TGG-GAGAGAGACCGTGCCTCTCCCAccagcctcttctcttttggggtcaagcgtgattggagccctgccaatggattgtgtgtgtcgtgacaggtgtcagccgggaggaaaagacactgggcccctcctgcacagggaactca-ttctagagaaagggaagactgaggtgcaacgt-gggcctgtgggtatggaaactgtactctgaacaccgtgggatgaatgctagaagctcttagcctctgccttcctctgacatgctcaagctggtcagtcatggtgcccgaggccctacag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366408 341 + 96509753 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACATACTCAC----AG-----TGG-GAGAGAGACCGTGCCTCTCCCAccagcctcttctcttttggggtcaagcgtgattggagccctgccaatggattgtgtgtgtcgtgacaggtgtcagccgggaggaaaagacactgggcccctcctgcacagggaactca-ttctagagaaagggaagactgaggtgcaacgt-gggcctgtgggtatggaaactgtactctgaacaccgtgggatgaatgctagaagctcttagcctctgccttcctctgacatgctcaagctggtcagtcatggtgcccgaggccctacag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836224 341 - 16982598 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACATACTCAC----AG-----TGG-GAGAGAGACCGTGCCTCTCCCAccagcctcttctcttttggggtcaagcgtgattggagccctgccaatggattgtgtgtgtcgtgacaggtgtcagccgggaggaaaagacactgggcccctcctgcacagggaactca-ttctagagaaagggaagactgaggtgcaacgt-gggcctgtgggtatggaaactgtactctgaacaccgtgggatgaatgctagaagctcttagcctctgccttcctctgacatgctcaagctggtcagtcatggtgcccgaggccctacag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639583 341 - 3785965 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACATACTCAC----AG-----TGG-GAGAGAGACCGTGCCTGTCCCAccagccccttctcttttgcggtcaagcgtgattggagccctgccaatggattgtgtgtgtcgtgacaggtgtcagccgggaggaaaagacactgggcccctcctgcacagggaactca-ttctagagaaagggaagactgaggtgcaacgt-gggcctgtgggtatggagactgtactctgaacaccgtgggatgaatgctagaagctctcagcctctgccttcctctgacatgctcaagctggtcagtcatggtgcccgaggccctacag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261292 339 - 90373283 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGATATACTCGC----AG-----TGG-GAGAGAGACCGTGCCTGTCCCAccagccccttctcttttgggatcaagcgtgattggagccctgccaatggat--tgtgtgtcgtgacaggtgtcagccgggaggaaaagacactgggcccctcctgcacagggaactca-ttctagagaaagggaagactgaggtgcaacgt-gggcctgtgggtatggaaactgtactctgaacaccgtgggatgaatgctagaagctctcagcctctgccttcctctgacatgctcaagctggtcagtcatggtgcccgaggccctacag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18292 341 - 179258 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACATACTCAC----AG-----TGG-GAGAGAGACCGTGCCTGTCCCAccagccccttctcttttggggtcaagcgtgattggagccctgccaatggattgtgtgtgtcgtgacaggtgtcagccgggaggaaaagacactgggcccctcctgcacagggaactca-ttctagagaaagggaagactgaggtgcaacgt-gggcctgtgggtatggagactgtactctgaacaccgtgggatgaatgctagaagctctcagcctctgccttcctctgacatgctcaagctagtcagtcatggtgcctgaggccctacag i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511650 341 - 5823884 ATCCAGCAATGTCCAGTGATAAGCTTGGGAGGAGGACATACTCGC----AG-----TGG-GAGAGAGACTGTGCCTGTCCCAccagccctttcacttttggggtcaagtatgattggagccctgccaatggattgtgtgtgtcgtgacagatgtcagccgggaggaaaagccactgggcccctcctgcacaaggaactta-ttccagagaaaggcaagactgaggtgcaacat-gggcctgtgggtatggagactgtactctgaacaccatgggatgaatgctagaagctctcagcctctgcattcctctgacatgctcaagctggtcagtcatggtccccgaggccctacag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165341 328 + 159171411 ATACAGCAATGTCCAGTGATAAGCTT-------GGACATACTTGC----AG-----TGG-GAGAGAGACCATGCCTGTCCCACCAGCCCCTTCACTTCTGGGGTCAGGCATTATTGGAGCCCTGCCAGTGGATGGTGACTGTCTTGACAGATGTCAGCTGGGATGACA----TCTGGTTGCCTCCTGTACAGGGGACTTATTTCTAGAGAAAGGGAAGACTGAGGTGTGACAT-GGGCCTGTGGGTAGGGAGACTGTGTTCTGCCCACTGTGGAACGACTGTTAGAAGCTCTCAGGGCTTGA---CCTCTGCCATGCTCAAGCTGGTCAGTCAAGGTCCCTGAGGCCCTGcag i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16230689 327 + 16356641 ATCCAGCAATGTACAGTGATAAGCTT-------GGACATACTTGC----AG-----TGG-GAGAGAGACCATGCCTGTCCCACCAGCCCCTTCACTTC-GGGGTCAGGCATTACTGGATCTCTGCCAGTGGATGGCGACTGTCGTGACGGACGTCAGCTGGGATGATA----TCTGGGCACCTCCTGTACAGGGGACTTATTTCTAGAGAAAGGGAAGACTGAGGTGCGACGT-GGGCCTGTGGGTAGGGAGACTGCGTTCTGCCCACTGTGGAACGAATGCTAGAAGCTCTCAGGGCTTGA---CCTCTGCCATGCTCAAGCTGGTCAGTCATGGTCCCCAAGGCCCTACAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1098034 324 + 1231380 ATCCAGCAATGTCCAGTGACAAGCTT-------GGACATACCTGC----AG-----TGG-GAGAGAGACCATG-CTGTCCCACCAG-CCCTTCACTTC-GGGGTCAGGCATTATTGGCGCCCTGCCAGTGGATGGCGGCTGTCGTGACAGATGTCAGCTGGGATGACA----TCTGGGCGCCTCCTGTAT-GGGGACTTATTTCTAGAGAAAGGGAAGACTGAGGTGTGACGT-GGGCCTGTGGGTAGGGAGACTGCATTCTGCCCACTGTGGAACGAATGCTAGAAGCTCTCAGGGCGTGA---CCTCTGCCATGCTCAAGCTGGTCAGTCATGGCCCCCGAGGCCCTACAG i cebCap1.NW_016107870v1 C 0 I 6 s aotNan1.NW_018500483v1 2627274 318 + 11732439 ATCCAGCAATGTCCAGTGATAAGCTC-------GGACATACGTGC----AG-----TGG-GAGAGAGACCACGCCTGTCCCACCGGCCCCTTCACTTCTGGGGTAAGGCGTTATTGGAGCCCTGCCAGTGGATGGCGACTGTCGTGACAGACGTCAGCTGG--------------GGACGTCCCCTGTACCGGGGACTCATTTCTAGAGAAAGGGAGGACTGAGGTGCGACGT-GGGCCTGTGAGTAGGGAGACTGCGTTCTGCCCACTGTGGAGCGAATGCTAGAAGCTCTCAGGGCGCGA---CCTCTGCCACGCTCAAGCTGGTCAGTCACGGTCCCCGAGGCCCCACAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22791842 316 + 22939663 CTCCAGCAATACTGAATGCCAAGCTTGAGAGGAGCACATATTTGC----AC-----TGA-GAAAGAGACCATGCTTCTTCCAccaacctcttcccttttgagatcaggcattagtagagc-ctgtcaatggacttcaagtgttctggtggatgttggctgggggaaa---------ggc--------tacaaggg------cccagggaaaggggaatttTGGGGTCTAAGGTAGGGCTTATGAGTGGGGACACTAATTTCTGAACACTGTGGGATTAACACTAGAAGTGCCAAGGTTTTGGA--TCTCTACCATGTTCCAGCTGATCTGCTGTGGTCCCTAA-CCCCTGTGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562566 193 + 47698779 ---CCACCAGGTGCCTGGCCCAGCTTGGGAGGACGACGGATTTGCCTGGAGCCTCTTGG-AGGAAAGACCG-----GTCCCAGCAGCCCCCTCTCTCCTGAGCTGAAAAGCTATTAGAGCCCCTCCCACAGGT-GTGCGCGTCTAGACTAA----AGCTGGTCGGAGA-------------CTCCTCCA---------------------------------------------GGGCCC-----------------------AACTCCACGGGA----------------------------------------GCTC-------------------------GCTCCACGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I a score=296992.000000 s hg38.chr20_KI270870v1_alt 54140 37 + 183433 cagcctgcagggatcagggcagcaaaggtgctgcaaa s panTro5.chr20 66379061 37 + 66533130 cagcctgcagggatcagggcagcaaaggtgctgcaaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059781 37 + 62195757 cagcctgcagggatcagggcagcaaaggtgctgcaaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445155 37 - 578057 cagcctgcagggatcagggcagcaaaggtgctgcaaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109972592 37 - 110113093 cagcctgcagggatcagggcagcaaagatgctgcaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92699418 37 - 92844088 caccctgcagggatcagggcagcaaaagtgctgcaaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366749 37 + 96509753 caccctgcagggatcagggcagcaaaagtgctgcaaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836565 37 - 16982598 caccctgcagggatcagggcagcaaaagtgctgcaaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639924 37 - 3785965 caccctgcagggatcagggcagcaaaagtgctgcaaa i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261631 37 - 90373283 caccctgcagggatcagggcagcaaaagtgctacaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18633 37 - 179258 caccctgcagggatcagggcagcaaaagtgctgcaaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5511991 37 - 5823884 caccctgcagggatcagggcagcaaaagtgctgcaaa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165669 37 + 159171411 cagcctgcagaggtcagggcagcaaaggtgctgcggc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231016 34 + 16356641 CA---tgcagaggtcagggcagcaaaggtgctgtggc i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2627592 21 + 11732439 CAGCCTGCAGAGGTCAGGGCA---------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22792158 36 + 22939663 CAGCCTGCCTGG-TCAGGATAGCAAAGGTGCTACAGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562759 9 + 47698779 -CGCCAGCAG--------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I e cebCap1.NW_016107870v1 1098358 6 + 1231380 I a score=1003144.000000 s hg38.chr20_KI270870v1_alt 54177 104 + 183433 accagcaagaccaacaggactgtacaagaccggtgttccacggcgacaccttgtggttgcaatggcagcagcactgcctgtggaaggacaaggctctcctgc-----ag s panTro5.chr20 66379098 104 + 66533130 accagcaagaccaacaggactgtacaagaccagtgttccacggcgacaccttgtggttgcaatggcagcagcactgcctgtggaaggacaaggctctcctgc-----ag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059818 104 + 62195757 accagcaagaccaacaggactgtacaagaccagtgttccacggcgacaccttgtggttgcaatggcagcagcactgcctgtggaaggacaaggctctcctgc-----ag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445192 104 - 578057 accagcaagaccaacaggactgtacaagaccagtgttccacggtgacaccttgtggttgcaatggcagcagcactgcctgtggaaggacaaggctctcctgc-----ag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109972629 103 - 110113093 accagcaagaccaacaggactgtacaagaccggtgttccatggtgacaccttgtggttgcaatggcagcagcactgccagtggaacgac-aggctctcctgc-----ag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92699455 104 - 92844088 accagcaagaccaacaggactgtacaagactggtgttccaccgtggcgccttgtgtttgcaatggcagcagcactgccggtggaatggagaggctctccggc-----ag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366786 104 + 96509753 accagcaagaccaacaggactgtacaagactggtgttccagcgtggcaccttgtgtttgcaatggcagcagcactgccggtggaatggagaggctctccggc-----ag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836602 104 - 16982598 accagcaagaccaacaggactgtacaagactgctgttccaccgtggcaccttgtggttgcaatggcagcagcactgccggtggaatggagaggctctccggc-----ag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3639961 104 - 3785965 accagcaagaccaacaggactgtacaagactggtgttccaccgtggcaccttgtggttgcaatggcagcagcactgccggtggaatggagaggctctccggc-----ag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261668 104 - 90373283 accagcaagaccaacaggactgtacaagactggtgttccaccgtggcaccttgtggttgcagtggcagcagcactgccagtggaatggagaggctctcctgc-----ag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18670 104 - 179258 accagcaagaccaacaggactgtacaagactggtgttccaccgtggcaccttgtggttgcaatggcagcagcactgccggtggaatggagaggctctccggc-----ag i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512028 104 - 5823884 accagcaagaccaacaggactgtacaagactggtgttccaccgtgacaccttgtggttgcaatggcagcagcactgccggtggaatggagaggctctcctgc-----ag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165706 104 + 159171411 accagcaagaccaacaggactgtacacgaccggtgttccacagcgacaccttgtggttgcactggcggcagcacggcctgtggagtggagacgctctcctgc-----gg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231050 104 + 16356641 acccgcgagaccagcagggctgtacacgacccgtgttcctcagcaacaccttgtggttgcgctggcagcagcacggcctgtggagtggagaggctgtcctgc-----gg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1098364 101 + 1231380 ACCAGCAAGACCAGCAgggctgtacacgacccgtgttccacagcgacaccttgtggtcgtac-ggcagcagcacggcctgtggagtggagag--tagcctgc-----gg i cebCap1.NW_016107870v1 I 6 C 0 s aotNan1.NW_018500483v1 2627613 99 + 11732439 -CCAGCGAGA-CAACAGGACTGAACCCGACCCGTGTTCCA-AGCGACACC-TGTGGTCGCACGGGCAGCAGCACGGCCTGTGGGGTGGAGAGGCTC-CCAGC-----GG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22792194 107 + 22939663 ACAGGCAAGAGAGACAGGGCTGTGGATGACCAGTGGTCAGCAGTGACACCTCGTGGCCATGATGG--ACAGCACCATCTGTGCAATGGGAAGGCTCTAGAGCTCCCTGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562768 99 + 47698779 ---AGCCAGGC--ACAGGGCTGTGCAGGACACGCGGTCCACAGTGGCACCTGGTGGCCATAAGTGGAGTGGCACACCCTGGGGGGGGACTGAGTCCCTTTCT-----GG i canFam3.chr24 C 0 I 33 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I a score=80672.000000 s hg38.chr20_KI270870v1_alt 54281 7 + 183433 ctcctcc s panTro5.chr20 66379202 7 + 66533130 ctcctcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059922 7 + 62195757 ctcctcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445296 7 - 578057 ctcctcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109972732 7 - 110113093 ctcctcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92699559 7 - 92844088 ctcctcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366890 7 + 96509753 ctcctcc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836706 7 - 16982598 ctcctcc i macNem1.NW_012014244v1 C 0 I 29 s cerAty1.NW_012001373v1 3640065 7 - 3785965 ctcctcc i cerAty1.NW_012001373v1 C 0 I 29 s chlSab2.chr2 90261772 7 - 90373283 ctcctcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18774 7 - 179258 ctcctcc i manLeu1.NW_012101652v1 C 0 I 29 s colAng1.NW_012114444v1 5512132 7 - 5823884 ctcctcc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165810 7 + 159171411 ctcctcc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231154 7 + 16356641 ctcctcc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1098465 7 + 1231380 ctcctcc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627712 7 + 11732439 CTCCTCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22792301 6 + 22939663 GTCCTC- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e canFam3.chr24 47562867 33 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I a score=20038.000000 s hg38.chr20_KI270870v1_alt 54288 4 + 183433 ctac s panTro5.chr20 66379209 4 + 66533130 ctac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059929 4 + 62195757 ctac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445303 4 - 578057 ctac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109972739 4 - 110113093 ctac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92699566 3 - 92844088 -tac i rheMac8.chr10 C 0 I 17 s macFas5.chr10 96366897 3 + 96509753 -tac i macFas5.chr10 C 0 I 17 s chlSab2.chr2 90261779 4 - 90373283 ctac i chlSab2.chr2 C 0 I 26 s colAng1.NW_012114444v1 5512139 4 - 5823884 ctac i colAng1.NW_012114444v1 C 0 I 18 s calJac3.chr5 58165817 4 + 159171411 ctgc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231161 4 + 16356641 ctgc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1098472 4 + 1231380 cggc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627719 4 + 11732439 CTGC i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e canFam3.chr24 47562867 33 + 47698779 I e cerAty1.NW_012001373v1 3640072 29 - 3785965 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I e manLeu1.NW_012101652v1 18781 29 - 179258 I e macNem1.NW_012014244v1 16836713 29 - 16982598 I e otoGar3.GL873542 22792307 0 + 22939663 C a score=13307.000000 s hg38.chr20_KI270870v1_alt 54292 4 + 183433 cagg s panTro5.chr20 66379213 4 + 66533130 cacg i panTro5.chr20 C 0 I 23 s panPan2.chr20 62059933 4 + 62195757 cagg i panPan2.chr20 C 0 I 23 s gorGor5.CYUI01015848v1 445307 4 - 578057 cagg i gorGor5.CYUI01015848v1 C 0 I 23 s nomLeu3.chr13 109972743 4 - 110113093 cagg i nomLeu3.chr13 C 0 I 23 s rheMac8.chr10 92699586 4 - 92844088 ctgg i rheMac8.chr10 I 17 I 5 s macFas5.chr10 96366917 4 + 96509753 ctgg i macFas5.chr10 I 17 I 5 s colAng1.NW_012114444v1 5512161 4 - 5823884 ctgg i colAng1.NW_012114444v1 I 18 I 5 s calJac3.chr5 58165821 4 + 159171411 caga i calJac3.chr5 C 0 I 23 s saiBol1.JH378156 16231165 4 + 16356641 caga i saiBol1.JH378156 C 0 I 23 s cebCap1.NW_016107870v1 1098476 4 + 1231380 caga i cebCap1.NW_016107870v1 C 0 I 23 s aotNan1.NW_018500483v1 2627723 4 + 11732439 CAGA i aotNan1.NW_018500483v1 C 0 I 23 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e canFam3.chr24 47562867 33 + 47698779 I e cerAty1.NW_012001373v1 3640072 29 - 3785965 I e chlSab2.chr2 90261783 26 - 90373283 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I e manLeu1.NW_012101652v1 18781 29 - 179258 I e macNem1.NW_012014244v1 16836713 29 - 16982598 I e otoGar3.GL873542 22792307 0 + 22939663 C a score=264286.000000 s hg38.chr20_KI270870v1_alt 54296 27 + 183433 ctttggactaagcctccagcatttttg s panTro5.chr20 66379240 27 + 66533130 ctttggactaagcctccagcatttttg i panTro5.chr20 I 23 C 0 s panPan2.chr20 62059960 27 + 62195757 ctttggactaagcctccagcatttttg i panPan2.chr20 I 23 C 0 s gorGor5.CYUI01015848v1 445334 27 - 578057 ctttggactaagcctccagcatttttg i gorGor5.CYUI01015848v1 I 23 C 0 s nomLeu3.chr13 109972770 27 - 110113093 cgttggactaagcctccagcatttttg i nomLeu3.chr13 I 23 C 0 s rheMac8.chr10 92699595 27 - 92844088 ctttggactaagcctccagcatttttg i rheMac8.chr10 I 5 C 0 s macFas5.chr10 96366926 27 + 96509753 ctttggactaagcctccagcatttttg i macFas5.chr10 I 5 C 0 s macNem1.NW_012014244v1 16836742 27 - 16982598 ctttggactaagcctccagcatttttg i macNem1.NW_012014244v1 I 29 C 0 s cerAty1.NW_012001373v1 3640101 27 - 3785965 ctttggactaagcctccagcatttttg i cerAty1.NW_012001373v1 I 29 C 0 s chlSab2.chr2 90261809 27 - 90373283 ctttggactaagcctccagcatttttg i chlSab2.chr2 I 26 C 0 s manLeu1.NW_012101652v1 18810 27 - 179258 ctttggactaagcctccagcatttttg i manLeu1.NW_012101652v1 I 29 C 0 s colAng1.NW_012114444v1 5512170 27 - 5823884 ctttggactaagcctccagcatttttg i colAng1.NW_012114444v1 I 5 C 0 s calJac3.chr5 58165848 27 + 159171411 ctttggactaagcctccagcatttttg i calJac3.chr5 I 23 C 0 s saiBol1.JH378156 16231192 27 + 16356641 ctttggactaagcctccagcatttttg i saiBol1.JH378156 I 23 C 0 s cebCap1.NW_016107870v1 1098503 27 + 1231380 ctttgcaccaagcctccagcatttttg i cebCap1.NW_016107870v1 I 23 C 0 s aotNan1.NW_018500483v1 2627750 5 + 11732439 C----------------------TTTG i aotNan1.NW_018500483v1 I 23 C 0 s otoGar3.GL873542 22792307 26 + 22939663 CTCTGGACTGAGCC-CTTTCACCTCTG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e canFam3.chr24 47562867 33 + 47698779 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I a score=942778.000000 s hg38.chr20_KI270870v1_alt 54323 94 + 183433 gacagttggcatgcatgttggaggagagtacttgagaaggaaataatgggctgggtgctaatagaggatttggaggctcacacactaaatgggg s panTro5.chr20 66379267 94 + 66533130 gacaattggcatgcatgttggaggagagtacttgagaaggaaataatgggcttggtgctaatagagggtttggaggctcacacactaaatgggg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62059987 94 + 62195757 gacaattggcatgcatgttggaggagagtacttgagaaggaaataatgggcttggtgctaatagagggtttggaggctcacacactaaatgggg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445361 94 - 578057 gacaattggcatgcatgttggaggagagtacttgagaaggaaataatgggcttggggctaatagagggtttggaggcttgcacactaaacgggg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109972797 94 - 110113093 gacaatcggcatgcatgttggaggagagtacttgagaaggaaataatggacgtggtgctaatagagggtttggaggctcgcacactaaatgggg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92699622 94 - 92844088 gacaatcagcatgcatgttggaggagagtacttgagaaggaaataatggacttggtgctaatacagggtttggaggctcgcacactaaatgggg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96366953 94 + 96509753 gacaatcagcatgcatgttggaggagagtacttgagaaggaaataatggacttggtgctaatacagggtttggaggctcgcacactaaatgggg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836769 93 - 16982598 gacaatcagcatgcatgttggaggagagtacttgagaaggaaataatggacttggtgctaataca-ggtttggaggctcgcacactaaatgggg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640128 94 - 3785965 gacaatcagcatgcatgttggaggagagtacttgagaaggaaataatggacttggtgctaaaacagggtttggaggctcgcacactaaatgggg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261836 94 - 90373283 gacaatcagcacgcatgttggaggaaagtacttgagaaggaaataatggacttggtgctaatacagggtttggaggctcgcacactaaatgggg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18837 94 - 179258 gacaatcagcatgcatgttggaggagagtacttgagaaggaaataacggacttggtgctaatacagggtttggaggctcgcacactaaatgggg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512197 94 - 5823884 gacaatcagtatacatgttggaggagagtacttgagaaggaaataatggacttggtgctaatacagggtttggaggctcgcacactaaatgggg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58165875 90 + 159171411 gacaattggcatgca---tggaggagagtacttgagaaggaaattatagacttggtgccattagagggtttgg-gacttgcacactaaatgagg i calJac3.chr5 C 0 I 41 s saiBol1.JH378156 16231219 94 + 16356641 gacaattggcatgcatgttggaggagagtacttgagaaggaaattatagatttggtgctaatagagggtctggaggcttgcacactaactgggg i saiBol1.JH378156 C 0 I 48 s cebCap1.NW_016107870v1 1098530 94 + 1231380 gacaattggcatgcatgttggagcagagcacttgagaaggaaatcatagacttggtggtaatagagggtctggaggcttgcacactaagtgggg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627755 94 + 11732439 GACAATTGGCGTGCGTGTTGGAGGACGGTGCTTGAGAAGGGAATTACAGACTCGGTGCTGATAGAGGGTTTGGAGGCTTGCACACTAAATGGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22792333 66 + 22939663 TACAGTTGGTGTGCA--------------------------AAGCACAGACTC--TGCTGGTAGAGAGTGTGGAGGCTTTCATATGAGCTGCAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47562900 83 + 47698779 GACAGCGAGAGCGCATGTTGGAGGAGAAGGCCT-AGAAGGAAGGGGTGGACTCTGTGCCCGCGGAGTGACCGG--------ACACCGAGGGC-- i canFam3.chr24 I 33 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I a score=10424.000000 s hg38.chr20_KI270870v1_alt 54417 1 + 183433 a s panTro5.chr20 66379361 1 + 66533130 a i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060081 1 + 62195757 a i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445455 1 - 578057 a i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109972891 1 - 110113093 a i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92699716 1 - 92844088 a i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367047 1 + 96509753 a i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836862 1 - 16982598 a i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640222 1 - 3785965 a i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261930 1 - 90373283 a i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18931 1 - 179258 a i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512291 1 - 5823884 a i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166006 1 + 159171411 A i calJac3.chr5 I 41 C 0 s cebCap1.NW_016107870v1 1098624 1 + 1231380 a i cebCap1.NW_016107870v1 C 0 I 55 s aotNan1.NW_018500483v1 2627849 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 I 49 s otoGar3.GL873542 22792399 1 + 22939663 A i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47562983 1 + 47698779 G i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I e saiBol1.JH378156 16231313 48 + 16356641 I a score=233665.000000 s hg38.chr20_KI270870v1_alt 54418 52 + 183433 aGGACTCATTCAT-------------ACCCATTCCTTCTTCC--------------GAAATGTCTCCTTCCATGTCCTG s panTro5.chr20 66379362 41 + 66533130 aGGATTCATTCAT-------------ACCCATTCCTTCTTCC--------------GAAATGTTTCCT----------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060082 41 + 62195757 aGGATTCATTCAT-------------ACCCATTCCTTCTTCC--------------GAAATGTTTCCT----------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445456 40 - 578057 aGGATTCATTCGT-------------ACCCATTCCTTCTTCC--------------GAAATGTTTCC------------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109972892 41 - 110113093 aGGATTCATTCAT-------------ACCCATTCCTCCTTCC--------------CAAATGTTTCCT----------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92699717 41 - 92844088 aGGATTCATTCAT-------------ACCCATTCCTCCTTCC--------------CAAATGTTTCCT----------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367048 41 + 96509753 aGGATTCATTCAT-------------ACCCATTCCTCCTTCC--------------CAAATGTTTCCT----------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836863 41 - 16982598 aGGATTCATTCAT-------------ACCCATTCCTCCTTCC--------------CAAATGTTTCCT----------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640223 41 - 3785965 aaGATTCATTCAT-------------ACCCATTCCTCCTTCC--------------CAAATGTTTCCT----------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261931 41 - 90373283 aGGATTCATTCAT-------------ACCCATTCCTCCTTCC--------------CAGATGTTTCCG----------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18932 41 - 179258 aGGATTCATTCAT-------------ACCCATTCCTCCTTCC--------------CAAATGTTTCCT----------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512292 41 - 5823884 aGGATTCATTCGT-------------ACCCATTCCTCCTTCC--------------CAAATGTTTCCT----------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166007 41 + 159171411 GGGAGTCATTCAT-------------TCCCGTTCCTCCTTCC--------------CAAATGTTTCCT----------- i calJac3.chr5 C 0 C 0 s otoGar3.GL873542 22792401 53 + 22939663 ACAACCC--TCAC-------------GACCATGTTTCCTTGCTTTGAGCTGATGAAGAGGTCATTCAT----------- i otoGar3.GL873542 I 1 I 5 s canFam3.chr24 47562984 44 + 47698779 ATGGCGCGCTTATCAGAGAAACAAAAACCCGCTTTTGCATCT--------------TG--------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I e saiBol1.JH378156 16231313 48 + 16356641 I e cebCap1.NW_016107870v1 1098625 55 + 1231380 I e aotNan1.NW_018500483v1 2627850 49 + 11732439 I a score=-70.000000 s hg38.chr20_KI270870v1_alt 54470 3 + 183433 CCC s saiBol1.JH378156 16231361 1 + 16356641 --c i saiBol1.JH378156 I 48 I 2 s canFam3.chr24 47563028 3 + 47698779 GGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e cerAty1.NW_012001373v1 3640264 0 - 3785965 C e colAng1.NW_012114444v1 5512333 0 - 5823884 C e chlSab2.chr2 90261972 0 - 90373283 C e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I e panPan2.chr20 62060123 0 + 62195757 C e gorGor5.CYUI01015848v1 445496 0 - 578057 C e manLeu1.NW_012101652v1 18973 0 - 179258 C e macNem1.NW_012014244v1 16836904 0 - 16982598 C e cebCap1.NW_016107870v1 1098625 55 + 1231380 I e calJac3.chr5 58166048 0 + 159171411 C e aotNan1.NW_018500483v1 2627850 49 + 11732439 I e panTro5.chr20 66379403 0 + 66533130 C e nomLeu3.chr13 109972933 0 - 110113093 C e rheMac8.chr10 92699758 0 - 92844088 C e otoGar3.GL873542 22792454 5 + 22939663 I e macFas5.chr10 96367089 0 + 96509753 C a score=684.000000 s hg38.chr20_KI270870v1_alt 54473 6 + 183433 TCGTAC s saiBol1.JH378156 16231364 6 + 16356641 TCATTC i saiBol1.JH378156 I 2 C 0 s aotNan1.NW_018500483v1 2627899 6 + 11732439 TCGTTC i aotNan1.NW_018500483v1 I 49 C 0 s canFam3.chr24 47563031 6 + 47698779 CTGTGA i canFam3.chr24 C 0 I 4 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e cerAty1.NW_012001373v1 3640264 0 - 3785965 C e colAng1.NW_012114444v1 5512333 0 - 5823884 C e chlSab2.chr2 90261972 0 - 90373283 C e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I e panPan2.chr20 62060123 0 + 62195757 C e gorGor5.CYUI01015848v1 445496 0 - 578057 C e manLeu1.NW_012101652v1 18973 0 - 179258 C e macNem1.NW_012014244v1 16836904 0 - 16982598 C e cebCap1.NW_016107870v1 1098625 55 + 1231380 I e calJac3.chr5 58166048 0 + 159171411 C e panTro5.chr20 66379403 0 + 66533130 C e nomLeu3.chr13 109972933 0 - 110113093 C e rheMac8.chr10 92699758 0 - 92844088 C e otoGar3.GL873542 22792454 5 + 22939663 I e macFas5.chr10 96367089 0 + 96509753 C a score=1069.000000 s hg38.chr20_KI270870v1_alt 54479 3 + 183433 CCA s saiBol1.JH378156 16231370 3 + 16356641 CCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1098680 3 + 1231380 CCG i cebCap1.NW_016107870v1 I 55 C 0 s aotNan1.NW_018500483v1 2627905 3 + 11732439 CCA i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47563041 2 + 47698779 -CC i canFam3.chr24 I 4 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e cerAty1.NW_012001373v1 3640264 0 - 3785965 C e colAng1.NW_012114444v1 5512333 0 - 5823884 C e chlSab2.chr2 90261972 0 - 90373283 C e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e dasNov3.JH569290 197053 143 - 397369 I e panPan2.chr20 62060123 0 + 62195757 C e gorGor5.CYUI01015848v1 445496 0 - 578057 C e manLeu1.NW_012101652v1 18973 0 - 179258 C e macNem1.NW_012014244v1 16836904 0 - 16982598 C e calJac3.chr5 58166048 0 + 159171411 C e panTro5.chr20 66379403 0 + 66533130 C e nomLeu3.chr13 109972933 0 - 110113093 C e rheMac8.chr10 92699758 0 - 92844088 C e otoGar3.GL873542 22792454 5 + 22939663 I e macFas5.chr10 96367089 0 + 96509753 C a score=574819.000000 s hg38.chr20_KI270870v1_alt 54482 95 + 183433 TTCCTTCTTCCGA-AATGTCTCCCTCCATGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGCTGGTGGGGGAACAGATGTGGCGTAATCACGTCG s panTro5.chr20 66379403 72 + 66533130 ------------------------TCCATGTCCT------------------------GCCCAGGCCTGCTTTTTGGGTCTCCTGGCTGGTGGGGGAACAGATGTGGCGTAATCACGTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060123 72 + 62195757 ------------------------TCCATGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGCTGGTGGGGGAACAGATGTGGCGTAATCACGTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445496 73 - 578057 -----------------------TTCCATGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGCTGGTGGGGGAACAGATGTGGCGTAATCACGTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109972933 72 - 110113093 ------------------------TCCATGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGCTGGTGGGGGAACAGATGTGGCGTAATCACGTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92699758 70 - 92844088 ------------------------TCCGTGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGGTG--GGGGGAACAGATGTGGCGTAATCACATTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367089 70 + 96509753 ------------------------TCCGTGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGGTG--GGGGGAACAGATGTGGCGTAATCACATTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836904 70 - 16982598 ------------------------TCCGTGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGGTG--GGGGGAACAGATGTGGCGTAATCACATTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640264 70 - 3785965 ------------------------TCCGTGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGGTG--GGGGGAACAGATGTGGCATAATCACATTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90261972 70 - 90373283 ------------------------TCTGTGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGGTG--GGGGGAACAGATGTGGCGTAATCACATGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 18973 70 - 179258 ------------------------TCCGTGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGGTG--GGGGGAACAGATGTGGCATAATCACATTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512333 70 - 5823884 ------------------------TCCATGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGGGTG--GGGGGAACAGATGTGGCGTAATCACGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166048 53 + 159171411 ------------------------TCCATATCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGAGTT-------------------GTAATCTCTTTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231373 76 + 16356641 TTCCTCCTTCCCA-AATGTTTCCTTCCACGTCCT------------------------GCCCAGACCTGCGCTTTGGGTCTCCTGAGAT-------------------GTAATCTCTTTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1098683 76 + 1231380 TTCCTCCTTCCCA-AATGTTTCCTTCCACGTCCT------------------------GCCCAGGCCTGCTCTTTGGGTCTCCTGAGAT-------------------GTAATCGCTTTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627908 76 + 11732439 TTCCTCCTTCCCA-GATGTTTCCCTCCACGTCCT------------------------GCCCGGGCCTGGTCTTTGGGTCTACCGGGAT-------------------GTAATCTCATTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22792459 88 + 22939663 ---CTCCTTCCCA-AATGCT----TCCTGGTTCT------------------------GGCTAGGCCTGCCTTGCAGGTCTCCTGGCTGGTGGTGGAACAGACCTGTCATAATCATGTTG i otoGar3.GL873542 I 5 C 0 s canFam3.chr24 47563043 115 + 47698779 ACTCACCTCCCCA-GATGTGT---CCCGGCTCCTTCCCTGGAGTCTGGGGGGGGAATGGGCCGGGCCTGCT-TTCGGGTCTCCTGCTCAGGTGCAGAGCAAATGTGTCACAGCCACGTCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 197196 95 - 397369 TCCCTTCTCCTCACAAGGCCCTTTTGTGGATCTA------------------------GCCCAGGTCTGCTTTGAGGGTCTCCTGGATG-GTGGGGAGCAGACCTGTCAGAATTGCATCA i dasNov3.JH569290 I 143 I 132 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I a score=1742741.000000 s hg38.chr20_KI270870v1_alt 54577 186 + 183433 AGATGCAGCAGGTGCACCAAGCACTGTGCGCACCGCTGTTAGCCCCAGGA-CCCCCAG---TGTCAGCA-----------CTGGTGGGGCT-GGTGT-TTGTGGAGTGTGTCAGTGGACTGGCAGGC--------------CCGTGGATTCC-ACGTGTGTAAGAGAGACTG-ACAGCCCT-TCCTGTCTCAGAGCAGCCCCtcctgggtccca-----------------------------------tcctgg s panTro5.chr20 66379475 186 + 66533130 AGATGCAGCAGGTGCACCAAGCACTGTGTGCACTGCTGTTACCCCCAGGA-CCCCCAG---TGTCAGCA-----------CTGGTGGGGCT-GGTGT-TTGTGGAGTGTGTCAGTGGACTGGGAGGC--------------CCGTGGATTCC-ACGTGTGTAAGAGAGACTG-ACAGCCCT-TCCTGTCTCAGAGCAgtccctcctgggtccca-----------------------------------tcctgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060195 186 + 62195757 AGATGCAGCAGGTGCACCAAGCACTGTGTGCACTGCTGTTACCCCCAGGA-CCCCCAG---TGTCAGCA-----------CTGGTGGGGCT-GGTGT-TTGTGGAGTGTGTCAGTGGACTGGGAGGC--------------CCGTGGATTCC-ACGTGTGTAAGAGAGACTG-ACAGCCCT-TCCTGTCTCAGAGCAgtccctcctgggtccca-----------------------------------tcctgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445569 184 - 578057 AGATGCAGCAGGTGCACCAAGCACTGTGCACCCTGCTGTTA-CCCCAGGA-CCCCCAG---TGTCAGTA-----------CTGGTGGGGCT-GGTGT-TTGTGGAGTGTGTCAGTGGACTGGCAGGC--------------CCGTGGATTCC-ACGTGTGTAAGAGAGACTG-ACAGCCCT-TCCTGTCTCAGAGCAGCCCCTCCTGGGTCCCA-----------------------------------TCCT-G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973005 186 - 110113093 AGATGCAGCAGGTGCACCAAGCACTGTGCGCACTGCTGTTACCCCCGGGA-CCCCCAG---TGTCAGCA-----------CTGGTGGGGCT-GGTGT-TTGTGGAGTGTGTCAGTGGACTGGCAGGC--------------CCATGGATTCC-ACATGTGTAAGACAGACTG-ACAGCCCT-TCCTGTCTCAGAGCAGCCCCTCCTGGGTCCCA-----------------------------------TCCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92699828 196 - 92844088 AGATGCAGCAGGTGCACCAAGCACTGTGGGCACTGCTGTTACCCCCAGGA-CCCCCAG---TGTCAGCACT-AGCCCGGCCTGGTGGGGCT-GGTGT-TTGTGGACTGTGTCAGTGGACCAGCAGGC--------------CCGTGGATTCC-ACGTGTGTGAGAGAGACGG-ACAGCCCT-TCCTGTCTCAGAGCAGCCCCTGCTGTGTCCCA-----------------------------------TCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367159 196 + 96509753 AGATGCAGCAGGTGCACCAAGCACTGTGGGCACTGCTGTTACCCCCAGGA-CCCCCAG---TGTCAGCACT-AGCCCGGCCTGGTGGGGCT-GGTGT-TTGTGGACTGTGTCAGTGGACCAGCAGGC--------------CCGTGGATTCC-ACGTGTGTGAGAGAGACGG-ACAGCCCT-TCCTGTCTCAGAGCAGCCCCTGCTGTGTCCCA-----------------------------------TCCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16836974 196 - 16982598 AGATGCAGCAGGTGCACCAAGCACTGTGGGCACTGCTGTTACCCCCAGGA-CCCCCAG---TGTCAGCACT-AGCCCGGTCTGGTGGGGCT-GGTGT-TTGTGGACTGTGTCAGTGGACCAGCAGGC--------------CCGTGGATTCC-ACGTGTGTGAGAGAGACGG-ACAGCCCT-TCCTGTCTCAGAGCAGCCCCTGCTGTGTCCCA-----------------------------------TCCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640334 196 - 3785965 AGATGCAGCAGGTGCACCAAGCACTGTGGGCACTGCTGTTACCCCCAGGA-CCCCCAG---TGTCAGCACT-AGCCCGGCCTGGTGGGGCT-GGTGT-TTGTGGACTGTGTCAGTGGACCAGCAGGC--------------CCGTGGATTCC-ACGTGTGTGAGAGAGACGG-ACAGCACT-TCCTGTCTCAGAGCAGCCCCTGCTGTGTCCCA-----------------------------------TCCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262042 196 - 90373283 AGATGCAGCAGGTGCACCAAGCACTGTGGGCACTGCTGTTACCCCCAGGC-CCCCCAG---TATCAGCACT-AGCCCGGCCTGGTGGGGCT-GGTGT-TTGTGGAGTGTGTCAGTGGACCAGCAGGC--------------CCGTGGATTCC-ACGTGTGTGAGAGAGACGG-ACAGCCCT-TCTTGTCTCAGAGCAGCCCCTCCTGTGTCCCA-----------------------------------TCCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19043 196 - 179258 AGATGCAGCAGGTGCACCAAGCACTGTGGGCACTGCTGTTACCCCCAGGA-CCCCCAG---TGTCAGCACT-AGCCCGGCCTGGTGGGGCT-GGTGT-TTGTGGACTGTGTCAGTGGACCAGCAGGC--------------CCGTGGATTCC-ACGTGTGTGAGAGAGACGG-ACAGCCCT-TCCTGTCTCAGGGCAGCCCCTGCTGTGTCCCA-----------------------------------TCCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512403 231 - 5823884 AGATGCAGCAGGTGCACCAAGCACTGTGGGCCCTGCTGTTACCCCCAGGA-CCCCCAG---TGTCAGCACT-AGCCTGGCCTGGTGGGGCT-GGTGT-TTGTGGAGTGTGTCAGTGTACCCGCAGGC--------------CCGTGGATTCC-ACGTGTGTGAGAGAGACGG-ACAGCCCT-TCCTGTCTCAGAGCAGCCCCtcctgtgtcccatcctgggtccctcctgggtcccgtcctgggtcctgtcctgg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166101 193 + 159171411 AGATGCAGCAGGTGCACCAAGCACTCTGGGAGCTGTCGTTACTCCCAGGACCCCCCAG---TGTCAGCACT-GGTCAGGCCTGGTGGGGCT-GGTGT-TTGTGGAGTGTGTCCGTGGACCAGCAGGC--------------CCATGGACCCC-ACATGCGTAAAAGAGACTG-ACAGCCTT-TCCTGTCCTACAGCAGCCCCTCCTGTGCCCTG-----------------------------------GC---- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231449 192 + 16356641 AGGTGCAGCAGGTGCACCAAGCACTCTGGGAGCTGCCGTTACCCCCAGGA-CCCCCAG---TGTCAGCACT-GGCCGGGCCTGGCGGGGCT-GGTGT-TTGTGGAGTGTGTCCGTGGACCAGCAGGC--------------CCGTGGACCCC-ATATGCGTAAGGGAGACTG-ACAGCCCT-TCCTGTCCCGTAGCAGCCCCTCCTGTGCCCCG-----------------------------------GC---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1098759 191 + 1231380 AGGT-CAGCAGGTGCACCAAGCACTCTGGGAGCTGCCGTTACCCCCAGGA-CCGCCAG---TGTCAGCACT-GGCCAGGCCTGGTGGGGCT-GGTGT-TTGTGGAGTGTGTCTGTGGACCAGCAGGC--------------CTGTGGACCCC-ACATGCATAAAAGAGACTG-ACAGCCCT-TCCTGTCCCACGGCAGCCCCTCCTGTGCCCCA-----------------------------------GC---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2627984 183 + 11732439 AGATGCAGCAGGTGCACCAAGCTCTCTGGGAGCTGCTGTTACCCCCAGGA-CCCCCAG---TGTCAGCACT-GGCCAGGC---------CT-GGTGT-TTGTGGAGTGTGTCCGTGGACCAGCAGGC--------------CCGTGGAACCC-ACGTGCGTAAGAGAGACTG-ACAGCCCT-TCCTGTCCCACAGCAGCCCCTCCTGTGCCCCG-----------------------------------GC---- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22792547 186 + 22939663 AGATGT----GGTGCACAGAGGGCTGTGGGATCTG--AGTGACCAGAAGC-CGCTCA------TCAGCACTGGGCCTGGCACGCTGGGGCT-GATATCCCGTGGGATCCATCAGTGAACT-GTAGAC--------------TGGTGAATGGC-ACATGTATAAGAAAGATTA-ATCCCCCTGTCTTATCCCATGCCAGCCCCACCCATGTCACA-----------------------------------TCC--- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47563158 146 + 47698779 ACGTGAGGCGGGTGGGCTG--------------------------CAGGG-CCCCTGG---TCCCGG-----GCCCAGGCCTGTCCGG----GGGAT-TCGTCGGGTACACCCGGCGGCCGGTGCGCTGGGCTGCATGATGCCGTGGGCTGT-GTGCGTGGAGGGAGCGCGGCCCGGCCCG-TCCTGT------------------------------------------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 197423 166 - 397369 aaaTAGGGCAGGTGCACAAAGCAC-----------------CACCCAGGG-GCCCTTGAACCCCCAGCCCT-GGCCTGCTATGTGGGGACTCGATGT-TTGTTGACTGCCTCCATGCACT-TCAGGC--------------TCGGGAAGCCCGAGGGGCCTGGTGGGCGCCT-CTGAGCCC-TCCTGTCC-------GTCCTTGCCTCGT--------------------------------------------- i dasNov3.JH569290 I 132 C 0 e proCoq1.NW_012150197v1 1812986 865 - 2029793 I e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I a score=139843.000000 s hg38.chr20_KI270870v1_alt 54763 19 + 183433 gtcccatcttgggGTTGGA s panTro5.chr20 66379661 19 + 66533130 gtcccatcttgggGTTGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060381 19 + 62195757 gtcccatcttgggGTTGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445753 19 - 578057 GTCCCATCTTGGGGTTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973191 19 - 110113093 GTCCCCTCTTGGGGTTGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700024 19 - 92844088 GTCCTATCCTGGGGTTGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367355 19 + 96509753 GTCCTATCCTGGGGTTGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837170 19 - 16982598 GTCCTATCCTGGGGTTGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640530 19 - 3785965 GTCCTATCCTGGGGTTGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262238 19 - 90373283 GTCCTATCCTGGGGTTGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19239 19 - 179258 GTCCTATCCTGGGGTTGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512634 19 - 5823884 gtcccctcctgggGTTGGA i colAng1.NW_012114444v1 C 0 C 0 s proCoq1.NW_012150197v1 1813851 19 - 2029793 GTCCCCTCCTGGGGTTGGA i proCoq1.NW_012150197v1 I 865 C 0 s otoGar3.GL873542 22792733 10 + 22939663 ---------TGGGGATGGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47563304 5 + 47698779 --------------TCGGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 197589 19 - 397369 GGCCTGTCCTGGTGTTTGT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181750326 1625 + 182113224 I e micMur3.chr18 56806616 1007 + 57149010 I e saiBol1.JH378156 16231641 0 + 16356641 C e cebCap1.NW_016107870v1 1098950 0 + 1231380 C e calJac3.chr5 58166294 0 + 159171411 C e aotNan1.NW_018500483v1 2628167 0 + 11732439 C a score=712931.000000 s hg38.chr20_KI270870v1_alt 54782 64 + 183433 -CATGCCCTTG-TTTGAGCTTGG-CCCCTTCTTGCTGGGC-CACCAGCCC-TGACCCTAAATCTGAGAG s panTro5.chr20 66379680 64 + 66533130 -CATGCCCTTG-TTTGAGCTTGG-CCCCTTCTTGCTGGGC-CACCAGCCC-TGACCCTAAATCTGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060400 64 + 62195757 -CATGCCCTTG-TTTGAGCTTGG-CCCCTTCTTGCTGGGC-CACCAGCCC-TGACCCTAAATCTGAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445772 64 - 578057 -CATGCCCTTG-TTTGAGCTTGG-CCCCTTCTTGCTGGGC-CACCAGCCC-TGACCCTAAATCTGAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973210 64 - 110113093 -CATGCCCTTG-TTTGAGCTTGG-CCCCTTCCTGCTGGGC-CACCAGCCC-TGACCCTACATCTGGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700043 64 - 92844088 -CATGCTCTTG-TTGGAACTTGG-CCCCTTCTTGCTGGGT-CACCAGCCC-TGACCCTAAATGTGAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367374 64 + 96509753 -CATGCTCTTG-TTGGAACTTGG-CCCCTTCTTGCTGGGT-CACCAGCCC-TGACCCTAAATGTGAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837189 64 - 16982598 -CATGCTCTTG-TTGGAACTTGG-CCCCTTCTTGCTGGGT-CACCAGCCC-TGACCCTAAATGTGAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640549 64 - 3785965 -CATGCTCTTG-TTGGAACTTGG-CCCCTTCTTGCTGAGT-CACCAGCCC-TGACCCTAAATCTGAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262257 64 - 90373283 -CATGCTCTTG-TTGGAACTTGG-CCCCTTCTTGCTGGGT-CACCAGCCC-TGACCCTAAATCTGAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19258 64 - 179258 -CATGCTCTTG-TTGGAACTTGG-CCCCTTCTTGCTGGGT-CACCAGCCC-TGACCCTAAATCTGAGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512653 64 - 5823884 -CATGCTCTTG-TTGGGACTCGG-CCCCTTCTTGCTGGGT-CACCAGCCC-TGACCCTAAATCTGAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166294 62 + 159171411 ---TGCCCTTG-TTTCAGCTTGG-CCCCTTCTTGCTGGGT-CACCAGTCC-TGACCCTAAATCTGAGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231641 60 + 16356641 ---TGCCCTTG-TTTCAGCCTGG-TCCCTTCTTGCTGGGT-CACCAGTCC-TGACTC--AGTCTGGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1098950 62 + 1231380 ---TGCCCTTG-TTTCAGCTTGG-CCCCTTCTTGCTGGGT-CACCAGTCC-TGACCCTAAATCTGGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628167 62 + 11732439 ---TGCCCTTG-TTTCAGCTTGG-CCCCTTCTTGCTGGGT-CACCAGTCC-TGACCCTGAATCTGAGAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1813870 60 - 2029793 -CACGCCCTGG-TGTGAGGTTGG-CCCCTTCTCCCTGAGTCCACCAGCTC-CGACCCCAGAGCA----- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22792743 64 + 22939663 -CACACCCTGG-TTTAAGGTTGG-CCTTCTCTTGCAGAGTCCACTAGCCC-CAACTCCAAATCTGGCT- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181751951 55 + 182113224 -cacaccatgg-TGCCAGCTTTC-CCCCTTTT---------AGCCAGTCT-CAACCCT-AATCTGGCAG i mm10.chr2 I 1625 C 0 s canFam3.chr24 47563309 59 + 47698779 -GACTCCCTGG-CTCT-GTCTGG-CCCCTCCCCCC------CCTCGGCCCACGACTCCAGGGCTGGCAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 197608 67 - 397369 GAACTCCCTGGCTTCGAGCCTGGCCCCCTTCTTCCTGAGTCCACTAGCTC-CAGACC-AAGTCTGGTAG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56806616 1007 + 57149010 I a score=944736.000000 s hg38.chr20_KI270870v1_alt 54846 77 + 183433 GGGGCTTGGCTG-GGCCTGGGGTCAGGGGACAAACAGCCACCCTGGC-TGAGGCCCTGGGCAG-CTGAGGAACTTCAGCC s panTro5.chr20 66379744 77 + 66533130 GGGGCTTGGCTG-GGCCTGGGGTCAGGGGACAAACAGCCACCCTGGC-TGAGGCCCTGGGCAG-CTGAGGAACTTCAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060464 77 + 62195757 GGGGCTTGGCTG-GGCCTGGGGTCAGGGGACAAACAGCCACCCTGGC-TGAGGCCCTGGGCAG-CTGAGGAACTTCAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445836 77 - 578057 AGGGCTTGGCTG-GGCCTGGGGTCAGGGGACAAACAGCCACCCTGGC-TGAGGCCCTGGGCAG-CTGAGGAACTTCAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973274 63 - 110113093 GGGGCTTGGCTG-GGCCTGGGGTCAG--------------CCCTGGC-TGAGGCCCTGTGCAG-CTGAGGAACTTCTTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700107 76 - 92844088 GGGGCTTGGCT--GGCCCGGGGTCAGGGGAGAAACAGCCACCCTGGC-TGAGGCCCTGGCCAG-CTGAGGATCTTCAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367438 76 + 96509753 GGGGCTTGGCT--GGCCTGGGGTCAGGGGAGAAACAGCCACCCTGGC-TGAGGCCCTGGCCAG-CTGAGGATCTTCAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837253 76 - 16982598 GGGGCTTGGCT--GGCCTGGGGTCAGGGGAGAAACAGCCACCCTGGC-TGAGGCCCTGGCCAG-CTGAGGATCTTCAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640613 76 - 3785965 GGGGCTTGGCT--GGCCTGGGGTCAGGGGAGAAACAGCCACCCTGGC-TGAGGCCCTGGCCAG-CTGAGGATCTTCAGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262321 76 - 90373283 GGGGCTTGGCT--GGCCTGGGGTCAGGGGAGAAACAGCCGCCCTGGC-TGAGGCCCTGGCCAG-CTGAGGATCTTCAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19322 76 - 179258 GGGACTTGGCT--GGCCTGGGGTCAGGGGAGAAACAGCCACCCTGGC-TGAGGCCCTGGCCAG-CTGAGGATCTTCAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512717 76 - 5823884 GGGGCTTGGCT--GGCCTGAGGTCAGGGGAGAAACGGCCACCCTGGC-TGAGACCCTGGCCAG-CTGAGGATCTTCAGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166356 77 + 159171411 GGGGCTTGGCTG-TGCCTGGGGTCAGGAGACAAACAGCCACCCTGGC-TGAGGCCCTGGGCCG-CTGAGGAATGTCAGCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231701 77 + 16356641 GGGGCTTGGCTG-GGCCTGGGGTCAGGAGACAAACACCCACCCTGGC-TGAGGCCCTGGGCAG-CTGAGGAACGTCAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099012 77 + 1231380 GGGGCTTGGCTG-GGCCTGGGGTCAGGAGACAAACAGCCAGCCTGGC-TGAGGCCCTGGGCAG-CTGAGGAACGTTAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628229 39 + 11732439 GGGGCTTGGCTG-GG---------------------------------------CCTGGGCAG-CTGAGGAACGTCAGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56807623 76 + 57149010 GGGGCTCAGCTG-GGCCT-GGGTCAGGAGACAGACAGCCACCCTGGT-GGGGGCGCTGGGCAG-CTGAGGGACTTCGGCC i micMur3.chr18 I 1007 I 60 s proCoq1.NW_012150197v1 1813930 76 - 2029793 GGGGCTCAGCTG-GGCCT-GGGTCGGGAGACAGACGGCCACTCTGGC-TGGGGCACTGGGCAG-CTGAGGGCCTTCGGCC i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22792807 76 + 22939663 GGGGCATAGGTG-GGCCTGGGGTCAGGAGACAATCAGCCACCCTGGA-TGAGGCCCT-GGCTG-CTGAGAGACTTTAGCC i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181752006 72 + 182113224 GGAGCTGGGCT--GGTTGTGGGCTAGGTCAGAGGTA----CTTAAAT-TGAGGTCCCAGGTGG-CAGAGGGGAATCCCTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47563368 77 + 47698779 GGGGCTCAGGGGAGGCCTGTGGTCAGGAGACAAAGAGCTGCCCTGGC-TGAGGCCCTGGGCAG-CTGAGAGGCGTCAGC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 197675 72 - 397369 TGGACGTGGGTT-GGCCTG----CGCGGGAGATGACGCTGCCATGGAGCGAAGCCCGGAGCAGCCCGAGG--CTGCAGC- i dasNov3.JH569290 C 0 C 0 a score=618177.000000 s hg38.chr20_KI270870v1_alt 54923 58 + 183433 AGCTTTGGGCAGCT-CTTGGGTTGGGAGATGGGCTGCTGTTTTCTCGGACAACGCCCTC s panTro5.chr20 66379821 58 + 66533130 AGCTTTGGGCAGCT-CTTGGGTTGGGAGATGGGCTGCTGTTTTCTCGGACAACGCCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060541 58 + 62195757 AGCTTTGGGCAGCT-CTTGGGTTGGGAGATGGGCTGCTGTTTTCTCGGACAACGCCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445913 57 - 578057 AGCTTTGGGCAGCT-CTTGGGTTGGGAGATGGGCTGCTGTTTTCTCGGACAATG-CCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973337 56 - 110113093 AGC-TTGGGCATCT-C-TGGGTTGGGAGATGGGCTGCTGTTTTCTCGGACAACGCCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700183 59 - 92844088 AGCTTTGGGGATCTGCTTGGGTTGGGAGACGGGCTGTTGTTTTCTTGGGCAACGCCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367514 59 + 96509753 AGCTTTGGGGATCTGCTTGGGTTGGGAGATGGGCTGTTGTTTTCTTGGGCAACGCCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837329 59 - 16982598 AGCTTTGGGGATCTGCTTGGGTTGGGAGATGGGCTGTTGTTTTCTTGGGCAACGCCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640689 58 - 3785965 -GCTTTGGGGATCTGCTTGGGTTGGGAGATGGGCTGTTGTTTTCTTGGGCAACGCCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262397 59 - 90373283 AGCTTTGGGGATCTGCTTGGGTTGGGAGATGGGCTGTTGTTTTCTTGGGCAACGCCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19398 59 - 179258 AGCTTTGGGGATCTGCTTGGGTTGGGAGATGGGCTGTTGTTTTCTTGGGCAACGCCCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512793 59 - 5823884 AGCTTTGGGGATCTGCTTGGGTTGGGAGATGGGCTGTTGTTTTCTTGGGCAACGCCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166433 59 + 159171411 CGCTTTGGGTATCTGCTCAGGTTGGGAGATGGGATGTTGTTTTCTTGAATAACACCCTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231778 59 + 16356641 CGCTTTGGGTATCTGCTTGGGTTGGGAGATGGGATGTTGTTTTCTTGAATAACACCCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099089 59 + 1231380 CGCTTTGGGTGTCTGCTCGGGTTGGGAGATGGGATGTTGTTTCCTTGAAGAACACCCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628268 59 + 11732439 CGCTTTGGGTGTCTGCTCGGGTTGGAAGATGGGATGTTGTTTTCTTGAATAACACCCTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1814007 58 - 2029793 TGCCTTGGGTGTCTGCTTGGGTTGGGGGATGGGCTGCT-GCTTCCTGGGCAGAAACCCC i proCoq1.NW_012150197v1 I 1 I 1 s otoGar3.GL873542 22792884 59 + 22939663 TGCCTTGGTTGTCTGCTTGGGTTGGTGGATGGGCTGCTGGCTTCTTGGACAAATATCCA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181752078 49 + 182113224 TGCCTTGGCT-TTTGATTGGGTTGAG-GTTGGGCAACTGAAATCCT--------TCCTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47563445 43 + 47698779 ----------------TTGGGCTGGGGGATGGGCTCCCGACATCTTGGGCGACACACTT i canFam3.chr24 C 0 I 13 s dasNov3.JH569290 197747 41 - 397369 ------------------GCGGTGGGGGCTGGGCGCCTGACTTTTTGGGCCATGGTGGG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56807699 60 + 57149010 I a score=1685708.000000 s hg38.chr20_KI270870v1_alt 54981 92 + 183433 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCTGCTGCAGGCAGA s panTro5.chr20 66379879 92 + 66533130 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCTGCTGCAGGCAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060599 92 + 62195757 CTCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCTGCTGCAGGCAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 445970 92 - 578057 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAAGGAGAATTAGTGGCCAGGCTGCTGCAGGCAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973393 92 - 110113093 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGCGGCCAGGCTGCTGCAGGCAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700242 90 - 92844088 CCCAGCCCCTCAAGA--CTGTTTTCAGTCAGTTCGATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCGGCTGCAGGCAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367573 92 + 96509753 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCGGCTGCAGGCAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837388 92 - 16982598 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCGGCTGCAGGCAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640747 92 - 3785965 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCGGCTGCAGGCAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262456 92 - 90373283 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCGGCTGCAGGCAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19457 92 - 179258 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCGGCTGCAGGCAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512852 92 - 5823884 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCGGCTGCAGGCAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166492 92 + 159171411 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGAAGAGTTAGTGGCCAGGCTGCTGCAGGCAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231837 92 + 16356641 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCTGCTGCAGGCAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099148 92 + 1231380 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAATTAGTGGCCAGGCTGCTGCAGGCAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628327 92 + 11732439 CCCAGCCCCTCAAGACTCTGTTTTCAGTCAGTTCAATTAGTACAACTTTAAAGCAATTAAGGAGAATTAGTGGCCAGGCTGCTGCAGGCAGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56807759 92 + 57149010 CCCAACCCCCCAAGACTCTGTTTTCAATCAGTTCAATTAGTCCAACTTTAAGGCAATTAGGGAGAATTAGTGGCCAGACTGCTGCAGGCAGA i micMur3.chr18 I 60 I 158 s proCoq1.NW_012150197v1 1814066 92 - 2029793 CCCAACCCCCCAAGACTCTGTTTTCAATCAGTTCAATTAGTACAACTTTAAAGCAATTAGGGAGAGTTAGTGGCCAGACTGCTGCGGGCAGA i proCoq1.NW_012150197v1 I 1 I 161 s otoGar3.GL873542 22792943 92 + 22939663 CTCCCCCCCTCAAGACTCTGTTTTCAATCACTTCAATTAGTACAACTTTAAAGTAATTAGGGAGAATTAGCAGCCAGGCTGCTGCAGGCAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181752127 63 + 182113224 -------------------CCTTTCATTCAGTTCAATTTGTATAGTTTTAAAGCAATTAGAGAGGAGTGGTGA----------ACAAGTAGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47563501 89 + 47698779 CCCCTCACCCCCAGACTCTGTTTTCAATCAGTTCAATTAGTACAACTTTAAAGCAATTAGAGAGAATTAGCAGCCAGGCTGCTGCAGGC--- i canFam3.chr24 I 13 C 0 s dasNov3.JH569290 197788 90 - 397369 CCCTCTTCCCCAAGA--CTGTTTTCAATCAGCTCAATTAGGACAACTTTAAAGCAATTAGGGAGAATTAGAGGCTGGGCTGCCGTAGGCTGA i dasNov3.JH569290 C 0 C 0 a score=984205.000000 s hg38.chr20_KI270870v1_alt 55073 98 + 183433 ------TGCTGAATACACTCATG-CCC-----CC-TCCC---CCAACCTCCCTC-----A---------CCG-----------------AACCTGACAGCTGCTGCGGGGAG--------------TGCCTTTCTCTGCTGGCTCTGTCCTTTCTCCCA s panTro5.chr20 66379971 98 + 66533130 ------TGCTGAATACACTCATG-CCC-----CC-TCCC---CCAACCTCCCTC-----A---------CCG-----------------AACCTGACAGCTGCTGCGGGGAG--------------TGCCTTTCTCTGCTGGCTCTGTCCTTTCTCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060691 98 + 62195757 ------TGCTGAATACACTCATG-CCC-----CC-TCCC---CCAACCTCCCTC-----A---------CCG-----------------AACCTGACAGCTGCTGCGGGGAG--------------TGCCTTTCTCTGCTGGCTCTGTCCTTTCTCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446062 107 - 578057 ------TGCTGAATACACTCATG-CCC-----CC-TCCC---CCAACCTCCCTC-----A---------CCG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGG-CCTGCCTTTCTCTGCTGGCTCTGTCCTTTCT-CCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973485 109 - 110113093 ------TGCTGAATACACTCATG-CCT-----CC-TCCC---CCAACCTCCCTC-----G---------CCA-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGGCCCTGCCTTTCTCTGCTGGCTCTGTCCTTTCTCCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700332 108 - 92844088 ------TGCTGAGTACACTCATG--CC-----CC-TCCC---CCAGCGTCCCTC-----C---------CTG-----------------AACCTGACAGCTGCTGTGGGGGGTG---CCTAGGCCCTGCCTTTCTCTGGTGGTGCTGTCCTTTCTTCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367665 109 + 96509753 ------TGCTGAATACACTCATG-CCC-----CC-TCCC---CCAGCGTCCCTC-----C---------CTG-----------------AACCTGACAGCTGCTGTGGGGGGTG---CCTAGGCCCTGCCTTTCTCTGGTGGTGCTGCCCTTTCTTCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837480 109 - 16982598 ------TGCGGAATACAGTCATG-CCC-----CC-TCCC---CCAGCGTCCCTC-----C---------CTG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGGCCCTGCCTTTCTCTGGTGGTGCTGTCCTTTCTTCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640839 109 - 3785965 ------TGCTGAATACACTCATG-CCC-----CC-TCCC---CCAGCGTCCCTC-----C---------CCG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGGCCCTGCCTTTCTCTGGTGGTGCTGTCCTTTCTTCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262548 109 - 90373283 ------TGCTGAATACACTCATG-CCC-----CC-TCCC---CCAACGTCCCTC-----C---------CCG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGGCCCTGCCTTTCTCTGGGGGCGCTGTCCTTTCTTCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19549 109 - 179258 ------TGCTGAATACACTCATG-CCC-----CC-TCCC---CCAGCGTCCCTC-----C---------CCG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGGCCCTGCCTTTCTCTGGTGGTGCTGTCCTTTCTTCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5512944 109 - 5823884 ------TGCTGAATACACTCATG-CCC-----CC-TCCC---CCAACGTCCCTC-----C---------CCG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGGCCCTGCCTTTCTCTGGTGGCGCTGTCCTTTCTTCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166584 108 + 159171411 ------TGCTAAATACACTCCTG-CCC-----CC-TCCC---CCAGC-TCCCTC-----C---------CTG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGGCCCTGCCTTTCTCTGCTGGCTCTGTCCTTTCTCCCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16231929 106 + 16356641 ------TGCTAAAT--ACTCCTG-CCC-----CC-TCCC---CCAGC-TCCCTC-----C---------CTG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGGCCCTGCCTTTCTCTGCTGGCTCTGTCCTTTCTCCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099240 106 + 1231380 ------TGCTAAAT--ACTCCTG-CCC-----CC-TCCC---CCAGC-TCCCTC-----C---------CCG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CACAGGCCCTGCCTTTCTCTGCTGGCTCTGTCCTTTCTCCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628419 108 + 11732439 ------TGCTAAATACACTCCTG-CCC-----CC-TCCC---CCAGC-TCCCTC-----C---------CTG-----------------AACCTGACAGCTGCTGTGGGGAGTG---CCTAGGCCCTGCCTTTCTCTACTGGCTCTGTCCTTTCTCCCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22793035 104 + 22939663 ------CACTGAGTAC-CCCCTG-CCC-----CC-ATTC---CCTTCTTCACCC-----AGGTGAAGTGCCC-----------------ACCCTCCCAGGGGCCTTG----------------CTCTGCCCTCCTCTGTTCACTGGACTATTTCTCCTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181752190 130 + 182113224 ------TGCTACTTACACTCATG-TCC-----CCATCTC---TCCACATCTCTC-----T---------CCTCAGCTGGGTTCCCCTCCATCCTGGAAGGGGCTGCCAGGGATATCCCCCTTATCTATCCTATTTCTACTCACTTTGTTCTCCACCCCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47563590 69 + 47698779 ------------ATGGACTCCTGGCCC-----CC-TCCT---GCCCCATCCCCCTTTGTC---------TCG-----------------AGCCTGGCAGCTGCC-------------CCGA------------------------------TTCTCCTA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 197878 95 - 397369 AGGCTCTGCC-ACCGCCCTCTGG-CCCTTGCTCC-TCCCTGGCCGAGGGCCCCC-----C---------CAC-----------------CGCTTGGCAGCTGC------------------------------CTCTGCCCACTCTGTTCTTTCTCCTA i dasNov3.JH569290 C 0 I 1053 e proCoq1.NW_012150197v1 1814158 161 - 2029793 I e micMur3.chr18 56807851 158 + 57149010 I a score=155935.000000 s hg38.chr20_KI270870v1_alt 55171 20 + 183433 GAGATCCAGCCCCCATCTCT s panTro5.chr20 66380069 20 + 66533130 GAGATCCAGCCCCCGTCTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060789 20 + 62195757 GGGATCCAGCCCCCGTCTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446169 19 - 578057 GAGATCCAG-CCCCGTCTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973594 20 - 110113093 GAGATCCAGCCACCGTGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700440 20 - 92844088 AAGATCCAACCCACATCTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367774 20 + 96509753 AAGATCCAGCCCACATCTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837589 20 - 16982598 AAGATCCAGCCCACATCTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640948 20 - 3785965 AAGATCCAGCCCACATCTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262657 20 - 90373283 AAGATCCAGCCCACATCTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19658 20 - 179258 AAGATCCAGACCACATCTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513053 20 - 5823884 AAGATCCAGCCCACATCTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166692 20 + 159171411 CAGATCCAGCCCACACCTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232035 20 + 16356641 TAGATCCAGCCCACACCTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099346 20 + 1231380 CGGATCCAGCCCATACCTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628527 20 + 11732439 CAGATCCCGCCCACACCTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22793139 15 + 22939663 AAGATCCAGCACAGG----- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181752320 20 + 182113224 CAGGTACTTCCAAGGCCTTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47563659 19 + 47698779 GAGG-ATGGCTCAGGCCTCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814158 161 - 2029793 I e micMur3.chr18 56807851 158 + 57149010 I e dasNov3.JH569290 197973 1053 - 397369 I a score=210086.000000 s hg38.chr20_KI270870v1_alt 55191 15 + 183433 CCTTCTCTCAAGGGT s panTro5.chr20 66380089 15 + 66533130 CCTTCTCTCAAGGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060809 15 + 62195757 CCTTCTCTCAAGGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446188 15 - 578057 CCTTCTCTCAAGGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973614 15 - 110113093 CCTTCTCTCAAGGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700460 15 - 92844088 CCTTCTCTCCAGGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367794 15 + 96509753 CCTTCTCTCCAGGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837609 15 - 16982598 CCTTCTCTCAAGGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640968 15 - 3785965 CCTTCTCTCAAGGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262677 8 - 90373283 CCTTCTC-------T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19678 15 - 179258 CCTTCTCTCAAGGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513073 15 - 5823884 CCTTCTCTCAAGGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166712 15 + 159171411 CATTCCCTCAAAGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232055 15 + 16356641 CCTTCCCTCAAAGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099366 15 + 1231380 CCTTCCCTCAAAGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628547 15 + 11732439 CCTTCCCTCAAAGGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56808009 15 + 57149010 CCTTCCCTCAAGGGC i micMur3.chr18 I 158 C 0 s proCoq1.NW_012150197v1 1814319 13 - 2029793 CCTTCTCTCAAGG-- i proCoq1.NW_012150197v1 I 161 C 0 s otoGar3.GL873542 22793154 15 + 22939663 CCTTCTCTCAAGCGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181752340 15 + 182113224 TCTTCTCTAAGGGGT i mm10.chr2 C 0 I 377 s canFam3.chr24 47563678 15 + 47698779 CCTTCTCTAGAGGGT i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 197973 1053 - 397369 I a score=259128.000000 s hg38.chr20_KI270870v1_alt 55206 17 + 183433 CTGAGGAGGGGAGGGTG s panTro5.chr20 66380104 17 + 66533130 CTGAGGAGGGGAGGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060824 17 + 62195757 CTGAGGAGGGGAGGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446203 17 - 578057 CTGAGGAGGGAGGGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973629 17 - 110113093 CTGAGGAGGGGAGGGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700475 17 - 92844088 CTGAGGAGGGGAGGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367809 17 + 96509753 CTGAGGAGGGGAGGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837624 17 - 16982598 CTGAGGAGGGGAGGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3640983 17 - 3785965 CTGAGGAGGGGAGGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262685 17 - 90373283 CTGAGGAGGGGAGGGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19693 17 - 179258 CTGAGGAGGGGAGGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513088 17 - 5823884 CTGAGGAGGGGAGGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166727 17 + 159171411 CAGAGGAGGGGAGGGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232070 17 + 16356641 CAGAAGAGGGAAGGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099381 17 + 1231380 CAGAGGAGGGGAGGGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628562 17 + 11732439 CAGAGGAGGGGAGTGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56808024 17 + 57149010 CCGAAGAGGGTAGGGTG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1814332 17 - 2029793 CTGAAGAGGGGAGGGTG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22793169 17 + 22939663 CTGAAGAGGGGAGGGCA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47563693 17 + 47698779 CTGCAGAGGGGAGGGCA i canFam3.chr24 C 0 C 0 e mm10.chr2 181752355 377 + 182113224 I e dasNov3.JH569290 197973 1053 - 397369 I a score=639117.000000 s hg38.chr20_KI270870v1_alt 55223 53 + 183433 GGCAGTCTAGGGGACAGACCCAGAGACAGGGGCCCTGGGACTGGGAGGGTGGG s panTro5.chr20 66380121 53 + 66533130 GGCAGTCTAGGGGACAGACCCAGAGACAGGGGCCCTGGGACTGGGAGGGTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060841 53 + 62195757 GGCAGTCTAGGGGACAGACCCAGAGACAGGGGCCCTGGGACTGGGAGGGTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446220 53 - 578057 GGCAGTCTAGGGGACAGACCCAGAGACAGGGGCCCTGGGACTGGGAGGGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973646 53 - 110113093 GGCAGTCCAGGGGACAGACCCAGAGACAGGGGCTCTGGGACTGGGAGGGCGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700492 52 - 92844088 GGCCGTCCAGGGCAGAGACACAGAGAC-GGGGCCCTGGGACTGGGAGGGCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367826 52 + 96509753 GGCCGTCCAGGGCAGAGACACAGAGAC-GGGGCCCTGGGACTGGGAGGGCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837641 53 - 16982598 GGCCGTCCAGGGGAGAGACACAGAGACAGGGGCCCTGGGACGGGGAGGGCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641000 53 - 3785965 GGCCGTCCAGGGGAGAGACACAGAGACAGGGGCCCTGGGACTGGGAGGGCAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262702 53 - 90373283 GGCCGTCCAGGGGAGAGACACAGAGACAGGGGCCCTGGGACTGGGAGGGCAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19710 53 - 179258 GGCCGTCCAGGGGAGAGACACAGAGACAGGGGCCCTGGGACTGGGAGGGCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513105 53 - 5823884 GGCCGTCCAGGGGAGAGACACAGAGACAGGGGCCCTGGGACTGGGAGGGCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166744 53 + 159171411 GGCTGTCCAGGGGAGAGACCCAGAGACAGGGGCCCTGGGACTGGGAAGACAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232087 53 + 16356641 GGCTGTTCAGGGGAGAGACCCAGAGACAGGGGCCCTGGGACTGGGAGGGCGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099398 53 + 1231380 GGCCGTCCAGGGCAGAGACCCAGAGACAGGGGCCCTGGGACTGGGAGGGTGCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628579 53 + 11732439 GGCCGTCCAGGGGAGAGACCCAGAGACAGGGGCCCTGGGACTGGGAGGGCGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56808041 51 + 57149010 GGCAGTCCAGGGGAGAGACT--GAGGCAGGGGCCCTGGGACTGGGAGGGTGGG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1814349 50 - 2029793 GGCAGTCCAGGGGAGAGACT--GAGGCAGGGGCCCT-GGACTGGGAGGGTGGG i proCoq1.NW_012150197v1 C 0 I 6223 s otoGar3.GL873542 22793186 5 + 22939663 AGTAG------------------------------------------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181752732 52 + 182113224 GGCAGTTCAGGAAGGATGCCCAAAGACA-GAGTCCTGAGACTAGGAATGTTGC i mm10.chr2 I 377 C 0 s canFam3.chr24 47563710 40 + 47698779 -----------GGAGACCCCCAGAGACACGGGCGCGGAGACCAGGACTGGG-- i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 197973 1053 - 397369 I a score=12637.000000 s hg38.chr20_KI270870v1_alt 55276 1 + 183433 G s panTro5.chr20 66380174 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060894 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446273 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973699 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700544 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367878 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837694 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641053 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262755 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19763 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513158 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166797 1 + 159171411 G i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232140 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099451 1 + 1231380 G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628632 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56808092 1 + 57149010 G i micMur3.chr18 C 0 I 1010 s mm10.chr2 181752784 1 + 182113224 A i mm10.chr2 C 0 C 0 s canFam3.chr24 47563750 1 + 47698779 A i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e dasNov3.JH569290 197973 1053 - 397369 I e otoGar3.GL873542 22793191 0 + 22939663 C a score=3229935.000000 s hg38.chr20_KI270870v1_alt 55277 360 + 183433 CAGG-CCCGGGGAAATGGGCCAACTTCCCCTCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACTCAGCGCGGATTGGGAGGACTGACCAGGATTGTGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----ACCCTTTGGTGGGGCT-----------GGGGGCTGTTCTTCAGTGGGAGGCCTCTGAGAGGCTGGGCCTCT------CC-------CA-----------------CTAGGTGTGGGGTGGCAGCGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCACACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG s panTro5.chr20 66380175 360 + 66533130 CAGG-CCCGGGGAAATGGGCCAACTTCCCCCCAGGACCCCAGGCCTCGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACTCAGCGCGGATTGGGAGGACTGACCAGGATTGTGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----ACCCTTTGGTGGGGCT-----------GGGGGCTGTTCTTCAGTGGGAGGCCTCTGAGAGGCTGGGCCTCT------CC-------CA-----------------CTAGGTGTGGGGTGGCAGCGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCACACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62060895 360 + 62195757 CAGG-CCCGGGGAAATGGGCCAACTTCCCCCCAGGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACTCAGCGCGGATTGGGAGGACTGACCAGGATTGTGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----ACCCTTTGGTGGGGCT-----------GGGGGCTGTTCTTCAGTGGGAGGCCTCTGAGAGGCTGGGCCTCT------CC-------CA-----------------CTAGGTGTGGGGTGGCAGCGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCACACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446274 359 - 578057 CAGG-CCCGGGGAAATGGGCCAACTTCCCCCCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGATGGTGAGGGTACTCAGCGCGGATTGGGAGGACTGACCAGGATTGTGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----ACCCTTTGGTGGGGCT-----------GGGGGCTGTTCTTCAGT-GGAGGCCTCTGAGAGGCTGGGCCTCT------CC-------CA-----------------CTAGGTGTGGGGTGGCAGCGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCACACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109973700 360 - 110113093 CAGG-CCGGGGGAAATGGGCCAACTTCCCCCCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACCCAGCGCGGATTGGGAGGACTGACCAGGATTGCGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----ACCCTTTGGTGGGGCC-----------GGGGGCTGTTCTTCAGTGGGAGGCCTCTGAGAGGCTGGGCCTCT------CC-------CA-----------------CTAGGTGTGGGATGGCAGCGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGTCACACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92700545 323 - 92844088 CAGGCCCCGAGGAAATGAGCCAACTTCTCCCCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACCCAGCATGGATTGGGAGGACTGACCA-GATTGCAGCCCAGCCTCTG-----------------------GCCCTGTGGCCCCCAGGAGCCG---CC--------------------AGCTCTGG------------TGAG-----GGC----AGCCTTTGGTTGGGCC------------------------------------------------GGCCTCT------GC-------CT-----------------CTAGGTGTGGGGTGGCAGCGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCGTACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96367879 323 + 96509753 CAGGCCCCGAGGAAATGAGCCAACTTCTCCCCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACCCAGCATGGATTGGGAGGACTGACCA-GATTGCAGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----AGCCTTTGGTTGGGCT------------------------------------------------GGCCTCT------GC-------CT-----------------CTAGGTGTGGGGTGGCAGCGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCGTACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16837695 323 - 16982598 CAGGCCCCGAGGAAATGAGCCAACTTCTCCCCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACCCAGCATGGATTGGGAGGACTGACCA-GATTGCAGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----AGCCTTTGGTTGGGCC------------------------------------------------GGCCTCT------GC-------CT-----------------CTAGGTGTGGGGTGGCAGTGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCGTACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCATGGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641054 323 - 3785965 CAGGCCCCGAGGAAATGAGCCAACTTCTCCCCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACCCAGCATGGATTGGGAGGACTGACCA-GATTGCGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----AGCCTTTGGTTGGGCC------------------------------------------------GGCCTCT------GC-------CT-----------------CTAGGTGTGGGGTGGCAGCGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTAGAGCCGCACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90262756 359 - 90373283 CAGGCCCCGGGGAAATGAGCCAACTTCTCCCCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAG-CCCTGAGTGAGGGTGAGGGTACCCAGCATGGATTGGGAGGACTGACCA-GATTGTGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----AGCCTTTGGTTGGGCC-----------GGGAGCTGCTCTTCAGCAGGAGGCCTCTGAGAGCCTGGGCCTCT------CC-------CA-----------------CTAGGTGTGGGGTGGCAGCGAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCGCACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 19764 323 - 179258 CGGGCCCCGAGGAAATGAGCCAACTTCTCCCCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACCCAGCATGGATTGGGAGGATTGACCA-GATTGCGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----GGC----AGCCTTTGGTTGGGCC------------------------------------------------GGCCTCT------GC-------CT-----------------CTAGGTGTGGGGTGGCAGCCAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCGCACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGGCCCCGTGGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513159 360 - 5823884 CAGGCCCCAGGGAAATGGGCCAACTTCTCCCCAAGACCCCAGGCCTGGGCCTGCTCTAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGGCTCAGCCCCTGAGTGAGGGTGAGGGTACCCAGCTTGGATTGGGAGGAATGACCAGGATTGCGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCTGG------------TGAG-----AGC----ACCCTTTGGTTGGGCC-----------GGGAGCTGTTCTTCAGCAGGAGGCCTCTGAGAGCTG-GGCCCCT------CC-------CA-----------------CTAGGTATGGGGTGGCAGCAAGG-------CCCTGC------------T---------------TCT----------------GAGCCAGTGCTGGAGCCGCACCACCTTCTCTGCCTGGTAGTGAAGGAGGTGACCCCGTGGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58166798 362 + 159171411 CAGG-CCCAGGGAAATGGGCCAACTTTCCCCCAAGACCCCA-GCTTGGACCTGCTCCAAGGAG---AG---AAGGGATGGGTGCTGGTTGGAGACTCAG-CCCTGAGTGAGGGTGAGGGTACCCAGTGCGGAAGTAGAGGACTGACCAGTGTAGTGGCCCTGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAACCC---CC--------------------AGCTCCAG------------TGAGGGCCTGGC----ACCCTTTGGTGGATCT-----------GGGAGCTGTTCTTCATGGGGAGGCCTCTGAGAGGCTGGGCCTCT------CC-------CA-----------------CTATGTGTGGGGTGGCAGCGAGG-------CCCTGT------------T---------------TTT----------------GAGCCAG-GCTGGAGCCACACCACCTTCTCTGCCTGGCCGTGAAGGAGGTGGCCCTGCAGGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232141 362 + 16356641 CAGG-CCCAGGAAAATGGGCAAACCTCCCCGCAAGACCCCA-Gcctgggcctgctccaaggag---ag---aagggatgggtgctggttggagactcag-ccctgagtgaGGGTGAGGGTACCAAGCGCGGAAGTAGAGGACTGACCAGTGTAGTGGCCCAGCCTCTG-----------------------GCCCTGTGGCCCGCAGGAGCCC---CC--------------------AGCTCCAG------------TGAGGGCCTGGC----ACCCTTAAGTGGATCT-----------GGGAGCTGTTCTTCAGGGGGAGGCCTCTGAGAGGCTGGGCCTCT------CC-------CG-----------------GTAGGTGTGGGGTGGCAGTGAGG-------CCCTGC------------T---------------TCT----------------GGGCCAG-GCTGGAACCACACCACCGTCTCTGCCTGGCCGTGAAGGAGGTGGCCCTGCAGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099452 361 + 1231380 CAGG-ACCAGGGAAATGGGCCAACTTCCCCCCAAGACCCCA-GCCTGGGCCTGCTCCAAGGAG---AG---AAGGGATGGGTGTTGGTTGGAGACTCAG-CCCTGAGTGAGGGTGAGGGTACCCGGTGCGGAAGTAGAGGACTGACCAGTGTAGCGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTGCAGGAG-CC---CC--------------------AGCTCCAG------------TGAGGGCCTGGC----ACCCTTCAGTGGATCT-----------GGAAGCTGTTCTTCAGGGGGAGGCCTCTGAGAGGCTGGGCCTCT------CC-------CA-----------------CTAGGTGTGGGGTGGCAGTGAGG-------CCCTGC------------T---------------TCT----------------GGGCCAG-GCTGGAGCCACACCACCTTCTCTGCCTGGCCGTGAAGGAGGTGGCCCTGTAGGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2628633 377 + 11732439 CAGG-CCCAGGGAAATGGGCCAGCTTCCCCCCAAGACCTCA-Gcctgggcctgctccaaggag---ag---aagggatgggtgctggttggagactcag-ccctgagtgaGGGTGAGGGTACCCAGCGCGGAAGCAGAGGACTGACCAGTGTAGCGGCCCAGCCTCTG-----------------------GCCCTGTGGCCTCCAGGAGCCC---CC--------------------AGCTCCAG------------TGAGGGCCTGGC----ACCCTTCAGTGGGTCT-----------GGGAGCTATTCTTCA-GGGGAGGCCTTTGAGAGGCTGGGCCTCT------CC-------CACTAGACTCCATGCTGCGCTAGGCGTGGGGTGGCAG-GAGG-------CCCTGC------------T---------------TCT----------------GAGCCAG-GCTGGAGCCACACCACCTTCTCTGCCTGGCCGTGAAGGAGGTGGCCCTGCAGGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22793191 308 + 22939663 -AGGCTCTGGGGAAGT---TCAGCATC-CCCAGAGGCCTCAGACTTGGCCCACCTCTGAGGAGGAAAC---AAAGGATGGGTG--------------------TGGGTCAGAGTGAGGATGTCCCATGCAAATTGGG---------CA----TGTGGAGCAGTCCCAG-----------------------CTCTTGCACCCTCCAGGGGCTC---CC--------------------AGCTCTGG------------CAGA-----GGCCCATACCCCTTGGAGGG----------------------------------------------AGCTGGGCCTCCAGAAGAGC-------CT-----------------CAAGG-GTGGGGTGGCCATAAGATCTGGCCCCCTGCATGTCAAAGACTT---------------TCT----------------GAGCTCGCTCTAGAGATGCTCCATC--CTCTGTCTGG-GGTAGAGGAGGTGACCC-------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181752785 328 + 182113224 -AGGGACCAGGGATGTATGCCAGCTTCCACCTGAGACTTGG-ACTTAGGCCAGATCAGAGGAG---GAGGCAAGGGTTAGATGTTGGTAG-------------TAAGTCCTAGTGAGAGTACCAGGTACAAGTTTGGAGTGCTGAATA-GTGCACAGCCTAACCCTTG-----------------------GTTTTGTGGCCTCTAGGCACCTTGATT--------------------AATCCTAG------------AACA-----CAT----AGCATTGTGAGGACCT-------------------------------GTACTTTTGAG------GATGCCT------GA-------GA-------------------AAGTATGATGAGGC--CCAGT-------CTCTGC------------TGCCCACTCTCAGACCTCT----------------GAGACAGCTCTTGCACTGTATCATCT--CCAGCCTGAGAATG--GGAGATCACACCCTG---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47563751 397 + 47698779 -------CAAGGACATG---------------AAGATC-----CATGGGGTTGCTTTCAGGGA---AGGCAAAGGGA-------------GAGGCTCGACCCCTGAGCCAGGGTGCTGG------GTGCAAATTCACAGCCCTGACCAGGC---CAGCCCCTCCCCTGCGCACCTCCCCTCCCTCCCTCCCACTCACTGACCTCCGCGACCTC---TCTTGCAGGGAGAAGAGGATTAAACCCTTGCCCTCCTGGCGCTGAG-----GGC----GCTGGGTGTTTGTGACTTTTCCTGCTCGACAGCTGCTCCCACGTCTGTGGTTTCAGAGGAGGAAGGGGTGT------GCAGCAGTTCT-----------------CTGGGGAGGGGAGGTGTGCCAGC-------CTCTGC------------C---------------TCCGCTGTGGCCTCCAGGGGATCCGG-CCTGGGACCCCTGCACCC-CTTGGCCTCA----GAAGGAAGCTGCTGCATGGG-G i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 197973 1053 - 397369 I a score=1322495.000000 s hg38.chr20_KI270870v1_alt 55637 119 + 183433 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------GGCTGCTCTG-----TGGGGAGAGCTCCAGGT-----GCTTG-------CT----------TGCGTGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC s panTro5.chr20 66380535 119 + 66533130 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------GGCTGCTCTG-----TGGGGAGAGCTCCAGGT-----GCTTG-------CT----------TGCGTGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061255 119 + 62195757 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------GGCTGCTCTG-----TGGGGAGAGCTCCAGGT-----GCTTG-------CT----------TGCGTGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446633 119 - 578057 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------GGCTGCTCTG-----TGGGGAGAGCTCCAGGT-----GCTTG-------CT----------TGCGTGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TTGCAGATGGAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974060 119 - 110113093 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GGGCCCCATG------------------------GGCTGCTCTG-----CGGGGAGAAATCCAGGT-----GCTTG-------CT----------TGCGTGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC i nomLeu3.chr13 C 0 M 270 s rheMac8.chr10 92700868 119 - 92844088 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------TTCTGCTCTG-----CGGGGAGAGCTCCAGGT-----GCTTG-------CT----------TGCATGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368202 119 + 96509753 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GGGCCCCTTG------------------------TTCTGCTCTG-----CGGGGAGAGCTCCAGGT-----GCTTG-------CT----------TGCATGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838018 119 - 16982598 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------TTCTGCTCTG-----CGGGGAGAGCTCCAGGT-----GCTTG-------CT----------TGCATGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641377 119 - 3785965 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------TTCTGCTCTG-----CGGGGAGAGCTCCAGGT-----GCTTG-------CT----------TGCATGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263115 119 - 90373283 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------TTCTGCTCCG-----CGGGGAGCGCTCCAGGT-----GCTTG-------CT----------CGCATGGTTGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCACAGATGGAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20087 119 - 179258 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------TTCTGCTCTG-----CGGGGAGAGCTCCAGGT-----GCTTG-------CT----------TGCGTGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513519 119 - 5823884 CTGCAGACCCTGGGCCCT---------------------------------CC--CTG---------GTGCCCCTTG------------------------GGCTGCTCTG-----CGGGGAGAGCTCCAGGT-----GCTTG-------CT----------CGCATGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TCGCAGATGGAGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167160 119 + 159171411 CTGCAGACCCTGAGCCCT---------------------------------CC--CTG---------AGTGCTCCTG------------------------GGCTGCTCTG-----TGGGGAGAGCCCCAGGC-----GCTTG-------CT----------TGCATGGATGGGGCACC---AGGG-CAGGTTCAGGACTGACT---TTGCAGATGGAACC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232503 119 + 16356641 CTGCAGACCCTGAGCCCT---------------------------------CC--CTG---------AGTGCTCCTG------------------------GGCTGCTCTG-----TGGGGAGAGCCCCAGGC-----GCTTG-------CT----------TGCATGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TTGCAGATGGAGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099813 119 + 1231380 CTGCAGACCCTGAGCCCT---------------------------------CC--CTG---------AGTGCTCCTG------------------------GGCTCTTCTG-----TGGGGAGAGCCCCAGGC-----ACTTG-------CT----------CGCATGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACC---TTGCAGATGGAGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629010 119 + 11732439 CTACAGACCCTGCGCCCT---------------------------------CC--CTG---------AGTGCTCCTG------------------------GGCTGCTCTG-----TGGGGAGAGCCCCAGGG-----ACTTG-------CT----------TGCATGGATGGGGCACC---AGGG-CAGGTGCAGGGCTGACT---TTGCAGATGGAGCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22793499 71 + 22939663 ---------------------------------------------------CC--TTG---------GTGCCCCTGG------------------------GGCTGTTTTG-----TGG----------------------------------------------------GAGGCTCC---AGGGTTAGGTGGAGG-CTGACT---CTGCAGATGGAACC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181753113 110 + 182113224 -----GCCCCTGGGTCCC---------------------------------TCCACGA---------GTGCCCCTTA------------------------GGTTGTTCTG-----TAGGAAAGGTTTCTGGT-----AGTTT-------CT----------TACATAGGTG-----CA---AGGG-CAGGTACACTGCTGATT---CTGCAAA-GAAGCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47564148 204 + 47698779 CTCTGGCCCCTGCGCTCTGCACAGCAGGAGAGCGGGTGCCCAGGCCTGCTACC--CTGTGCCGGCCAGGGCCCTCTGAGCCAGCCCCAGAGCGCGGGAGGTGGCTCCCCTG-----GGCTGAGAGCTCCTGGTCCGAGGCCTGGGCCCCTCTTCCAGGAGGATGCTTGGGGGGGGC------AGGC-CAGGTGCAGGCCTGACT---TTGCAGACAGAACC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 199026 115 - 397369 CTGCAGGGCCTGGGC------------------------------------CC--CTG---------G-----CCAG------------------------TGCTGCTCGGCCGCCTGGGGG-------AGGC-----GCCGG-------GC----------CACGTGGACGGAGGACACGGGGGG-CAGGTGCAGCGCCGGCTGACTTGGAGACAGAGCC i dasNov3.JH569290 I 1053 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56808093 1010 + 57149010 I a score=540201.000000 s hg38.chr20_KI270870v1_alt 55756 45 + 183433 CTTTGTGCGGGG--------------------ACCCTGTCTTCCGGCCTTGCCCCTCCCTACTCC s panTro5.chr20 66380654 45 + 66533130 CTTTGTGCGGGG--------------------ACCCTGTCTTCCGGCCTTGCCCCTCCCTACTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061374 45 + 62195757 CTTTGTGCGGGG--------------------ACCCTGTCTTCCGGCCTTGCCCCTCCCTACTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446752 44 - 578057 CTTTGTGCGGGG--------------------ACCCTGTCTTCCGGCCTTGCCCCTCCCTACT-C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92700987 45 - 92844088 CTTTGTGCGGGG--------------------ACCCCGTCTTCCGGCCTTGCCCCTCCCTACTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368321 45 + 96509753 CTTTGTGCGGGG--------------------ACCCCGTCTTCCGGCCTTGCCCCTCCCTACTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838137 45 - 16982598 CTTTGTGCGGGG--------------------ACCCCGTCTTCCGGCCTTGCCCCTCCCTACTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641496 45 - 3785965 CTTTGTGCGGGG--------------------ACCCCGTCTTCCGGCCTTGCCCCTCCCTACTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263234 45 - 90373283 CTTTGTGCGGGG--------------------ACCCCGTCTTCCGGCCTTGCCCCTCCCTACTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20206 45 - 179258 CTTTGTGCGGGG--------------------ACCCCGTCTTCCGGCCTTGCCCCTCCCTACTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513638 45 - 5823884 CTTTGTGCGGGG--------------------ACCCCGTCTTCCGGCCTTGCCCCTCCCTACTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167279 45 + 159171411 CTTTGTGCAGGG--------------------ACCCCGCCTTCTGGCCTTGCTCCTCCCCACTCC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232622 45 + 16356641 CTTTGTGCAGGG--------------------ACTCCGCCTTCCGGCCTTGCCCCTCCCTACTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099932 45 + 1231380 CTTTGTGCAAGG--------------------ACTCCGCCGTCCGGCCCGGCCCCTCCCTACTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629129 45 + 11732439 CTTTGTGCAGGG--------------------ACCTCGCCTTCCGGCCTTGCCCCTCCCTACTCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22793570 42 + 22939663 TTTTGTGTGGGG--------------------ACCC--TCTTTCAGCTGTGTCGCTTCCCACTC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181753223 43 + 182113224 CTTTGTG-AGGG--------------------ACTTTGTCTTCTGAA-TGGCCTCTCTTCACTTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47564352 44 + 47698779 CTTTGTACTGGG--------------------ACCC-GCCTTCCGGCCCTGCCCCTCCCCACTCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 199141 64 - 397369 CTTTGTGTGGGGCTGCTAGGGGcctcccccctcccccgtcttccggccctgcccctccc-gctcc i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56808093 1010 + 57149010 I e nomLeu3.chr13 109974179 270 - 110113093 M a score=1090201.000000 s hg38.chr20_KI270870v1_alt 55801 82 + 183433 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCCACCAGC--CGCAGCCTCCCTCAGATGTGTGGGG s panTro5.chr20 66380699 82 + 66533130 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCCGTGATGCCCCCACCAGC--CGCAGCCTCCCTCAGATGTGTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061419 82 + 62195757 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCCGTGATGCCCCCACCAGC--CGCAGCCTCCCTCAGATGTGTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446796 82 - 578057 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCCACCAGC--CGCAGCCTCCCTCAGATGTGTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974449 81 - 110113093 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCCACCGGC--CGCAGCCTCCCTCAGATGTGT-GGG i nomLeu3.chr13 M 270 C 0 s rheMac8.chr10 92701032 82 - 92844088 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCAACCAGC--CGCAGCCTCCCTTAGATGTGTGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368366 82 + 96509753 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCAACCAGC--CGCAGCCTCCCTTAGATGTGTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838182 82 - 16982598 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCAACCAGC--CGCAGCCTCCCTTAGATGTGTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641541 82 - 3785965 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCAACCAGC--CGCAGCCTCCCTTAGATGTGTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263279 82 - 90373283 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCAACCAGC--CGCAGCCTCCCTTAGATGTGTGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20251 82 - 179258 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCAACCAGC--CGCAGCCTCCCTTAGATGTGTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513683 81 - 5823884 CCCAGCTTCTCAAAGAAGGTCTGTTTTCTGAGCCTCCTCTGTGATGCCCCAACCAGC--CGCAGCCTCCCTTAGATGTGC-GGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167324 82 + 159171411 CCTAGCTTCTCAAAGGAGGCCTGTTTTCTGAGCTTCCTTTCTGACGCCCGCACCCGC--TGCAGCCTCCCTCAGATGTGTCGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232667 82 + 16356641 CCCAGCTTCTCAAAGGAGGCCTGTTTTATGAGCCTCCTCTCTGACGCCCCCACCTGC--CGCAGCCTCCCTCAGATGTGTGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1099977 82 + 1231380 CCCAGCTTCTCAAAGGAGGCCTGTTTTCTGAGCCTCCTCTCTGACGCCCCCACCTGC--CGCAGCCTCCCTCAGATGTGTGGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629174 82 + 11732439 CCCAGCTTCTCAAAGGAGGCCTGTTTTCTGAGCCTCCTCTCTGATGCCCCTACCCGC--CGCAGCCTCCCTCAGATGTGTGGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22793612 69 + 22939663 CCTAGCCTCTCAAAGAAGGCCTGCTTTCAGAGCCTCCTCTGTGACATCCTCAGCAGC--AGCAGCATCCCT------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181753266 79 + 182113224 CCTAGACTTTCAAAGA---TCTGTTTCCTGCGTCTCTTTGGAGACACTCTCATCGCA--TGGCGTCTTCTTCATTTATGAAGAG i mm10.chr2 C 0 I 1727 s canFam3.chr24 47564396 84 + 47698779 CCCAGCCTCTCAAAGAAGGCCTGTTCTCTGAGCCCCCTCTGGGAGACCCCCCTCCCCAGCGCAGCCTCCCTGAGACGTGTGTGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 199205 76 - 397369 cccagcctctcAAAGAGCTCCTGTTCTCTGGGCCTCTTCTGGGAGACCCCCGCTGGC--CGCGGCCTCCCTCAGATGT------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56808093 1010 + 57149010 I a score=262203.000000 s hg38.chr20_KI270870v1_alt 55883 25 + 183433 GGTGTCCGCGGTCCTAACCAATGTC s panTro5.chr20 66380781 25 + 66533130 GGTGTCCGCAGTCCTAACCAACGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061501 25 + 62195757 GGTGTCCGCAGTCCTAACCAACGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446878 25 - 578057 GGTGTCCGCAGTCCTAACCAACGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974530 25 - 110113093 GGTGTCCGCAGTCCTAACCAACGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701114 25 - 92844088 GGTGTCCGCAGTCCTAACCAATGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368448 25 + 96509753 GGTGTCCGCAGTCCTAACCAATGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838264 25 - 16982598 GGTGTCCGCAGTCCTAACCAATGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641623 25 - 3785965 GGTGTCCGCAGTCCTAACCAATGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263361 25 - 90373283 GGTGTCTGCAGTCCTAACCAATGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20333 25 - 179258 GGTGTCCGCAGTCCTAACCAATGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513764 25 - 5823884 GGTGTCCGCAGTCCTAACCAGTGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167406 25 + 159171411 GGTGTCTGCAGACCTAACCAGTGTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232749 25 + 16356641 GGTGTCTGCAGTCCTAACCAGTGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100059 25 + 1231380 GGTGTCTGCGGTCCTAAGCAGTGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629256 25 + 11732439 GGTGTCTGCAGTCCTAACCAGTGTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22793681 14 + 22939663 ----------GACCCCACC-TTGTC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47564480 16 + 47698779 GCCCCGCACGGCCC---------TC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 199281 18 - 397369 -------GCAGTCCCACCCAGCGTC i dasNov3.JH569290 C 0 I 373 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I a score=350508.000000 s hg38.chr20_KI270870v1_alt 55908 36 + 183433 TTTTCTGCATGTGTCCACGTGTATCTGGCACTTTCT s panTro5.chr20 66380806 36 + 66533130 TTTTCTGCATGTGTCCacatgtatctggcactttct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061526 36 + 62195757 TTTTCTGCATGTGTCCACATGTATCTGGCACTTTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446903 36 - 578057 TTTTCTGCATGTGTCCACATGTATCTGGCACTTTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974555 36 - 110113093 TTTTCTGCATGTGTCCACAAGTATGTGGCACTTTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701139 36 - 92844088 TTTTCTGCATGTGTCCACATGTATCTAGCACTTTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368473 36 + 96509753 TTTTCTGCATGTGTCCACATGTATCTAGCACTTTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838289 36 - 16982598 TTTTCTGCATGTGTCCACATGCATCTAGCACTTTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641648 36 - 3785965 TTTTCTGCATGTGTCCACATGTATCTAGCACTTTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263386 36 - 90373283 TTTTCTGCATGTGTCCACATGTATCTGGCACTTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20358 36 - 179258 TTTTCTGCATGTGTCCACATGTATCCAGCACTTTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513789 36 - 5823884 TTTTCTGCATGTGTCCACATGTATCTGGCACTTTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167431 30 + 159171411 TTTTCTGCATGTGTCCACATGTAT------CTTTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232774 30 + 16356641 TTTTCTGCATGTGTCCACATGTAT------CTTTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100084 30 + 1231380 TTTTCTGCATGTGTCCACATGTAT------GTTTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629281 30 + 11732439 TTTTCTGCATGTGTCCACATGTAT------CTTTCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22793695 36 + 22939663 CTTTCTGCACTTGCCTACATATATCTGGCACTTTCT i otoGar3.GL873542 C 0 I 1043 s canFam3.chr24 47564496 12 + 47698779 CTTTC-------ACCCACG----------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I a score=812033.000000 s hg38.chr20_KI270870v1_alt 55944 80 + 183433 CTGAGCAGGCTCTGGGCTCAGCACCGGGTAAGGCAGATCCATGCAGCCCCTCA-----CCTTG----GCCG-AACACTGAACAGATGATG s panTro5.chr20 66380842 80 + 66533130 ctgtgcaggccctgggctcagcactgggtaaggcagatccatgcagcccctca-----ccttg----gccg-aacactgaacagatgatg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061562 80 + 62195757 CTGAGCAGGCCCTGGGCTCAGCACGGGGTAAGGCAGATCCATGCAGCCCCTCA-----CCTTG----GCCG-AACACTGAACAGATGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 446939 79 - 578057 CTGAGCAGGCCCTGGGCTCAGCACCGGGTAAGGCAGATCCATGCAGCCCCTCA-----CCTTG----GCCG-AACACTGAACAGATGAT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974591 80 - 110113093 CTGAGCAGGCCCTGGGCTCAGCACCGGGTAAGGCAGATCCATGCAGCCCTTCA-----CCTTG----GCCT-AACACTGAGCAGATGATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701175 80 - 92844088 CTGAGCAGCCCGTGGGCTCAGCACCAGGTAAGGCTGACCCATGCAGCCCCTCA-----CCTAG----GCCT-AACACTGAACAGATGATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368509 80 + 96509753 CTGAGCAGCCCGTGGGCTCAGCACCAGGTAAGGCTGACCCATGCAGCCCCTCA-----CCTAG----GCCT-AACACTGAACAGATGATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838325 80 - 16982598 CTGAGCAGCCCGTGGGCTCAGCACCAGGTAAGGCTGACCCATGCAGCCCCTCA-----CCTAG----GCCT-AACACTGAACAGATGATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641684 80 - 3785965 CTGAGCAGCCCGTGGGCTCAGCACCAGGTAAGGCTGACCCATGCAGCCCCTCA-----CCTAG----GCCT-AACACTGAACAGATGATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263422 80 - 90373283 CTGAGCAGCCCGTGGGCTCAGCACCAGGTAACCCTAACCCATGCAGCCCCTCA-----CCTAG----GCCT-AACACTGAACAGATGATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20394 80 - 179258 CTGAGCAGCCCGTGGGCTCAGCACCAGGTAAGGCTGACCCATGCAGCCCCTCA-----CCTAG----GCCT-AACACTGAACAGATGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513825 80 - 5823884 CTGAGCAGCCCGTGGGCTCAGCACCAGGTAAGGCTGACCCATGCAGCCCCTCA-----CCTAG----GCCT-AACACTGAACAGATGATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167461 79 + 159171411 CCAAGCACGCCCTGGGCTCAGCCCAGGGTAGGGCAGACCCATGCA-TCCCTCA-----CCTTG----GCCT-AGCACTAAACAGATGATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232804 79 + 16356641 CCAAGCAGGCCCTGGGTTCAGCCCAGGGTAGGGCAGACCCATGCA-TCCCTCA-----CCTTG----GCCT-AGCACCAAACAGATGATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100114 79 + 1231380 CCAGGCAGGCCCTGGGCTCAGCCCAGGGTAGGGCAGACCCGTGCA-TCCCTCA-----CCTTG----GCCT-AGCACTAAACAGATGATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629311 80 + 11732439 CCAAGCAGGCCCTGGGCTCAGCCCGGGGTAGGGCAGACCCATGCA-TCCCTCA-----CCTTG----GCCTGAGCTCTAAACAGATGATG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22794774 80 + 22939663 CTAAGCAGGCCCTGATCTAGGTGTGTGGTAGGGCAGCTCCATGTAGCCCCTTG-----CCTTT----GCCT-GATGCTGGACAGATGATG i otoGar3.GL873542 I 1043 C 0 s canFam3.chr24 47564508 88 + 47698779 -TGAGCAGGCCCGGAGCTGGGCGCTGGGTGAGGCAGACGCACATCGTCCCTCGGCCTCCCTCGAGGAGTTG-GACGCTGGACAAATGATG i canFam3.chr24 C 0 I 608 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I a score=109776.000000 s hg38.chr20_KI270870v1_alt 56024 12 + 183433 AC--ATGTACTTGT s panTro5.chr20 66380922 12 + 66533130 ac--atgtacttgt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061642 12 + 62195757 AC--ATGTACTTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447018 10 - 578057 ----ATGTACTTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974671 12 - 110113093 AC--ATGCACTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701255 12 - 92844088 AC--ATGTACTTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368589 12 + 96509753 AC--ATGTACTTGT i macFas5.chr10 C 0 T 3 s macNem1.NW_012014244v1 16838405 12 - 16982598 AC--ATGTACTTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641764 12 - 3785965 AC--ATGTACTTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263502 12 - 90373283 AC--ATGTACTTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20474 12 - 179258 AC--ATGTACTTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513905 12 - 5823884 AC--ATGTACTTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167540 12 + 159171411 AC--GCCTACTTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232883 12 + 16356641 GC--ATGCACGTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100193 12 + 1231380 AC--ACGTGCTTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629391 12 + 11732439 AC--ACGCACTTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22794854 14 + 22939663 ATGGACCTGCCTGT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I a score=6713.000000 s hg38.chr20_KI270870v1_alt 56036 3 + 183433 GCA s gorGor5.CYUI01015848v1 447028 3 - 578057 GCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974683 3 - 110113093 GCA i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012114444v1 5513917 3 - 5823884 GCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167552 3 + 159171411 GCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232895 3 + 16356641 GCA i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2629403 3 + 11732439 GCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22794868 3 + 22939663 GCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e cerAty1.NW_012001373v1 3641776 0 - 3785965 C e chlSab2.chr2 90263514 0 - 90373283 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e panPan2.chr20 62061654 0 + 62195757 C e manLeu1.NW_012101652v1 20486 0 - 179258 C e macNem1.NW_012014244v1 16838417 0 - 16982598 C e cebCap1.NW_016107870v1 1100205 0 + 1231380 C e panTro5.chr20 66380934 0 + 66533130 C e rheMac8.chr10 92701267 0 - 92844088 C e macFas5.chr10 96368601 3 + 96509753 T a score=51600.000000 s hg38.chr20_KI270870v1_alt 56039 34 + 183433 ATTCCAGCTTCAACAAGGGTCACCAGAACAGCTC s gorGor5.CYUI01015848v1 447031 34 - 578057 ATTCCAGCTTCAACAAGGGTCACCAGAACAGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974686 34 - 110113093 ATTCCAGCTTCAACAAGGGTTGCCAGAACAGCTC i nomLeu3.chr13 C 0 C 0 s calJac3.chr5 58167555 34 + 159171411 ATTCCAGCTCCAACAAGGGTCCCCTGAATAGCTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232898 34 + 16356641 ATTCAAGCTTCAACAAGGGTCACCTGAATAGCTC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2629406 34 + 11732439 ATTCCAGCTTCAACAAGGGTCACCTGAATAGCTC i aotNan1.NW_018500483v1 C 0 I 35 s otoGar3.GL873542 22794871 34 + 22939663 ATTCCAGTTGGGACAAGAGACACCAGAAGAGTTC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e cerAty1.NW_012001373v1 3641776 0 - 3785965 C e colAng1.NW_012114444v1 5513920 0 - 5823884 C e chlSab2.chr2 90263514 0 - 90373283 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e panPan2.chr20 62061654 0 + 62195757 C e manLeu1.NW_012101652v1 20486 0 - 179258 C e macNem1.NW_012014244v1 16838417 0 - 16982598 C e cebCap1.NW_016107870v1 1100205 0 + 1231380 C e panTro5.chr20 66380934 0 + 66533130 C e rheMac8.chr10 92701267 0 - 92844088 C e macFas5.chr10 96368601 3 + 96509753 T a score=474.000000 s hg38.chr20_KI270870v1_alt 56073 1 + 183433 T s gorGor5.CYUI01015848v1 447065 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974720 1 - 110113093 T i nomLeu3.chr13 C 0 T 40 s macFas5.chr10 96368598 1 + 96509753 T i macFas5.chr10 T 3 C 0 s calJac3.chr5 58167589 1 + 159171411 C i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232932 1 + 16356641 C i saiBol1.JH378156 C 0 T 41 s otoGar3.GL873542 22794905 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e cerAty1.NW_012001373v1 3641776 0 - 3785965 C e colAng1.NW_012114444v1 5513920 0 - 5823884 C e chlSab2.chr2 90263514 0 - 90373283 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e panPan2.chr20 62061654 0 + 62195757 C e manLeu1.NW_012101652v1 20486 0 - 179258 C e macNem1.NW_012014244v1 16838417 0 - 16982598 C e cebCap1.NW_016107870v1 1100205 0 + 1231380 C e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e panTro5.chr20 66380934 0 + 66533130 C e rheMac8.chr10 92701267 0 - 92844088 C a score=1102.000000 s hg38.chr20_KI270870v1_alt 56074 3 + 183433 GAG s gorGor5.CYUI01015848v1 447066 3 - 578057 GAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974681 3 - 110113093 GTG i nomLeu3.chr13 T 40 C 0 s macFas5.chr10 96368599 3 + 96509753 GTG i macFas5.chr10 C 0 C 0 s otoGar3.GL873542 22794906 3 + 22939663 AAG i otoGar3.GL873542 C 0 I 2 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e cerAty1.NW_012001373v1 3641776 0 - 3785965 C e colAng1.NW_012114444v1 5513920 0 - 5823884 C e chlSab2.chr2 90263514 0 - 90373283 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e panPan2.chr20 62061654 0 + 62195757 C e manLeu1.NW_012101652v1 20486 0 - 179258 C e saiBol1.JH378156 16232933 41 + 16356641 T e macNem1.NW_012014244v1 16838417 0 - 16982598 C e cebCap1.NW_016107870v1 1100205 0 + 1231380 C e calJac3.chr5 58167590 0 + 159171411 C e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e panTro5.chr20 66380934 0 + 66533130 C e rheMac8.chr10 92701267 0 - 92844088 C a score=18593.000000 s hg38.chr20_KI270870v1_alt 56077 36 + 183433 CAATTCCAGCTTCAACAAGGGTCACCAGAATTGCTC s gorGor5.CYUI01015848v1 447069 36 - 578057 CAATTCCAGCTTCAACAAGGGTCACCAGAATTGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974684 36 - 110113093 CAATTCCAGCTTCAACAAGGGTTGCCAGAACAGCTC i nomLeu3.chr13 C 0 T 40 s macFas5.chr10 96368602 36 + 96509753 CAATTCCAGCTTCAACAAGGGTCACCAGAATAGCTC i macFas5.chr10 C 0 T 40 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e cerAty1.NW_012001373v1 3641776 0 - 3785965 C e colAng1.NW_012114444v1 5513920 0 - 5823884 C e chlSab2.chr2 90263514 0 - 90373283 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e panPan2.chr20 62061654 0 + 62195757 C e manLeu1.NW_012101652v1 20486 0 - 179258 C e saiBol1.JH378156 16232933 41 + 16356641 T e macNem1.NW_012014244v1 16838417 0 - 16982598 C e cebCap1.NW_016107870v1 1100205 0 + 1231380 C e calJac3.chr5 58167590 0 + 159171411 C e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e panTro5.chr20 66380934 0 + 66533130 C e rheMac8.chr10 92701267 0 - 92844088 C e otoGar3.GL873542 22794909 2 + 22939663 I a score=7737.000000 s hg38.chr20_KI270870v1_alt 56113 9 + 183433 TGTGCAATC s gorGor5.CYUI01015848v1 447105 9 - 578057 TGTGCAATC i gorGor5.CYUI01015848v1 C 0 T 80 s nomLeu3.chr13 109974680 9 - 110113093 TGTGCAATT i nomLeu3.chr13 T 40 C 0 s macFas5.chr10 96368598 9 + 96509753 TGTGCAATT i macFas5.chr10 T 40 C 0 s saiBol1.JH378156 16232892 9 + 16356641 TGTGCAATT i saiBol1.JH378156 T 41 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e cerAty1.NW_012001373v1 3641776 0 - 3785965 C e colAng1.NW_012114444v1 5513920 0 - 5823884 C e chlSab2.chr2 90263514 0 - 90373283 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e panPan2.chr20 62061654 0 + 62195757 C e manLeu1.NW_012101652v1 20486 0 - 179258 C e macNem1.NW_012014244v1 16838417 0 - 16982598 C e cebCap1.NW_016107870v1 1100205 0 + 1231380 C e calJac3.chr5 58167590 0 + 159171411 C e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e panTro5.chr20 66380934 0 + 66533130 C e rheMac8.chr10 92701267 0 - 92844088 C e otoGar3.GL873542 22794909 2 + 22939663 I a score=27304.000000 s hg38.chr20_KI270870v1_alt 56122 34 + 183433 CCAGCTTCAACAAGGGTCACCAGAACAGCTCTGA s gorGor5.CYUI01015848v1 447034 34 - 578057 CCAGCTTCAACAAGGGTCACCAGAACAGCTCTGA i gorGor5.CYUI01015848v1 T 80 C 0 s nomLeu3.chr13 109974689 34 - 110113093 CCAGCTTCAACAAGGGTTGCCAGAACAGCTCTGA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96368607 34 + 96509753 CCAGCTTCAACAAGGGTCACCAGAATAGCTCAGA i macFas5.chr10 C 0 T 40 s saiBol1.JH378156 16232901 34 + 16356641 CAAGCTTCAACAAGGGTCACCTGAATAGCTCCAA i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e cerAty1.NW_012001373v1 3641776 0 - 3785965 C e colAng1.NW_012114444v1 5513920 0 - 5823884 C e chlSab2.chr2 90263514 0 - 90373283 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e panPan2.chr20 62061654 0 + 62195757 C e manLeu1.NW_012101652v1 20486 0 - 179258 C e macNem1.NW_012014244v1 16838417 0 - 16982598 C e cebCap1.NW_016107870v1 1100205 0 + 1231380 C e calJac3.chr5 58167590 0 + 159171411 C e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e panTro5.chr20 66380934 0 + 66533130 C e rheMac8.chr10 92701267 0 - 92844088 C e otoGar3.GL873542 22794909 2 + 22939663 I a score=7800.000000 s hg38.chr20_KI270870v1_alt 56156 1 + 183433 G s panTro5.chr20 66380934 1 + 66533130 g i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061654 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447068 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974723 1 - 110113093 G i nomLeu3.chr13 C 0 T 3 s rheMac8.chr10 92701267 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368601 1 + 96509753 G i macFas5.chr10 T 40 C 0 s macNem1.NW_012014244v1 16838417 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641776 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263514 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20486 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s saiBol1.JH378156 16232935 1 + 16356641 G i saiBol1.JH378156 C 0 T 3 s cebCap1.NW_016107870v1 1100205 1 + 1231380 G i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e colAng1.NW_012114444v1 5513920 0 - 5823884 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e calJac3.chr5 58167590 0 + 159171411 C e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e otoGar3.GL873542 22794909 2 + 22939663 I a score=10505.000000 s hg38.chr20_KI270870v1_alt 56157 2 + 183433 CA s panTro5.chr20 66380935 2 + 66533130 ca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061655 2 + 62195757 CA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447069 2 - 578057 CA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92701268 2 - 92844088 CA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368602 2 + 96509753 CA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838418 2 - 16982598 CA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641777 2 - 3785965 CA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263515 2 - 90373283 CA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20487 2 - 179258 CA i manLeu1.NW_012101652v1 C 0 C 0 s cebCap1.NW_016107870v1 1100206 2 + 1231380 CA i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e colAng1.NW_012114444v1 5513920 0 - 5823884 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e saiBol1.JH378156 16232936 3 + 16356641 T e calJac3.chr5 58167590 0 + 159171411 C e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e nomLeu3.chr13 109974724 3 - 110113093 T e otoGar3.GL873542 22794909 2 + 22939663 I a score=16676.000000 s hg38.chr20_KI270870v1_alt 56159 3 + 183433 ATT s panTro5.chr20 66380937 3 + 66533130 att i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061657 3 + 62195757 ATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447071 3 - 578057 ATT i gorGor5.CYUI01015848v1 C 0 I 40 s rheMac8.chr10 92701270 3 - 92844088 ATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368604 3 + 96509753 ATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838420 3 - 16982598 ATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641779 3 - 3785965 ATT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263517 3 - 90373283 ATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20489 3 - 179258 ATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513920 3 - 5823884 ATT i colAng1.NW_012114444v1 C 0 C 0 s cebCap1.NW_016107870v1 1100208 3 + 1231380 ATT i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e saiBol1.JH378156 16232936 3 + 16356641 T e calJac3.chr5 58167590 0 + 159171411 C e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e nomLeu3.chr13 109974724 3 - 110113093 T e otoGar3.GL873542 22794909 2 + 22939663 I a score=171209.000000 s hg38.chr20_KI270870v1_alt 56162 32 + 183433 CCAGCTTCAACAAGGGTCACCAGAACAGCTCG s panTro5.chr20 66380940 32 + 66533130 ccagcttcaacaaggggcaccagaacagctcg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061660 32 + 62195757 CCAGCTTCAACAAGGGGCACCAGAACAGCTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447114 32 - 578057 CCAGCTTCAAGAAGCGTCACCAGAACAGCTTG i gorGor5.CYUI01015848v1 I 40 C 0 s rheMac8.chr10 92701273 32 - 92844088 CCAGCTTCAACAAGGGTCACCAGAATAGCTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368607 32 + 96509753 CCAGCTTCAACAAGGGTCACCAGAATAGCTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838423 32 - 16982598 CCAGCTTCAACAAGGGTCACCAGAATAGCTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641782 32 - 3785965 CCAGCTTCAACAAGGGTCACCAGAATAGCTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263520 32 - 90373283 CCAGCTTCAACAAAGGTTACTAGAATAGCTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20492 32 - 179258 CCAGCTTCAACAAGGGTCAGCAGAATAGCTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513923 32 - 5823884 CCAGCTTCAACAAGGGTCACCAGAATAGCCCA i colAng1.NW_012114444v1 C 0 C 0 s cebCap1.NW_016107870v1 1100211 32 + 1231380 CCAGCTTCAACAAGGGTCACCTGAATAGCTCC i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e saiBol1.JH378156 16232936 3 + 16356641 T e calJac3.chr5 58167590 0 + 159171411 C e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e nomLeu3.chr13 109974724 3 - 110113093 T e otoGar3.GL873542 22794909 2 + 22939663 I a score=52006.000000 s hg38.chr20_KI270870v1_alt 56194 6 + 183433 GAGAAG s panTro5.chr20 66380972 6 + 66533130 gagaag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061692 6 + 62195757 GAGAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447146 6 - 578057 GAGAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974721 6 - 110113093 GAGAAG i nomLeu3.chr13 T 3 C 0 s rheMac8.chr10 92701305 6 - 92844088 GAGAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368639 6 + 96509753 GAGAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838455 6 - 16982598 GAGAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641814 6 - 3785965 GAGAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263552 6 - 90373283 GGGAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20524 6 - 179258 GAGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513955 6 - 5823884 GAGAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167590 6 + 159171411 AAGAAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232933 6 + 16356641 AAGAAG i saiBol1.JH378156 T 3 C 0 s cebCap1.NW_016107870v1 1100243 6 + 1231380 AAGAAG i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e aotNan1.NW_018500483v1 2629440 35 + 11732439 I e otoGar3.GL873542 22794909 2 + 22939663 I a score=109277.000000 s hg38.chr20_KI270870v1_alt 56200 12 + 183433 GGCTGTGACCCG s panTro5.chr20 66380978 12 + 66533130 ggctgtgacccg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061698 12 + 62195757 GGCTGTGACCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447152 12 - 578057 GGCTGTGACCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974727 12 - 110113093 GGCTGTGACCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701311 12 - 92844088 GGCTGTGACCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368645 12 + 96509753 GGCTGTGACCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838461 12 - 16982598 GGCTGTGACCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641820 12 - 3785965 GGCTGTGACCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263558 12 - 90373283 GGCTGTGACCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20530 12 - 179258 GGCTGTGACCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513961 12 - 5823884 GGCTGTGACCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167596 12 + 159171411 GGCTGTGGCCTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232939 12 + 16356641 GGCTGTGGCCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100249 12 + 1231380 GGCTGTGGCCTC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22794911 12 + 22939663 GGCTGAAACCTA i otoGar3.GL873542 I 2 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56808093 1010 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e aotNan1.NW_018500483v1 2629440 35 + 11732439 I a score=321980.000000 s hg38.chr20_KI270870v1_alt 56212 32 + 183433 GTCTGAAAGCTTCCCAGAGACTGGC-TTAGCGG s panTro5.chr20 66380990 32 + 66533130 gtctgaaagcttcccagagactggc-ttagcgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061710 32 + 62195757 GTCTGAAAGCTTCCCAGAGACTGGC-TTAGCGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447164 32 - 578057 GTCTGAAAGCTTCCCAGAGACTGGC-TTAGCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974739 32 - 110113093 GTCTGAAAGCTTCCCAGAGACTGGC-TTAGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701323 32 - 92844088 GTCCGAAAGCTTCCCAGAGATTGGC-TTAGCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368657 32 + 96509753 GTCCGAAAGCTTCCCAGAGATTGGC-TTAGCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838473 32 - 16982598 GTCCGAAAGCTTCCCAGAGACTGGC-TTAGCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641832 32 - 3785965 GTCCGAAAGCTTCCCAGAGATTGGC-TTAGCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263570 32 - 90373283 GTCCGAAAGCTTCCCAGAGATTGGC-TTAGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20542 32 - 179258 GTCCGAAAGCTTCCCAGAGATTGGC-TTAGCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5513973 32 - 5823884 GTCTGAAAGCTTCCCAGAGACTGGC-TTAGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167608 31 + 159171411 ATCTGGAAGCTTCCCAGAGAGTGGA-TTAGCA- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232951 31 + 16356641 ATCTGGAGGCTTCCCAGAGAGTGGC-TTAGTA- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100261 31 + 1231380 ATCCGGAAGCTTCCCAGAGAGTGGC-TTAGTG- i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56809103 32 + 57149010 GTCTGGAAGCTTCCCTGAGACTGGC-TTAGCAG i micMur3.chr18 I 1010 C 0 s otoGar3.GL873542 22794923 33 + 22939663 ATCTGGAAGCTTCCTGGAGAGTGGCTTTAGCAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e dasNov3.JH569290 199299 373 - 397369 I e aotNan1.NW_018500483v1 2629440 35 + 11732439 I a score=106837.000000 s hg38.chr20_KI270870v1_alt 56244 10 + 183433 GATGACCCTG s panTro5.chr20 66381022 10 + 66533130 gatgaccctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061742 10 + 62195757 GATGACCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447196 10 - 578057 GATGACCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974771 10 - 110113093 GAGGACCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701355 10 - 92844088 GAAGACCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368689 10 + 96509753 GAAGACCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838505 10 - 16982598 GAAGACCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641864 10 - 3785965 GAAGACCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263602 10 - 90373283 GAAGACCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20574 10 - 179258 GAAGACCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5514005 10 - 5823884 GAAGACCCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167639 10 + 159171411 GATGACCCTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232982 10 + 16356641 GATGACCCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100292 9 + 1231380 GATGA-CCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629475 10 + 11732439 GATAACCCTG i aotNan1.NW_018500483v1 I 35 C 0 s micMur3.chr18 56809135 10 + 57149010 GAAATTCCTG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22794956 10 + 22939663 GAAAATCCTG i otoGar3.GL873542 C 0 I 2394 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e dasNov3.JH569290 199299 373 - 397369 I a score=118615.000000 s hg38.chr20_KI270870v1_alt 56254 11 + 183433 GGGAAGGAGAT s panTro5.chr20 66381032 11 + 66533130 gggaaggagat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061752 11 + 62195757 GGGAAGGAGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447206 11 - 578057 GGGAAGGAGAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974781 11 - 110113093 GGGAAGGAGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701365 11 - 92844088 GGGAAAGAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368699 11 + 96509753 GGGAAAGAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838515 11 - 16982598 GGGAAAGAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641874 11 - 3785965 GGGAAAGAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263612 11 - 90373283 GGGAAAGAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20584 11 - 179258 GGGAAAGAGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5514015 11 - 5823884 GGGAAAGAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167649 11 + 159171411 GGGAAGGAGAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16232992 11 + 16356641 GGGAAGGAGAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100301 11 + 1231380 GGGAAGGAGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629485 11 + 11732439 GGGAAGGAGAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56809145 11 + 57149010 GGGAAGGAGAT i micMur3.chr18 C 0 I 912 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e dasNov3.JH569290 199299 373 - 397369 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=889905.000000 s hg38.chr20_KI270870v1_alt 56265 103 + 183433 AGTGGGTGGAGCAGAGAGGCTGA-TTAGAGGCTGAGTCTTTATACGGAAGTGATGGTGCCCTAGAGGCACAGGAGGGAGTGAGTGCTGCCAGT-GGGGCAAGGAG s panTro5.chr20 66381043 103 + 66533130 agtgggtggagcagagaggctga-ttagaggctgAGTCTTTATACGGAAGTGATGGTGCCCTAGAGGCACAGGAGGGAGTGAGTGCTGCCAGT-GGGGCAAGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061763 103 + 62195757 AGTGGGTGGAGCAGAGAGGCTGA-TTAGAGGCTGAGTCTTTATACGGAAGTGATGGTGCCCTAGAGGCACAGGAGGGAGTGAGTGCTGCCAGT-GGGGCAAGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447217 103 - 578057 AGTGGGTGGAGCAGAGAGGCTGA-TTAGAGGCTGAGTCTTTATACGGAAGTGATGGTGCCCTAGAGGCACAGGAGGGAGTGAGTGCTGCCAGT-GGGGCAAGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974792 104 - 110113093 AGTGGGTGGAGCAGAGAGGCTGA-TTAGAGGCTGAGTCTTTATACAGAAGTGATGGTGCCCTAGGGGCACAGGAGGGAGTGAGTGCTGTCAGTCGGGGCAAGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701376 105 - 92844088 AGTGGGTGGAGCAGAGAGGCTGATTTAGAGGCCGAGTCTTTATACCGAAGTATTGGTGCCACAGGGGCACAGGAGGGAGTGAGTGCTGTCAGTGGGGGCAAGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368710 105 + 96509753 AGTGGGTGGAGCAGAGAGGCCGATTTAGAGGCCGAGTCTTTATACCGAAGTATTGGTGCCATAGGGGCACAGGAGGGAGTGAGTGCTGTCAGTGGGGGCAAGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838526 105 - 16982598 AGTGGGTGGAGCAGAGAGGCTGATTTAGAGGCCGAGTCTTTATACCGAAGTGTTGGTGCCATAGGGGCACAGGAGGGAGTGAGTGCTGTCAGTGGGGGCAAGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641885 105 - 3785965 AGTGGGCGGAGCAGAGAGGCCGATTTAGAGGCCGAGTCTTTATACCGAAGTGTTGGTGCCACAGGGGCACAGGAGGGAGTGAGTGCTGTCAGTAGGGGCAAGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263623 101 - 90373283 AGTGGGTGGAGCAGCGAGGACGATTTAGAGGCCAATTCTTTAT----AAGTGTTGGTGCCCTAGGGGCACAGGAGGGAGTGAGTGCTGTCAGTGGGGGCAAGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20595 105 - 179258 AGCGGGTGGAGCAGAGAGGCCGATTTAGAGGCCGAGTCTTTATACCGAAGTGTTGGTGCCATAGGGGCACAGGAGGGAGTGAGTGCTGTCAGTGGGGGCAAGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5514026 104 - 5823884 AGTGGGTGGAGCAGAGAGGCCGATTTAGAGGCCGAGTCTTTATACCGAAGTGTTGGTGCCCT-GGGGCACAGGAGGGAGTGAGTGCTGTCAGTGGGGGCAAGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167660 103 + 159171411 AGTGGGTGGAGAAGAGAGGCTGG-CTAGAGGCTGAGCCTTTATACAGAAGTGATGGAGCTCTCGGGGCAGGGAAGGGA-TGGCTACTGTCAGTATGGGCACGGAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16233003 103 + 16356641 AGCGGGTGGAGCAGAGAGGCTGG-TTAGAGGCTGAGCCTTAATACAGAAGTGATGGGGCTCTTGGGGCAGGGGAGGGA-TGGCTACTGTCAGTGTGGGCACGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100312 103 + 1231380 AGTGGGTGGAGCAGAGAGGCTGG-TTGGAGGCTGAGCCTTTATACAGAAGTGATGGGGCTCTCAGGGCAGGGGAGGGA-TGGCTACTGTCAGTGTGGGCCCGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629496 103 + 11732439 AGTGGGTGGAGCGGAGAGGCTGG-TTAGAGGCTGAGCCTTTACACAGAAGTGTTGGGGCTCTCGGGGCAGGGGAGGGA-TGGCTGCTGTCAGTGTGGGCACGGAG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199299 373 - 397369 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=508028.000000 s hg38.chr20_KI270870v1_alt 56368 57 + 183433 GGGCGGCTCCACCTGTGACCCTAACCCTAA-CCGCGTAGGGAACCTTCAGTGGGCCCA s panTro5.chr20 66381146 57 + 66533130 GGGCGGCTCCACCTGTGACCCTAACCCTAA-CCACGTAGGGAACCTTCAGTGGGCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061866 57 + 62195757 GGGCGGCTCCACCTGTGACCCTAACCCTAA-CCGCGTAGGGAACCTTCAGTGGGCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447320 57 - 578057 GGGCGGCTCCACCTGTGACACTAACCCTAA-CCGCGTAGGGAACCTTCAGTGGGCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974896 58 - 110113093 GGGTGGCTCCACCTGTGATCCTAACCCTAACCCGCGAAGGGAACCTTCAGTGGGCCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701481 56 - 92844088 GGGCAGCTCCCCCTGTGATCCTAACCCTAACCCACATAGGGAACCTTCA--GGGCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368815 56 + 96509753 GGGCAGCTCCCCCTGTGATCCTAACCCTAACCCACATAGGGAACCTTCA--GGGCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838631 56 - 16982598 GGGCAGCTCCCCCTGTGATCCTAACCCTAACCCACATAGGGAACCTTCA--GGGCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3641990 56 - 3785965 GGGCAGCTCCCCCTGTGATCCTAACCCTAACCCACATAGGGAACCTTCA--GGGCCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263724 56 - 90373283 GGGCAGCTCCACCTGTGATCCTAACCCTAACCCACATAGGGAACCTTCA--GGGCCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20700 56 - 179258 GGGCAGCTCCCCCTGTGATCCTAACCCTAACCCACATAGGGAACCTTCA--GGGCCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5514130 56 - 5823884 GGGCAGCTCCACCCGTGATCCTAACCCTAATCCACATAGGGAAACTTCA--GGGCCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167763 58 + 159171411 TGGCAGCTCCATCTGTGACCCTAACCCTCACCTGCATAGGTAGCCTTCAGTGGGCCCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16233106 58 + 16356641 TGGCAGCTCCATCTGTGACCCCAACCCTCACCTGCATAGGTAGCCTTCAGTGGGCCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100415 58 + 1231380 TGGCAGCTCCATCTGTGACCCTAACCCTCACTGGCATAGGTAGCCTTCAGTGGGCCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629599 58 + 11732439 TGGCGGCTCCATCTGTGACCCTAACCCTCACCTGCGTAGGTAGCCTTCAGTGGGCCCA i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 199672 47 - 397369 GAGCGGACCCGCCTGG-----------CTGCCCACGCAGGGAACCTCGAGTGGGCCCA i dasNov3.JH569290 I 373 I 97 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=2150057.000000 s hg38.chr20_KI270870v1_alt 56425 247 + 183433 TGATGGTGGCCCAAGCACACGAAGGTGTCTGTGCTCTGTGCCTTTGCTGAGCAGTGCAAGTCTGGGCCCAGGGGCTTCCCCTGAGGAGGGGAAGCCAAGGGtgtccacgaaaagagtcaaactctgtaaa-gtatttgaagagatttatcctgaaccaaatacgagtgacca-tggcccatgactcggc-ctcaggaggtcctggtgacatgtgcccgaggtggtcgggacacagcctggttttataca-t s panTro5.chr20 66381203 247 + 66533130 TGATGGTGGCCCAAGCACACGAAGGTGTCTGTGCTCTGTGCCTTCGCTGAGCAGTGCAAGTCTGGGCCCAGGGGCTTCCCCTGAGGAGGGGAAGCCAAGGGtgtccacgaaaagagtcaaactctgtaaa-gtatttgaagagatttatcctgaaccaaatacgagtgacca-tggcccatgacttggc-ctcaggaggtcctggtgacatgtgcccaaggtggtcgggacacagcctggttttataca-t i panTro5.chr20 C 0 C 0 s panPan2.chr20 62061923 247 + 62195757 TGATGGTGGCCCAAGCACACGAAGGTGTCTGTGCTCTGTGCCTTCGCTGAGCAGTGCAAGTCTGGGCCCAGGGGCTTCCCCTGAGGAGGGGAAGCCAAGGGtgtccacgaaaagagtcaaactctgtaaa-gtatttgaagagatttatcctgaaccaaatacgagtgacca-tggcccatgactcggc-ctcaggaggtcctggtgacatgtgcccaaggtggtcgggacacagcctggttttataca-t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447377 242 - 578057 TGTTGGTGGCCCAAGCACACAAAGGTGTCTGTGCTCTGTGCCTTCGCTGAGCAGTGCAAGTCTGGGCCCAGGG--CTCCCCTGAGGAGGGGAAGCCAAGGGTGTCCACG-aaagagtc-aactctgtaaa-gtatttgaagagatttatcctgaaccaaata-gagtgaccg-tggcccatgactcggc-ctcaggaggtcctggtgacatgtgcccgaggtggtcgggacacagcctggttttataca-t i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109974954 246 - 110113093 TCATGGTGGCCCAAGCACACGAAGGTGTCTGTGCTCTGTGCCTTCGCTGAGCAGTGCAAGTCTGGGCCCAGGG-CATCCCCTGAGGAGAGGAAACCAAGGGtgtccacgaaaagagtcaaactctgtaaa-gtatttgaagagatttatcctgaaccaaataagagagacca-tggcccgtgacgcagc-ctcaggaggtcctggcgacatatgcccgaggtgtttgggacgcagcctggttttataca-t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701537 244 - 92844088 TCAAGGGGGCCCAAGCACACGAAGGTATCTGCGCTCTGTGCCCTCGCTGAGCAGTGCAAGTCAGGGCCCAGGG-GCTCCTCTGAGGAGGGGAAGCCAAGGGtgtccacgagaagagtcaaa--ctgtaaa-gtatttgaagagatttatcctgaaccaaatatgagtgacca-tggcccgtggcgctgc-ctcaggaggtcctggtgacatgtgtccgaggtgatcgggacacagtctggttttataca-t i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96368871 244 + 96509753 TCAAGGGGGCCCAAGCACACGAAGGTGTCTGCGCTCTGTGCCCTCGCTGAGCAGTGCAAGTCAGGGCCCAGGG-GCTCCTCTGAGGAGGGGAAGCCAAGGGtgtccacgagaagagtcaaa--ctgtaaa-gtatttgaagagatttatcctgaaccaaatatgagtgacca-tggcccgtggcgctgc-ctcaggaggtcctggtgacatgtgtccgaggtggtcgggacacagtctggttttataca-t i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838687 244 - 16982598 TCAAGGGGGCCCAAGCACATGAAGGTGTCTGCGCTCTGTGCCCTCGCTGAGCAGTGCAAGTCAGGGCCCAGGG-GCTCCTCTGAGGAGGGGAAGCCAAGGGtgtccacgagaagagtcaaa--ctgtaaa-gtatttgaagagatttatcctgaaccaaatatgagtgacca-tggcccgtggcgctgc-ctcaggaggtcctggtgacatgtgtccgaggtgatcgggacacagtctggttttataca-t i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3642046 246 - 3785965 TCATGGGGGCCCAAGCACACGAAGGTGTCTGCGCTCTGTGCCCTCGCTGAGCAGTGCAAGTCAGGGCCCAGGG-GCTCCTCTGAGGAGGGGAAGCCAAGGGtgtccacgagaagagtcaaactctgtaac-gtatttgaagagatttatcctgaaccaaatatgagtgacca-tggcccgtggcgctgc-ctcaggaggtcctggtgacatgtgtccgaggtgatcgggacacagtctggttttataca-t i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90263780 246 - 90373283 TCATGGGGGCCCAAGCACACGAAGGTGTCTGCGCTCTGTGCCCTCGCTGAGCAGTGCAAGTCAGGGCCCAGGG-GCTCCTCTGAGGAGGGGAAGCCAAGGGtgtccacgagaagagtcaaactctgtaaa-gtatttgaagagatttatcctgaaccaaatatgagtgacca-tggcccgtggcgctgc-ctcaggaggtcctggtgacatgtgtccgaggtggtcgggacacagtctggttttataca-t i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 20756 246 - 179258 TCATGGGGGCCCAAGCACACGAAGGTGTCTGCGCTCTGTGCCCTCGCTGAGCAGTGCAAGTCAGGGCCCAGGG-GCTCCTCTGAGGAGGGGAAGCCAAGGGtgtccacgagaagagtcaaactctgtaca-gtaattgaagagatttatcctgaaccaaatatgagtgacca-tggcccgtggcactgc-ctcaggaggtcctggtgacatgtgtccgaggtgatcgggacacagtctggttttacaca-t i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5514186 246 - 5823884 TCATAATGACCCAAGCACACGAAGGTGTCTGCGCTCTGTGTCCTCACTGAGCAGTGCAAGTCAGGGCCCAGGG-GCTCCTCTGAGGAGGGGAAGCCAAGGGtgtccacaaaaagagtcaaactctgtaaa-gtatttgaagaggtttatcctgaaccaaatatgagtgacca-tggcccgtgacgctgc-ctcaggaggtcctggtggcatgtgtccgaggtggtcgggatgcagtctggttttataca-t i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58167821 244 + 159171411 TCATGGTGGCCCAAGCACATGAAGGCGTCTGCATCCTGTGCCCTCACTGAGCAGTGCATGTCTGTGCCCAGGG-GCTCCCCTGAGGAGGGGATGCCAA-GGtgtccatggaaagagtcaaactctgtaaa-gtatttgaagagatttattctgagccgaatgtgagtgaccaatggcctgtgacacagccttcaggagaccctgagaacatgtgccc-aggtggttgagacacagcctggtctt-taca-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16233164 245 + 16356641 TCATGGTGGCCCAAGCACATGAAGGCATCTGCACCCTGTGCCCTCACTGAGCAGTGCATGTCTGTGCCCAGGG-GCTCCCCCAAGGAGCGGATGCCAA-GGTGTCCATTGaaagagtcaaactctgtcaa-gtatttgaagagatttattctgagtcaaatatgagtgaccagtgggctgtgacacagctctcaggagaccctgagaagatgtgcgc-aggttgttgagacacagcctggtcttacaca-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100473 243 + 1231380 TCATGGTGGCCCAAGCACATGAAGGCACCTGCACCCTGTGTCCTCACTGAGCAGTGCATGTCTATGCCCAGGG-GCT-CCCTGAGGAGGGGATGCCAA-GGtgtccatggaaagagtcaaactctgtaaa-gtatttgaagagatttattctgagccaaatatgagtgaccaatggcctgtgacacagccctcaggaga-cctgagaagatgtgccc-aggtgcttgagacacagcctgctcttgtaca-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629657 246 + 11732439 TGATGGTGGCCCAAGCACATGAAGGCGTCTGCACCGTGTGCTCTCACTGAGCAGTGTATGTCTGTG-CCAGGG-GCTCCCCCGAGGAGGGGATGCCAA-GGtgtccatgaaaagagtcaaactccgtaaacgtatttgaagagatttattctgagccaaatatgagtgaccaatggcctgtgacacagccctcaggagcccctgagaagatgtgccc-aggtgcttgagacacagcctggtcttatacgt- i aotNan1.NW_018500483v1 C 0 I 18 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199719 97 - 397369 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=377928.000000 s hg38.chr20_KI270870v1_alt 56672 51 + 183433 ttgaagggtgacatgagacatcaatcaata-----------------------tgtacaagatgtacattggtt s panTro5.chr20 66381450 51 + 66533130 ttgaagggtgacatgagacatcaatcaata-----------------------tgtacaagatgtacattggtt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62062170 51 + 62195757 ttgaagggtgacatgagacatcaatcaata-----------------------tgtacaagatgtacattggtt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447619 50 - 578057 ttgaagggtgacatgagacatcaatcaata-----------------------tgtacaagatgtacattgg-t i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109975200 74 - 110113093 ttgaagggtgacatgagacatcaatcaatatctaccttgtacgtcagtcagtgtatacaagatgtacattggtt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701781 74 - 92844088 ttgaagggtgacatgagccattagtcagtatctacattgtacgttaatcagtatgtacaagatgtacattggtt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96369115 74 + 96509753 ttgaagggtgacatgagccattagtcagtatctacattgtacattaatcagtatgtacaagatgtacattggtt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16838931 74 - 16982598 ttgaagggtgacatgagccattagtcagtatctacattgtacattaatcagtatgtacaagatgtacattggtt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3642292 74 - 3785965 ttgaagggtgacatgagccattagtcaatatctacattgtacattaatcaatatgtacaagatgtacattggtt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90264026 74 - 90373283 ttgaagggtgacgtgagccattagtcaatatctacattgtacgttaatcaatatgtacaagatgtacattggtt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 21002 65 - 179258 ttgaagggtgacatgagccgttagtcaatatctacattgtacattaat---------caagatgtacattggtt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5514432 74 - 5823884 ttgaagggtgacatgagacgttagtcagtatctacgttgtacattaatcaatatgtacaagatgtacattggtt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168065 48 + 159171411 ttgaagggagacattagacatcagtcaata-----------------------tgtacaaggtgtgcattg--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16233409 48 + 16356641 ttgaagggagacattagacgtcagtcaata-----------------------tgtacaacgtgtacactg--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1100716 48 + 1231380 ttgaagggggacgttagacgtcagtcaata-----------------------tgtacaaggtgtacattg--- i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199719 97 - 397369 I e aotNan1.NW_018500483v1 2629903 18 + 11732439 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=4497259.000000 s hg38.chr20_KI270870v1_alt 56723 522 + 183433 tggtctggaaaggcaggacaactcaaagtgtgggcttccaggccataggtagataagacacaaacagctgcattcttttgggtctttgatcagtgtttcactgaacacacaatttacatgtgagagggggtagagaaatagtcacttatgccttaggctgactcagtgaatctgcatttttacataagcagtagggcagaggaagccatcggatgtgcatttgtctcaggtgggcagtgggatgactttgatgagttctgcctgtccattgtcccgcacctgtgaagggaagctatccatttacgttgccagggtgaaattcagcagaacagttttagggcaaagatcttgaagcccaagaagagtttctctgtggggaaattgtgagggaggatgtagacttccacacaatccttgtcactatcttattcgggaataaaatgggaggcaggttggcctgacgtgctttggcttagtgattttggggtccctagatttattttcctttcccaAGTACTTATT s panTro5.chr20 66381501 522 + 66533130 tggtctggaaaggcaggacaactcaaagtgtgggcttccaggccataggtagataagacacaaacagctgcattcttttgggtctttgatcagtgtttcactgaacacacaatttacatgtgagagggggtagagaaatagtcacttatgccttaggctgactcagtgaatctgcatttttacataagcagtagggcagaggaagccatcggatgtgcatttgtctcaggtgggcagtgggatgactttgatgagttctgcctgtccattgtcccgcacctgtgaagggaagctatccatttacgttgccagggtgaaattcagcagaacagttttagggcaaagatcttgaagcccaagaagagtttctctgtggcgaaattgtgagggaggatgcagacttccacacagtccttgtcactatcttattcgggaataaaatgggaggcaggttggcctgacgtgctttggcttagtgattttggggtcctgagatttattttcctttcccaAGTACTTATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62062221 522 + 62195757 tggtctggaaaggcaggacaactcaaagtgtgggcttccaggccataggtagataagacacaaacagctgcattcttttgggtctttgatcagtgtttcactgaacacacaatttacatgtgagagggggtagagaaatagtcacttatgccttaggctgactcagtgaatctgcatttttacataagcagtagggcagaggaagccatcggatgtgcatttgtctcaggtgggcagtgggatgactttgatgagttctgcctgtccattgtcccgcacctgtgaagggaagctatccatttacgttgccagggtgaaattcagcagaacagttttagggcaaagatcttgaagcccaagaagagtttctctgtggcgaaattgtgagggaggatgcagacttccacacagtccttgtcactatcttattcgggaataaaatgggaggcaggttggcctgacgtgctttggcttagtgattttggggtcctgagatttattttcctttcccaAGTACTTATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 447669 521 - 578057 tggtctggaaaggcaggacaactcaaagtgtgggcttctaggccataggtagataagacacaaacagctgcattcttttcggtctttgatcagtgtttcactgaacacacaatttacatgtgagagggggtagagaaatagtcacttatgccttaggctgactcagtgaatctgcatttttacataagcagtagggcagaggaagccatcggatgtgcatttgtctcaggtgggcagtgggatgactttgacgagttctgcctgtccattgtcccgcacctgtgaagggaagctatccatttacgttgccagggtg-aattcagcagaacagttttagggcaaagatcttgaagcccaagaagagtttctctgtggggaaattgtgagggaagatgtagacttccacacaatccttgtcgctatcttattcgggaataaaatgggaggcaggttggcctgacgtgctttggcttagtgattttggggtcctgagatttattttcctttcccaAGTACTTATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109975274 521 - 110113093 tggtctggaaaggcaggacaactcaaagtgtgggcttccaggccataggtagataagacacaaacagctgcattcttttgggtttttgatcagcgtttcactgaacacacaatttacatgtgagagggggtagagaaatagtcacttatgcctta-gctgactcagtgaatctgcatttttacataagcagtagggcagaggaagccatcagatgtgcatttgtctcaggtgggcagtgggatgactttgatgagttctgcctgtccattgtcccgcacctgtgaagggaagctatccattcacgttgccagggtgaaattcagcagaacagttttagggcaaagatcttgaagcccaagaagagtttctttttggggaaattgtgagggaggatgtagctttccacacaatccttgtcgctatcttattcaggaataaaatgggaggcaggttggcctgacgtactttggcttagtgattttggggtcctgagatttattttcctttcccaAGTACTTTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92701855 506 - 92844088 tcatctggaaaggcaggacaactc--ggtgtgggcttccgggccgcagggaggtcagagacaaacagttgcaatcttttaggtctttgaacagcgtttcactgaacacacaatttccatgcgag-gcgggtagagaaatagtcactta----------tgactcagtgaatctgcatttttacata---aatagggcagaggaagccgtcagatctgcgtttgtctcagatgggcagcgggatgactttgatgcgttctgcctgcccattgtcccgcacctgcgaaggtgagctatcaatttacgttgccagggtgaaattcaacagaactgttttagggcaaagatcttgaagcccaagaagagtttctttgtggggaaattgtgagggaggatgtagccttccaaattatctttgtcgctatcttattcaggaataaaatgggaggcaggttggcctgacatactttggcttagtgattttggggtcctgaaatttattttcctttcccaAGTACTTGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96369189 506 + 96509753 tcatctggaaaggcaggacaactc--ggtgtgggcttccgggccgcagggaggtcagagacaaacagttgcaatcttttaggtctttgaacagcgtttcactgaacacacaatttccatgcgag-gcgggtagagaaatagtcactta----------tgactcagtgaatctgcatttttacata---aatagggcagaggaagccgtcagatctgcgtttgtctcagatgggcagcgggatgactttgatgcgttctgcctgcccattgtcccgcacctgcgaaggtgagctatcaatttacgttgccagggtgaaattcaacagaactgttttagggcaaagatcttgaagcccaagaagagtttctttgtggggaaattgtgagggaggatgtagccttccaaattatctttgtcgctatcttattcaggaataaaatgggaggcaggttggcctgacatactttggcttagtgattttggggtcctgaaatttattttcctttcccaAGTACTTGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16839005 506 - 16982598 tcatctggaaaggcaggacaactc--ggtgtgggcttccgggccgtagggaggtcagagacaaacagttgcaatcttttaggtctttgaacagcgtttcactgaacacacaatttccatgcgag-gcgggtagagaaatagtcactta----------tgactcagtgaatctgcgtttttacgta---aatagggcagaggaagccgtcagacctgcgtttgtctcaggtgggcagcggcatgcctttgatgcgttctgcctgcccattgtcccgcacctgcgaaggtaagctatcgatttacgttgccagggtgaaattcaacagaactgttttagggcaaagatcttgaagcccaagaagagtttctttgtggggaaattgtgagggaggatgtagccttccagattatctttgtcgctatcttattcaggaataaaatgggaggcaggttggcctgacatactttggcttagtgattttggggtcctgaaatttattttcctttcccaAGTACTTGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3642366 506 - 3785965 tcatctggaaaggcaggacaactc--ggtgtgggcttccaggccgtagggaggtcagagacaaacagtggcaatcttttaggtctttgaacagcgtttcactgaacacacaatttccatgcgag-gcgggtagagaaatagtcactta----------tgactcagtgaatctgcatttttacata---aatagggcagaggaagccatcagatctgcatttgtctcagatgggcagcgggatgactttgatgcgttctgcctgcccattgtcccgcacctgcgaaggtaagctatcaatttacgttgccagggtgaaattcaacagaactgttttagggcaaagatcttgaagcccaagaagagtttctttgtggggaaattgtgagggaggatgtagccttccaaattatctttgtcgctatcttattcaggaataaaatgggaggcaggttggcctgacatactttggcttagtgattttagggtcctgaaatttattttcctttcccaAGTACTTGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90264100 506 - 90373283 tcatctggaaaggcaggacaactc--agtgtgggcttccaggctgtagggaggtcagagacaaacagttgcaatcttttaggtctttgaacagcgtttcactgaacacacaatttccatgcgag-gcgggtagagaaatagtcactta----------tgactcagtgaatctgcatttttacata---aatagggcagaggaagccgtcagatctgcgtttgtctcagatgggcagcgggatgactttgacgcgttctgcctgcccattgtcccgcacctgcgaaggtaagctatcaatttacgttgccagggtgaaattcaacagaactgttttagggcaaagatctcgaagcccaagaagagtttctttgtggggaaattgtgagggaggatgtagccttccaaattatcttcgtcgctgtcttattcaggaataaaatgggaggcaggttggcctgacatactttggcttagtgattttggggtcctgaaatttattttcctttcccaAGTACTTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 21067 506 - 179258 tcatctggaaaggcaggacaactc--ggtgtgggcttccaggccgtagggaggtcagagacaaacagttgcaatcttttaggtctttgaacagcgtttcactgaacacacaatttccatgcgag-gcgggtagagaaatagtcactta----------tgactcagtgaatctgcatttttacata---aatagggcagaggaagccatcagatctgcatttgtctcagatgggcagcgggatgactttgatgcgttctgcctgcccattgtcccgcacctgcgaaggtaagctatcaatttacgttgccagggtgaaattcaacagaactgttttagggcaaagatcttgaagcccaagaagagtttctttgtggggaaattgtgagggaggatgtagccttccaaattatctttgtcgctatcttattcaggaataaaatgggaggcaggttggcctgacatactttggcttagtgattttggggtcctgaagtttattttcctttcccaAGTACTTGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5514506 506 - 5823884 tcatctggaaaggcaggacaactc--agtgtgggcttccaggccatagggaggtcagagacaaacagttgcaatcttttaggtctttgaacagtgtttcactgaacacacaatttccatgtgag-gcgggtagagaaatagtcactta----------tgactcagtgaatctgcatttttatata---aatagggcagaggaagccatcagttatgcatttgtctcagaggggcatcgggatgactttgatgccctctgcctgcccattgtcccgcacctgcgaaggtaagctatcaatttacgttgccagggtgaaattcaacagaactgttttagggcaaagatcttgaagcccaagaagagtttctttgtggggaaattgtgagggaggatgtagccttccaaattatctttgtcactatcttattcaggactaaaatgggaggcaggttggcctgacatactttggcttagtgattttaggatcctgaaatttattttcctttcccaAGTACTTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168113 516 + 159171411 tggtcggggaaggcaggacaggtcaaagtatggccttctgagtcagaggtggataaaagac-aacagttgcattcttttgggtctttgatcagcctttcactgcacacacaatttacatgtgag-gggggcagggaaatagtcacttacgccttcgtctaacttagtgagtctgcatttttacataaccaacagggcagaggaagcaac-agatatgcac---tcgcaggagagcagagggatgacttcaatgaacttcacctgtcctttgtcctgcacctgtgaagataaacgatcagtttatgttgccagagtgaaattcagcagaactgttttagggcaaagatcttgatgcccataaagcatttctctgtgggaaaattgtgaggagttatgtagcctttaaaaaaatctttgtagcgatcttatgtatgaataaaatgggaggcaggttggcctgacatgctttggcttagtgattgtggggtcccaagatttattttccattcacaAGTACTTTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16233457 515 + 16356641 tggtctggagaggcaggacagctccaagtgtgctcttccgagtcagaggtggataagagac-aacagttgcattcttttgggtctttgatcagcctttcactgtacacacaatttacatgtgag-gggggcagggaaatagtcacttatgccttcgtctggctcagtgagtctgtatttttacataaccaatagggcggaggaagcaat-agatacgcac---tctcaggagagcagagggatgactttgatgaacattacctgtcctttgtcctgcacctgtgaagataaactatcaatttatgttgccagagtgaagttcaacagaactgttttaggacagagatcttgatgcccataaagcatttctctgtgggaaaattgtgaggagttatgtagccttttaaaacatctttgtagctatcttatgtatgaataaaatgggagacaggttggcctgacatgctttggcttcgtgattgtggggtcccaaga-ttattttccgttcacaAGTACTTTTT i saiBol1.JH378156 C 0 I 381 s cebCap1.NW_016107870v1 1100764 515 + 1231380 tggtctggaaaggcaggtcagcacaaagtgtggccttccgaggcagaggtggataagagac-aacagttgcattcttttgggtctttgatcagcctttcactgtacacacaattcgcatgtgag-aggggcagggaaatagttacttatgccttcatctggctcagtgagtctgcatttttacataaccaacagggcagaggaagcagt-agatatgcac---tctcaggagagcagaggg-tgactttgatgaacttcacctgtcctttgtcctgcacctgtgaagataaactatcaatttatgttgccagagtgaaattcaacagaactgttttagggcagagatcttgacgcccataaagcatttctctgtgggaaaattgtgaggagttatgtagccttttaaaaaatctttgtagctatcttgtatatgaataaaatgggaggcaggttggcctgacatgctttggcttcgtgattgtggggccccaagatttattttccattcacaAGTACTTTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2629921 490 + 11732439 tggtctggaaaggcaggacagctccaagcgtggccttccgagtcagaggagggttagagac-aacagttgcattcttttgggtctttgatcagcctt----tgtacacacaatttacatgcgag-gggggcagggaaatagtcacttatgccttcgtctgactcagtgagtctgcgttttcacataaccaatagggcggaggacgcgg--------------------ggagagcagaggggcgactttgacggactccacctgcccttcgtcctgcacctgtgacgagaaactatcaatttatgttgccagagtgaaattcaacagaactgttttagggcaaagatcttgatgcctgtaaggcatttctttgtgggaaaattgtgaggagttatgtagcctttaaaaaaatctttgtagctatcttatgtgtgaataaaatgggaggcaggttggcctgacatgctttggcttagtga------ggtcccaagatttattttccgttcaGAAATACTTTTT i aotNan1.NW_018500483v1 I 18 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47564596 608 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199719 97 - 397369 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=26874.000000 s hg38.chr20_KI270870v1_alt 57245 3 + 183433 ACA s panTro5.chr20 66382023 3 + 66533130 ACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62062743 3 + 62195757 ACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448190 3 - 578057 ACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109975795 3 - 110113093 ACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92702361 3 - 92844088 ACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96369695 3 + 96509753 ACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16839511 3 - 16982598 ACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3642872 3 - 3785965 ACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90264606 3 - 90373283 ACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 21573 3 - 179258 ACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5515012 3 - 5823884 ACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168629 3 + 159171411 ATA i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1101279 3 + 1231380 ATA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2630411 3 + 11732439 ATA i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47565204 3 + 47698779 ACG i canFam3.chr24 I 608 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199719 97 - 397369 I e saiBol1.JH378156 16233972 381 + 16356641 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=168429.000000 s hg38.chr20_KI270870v1_alt 57248 17 + 183433 AAGTAGCAGGCTTCAAA s panTro5.chr20 66382026 17 + 66533130 AAGTAGCAGGCTTCAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62062746 17 + 62195757 AAGTAGCAGGCTTCAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448193 17 - 578057 AAGTAGCAGACTTCAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109975798 17 - 110113093 AAGTAGCAGGCTTCAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92702364 17 - 92844088 ATGTAGCAGGCTTCAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96369698 17 + 96509753 ATGTAGCAGGCTTCAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16839514 17 - 16982598 ATGTAGCAGGCTTCAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3642875 17 - 3785965 ATGTAGCAGGCTTCAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90264609 17 - 90373283 ATGTAGCAGGCTTCAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 21576 17 - 179258 ATGTAGCAGGCTTCAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5515015 17 - 5823884 ATGTAGCAGGCTTCAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168632 17 + 159171411 AAGTAGCAGGCTTCAAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16234353 17 + 16356641 AAGTAGCAGGTTTCAGG i saiBol1.JH378156 I 381 C 0 s cebCap1.NW_016107870v1 1101282 17 + 1231380 ATGTAGCAGGCTTCAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2630414 17 + 11732439 AAGCAGCAGGCCTCAGG i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47565207 17 + 47698779 GGGCGGGGGGCTCCAGA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199719 97 - 397369 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=1035708.000000 s hg38.chr20_KI270870v1_alt 57265 118 + 183433 CTTGGAGATCTCACAACCCCAAGTAACATTCTGTTAGAAACCATGGGACCACCCACACCGTTGCTGTGGACTACAAGCTCGTGTCACTGG--------------------------------------CAGCTCAAAGTAGAAAGTATC-AGACACC s panTro5.chr20 66382043 118 + 66533130 CTTGGAGATCTCACAACCCCAAGTAACATTCTGTTAGAGACCATGGGACCACCCACACCGTTGCTGTGGACTACAAGCTCGTGTCACTGG--------------------------------------CAGCTCAAAGTAGAAAGTATC-AGACACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62062763 118 + 62195757 CTTGGAGATCTCACAACCCCAAGTAACATTCTGTTAGAGACCATGGGACCACCCACACCGTTGCTGTGGACTACAAGCTCGTGTCACTGG--------------------------------------CAGCTCAAAGTAGAAAGTATC-AGACACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448210 118 - 578057 CCTGGAGATCTCACAACCCCAAGTAACATCCTGTTAGAAACCATGGGACCACCCACACCGTTGCTGTGGACTACAAGCTCGTGTCACTGG--------------------------------------CAGCTCAAAGCAGAAAGTATC-AGACACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109975815 118 - 110113093 CTTGGAGATCTCACAATCCCAAGTAACATTCCTTAAGAAACCATGGGACCACCCACACAGTTGCTGTGGACTACAAGCTTGCGTCACTGG--------------------------------------CAGCTCAAAGTAGAAAGTATC-AGACACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92702381 117 - 92844088 CTTGGAGATCTCACAACCCCAACTAACATTCCATTAGAAACCAC-GGACCGGTCACACAGCTGCTGTGGACTACACGCTCGCATCACTGG--------------------------------------CAGCTCAAAATAGAAAGTGTC-AGACACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96369715 117 + 96509753 CTTGGAGATCTCACAACCCCAACTAACATTCCATTAGAAACCAC-GGACCGGTCACACAGCTGCTGTGGACTACAAGCTCGCATCACTGG--------------------------------------CAGCTCAAAATAGAAAGTGTC-AGACACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16839531 117 - 16982598 CTTGGAGATCTCACAACCCCAACTAACATTCCATTAGAAACCAC-GGACCAGTCACACAGCTGCTGTGGACTACAAGCTCGCATCACTGG--------------------------------------CAGCTCAAAATAGAAAGTGTC-AGACACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3642892 118 - 3785965 CTTGGAGATCTCACAACCCCAAGTAACATTCCATTAGAAACCACGGGACCGGTCACACAGCTGCTGTGGACTACAAGCTCGCATCACTGG--------------------------------------CAGCTCAAAATAGAAAGTGTC-AGACACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90264626 118 - 90373283 CCTGGAGATCTCACAACCCCAAGTAACATTCCATTATAAACCATGGGACCGGTCACACAGCTGCTGTGGACTACAAGCTCGCATCACTGG--------------------------------------CAGCTCAAAGTAGAAAGTGTC-AGACACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 21593 118 - 179258 CTTGGAGATCTCACAACCCCAAGTAACATTCCATTAGAAACCACGGGACCGGTCACACAGCTGCTGTGGACTACAAGCTCGCATCACTGG--------------------------------------CAGCTCAAAATAGAAAGTGTC-AGACACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5515032 118 - 5823884 CTTGGAGATCTCACAACCCCAAGTAACATTCCATTAGAAACCATGGGACCGGTCACACAGCTGCTGTGGACTACAAGCTTGTGTCACTGG--------------------------------------CAGCTCAAAGTAGAAAGTGTC-AGATACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168649 108 + 159171411 CTTGGAGATTTCAAAAG-CCAAGTAACATTCCATGAGAAACCGTGGGACCATCTACGCAGTTGCTATGGACTACAAGCTCCCAC-----------------------------------------------CTCAAAGTAGAAAGTGTC-AGGCACA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16234370 109 + 16356641 CTTGGAGATCTCAAAAACCCAAGTAACATTCCATGAGAAACCATGGGACCACCTACACAGTTGCTGTGGACTACAAGCTCCTGC-----------------------------------------------CTCAAAGTAGAAAATGTC-AGGCACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1101299 109 + 1231380 CTTGGAGATCTCAAAAACCCAAGTAACATTCTATGAGAAACCGTGGGACCACCTACGCAGGTGCTGTGGACTACAAGCTCCCGC-----------------------------------------------CTCAAAGTAGAAAGTGTC-AGGCACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2630431 108 + 11732439 CTTGGAGATCTCAAAAACCCAAGTAACATTCCATGAGAAACCATGGGGCCACCTGCGCAGTCG-TGTGGACTACAGGCTCCCAC-----------------------------------------------CTCCAAGTAGACAGTGTT-GGGCACA i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47565224 155 + 47698779 CGTGCAGACCCCACAGTCC--AGGGAAATCCCAGGAGAAATGGTGAGAGCAGCCGCAGAGCCACTGAGAACCGTGAACTCACGTCACTCAGtttatttttttatttttttttttttttttACGTCACTCAGTTTAAAACAGGAAATGTCGAGCTGTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 199816 116 - 397369 CTTTGGGGTCACACAACTC--AGTAAGAGCCCTTTAAAAAGCTTGGGACCACCCACAGCATTGCCATGACCTCTGACCTCACGTCACTAT--------------------------------------TGTATCAGAACAAAGTGTGCG-GGTCGCC i dasNov3.JH569290 I 97 I 312 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=969758.000000 s hg38.chr20_KI270870v1_alt 57383 106 + 183433 CCCCACCTCGGGGGACCTCTGTTTCAGATCTCAGGTGACTCTTCACCTTGAAGACATTCAGCTTAATCAAAACCTC-TTTTCTGACCCTTTGTGCCAGCCTTCCT---GG s panTro5.chr20 66382161 106 + 66533130 CCCCACCTCGGGGGACCTCTGTTTCAGATCTCAGGTGACTCTTCACCTTGAAGACATTCAGCTTAATCAAAACCTC-TTTTCTGACCCTTTGTGCCAGCCTTCCT---GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62062881 106 + 62195757 CCCCACCTCGGGGGACCTCTGTTTCAGATCTCAGGTGACTCTTCACCTTGAAGACATTCAGCTTAATCAAAACCTC-TTTTCTGACCCTTTGTGCCAGCCTTCCT---GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448328 107 - 578057 CCCCACCTCGGGGGACCTCTGTTTCAGATCTCAGGTGACTCTTCACCTTGAAGACATTCAGCTTAATCAAAACCTCTTTTTCTGACCCTTTGTGCCAGCCTTCCT---GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109975933 109 - 110113093 CCCCACCTCGGGGGACCTCTGTTTCAGCTCTCAGGTGACTCTTCACCTTGAAGACATTCAGCTTAATCACAACCTC-TTTTCTGACCCTTTGTGCCAGCCTTCCTTGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92702498 104 - 92844088 CCCCACCTTGGGGGACCTCTGTTTCAGATCTCAGGTAACTCTTCACCTTGAAGACATTCAGCTTAATCAAAA--TC-TTTTCTGACCCTTTGTGCCAGCCTTCCT---GG i rheMac8.chr10 C 0 I 3 s macFas5.chr10 96369832 104 + 96509753 CCCCACCTTGGGGGACCTCTGTTTCAGATCTCAGGTAACTCTTCACCTTGAAGACATTCAGCTTAATCAAAA--TC-TTTTCTGACCCTTTGTGCCAGCCTTCCT---GG i macFas5.chr10 C 0 I 5 s macNem1.NW_012014244v1 16839648 104 - 16982598 CCCCACCTTGGGGGACCTCTGTTTCAGATCTCAGGTAACTCTTCACCTTGAAGACATTCAGCTTAATCAAAA--TC-TTTTCTGACCCTTTGTGCCAGCCTTCCT---GG i macNem1.NW_012014244v1 C 0 I 3 s cerAty1.NW_012001373v1 3643010 104 - 3785965 CCCCACCTTGGGGGACCTCTGTTTCAGATCTCAGGTAACTCTTCACCTTGAAGACATTCAGCTTAATCAAAA--TC-TTTTGTGACCCTTTGTGCCAGCCTTCCT---GG i cerAty1.NW_012001373v1 C 0 I 3 s chlSab2.chr2 90264744 106 - 90373283 CCCCACCTCGGGGGACCTCTGTTTCAGATCTCAGGTAACTCTTCACCTTGAAGACATTCAGCTTAATCAAAATCTC-TTTTCTGACCCTTTGTGCCAACCTTCCT---GG i chlSab2.chr2 C 0 I 3 s manLeu1.NW_012101652v1 21711 104 - 179258 CCCCACCTTGGGGGACCTCTGTTTCAGATCTCAGGTAACTCTTCACCTTGAAGACATTCAGCTTAATCAAAA--TC-TTTTCTGACCCTTTGTGCCAGCCTTCCT---GG i manLeu1.NW_012101652v1 C 0 I 6790 s colAng1.NW_012114444v1 5515150 106 - 5823884 CCCCACCTCGGGGGACCTCTGTTTCAGATCTCAGGTAACTCTTCACCTTGAAGACATTCAGCTTAATCAAAATCTC-TTTTCTGACCCTTTGTGCCAGCCTTCCT---GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168757 105 + 159171411 CCCCACCT-GGGGGACCCGTGCTTCAGATCTTGGGTAACTCTTCACCTTGAAGACACTCAGCTTCATCAAATCCTC-TTCTCTGACCCTTTGTGCCAGGCTTCCT---CG i calJac3.chr5 C 0 I 7 s saiBol1.JH378156 16234479 105 + 16356641 CCCCAACT-GGGGACCCTGTGCTTCAGATCTTGGGTAACTCTTCACCTTGAAGACACTCCACTTCATCCAACCCTC-TCCTCTGACCCTTCCTGCCAGGCTTCCT---CA i saiBol1.JH378156 C 0 I 7 s cebCap1.NW_016107870v1 1101408 105 + 1231380 CCCCACCC-GGGGGACCCGTGCTTCAGATCTTGGGTAACTCTTCACCTTGAAGACACTCCGCTTCATCCAGTCCTC-TCCTCTGACCCTTTGTGCCAGGCTTCCT---CG i cebCap1.NW_016107870v1 C 0 I 7 s aotNan1.NW_018500483v1 2630539 101 + 11732439 CCCCACCT-GGG--ACCCGTGCTGCAGATCTCGGGTAACTC--CACCCTGAAGACGCTCAGCTTCATCGCATCCTC-CTCTCTGACCCTTTGTGCCAGGATTCCT---CG i aotNan1.NW_018500483v1 C 0 I 7 s canFam3.chr24 47565379 86 + 47698779 CCCCACCCGAGAGGGCATCGGCGCCA-ACCCAGGGGGACTCTTC-CACGACAGACGCT----------------TC-CCTTCTGGCCCCGTGTACCAG--TCACT---GG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199932 312 - 397369 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=157402.000000 s hg38.chr20_KI270870v1_alt 57489 18 + 183433 ---AGGGGGCTCCCCAAAGAA- s panTro5.chr20 66382267 18 + 66533130 ---AGGGGGCTCCCCAAAGAA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62062987 18 + 62195757 ---AGGGGGCTCCCCAAAGAA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448435 18 - 578057 ---AGGGGGCTCCCCAAAGAA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976042 18 - 110113093 ---GGGGGGGTCCCCAAAGAA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92702605 18 - 92844088 ---GGGGGGCTCCCCAAAGAA- i rheMac8.chr10 I 3 C 0 s macFas5.chr10 96369941 18 + 96509753 ---GGGGGGCTCCCCAAAGAA- i macFas5.chr10 I 5 I 314 s macNem1.NW_012014244v1 16839755 18 - 16982598 ---GGGGGGCTCCCCAAAGAA- i macNem1.NW_012014244v1 I 3 I 1 s cerAty1.NW_012001373v1 3643117 18 - 3785965 ---GGGGGGCTCCCCAAAGAA- i cerAty1.NW_012001373v1 I 3 C 0 s chlSab2.chr2 90264853 18 - 90373283 ---GGGGGGCTCCCCAAAGAA- i chlSab2.chr2 I 3 C 0 s colAng1.NW_012114444v1 5515256 18 - 5823884 ---GCGGGGCTCCCCAAAGAA- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168869 18 + 159171411 ---GTGGGGCTCCCCAAAGAA- i calJac3.chr5 I 7 C 0 s saiBol1.JH378156 16234591 18 + 16356641 ---GTGGGGCTCCCCAAAGAA- i saiBol1.JH378156 I 7 C 0 s cebCap1.NW_016107870v1 1101520 18 + 1231380 ---GTGGGGCTCCCCAAAGAA- i cebCap1.NW_016107870v1 I 7 C 0 s aotNan1.NW_018500483v1 2630647 18 + 11732439 ---GTGGGGCTCCCCAAAGAA- i aotNan1.NW_018500483v1 I 7 C 0 s canFam3.chr24 47565465 22 + 47698779 GCTTGGGGGCCCTGGGGACAGA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199932 312 - 397369 I e manLeu1.NW_012101652v1 21815 6790 - 179258 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=29415.000000 s hg38.chr20_KI270870v1_alt 57507 3 + 183433 GGG s panTro5.chr20 66382285 3 + 66533130 GGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063005 3 + 62195757 GGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448453 3 - 578057 GGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976060 3 - 110113093 GGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92702623 3 - 92844088 GGG i rheMac8.chr10 C 0 I 314 s macFas5.chr10 96370273 3 + 96509753 GGG i macFas5.chr10 I 314 C 0 s macNem1.NW_012014244v1 16839774 3 - 16982598 GGG i macNem1.NW_012014244v1 I 1 I 311 s cerAty1.NW_012001373v1 3643135 3 - 3785965 GGG i cerAty1.NW_012001373v1 C 0 I 305 s chlSab2.chr2 90264871 3 - 90373283 GGG i chlSab2.chr2 C 0 I 1 s colAng1.NW_012114444v1 5515274 3 - 5823884 GTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168887 3 + 159171411 GGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16234609 3 + 16356641 GGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1101538 3 + 1231380 GGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2630665 3 + 11732439 GGG i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47565487 3 + 47698779 GGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199932 312 - 397369 I e manLeu1.NW_012101652v1 21815 6790 - 179258 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=3360.000000 s hg38.chr20_KI270870v1_alt 57510 1 + 183433 T s panTro5.chr20 66382288 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063008 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448456 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976063 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012114444v1 5515277 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168890 1 + 159171411 G i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16234612 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1101541 1 + 1231380 G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2630668 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47565490 1 + 47698779 G i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e cerAty1.NW_012001373v1 3643138 305 - 3785965 I e chlSab2.chr2 90264874 1 - 90373283 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199932 312 - 397369 I e manLeu1.NW_012101652v1 21815 6790 - 179258 I e macNem1.NW_012014244v1 16839777 311 - 16982598 I e rheMac8.chr10 92702626 314 - 92844088 I e otoGar3.GL873542 22794966 2394 + 22939663 I e macFas5.chr10 96370276 0 + 96509753 C a score=3445314.000000 s hg38.chr20_KI270870v1_alt 57511 358 + 183433 CTAC-TTCTTGTCCCCTACCTCCCCACATCCGCTAAGGGCTTCTACACAAACACAGGATGAAATGAGAGGAAGGT----GGCCACCGGAACGGTGCTTAATGGCCAGGATGTTCTCTCCCTGATGTGTGCTGTTCCCATTACAGGTATTCACTTCTTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTGGAAAACCACCAAATAGAGGCAGAAATATAAAGACACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTAAT-GGTACTGGCC---------------AGGCACGGAAAGCATCCACAGACACAGCTCACAGG--TGCAGCGTGGAG s panTro5.chr20 66382289 358 + 66533130 CTAC-TTCTTGTCCCCTACCTCCCCACATCCGCTAAGGGCTTCTACACAAACACAGGATGAAATGAGAGGAAGGT----GGCCGCCGGAATGGTGCTTAATGGCCAGGATGTTCTCTCCCTGATGTGTGCTGTTCCCATTACAGGTATTCACTTCTTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTAGAAAACCACCAAATAGAGGCAGAAATATAAAGACACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTAAT-GGTACTGGCC---------------AGGCACGGAAAGCATCCACAGACACAGCTCACGGG--TGCAGCGTGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063009 358 + 62195757 CTAC-TTCTTGTCCCCTACCTCCCCACATCCGCTAAGGGCTTCTACACAAACACAGGATGAAATGAGAGGAAGGT----GGCCGCCGGAATGGTGCTTAATGGCCAGGATGTTCTCTCCCTGATGTGTGCTGTTCCCATTACAGGTATTCACTTCTTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTAGAAAACCACCAAATAGAGGCAGAAATATAAAGACACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTAAT-GGTACTGGCC---------------AGGCACGGAAAGCATCCACAGACACAGCTCACGGG--TGCAGCGTGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448457 358 - 578057 CTAC-TTCTTGTCCCCTACCTCCCCACATCCGCTAAGGGCTTCTACACAAACACAGGATGAAATGAGAGGAAGGT----GGCTGCCGGAACGGTGCTTAATGGTCAGGATGTTCTCTCCCTGATGTGTACTGTTCCCATTACAGGTATTCACTTCTTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTGGAAAACCACCAAACAGAGGCAGAAATATAAAGACACTTTGGATCATCATTTGCAGCAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTAAT-GGTACTGGCC---------------AGGCACGGAAAGCATCCACAGACACAGCTCACGGG--TGCAGCGTGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976064 358 - 110113093 CTAC-TTCTTGTCCCCTACCTCCCCAGATCCGCTAAGGGCTTCTATACAAACACAGGATGAAATGAGAGGAAGGT----GGCCGCCGGAATGGTGCTTAATGGCCAGGACGTTCTCTCCCTGATGTGTGCTGTTCCCATTACAGGTATTCACTTCTTGATGAAGCAATTTCCTATATAATGGCCCCAAATGGCAGGCTAAATGTGGAAAACCACCAAATAGAGGCAGAGATGTAAAGACACTTTGGATCATCATTTGCAGAAAGCAAAATAGCTG-CAGTCAGCTTGTGGTTGAGACACTCAGTGAT-GGTACTGGCC---------------AGGCACGGAAAGCATCCACAGACACAGCTCATGGG--TACAGCATGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92702940 375 - 92844088 CTAC-TTCTTGTCCCCTACCTCCCCAGCTTCACTGAGGGCTTCTAAACAAACACAGGATGAGATGAGAGGAAGGT----GGCCACCAGAACGGTGCTTAATGGCCAGGACGTTCTCTCCCTGATATATGCTATTCCCATTACAGGTATTCACTTCCTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTGGAAAACCACCAAATAGAGGCAGAGATATAAAGACACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTGAT-GGTACTGGCCAGGCCATGCTGGGGGAGGCACAGAAAGCATCCACAGACACAGCTCATGGGAGTGCAGCATggag i rheMac8.chr10 I 314 C 0 s macFas5.chr10 96370276 375 + 96509753 CTAC-TTCTTGTCCCCTACCTCCCCAGCTTCACTGAGGGCTTCTAAACAAACACAGGATGAGATGAGAGGAAGGT----GGCCACCAGAACGGTGCTTAATGGCCAGGACATTCTCTCCCTGATATATGCTATTCCCATTACAGGTATTCACTTCCTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTGGAAAACCACCAAATAGAGGCAGAGATATAAAGACACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTGAT-GGTACTGGCCAGGCCATGCTGGGGGAGGCACAGAAAGCATCCACAGACACAGCTCATGGGAGTGCAGCATGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840088 367 - 16982598 CTAC-TTCTTGTCCCCTACCTCCCCAGCTCCACTGAGGGCTTCTAAACAAACACAGGATGAGATGAGAGGAAGGT----GGCCACCAGAACGGTGCTTAATGGCCAGGACGTTCTCTCCCTGATATATGCTATT-CCATTACAGGTATTCACTTCCTGATGAAGCAATTTCCTATATAATGG---CACATGGCAGGCTAAATGTGGAAAACCACCAAATAGAGGCAGAGATATAAAGACAC-TTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTGAT-GGTACTGGCCAGGCCATGCT-GGGGAGGCACAGAAAGCATCCACAGACACAGCTCAT-GGAGTGCAGCATGGA- i macNem1.NW_012014244v1 I 311 C 0 s cerAty1.NW_012001373v1 3643443 375 - 3785965 CTAC-TTCTTGTCCCCTACCTCCCCAGCTCCACTGAGGGCTTCTAAACAAACACAGGATGAGATGAGAGGAAGGT----GGCCACCAGAACGGTGCTTAATGGCCAGGACGTTCTCTCCCTGATATATGCTATTCCCATTACAGGTATTCACTTCCTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTGGAAAACCACCAAATAGAGGCAGAGATATAAAGACACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTGAT-GGTACTGGCCAGGCCATGCTGGGGGAGGCACAGAAAGCATCCACAGACACAGCTCatgggggtgcagcatggag i cerAty1.NW_012001373v1 I 305 C 0 s chlSab2.chr2 90264875 375 - 90373283 CTAC-TTCTTGTCCCCTACCTCCCCAGCTCCACCGAGGGCTTCTAAACAAACACAGGATGAGATGAGAGGAAGGT----GGCCACCAGAACGGTGCTTAATGGCCAGGACGTTCTCTCCCTGATATATGCTGTTCCCATTACAGGTATTCACTTCCTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTGGAAAACCACCAAAGAGAGGCAGAGATATAGAGACACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTGAT-GGTACTGGCCAGGCCATGCTGGAGGAGGCACAGAAAGCATCCACAGACACAGCTCctgggggtgcagcgtggag i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 28605 375 - 179258 CTAC-TTCTTGTCCCCTACCTCCCCAGCTCCACTGAGGGCTTCTAGACAAACACAGGATGAGATGAGAGGAAGGT----GGCCACCAGAACGGTGCTTAATGGCCAGGACGTTCTCTCCCTGATATATGCTATTCCCATTACAGGTATTCACTTCCTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTGGAAAACCACCAAATAGAGGCAGAGATATAAAGACACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCAGTGAT-GGTACTGGCCAGGCCATGCTGGGGGAGGCACAGAAAGCATCCACAGACACAGCTCATGGGGCTGCAGCATGGAG i manLeu1.NW_012101652v1 I 6790 C 0 s colAng1.NW_012114444v1 5515278 375 - 5823884 CTAC-TTCTTGTCCCCTACCTCCCCAGCTCCACTGAGGGCTTCTAAACAAACACAGGATGAGACGAGAGGAAGGT----GGCCACCAGAATGGTGCTTAATGGCCAGGACGTTCTCTCCCTGATGTATGCTGTTCCCATTACAGGTATTCACTTCCTGATGAAGCAATTTCCTATATAATGGCCCCACATGGCAGGCTAAATGTGGAAAACCACCAAATAGAGGCAGAGATATAAAGATACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGGTTGAGACACTCACTGAT-GGTACTGGCCAGGCCATGCTGGGGGAGGCACAGAAAGCATCCACAGACACAGCTCATGGGGGTGCAGCGTGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58168891 360 + 159171411 CTACTTTTTTGCCCCCAACCTCCCCAGCTACATTGAGGGC---CATACAAACACAGGATGAGATGAGGGGAAGGT----GGCAGCTGGAA-----CCTAATGGCCAGGACGTTCTCTCCCTGATGTCTGCTGTTCCCATTGCAGGTACTCACTTCCTGATGAAGCAGTTTTCTGTATAATGGCCCCACGTGGCAGGCTAAATG--AAAAACCACCAAACGGAGGCAGAGATGTAAAGACACTTTGGATCATCATTTGCAGAAGGCAAAATAGCTG-CAGGCAGCTTGTGATTGAGA----CCGTGAT-GGGACTGGCCAGGCCATGCTGGGAGAGGCACAGAAAGCATCCACAGACACGGCTCATGGG--TGCAGTGTGGAG i calJac3.chr5 C 0 I 24 s saiBol1.JH378156 16234613 365 + 16356641 CTAC-CTTTTGCCCCCAATCACCCCAGCTCCGCTGAGGGCT--TCTAGACAAACAGGATGAGATGAGGGGAAGGT----GGCAGCTGAAACCGTGCCTAATGGCCGGGACATTCTCTCCCTGATGTGTGCTGTTCCTATTGCAGGTACTCACTTCCTGATGAAGCAGTTTTCTGTATAATGGTCCCATGTGGCAGGCTAAATG--AAAAACCACCACATAGAGGCAGAGATGTAAAGACACTTTGGATAATCATTTGCAGAAGACAAAATAGCTG-CAGGCAGCTTGTGGTTGAGA----TGGTGAT-GGGACTGGCCAAGCCATGCTGGGAGAGGCACAGAAAGCATCCACAGACACGGCTCACGGG--TGCAGCGTGGAG i saiBol1.JH378156 C 0 I 24 s cebCap1.NW_016107870v1 1101542 363 + 1231380 CTAC-TTTTTG-CCCCAACCTCCCCAGTTCCACCGAGGGCTTCTATACAAACACAGGATGAGATGAGGGGAAGGT----TGCAGGTGGAACTGT-CCTAATGGCCAGGATGTTCTCTCCCTGATGTGTGCTGTTCCCATTGCTGGTATTCACTTCCTGATGAAGCAGTTTTCTGTATAATGGCCCCACGTGGCAGGCTAAATG--AAAAACCACCAAACAGAGGCAGACA--TACAGACACTTTGGATCATCATTTGCAGAAGGCAGAATAGCTG-CAGGCAGCTTGTGGTTGAGA----CGGTAAT-GGGAATGGCCAGGCCATGCTGGGAGAGGCACAGAAAGCATCCACAGACACAGCTCACAGG--TGCAGCGTGGAG i cebCap1.NW_016107870v1 C 0 I 24 s aotNan1.NW_018500483v1 2630669 341 + 11732439 CTAC-TTTTCGTCCCCAACCTCCCCAGCTCCGCTGAGGGCTTCTGTACAAACACAGGATGAGATGAGGGGAAAGT----GGCAGCTGGAACTGTGCCTAACGGCCAGGACGT--TCTCCCTGGTGTGTGCTGTTCC-GTTGCAGGTATTCACTTCCTGATGAAGCAGTTTTCTGTATAATGGCCCCACGTGGCAGACTAAATG--AAAAACCACCAAATAGAGGCAGAGATATAAAGACACTTTGGATCAT-------------------------TAGGCAGCTTGTGGTTGAGA----CGGTGATGGGGACTGGCCAGGCCATGCTGGGAGAGGCACAGGAAGCGTCCACAGACACGGCTCACAGG--TGCAGCGTGGAG i aotNan1.NW_018500483v1 C 0 I 7 s canFam3.chr24 47565491 296 + 47698779 CTGC-TTCTTGTCCCCCCCAGCCCC-GCTCCAGCCGAGGCTCCTG--CAGACACAGGATCAGACTGGAGGAGGGCGCAAGGCTCTCAGGG-GACACCCAAGGGCCGGGA----CTTGCCCGGGAGCTCACTGTTCGCACGACAAACCTCCACTTCCTGAAGCACC----TACTGTACGACGGCCCCACAGTGCGGGATACATGC-GAAAACCA-------GAGGCCGGGG----AGGCCGACAGGGGACGTCACCTGTAGGAGGCAGCGCGGCCGCCAGGCAGCTTGAGG------------GCACC-GGGGCTGGCCGGCCCT-------------------------------CACCCCTCAC----------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199932 312 - 397369 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=107617.000000 s hg38.chr20_KI270870v1_alt 57869 12 + 183433 AATTCCAACCAG s panTro5.chr20 66382647 12 + 66533130 AATTCCAACCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063367 12 + 62195757 AATTCCAACCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448815 12 - 578057 AATTCCAAccag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976422 12 - 110113093 AATTCCAACCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703315 12 - 92844088 aactccaaccag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96370651 12 + 96509753 AACTCCAACCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840455 12 - 16982598 AACTCCAACCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3643818 12 - 3785965 aactccaaccag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265250 12 - 90373283 aactccaaccag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 28980 12 - 179258 AACTCCAACCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5515653 12 - 5823884 AACTCCAACCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169275 12 + 159171411 AACTCCAGCCAG i calJac3.chr5 I 24 C 0 s saiBol1.JH378156 16235002 12 + 16356641 AGCTCCAGCCAG i saiBol1.JH378156 I 24 C 0 s cebCap1.NW_016107870v1 1101929 12 + 1231380 AACTCCAGCCAG i cebCap1.NW_016107870v1 I 24 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47565787 0 + 47698779 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199932 312 - 397369 I e aotNan1.NW_018500483v1 2631010 7 + 11732439 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=44088.000000 s hg38.chr20_KI270870v1_alt 57881 5 + 183433 CCAAG s panTro5.chr20 66382659 5 + 66533130 CCAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063379 5 + 62195757 CCAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448827 5 - 578057 ccaag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976434 5 - 110113093 CCAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703327 5 - 92844088 ccaag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96370663 5 + 96509753 CCAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840467 4 - 16982598 CCAA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3643830 5 - 3785965 ccaag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265262 5 - 90373283 ccaag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 28992 5 - 179258 CCAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5515665 5 - 5823884 CCAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169287 5 + 159171411 CCAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235014 5 + 16356641 CCAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1101941 5 + 1231380 CCAgg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2631017 5 + 11732439 CCAGG i aotNan1.NW_018500483v1 I 7 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47565787 0 + 47698779 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199932 312 - 397369 I e otoGar3.GL873542 22794966 2394 + 22939663 I a score=23024.000000 s hg38.chr20_KI270870v1_alt 57886 2 + 183433 GG s panTro5.chr20 66382664 2 + 66533130 GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063384 2 + 62195757 GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448832 2 - 578057 gg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976439 2 - 110113093 GG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703332 2 - 92844088 gg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96370668 2 + 96509753 GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840471 1 - 16982598 -G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3643835 2 - 3785965 gg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265267 2 - 90373283 gg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 28997 2 - 179258 GG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5515670 2 - 5823884 GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169292 2 + 159171411 GG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235019 2 + 16356641 GG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1101946 2 + 1231380 gg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2631022 2 + 11732439 GG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22797360 2 + 22939663 GA i otoGar3.GL873542 I 2394 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47565787 0 + 47698779 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I e dasNov3.JH569290 199932 312 - 397369 I a score=2720921.000000 s hg38.chr20_KI270870v1_alt 57888 285 + 183433 GCCCAGGCAGGCCTCC-GAGGAAGGACGCTTGACCTGAGACTTCCCCCTTA-TCATGGTCAAAGTGAGGGTGTCCCTGCTGGAGCC-----CCTGCAAAGGCCCGAGGGAGCCGGGACCTTAG-------A-------GTCTG-GGGACTGCATACAGCCCACTTTGAGGAAGCCTTCTTGGTTTGAGGAGGGGGTTGAAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAGCGGGGTGAGG--------GG-CTCCACCTTGACTCAACTCCCTAGATGGCAAC-TGATGGGGGCTGGTCTAGA s panTro5.chr20 66382666 284 + 66533130 GCCCAGGCAGGCCTCC-GAGGAAGGACGCTTGACCTGAGACTTCCCCCTTA-TCATGGTCAAAGTGAGGGTGTCCCTGCTGGAGCC-----CCTGCAAAGGCCCAAGGGAGCCGGGACCTTGG-------A-------GTCTG-GGGATTGCATACAGCCCACTTTGAGGAAGCCTTCTTGGTT-GAGGAGGGGGTTGTAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAGCGGGGTGAGG--------GG-CTCCACCTTGACTCAACTCCCTAGATGGCAGC-TGACGGGGGCTGGTCTAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063386 284 + 62195757 GCCCAGGCAGGCCTCC-GAGGAAGGACGCTTGACCTGAGACTTCCCCCTTA-TCATGGTCAAAGTGAGGGTGTCCCTGCTGGAGCC-----CCTGCAAAGGCCCAAGGGAGCCGGGACCTTGG-------A-------GTCTG-GGGATTGCATACAGCCCACTTTGAGGAAGCCTTCTTGGTT-GAGGAGGGGGTTGTAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAGCGGGGTGAGG--------GG-CTCCACCTTGACTCAACTCCCTAGATGGCAGC-TGACGGGGGCTGGTCTAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 448834 285 - 578057 gctcaggcaggcctcc-gaggaaggacgcttgacctgagacttCCCCCTTA-TCATGGTCAAAGTGAGGGTGTCCCTGCTGGAGCC-----CCTGCAAAGGCCCGAGGGAGCCGGGACCTTGG-------A-------GTCTG-GGGACTGCATACAGCCCACTTTGAGGAAGCCTTCTTGGTTTGAGGAGGGGGTTGAAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAGCGGGGTGAGG--------GG-CTCCACCTTGACTCAACTCCCTAGATGGCAGC-TGATGGGGGCTGGCCTAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976441 285 - 110113093 GCCCAGGCAGGCCTCC-GAGGAAGGATACTTGACCTGAGACTTCCCCCTTAGTCACGGTCAAAATGAGGGTGTCCCTGCTGGAGCA-----CCTGCAAAGGCCCAAGGGAGCTGGGACCTTGG-------A-------GTCTG-GGGATTGCATACAGCCCACTTTGAGGAAG-CTTCTTGGTTTGAGGAGGGGGTTGTAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAGTGCGGTGAGG--------GG-CTCCACCTTGACTCAGCTCCCTAGATGGCAGC-TGATGGGAGCTGGTCTAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703334 290 - 92844088 gcccaggcagtcctcc-gaggaatgatgcttgacctgagactttccccttagtcatggtcaaagtgagggtgtccctgctggagccagca-cctgcaaaggcccaagggagctgggaccttgg-------a-------gtctg-aggattgcataaagcccagtttgAGGAAGCTTTCTTTGTTTGAGGAGGGGGTTGTAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGGAA------GTGGAGACCAGCGGGGTGAGG--------GG-CTCCACCTTGGCTCAACTCCCTAGATGGCAGC-CGATGGGGGCTGGTCTAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96370670 290 + 96509753 GCCCAGGCAGTCCTCC-GAGGAATGATGCTTGACCTGAGACTTTCCCCTTAGTCATGGTCAAAGTGAGGGTGTCCCTGCTGGAGCCAGCA-CCTGCAAAGGCCCAAGGGAGCTGGGACCTTGG-------A-------GTCTG-AGGATTGCATAAAGCCCAGTTTGAGGAAGCTTTCTTTGTTTGAGGAGGGGGTTGTAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGGAA------GTGGAGACCAGCGGGGTGAGG--------GG-CTCCACCTTGGCTCAACTCCCTAGATGGCAGC-CGATGGGGGCTGGTCTAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840472 282 - 16982598 GCCCAGGCAGTCCTCC-AGAGAATGATGCTTGA-CTGAGACTTTCCCC-TAGTCATGGTCAAAGTGAGGGTGTCCCTGCTGGAGC--GCAGCCTGCAAAGG-CCAAGGGAGCTGGGA-CTTGG-------A-------GTCTG-AAGATTGCGTAAAGCCCAGTTTGAGGAAGCTTTCTTTGTTTGAGGAGGGGGTTG-AGTGCAGC--ATCATGGACCCTGGG-TGAGAAGGAG------GTGGAGACCA--GGGGTGAGG--------GGCCTCCACCTTGGCTCAACTCCCTAGATGGCAGC-CGATGGGGGCTGGTCTAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3643837 290 - 3785965 gcccaggcagtcctcc-gaggaatgatgcttgacctgagactttccctttagtcatggtcaaagtgagggtgtccctgctggagccagca-cctgcaaaggcccaagggagctgggaccttgg-------a-------gtctg-aggattgcataaagcccagtttgaggaagctttctttgtttgaggagggggttgtaggGCAGC--ATCATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAGCGGGGTGAGG--------AG-CTCCACCTTGGCTCAACTCCCTAGATGGCAGC-CGATGGGGGCTGGTCTAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265269 290 - 90373283 gcccaggcagtcctcc-gaggaatgatgcttgacctgagactttcccctcagtcatggtcaaagtgagggtgtccctgctggagccagca-cctgcaaaggcccaagggagctgggaccttgg-------a-------gtctg-aggattgcataaagcccagtttgAGGAAGTTTTCTTTGTTTGAGGAGGGGGTTGTAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAGCGGGGTGAGG--------GG-CTCCACCTTGGCTCAACTCCCTAGATGGCAGC-CGATGGGGGCTGGTCTAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 28999 290 - 179258 GCCCTGGCAGTCCTCC-GAGGAATGATGCTTGACCTGAGACTTTCCCTTTAGTCATGGTCAAAGTGAGGGTGTCCCTGCTGGAGCCAGCA-CCTGCAAAGGCCCAAGGGAGCTGGGACCTTGG-------A-------GTCTG-AGGATTGCATAAAGCCCAGTTTGAGGAAGCTTTCTTTGTTTGAGGAGGGGGTTGTAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGAAG------GTGGAGACCAGCGGGGTGAGG--------GG-CTCCACCTTGGCTCAACTCCCTAGATGGCAGC-CGATGGGGGCTGGTCTAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5515672 290 - 5823884 GCCCAGGCAGTCCTCC-GAGGATTGATGCTTGACCTGAGACTTTCCCCTTAGTCATGGTCCAAGTGAGGGTGTCCCTGCTGGAGCCAGCA-CCTGCAAAGGCCCAAGGGAGCTGGGACCTTGG-------A-------GTCTG-GGGATTGCATAAAGCCCATTTTGAGGAAGCTTTCTTTGTTTGAGGAGGGGGTTGTAGGGCAGC--ATCATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAGCGGGGTGAGG--------GG-CTCCACCTTGGCTCAACTCCGTGGATGGCAGC-CGATGGGGGCTGGTCTAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169294 291 + 159171411 GCTCAGGCAGGCCTCT-GAGGAAGGACGCTTGGCCTGAGACTTTCTGCTTAGTCACGATCAAAGTGAGGGTGTCCCTGCTGGGGCCAGCA-CCTTCAAAGGCCCAAAGGAGCTGGGACCTTGG-------A-------GTCTAGGGGGATGCAGACAGCCTGCTTTGAGGAAGACTTCTTGGCCTAAGGAGGGGGTTGTGGGGCAGC--ATGATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAGCGGGGCAAGG--------GG-ATCTACGTCGCATCAGGTTCTTAGATGGCACA-TGAAGGGGGCTCGTTTTCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235021 290 + 16356641 GCCCAGGCAGGCCTCT-GAGGAAGGACGCTTGACCTGAGACTTTCTGCTTAGTCACGGTCAAAGTGAGGTTTTCCCTGCTGGGGCCAGCA-CCTTCAAAAGCCCAAAGGAGCTGGGACCTTGG-------A-------GTCTA-GGGGATGCAGACAGCCTGCTTTGAGGAAGACTTCTTGGCTTAAGGAGGGGGTTGTAGGGCAGC--ATGATGGACCCTAGGTTGAGAAGGAG------GTGGAGGATAGCGGGGTGTGG--------GG-CCCTACCTTGGCTCAGCTCTCTAGATGGCAGC-TGATGGGGGCTTGTCTACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1101948 289 + 1231380 gcccaggcaggcctct-gaggaaggacacttgacctgagactttctgcttagtcacggtcaaagtgagggtgtccctgctggggccagca-ccttcaaaggcccaaagaagctgggaccttgg-------a-------gtcta-ggggatgcagatagcctgctttgacgaagcctgcttggcctaaggagggggttgtaggGCAGC--ATGATGGACCCTGGGTTGAGAAGGAG------GTGGAGACCAACAGGGTGTGG--------GG-CTCCACCTTGGCTCAGCTTCCTAGATGGCAGC-TGAT-GGGGCTTGTCTACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2631024 288 + 11732439 GCCCAGGCAGGCCTCT-GAGGAAGGACGCTTGACCTGAGACTTTCTGCTTAGTCACGGTCAAAGTGAGGGTGTCCCTGCTGGGGCCAGCA-CCTTCAAAAGCCCAAAGGAGCTGGGACCTTGG-------A-------GTCTA-GGGGGTGCAGACAGCCTGTTTTGAGGAAGACTTCTTGGCCTAAGGAGGGGGTT-TAGGGCAGC--AGGATGGA-CCTGGGTTGAGAAGGAG------GTGGAGACCAGCAGGGTGTGG--------GA-CTCTACCTCGGCTCAGCTCCCGAGATGGCAGC-TGATGGGGGCTTGTCTACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22797362 301 + 22939663 GCCCCAACTGGCCTGTGGAGGACCAACCCTTGAGCTGAGATTGTTTCCTCAGTGACAGGCA-----AGAGGGTCCCTGCTGGGGCCAGCA-CCTACAAAAGCACACAGGAGTACAGACCTCAGCAACCGTG-------GTCCA-GGGA-TGCTCAAGGCCCAC-TTGAGGAAGGCTCCATGGTCTGAGGAGGAGA-TGCAGGGCAGT--ATAATGGG-CTGGGGATGAGAGggagactagtgaggagactagtgaggCAGGGATCCCGTTGG-TCTCATCTGGGTGC-GCACGTTAAATGGCAGC-TGAT-GGGGCTAGTTTATG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47565787 221 + 47698779 -CCCGTGCCTGGCGCC-CACGGCAGAGGCCTGAGCAGGGCACCCACACGCA---------------------CCACAGCTGGGACAAGGT-GCAGGGGTGGCGGGGGAGGGCAGGAGCCCCAG-------G-------GT----GGCGCGGCG--CGGCCCGCCTCTGGGCAG-----------------GGAGACAGTCGGCTCGCCAGGCGTGCGCCCCTGG---------AG------GTGAGCGCCCCTGGAGGTGAG--------CG-C-----------------CCCTGGACGTGAGCTTGCCGGCGGCTGGCGGA-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 200244 241 - 397369 GCTCAGCGGGGCCTG--GAGGA---ACGCTCGCCCTTGGGCCTC------------------GAGGGGAGCTGCTCTGCCGGGGCCTGCT-CCCGCGCAGGCTGGGGGGGCCCGAGAGTCGAG-------AAGGCCCGGTGTG-GGGACCCCA--GTGGCCACTGCAGGGAGG--GTCTTAGTCTGAGTGGGGGGAGGTAGGGCAAA-----GTGGCCCCTGGGT--------GG------GTGGTGAAC-----GGCCAGA--------GC-CCACACC-----------CACCA---GGCTGG-TGGAAGGGGCTTGTGCCGC i dasNov3.JH569290 I 312 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56809156 912 + 57149010 I a score=241914.000000 s hg38.chr20_KI270870v1_alt 58173 21 + 183433 GGGCTCT--CTCCTAGGTGAGGG s panTro5.chr20 66382950 21 + 66533130 GGGCTCT--CTCCTAGGTGAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063670 21 + 62195757 GGGCTCT--CTCCTAGGTGAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449119 21 - 578057 GGGCTCT--CTCCTAGGTGAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976726 21 - 110113093 GGGCTGT--CTCCTAGGTGAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703624 21 - 92844088 GGGCTCT--CTCCTAGGTGAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96370960 21 + 96509753 GGGCTCT--CTCCTAGGTGAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840754 19 - 16982598 GGGCTCT--CCCCAGGGTGA--G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644127 21 - 3785965 GGGCTCT--CTCCTAGGTGAGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265559 21 - 90373283 GGGCTCT--CTCCTAGGTGAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29289 21 - 179258 GGGCTCT--CTCCTAGGTGAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5515962 21 - 5823884 GGGCTCT--CTCCTAGGTGAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169585 21 + 159171411 GGACTGT--ATCATGGGTGACAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235311 21 + 16356641 GGACTCT--CTCATGGGTGACGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1102237 21 + 1231380 AGACTCT--CCCATGGGTGACAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2631312 21 + 11732439 GGACTCC--CTCATGGGTGACAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56810068 21 + 57149010 GGGCTCT--CTTGTGGGTGACGG i micMur3.chr18 I 912 C 0 s otoGar3.GL873542 22797663 21 + 22939663 GGGGTCT--CCCATGGGTGAGGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47566008 22 + 47698779 GGGCCCTGGCCCCCAGG-GAGGG i canFam3.chr24 C 0 I 88 s dasNov3.JH569290 200485 21 - 397369 GGGCTTG--CGCACGGGTGAGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181753345 1727 + 182113224 I a score=534328.000000 s hg38.chr20_KI270870v1_alt 58194 54 + 183433 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCCTAGTCCCCTTCATGGGGACAG s panTro5.chr20 66382971 54 + 66533130 GCTAGACCTGAAGCTCCTGTGCTTCCTCAGCCCTAGTCCCCTTCATGGGGACAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063691 54 + 62195757 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCCTAGTCCCCTTCATGGGGACAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449140 53 - 578057 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCCTAGTCCCC-TCATGGGGACAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976747 54 - 110113093 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCCTAGTCCCCTTCATGGGGACAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703645 54 - 92844088 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCCGAGTCCTGTTCATGGGGGCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96370981 54 + 96509753 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCCGAGTCCTGTTCATGGGGGCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840773 53 - 16982598 GCTAGACCTGAAGCTC-TGTGCTTCCTCAGCCCGAGTCCTGTTCATGGGGGCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644148 54 - 3785965 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCCGAGTCCCGTTCATGGGGGCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265580 54 - 90373283 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCCGAGTCCCCTTCATGGGGGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29310 54 - 179258 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCCGAGTCCCGTTCATGGGGGCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5515983 54 - 5823884 GCTAGACCTGAAGCTCTTGTGCTTCCTCAGCCTGAGTCCCCTTCATGGGGGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169606 40 + 159171411 CGTAGAC--------------CTTTCTCAGCACGAGTTCCATTCACGGGGGCAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235332 40 + 16356641 CCTAGAC--------------CTTCCTCAGCCTGAGTTCCCTTTGTGGGGGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1102258 40 + 1231380 CCTAGAC--------------CTTCCGCAGCCTGAGTTCCCTTCGTGGGGGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2631333 40 + 11732439 CCTAGAC--------------CTTCCTCAGCCTGAGTTCCCTTTGTGGGGGCAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56810089 54 + 57149010 GCTCGACCTGAAGTTCCTGTGCTTCTTCAGTCCCAGTGCCCGTCATGGGGGCAG i micMur3.chr18 C 0 I 43 s otoGar3.GL873542 22797684 54 + 22939663 GCTGGACCTGGAGCTCTTGCACTTCCCCAGCTGCAGGCCCCACCATGGAGGCAA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 200506 54 - 397369 GCTGCATGCGCGGCTCTTGTGCTTCCTGCGGCCTGATCCCCGCTGTGGGGGCAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I a score=554616.000000 s hg38.chr20_KI270870v1_alt 58248 63 + 183433 GAATGG--TGTGTGATGGTGCATTCATAGATGTGCATGCACAC----------------ATACAGGCATGTACATTTGTAC s panTro5.chr20 66383025 63 + 66533130 GAATGG--TGTGTGATGGTGCATTCATAGATGTGCATGCACAC----------------ATACAGGCATGTACATTTGTAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063745 63 + 62195757 GAATGG--TGTGTGATGGTGCATTCATAGATGTGCATGCACAC----------------ATACAGGCATGTACATTTGTAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449193 63 - 578057 GAATGG--TGTGTGATGGTGCATTCAtagatgtgcatggacac----------------atacaggcatgtacatttgtac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976801 63 - 110113093 GAATGG--TGTGTGATGGTGCATTCATAGATGTGCATGCGCAC----------------ATACAGGCATGTACATTTGTAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703699 61 - 92844088 GAATGG--TGTGTGATAGTGCATTCATAGATGTGCATGCACAC----------------AC--AGAGATGTACATTTGTAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371035 61 + 96509753 GAATGG--TGTGTGATGGTGCATTCATAGATGTGCATGCACAC----------------AC--AGAGATGTACATTTGTAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840826 64 - 16982598 GAATGGGTGGTGTGATGGTGCATTCATAGATGTGCATGCACAC----------------ACA-AGACATGTACATTTGTAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644202 63 - 3785965 GAATGG--TGTGTGATGGTGCATTCATAGATGAGCATGCACAC----------------ACAGAGACATGTACATTTGTAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265634 63 - 90373283 GAATGG--TGTGTGATGGTGCATTCATAGATGTGCATGCACAC----------------ACAGAGACATGTACCTTTGTAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29364 79 - 179258 GAATGG--TGTGTGATGGTGCATTCATAGATGTGCATGCACACACAGAGACATGTACATACAGAGACATGTACATTTGTAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516037 63 - 5823884 GAATGG--TGTGTGATGGTGCATTCATAGATGTGCATGCACAC----------------ACAGAGACATGTACATTTGTAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169646 60 + 159171411 GAACAA--GGTGGGATGGTGCATTCACAGATGGGCATGCACAC----------------AC--AGGCATTTTCA-TAGAAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235372 61 + 16356641 GAATGG--CGTGTGATGGTGCATTcacagatgtgcatgcacac----------------ac--aggcatttacatttgtac i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1102298 61 + 1231380 GAATGG--CGTGTGATGGTGCATTCACAGATGTGCATGCACAC----------------AC--AGGCATTTATATTTGTAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2631373 61 + 11732439 GAATGG--CGTGTGATGGTGCATTCACAGATGTGCATGCACGC----------------AC--AGGCTGTTACATTTGTAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22797738 42 + 22939663 GAGTGG--TGTGTGTTG-------------TGTACTTGCAGGC----------------ATGCAGTCTTGTAT-------- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 200560 49 - 397369 GAGTGG--TGTGTG------CACACACAGACAAGCACACGCAC----------------AT--GTGCACACACGC------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810143 43 + 57149010 I a score=105573.000000 s hg38.chr20_KI270870v1_alt 58311 7 + 183433 ACAGACA s panTro5.chr20 66383088 7 + 66533130 ACAGACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063808 7 + 62195757 ACAGACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449256 7 - 578057 acagaca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976864 7 - 110113093 ACAGACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703760 7 - 92844088 ACAGACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371096 7 + 96509753 ACAGACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840890 7 - 16982598 ACAGACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644265 7 - 3785965 ACAGACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265697 7 - 90373283 ACAGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29443 7 - 179258 ACAGACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516100 7 - 5823884 ACAGACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169706 7 + 159171411 ACAGACA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235433 7 + 16356641 acagaca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1102359 7 + 1231380 ACAGACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2631434 7 + 11732439 ACAGACA i aotNan1.NW_018500483v1 C 0 I 23 s micMur3.chr18 56810186 7 + 57149010 ACAGACA i micMur3.chr18 I 43 C 0 s otoGar3.GL873542 22797780 7 + 22939663 GCAGACA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 200609 7 - 397369 CCAGACG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I a score=54560.000000 s hg38.chr20_KI270870v1_alt 58318 6 + 183433 TGC-A--CA s panTro5.chr20 66383095 6 + 66533130 TGC-A--CA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063815 6 + 62195757 TGC-A--CA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449263 6 - 578057 tgc-a--ca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976871 6 - 110113093 TGC-A--CA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703767 6 - 92844088 TGC-A--CA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371103 6 + 96509753 TGC-A--CA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840897 7 - 16982598 TGCAA--CA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644272 6 - 3785965 TGC-A--TA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265704 6 - 90373283 TGC-A--CA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29450 6 - 179258 TGC-A--CA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516107 6 - 5823884 TAC-A--CA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169713 6 + 159171411 AGC-A--CA i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16235440 6 + 16356641 agc-a--ca i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1102366 6 + 1231380 AGC-A--CA i cebCap1.NW_016107870v1 C 0 I 490 s micMur3.chr18 56810193 6 + 57149010 TGC-G--CA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22797787 6 + 22939663 TGC-A--CA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 200616 8 - 397369 TGC-GGCCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e aotNan1.NW_018500483v1 2631441 23 + 11732439 I a score=105458.000000 s hg38.chr20_KI270870v1_alt 58324 16 + 183433 CAGAAATGTGCATGCA s panTro5.chr20 66383101 16 + 66533130 CAGAAATGTGCATGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063821 16 + 62195757 CAGAAATGTGCATGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449269 16 - 578057 cagaaatgtgcatgCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976877 16 - 110113093 CAGAAATGTGCATGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703773 16 - 92844088 TAGAAATGTGCACGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371109 16 + 96509753 TAGAAATGTGCACGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840904 16 - 16982598 TAGAAATGTGCATGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644278 16 - 3785965 TAGAAATGTGCATGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265710 16 - 90373283 TAGAAATGTGCATGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29456 16 - 179258 TAGAAATGTGCATGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516113 16 - 5823884 CAGAAATGTGCATGCA i colAng1.NW_012114444v1 C 0 C 0 s micMur3.chr18 56810199 16 + 57149010 TAGAAATGTGCATGCA i micMur3.chr18 C 0 I 7534 s otoGar3.GL873542 22797793 16 + 22939663 TCTGCACTCGCAGGCT i otoGar3.GL873542 C 0 I 6 s dasNov3.JH569290 200624 14 - 397369 CACAGTCGTGAATG-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e saiBol1.JH378156 16235446 1 + 16356641 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169719 1 + 159171411 I e aotNan1.NW_018500483v1 2631441 23 + 11732439 I a score=110246.000000 s hg38.chr20_KI270870v1_alt 58340 21 + 183433 TAGGCCCACACA--GCAGACAGG s panTro5.chr20 66383117 21 + 66533130 TAGGCCCACACA--GCAGACAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063837 21 + 62195757 TAGGCCCACACA--GCAGACAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449285 21 - 578057 TAGGCCcacaca--gcagacagg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976893 21 - 110113093 TAGGCCCACACA--GCAGACAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703789 21 - 92844088 TAGGCCCACACA--ACAGACAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371125 21 + 96509753 TAGGCCCACACA--ACAGACAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840920 20 - 16982598 TAGGCCCACAC---ACAGACAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644294 21 - 3785965 TAGGCCCACACA--ACAGACAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265726 21 - 90373283 TAGGCCCACACA--ACAGACAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29472 21 - 179258 TAGGCCCACACA--ACAGACAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516129 21 - 5823884 TAGGCCCACACA--ACAGACAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169720 8 + 159171411 ---------------CAGACGGG i calJac3.chr5 I 1 I 7 s saiBol1.JH378156 16235447 8 + 16356641 ---------------cagacagg i saiBol1.JH378156 I 1 I 8 s otoGar3.GL873542 22797815 21 + 22939663 TAGGCCCACACATGGTGTGca-- i otoGar3.GL873542 I 6 C 0 s dasNov3.JH569290 200638 6 - 397369 ----------------ACACAG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631441 23 + 11732439 I a score=264420.000000 s hg38.chr20_KI270870v1_alt 58361 31 + 183433 CACATGCACACAGGTGTGTACACAGAGATGC- s panTro5.chr20 66383138 31 + 66533130 CACATGCACACAGGTGTGTacacagagatgc- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063858 31 + 62195757 CACATGCACACAGGTGTGTACACAGAGATGC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449306 31 - 578057 cacatgcacacaggtgtgtacacagagaggc- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976914 31 - 110113093 CACATGCACACCGGTGTTTacacagagatgc- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703810 31 - 92844088 CAAATGCACACAGGTGTGTACACGGagatgc- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371146 31 + 96509753 CAAATGCACACAGGTGTGTACACGGAGatgc- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16840940 31 - 16982598 CAAATGCACACAGGTGTGTACACGGAGATTc- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644315 31 - 3785965 CAAATGCACACAGGTGTGTACACGGAGATGC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265747 31 - 90373283 CAAATGCACACAGGTGTGTACACGGAGATGC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29493 31 - 179258 CAAATGCACACAGGTGTGTACACGGagatgc- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516150 31 - 5823884 CAAATGCACACAGATGTGTACACGGAGATGC- i colAng1.NW_012114444v1 C 0 I 2 s calJac3.chr5 58169735 31 + 159171411 CACATGTACATAGGTGTGTGCGCAGAGATGC- i calJac3.chr5 I 7 C 0 s saiBol1.JH378156 16235463 31 + 16356641 cacgtgtacataggtgtgtgcgcagagatgc- i saiBol1.JH378156 I 8 C 0 s aotNan1.NW_018500483v1 2631464 31 + 11732439 CACATGTACATAGGTGTATGCGCAGAGATGC- i aotNan1.NW_018500483v1 I 23 C 0 s otoGar3.GL873542 22797836 23 + 22939663 cacacccatacaggtgggcacat--------- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 200644 31 - 397369 -ATGTACATGCGGTTGTGCACTCAGGCAAGAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I a score=7513.000000 s hg38.chr20_KI270870v1_alt 58392 1 + 183433 A s panTro5.chr20 66383169 1 + 66533130 a i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063889 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449337 1 - 578057 a i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976945 1 - 110113093 a i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703841 1 - 92844088 a i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96371177 1 + 96509753 a i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16840971 1 - 16982598 a i macNem1.NW_012014244v1 C 0 I 852 s cerAty1.NW_012001373v1 3644346 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 I 2 s chlSab2.chr2 90265778 1 - 90373283 A i chlSab2.chr2 C 0 I 2 s manLeu1.NW_012101652v1 29524 1 - 179258 a i manLeu1.NW_012101652v1 C 0 I 2 s calJac3.chr5 58169766 1 + 159171411 A i calJac3.chr5 C 0 I 2 s saiBol1.JH378156 16235494 1 + 16356641 a i saiBol1.JH378156 C 0 I 2 s aotNan1.NW_018500483v1 2631495 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 I 2 s otoGar3.GL873542 22797859 1 + 22939663 g i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 200675 1 - 397369 A i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I a score=161202.000000 s hg38.chr20_KI270870v1_alt 58393 22 + 183433 CACACACGT--ACACACAGATGTG-- s panTro5.chr20 66383170 22 + 66533130 cacacacat--acacacagatgtg-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063890 22 + 62195757 CACACACAT--ACACACAGATGTG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449338 24 - 578057 cgcgcacatgcacacacagatgtg-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976946 22 - 110113093 cacacacgt--acacacagatgtg-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703844 22 - 92844088 cacacatgc--acacacagatgtg-- i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96371180 22 + 96509753 cacacatgc--acacacagatgtg-- i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16841824 22 - 16982598 cacacatgc--acacacagatgtg-- i macNem1.NW_012014244v1 I 852 C 0 s cerAty1.NW_012001373v1 3644349 22 - 3785965 CATACatgc--acacacagatgtg-- i cerAty1.NW_012001373v1 I 2 C 0 s chlSab2.chr2 90265781 22 - 90373283 CACACATGT--ACACACAGATGTG-- i chlSab2.chr2 I 2 C 0 s manLeu1.NW_012101652v1 29527 22 - 179258 cacacatgc--acacacagatgtg-- i manLeu1.NW_012101652v1 I 2 C 0 s calJac3.chr5 58169769 20 + 159171411 CACACATGG--A--CAGAAATGGG-- i calJac3.chr5 I 2 C 0 s saiBol1.JH378156 16235497 22 + 16356641 cacacaggt--acgcacagatgtg-- i saiBol1.JH378156 I 2 C 0 s aotNan1.NW_018500483v1 2631498 22 + 11732439 CACACAGGT--ACGCACAGATGTG-- i aotNan1.NW_018500483v1 I 2 I 1254 s otoGar3.GL873542 22797860 22 + 22939663 cacacaggc--acacacaggtgtg-- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 200676 22 - 397369 --CACGTGG--GTATGCATGTGTGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I a score=29992.000000 s hg38.chr20_KI270870v1_alt 58415 21 + 183433 TACGCAGAGAGGC----ACGCACAT s panTro5.chr20 66383192 23 + 66533130 tacacagagaggcg--cacacacat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063912 23 + 62195757 TACACAGAGAGGCG--CACACACAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449362 21 - 578057 tacacagagaggc----acgcacat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976968 21 - 110113093 tacacagagatac----atgcacat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703866 21 - 92844088 tacac--agatgca--cacacacat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371202 21 + 96509753 tacac--agatgca--cacacactt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16841846 21 - 16982598 tacac--agatgca--cgcacacat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644371 23 - 3785965 aacacagagatgca--cgcacacat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265803 23 - 90373283 TACACAGAGATGCA--cacacacac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29549 23 - 179258 tacacagagatgca--cacacacat i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58169789 5 + 159171411 CATTC-------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235519 23 + 16356641 catgcacacatgga--cagaaatgg i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22797882 25 + 22939663 cacacatgaacacaggcaggcacac i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 200698 21 - 397369 TAGTCACACAGGCA--CGGGCAG-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566030 88 + 47698779 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I a score=50058.000000 s hg38.chr20_KI270870v1_alt 58436 13 + 183433 TCACA---CACAGATG s panTro5.chr20 66383215 13 + 66533130 gcaca---cacagatg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063935 13 + 62195757 GCACA---CACAGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449383 13 - 578057 gcaca---cacagatg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109976989 13 - 110113093 atgca---cacagatg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703887 13 - 92844088 gcaca---cacagatg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371223 13 + 96509753 gcaca---cacaggtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16841867 13 - 16982598 gcaca---cacagatg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644394 13 - 3785965 gcaca---cacaggtg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265826 13 - 90373283 atgca---cacacatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29572 13 - 179258 gcaca---cacaggtg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58169794 3 + 159171411 ---------Aca---- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235542 9 + 16356641 gcatt---caca---- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22797907 13 + 22939663 acatg---cacagagg i otoGar3.GL873542 C 0 I 2 s canFam3.chr24 47566118 13 + 47698779 TGGTG---CGCAGACG i canFam3.chr24 I 88 C 0 s dasNov3.JH569290 200719 16 - 397369 GCGCATGGCACGTGTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I a score=27576.000000 s hg38.chr20_KI270870v1_alt 58449 18 + 183433 -------TGTACACAGAGA----GGCACA s panTro5.chr20 66383228 16 + 66533130 -------tgtacacagag------gcacg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063948 18 + 62195757 -------TGTACACAGAGA----GGCACG i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109977002 18 - 110113093 -------tgtacacagaga----tgcaca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92703900 16 - 92844088 -------tgtacac--aga----tgcaca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371236 16 + 96509753 -------tgtacac--aga----tgcacg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16841880 18 - 16982598 -------tgtacacagaga----tgcacg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644407 16 - 3785965 -------tgtacac--aga----tgcatg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265839 18 - 90373283 -------tgaacacagaga----tgcaca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 29585 16 - 179258 -------tgtacacagaga----tg--ca i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58169797 18 + 159171411 -------tgcacacagaca----tgcaca i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235551 18 + 16356641 -------tgcaaacagaca----tgcaca i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22797922 22 + 22939663 -------ggcacacacagatctgtgcaca i otoGar3.GL873542 I 2 I 2 s canFam3.chr24 47566131 10 + 47698779 -------TGAGTGAGGA------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 200735 18 - 397369 CGGCCCTTGTGAGCTGCG----------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I a score=91712.000000 s hg38.chr20_KI270870v1_alt 58467 33 + 183433 CGCA----CATACACA---CACAGATGTGTACACAGAGAG s panTro5.chr20 66383244 33 + 66533130 cgca----catgcaca---cacagatgTGTACACAGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063966 33 + 62195757 TGCA----CATGCACA---CACAGATGTGTACACAGAGAG i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92703916 33 - 92844088 caca----catgcaca---cacaggtgtgtacacggagat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371252 37 + 96509753 cacacatgcatgcaca---cacagatgtgtacacggagat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16841898 31 - 16982598 caca----catgcaca---cacaggtgtgtacac--agat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644423 33 - 3785965 caca----catgcaca---cacagatgtgtacacagagat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265857 33 - 90373283 caca----catgcaca---cacagatgtgtacacagagat i chlSab2.chr2 C 0 T 137 s manLeu1.NW_012101652v1 29601 33 - 179258 cgca----catgcaca---cacagatgtgaacacagagat i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58169815 31 + 159171411 --ca----tgaacact---cacagacaagtgcacgcagac i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16235569 31 + 16356641 --tg----tggacact---cacagacacgtgcacgcagac i saiBol1.JH378156 C 0 I 2 s otoGar3.GL873542 22797946 33 + 22939663 tgca----catgggca---ggcatatacgcacacacaggt i otoGar3.GL873542 I 2 C 0 s canFam3.chr24 47566141 15 + 47698779 -------------------CGCAGCT----ACACGGGA-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 200753 30 - 397369 ----------TGCGCACGGCACGCGTGCGGCCCTTGTGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e nomLeu3.chr13 109977020 0 - 110113093 C a score=46976.000000 s hg38.chr20_KI270870v1_alt 58500 15 + 183433 --GCACGCGCACATGCA s panTro5.chr20 66383277 15 + 66533130 --GCACATGCACATACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62063999 15 + 62195757 --GCACACGCACATACA i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92703949 15 - 92844088 --gcacgcacacatgca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371289 15 + 96509753 --gcacgcacacatgca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16841929 15 - 16982598 --gcacgcacacatgca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644456 15 - 3785965 --gcacgcacacatgca i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 29634 15 - 179258 --gcatgcacacatgca i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58169847 12 + 159171411 -----tgcacacgtgga i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16235602 15 + 16356641 --acttgcacacatgga i saiBol1.JH378156 I 2 C 0 s otoGar3.GL873542 22797979 15 + 22939663 --gggcacacacatgca i otoGar3.GL873542 C 0 I 1560 s canFam3.chr24 47566156 12 + 47698779 --GCACGCACAGAT--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 200783 14 - 397369 CTGCGTGTGCACGG--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e chlSab2.chr2 90265890 137 - 90373283 T e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e nomLeu3.chr13 109977020 0 - 110113093 C a score=19333.000000 s hg38.chr20_KI270870v1_alt 58515 5 + 183433 CACAC s panTro5.chr20 66383292 5 + 66533130 CACAC i panTro5.chr20 C 0 I 4 s panPan2.chr20 62064014 5 + 62195757 CACAC i panPan2.chr20 C 0 I 4 s rheMac8.chr10 92703964 5 - 92844088 cacac i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96371304 5 + 96509753 cacac i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16841944 5 - 16982598 cacac i macNem1.NW_012014244v1 C 0 I 2 s cerAty1.NW_012001373v1 3644471 5 - 3785965 cacac i cerAty1.NW_012001373v1 C 0 I 2 s manLeu1.NW_012101652v1 29649 5 - 179258 cacac i manLeu1.NW_012101652v1 C 0 T 5821 s calJac3.chr5 58169859 5 + 159171411 cattc i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235617 5 + 16356641 cattc i saiBol1.JH378156 C 0 C 0 s dasNov3.JH569290 200797 5 - 397369 CACGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566168 0 + 47698779 C e colAng1.NW_012114444v1 5516181 2 - 5823884 I e chlSab2.chr2 90265890 137 - 90373283 T e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e nomLeu3.chr13 109977020 0 - 110113093 C e otoGar3.GL873542 22797994 1560 + 22939663 I a score=67738.000000 s hg38.chr20_KI270870v1_alt 58520 48 + 183433 GTGTA-----CACAGAGAGGCACGCGCACATGCACACAGATGTGTACACAG--AG s panTro5.chr20 66383301 48 + 66533130 GTGTA-----CACAGAGAGGCACGCGCACATGCACACAGATGTGTACACAG--AG i panTro5.chr20 I 4 C 0 s panPan2.chr20 62064023 48 + 62195757 GTGTA-----CACAGAGAGGCACGCGCACATACACACAGATGTGTACACAG--AG i panPan2.chr20 I 4 C 0 s rheMac8.chr10 92703971 48 - 92844088 gtgtg-----tacagagatgcacgcacacatgcacacacaggtgtgtacag--ag i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96371311 48 + 96509753 atgtg-----tacacagatgcacacacacttgcacacacaggtgtgtacac--ag i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16841951 48 - 16982598 gtgtg-----tacacagatgcacgcacacatgcacacacaggtgtgtacac--ag i macNem1.NW_012014244v1 I 2 C 0 s cerAty1.NW_012001373v1 3644478 50 - 3785965 gtgtg-----tacacagatgcacgcacacatgcacacacacatgtgtacacagag i cerAty1.NW_012001373v1 I 2 C 0 s calJac3.chr5 58169864 42 + 159171411 -----------atgcgcagacacgtgtacgcagacacagatgtgcacactt--gg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235622 42 + 16356641 -----------actcacggacatgtgcacgcagacacagatgtgcacacat--gg i saiBol1.JH378156 C 0 I 2 s canFam3.chr24 47566168 23 + 47698779 ------------------------------TGCACATATGTGTGCACGCAT--AG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 200802 44 - 397369 GTGCAGCCCTTGTGAGCAGTCACGCGGGCACGGGC-----TGTGCACAC------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e chlSab2.chr2 90265890 137 - 90373283 T e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e manLeu1.NW_012101652v1 29654 5821 - 179258 T e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e nomLeu3.chr13 109977020 0 - 110113093 C e otoGar3.GL873542 22797994 1560 + 22939663 I a score=15079.000000 s hg38.chr20_KI270870v1_alt 58568 7 + 183433 AGGCACG s panTro5.chr20 66383349 7 + 66533130 AGGCACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064071 7 + 62195757 AGGCACG i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92704019 7 - 92844088 atgcacg i rheMac8.chr10 C 0 I 324 s macFas5.chr10 96371359 7 + 96509753 atgcacg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16841999 7 - 16982598 atgcacg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644528 7 - 3785965 atgcacg i cerAty1.NW_012001373v1 C 0 C 0 s saiBol1.JH378156 16235666 7 + 16356641 attcaca i saiBol1.JH378156 I 2 I 2 s canFam3.chr24 47566191 6 + 47698779 ATTCAC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 200846 6 - 397369 -GGCACG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e chlSab2.chr2 90265890 137 - 90373283 T e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e manLeu1.NW_012101652v1 29654 5821 - 179258 T e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e nomLeu3.chr13 109977020 0 - 110113093 C e otoGar3.GL873542 22797994 1560 + 22939663 I a score=11258.000000 s hg38.chr20_KI270870v1_alt 58575 6 + 183433 CGCACA s panTro5.chr20 66383356 6 + 66533130 CGCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064078 6 + 62195757 TGCACA i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92704350 6 - 92844088 cacaca i rheMac8.chr10 I 324 C 0 s macFas5.chr10 96371366 6 + 96509753 cacaca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842006 6 - 16982598 cacaca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644535 6 - 3785965 cacaca i cerAty1.NW_012001373v1 C 0 C 0 s saiBol1.JH378156 16235675 6 + 16356641 cagaca i saiBol1.JH378156 I 2 C 0 s dasNov3.JH569290 200852 6 - 397369 AGTCCA i dasNov3.JH569290 C 0 I 2992 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566197 0 + 47698779 C e colAng1.NW_012114444v1 5516181 2 - 5823884 I e chlSab2.chr2 90265890 137 - 90373283 T e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e manLeu1.NW_012101652v1 29654 5821 - 179258 T e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e nomLeu3.chr13 109977020 0 - 110113093 C e otoGar3.GL873542 22797994 1560 + 22939663 I a score=99062.000000 s hg38.chr20_KI270870v1_alt 58581 66 + 183433 CGTACACACAGATGTGTACACAG--AT--GCACGCACACACGTACACAC---AGATGTGTACACAGAG--GCACG s panTro5.chr20 66383362 70 + 66533130 CATACACACAGATGTGTACACAG--AGAGGCACGCGCACACATACACAC---AGATGTGTACACAGAGAGGCACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064084 68 + 62195757 CATACACACAGATGTGTACACAG--AGAGGCACGCACACGC--ACACAC---AGATGTGTACACAGAGAGGTATG i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92704356 66 - 92844088 tgcacacacaggtgtgtacacag--at--gcacgcacacatgcacacac---agatgtgtacacag--atgcacg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371372 68 + 96509753 tgcacacacaggtgtgtacacag--at--gcacgcacacatgcacacac---agatgtgtacacggagatgcacg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842012 68 - 16982598 tgcacacacaggtgtgtacacag--at--gcacgcacacatgcacacac---aggtgtgtacacagatatgcacg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644541 68 - 3785965 tgcacacacaggtgtgtacacagatat--gcatgcacacatgcacacac---aggtgtgtacacag--atgcaca i cerAty1.NW_012001373v1 C 0 C 0 s saiBol1.JH378156 16235681 50 + 16356641 cgtgcatgcag------acatgg------acatgcacacgtggacgttc---atgtgcagacacg---------- i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47566197 50 + 47698779 ---------AGGTGTGCACACAC------GCACGCACACGTGTACAGATACAACATACGTGCACA---------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e chlSab2.chr2 90265890 137 - 90373283 T e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e manLeu1.NW_012101652v1 29654 5821 - 179258 T e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e nomLeu3.chr13 109977020 0 - 110113093 C e otoGar3.GL873542 22797994 1560 + 22939663 I a score=5533.000000 s hg38.chr20_KI270870v1_alt 58647 2 + 183433 CA s panTro5.chr20 66383432 2 + 66533130 CA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064152 2 + 62195757 CA i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109977020 2 - 110113093 ca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704422 2 - 92844088 ca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96371440 2 + 96509753 ca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842080 2 - 16982598 ca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644609 2 - 3785965 ca i cerAty1.NW_012001373v1 C 0 C 0 s saiBol1.JH378156 16235731 2 + 16356641 ta i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47566247 2 + 47698779 GA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e colAng1.NW_012114444v1 5516181 2 - 5823884 I e chlSab2.chr2 90265890 137 - 90373283 T e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e manLeu1.NW_012101652v1 29654 5821 - 179258 T e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=8380.000000 s hg38.chr20_KI270870v1_alt 58649 3 + 183433 CAC s panTro5.chr20 66383434 3 + 66533130 CAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064154 3 + 62195757 CAC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109977022 3 - 110113093 cac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704424 3 - 92844088 cac i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96371442 3 + 96509753 cac i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16842082 3 - 16982598 cac i macNem1.NW_012014244v1 C 0 I 2 s saiBol1.JH378156 16235733 3 + 16356641 cat i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47566249 3 + 47698779 TAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e cerAty1.NW_012001373v1 3644611 0 - 3785965 C e colAng1.NW_012114444v1 5516181 2 - 5823884 I e chlSab2.chr2 90265890 137 - 90373283 T e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e manLeu1.NW_012101652v1 29654 5821 - 179258 T e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=9249.000000 s hg38.chr20_KI270870v1_alt 58652 3 + 183433 GCA s panTro5.chr20 66383437 3 + 66533130 GCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064157 3 + 62195757 GTA i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109977025 3 - 110113093 gta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704429 3 - 92844088 gca i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96371447 3 + 96509753 gca i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16842087 3 - 16982598 gca i macNem1.NW_012014244v1 I 2 C 0 s manLeu1.NW_012101652v1 23833 3 - 179258 GCA i manLeu1.NW_012101652v1 T 5821 C 0 s saiBol1.JH378156 16235736 3 + 16356641 gca i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47566252 3 + 47698779 GGA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e cerAty1.NW_012001373v1 3644611 0 - 3785965 C e colAng1.NW_012114444v1 5516181 2 - 5823884 I e chlSab2.chr2 90265890 137 - 90373283 T e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=80772.000000 s hg38.chr20_KI270870v1_alt 58655 25 + 183433 CACACAGATGTGTAC-ACAGAGAGGT s panTro5.chr20 66383440 25 + 66533130 CACACAGATGTGTAC-ACAGAGAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064160 25 + 62195757 CACACAGATGTGTAC-ACAGAGAGGC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109977028 25 - 110113093 cacacagatgtgtac-acagagatac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704432 23 - 92844088 cacacaggtgtgtac-ac--agatgc i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96371450 25 + 96509753 cacacagatgtgtac-acagagatgc i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16842090 25 - 16982598 cacacagatgtgtac-acagagatgc i macNem1.NW_012014244v1 C 0 I 2 s chlSab2.chr2 90265753 25 - 90373283 CACACAGGTGTGTAC-ACGGAGATGC i chlSab2.chr2 T 137 I 2 s manLeu1.NW_012101652v1 23836 25 - 179258 CACATAGATGTGTac-acagagatgc i manLeu1.NW_012101652v1 C 0 I 2 s saiBol1.JH378156 16235739 25 + 16356641 ggcacagatgtgcac-atgtggatgt i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47566255 26 + 47698779 TTCTTAGACTCGTGCAACAGATGGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e cerAty1.NW_012001373v1 3644611 0 - 3785965 C e colAng1.NW_012114444v1 5516181 2 - 5823884 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=195261.000000 s hg38.chr20_KI270870v1_alt 58680 81 + 183433 ACGCACAC--GTACACACAGATGTGTACACAGAGAGGCACGCACACATGCACACACAGATGTGTACACAGAGAGGCACGC--------------------------------------ACA s panTro5.chr20 66383465 119 + 66533130 ACGCACAC--GTACACACAGATGTGTACACAGAGAGGCACGCACACATGCACACACAGATGTGTACACAGAGAGGCACGCGCACATGCACACACAGATGTGTACACAGAGAGGCATGCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064185 83 + 62195757 ACGCACACATGCACACACAGATGTGTACACAGAGAGGCACGCGCACATGCACACACAGATGTGTACACAGAGAGGCATGC--------------------------------------ACA i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109977053 75 - 110113093 atgcatat--atgcacacagatatgtacac--agatgcacgcacacatgtacacacagatgtgt--acagagatgcac----------------------------------------aca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704457 79 - 92844088 gcacacat--g--cacgcagatgtgtacacacagatgcacgcacacatgcacacacaggtgtgtacacagatgcacacac--------------------------------------aca i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96371477 81 + 96509753 gcacacat--gcacacacagatgtgtacacagagatgcacgcacacatgcacacacagatgtgtacacagagatgcacgc--------------------------------------aca i macFas5.chr10 I 2 I 478 s macNem1.NW_012014244v1 16842117 79 - 16982598 gcacacat--gcacacacagatgtgtacac--agatgcacgcacacatgcacacacagatgtgtacacagagatgcacgc--------------------------------------aca i macNem1.NW_012014244v1 I 2 I 4 s chlSab2.chr2 90265780 81 - 90373283 GCACACAT--GTACACACAGATGTGTACACAGAGATGCAcacacacacatgcacacacatgtgaacacagagatgcacac--------------------------------------aca i chlSab2.chr2 I 2 I 4 s manLeu1.NW_012101652v1 23863 81 - 179258 gcacacat--gcacacacaggtgtgtacacagatatgcacgcacacatgcacacacagatgtgtacacagagatgcacgc--------------------------------------aca i manLeu1.NW_012101652v1 I 2 I 4 s colAng1.NW_012114444v1 5516183 68 - 5823884 Gcacacat--gcacacaca----tgta-acacagatgcacgcacacatgtacac------gtgtacacaga--tgcacac--------------------------------------aca i colAng1.NW_012114444v1 I 2 C 0 s saiBol1.JH378156 16235764 59 + 16356641 ----------ccacgcacagacacgtgcacgcaga--------cacgtgcacatgtggatgttcacacgcagacaca-------------------------------------------- i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47566281 17 + 47698779 --------------------------------------AAGCACACGTGTGTACA------------------------------------------------------------------ i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e cerAty1.NW_012001373v1 3644611 0 - 3785965 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=98493.000000 s hg38.chr20_KI270870v1_alt 58761 23 + 183433 CACACACAGATGTGTACACAGAG s panTro5.chr20 66383584 23 + 66533130 CACACACAGATGTGTACACAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064268 23 + 62195757 CACACACAGATGTGTACACAGAG i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109977128 23 - 110113093 tgcacacagatgtgtacacagag i nomLeu3.chr13 C 0 I 2 s rheMac8.chr10 92704536 23 - 92844088 tgcacacaggtgtgtacacagat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96372036 23 + 96509753 cacacacagatgtgtacacagat i macFas5.chr10 I 478 C 0 s macNem1.NW_012014244v1 16842200 23 - 16982598 cacacacaggtgtgtacacagag i macNem1.NW_012014244v1 I 4 C 0 s chlSab2.chr2 90265865 23 - 90373283 cacacacagatgtgtacacagag i chlSab2.chr2 I 4 I 2 s manLeu1.NW_012101652v1 23948 23 - 179258 cacacacaggtgtgtacacagat i manLeu1.NW_012101652v1 I 4 I 2 s colAng1.NW_012114444v1 5516251 21 - 5823884 --tgcacacacgtgaacacagat i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16235823 23 + 16356641 tgcacacagacacgtgcacacgt i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47566298 23 + 47698779 CACACGTAACTGTGCACACAAAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e cerAty1.NW_012001373v1 3644611 0 - 3785965 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=136944.000000 s hg38.chr20_KI270870v1_alt 58784 47 + 183433 GCACGCACACATG--CACACAGATGTGTACAC--AGAGGCACGTGCACATG s panTro5.chr20 66383607 47 + 66533130 GCACGCACACATG--CACACAGATGTGTACAC--AGAGGCATGCGCACATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064291 47 + 62195757 GCACGCACACATG--CACACAGATGTGTACAC--AGAGGCATGCGCACATG i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109977153 49 - 110113093 gcacacacacatgcacacacagatgtgtacac--agatgcacacatgcatg i nomLeu3.chr13 I 2 C 0 s rheMac8.chr10 92704559 49 - 92844088 gcacacacacatgcacacacaggtgtgtacac--agatgcacgcacacatg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96372059 49 + 96509753 gcacgcacacatgcacacacaggtgtgtacac--agatgcacgcacacatg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842223 43 - 16982598 atgc--------gcacacacaggtgtgtacacagagattcacacacacatg i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90265890 49 - 90373283 gcacacacacatgcacacaggtgtgtacacag--agatgcacacacacatg i chlSab2.chr2 I 2 C 0 s manLeu1.NW_012101652v1 23973 49 - 179258 gcatgcacacatgcacacacaggtgtgtacac--agatgcacacacacatg i manLeu1.NW_012101652v1 I 2 C 0 s colAng1.NW_012114444v1 5516272 49 - 5823884 gcacacacacatgtacacacatgtgtacacag--agatgcacgcacacatg i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16235846 33 + 16356641 ggacgttcacatg------cagatgggcatgc--aga----------cttg i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47566321 33 + 47698779 ----------GTGTGCA---AGGTGTGCACAT--GCAG---CGTGCACACG i canFam3.chr24 C 0 I 1393 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e cerAty1.NW_012001373v1 3644611 0 - 3785965 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e calJac3.chr5 58169906 0 + 159171411 C e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=24649.000000 s hg38.chr20_KI270870v1_alt 58831 8 + 183433 CACACACA-- s panTro5.chr20 66383654 8 + 66533130 CACACACG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064338 8 + 62195757 CACACACG-- i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109977202 8 - 110113093 cacacacg-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704608 8 - 92844088 cacacaca-- i rheMac8.chr10 C 0 I 4 s macFas5.chr10 96372108 8 + 96509753 cacacaca-- i macFas5.chr10 C 0 I 4 s macNem1.NW_012014244v1 16842266 8 - 16982598 cacacaca-- i macNem1.NW_012014244v1 C 0 I 4 s chlSab2.chr2 90265939 8 - 90373283 cacacaca-- i chlSab2.chr2 C 0 I 4 s manLeu1.NW_012101652v1 24022 8 - 179258 cacacaca-- i manLeu1.NW_012101652v1 C 0 I 4 s colAng1.NW_012114444v1 5516321 8 - 5823884 cacacaca-- i colAng1.NW_012114444v1 C 0 I 4 s calJac3.chr5 58169906 1 + 159171411 ---------a i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235879 10 + 16356641 cacacgtgga i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e cerAty1.NW_012001373v1 3644611 0 - 3785965 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e gorGor5.CYUI01015848v1 449396 0 - 578057 C e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=51602.000000 s hg38.chr20_KI270870v1_alt 58839 20 + 183433 TGTACAC----AG--AGAGGCACGCG s panTro5.chr20 66383662 18 + 66533130 TGTACAC----AG--AG--GCACACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064346 18 + 62195757 TGTACAC----AG--AG--GCACGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449396 16 - 578057 tgtacac----ag------gcacgcg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109977210 20 - 110113093 tgtacac----ag--agatgcacgca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704620 18 - 92844088 tgtacac----ag--at--gcacaca i rheMac8.chr10 I 4 C 0 s macFas5.chr10 96372120 18 + 96509753 TGTACAC----AG--AT--GCATGCA i macFas5.chr10 I 4 C 0 s macNem1.NW_012014244v1 16842278 18 - 16982598 tgtacac----ag--at--gcacaca i macNem1.NW_012014244v1 I 4 C 0 s chlSab2.chr2 90265951 20 - 90373283 tgaacac--agag--at--gcacgca i chlSab2.chr2 I 4 C 0 s manLeu1.NW_012101652v1 24034 18 - 179258 tgtacac----ag--at--gcacaca i manLeu1.NW_012101652v1 I 4 C 0 s colAng1.NW_012114444v1 5516333 20 - 5823884 tgtacac----agacat--gcacgca i colAng1.NW_012114444v1 I 4 C 0 s calJac3.chr5 58169907 20 + 159171411 tgttcacgtgcag--at--gcatg-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235889 20 + 16356641 tgtccacgcacag--ac--aCGTG-- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e cerAty1.NW_012001373v1 3644611 0 - 3785965 C e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=349379.000000 s hg38.chr20_KI270870v1_alt 58859 58 + 183433 CACATG--CACACAGATGTGTACACAGAGAT----GCAcac----atgcacacagaaatgggcatgca s panTro5.chr20 66383680 58 + 66533130 CACATG--CACACAGATGTGTACACAGAGAT----GCACAC----ATGCACACAGAAATGGGCATGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064364 58 + 62195757 CACATG--CACACAGATGTGTACACAGAGAT----GCACAC----ATGCACACAGAAATGGGCATGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449412 58 - 578057 cacatg--cacacagatgtgtacacagagag----gcacac----atgcacacagaaatgggcatgca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109977230 62 - 110113093 cgcatg--cacacagatgtgtacacagagatgcacGCACAC----ATGCACATAGAAATGGGCATGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704638 62 - 92844088 cacatg--cacgcagatgtgtacacagagat----gcacacacgtatgcacacaGAAATGAGCATGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96372138 62 + 96509753 CACATG--CACGCAGATGTGTACACAGAGAT----GCACACACGTATGCACACAGAAATGGGCATGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842296 62 - 16982598 cacatg--cacgcagatgtgtacgcagagat----gcacacacgtatgcacacagaaatgggcatgca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644611 62 - 3785965 cacatg--catgcagatgtgtacacagagat----gcacacacatatgcacaAAGAAATGGGCATGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90265971 60 - 90373283 cacatg--cacacaGGTGTGTACACAGAGAT----GCACACAC--ACGCACACAGAAATGGGCATGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 24052 62 - 179258 cacatg--cgcgcagatgtgtacacagagat----gcacacacatatgcacacaGACATGGGCATGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516353 64 - 5823884 cacatgcacacacagatatgtacacagagat----gcacacacacatgcacacaGAAATGGGCATGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169927 54 + 159171411 cacgca--gacacagacgtgcacacgtagac----gttcac--------gcacagacgcatgcacgca i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235909 50 + 16356641 CAACCA--G----AGACGTGTACACATGGAT----GTTCAT--------GCACAGACACGTGCATGCA i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e aotNan1.NW_018500483v1 2631520 1254 + 11732439 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=15256.000000 s hg38.chr20_KI270870v1_alt 58917 5 + 183433 catg-c s panTro5.chr20 66383738 5 + 66533130 CATG-C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064422 5 + 62195757 CATG-C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449470 5 - 578057 catg-c i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109977292 5 - 110113093 CATG-C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704700 5 - 92844088 CATG-C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96372200 5 + 96509753 CATG-C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842358 5 - 16982598 catg-c i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644673 5 - 3785965 CATG-C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90266031 5 - 90373283 CATG-C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 24114 5 - 179258 CATG-C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516417 5 - 5823884 CATG-C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169981 1 + 159171411 ---G-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235959 1 + 16356641 ---G-- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2632774 5 + 11732439 CATGC- i aotNan1.NW_018500483v1 I 1254 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e cebCap1.NW_016107870v1 1102372 490 + 1231380 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=1180685.000000 s hg38.chr20_KI270870v1_alt 58922 124 + 183433 acacagatgtactcacatggatgttcacacacacacacatgcacGCAAACACAGCCCCTC--TGCAGCTCTGCTGTCTGCCTCAGG--TGGGGGCCATGCTGGGTGAAACTGTCATTTCTCCCTGTCT s panTro5.chr20 66383743 124 + 66533130 ACACAGATGTACACACATGGATGTTCACACACATACACATGCACGCAAACACAGCCCCTC--TGCAGCTCTGCTGTCTGCCTCAGG--TGGGGGCCATGCTGGGTGAAACTGTCATTTCTCCCTGTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064427 124 + 62195757 ACACAGATGTACACACATGGATGTTCACACACATACACATGCACGCAAACACAGCCCCTC--TGCAGCTCTGCTGTCTGCCTCAGG--TGGGGGCCATGCTGGGTGAAACTGTCATTTCTCCCTGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449475 123 - 578057 acacagatgtacacacatggatgttcacacacatacacatgcacgcaaacacaGCCCCTC--TGCAGCTCTGCTGTCTGCCTCAGG--T-GGGGCCATGCTGGGTGAAACTGTCATTTCTCCCTGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109977297 125 - 110113093 ACACAGATGTACACACATGGATGTTCACACCCATACACATGCACGCAAACACAGCCCCTC--TGCAGCTCTGCTGTCTGCCTCAGGGTTGGGGCCCATGCT-AGTGAAACTGTCATTTCTCCCTGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704705 126 - 92844088 ACACAGATGTACACACATGGATGTTCACACACATACACATGCACGCAAACACAACCCCTCTGTGCAGCTCTACTGTCTGCCTCAGG--TTGGGGCCATGCTGGGTGAAGATGTCATTTCTCCCTGTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96372205 126 + 96509753 ACACAGATGTACACACATGGATGTTCACACACATACACATGCACGCAAACACAACCCCTCTGTGCAGCTCTACTGTCTGCCTCAGG--TTGGGGCCATGCTGGGTGAAGATGTCATTTCTCCTTGTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842363 126 - 16982598 acacagatgtgcacacatggatgttcacacacatacacatgcacgcacacacaACCCCTCTGTGCAGCTCTACTGTCTGCCTCAGG--TTGGGGCCATGCTGGGTGAAGATGTCATTTCTCCCTGTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644678 126 - 3785965 ACACAGATGTACACACATGGATGTTCACACACATACACATGCACGCAAACACAACCCCTCGGTGCAGCTCTACTGTCTGCCTCAGG--TTGGGGCCATGCTGGGTGAAGCTGTCATTTCTCCCTGTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90266036 126 - 90373283 ACACTGATGTACACACATGGATGTTCACACACATACACATGCATGCAAACACAACCCCTCTGTGCGGCTCTACTCTCTGCCTCAGG--TTGGGGCCATGCTGGGTGAAGCTGTAATTTCTCCCTGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 24119 126 - 179258 ACACAGATGTACACACATGGATGTTCACACACATACACATGCACGCAAACACAACCCCTCTGTGCAGCTCTACTGTCTGCCTCAGG--TTGGGGCCATGCTGGGTGAAGCTGTCATTTCTCCCTGTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516422 126 - 5823884 ACACAGATGTACACACATGGATGTTCACACACATACACATGCACGCAAACACAACCCCTCTGTGCAGCTCTACTGTCTGCCTCAGG--TTGGGGCCATGCTGGGTGAAGCTGTCATTTCTCCCTGTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58169982 124 + 159171411 --ACAGACGTGCACATGTGGACGTTAACGCGCAGGCACGTGCATGCAGACACAGCCCCTCTGTGCAGCTCTGCTGTCTGCTTCAGC--CTGGGGCCAGGCTGGGCGAAACTGCTATTTCTCCCTGTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16235960 126 + 16356641 ACACAGATGTGCACACGTGGATGTTCATGCGCAGACACGTGCACGCAGACACAGCCCCTCTGTGCAGCTCTTCTGTCTGCCTCAGC--CTGGGGCCAGGCTGAGCGAAACTGCCATTTCTCCCTGTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1102862 126 + 1231380 ACACAGACGTGCACACGTGGATGTTCACAAGCAGACACGTGCCTGTAGACACAGCCCCTCTGTGCAGCTCTGCTGTCTGCCTCAGC--CTGGGGCCAGGCTGGGCGAAACTGCCTTTTCTCCCTGTCT i cebCap1.NW_016107870v1 I 490 I 31 s aotNan1.NW_018500483v1 2632779 126 + 11732439 ACACAGACATGCACACGTGGACGTTCACGCGCAGACACGTGCACACAGACACAGCCCCTCTGTGCAGCTCTGCTGTCTGCCTCAGC--CTGGGGCCAGGCTGGGCAAAACTGCCATTTCTCCCTGTCT i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=302942.000000 s hg38.chr20_KI270870v1_alt 59046 44 + 183433 ATAAGCTCCT-GCCTTgaggctatgaagacaagaggatgtg--aact s panTro5.chr20 66383867 44 + 66533130 ATAAGCTCCT-GCCTTGAGGCTATGAAGACaagaggacatg--aact i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064551 44 + 62195757 ATAAGCTCCT-GCCTTGAGGCTATGAAGACaagaggacatg--aact i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449598 44 - 578057 ATAAGCTCCT-GCCTTgaggctatgaagacaagaggacgtg--aact i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109977422 47 - 110113093 GTAATTTCCTGGCCTTGAGGCTATGAACACCAGAAGACATGAAAATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704831 44 - 92844088 CTAAGTTCCT-GCCTTGAGGCTATGAAGACAAGGGAATATG--AATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96372331 44 + 96509753 CTAAGTTCCT-GCCTTGAGGCTATGAAGACAAGGGAATATG--AACG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842489 44 - 16982598 CTAAGTTCCT-GCCTTGAGGCTATGAAGACAAGGGAATATG--AACG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644804 44 - 3785965 CTAAGTTCCT-GCCTTGAGGCTATGAAGAcaagggaatatg--aacg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90266162 44 - 90373283 CTAAGTTCCT-GCCTTGAGGCTATGAAGTCAAGGGAATATG--AACG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 24245 44 - 179258 CTAAGTTCCT-GCCTTGAGGCTATGAAGACAAGGGAGTATG--AACG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516548 44 - 5823884 CTAAGTTCCT-GCCTTGAGGCTATGAAGACAAGGGGACATG--AACG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58170106 44 + 159171411 ATGAGTTCCT-GCCTTTAGCCTGTGAAGCCCAGAGGACACA--AGCG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16236086 44 + 16356641 GCGAGTTCCT-GCCTTTAGCCTGTGAAGCCCAGAGGACACA--AGCG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2632905 44 + 11732439 GTGAGTTCCT-GCCTTTAGCCTGTGAAGCCCAGAGGACACA--AGCG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e cebCap1.NW_016107870v1 1102988 31 + 1231380 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=3106385.000000 s hg38.chr20_KI270870v1_alt 59090 348 + 183433 gctctctgg-aggcagaagacgtgggttc-aaatcttggct-cttctctggg-cctcaggtttc-tggtctgtagac-taggatattggaG--TTTTACTC-AC--GTTACTGG--AGGGATGA-GGGCCCTAAATCAGGAGCTGGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGAG-AAGGACAGGCCTTCCCTAGGTGAGGTGCTACTA---------------------CTGTGGAAAGTGGTCTAGTTTCCCCTCTGCCCCTATGGGCACCCAGTGGAAGAAGCTGGTGGTCAGTGATGGGCGGACTAG-TCCTGAGGTCCTAAG--ACTGGAGTGTCTGGATGATCAGTGTGACCTCTCAGAGAAGAGGTG s panTro5.chr20 66383911 348 + 66533130 gctctctgg-aggcagaagacctgggttc-aaatcttggct-cttctctggg-cctcaggtttc-tggtctgtagac-taggatattggaG--TTTTACTC-AC--GTTACTGG--AGGGATGA-GGGCCCTAAATCAGGAGCTGGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGAG-AAGGACAGGCCTTCCCTAGGTGAGGTGCTACTG---------------------CTGTGGAAAGTGGTCTAGTTTCCTCTCTGCCCCTATGGGCACCCAGTGGAAGAAGCTGGTGGTCAGTGATGGGCGGACTAG-TCCTGAGGTCCTAAG--ACTGGAGTGTCTGGATGATCAGTGTGACCTCTCAGAGAAGAGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064595 348 + 62195757 gctctctgg-aggcagaagacctgggttc-aaatcttggct-cttctctggg-cctcaggtttc-tggtctgtagac-taggatattggaG--TTTTACTC-AC--GTTACTGG--AGGGATGA-GGGCCCTAAATCAGGAGCTGGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGAG-AAGGACAGGCCTTCCCTAGGTGAGGTGCTACTG---------------------CTGTGGAAAGTGGTCTAGTTTCCTCTCTGCCCCTATGGGCACCCAGTGGAAGAAGCTGGTGGTCAGTGATGGGCGGACTAG-TCCTGAGGTCCTAAG--ACTGGAGTGTCTGGATGATCAGTGTGACCTCTCAGAGAAGAGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449642 348 - 578057 gctctccgg-aggcagaagacctgggttc-aaatcttggct-cttctctggg-cctcaggtttc-tggtctgtagac-taggatattggaG--TTTTACTCAAT--GTTACC-G--AGGGATGA-GGGCCCTAAATCAGGAGCTGGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGAG-AAGGACAGGCCTTCCGTAGGTGAGGTGCTACTA---------------------CTGTGGAAAGTGGTCTAGTTTCCTCTCTGCCCCTACGGGCACCCAGTGGAAGAAGCTAGTGGTCAGTGATGGGCGGACTAG-TCCTGAGGTCCTAAG--ACTGGAGTGTCTGGATGATCAGTGTGACCTCTCAGAGAAGAGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109977469 362 - 110113093 GTTCTCTGGAAGGGAGAAAACCTGGGTTCAAAACCTTGGCTCCTTCTCTGGGCCCTCAGGGTTCTTGGCTTGTAAACTTAGGATACTGGGATTTTTTCTTC-TT--GTTACTGGCAGGGAATGAGGGGCCCTAAAGCAGGAGCTGGGAACCCGGTGTATGGTAAGTTGTGGGAGTGGAGGACTGTGGAGAAAGGACAGGCCTTCCCTAGGTGAGGCGCTACTA---------------------CTATGGAGAGTGGTCTAGTTTCCTCTCTGCCCCTATGGGCACTCAGTGGAAGAAGCTGGTGGTCAGTGATGGGCAGACTAGTTTCTGAGGTCCTCAG--ACTGGAGTGTCTGGATGATCAGTGTGACCTCTCAGAGAAGAGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92704875 372 - 92844088 GCTctctgg-aggcagaagacctaggttc-aaatattgact-ctTCTCTGGG-CCTCGGGTTTC-TGGTCTGTAGAC-TAGGATATTGGAG--TTTTACTC-AC--GTTACTGG--AGGGATGA-GGGCCCTAAAGCAGCAGCTGGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGGGAAAGGACAGGCCTTCCCTAGGTGAGGGGCTACTACTGTGGAGAGTGGTCTAGTTTCTGTGGAGAGTGGTCTAGTTTCCTCTCTGCCCCTACGGGCATCCAGGGGAAGAAGCTGGTGGTCAGTGATGGGCAGACTAG-TCCTCAGGTCCTAAGACACTGGAGTGTCTGGATGACCAGTGTGACCTCTCAGAGAAGAGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96372375 372 + 96509753 GCTCTCTGG-AGGCAGAAGACCTAGGTTC-AAATATTGACC-CTTCTCTGGG-CCTTGGGTTTC-TGGTCTGTAGAC-TAGGATATTGGAG--TTTTACTC-AC--GTTACTGG--AGGGATGA-GGGCCCTAAAGCAGCAGCTGGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGGGAAAGGACAGGCCTTCCCTAGGTGAGGGGCTACTACTGTGGAGAGTGGTCTAGTTTCTGTGGAGAGTGGTCTAGTTTCCTCTCTGCCCCTACGGGCATCCAGGGGAAGAAGCTGGTGGTCAGTGATGGGCAGACTAG-TCCTCAGGTCCTAAGACACTGGAGTGTCTGGATGACCAGTGTGACCTCTCAGAGAAGAGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842533 372 - 16982598 GCTCTCTGG-AGGCAGAAGACCTAGGCTC-AAATATTGACT-CTTCTCTGGG-CCTCGGGTTTC-TGGTCTGTAGAC-TAGGATATTGGAG--TTTTACTC-AT--GTTACTGG--AGGGATGA-GGGCCCTAAAGCAGCAGCTGGCAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGGGAAAGGACAGGCCTTCCCTAGGTGAGGGCCTACTACTGTGGAGAGTGGTCTAGTTTCTGTGGAGAGTGGTCTAGTTTCCTCTCTGCCCCTACGGGCATCCAGGGGAAGAAGCTGGTGGTCAGTGATGGGCAGACTAG-TCCTCAGGTCCTAAGACACTGGAGTGTCTGGATGACCAGTGTGACCTCTCAGAGAAGAGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3644848 351 - 3785965 gctctctgg-aggcagaagacctaggttc-aaatattgact-ctTCTCTGGG-CCTCGGGTTTC-TGGTCTGTAGAC-TAGGATATTGGAG--TTTTACTC-AC--GTTACTGG--AGGGATGA-GGGCCCTAAAGCAGCAGCTGGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGGGAAAGGACAGGCCTTCCCTAGGTGAGGGGCTACTA---------------------CTGTGGAGAGTGGTCTAGTTTCCTCTCTGCCCCTACGGGCATCCAGGGGAAGAAGCTGGTGGTCAGTGATGGGCAGACTAG-TCCTCAGGTCCTAAGACACTGGAGTGTCTGGATGACCAGTGTGACCTCTCAGAGAAGAGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90266206 351 - 90373283 GCTCTCTGG-AGGCAGAAGACGTGGGTTC-AAATATTGACT-CTTCTCTGGG-CCTCGGGTTTC-TGGTCTGTAGAC-TAGGATATTGGAG--TTTTACTC-AC--GTTACTGG--AGGGATGA-GGGCCCTAAAGCAGCAGCTGGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGGGAAAGGACAGGCCTTCCCTAGGTGAGGGGCTACTA---------------------CTGTGGAGAGTGGTCTAGTTTCCTCTCTGCCCCTACAGGCATCCAGGGGAAGAAGCTGGTGGTCAGTGATGGGCAGACTAG-TCCTCAGGTCCTAAGACACTGGAGCGTCTGGATGACCAGTGTGACCTCTCAGAGAAGAGGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 24289 351 - 179258 GCTctctgg-aggcagaagacctaggttc-aaatattggct-ctTCTCTGGG-CCTCGGGTTTC-TGGTCTGTAGAC-TAGGATATTGGAG--TTTGACTC-AC--GTTACTGG--AGGGATGA-GGGCCCTAAAGCAGCAGCTGGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGGGAAAGGACAGGCCTTCCCTAGGTGAGGGGCTACTA---------------------CTGTGGAGAGTGGTCTAGTTTCCTCTCTGCCCCTACGGGCATCCAGGGGAAGAAGCTGGTGGTCAGTGATGGGCAGACTAG-TCCTCAGGTCCTAAGACACTGGAGTGTCTGGATGACCAGTGTGACCTCTCAGAGAAGAGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516592 351 - 5823884 GCTctctgg-aggcagaagacctgggttc-aaatattgact-ctTCTCTGGG-CCTTGGGTTTC-TGGTCTGTAGAC-TAGGATATTGGAG--TTTTAGTC-AT--GTTACTGG--AGGGATGA-GGGCCCTAAAGCAGCAGCTTGGAA-CTGGTGCATGGTAAGTTGTGGGAGTGGAGGACTGTGGGGAAAGGACAGGCCTTCCCTAGGTGAGGGGCTACTA---------------------CTGTGGAGAGTGGTCTAGTTTCCTCTCTGCCCCTACGAGCATCCAGGGGAAGAAGCTGGTGGTCAATGATGGGCAGACTAG-TCCTCAGGTCCTAAGACACTGGAGTGTCTGGATGACCAGTGTGACTTCTCAGAGAAGAGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58170150 311 + 159171411 GCTctccgg-aggcagaagacctgggttc-aaatctcagct-ctTGTCTGGG-TGCCATCTTTT-TGGTCTGTAGAC-AGGGGTATTGGAG--GTTTACTC-ACAAGTTACTGG--AGGGATGA-GGGCTCTAGAGCAGGAGCTGGGAA-CTGGTGCATGGCAAGTTGTGGGATTGGAGGACTGTGGAGAATGAACAGGGCTTCCCTAGGGGAAG-----CTG---------------------CTATGGGGAATGGTTTGGTTTCCTCCCCACCCC-ATGGG----------------------------------CAGACTCG-TCCTGAGATCCTAGG--GCTGGAGTGTCTGGATGATCAGTGTAACCTCTCAGAGAAGAGGTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16236130 332 + 16356641 GCTctctgg-tggcagaagatctgggttc-aaatctcggct-ctTGACTGGG-TGCCATCTTTT-TGGTCTGTAGAC-AGGGATATTGGAG--GTTTACTC-ACAAGTTACTGG--AGGGATGA-GGGCTCTA------AAGCTGGGAA-CTGGTGCATGGCAAGTTGTGGGATTGGAGGACTCTGGAGAATGAACAGGGCTTCCCTAGGTGAGGGGCTACTG---------------------CTATGGAGAATGGTTTGGTTTCCTCTCCACCCC-ATGGGCACCCAGGGGAAGGAGCTGATGGT----------CAGACTTG-TCCTGAAGTCCTAGG--GCTGGAGTGCCTGGATTATCAGTGTGACCTCTC--AGAAGAGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1103019 350 + 1231380 GCTctctgg-aggcagaagacctggattc-aaatcttggct-ctTGTCTGGG-TGCCATCTTTT-TGGTCTGTAGAC-AGGGATATTGGAG--GTTTACTC-ACAAGTTACTGG--AGGGATGA-GGGCTCTAAAGCAGGAGCTGGGAA-CTGGTGCATGGCAAGTTGTGGGACTGGAGGACTGTGGAGAATGAACAGGGCTTCCCTAGGTGAGGGGTTACGG---------------------CTATGGAGAATGCTTTGGTTTCCTCTCCACCCC-ATGGGCACCCAGGGGAAGGAGCTGATGGTCAGTGACAGGCAGACTCG-TCCTGAGGTCCTAGG--GCTGGAGTGTCTGGATGATCAGTGTGACCTCTCAGAGAAGAGGTG i cebCap1.NW_016107870v1 I 31 C 0 s aotNan1.NW_018500483v1 2632949 348 + 11732439 GCTctccag-agtcagaagacctgggttc-aaatctcggct-GTTGTCTGGG-TGCCATCTTTT-TGGTCTGTAGAC-AGGGATATTGGAG--CTTTACTC-ACAAGTTACTGG--AGGGATGA-GGGCTCTAGAGCAGCAGCTGGGAA-CTGGTGCATGGCAAGTTGTGGGGCTGGAGGAC--TGGAGAATGAACAGGGATTCCCTAGGGGAGGGGCTGCTG---------------------CCGTGGAGAATCGTTTGGTTTCCTCTCCACCTC-ACGGGCACCCAGGGGAAGGAGCTGGTGGTCAGTGACAGGCAGAGTCG-TCCTGAGGTCCTAGG--GCTGGAGTGTCTGGATGATCAGTGTGACCTCTCGGAGAAGAGGTG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e mm10.chr2 181753345 1727 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=2056402.000000 s hg38.chr20_KI270870v1_alt 59438 211 + 183433 CACACCTAGGGGTCTGGCTAAGGGAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGTCAGGCTGGGT-ACACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGACATCTGGGCCTAGGCCCCAAGAAGAGTGGGG-ATCAGGCCTTCATGGGTGGTGTTGGAGAGCCCTGAACAGGATGTGACT s panTro5.chr20 66384259 211 + 66533130 CACACCTAGGGGTCTGGCTAAGGGAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGCCAGGCTGGGT-ACACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGACATCTGGGCCTAGGCCCCAAGAAGAGTGGGG-ATCAGGCCTTCATGGGTGGTGTTGGAGAGCCCTGAACAGGATGTGACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62064943 211 + 62195757 CACACCTAGGGGTCTGGCTAAGGGAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGCCAGGCTGGGT-ACACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGACATCTGGGCCTAGGCCCCAAGAAGAGTGGGG-ATCAGGCCTTCATGGGTGGTGTTGGAGAGCCCTGAACAGGATGTGACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 449990 211 - 578057 CACACCTAGGGGTCTGGCTAAGGAAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGCCAGGCTGGGT-ACACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGACATCTGGGCCTAGGCCCCAAGAAGAGTGGGG-ATCAGGCCTTCATGGGTGGTGTTGGAGAGCCCTGAACAGGATGTGACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109977831 211 - 110113093 CACACCTAGGAGTCTGGCTATGGGAAGGGGAGGGTGTCAGTACAGGAGCTGCAGGGACTAGGCCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGACATCTGGGCCTAGGCCCCAAGAAGAGTGGGG-ATCAGGCCTTCGTGGGTGATGTTGGAGAGCCCTGAACAGGATGTGACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92705247 210 - 92844088 TACACCCAGGGATCTGGCTATGGGAAGGGGAGGATGTCAGTACAGGAACTGCAGGGACTAGGCCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGATATCTGGGCC-AGGCCCCAAGGAGAGTAGGG-GTCAGGCCTTCATGGTCGGTGTTGGAGAGCCCTGAACAGGATGTGACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96372747 210 + 96509753 TACACCCAGGGATCTGGCTATGGGAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGCCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGATATCTGGGCC-AGGCCCCAAGGAGAGTAGGG-GTCAGGCCTTCATGGTCGGTGTTGGAGAGCCCTGAACAGGATGTGACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16842905 210 - 16982598 GACACCCAGGGATCTGGCTATGGGAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGTCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGATATCTGGGCC-AGGCCCCAAGGAGAGTAGGG-GTCAGGCCTTCATGGTTGGTGTTGGAGAGCCCTGAACAGGATGTGACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3645199 210 - 3785965 TACACCCAGGGATCTGGCTATGGGAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGCCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGATATCTGGGCC-AGGCCCCAAGGAGAGTAGGG-GTCAGGCCTTCATGGTCGGTGTTGGAGAGCCCTGAACAGGATGTGACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90266557 208 - 90373283 CACACCCAGGGATCTGGCTATGGGAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGCCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTTGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGATATCTGGGCC-AGGCCCCAAGGAGAGT-GGG-GTCAGGCCTTCATGGTCGGTGTCGGGGAGCCCTGAACAGGATGTGAC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 24640 210 - 179258 TACACCCAGGGATCTGGCTATGGGAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGCCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGATATCTGGGCC-AGGCCCCAAGGAGAGTAGGG-GTCAGGCCTTCATGGTCGGTGTTGGAGAGCCCTGAACAGGATGTGACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5516943 210 - 5823884 CACACCCAGGGGTCTGGCTATGGGAAGGGGAGGGTGTCAGTACAGGAACTGCAGGGACTAGGCCAGGCTGGGT-GCACGGAGGCAAGGACAGGGTCGTGAGGCTGGTGCTTGATGAGAAAAGCTCAGTCTAGATATCTGGGCC-AGGCCCCAGGGAGAGTAGGG-GTCAGGCCTTCATGGTTGGTGTTGGAGAGCCCTGAACAGGATATGACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58170461 209 + 159171411 CCCACCTAGGGGTCTGGCTATGGGAATGGGAGAGTATTGG-GCAGGAGCCACAGGAACTAGGCCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTTGTGAGGCTGGTGCTTGATGAGCAAAGCTCAGTGTGGATATCTGGGCCTAAGCCCCAAGAGGAGTGGGGAATCAGGCCTTCAC-AG-GGTGGTGGAGAGCTCTGAACAGGATGTGACt i calJac3.chr5 C 0 I 277 s saiBol1.JH378156 16236462 209 + 16356641 CCCACCTACGGGTCTGGCTATGGGAAGGGAAGAGTATCAG-GCAGGAGCCACAGGGACTAGGCCAGGCTGGTT-GCACAGAGGCAAGGACAGGGTTGTGAGGCTGGTGCTTGATGAGCAAAGCTCAGTGTGGACGTCTGGGCCTAGGCCCCAAGAGGAGTGGGG-ATCAGGCCTTCATGGG-GGTGGTGGAGGGCTCTGAGCAGGATGTGACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1103369 209 + 1231380 CCCACCTAGGGGTCTGGCTATGGGAAGGGGAGAGTATCAG-GCAGGAGCCACAGGGACTAGACCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTTGTGAGGCTGGTGCTTGATGAGCACAGCTCAGTGTGGACATCTGGGCCTAGGCCCCAAGAGGAGTGGGG-ATCAGGCCTTCACGGG-GGTGGTGGAGAGCCCCGAGCAGGATGCGACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2633297 205 + 11732439 CCCACCTAGGGGT----CTATGGGAAGGGGAGGGTGTCAG-GCAGGAGCCACAGGGACCAGGCCAGGCTGGGT-GCACAGAGGCAAGGACAGGGTTGTGAGGCTGGTGCTTGATGAGCAAAGCTCAGGGTGGACGTCTGGGCCTAGGCCCCAAGAGGAGTGGGG-GTCGGGCCTTCACGGG-GGTGGTGGAGAGCTCCGAGCAGGGTGTGACT i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181755072 193 + 182113224 CATATATAAATGTCTGGTGATGGGAGAGCAAAGGT-TGAGTACCAAAGCT---GAAACTTGACCTTGATTGGTAGAAAAGATCAAAGAATAAGGTCATGA-TCTGGTGTACACAGAGGAAAG--CAGACTGGAT------GCC-AGGCTCTGGAGAATGTTAAG--TAAAGGTTCTGTGGGCAG-GATAGAGTGACCTG---AGATTGAGAGT i mm10.chr2 I 1727 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=910849.000000 s hg38.chr20_KI270870v1_alt 59649 90 + 183433 TGGTCTTCCCTGTGGAGAACTCAGGAGACTAGCTGGACCATTCAGGTATTTAAGGAGCAATGTCAGTGTGCCAGGAActctcggggagct s panTro5.chr20 66384470 90 + 66533130 TGGTCTTCCCTGTGGAGAACTCAGGAGACTAGCTGGACCATTCAGGTATTTAAGGAGCAATATCAGTGTGCCAGGAActctcggggagct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62065154 90 + 62195757 TGGTCTTCCCTGTGGAGAACTCAGGAGACTAACTGGACCATTCAGGTATTTAAGGAGCAATATCAGTGTGCCAGGAActctcggggagct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 450201 90 - 578057 TGGTCTTCCCTGTGGAGAACTCAGGAGACTAGCTGGACCATTCAGGTATTTAAGGAGCAATGTCAGAGTGCCAGGAActctcggggagct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109978042 90 - 110113093 TGGTCTTCCCTGTGGAGAACTCAGGAGACTAGCTGGACCATTCAGGTATTTAAGGAGCAATGTCAGTGTGCCAGGAACTCTCGGGGAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92705457 90 - 92844088 TGGTCTTCCCTGTGGAGAACTCGGGGGACTAGCTGGAGCATTCAGGTATTTAAGGAGCAATGTCAGTGTGCCAGGAACTCTTGGGGAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96372957 90 + 96509753 TGGTCTTCCCTGTGGAGAACTCGGGGGACTAGCTGGAGCATTCAGGTATTTAAGGAGCAATGTCAGTGTGCCAGGAACTCTTGGGGAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16843115 90 - 16982598 TGGTCTTCCCTGTGGAGAACTCGGGGGACTAGCTGGAGCATTCAGGTATTTAAGGAGCAATGTCAGTGTGCCAGGAACTCTTGGGGAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3645409 90 - 3785965 TGGTCTTCCCTGTGGAGAACTCGGGGGACTAGCTGGAGCATTCAGGTATTTAAGGAGCAATGTCAGTGTGCCAGGAACTCTTGGGGAGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90266765 86 - 90373283 TGGTCTTCCCTGTGGAGAA----GGGGACTAGCTGGAGCATTCAGGTATTTAAGGAGCAATGTCAGTGTGCCAGGAACTCTTGGGGAGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 24850 90 - 179258 TGGTCTTCCCTGTGGAGAACTCGGGGGACTAGCTGGAGCATTCAGGTATTTAAGGAGCAATGTCAGTGTGCCAGGAACTCTTGGGGAGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5517153 90 - 5823884 TGGTCTTTCCTGTGGAGAACTCGGGGGACTAGCTGGAGCATTCAGGTATTTAAGGAACAATGTCAGTGTGCCAGGAACTCCTGGGGAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58170947 90 + 159171411 tgGTCTTCCCTGTGGAGAACTCAGGAGACTGGTTGGGCCATTCTGGTATATAAGAAGCAATGTCAGTGTGCCAGGAgttcttatggagct i calJac3.chr5 I 277 C 0 s saiBol1.JH378156 16236671 90 + 16356641 TGGTCTGCCCCATGGAGAACTCGGGAGACTGGTTGGGCCATTCAGGTATATAAGAAGCAGTGTCAGTGTGCCAGGAGTTCTTGTGGAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1103578 90 + 1231380 TGGTCTGCCCTGTGGAGAACTCAGGAGACTGGTTGGGCCATTCAGGTATATAAGAAGCAATGTCAGTGTGCCAGGAGTTCTTGTGGAGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2633502 90 + 11732439 TGGTCTGCCCTGTGGAGAACTCGGGAGACTGGTTGGGCCATTCGGGTGTATAAGAAGCAACGTCAGTGTGCCAGGAGTTCTTGTGGAGTT i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181755265 85 + 182113224 TGGTGTTA-----GGAGACAGTAGGATACTGCATTCATCCAGTAGATATTTCAGGAGTAGGGCCAACATTCCAGGAACTCCCAGGGACCT i mm10.chr2 C 0 I 46 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=431257.000000 s hg38.chr20_KI270870v1_alt 59739 51 + 183433 tatatcccagtggaagagacagCTCACCTCTTTGAGCTTTCTGGCAAAGTC s panTro5.chr20 66384560 51 + 66533130 tatatcccagtggaagagacagCTCACCTCTTTGAGCTTTCTGGCAAAGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62065244 51 + 62195757 tatatcccagtggaagagacagCTCACCTCTTTGAGCTTTCTGGCAAAGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 450291 51 - 578057 tacatcccagtggaagagacagCTCACCTCTTTGAGCTTTCTGGCAAAGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109978132 51 - 110113093 TGTATCCCAGTGGAAGAGAGAGCTCACCTCTTTGAGCTTTCTGGCAAAGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92705547 51 - 92844088 TACATCCCAGTGGAAGAGAGAGTTCACCTCTTTGAGCTTTCTGGCAAAGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373047 51 + 96509753 TACATCCCAGTGGAAGAGAGAGTTCACCTCTTTGAGCTTTCTGGCAAAGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16843205 51 - 16982598 TACATCCCAGTGGAAGAGAGAGTTCACCTCTTTGAGCTTTCTGGCAAAGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3645499 51 - 3785965 TACATCCCAGTGGAAGAGAGAGTTCACCTCTTTGAGCTTTCTGGCAAAGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90266851 51 - 90373283 TACATCCCAGTGGAAGAGAGAGTTCACCTCTTTGAGCTTTCTGGCAAAGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 24940 51 - 179258 TACATCCCAGTGGAAGAGAGAGTTCACCTCTTTGAGCTTTCTGGCAAAGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5517243 51 - 5823884 TACATCCCAGAGGAAGAGAGAGTTCCCCTCTTTGAGCTTTCTGGCAAAGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58171037 48 + 159171411 cacattccagtggaagagac--CTCACC-CATTGAGCTTTCTTGCACAGTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16236761 48 + 16356641 CACATCCCAGGGGAAGAGAC--CTCACC-CATTGAGCTTTCTTGCATGGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1103668 48 + 1231380 CACATCCCAGTGGAAGAGAC--CTCACC-CACTGAGCTTTCTTGCATGGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2633592 47 + 11732439 CACATCCCAGTGGAAGAGAC--CTTACC-C-TTGAGCTTTCTTGCACGGTC i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e mm10.chr2 181755350 46 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=1735459.000000 s hg38.chr20_KI270870v1_alt 59790 188 + 183433 AAGGGTGCTGAGTGCTGTGTC---AGGGCC---ATCCAAAGGTCCTGAGATGAGTGGGACTTGGAGGAGGTCAGTCAGGACCAGCCTCGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGGGGGGCTCCTGGCAGGGAGCGGGGCGCAGAGGAGCACGAGGTCCTCAAGGTTCTCAGTGGT s panTro5.chr20 66384611 188 + 66533130 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---ATCCAAAGGTCCTGAGATGAGTGGGACTTGGAGGAGGTCAGTCAGGACCAGCCTCGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGGGGGGCTCCTGGCAGGGAGCGGGGCGCAGAGGAGCATGAGGTCCTCAAGGTTCTCAGTGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62065295 188 + 62195757 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---ATCCAAAGGTCCTGAGATGAGTGGGACTTGGAGGAGGTCAGTCAGGACCAGCCTCGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGGGGGGCTCCTGGCAGGGAGCGGGGCGCAGAGGAGCATGAGGTCCTCAAGGTTCTCAGTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 450342 188 - 578057 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---ATCCAAAGGTCCTGAGGTGAATGGGACTTGGAGGAGGTCAGTCAGGACCAGCCTCGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGGGGCGCTCCTGGCAGGGAGCAGGGTGCGGAGGAGCACAAGGTCCTCAGGGTTCTCAGTGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109978183 188 - 110113093 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---GTCCAAAGGTCCTGAGATGAGAGGGACTTGGAGGAGGTCAGTCAGGACCAGCCTCGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGGGGGGCTCCTGGCAGGGAGCAGGGTGCAGAGGAGCACGAGGTCCTCAAGGTTCTCAGTGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92705598 175 - 92844088 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---GTCCAAAGGTCCTGATATGAGTAGGACTTGGAGGAGGTCAGTCAGGACCAGGCTTGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGG-------------GGGAGCGGGGCACAGGGGAGCACGAGGTCCTCAAGGTTCTCAGTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373098 175 + 96509753 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---GTCCAAAGGTCCTGATATGAGTAGGACTTGGAGGAGGTCAGTCAGGACCAGGCTTGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGG-------------GGGAGCGGGGCACAGGGGAGCACGAGGTCCTCAAGGTTCTCAGTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16843256 175 - 16982598 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---GTCCAAAGGTCCTGATATGAGTAGGACTTGGAGGAGGTCAGTCAGGACCAGGCTTGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGG-------------GGGAGCGGGGCACAGGGGAGCACGAGGTCCTCAAGGTTCTCAGTGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3645550 175 - 3785965 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---GTCCAAAGGTCCTGATATGAGTAGGACTTGGAGGAGGTCAGTCAGGACCAGCCTTGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGG-------------GGGAGCGGGGCACAGGGGAGCACGAGGTCCTCAAGGTTCTCAGTGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90266902 175 - 90373283 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---GTCCAAAGATCCTGATATGAGTAGGACTTGGAGGAGGTCAGTCAGGACCAGACTTGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGG-------------GGGAGCGGGGCGCAGGGGAGCACGAGGTCCTCAAGGTTCTCAGTGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 24991 175 - 179258 AAGGGTGCTAAGTGCTGTGTC---AGGGCC---GTCCAAAGGTCCTGATATGAGTAGGACTTGGAGGAGGTCAGTCAGGACCAGCCTTGTTGTGG--GTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------GGCCTGG-------------GGGAGCGGGGCACAGGGGAGCACGAGGTCCTCAAGGTTCTCAGTGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5517294 177 - 5823884 AAGGGTGCTAAGTGCTGTGTC---GGGGCC---ATCCAAAGGTCCTGATATGAGTAGGACTTGGAGGAGGTCAGTCAGGACCAGCCTTGTTGTGGGTGTGTTGAAACACAGGAGTATCTG------TGTGGAGGA--------AGCCCGG-------------GGGAGCGGGGCGCAGGGGAGCACGAGGTCCTCCAGGTTCTCAGTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58171085 183 + 159171411 AAAGGTACTAAGTAC--TGTC---AGGGCT---GTCCGAAGGTCCTGAGGTGAGTGGGACTGGAAGGAGGTCAGTCAGGACCAGCCTTGTTGCAG--ATGTCGAAACACAGGAGTA--TA------TGTGGGGGA--------TGCCTAGGTGGCTCCTGTTGGGGAGTGGGGCTCAGAGGAGCACGAGGTACTTGAGGTTCTC-ATGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16236809 187 + 16356641 AAAGGAGCTACATACTGTGTC---AGGGCC---GTCCGAAGGTCCCGAGGTGAGTGGGACTGGGAGGAGGTCAGTCAGGACCAGCCTTGTTGTGG--GTGTCGAAACACAGGAGTACCTG------TGTGGGGGA--------GGCCTGGGTGGCTCCCGTCGGGGAGTGGGGCTCAGAGGAGCACGAGGTCCTTGAGGTTCTC-GTGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1103716 185 + 1231380 AAAGGTGCTGAGCACTGTGTC---AGGGCT---GTCCGAAGGTCCCGAGGTGAGTGGGACCAGGAGGAGGTCGGTCAGGACCAGCCTTGTTG-GG--GTGTCGAAACACAGGAGCGTCTG------TGT-GGGGA--------GGCCTGGGTGGCTCCTGTCGGGGAGTGGGGCTCAGGGGAGCACGAGGTCCTTGAGGTTCTC-GTGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2633639 187 + 11732439 AAAGGTGCTAAGTACTGTGTC---AGGGCC---GTCCGAAGGCCCCGAGGTGAGTGGGACTGGGAGGAGGTCAGTCAGGACCAGACTTGTTGCGG--CTGTCGAAACACAGGAGTACCTG------TGTGGGGGA--------GGCCTGGGTGGCTCCTGTCGGGGAGTGGGGCTCAGAGGAGCACGAGGTCCTTGGGGTTGTC-ATGGT i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181755396 186 + 182113224 GATGGTGTTGTGTACTATGCAAAGAGGGCTTGGGTCTGATAGCCCAGAAACAAGTAGAACTTGGAACAGGTCAGTGAGAGCCCACCTTGT-------GTATGGAAGTGTA-AAGTATCTGGTCACATGTGGCTGATAGCAGCTAGCTTGG-----------CAGAGAGTATGATGTGTTG-----TGAGGTCCTTGAAGTCCTGGATGGT i mm10.chr2 I 46 I 145 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=2068130.000000 s hg38.chr20_KI270870v1_alt 59978 235 + 183433 GGCATCAGGAGTGCCCAGGTCAACTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACATCGGCTGTGTATCCTTTGTATCTTCCAGAGGTACACAGCCCTCCCCAGCCGCCCTCCAACCTCAGGACAAAGTGTGGGTGTGCGTTTG---------------------------------------GCTCCTGCGTTCCCCTG------TCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGGTTCCCACTCCTCATCTTTCCAGGCCCGGGTCAG s panTro5.chr20 66384799 235 + 66533130 GGCATCAGGAGTGCCCAGGTCAACTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGAGGTACACAGCCCTCCCCAGCCGCCCTCCAACCTCAGGACAAAGTGTGGGTGTGCGTTTG---------------------------------------GCTCCTGCGTTCCCCTG------TCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGTTTCCCACTCCTCATCTTTCCAGGCCCGGGTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62065483 235 + 62195757 GGCATCAGGAGTGCCCAGGTCAACTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGAGGTACACAGCCCTCCCCAGCCGCCCTCCAACCTCAGGACAAAGTGTGGGTGTGCGTTTG---------------------------------------GCTCCTGCGTTCCCCTG------TCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGTTTCCCACTCCTCATCTTTCCAGGCCCGGGTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 450530 235 - 578057 GGCATCAGGAGTGCCCAGGTCAACTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGAGGTACACAGCCCTCCCCAGCCGCCCTCCAACCTCAGGACAAAGTGTGGGTGTGCGTTTG---------------------------------------GCTCCTGCGTTCCCCTG------TCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGGTTCCCACTCCTCATCTTTCCAGGCCCGGGTCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109978371 229 - 110113093 GGCATCAGGAGTGCCCAGGTCAACTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGGGGTACAAAGCCCTCCCCAGCCGCCCTCCAACCTCAGGACAAAGTGTGGGTGTGCGTTTT---------------------------------------GCTCCTGCGTTCCC--G------TCTCCTTTGTCCACGGGATGCCCTTGGCTGCCAGGAGGTTCCCA---CTCATCTTTCCAGG-CCGGGTCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92705773 222 - 92844088 TGCATCAGGAGTGCCCAGGTCATCTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGAGGTACACA-------------GCCCTCCAACCCCAGGACAATGTGTGGGAGTGTGTTTG---------------------------------------GCTCCTGCGTTCCCCTA------GCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGGTTCCCACTCCTCATCTTTCCAGGCCCAGGTCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373273 222 + 96509753 TGCATCAGGAGTGCCCAGGTCATCTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGAAGTACACA-------------GCCCTCCAACCCCAGGACAATGTGTGGGAGTGTGTTTG---------------------------------------GCTCCTGCGTTCCCCTA------GCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGGTTCCCACTCCTCATCTTTCCAGGCCCAGGTCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16843431 222 - 16982598 TGCATCAGGAGTGCCCAGGTCATCTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGAGGTACACA-------------GCCCTCCAACCCCAGGACAATGTGTGGGAGTGTGTTTG---------------------------------------GCTCCTGCGTTCCCCTA------GCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGGTTCCCACTCCTCATCTTTCCAGGCCCAGGTCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3645725 222 - 3785965 TGCATCAGGAGTGCCCAGGTCATCTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGAGGTACACA-------------GCCCTCCAACCCCAGGACAATGTGTGGGAGTGTGTTTG---------------------------------------GCTCCTGCGTTCCCCTA------GCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGGTTCCCACTCCTCATCTTTCCAGGCCCAGGTCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267077 222 - 90373283 TGCATCAGGAGTGCCCAGGTCATCTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTATATCCTTTGTATCTTCCAGAGGTACACA-------------GCCCTCTAACCCCAGGACAACGTGTGGGAGTGCATTTG---------------------------------------GCTCCTGCGTTCCCTTA------GCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGGTTCTCACTCCTCATCTTTCCAGGCCCAGGTCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 25166 222 - 179258 TGCATCAGGAGTGCCCAGGTCATCTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGAGGTACACA-------------GCCCTCCAACCCCAGGACAATGTGTGGGAGTGTGTTTG---------------------------------------GCTCCTGCGTTCCCCTA------GCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAGGTTCCCACTCCTCATCTTTCCAGGCCCAGGTCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5517471 222 - 5823884 TGCATCAGGAGTGCCCAGGTCGTCTTGTCCTGGGCAGAGGATGGGTTTAGAAGAGAACGTCGGCTGTGTATCCTTTGTATCTTCCAGAGGTACACA-------------GCCCTCCAACCCCAGGACAATATGTGGGAGTGCGTTTG---------------------------------------GCTCCGGTGTTCCCCTA------GCTCCTTTGTCCACAGGATGCTCTTGGCTGCCAGGAAGTTCCCACTCCTCATCTTTCCAGGCCCAGGTCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58171268 253 + 159171411 TGCATCAGCCGTGCCCAGGGGAAGTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACATTGGCAGTGTATCCTTTGCACCTTCCAGAGGTACATAGCCCAGCCCAGCCACCCTCCAAGCCCAGGACAAAATGTGGGTGTGCGTTTG--------------------------GCTCCGGCACTCTGCTCCTGCATTGCCCTGCAGGATGGTCCTTTGTCCTCAGGATGGTCTTGGCTGCCAGGAAGTTCCCACTCCTCAAC-TTCCAGGCCCAGATTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16236996 277 + 16356641 TGCATCAGCCGTGCCCAGGTGAAGTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACATCAGCCGTGTATCCTTTGTACCTTCCAGAGGCACGCAGCCCAGCCCAGCCACCCTCCAAGCCCAGGACAAAGTGTGGGTATGCGTTTGGCTCTGGCTTTCTGCTCCGGCGTTCTGCTCCGGCGTTCTGCTCCTGCGTTCCCCTGCCCG--GCTCCTTTGTCCTCAGGATGGTCTTGGCTGCCAGGAAGTTCCCACTCCTCATC-TTCCAGGCCCAGATTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1103901 249 + 1231380 TGCGTCAGCCGTGCCCAGGTGAAGTTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACATCAGCAGTGTATCCTCTGCACCTTCCAGAGGTACGCAGCCCAGCCCAGCCGCCCTCCAAACCCAGGACAAAGTGTGGGT-TGCGTTTG--------------------------GCTCCGGCGTTCTGCTCCTGTGTTCCCCTGCCCG--GTTCCTTCGTCCTCAGGATGGTCTTGGCTGCCAGGAAGTTCCCA-TCCTCATC-TTCCAGGCCCAGATTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2633826 248 + 11732439 TGCATCAGCCGTGCCCAGGTGAAGGTGTCCTGGGCAGAGGATGGGTTCAGAAGAGAACTTCAGCGGTGTATCC--TGAAACTTCCAGAGGTACGCGGCCCAGCCCAGCCGCCCTCCAAGCCCAGGACAAAGTGTGGGTGTGCGTTTG--------------------------GCTCCGGCATTCTGCTCCTGTGTTCCCCTGCCCG--GCTCCTTTGTCCTCAGGGTGGTCTTGGCTGCCAGGAAGTTCCCGCTCCTCATC-TTCCAGG-CCAGATTGG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e mm10.chr2 181755582 145 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 200858 2992 - 397369 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=238133.000000 s hg38.chr20_KI270870v1_alt 60213 20 + 183433 AGGCACTGAAGTCAGAAACA s panTro5.chr20 66385034 20 + 66533130 AGGCACTGAAGTCAGAAACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62065718 20 + 62195757 AGGCACTGAAGTCAGAAACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 450765 20 - 578057 AGGCACTGAAGTCAGAAACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109978600 20 - 110113093 AGGCACTGAGGTCAGAAACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92705995 20 - 92844088 AGGCACTGAAGTCAGAAACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373495 20 + 96509753 AGGCACTGAAGTCAGAAACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16843653 20 - 16982598 AGGCACTGAAGTCAGAAACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3645947 20 - 3785965 AGGCACTGAAGTCAGAAACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267299 20 - 90373283 AGGCACCGAAGTCAGAAACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 25388 20 - 179258 AGGCACTGAAGTCAGAAACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5517693 20 - 5823884 AGGCACTGAAGTCAGAAACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58171521 20 + 159171411 AGGCACTGAAGTCAGAAACA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16237273 20 + 16356641 AGGCACTGAAGTCAGAAACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104150 20 + 1231380 AGGCACTGAAGTCAGAAACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634074 20 + 11732439 AGGCACTGAAGTCAGAAACA i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 203850 20 - 397369 AGGCTCCAAAGCCAGATGCG i dasNov3.JH569290 I 2992 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47566354 1393 + 47698779 I e mm10.chr2 181755582 145 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=1365666.000000 s hg38.chr20_KI270870v1_alt 60233 143 + 183433 GAGGTGGCAATTCCAACCTAAAAGCACAAATTACAGACAAGTCTCCCTCCTGCAGGTTTCCAT-TTGCATCTGGCTTTTGTGTGGCACTAGAAGAGATCAGC--TTTTTGCAAGCATGGGGCTGATGAACGCAT--TTGCACAAAGGG s panTro5.chr20 66385054 143 + 66533130 GAGGTGGCAGTTTCAACCTAAAAGCACAAATTACAGACAAGTCTCCCTCCTGCAGGTTTCCAT-TTGCATCTGGCTTTTGTGTGGCACTAGAAGAGATCAGC--TTTTTGCAAGCATGGGGCTGATGAACGCAT--TTGCACAAAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62065738 143 + 62195757 GAGGTGGCAATTTCAACCTAAAAGCACAAATTACAGACAAGTCTCCCTCCTGCAGGTTTCCAT-TTGCATCTGGCTTTTGTGTGGCACTAGAAGAGATCAGC--TTTTTGCAAGCATGGGGCTGATGAACGCAT--TTGCACAAAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 450785 143 - 578057 GAGGTGGCAATTTCAACCTAAAAGCACAAATTACAGACAAGTCTCCCTCCTGCAGGTTTCCAT-TTGCACCTGGCTTTTGTGTGGCACTAGAAGAGATCAGC--TTTTTGCAAGCATGGGGCTGATGAACGCAT--TTGCACAAAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109978620 143 - 110113093 GAGGTGGCAATTTCAACCTAAAAGCACAAATTACAGACAAGTCTCCCTCCTGCAGGTTTCCAT-CTGCATCTGGCTTTTGTGTGGCACTAGAAGAGATCAGC--TTTTTGCAAGCATGGGGCTGATGAACACAT--TTGCACAAAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706015 140 - 92844088 GAGGTGGCAATTTCAACCTAAAAGCACAAATTACAGACAAGTCTTCCTCCTGCAGGTTTCCAA-TTGCAATGGGCTTTTGTGTGGCACTAGAAGAAACCAGC---TTTTGCAAGCATGGGGCTGATGAACACT----TGCACAAAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373515 140 + 96509753 CAGGTGGCAATTTCAACCTAAAAGCACAAATTACAGACAAGTCTTCCTCCTGCAGGTTTCCAA-TTGCAATGGGCTTTTGTGTGGCACTAGAAGAAACCAGC---TTTTGCAAGCATGGGGCTGATGAACACT----TGCACAAAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16843673 140 - 16982598 GAGGTGGCAATTTCAACCTAAAAGCACAAATTACAGACAAGTCTTCCTCCTGCAGGTTTCCAA-TTGCAATGGGCTTTTGTGTGGCACTAGAAGAAACCAGC---TTTTGCAAGCATGGGGCTGATGAACACT----TGCACAAAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3645967 140 - 3785965 GAGGTGGCAATTTCAACCTAAAAGCACAAATTACAGACAAGTCTTCCTCCTGCAGGTTTCCAA-TTGCAATGGGCTTTTGTGTGGCACTAGAAGAAACCAGC---TTTTGCAAGCATGGGGCTGATGAACACT----TGCACAAAGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267319 142 - 90373283 GAGGTGGCAATTTCAACCTAAAAGCACAAATTACAGATAAGTCTTCCTCCTGCAGGTTTCCAA-TTGCAATGGGCTTTTGTGTGGCACTAGAAGAAACCAGC---TTTTGCAAGTGTGGGGCTGATGAACACTT--CTGCACAAAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 25408 140 - 179258 GAGGTGGCAATTTCAACCTAAAAGCACAAATTACAGACAAGTCTTCCTCCTGCAGGTTTCCAA-TTGCAATGGGCTTTTGTGTGGCACTAGAAGAAACCAGC---TTTTGCAAGCATGGGGCTGATGAACACT----TGCACAAAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5517713 142 - 5823884 GAGGTGGCAATTTCAACCTAAAAGCGCAAATTACAGATAAGTCTCCCTCCTGCAGGTTTCCAA-TTGCAACGGGCTTTTGTGTGGCACTAGAAGAAACCAGC---TTTTGCAAGCATGGGGCTGATGAACACTT--TTGCACAAAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58171541 142 + 159171411 GAGGTGGCAGTTGCAACCTAAAAGCGCACACTACAGACAAGTCTCTCTCCTGCAGGGTTCCAT-TTGCATCTGCCCTCTGTGTGGCACCAGCAGAGGCCAGC--TTTCTGCGAGCAT-GGGCTGATTAATACAT--TTGCACAAAGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16237293 142 + 16356641 GAGCTGGCAATTGCAACCTAAAAGCACACACTGCAGACACGTCTCCCTCCTGCAGGGTTCCAT-TTGCATCTGCCTTCTGTGTGGCACTGGAAGAGGCCAGC--TTTCTGCGAGCAT-GGGCTGATTAACACAT--TTGCACAAAGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104170 142 + 1231380 GAGGTGGCAATTGCAACCTAAAAGCACACACTACAGACAAGTCTCCCTCCTGCAGGGTTCCAT-TTGCATCTGCCTTCCGTGTGGCACTGGAAGAGGCCAGC--TTTCTGCGACCGT-GGGCTGATTAACACAT--TTGCACAAAGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634094 142 + 11732439 GAGGTGGCAATTGCAACCTAAAAGCACACACTACAGACAAGTCTCCCTCCTGCAGGGTTCCAT-TTGCATCTGCCTTCTGTGTGGCACCAGAAGAGGCCAGC--TTTCTGCGAGCAT-GGGCTGATTAACACAT--TTGCACAAAGGG i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47567747 143 + 47698779 GGGGTGAAGGTGCCCACCTAAGAGCACCAGTCACGGACAGGTC-CCCTCCTGCGGGTGTCCCA-TGGCATCTGCCTCTGGCCCGGCTTGGGGACAAGTCAGCTCTTCCTGCAGACACTGAA--GACGACCCCGTAGTTGCCCGAGGG- i canFam3.chr24 I 1393 C 0 s dasNov3.JH569290 203870 118 - 397369 GAGGTGGCAGGCATCCCCTAAAGGCACAAGCTGCAGA-AGGTCTCCTTCCTGCTGGCTTCCCCGCGGCACCTGCCTTCTGCCTGGCCCT-----------------------------GGGCTTGGGGACAGTTAGTCACACGGAGGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181755582 145 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=980035.000000 s hg38.chr20_KI270870v1_alt 60376 94 + 183433 AGACGGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCGTCTGTGATTTGGAAACCGGTGGCAGA s panTro5.chr20 66385197 94 + 66533130 AGACGGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCGTCTGTGATTTGGAAACCGGTGGCAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62065881 94 + 62195757 AGACGGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCGTCTGTGATTTGGAAACCGGTGGCAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 450928 94 - 578057 AGACGGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCGTCTGTGATTTGGAAACCGGTGGCAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109978763 94 - 110113093 AGACGGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCTTCTGTGATTTGGAAACCGGTGGCAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706155 94 - 92844088 AGACAGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCTTCTGTGACTTGGAAACCAGTGGCAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373655 94 + 96509753 AGACAGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCTTCTGTGACTTGGAAACCAGTGGCAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16843813 94 - 16982598 AGACAGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCTTCTGTGACTTGGAAACCAGTGGCAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646107 94 - 3785965 AGACAGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTAAGATCTTCTGTGACTTGGAAACCAGTGGCAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267461 100 - 90373283 AGACAGCGG-AGTAGCAGGAGTTTGC--AAGCTGCTTCTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCTTCTGTgacttggaaaccggtggcaga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 25548 94 - 179258 AGACAGCGG-AGTAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTAGGATCTTCTGTGACTTGGAAACCAGTGGCAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5517855 96 - 5823884 AGACAGCAG-AGTAGCAGGAGTTTGCAAAAG------CTG----CTTCATTAACTTGGAGCC-AGTGGAATG----------TCTGGGATCTTCTGTgacttggaaaccggtggcaga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58171683 94 + 159171411 AGATGGTGG-AGAAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-GATGGTATG----------TCTGAGATTTTCTGTGATTTGGAAACCAGTGGCCGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16237435 94 + 16356641 AGATGGTGG-AGAAGCAGGAGTTTGC--AAG------CTG----CTTCATTAACTTGGAGCC-AGTGGGATG----------TCTGGGATCTTCTGTGATTTGGAAACCAGTGGCGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104312 94 + 1231380 AGATGGTGG-AGAAGCAGGAGTTTGC--AAG------CTG----CTTCGTTAACTTGGAGCC-AATGGGATG----------TCTGGGATCTTCTGTGATTTGGAAACCAGTGGCAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634236 104 + 11732439 AGATGGTGG-AGAAGCAGGAGTTTGC--AAG------CTG----CTTCGTTAACTTGGAGCC-AGTGGGATGTCTGGGATCCTCTGGGATCCTCTGCGATTTGGAAATCAGTGGCAGA i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181755727 80 + 182113224 AGGTAGCAG-AGT-GTGGAAGTTTGG--AAA------CTATTTTTTTTTTTAATTTGGAGTC-TAAAGCAGT----------TACAG-----CTTGTGATTTAGAA------------ i mm10.chr2 I 145 C 0 s canFam3.chr24 47567890 82 + 47698779 AGTCGGCGGTGGTGGGGGGCGGGCGC--GAGGGG---CTG----CCTCAT--------------GTGGG--G----------TCCAGACTCTTCCG-GCCTTAGAAGCAAGTGTCGGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 203988 89 - 397369 AGTGGCTGG-CTTGGCAGGACCGTGC--AGA------CTT----CC-CACTAATGTGAAGCCTGGTGGGGTT----------TCGGGG-----TTTTGACATGGACGCAGGTTGTAGA i dasNov3.JH569290 C 0 I 1851 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56810215 7534 + 57149010 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=1544300.000000 s hg38.chr20_KI270870v1_alt 60470 163 + 183433 ATGTTCCCGCGTTTCTGGTCCTCATCAGTCAGGTAGGTTGAGGGGAGCCCAAGACGAGCTTGTGGCTGCAGCGAGGGTGCAGGAT--------GGGTACACATCTCGGTGGTCCAGCTGGGTCTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCAGGGC--TT s panTro5.chr20 66385291 163 + 66533130 ATGTTCCCGCGTTTCTGGTCCTCATCAGTCAGGTAGGTTGAGGGGAGCCCAAGACGAGCTTGTGGCTGCAGCGAGGGTGCAGGAT--------GGGTACACGTCTCGGTGGTCCAGCTGGGTCTCAGCTACCTTGAATCTGACCCACAGGCTTTGTGTGGTCTCAGGGC--TT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62065975 163 + 62195757 ATGTTCCCGCGTTTCTGGTCCTCATCAGTCAGGTAGGTTGAGGGGAGCCCAAGACGAGCTTGTGGCTGCAGCGAGGGTGCAGGAT--------GGGTACACGTCTCGGTGGTCCAGCTGGGTCTCAGCTACCTTGAATCTGACCCACAGGCTTTGTGTGGTCTCAGGGC--TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451022 163 - 578057 ATGTTCCCGCGTTTCTGGTCCTCATCAGTCAGGTAGGTTGAGGGGAGCCCAAGACGAGCTTGTGGCTGCAGCGAGGGTGCAGGAT--------GGGTGCACATCTCGGTGGTCCAGCTGGGTCTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCAGGGC--TT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109978857 163 - 110113093 ATGTTCCCACGTTTCTGGTCCTCATCAGTCAGGTAGGTTGAGGGGAGCCCAAGACAAGCTTGTGGCTGCGGTGAGGGTGCAGGAT--------GGGTACACATCTCGGGGGTCCAGCTGGGTCTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCAGGGC--TT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706249 163 - 92844088 ATGTTCCCATGTTTCTGGTCCTCTTCAGTCAGGTAGGTTGGGGGGCGCCCAAGACAAGCTTGTGGCTGCAGTGAGGGTGCAGGTT--------GGGTACACATCTCGGTGGTCCAGCTGGGTGTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCAGGGC--TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373749 163 + 96509753 ATGTTCCCATGTTTCTGGTCCTCTTCAGTCAGGTAGGTTGGGGGGCGCCCAAGACAAGCTTGTGGCTGCAGTGAGGGTGCAGGTT--------GGGTACACATCTCGGTGGTCCAGCTGGGTGTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCAGGGC--TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16843907 163 - 16982598 ATGTTCCCATGTTTCTGGTCCTCTTCAGTCAGGTAGGTTGGGGGGCGCCCAAGACAAGCTTGTGGCTGCAGTGAGGGTGCAGGTT--------GGGTACACATCTCGGTGGTCCAGCTGGGTGTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCAGGGC--TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646201 163 - 3785965 ATGTTCCCATGTTTCTGGTCCTCTTTAGTCAGGTAGGTTGGGGGGCGCCCAAGACAAGCTTGTGGCTGCAGTGAGGGTGCAGGAT--------GGGTACACATCTCGGTGGTCCAGCTGGGTGTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCAGGGC--TT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267561 163 - 90373283 atgttcccacgtttctggtcctctTCAGTCAGGTAGATTGAGGGGCGCCCAAGACAAGCTTGTGGCTGCAGTGAGGGTGCAGGAT--------GGGTACACATCTCGGTGGTCCAGCTGGGTGTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCAGGGC--TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 25642 163 - 179258 ATGTTCCCATGTTTCTGGTCCTCTTCAGTCAGGTAGGTTGGGGGGCGCCCAAGACAAGCTTGTGGCTGCAGTGAGGGTGCAGGAT--------GGGTACACATCTCGGTGGTCCAGCTGGGTGTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCAGGGC--TT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5517951 163 - 5823884 atgttcccacatttctggtcctctTCAGTCAGGTAGGTTGAGGGGCGCCCAAGACAAGCTTGTGGCTGCAGTGAGGGTGCAGGAT--------GGGGACACATCTCGGTGGTCCAACTGGGTGTCAGCTACCTTGAATCTGACCCACGGGCTTTGTGTGGTCTCGGGGC--TT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58171777 157 + 159171411 GTGTCCCCATGTTTCTGGTCCTCATCAGTCGGGGAGGTTGAGGGGAGCCT--GACAGGCTTGTGGCTGCAGTGAGGGTGCAGAGT--------AGGTGCACATCTCAAC-ATCCA-CCGGGTCTCAGCTGCCTTGAATCCGACCCATGGGCTTTGCATGGTCTCAGG----CC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16237529 161 + 16356641 GCGTCCCCATGTTTCTGGTCCTCACCAGTCAGGGAGGTTGAGGGGAACCCAAGACAGGCTTGTGGCTGCAGTGAGGGTGCAGAGT--------AGGTGTGCATCTCAGC-ATCCA-CCGGGTCTCAGCTGCCTCGAATCTGACCCATGGGCTTTGCATGGTCTCAGGGC--CT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104406 161 + 1231380 GTGTCCCCATATTTCTGGTCCTCATCAGTCAGGGAGGTTGAGGGGAGCCCAAGACAGGCCTGTGGCTGCAGTGAGGGTGCAGAGT--------AGGTGCGCATCTCAGC-ATCCA-CCGGGTCTCAGCTGCCTCGAATCTGACCCATGGGCTTTGCATGGTCTCAGGGC--TT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634340 163 + 11732439 GTGTCCCCATGTTTCTGGTCCTCATCAGTCAGGGAGGTTGAGGGGAGCCCAAGGCAGGCCTGTGGCTGCCGTGAGGGTGCAGAGT--------AGGTGCACGTCTCGGC-ATCCA-CCGGGTCTCAGCTGCCTTGAATCCGACCCATGGGCTTTACGTGGTCTCAGGGCTTGT i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181755807 121 + 182113224 -----------TTTCTAG---------GTCATGTAGACTGGAGGAAGCTCAAAGCAAGAGCATGGTCATAG-GAGAGTACAG------------------TAGCTCAGG-------TCAGATCTGAGCTACTGTT-GTTTGACCA--GGGTGCTGTATGGCTTCAGGCC--T- i mm10.chr2 C 0 C 0 s canFam3.chr24 47567972 121 + 47698779 ATA-------------GG--------AGTCAGGCTG-----GGCCGGTCCAGGAC----------CAGCAGGGGAGGAGCAGGGCACGGCATGGGGGGTGCGT---GGACGTCCAGTC--GTCCCGGCAGCCTCGGATCTGACCCCAGGGCTCCGTG-GGTCT---------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e otoGar3.GL873542 22797994 1560 + 22939663 I a score=337504.000000 s hg38.chr20_KI270870v1_alt 60633 40 + 183433 GTGTGTGTGTGTTTGGTCCGCTGTGTACCTG-----GTGTGC-ACA s panTro5.chr20 66385454 40 + 66533130 GTGTGTGTGTGTTTGGTCCACTGTGTACCTG-----GTGTGC-ACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066138 40 + 62195757 GTGTGTGTGTGTTTGGTCCACTGTGTACCTG-----GTGTGC-ACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451185 40 - 578057 GTGTGTCTGTGTTTGGTCCGCTGTGTACCTG-----GTGTAC-ACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979020 40 - 110113093 GTGTGTGTGTGTTTGGTCCCCTGTGTACCTG-----GTGTGC-ACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706412 36 - 92844088 GTG----TGTATTTGGTCCCCTGTGTACCTG-----GTGTGC-ACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373912 36 + 96509753 GTG----TGTATTTGGTCCCCTGTGTACCTG-----GTGTGC-ACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844070 36 - 16982598 GTG----TGTATTTGGTCCCCTGTGTACCTG-----GTGTGC-ACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646364 36 - 3785965 GTG----TGTATTTGGTCCCCTGTGTACCTG-----GTGTGC-ACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267724 36 - 90373283 GTG----TGTATTTGGTTCCCTGTGTACCTG-----GTGTGC-ACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 25805 36 - 179258 GTG----TGTATTTGGTCCCCTGTGTACCTG-----GTGTGC-ACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518114 36 - 5823884 GTG----TGTGTTTGGTCCCCTGTGTACCTG-----GTGTGC-ACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58171934 40 + 159171411 TTGCGTGTGTGTCTGGTGCCCCACGTACCTG-----GAGTGC-ACA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16237690 40 + 16356641 GTGCGTGTGTGTCTGGTGCCCCATGTACCTG-----GTGTGC-ATA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104567 40 + 1231380 GTGTGTGTGTGTCTGGCGCCCCACGAACCTG-----GTGTGC-ACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634503 39 + 11732439 GTGTGTGTGTGTCTGGCG-CCCACGTACCTG-----GTGTGC-ACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22799554 40 + 22939663 GTGTGTGTGCGTCTTATCTTCTAGGTACCTC-----GTGTGT-ACA i otoGar3.GL873542 I 1560 I 479 s mm10.chr2 181755928 23 + 182113224 --------GTATGTGG----------AACTG-----GTGTGCTACA i mm10.chr2 C 0 C 0 s canFam3.chr24 47568093 34 + 47698779 ----------ATCCGG-CCCCCACCTCCCTGGCCCCGTGTGT-GCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I a score=241309.000000 s hg38.chr20_KI270870v1_alt 60673 29 + 183433 CATTGCCTGTCACGTGGGTCTCTG-----------TTGGA s panTro5.chr20 66385494 29 + 66533130 CATTGCCTGTCACGTGGGTCTCTG-----------TTGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066178 29 + 62195757 CATTGCCTGTCACGTGGGTCTCTG-----------TTGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451225 29 - 578057 CATTGCCTGTCACGTGTGTCTCTG-----------TTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979060 29 - 110113093 CATTGCCTGTCATGTGGGTCTCTG-----------TTGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706448 29 - 92844088 CATTGCCTGTCATGTGGATCTGTG-----------TTGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373948 29 + 96509753 CATTGCCTGTCATGTGGATCTGTG-----------TTGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844106 29 - 16982598 CATTGCCTGTCATGTGGATCTGTG-----------TTGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646400 29 - 3785965 CATTGCCTGTCATGTGGATCTGTG-----------TTGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267760 29 - 90373283 CATTGCCTGTCATGTGGATCTCTG-----------TTGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 25841 29 - 179258 CATTGCCTGTCATGTGGATCTGTG-----------TTGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518150 29 - 5823884 CATTGCCTGACATGTGGATCTCTG-----------TTGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58171974 27 + 159171411 CACTGCCTGTCCTGTGGGTC--TG-----------CTGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16237730 27 + 16356641 CACTACCTGTCCCGTGGGTC--TG-----------CTGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104607 27 + 1231380 CACTGCCTGTCCTGTGGGTC--TG-----------CTGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634542 27 + 11732439 CGCTGCCTGTCCTGTGGGTC--TG-----------CTGGA i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181755951 34 + 182113224 ------CAATTCCATGGGTCTGTGGATGGGTTCTACTGGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47568127 27 + 47698779 CAGTGTGTGCTTCGTGCATGTTTG-----------AGG-- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e otoGar3.GL873542 22799594 479 + 22939663 I a score=1753881.000000 s hg38.chr20_KI270870v1_alt 60702 178 + 183433 AGCTCTTGCCCGTCGGTTCTTCATGTGGTGCTGTCGGACATCTACTGGTCTTTGAGCCTCCAAGTCTGTGTTGGCTGCTGCAGGTCGGGGCCTGGGACTTTGTGTACCAGTGACGTGGCCCCACTGAGGCCCCG-TTCC-----TGACTCAGCCATGCTGTCATGGCCCTCAGAAAAGATCTAT s panTro5.chr20 66385523 178 + 66533130 AGCTCTTGCCCGTCGGTTCTTCATGTGGTGCCGTCGGACATCTACTGGTCTTTGAGCCTCCAAGTCTGTGTTGGCTGCTGCAGGTCGGGGCCTGGGACTTTGTGTACCAGTGACGTGGCCCCACTGAGGCCCCG-TTCC-----TGACTCAGCCATGCTGTCATGGCCCTCAGAAAAGATCTAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066207 178 + 62195757 AGCTCTTGCCCGTCGGTTCTTCATGTGGTGCCGTCGGACATCTACTGGTCTTTGAGCCTCCAAGTCTGTGTTGGCTGCTGCAGGTCGGGGCCTGGGACTTTGTGTACCAGTGACGTGGCCCCACTGAGGCCCCG-TTCC-----TGACTCAGCCATGCTGTCATGGCCCTCAGAAAAGATCTAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451254 178 - 578057 AGCTCTTGCCCGTCGGTTCTTCATATGGTGCTGTCGGACATCTACTGGTCTTTGAGTCTCCAAGTCTGTGTTAGCTGCTGCAGGTCGGGGCCTGGGACTCTGTGTACCAGTGACGTGGCCCCACTGAGGCCCCG-TTCC-----TGACTCAGCCATGCTGTCATGGCCCTCAGAAAAGATCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979089 178 - 110113093 AGCTCTTGCCCTTCGGTTCTTCATGTGGTGCTGTGGGACATCTAGTGGTCTTTGAGCCTTCAAGTCTGTGTTGGCTGCTGCAGCTTGGGGCCTGGGGCTTTGTGTACCAGTGACACGGCCCCACTGAGGCCCCG-TTCC-----TGACTCAGCCATGCTGTCATGGCCCTCAGAAAAGATCTAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706477 178 - 92844088 AGCTCCTGCCCTTCAGTTCTTCATGTGGTGCTGTGGGACATCTGGTGGT-TTTGAGCCTCCAAGTCTGTGTTGGCTGCTGCAGGTCAGGGCCTGGGACTTTGTGTACCAGTGACATGGCTCCACTGGGACCCCATTTCC-----TGACTCAGCCATGCTGTCACGGACCTCAGAAAAGATCTAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96373977 177 + 96509753 AGCTCCTGCCCTTCAGTTCTTCATGTGGTGCTGTGGGACATCTGGTGGT-TTTGAGCCTCCAAGTCTGTGTTGGCTGCTGCAGGTCAGGGCCTGGGACTTTGTGTACCAGTGACATGGCTCCACTGGGACCCCA-TTCC-----TGACTCAGCCATGCTGTCACGGACCTCAGAAAAGATCTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844135 177 - 16982598 AGCTCCTGCCCTTCAGTTCTTCATGTGGTGCTGTGGGACATCTGGTGGT-TTTGAGCCTCCAAGTCTGTGTTGGCTGCTGCAGGTCAGGGCCTGGGACTTTGTGTACCAGTGACATGGCTCCACTGGGACCCCA-TTCC-----TGACTCAGCCATGCTGTCACGGGCCTCAGAAAAGATCTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646429 177 - 3785965 AGCTCCTGCCCTTCAGTTCTTCATGTGGTGCTGTGGGACATCTGGTGGT-TTTGAGCCTCCAAGTCTGTGTTGGCTGCTGCAGGTCAGGGCCTGGGACTTTGTGTACCAGTGACATGGCTCCACTGGGACCCCA-TTCC-----TGACTCAGCCATGCTGTCACGGACCTCAGAAAAGATCTAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267789 177 - 90373283 AGCTCCTGCCCTTCAGTTCTTCATGTGGTGCTGTGGGACATCTGGTGGT-TTTGAGCCTCCAAGTCCGTGTTGGCTGCTGCAGGTCGGGGCCTGGGACTTTGTGTACCAGTGACATGGCTCCACTGGGACCCCA-TTCC-----TGACTCAGCCATGCTGTCACGGACCTCAGAAAAGATCTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 25870 177 - 179258 AGCTCCTGCCCTTCAGTTCTTCATGTGGTGCTGTGGGACATCTGGTGGT-TTTGAGCCTCCAAGTCTGTGTTGGCTGCTGCAGGTCAGGGCCTGGGACTTTGTGTACCAGTGACATGGCTCCACTGGGACCCCA-TTCC-----TGACTCAGCCATGCTGTCACGGACCTCAGAAAAGATCTAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518179 177 - 5823884 AGCTCTTACCCTTCGGTTCTTCGTGTGGTGCTGTGGGACATCTGGTGGT-TTTGAGCCTCCAAGTCCGTGTTGGCTGCTGCAGGTCGGGGCCTGGGACTTTGTGTACCAGTGACATGGCTCTACTGGGACCCCA-TTCC-----TGACTCAGCTATGCTGTCACGGACCTCAGAAAAGATCTAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172001 174 + 159171411 AGCTCTCACCCTTCAGTACTTCATGTGGGGCTGTGGGACATCTAGTGG--TCTGAGTCTTAAAGTCTGTGTTGGCTGATGCAGGTTGGGGCCTGGGACTC--TGTACCAGTGACACGGCTCCACCGAGGCCCTG-TTCC-----TGACGCAGCCATGCTGCCATGGACCTCAGAAAAGCTCTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16237757 161 + 16356641 AGCTCTCGCCCTTCAGTACTTCATGTGGGGCTGTGAGACATCTAGTGG--TCT--GTCTTAAAGTCTGTGTTGGCTGATGCGGGTTGGGGCCTGGGACTC--TGTAC-----------CTCCGCCGAGGCCCTG-TTCC-----TGATGCAGCCATGCTGCCATGGACCTCAGAAAAGCTCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104634 172 + 1231380 AGCTCTCGACCTTCGGTACTTCATGTGGGGCTGTGGGACATCTAGTGG--TCTGAGGCTTAAAGTCTGTGTTGGCTGATGCAGGTTGGGGCCTGGGACTC----TACCAGTGACACGGCTCCACCGAGGCCCTG-TTCC-----TGACGCAGCCATGCTGCCATGGAGCTCAGAAAAGCTCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634569 168 + 11732439 AGCTCTCACCCTGCAGTACTTCACGTGTGGCTGTGGGATGTCTAGTGG--TCTGCGTCTTAAAGTCTGTGTTGGCTGATGCAGGTTGGGGCCTGGGACTC--TGTAC------CACGGCTCCACTGAGGCCCTG-TTCC-----CGACGCAGCCATGCTGCCATGGACCTCAGAAGGGCTCTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22800073 177 + 22939663 AGCCTTTTCCTTTGTGTGCCACACGTGATGCTGTGGGTCATCAAGCAGCCTTCCAGCCTCCAC-TCTGACTTGGATGATGCAGGACAGGACTGAAGACTTTGTGTAATGGTGATGTGGCACCACTGTGGCCCAT-TTTC-----TGAGTAGGCCACACACACGCGGACCTTAGAAAAGCTATGT i otoGar3.GL873542 I 479 I 440 s mm10.chr2 181755985 178 + 182113224 GGCTTGGGCTATTATATTCTTGGTGTAAAGTTTCAGGACATCTAACATC-TTTGATTCTGCAAGTGTGCTTTGGTTGATATGGATCAGAGCCTGGGATTATATGCACCAGTGAGAGGTCTCTACTGGGGTCTGA-TTCTGGTGATGACTCAGTCATATTGCCAGGGGTCTCAGAAAAGCC---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47568154 112 + 47698779 AGCACC---------------CATGTCGC---------------------TTCGAGCTTCCAGGTCCGTCGTGGCTGATGGATGGGGGGG-------------GTCCCA-----------CCCCCCAGGCCTCC-TCCC-----CCAGGCCTCC------TCTGGGACCCCGAAGAAGTCCTTT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I a score=268254.000000 s hg38.chr20_KI270870v1_alt 60880 28 + 183433 CATTTCTTTGATCCTGTAAAACAAGTAA s panTro5.chr20 66385701 28 + 66533130 CATTTCTTTGAGCCTGTAAAACAAGTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066385 28 + 62195757 CATTTCTTTGAGCCTGTAAAACAAGTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451432 28 - 578057 CATTTCTTTGAGCCTGTAAAACAAGTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979267 28 - 110113093 CATTTCTTTGAGCCTGTAAAACAAGTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706655 28 - 92844088 CATTTATTTGAGCCTGTAAAACAAGTAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374154 28 + 96509753 CATTTATTTGAGCCTGTAAAACAAGTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844312 28 - 16982598 CATTTATTTGAGCCTGTAAAACAAGTAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646606 28 - 3785965 CATTTATTTGAGCCTGTAAAACAAGTAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267966 28 - 90373283 CATTTATTTGAGCCTGTAAAACAAGTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26047 28 - 179258 CATTTATTTGAGCCTGTAAAACAAGTAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518356 28 - 5823884 CATTTCTTTGAGCCTGTAAAACAAGTAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172175 28 + 159171411 CACTTCTTGGAGCCCAGAAAACAGGTGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16237918 28 + 16356641 CACTTCTTGGAGTCCATAAAACAGGTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104806 28 + 1231380 CACTCCTTGGAGCCCATAAAACAGGTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634737 28 + 11732439 CACTTCTTGGAGCCCATAAAACAGGTGA i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181756163 28 + 182113224 CACTAACCTGACCACATTCAATAGATCA i mm10.chr2 C 0 C 0 s canFam3.chr24 47568266 28 + 47698779 AACTTTCCTGAGCCCATACCACAGGTGG i canFam3.chr24 C 0 I 110 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e otoGar3.GL873542 22800250 440 + 22939663 I a score=548445.000000 s hg38.chr20_KI270870v1_alt 60908 92 + 183433 ATTCAGTCTTCCTGTGAGGCACGGTGATGATTCACTGGAATCATCCCAGTGTGTAA-------------------------GGGTACTTCCT-CCTG-CCGGGACT-GCCAGGCGGGACG-- s panTro5.chr20 66385729 92 + 66533130 ATTCAGTCTTCCTGTGAGGCGCGGTGATGATTCACTGGAATCATCCCAGTGTGTAA-------------------------GGGTACTTCCT-CCTG-CCGGGACT-GCCAGGCGGGATG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066413 92 + 62195757 ATTCAGTCTTCCTGTGAGGCGCGGTGATGATTCACTGGAATCATCCCAGTGTGTAA-------------------------GGGTACTTCCT-CCTG-CCGGGACT-GCCAGGCGGGATG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451460 92 - 578057 ATTCAGTCTTCCTGTGAGGCGCGGTGATGATTCACTGGAATCATCCCAGTGTGTAA-------------------------GGGTACTTCCT--CTG-CCGGGACTGGCCAGGCGGGATG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979295 94 - 110113093 ATTCAGTCTTCCTGTGAGGCGCGGTGATAATTCACTGGAATCCTCATAGTGTGTAA-------------------------GGGTACTTCCTTTCTGCCCGGGACT-GCCAGGCGGGATG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706683 105 - 92844088 ATTCAATCTTCCTGTGAGGTGCGGTGATGATTCACTGGAACCATCGTGGTGTGTGA-------GGGGC-----GCTTGCTGGGGCTCTTCCT-CCTG-CCGGGACT-GCCAGGTGGGACA-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374182 105 + 96509753 ATTCAATCTTCCTGTGAGGTGCGGTGATGATTCACTGGAACTATCGTGGTGTGTGA-------GGGGC-----GCTTGCTGGGGCTCTTCCT-CCTG-CCGGGACT-GCCAGGTGGGACA-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844340 105 - 16982598 ATTCAATCTTCCTGTGAGGGGCGGTGATGATTCACTGGAACCATCGTGGTGTGTGA-------GGGGC-----GCTTGCTGGGGCTCTTCCT-CCTG-CCGGGACT-GCCAGGTGGGACA-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646634 105 - 3785965 ATTCAATCTTCCTGTGAGGTGCGGTGATGATTCACTGGAACCATCGTGGTGTGTGA-------GGGGC-----GCTTGCTGGGGCTCTTCCT-CCTG-CCGGGACT-GCCAGGTGGGACA-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90267994 105 - 90373283 ATTCAATCTTCCTGTGAGGTGCGGTGATGATTCACTGGAACCATCGTGGTGTGTGA-------GGGGT-----GCTTGCTGGGGCTCTTCCT-CCTG-CCGGGACC-GCCAGGTAGGACA-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26075 105 - 179258 ATTCAATCTTCCTGTGAGGTGCGGTGATGATTCACTGGAACCATCGTGGTGTGTGA-------GGGGC-----GCTTGCTGGGGCTCTTCCT-CCTG-CCAGGACT-GCCAGGTGGGACA-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518384 105 - 5823884 ATTCAATCTTCCTGTGAGGTGCGGTGATGATTCACTGGAACCATCGTGGTGTGTGA-------GGGGT-----GCTTGCTGGGGCTCTTCCT-CCTG-CCGGGACC-GCCAGGCGGGACA-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172203 68 + 159171411 ATTCAGTCTTCCT---AAGCGTGGTGATGATTCACTGGAAT-------GTGTGTGA-------------------------GG----------GGTG-C-----TT-GCTGGGCGGGATG-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16237946 65 + 16356641 ATTCAGTCTTCCT---AAGCGTGG---TGATTCACTGGAAC-------GTGCGTGA-------------------------GG----------GGTG-C-----TT-GCTGGGTGGGATG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104834 68 + 1231380 ATTCAGTCTTCCT---AAGTGTGGTGATGATTCACTGGAAT-------GTGGGTGA-------------------------GG----------GGTG-C-----TT-GCTGGGTGGGATG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634765 68 + 11732439 ATTCAGTCTTCCT---AAGCGTGGTGGTGATTCACTGGAAT-------GTGTGTGA-------------------------GG----------GGTG-C-----TT-GCTGGGCGGGATG-- i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181756191 115 + 182113224 AGTCA--CCACAT-TGAAACATACTGATGATTTGTTGGGATATTGCCTGGTTGTTGCCTTCCAGGGGCTAGGTAATAGCCAAAGCACTTCAT-GCCA-C-TACACT-ACTATGCATTATACT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568294 110 + 47698779 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e otoGar3.GL873542 22800250 440 + 22939663 I a score=267380.000000 s hg38.chr20_KI270870v1_alt 61000 27 + 183433 GCTT-CCTGCAGACTCAGA--GGGT-CCAAG s panTro5.chr20 66385821 27 + 66533130 GCTT-CCTGCAGACTCAGA--GGGT-CCAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066505 27 + 62195757 GCTT-CCTGCAGACTCAGA--GGGT-CCAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451552 27 - 578057 GCTT-CCTGCAGACTCAGA--GGGT-CCAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979389 29 - 110113093 GCTTCCCTGCAGACTCAGA--CGGTCCCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706788 27 - 92844088 GCTT-CCTGCAGACTCAGC--GGGT-CCAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374287 27 + 96509753 GCTT-CCTGCAGACTCAGC--GGGT-CCAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844445 27 - 16982598 GCTT-CCTGCAGACTCAGC--GGGT-CCAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646739 27 - 3785965 GCTT-CCTGCAGACTCAGC--GGGT-CCAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268099 27 - 90373283 GCTT-CCTGCAGACCCAGC--GAGT-CCAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26180 27 - 179258 GCTT-CCTGCAGACTCAGC--GGGT-CCAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518489 27 - 5823884 GCTT-CCTGCAGACTCAGC--AGGT-CCAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172271 27 + 159171411 GCTT-TCTGTAGACTCAGA--GGGA-CCAAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238011 27 + 16356641 GCTT-CCTGTAGACTCAGA--GGGA-CCAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104902 27 + 1231380 GCTT-CCTGTAGACTCAGA--GGGA-CGAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634833 27 + 11732439 GCTT-CCTGTAGACTCAGA--GGGA-CCAAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22800690 29 + 22939663 GTTT-CATGTGAACCCAAAACGGGC-CCATT i otoGar3.GL873542 I 440 C 0 s mm10.chr2 181756306 24 + 182113224 ACTT-CCTGCAAAC-CAGC--AGGT---AAT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568294 110 + 47698779 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I a score=313891.000000 s hg38.chr20_KI270870v1_alt 61027 25 + 183433 GCAGGGTTTCCAAGCAGACTTTGCA s panTro5.chr20 66385848 25 + 66533130 GCAGGGTTTCCAAGCAGAGTTTGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066532 25 + 62195757 GCAGGGTTTCCAAGCAGAGTTAGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451579 25 - 578057 ACAGGGTTTCCAAGCAGACTTTGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979418 25 - 110113093 GCAAGGTTTCCAAGGAGACTTTGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706815 25 - 92844088 GCAGGGTTTCCAAGGAGACTTTGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374314 25 + 96509753 GCAGGGTTTCCAAGGAGACTTTGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844472 25 - 16982598 GCAGGGTTTCCAAGGAGACTTTGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646766 25 - 3785965 GCAGGGTTTCCAAGGAGACTTTGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268126 25 - 90373283 GCAGGGTTTCCAAGGAGACTTTGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26207 25 - 179258 GCAGGGTTTCCAAGGAGACTTTGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518516 25 - 5823884 GCAGGGTTTCCAAGGAGACTTTGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172298 25 + 159171411 GCATGGTTTCCAAGGAGGCTTTGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238038 25 + 16356641 GTAGGGTTTCCAAGGAGACTTTGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1104929 25 + 1231380 GTAGGGTTTCCAAGGAGACTTTGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634860 25 + 11732439 GCAGGGTTTCCAAGGGGACTTTGCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22800719 25 + 22939663 GTGGTGTGCCCAAGGAGGCTTTGCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181756330 25 + 182113224 GCCTTATTTCTAAACAGACATTGCA i mm10.chr2 C 0 I 230 s canFam3.chr24 47568404 25 + 47698779 GCAGTGTTTCCAGGGAGATCCCGCA i canFam3.chr24 I 110 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I a score=873995.000000 s hg38.chr20_KI270870v1_alt 61052 95 + 183433 GCTGGATGAGAGGAGGGGTCAGCG-CACCTGCTTCATACAGAGACTGATGTG-CCTGGGCCCAGGCAGGCCCGTGCTCCAAGCACCCTGTTCCTCAG s panTro5.chr20 66385873 95 + 66533130 GCTGGATGAGAGGAGGGGTCAGCG-CACCTGCTTCATACAGAGACTGATGTG-CCTGGGCCCAGGCAGGCCCGTGCTCCAAGCACCCTGTTCCTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066557 95 + 62195757 GCTGGATGAGAGGAGGGGTCAGCG-CACCTGCTTCATACAGAGACTGATGTG-CCTGGGCCCAGGCAGGCCCGTGCTCCAAGCACCCTGTTCCTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451604 95 - 578057 GCTGGATGAGAGGAGGGGTCAGCG-CACCTGCTTCACACAGAGACTGATGTG-CCTGGGCCCAGGCAGGCCCGTGCTCCAAGCACCCTGTTCCTCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979443 96 - 110113093 GCTGGATGAGAGGAGGGGTCAGCACCACCTGCTTCATACAGTGACTGATGTG-TCCATGCCCAGGCAGACCTGTGCTCCAAGCACCCTGTTCCTCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706840 95 - 92844088 GCTGGATGAGAGGAGGCGTCAGCG-CACCTGCTTCATATGGTGACTGATGTG-CCCGGGCCCAGGCAGGCCCATGCTCCAAGCACACTGTTCCTCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374339 95 + 96509753 GCTGGATGAGAGGAGGCGTCAGCG-CACCTGCTTCATATGGTGACTGATGTG-CCCGGGCCCAGGCAGGCCCATGCTCCAAGCACACTGTTCCTCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844497 95 - 16982598 GCTGGATGAGAGGAGGCATCAGCG-CACCTGCTTCATATGGTGACTGATGTG-CCCGGGCCCAGGCAGGCCCATGCTCCAAGCACACTGTTCCTCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646791 95 - 3785965 GCTGGATGAGAGGAGGCGTCAGCG-CACCTGCTTCATATGGTGACTGATGTG-CCCGGGCCCAGGCAGGCCCATGCTCCAAGCACCCTATTCCTCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268151 95 - 90373283 GCTGGATGAGAGGAGGCGTCAGCG-CACCTGCTTCATATGGTGACTGATGTg-cccaggcccaggcaggcccatgctccaagcACCCTATTCCTCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26232 95 - 179258 GCTGGATGAGAGGAGGCGTCAGCG-CACCTGCTTCATATGGTGACTGATGTG-CCTGGGCCCAGGCAGGCCCATGCTCCAAGCACCCTATTCCTCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518541 95 - 5823884 GCTGGATGAGAGGAGGCGTCAGCA-CACCTGCTTCATATGGTGACTGATGTG-CCTGGGCCCAGGCAGGTCCATGCTCTAAGCACCCTATTCCTCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172323 68 + 159171411 GCTGGATGGAAG--AGGGTCAGCA-CACCCGCTTCAC----------AGGTTCCCCGGGCCCAGGCACG----------------CCTATTCCTCAG i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16238063 84 + 16356641 GCTGGATGAGAGGCGGGGTCAGCA-CACCTGCTTCAT----------AGGTG-CCCGGGCCTAGGCAGG-CCGTGCTCCAAGCACCCTGTTCCTCAG i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1104954 84 + 1231380 GCTGGATGAGAGGAGGGGTCAGCA-CACCCGCTTCAT----------AGGTC-CCCGGGCCCAGGCAGG-CTGTGCTCCAAGCACCCTGTTCCTCAG i cebCap1.NW_016107870v1 C 0 I 4 s aotNan1.NW_018500483v1 2634885 84 + 11732439 GCTGGATGAGAGGAGGGGTCAGCA-CACCCGCTTCAT----------AGGTG-CCCAGGCCCAGGCAGG-CCGTGCTCCAAGCACCCTGTTCCTCAG i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22800744 86 + 22939663 GCTGCATGAGGGGACAGGTCAATT-C--------CACACTGTAGCTGGTGTG-CCAAGGCCATAGCAGA-CTATTCTCCAAGATTTGTGTTCCTCAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47568429 95 + 47698779 GCCGCCTGAAGGGACGGGCTGCAG-CTTCACGTTCACGCAGCGACCCGCGCG-CAGAGTCCACCGCGAGCCCACGCTCTGCGTGTCCTGTTCCTCAG i canFam3.chr24 C 0 I 5 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I a score=30477.000000 s hg38.chr20_KI270870v1_alt 61147 4 + 183433 GTGG s panTro5.chr20 66385968 4 + 66533130 GTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066652 4 + 62195757 GTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451699 4 - 578057 GTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979539 4 - 110113093 GTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706935 4 - 92844088 GTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374434 4 + 96509753 GTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844592 4 - 16982598 GTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646886 4 - 3785965 GTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268246 4 - 90373283 GTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26327 4 - 179258 GTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518636 4 - 5823884 GTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172392 3 + 159171411 -TTG i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16238148 3 + 16356641 -TTG i saiBol1.JH378156 I 1 C 0 s aotNan1.NW_018500483v1 2634970 3 + 11732439 -TTG i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22800830 4 + 22939663 CTGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568524 5 + 47698779 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105038 4 + 1231380 I a score=10500.000000 s hg38.chr20_KI270870v1_alt 61151 1 + 183433 G s panTro5.chr20 66385972 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066656 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451703 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979543 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92706939 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374438 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844596 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646890 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268250 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26331 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518640 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172395 1 + 159171411 G i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238151 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22800834 1 + 22939663 G i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568524 5 + 47698779 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105038 4 + 1231380 I e aotNan1.NW_018500483v1 2634973 0 + 11732439 C a score=617146.000000 s hg38.chr20_KI270870v1_alt 61152 129 + 183433 ACAGCCTCAtcttctttttcc--------------tttttttttttttgagatcgaatttcactctgttgcccaggcttgaatgcagtggtgtgatctcggctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg s panTro5.chr20 66385973 127 + 66533130 ACAGCCTCAtcttctttttcc----------------tttttttttttgagatcgagtttcactctgttgcccgggcttgagtgcagtggtgtgatctcggctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066657 126 + 62195757 ACAGCCTCAtcttctttttcc-----------------ttttttttttgagatcgagtttcactctgttgcccgggcttgagtgcagtggtgtgatctcggctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451704 131 - 578057 ACAGCCTCAtcttctttttcc------------tttttttttttttttgagattgagtttcactctgttgcccaggcttgagtgcagtggtgtgatctcggctcactgcagcctctgcct-cccag------gttcaagcaattctcctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109979544 122 - 110113093 ACAGCCCCAtctttttt---------------------tttttttttttagattgagtctcactctgttgcccaggctggagtgcagtggcgtgatctcagctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg i nomLeu3.chr13 C 0 I 837 s rheMac8.chr10 92706940 119 - 92844088 ACAGCTCCACCttc------------------------tttttttttcgagattgagtctcactctgtcgtccaggctgcagtgcagtggcgggatctcggctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374439 119 + 96509753 ACAGCTCCACCttc------------------------ttttttttttgagattgagtctcactctgtcgtccaggctgcagtgcagtggcgggatctcggctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844597 120 - 16982598 ACAGCTCCACCttc-----------------------tttttttttttgagattgagtctcactctgtcgtccaggctgcagtgcagtggcgggatctcggctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3646891 119 - 3785965 ACAGCTCCACCttc------------------------ttttttttttgagattgagtctcactctgtcgtccaggctgcagtgcagtggcgggatctcagctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268251 119 - 90373283 ACAGCTCCACCttc------------------------ttttttttttgagattgagtcttactctgtcatccaggctgcagtgcagtggtgggatctcggctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26332 119 - 179258 ACAGCTCCACCttc------------------------ttttttttttgagattgagtctcactctgtcgtccaggctggagtgcagtggcgggatctcggctcactgcagcctctgcct-cccgg------gttcaagcaattctcctg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518641 118 - 5823884 ACACTTCCACCttct----------------------tttttttttttgagattgagtctcactctgtcatccaggctgcagtgcagtggcgggatctcagctcactgcagcctctgcct-cccag------gttcaagcaatt---ctg i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22800835 136 + 22939663 -CAGCTCCTTTTCCAGACTCTGGGTGTGGGTCATGCCCCTTCCTCCTT---ACCGATCTTCACTCTGG-GTGGGGGCCAGCATGCAGC--TGTCCCCTAGGCT-------ACCTCTCCCTACCCAGCATCCTGTTGGGTCAGCTTCCCTC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568524 5 + 47698779 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e saiBol1.JH378156 16238152 0 + 16356641 C e cebCap1.NW_016107870v1 1105038 4 + 1231380 I e calJac3.chr5 58172396 0 + 159171411 C e aotNan1.NW_018500483v1 2634973 0 + 11732439 C a score=175155.000000 s hg38.chr20_KI270870v1_alt 61281 34 + 183433 cctcagcctcccgagtagctgggactacagatgc s panTro5.chr20 66386100 34 + 66533130 cctcagcctcccgagtagctgggactacagacgc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066783 34 + 62195757 cctcagcctcccgagtagctgggactacagacgc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451835 34 - 578057 cctcagcctcccgagtagctgggactatagacgc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707059 34 - 92844088 cctcagcctcctgagtagctgggactacaggcgt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374558 34 + 96509753 cctcagcctcctgagtagctggggctacaggcgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844717 34 - 16982598 cctcagcctcctgagtagctgggactacaggcgt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647010 34 - 3785965 cctcagcctcccgagtagctgggactacaggcat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268370 34 - 90373283 cctcagcctcccgagtagctaggactacaggcgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26451 34 - 179258 cctcagcctcccgagtagctgggactacagacgt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518759 34 - 5823884 cctcagcctcccgagtagctgggactacaggcgt i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22800971 34 + 22939663 CCTCTGCTTCCCCTGTGGATTTGCATACAGGTGC i otoGar3.GL873542 C 0 I 683 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568524 5 + 47698779 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e saiBol1.JH378156 16238152 0 + 16356641 C e cebCap1.NW_016107870v1 1105038 4 + 1231380 I e calJac3.chr5 58172396 0 + 159171411 C e aotNan1.NW_018500483v1 2634973 0 + 11732439 C e nomLeu3.chr13 109979666 837 - 110113093 I a score=666472.000000 s hg38.chr20_KI270870v1_alt 61315 149 + 183433 acaatgccatgtcctagtttttatattattcgtagatacagggtttcaccatgtttgccaggatggtcttgaactcctgaccttgtgatccgcccgccttggcctcccaaagtgctgcgattacaggcgtgagccaccatacccagccT s panTro5.chr20 66386134 149 + 66533130 acaatgccatgtcctagtttttatgttattagtagatacagggtttcaccatgtttgccaggatggtcttgaactcctgaccttgtgatccgcccgccttggcctcccaaagtgctgcgattacaggcgtgagccaccatacccagccC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066817 149 + 62195757 acaatgccatgtcctagtttttatgttattagtagatacagggtttcaccatgtttgccaggatggtcttgaactcctgaccttgtgatccgcccgccttggcctcccaaagtgctgcgattacaggcgtgagccaccatacccagccC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 451869 148 - 578057 acactgccgtgtcctagtttttatattattagtagatacagggtttcaccatgtctgccaggatggtcttgaactcctgacctcgtgatccacccgcctcggcct-ccaaagtgctgcgattacaggcgtgagccaccatacccagccT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707093 148 - 92844088 gcactgccacatcctaatttttatatcattagtagatacagggtttcaccacgtttgccaggatggtcttgaactcctgaccttgtgatccgcccacctcagcttcccaaagtgtgg-gattacaggcgtgagccactgcgcccggccT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374592 147 + 96509753 gcactgccacatcctaatttttatatcatt-gtagatacagggtttcaccacgtttgccaggatggtcttgaactcctgaccttgtgatccgcccacctcagcttcccaaagtgtgg-gattacaggcgtgagccactgcgcccggccT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844751 148 - 16982598 gcactgccacatcctaatttttatatcattagtagatacagggtttcaccacgtttgccaggatggtcttgaactcctgaccttgtgatccgcccacctcagcttcccaaagtgtgg-gattacaggcgtgagccactgcgcctggccT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647044 148 - 3785965 gcactgccatatcctaatttttatatcattagtagatacagggtttcaccacgtttgccaggatggtcttgaactcctgaccttgtgatccgcccacctcagctccccaaagtgcgg-gattacaggcgtgagccactgcgcccggccT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268404 148 - 90373283 gcactgccacatcctaatttttatattattagtagatacaggatttcaccacttttgccaggatggtcttgaactcctgaccttgtgatccgcccgcctcagcctcccaaagtgcgg-gattacaggtgtgagccactgcgcccggccT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26485 148 - 179258 gcactgccacatcctaatttttatatcattagtagatacagggtttcaccacgtttgccaggatggtcttgaactcctgaccttgtgatccgcccacctcagcttcccaaagtgcgg-gattacaggcgtgagccactgcgcccggccT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518793 148 - 5823884 gcactgccacttcctaatttttatattattagtagatacaggatttcaccacgtttgccaggatggtcttgaactcctgaccttgtgatccgcccgcctcagcctcccaaagtgcgg-gattacaggcatgagccactgcgcccggccT i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568524 5 + 47698779 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e saiBol1.JH378156 16238152 0 + 16356641 C e cebCap1.NW_016107870v1 1105038 4 + 1231380 I e calJac3.chr5 58172396 0 + 159171411 C e aotNan1.NW_018500483v1 2634973 0 + 11732439 C e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=4909.000000 s hg38.chr20_KI270870v1_alt 61464 1 + 183433 G s panTro5.chr20 66386283 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066966 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452017 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707241 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374739 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844899 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647192 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268552 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26633 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518941 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s cebCap1.NW_016107870v1 1105042 1 + 1231380 G i cebCap1.NW_016107870v1 I 4 C 0 s aotNan1.NW_018500483v1 2634973 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568524 5 + 47698779 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e saiBol1.JH378156 16238152 0 + 16356641 C e calJac3.chr5 58172396 0 + 159171411 C e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=216346.000000 s hg38.chr20_KI270870v1_alt 61465 28 + 183433 ACAGCCCCTTCTTTAGAGCCGGTGCCTC s panTro5.chr20 66386284 28 + 66533130 ACAGCCCCTTCTTTAGAGCCGGTGCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066967 28 + 62195757 ACAGCCCCTTCTTTAGAGCCGGTGCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452018 28 - 578057 ACAGCCCCTTCTTTAGAGCAGGTTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707242 27 - 92844088 ACAGCCCCTTCTTTAG-GCTGGTGCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374740 27 + 96509753 ACAGCCCCTTCTTTAG-GCTGGTGCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844900 27 - 16982598 ACAGCCCCTTCTTTAG-GCTGGTGCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647193 27 - 3785965 ACAGCCCCTTCTTTAG-GCTGGTGCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268553 27 - 90373283 ACAGCCCCTTCTTTAG-GCTGGTGCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26634 27 - 179258 ACAGCCCCTTCTTTAG-GCTGGTGCCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518942 27 - 5823884 ACAGCCCCTTCTTTAG-GCTGGTGCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172396 28 + 159171411 ACAGCCCCTTCTTTAGAGTGGACAACTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238152 28 + 16356641 ACAGCCCCTTCTTTAGAGCGGGCGCCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1105043 28 + 1231380 ACAGCTCCTTCTTTAGAGCGGGCGCCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2634974 28 + 11732439 ACAGCCCCTTCTTTAGAGCGGGCACCTT i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568524 5 + 47698779 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=641149.000000 s hg38.chr20_KI270870v1_alt 61493 70 + 183433 GGGCTCCCAGGCTCGGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGGGGTGGGGGG s panTro5.chr20 66386312 70 + 66533130 GGGCTCCCAGGCTCGGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGGGGTGGGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62066995 70 + 62195757 GGGCTCCCAGGCTCGGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGGGGTGGGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452046 68 - 578057 GGGCTCCCAGGCTCGGGGT-GGGGCTCACA--CCCTCCTCTCATGATCTTGCTTATCCCT--TGGGGT-GGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707269 66 - 92844088 GGGCTCCTAGGCTCAGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGG----GGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374767 66 + 96509753 GGGCTCCTAGGCTCAGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGG----GGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844927 66 - 16982598 GGGCTCCTAGGCTCAGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGG----GGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647220 66 - 3785965 GGGCTCCCAGGCTCAGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGG----GGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268580 66 - 90373283 GGGCTCCCAGGCTCAGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGG----GGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26661 66 - 179258 GGGCTCCCAGGCTCAGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGG----GGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5518969 66 - 5823884 GGGCTCCCAGGCTCGGGGT-GGGGCTCACA-CCCCTTCTCTCGTGATCTTGCTTATCCCT--TGG----GGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172424 70 + 159171411 AGGCTCCCAGGCTCGGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGGGGTGGGGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238180 70 + 16356641 GGGCTCCCAGGCTTGGGGT-GGGGCTCACA-CCCCTCCTCTCATGATCTTGCTTATCCCT--TGGGGTGGGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1105071 70 + 1231380 GGGCTCCCAGGCTTGGGGT-GGGGCTCACA-CCCCTCCTCTTATGATCTTGCTTATACCT--TGGGGTGGGAGG i cebCap1.NW_016107870v1 C 0 I 13 s aotNan1.NW_018500483v1 2635002 70 + 11732439 GGGCTCCCGGGCTTGGGGT-GGGGCTCGCA-CCCCTCCTCTCATACTCTTGCTTATCCCT--TGGGGTGGGGGG i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47568529 73 + 47698779 GGGCTCCGCGGCTCAGGGTGGGGGCTCGTGGTCCCTCCTCCCACGATCCTGCTTATCCCTCCTGGGGTGGGGG- i canFam3.chr24 I 5 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=7397.000000 s hg38.chr20_KI270870v1_alt 61563 1 + 183433 G s panTro5.chr20 66386382 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067065 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452114 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707335 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374833 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844993 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647286 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268646 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26727 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519035 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172494 1 + 159171411 G i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238250 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2635072 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 I 13 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568602 0 + 47698779 C e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105141 13 + 1231380 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=94182.000000 s hg38.chr20_KI270870v1_alt 61564 19 + 183433 GACCTGTGTCCTCCCAACC s panTro5.chr20 66386383 19 + 66533130 GACCTGTGTCCTCCCAACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067066 19 + 62195757 GACCTGTGTCCTCCCAACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452115 19 - 578057 GACCTGTGTCCTCCCAACC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707336 19 - 92844088 GGCCTGTGGCCCCCCAACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374834 19 + 96509753 AGCCTGTGGCCCCCCAACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16844994 19 - 16982598 GGCCTGTGGCCCCCCAACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647287 19 - 3785965 GGCCTGTGGCCCCCCAACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268647 19 - 90373283 GACCTGTGGCCCCCCAACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26728 19 - 179258 GGCCTGTGGCCCCCCAACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519036 19 - 5823884 GGCCTGTGGCCCCCCAACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172495 13 + 159171411 ---CTGTTGTCCCCCA--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238251 13 + 16356641 ---CTGTTGTCCCCCA--- i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47568602 12 + 47698779 --CCTATGGCCACC----- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105141 13 + 1231380 I e aotNan1.NW_018500483v1 2635073 13 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=70197.000000 s hg38.chr20_KI270870v1_alt 61583 7 + 183433 CCAAGCA s panTro5.chr20 66386402 7 + 66533130 CTAAGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067085 7 + 62195757 CTAAGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452134 7 - 578057 CCAAGCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707355 7 - 92844088 CCAAGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374853 7 + 96509753 CCAAGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845013 7 - 16982598 CCAAGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647306 7 - 3785965 CCAAGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268666 7 - 90373283 CCAAGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26747 7 - 179258 CCAAGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519055 7 - 5823884 CCAAGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172508 7 + 159171411 CCAAGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238264 7 + 16356641 CCAAGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1105154 7 + 1231380 CCAAGCA i cebCap1.NW_016107870v1 I 13 C 0 s aotNan1.NW_018500483v1 2635086 7 + 11732439 CCGAGCA i aotNan1.NW_018500483v1 I 13 C 0 s canFam3.chr24 47568614 7 + 47698779 CGAAGTA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756355 230 + 182113224 I e micMur3.chr18 56810215 7534 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=171557.000000 s hg38.chr20_KI270870v1_alt 61590 23 + 183433 CACAGCTGTCA-CCCCAGGTCACC s panTro5.chr20 66386409 23 + 66533130 CACAGCTGTCA-CCCCAGGTCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067092 23 + 62195757 CACAGCTGTCA-CCCCAGGTCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452141 23 - 578057 CACAGCTGTCA-CCCCAGGTCACC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707362 22 - 92844088 CACAGCTGTCA--CCCAGGTCACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374860 22 + 96509753 CACAGCTGTCA--CCCAGGTCACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845020 22 - 16982598 CACAGCTGTCA--CCCAGGTCACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647313 22 - 3785965 CACAGCTGTCA--CCCAGGTCACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268673 22 - 90373283 CACAGCTGTCA--CCCAGGTCACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26754 22 - 179258 CACAGCTGTCA--CCCAGGTCACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519062 22 - 5823884 CACAGCTGTCA--CCCAGGTCACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172515 21 + 159171411 CACAGCTGTCA-CCGCAGGCCA-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238271 8 + 16356641 CACAGCTG---------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1105161 23 + 1231380 CATAGCTGTCA-CCTCAGGTCACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2635093 23 + 11732439 CACGGCTGTCA-CTGCAGGTCACC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56817749 23 + 57149010 CACAGCTGTCT-CCCCAGGTCACC i micMur3.chr18 I 7534 C 0 s canFam3.chr24 47568621 24 + 47698779 CGTGGACTTCAGCGCAAGGTCACC i canFam3.chr24 C 0 I 4 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756355 230 + 182113224 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=35544.000000 s hg38.chr20_KI270870v1_alt 61613 3 + 183433 TCC s panTro5.chr20 66386432 3 + 66533130 TCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067115 3 + 62195757 TCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452164 3 - 578057 TCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707384 3 - 92844088 TCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374882 3 + 96509753 TCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845042 3 - 16982598 TCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647335 3 - 3785965 TCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268695 3 - 90373283 TCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26776 3 - 179258 TCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519084 3 - 5823884 TCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172536 2 + 159171411 -CC i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1105184 3 + 1231380 TCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2635116 3 + 11732439 TCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56817772 3 + 57149010 TCC i micMur3.chr18 C 0 I 5634 s mm10.chr2 181756585 3 + 182113224 TCT i mm10.chr2 I 230 C 0 s canFam3.chr24 47568649 3 + 47698779 TCC i canFam3.chr24 I 4 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e dasNov3.JH569290 204077 1851 - 397369 I e saiBol1.JH378156 16238279 0 + 16356641 C e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=1345945.000000 s hg38.chr20_KI270870v1_alt 61616 161 + 183433 -----TCTGCCTTTCTC-CCAGCACCCTGCATG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGTGCCCTTGGTGGCATTTGCATACAGGTGCCCT-------TGCAGCTGAAGTGTTGGGGCAGGGCCAGCAAACCCACGCCCGAGAGGGCCAGTGGCTCTT------GGCACAGGTGGTGG s panTro5.chr20 66386435 161 + 66533130 -----TCTGCCTTTCTC-CCAGCACCCTGCATG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGTGCCCTTGGTGGCATTTGCATACAGGTGCCCT-------TGCAGCTGAAGTGTTGGGGCAGGGCCAGCAAACCCACGCCCGAGAGGGCCAGTGGCTCTT------GGCACAGGTGGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067118 161 + 62195757 -----TCTGCCTTTCTC-CCAGCACCCTGCATG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGTGCCCTTGGTGGCATTTGCATACAGGTGCCCT-------TGCAGCTGAAGTGTTGGGGCAGGGCCAGCAAACCCACGCCCGAGAGGGCCAGTGGCTCTT------GGCACAGGTGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452167 158 - 578057 -----TCTGCCCTTCTC-CCAGCACCCTGCATG-CTCTGGCCTGGGCAGCC--CC--TC-----CCCTGTG-CCTTGGTGGCATTTGCATACAGGTGCCCT-------TGCAGCTGAAGTGTTGGGGCAGGGCCAGCAAACCCACGCCCAAGAGGGCCAGTGGCTCTC------GGCACAGGTGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707387 161 - 92844088 -----TCTGTCCTTCTC-CCAGTACCCTACATG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGTGCCCTTGGTGGCATTTGCATACAGGTGCCCT-------TACAGCTGAAGTGTTGGGGTGGGGCCGGCAAACCCACGCCCGGGAGGGCCAGCGGCTCTT------GGCACAGGTGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96374885 161 + 96509753 -----TCTGTCCTTCTC-CCAGTACCCTACGTG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGCGCCCTTGGTGGCATTTGCATACAGGTGCCCT-------TACAGCTGAAGTGTTGGGGTGGGGCCGGCAAACCCACGCCCGGGAGGGCCAGCGGCTCTT------GGCACAGGTGGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845045 161 - 16982598 -----TCTGTCCTTCTC-CCAGTACCCTACATG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGCGCCCTTGGTGGCATTTGCATACAGGTGCCCT-------TACAGCTGAAGTGTTGGGGTGGGGCCGGCAAACCCACGCCCGGGAGGGCCAGCGGCTCTT------GGCACAGGTGGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647338 161 - 3785965 -----TCTGTCCTTCTC-CCAGTACCCTACGTG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGCACCCTTGGTGGCATTTGCATACAGGTGCCCT-------TGCAGCTGAAGTGTTGGGGTGGGGCCGGCAAACCCACGCCCGGGAGGGCCAGCGGCTCTT------GGCACAGGTGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268698 161 - 90373283 -----TCTGTCCTTCTC-CCAGCACCCTACGTG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGCGCCCTTGGTGGCATTTGCATACAGGTGCCCT-------TGCAGCTGAAGTGTTGGGGTGGGGCCGGCAAACCCACGCCCGGGAGGGCCAGTGGCTCTT------GGCACAGGTGGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26779 161 - 179258 -----TCTGTCCTTCTC-CCAGTACCCTATGTG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGCGCCCTTGGTGGCATTTGCATACAGGTGCCCT-------TGCAGCTGAAGTGTTGGGGTGGGGCCGGCAAACCCATGCCCGGGAGGGCCAGCGGCTCTT------GGCACAGGTGGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519087 161 - 5823884 -----TCTGTCCTTCTC-CCGGCACCCTACATG-CTCTGGCCTGGGCAGCC--CCCTCC-----CCCTGTGCCCTTGGTGGCATTTGCATACAGGTGCCCT-------TGCAGCTGAAGTGTTGGGGTGGGGCCGGCAAACTCACGCCCGGGAGGGCCAGCAGCTCTT------GGCACAGGTGGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172538 164 + 159171411 -----TCTGCCCTTCT--CCAGCACCCTGTGTG-CTCTGGCCTGGCAGACG--CCCGCCCCCTCCCCTGCGCCCTTTGTGGGATTTGCATACAGGTGCCCA-------TCCAGCTGAAGTGTT-TGCCGGGGCTGGCAAGCCCACACCTGGGAGGGACAGTGGCTCCT------GGCACAGCTGGTGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238279 156 + 16356641 -------------TCT--CCAGCACCCTGCGTG-CTCTGGCCTGGCAGACC--CTCGCCCCCTCCCCCGCGCCCTTGGTGGGATTTGCATACAGGTGCCCA-------TCCAGCTGAAGTGTT-TGCCGGGGCTGGCAAGCCCATACCTCGGGGCGCCAGTGGCTCCT------GGCACAGGTGGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1105187 164 + 1231380 -----TCTGCCCTTCT--CCAGCACCCTGTGTG-CTCTGGCCTGGCAGACC--CCCGCCCCCTCCCCCGTGCCCTTGGTGGGATTTGCATACAGGTGCCCA-------TCCAGCTGAAGTGTT-TGCTGGGGCCGGCAAGCCCACACCTGGGGGGGCCAGTGGCTCCT------GGCACAGGTGGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2635119 152 + 11732439 -----TCTGCCCTTCT--CCAGCACCCTGCGTG-CTCTGGCCTGGCAGACC--CCCGCC------------CCCTTGGTGGGATTTGCATACAGGTGACCA-------TCCAGCTGAAGTGTT-TGCCGGGGCCGGCAAGCCCACACCTGGGAGGGTCAGTGGCTCCT------GGCACAGGTGGTGG i aotNan1.NW_018500483v1 C 0 I 15 s mm10.chr2 181756588 136 + 182113224 -----TGTACCTTTTCT-CTAGCAACC----TG-CTCTGCTCTGTTTAG---------------CTCTGCA---TTAGTGGGGTTTGCATATGGGCGCTGA-------TGGAACC----TGCT------------GCCAATTCATTCCTGTGATGACCAGCAGTTAGTCCAGGAGTCACTGGTGGTAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47568652 150 + 47698779 CCAGGGCTGCCTTCCTCTCCAGCACCCTGCTCGACTCCG--CTGCTCAACCCTCCCTCC-----CCCTGTGCCCCC-GCGGGATTTGCATACAGGTGCCCCTGTCTGGTGCAGCTGAAGGGCT-GGGGGGGCTCAGCA-----------GCAAGGG------------------AGCACAGGTGGTGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=209072.000000 s hg38.chr20_KI270870v1_alt 61777 27 + 183433 GA-CAATGGCCACTCAGAACACGGCTGC- s panTro5.chr20 66386596 27 + 66533130 GA-CAATAGCCACTCAGAACACGGCTGC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067279 27 + 62195757 GA-CAATGGCCACTCAGAACACGGCTGC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452325 27 - 578057 GA-CAATGGCCGCTCAGAACACGGCTGC- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707548 27 - 92844088 GA-CAATGGCCACTCAGAACATGGCTTT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375046 27 + 96509753 GA-CAATGACCACTCAGAACATGGCTTC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845206 27 - 16982598 GA-CAATGGCCACTCAGAACATGGCTTC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647499 27 - 3785965 GA-CAATGGCCACTCAGAACATGGCTTT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90268859 27 - 90373283 GA-CAATGGCCACTCAGAACATGGCTTC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 26940 27 - 179258 GA-CAGTGGCCACTCAGAACATGGCTTT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519248 27 - 5823884 GA-CAATGGCCACTCAGAACATGGCTTC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172702 27 + 159171411 -ACCAATGGCCACTCAGAACGTGGCTTC- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238435 26 + 16356641 -A-CAGTGGCCACTCAGAACGTGGCTTC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1105351 26 + 1231380 -A-CGATGGCCCCTCAGAATGTGGCTTC- i cebCap1.NW_016107870v1 C 0 C 0 s mm10.chr2 181756724 27 + 182113224 AA-CAATGGAAACTCCAAATGTGGACTT- i mm10.chr2 C 0 I 11 s canFam3.chr24 47568802 28 + 47698779 GA-CAAAGGCCACTAGCAAAGTGGGTTTT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e aotNan1.NW_018500483v1 2635271 15 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=338231.000000 s hg38.chr20_KI270870v1_alt 61804 37 + 183433 GCTCCCCTG--------------------------------------------------------CCGCCTCCTTGGGGCTCACACCTTGCTC s panTro5.chr20 66386623 37 + 66533130 GCTCCCCTG--------------------------------------------------------CCGCCTCCTTGGGGCTCACACCTTGCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067306 37 + 62195757 GTTCCCCTG--------------------------------------------------------CCGCCTCCTTGGGGCTCACACCTTGCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452352 37 - 578057 GCTCCCCTG--------------------------------------------------------CCGCCTCCTTGGGGCTCACACCTTGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707575 37 - 92844088 GCTCCCTTG--------------------------------------------------------CCACCTCCTCGGGGCTCACACCTTGCTC i rheMac8.chr10 C 0 I 87 s macFas5.chr10 96375073 37 + 96509753 GCTCCCTTG--------------------------------------------------------CCACCTCCTCGGGGCTCACACCTTGCTC i macFas5.chr10 C 0 I 87 s macNem1.NW_012014244v1 16845233 37 - 16982598 GCTCCCTTG--------------------------------------------------------CCACCTCCTCGGGGCTCACACCTTGCTC i macNem1.NW_012014244v1 C 0 I 87 s cerAty1.NW_012001373v1 3647526 37 - 3785965 GCTCCCTTG--------------------------------------------------------CCACCTCCTCGGGGCTCACACCTTGCTC i cerAty1.NW_012001373v1 C 0 I 87 s chlSab2.chr2 90268886 37 - 90373283 GCTCCCCTG--------------------------------------------------------CCACCTCCTCGGGGCTCACACCTTGCTC i chlSab2.chr2 C 0 I 87 s manLeu1.NW_012101652v1 26967 37 - 179258 GCTCCCTTG--------------------------------------------------------CCACCTCCTCGGGGCTCACACCTTGCTC i manLeu1.NW_012101652v1 C 0 I 87 s colAng1.NW_012114444v1 5519275 37 - 5823884 GCTCCCCTG--------------------------------------------------------CCACCTCCTCGGGGCTCACACCTCGCTC i colAng1.NW_012114444v1 C 0 I 87 s calJac3.chr5 58172729 37 + 159171411 GCTCCCTGT--------------------------------------------------------CTGCCTTCTCGGGGCTAACACCTTGCTC i calJac3.chr5 C 0 I 21 s saiBol1.JH378156 16238461 37 + 16356641 GCTCCCCGT--------------------------------------------------------CCACCTCCTCGGGGCTCACACCTTGCTC i saiBol1.JH378156 C 0 I 53 s cebCap1.NW_016107870v1 1105377 37 + 1231380 GCTCCCCGT--------------------------------------------------------CCGCCTCCTCGGGGCTCACACCTTGCTC i cebCap1.NW_016107870v1 C 0 I 89 s aotNan1.NW_018500483v1 2635286 37 + 11732439 GCTCCCCGT--------------------------------------------------------CCGCCTCCTCGGGGCTCACACCTTGCTC i aotNan1.NW_018500483v1 I 15 I 87 s mm10.chr2 181756762 93 + 182113224 GCTTCCCTGAGGCTTTTGTTTTACTTCTGTACCAATGACAAAAGGTCGGTGGTAATGTTGGAGTCTCTCTTTTGCTGTGCTATTACCTTGATC i mm10.chr2 I 11 I 3 s canFam3.chr24 47568830 37 + 47698779 ATTTCCCTG--------------------------------------------------------CCTCCTTCTCGTGGCTGTGGCCTCGCTC i canFam3.chr24 C 0 I 1270 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=13602.000000 s hg38.chr20_KI270870v1_alt 61841 2 + 183433 GG s panTro5.chr20 66386660 2 + 66533130 GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067343 2 + 62195757 GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452389 2 - 578057 GG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707699 2 - 92844088 AG i rheMac8.chr10 I 87 C 0 s macFas5.chr10 96375197 2 + 96509753 AG i macFas5.chr10 I 87 C 0 s macNem1.NW_012014244v1 16845357 2 - 16982598 AG i macNem1.NW_012014244v1 I 87 C 0 s cerAty1.NW_012001373v1 3647650 2 - 3785965 AG i cerAty1.NW_012001373v1 I 87 C 0 s chlSab2.chr2 90269010 2 - 90373283 AG i chlSab2.chr2 I 87 C 0 s manLeu1.NW_012101652v1 27091 2 - 179258 AG i manLeu1.NW_012101652v1 I 87 C 0 s colAng1.NW_012114444v1 5519399 2 - 5823884 AG i colAng1.NW_012114444v1 I 87 C 0 s calJac3.chr5 58172787 2 + 159171411 GG i calJac3.chr5 I 21 I 66 s saiBol1.JH378156 16238551 2 + 16356641 GG i saiBol1.JH378156 I 53 I 34 s aotNan1.NW_018500483v1 2635410 2 + 11732439 AG i aotNan1.NW_018500483v1 I 87 C 0 s mm10.chr2 181756858 2 + 182113224 AG i mm10.chr2 I 3 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105414 89 + 1231380 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=340875.000000 s hg38.chr20_KI270870v1_alt 61843 35 + 183433 TTTAGTCGCTGTCTGAGCCTT-AGTTCCTGGTCATA s panTro5.chr20 66386662 35 + 66533130 TTTAGTCGCTGTCTGAGCCTT-AGTTCCTGGTCATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067345 35 + 62195757 TTTAGTCGCTGTCTGAGCCTT-AGTTCCTGGTCATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452391 35 - 578057 TTTAGTCGCTGTCTGAGCCTT-AGTTCCTGGTCATA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707701 35 - 92844088 TTTAGTCACTGTCTGAGCCTT-AGTTCCTGGTCATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375199 35 + 96509753 TTTAGTCACTGTCTGAGCCTT-AGTTCCTGGTCATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845359 35 - 16982598 TTTAGTCACTGTCTGAGCCTT-AGTTCCTGGTCATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647652 35 - 3785965 TTTAGTCACTGTCTGAGCCTT-AGTTCCTGGTCATA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269012 35 - 90373283 TTTAGTCACTGTCTGAGCCTT-AGTTCCTGGTCATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27093 35 - 179258 TTTAGTCACTGTCTGAGCCTT-AGTTCCTGGTCATA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519401 35 - 5823884 TTTAGTCACTGTCTGAGCCTT-AGTTCCTGGTCATA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172855 31 + 159171411 tttagtca----ctgagcctt-agtttctggtcata i calJac3.chr5 I 66 C 0 s saiBol1.JH378156 16238587 35 + 16356641 TTTAGTGACCGTCTGAGCCTT-AGTTTCTGGTCCTA i saiBol1.JH378156 I 34 C 0 s cebCap1.NW_016107870v1 1105503 35 + 1231380 TTTAGTCACTGTCTGAGCCTC-AGTTTCTGGTGATA i cebCap1.NW_016107870v1 I 89 C 0 s aotNan1.NW_018500483v1 2635412 35 + 11732439 TTTAGTCACTGTCTGAGCCTT-AGTTTCTGGTCATA i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181756860 36 + 182113224 TTTAGTCACTGTCTGAGCCTTCAGACCCTGAATATA i mm10.chr2 C 0 I 2195 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=1530888.000000 s hg38.chr20_KI270870v1_alt 61878 218 + 183433 ACTG-GGCTGTGCGGGGCTTGGGGCCTCATATGAGGAGGAACTGATGGCCTGTGTGTGCTGGCAGAGGAGGCGGTGTCATCCCGGCGGGTCTCTGCAGATCCACTGCACAAACACTGCAtgtgtgtatgtgcagtgtgtgtgtttatgta----gtgtgtttgtgtgtctgtatatatgcgtgtgatgtgtatatg--gtgtgtatgtgtgtttgtgttgtgtgt s panTro5.chr20 66386697 214 + 66533130 ACTG-GGCTGTGCGGGGCTTGGGGCCTCATATGAGGAGGAACTGATGGCCTGTGTGTGCTGGCAGAGGAGGCGGTGTCATCCCGGCGGGTCTCTGCAGATCCACTGCACAAACACTGCAtgcgtgtatgtgcagtgtgtgtgtttatgta----gtg----tgtgtgtctgtatatatgtgtgtgatgtgtatatg--gtgtgtatgtgtgtttgtgttgtgtgt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067380 214 + 62195757 ACTG-GGCTGTGAGGGGCTTGGGGCCTCATATGAGGAGGAACTGATGGCCTGTGTGTGCTGGCAGAGGAGGCGGTGTCATCCCGGCGGGTCTCTGCAGATCCACTGCACAAACACTGCAtgcgtgtatgtgtagtgtgtgtgtttatgta----gtg----tgtgtgtctgtatatatgtgtgtgatgtgtatatg--gtgtgtatgtgtgtttgtgttgtgtgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452426 218 - 578057 ACTG-GGCTGTGCGGGGTGTGGGGCCTCGCATAAGGAGGAACTGATGGCCTGTGTGTGCTGGCAGAGGAGGCGGTGTCATCCCGGTGGGTCTCTGCACATCCACTGCACAAACACTGCAtgcgtgtaggtgcagtgtgtgtgtttatgta----gtgtgtttgtgtgtctgtgtatatgtgtgtgatgtgtatatg--gtgtgtatgtgtgtttgtgttgtgtgt i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707736 217 - 92844088 ACTGGGGCTCTACAGGGCTTGGGGCCTCGTGTAAGGAGGAACTGGTGGCC--TGTGTGCTGGCAGAGGAGGTGGTGTCATCCTGGTGGGTCTCTGCACATCCACTGCACACACACTGCAtgtgtgtatgtgtggtgtgtgtgtttatgta----gtgtg--tttgtgtctgtgtatatgtgtgtgatgtgtatatggtgtgtgtgtgtgtgtttgtgttgtgtgt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375234 217 + 96509753 ACTGGGGCTCTACAGGGCTTGGGGCCTCGTGTAAGGAGGAACTGATGGCC--TGTGTGCTGGCAGAGGAGGTGGTGTCATCCTGGTGGGTCTCTGCACATCCACTGCACACACACTGCAtgtgtgtatgtgtggtgtgtgtgtttatgta----gtgtg--tttgtgtctgtgtatatgtgtgtgatgtgtatatggtgtgtgtgtgtgtgtttgtgttgtgtgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845394 217 - 16982598 ACTGGGGCTCTACAGGGCTTGGGGCCTCGTGTAAGGAGGAACTGATGGCC--TGTGTGCTGGCAGAGGAGGTGGTGTCATCCTGGTGGGTCTCTGCACATCCACTGCACACACACTGCAtgtgtgtatgtgtggtgtgtgtgtttatgta----gtgtg--tttgtgtctgtgtatatgtgtgtgatgtgtatatggtgtgtgtgtgtgtgtttgtgttgtgtgt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647687 211 - 3785965 ACTGGGGCTCTGCAGGGCTTGGGCCCTCGTGTAAGGGGGAACTGATGGCC--TGTGTGCTGGCAGAGGAGGTGGTGTCATCCCGGTGGGTCTATGCACATCCACTGCACACACACTGCAtgtgtgtatgtgtggtgtgtgtgtttatgta----gtgtg--tttgtgtctgtgtatatgtgtgtgatgtgtatatg------gtgtgtgtgtttgtgttgtgtgt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269047 215 - 90373283 ACTGCGGCTCTGCAGGGCTTGGGGCCTCGTGTAAGGAGGAACTGATGGCC--TGTGTGCTGGCAGAGGAGGTGGTGTCATCCCGGTGGGTCTCTGCACATCCACTGCACACACACTGCAtgtgtgtatgtgtggtgtgtgtgtttatgta----gtgtg--tttgtgtctgtgtatatgtgtgtgatgtgtatat--ggtgtgtgtgtgtgtttgtgttgtgtgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27128 217 - 179258 ACTGGGGCTCTGCAGGGCTTGGGGCCTCGTGTAAGGGGGAACTGATGGCC--TGTGTGCCGGCAGAGGAGGTGGTGTCATCCCGGTGGGTCTCTGCACATCCACTGCACACACACTGCAtgtgtgtatgtgtggtgtgtgtgtttatgta----gtgtg--tgtgtgtctgtgtatatgtgtgtgatgtgtatatggggggtgtgtgtgtgtttgtgttgtgtgt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519436 194 - 5823884 ACTGGGGCTCTGCAGGGCTTGGGGACTCATGTAAGGAGGAACTGATGGCC--TGTGTGCTGGCAGAGGAGGTGGTGTCATCCCGGCGGGTCTCTGCACATCCACTGCACACACACTGCAtgtgtgtatgtgtggtgtgtgtgtttatgta----gtgtg--tttgtgtctgtgtatatgtgtgtgatgtgtatatg-----------------------gtgtgt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58172886 180 + 159171411 atggggGCTCTTCGGGGCTTGGGACCTCGTCTAAGAAGGAACTGATGGCCTGTGTGGGCTGGCAGAGGA---GGTGTCATCCCGGCAGGTCTCTGTACATCCACTGCATACACTCTGCAtgtgcgtatgtgcg--gtgtgtgtttatgta----gtgtgtatgtgtgtc-----------------tatgtatatg--gtgagtatgt----------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238622 197 + 16356641 ACAGGGGCTCTTCGGGGCTTGGGACCTTGTGTAAGAAGGAACTGATGGCCTGTGGGGGCTGGCAGAGGA---GGGGTCATCCTGGCAGGTCTCTGCACATCCACTGCACACATTCTGCAtgtgtgtatgtgca--gtgtgtgtttatgta----gtatgtatgtgtgtctgtgtttatgtgtgtgatgtgtatatg--gtgtgtatgt----------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1105538 216 + 1231380 ACGGGGGCTCTTTGGGGCTTGGGACCTCGTGTAAGAAGGAACGGATGGCCTGTGTGGGCTGGCAGAGGA---GGGGTCATCCCAGCAGGTCTCTGCACATCCACTGCACACACTCTGCAtgtgcgtatgtgtg--gtgtgtgtatatgtatgtgatgtgtatatg-gtgtgtatgtatgtgtgtggtgtgtttatg--aggtgtgtgtgtatttgt-gtgtctgt i cebCap1.NW_016107870v1 C 0 I 33 s aotNan1.NW_018500483v1 2635447 212 + 11732439 ACGGGGGCTCTTCGGGGCTTGGGACCTCGTGTAAGAAGGAACTGATGGCCTGTGTGGGCTGGCAGAGGA---GGTGTCATCCCGGCAGGTCTCTGCACATCCACTGCACACA--CTGCAtgtgtgtatgtgca--gtgtgtgtttatgta----gtgtgtctgtgtgtctgcgtatatgtgtgtaatgtgtatatg--atgtgtatgtatgtgtgtggtgtgttt i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=25662.000000 s hg38.chr20_KI270870v1_alt 62096 3 + 183433 atg s panTro5.chr20 66386911 3 + 66533130 atg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067594 3 + 62195757 atg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452644 3 - 578057 atg i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707953 3 - 92844088 atg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375451 3 + 96509753 atg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845611 3 - 16982598 atg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647898 3 - 3785965 atg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269262 3 - 90373283 atg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27345 3 - 179258 atg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519630 3 - 5823884 atg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58173066 3 + 159171411 atg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238819 3 + 16356641 atg i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2635659 3 + 11732439 atg i aotNan1.NW_018500483v1 C 0 I 1806 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105754 33 + 1231380 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=141515.000000 s hg38.chr20_KI270870v1_alt 62099 21 + 183433 tgtgtggtgtgtt--tgaggtgt s panTro5.chr20 66386914 21 + 66533130 tgtgtggtgtgtt--tgaggtgt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067597 21 + 62195757 tgtgtggtgtgtt--tgaggtgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452647 21 - 578057 tgtgtggtgtgtt--tgaggtgt i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707956 23 - 92844088 tgtgtggtgtgtttgtgaggtgt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375454 23 + 96509753 tgtgtggtgtgtttgtgaggtgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845614 23 - 16982598 tgtgtggtgtgtttgtgaggtgt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647901 23 - 3785965 tgtgtggtgtgtttgtgaggtgt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269265 23 - 90373283 tgtgtggtgtgtttgtgaggtgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27348 23 - 179258 tgtgtggtgtgtttgtgaggtgt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519633 23 - 5823884 tgtgtggtgtgtttgtgaggtgt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58173069 23 + 159171411 tgtatggtgtgtttatgaggcgt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238822 23 + 16356641 tgtgtggtgtgtttatgaggtgt i saiBol1.JH378156 C 0 I 28 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105754 33 + 1231380 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=224083.000000 s hg38.chr20_KI270870v1_alt 62120 40 + 183433 gcgtgtatttgt-gtgtctgtgtgtgtgtggtatgtatatg-- s panTro5.chr20 66386935 40 + 66533130 gtgtgtatttgt-gtgtctgtgtgtgtgtggtatgtatatg-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067618 40 + 62195757 gtgtgtatttgt-gtgtctgtgtgtgtgtggtgtgtatatg-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452668 39 - 578057 gcatgtatttgt-gtgtctgtatgt-tgtggtgtgtatatg-- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92707979 40 - 92844088 gcgtgtatttgt-atgtctgtgtgtgtgtggtgtgtatatg-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375477 40 + 96509753 gcgtgtatttgt-atgtctgtgtgtgtgtggtgtgtatatg-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845637 40 - 16982598 gcgtgtatttgt-atgtctgtgtgtgtgtggtgtctatatg-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647924 40 - 3785965 gcgtgtatttgt-atgtctgtgtgtgtgtggtgtgtatatg-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269288 40 - 90373283 gcgtgtatttgt-atgtctgtgtgtgtgtggtgtgtatata-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27371 40 - 179258 gcgtgtatttgt-atgtctgtgtgtgtgtggtgtgtatatg-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519656 40 - 5823884 gcatgtatttgt-gtgtctgtgtgtgtgtggtgtgtatatg-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58173092 37 + 159171411 gtgtgtatttgt-gtgtgtgta-----atggagtgtatatatg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16238873 43 + 16356641 gtgtgtatgtgtggtgtgtatatgcatgtggtgtgtgtgtctg i saiBol1.JH378156 I 28 C 0 s cebCap1.NW_016107870v1 1105787 30 + 1231380 gtgtgtatatgt-gt------------gtggtgtgtgtgtctg i cebCap1.NW_016107870v1 I 33 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=103575.000000 s hg38.chr20_KI270870v1_alt 62160 29 + 183433 gtgtgtatgt-ctgtgtgtggtgtgtgtgt---- s panTro5.chr20 66386975 29 + 66533130 gtgtgtatgt-ctgtgtgtggtgtgtgtgt---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067658 25 + 62195757 gtgtgtatgt-ctgtgtgtg----gtgtgt---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452707 25 - 578057 gtgtgtatgt-ctgtgtgtg----gtgtgt---- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708019 25 - 92844088 gtgtgtatgt-ctgtgtgtg----gtgtgt---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375517 25 + 96509753 gtgtgtattt-ctgtgtgtg----gtgtgt---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845677 25 - 16982598 gtgtgtatgt-ctgtgtgtg----gtgtgt---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647964 25 - 3785965 gtgtgtatgt-ctgtgtgtg----gtgtgt---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269328 22 - 90373283 gtgtgtatgt-ctgtgtgtg----gtg------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27411 22 - 179258 gtgtgtatgt-ctgtgtgtg----gtg------- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58173129 25 + 159171411 gtgtgt-----gtctatgtg----gtgtgtATAT i calJac3.chr5 C 0 N 0 s saiBol1.JH378156 16238916 30 + 16356641 gtgtgtatatagtgtatatg----gtgtgtatgt i saiBol1.JH378156 C 0 I 19 s cebCap1.NW_016107870v1 1105817 30 + 1231380 gtgtgtatatagtgtatatg----gtgtatatgt i cebCap1.NW_016107870v1 C 0 I 19 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e colAng1.NW_012114444v1 5519696 0 - 5823884 C e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=153956.000000 s hg38.chr20_KI270870v1_alt 62189 30 + 183433 gtgtctgtgggtctgtggggtctgtttgat s panTro5.chr20 66387004 30 + 66533130 gtgtctgtgggtctgtggggtctgtttgat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067683 26 + 62195757 gtgtctgtgggtctgtggggtc----tgag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452732 30 - 578057 gtgtctgtgggtctgtggggtctgtttgat i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708044 30 - 92844088 gtgtctgtgggtctgtggggtctgtttgat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375542 30 + 96509753 gtgtctgtgggtctgtggggtctgtttgat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845702 30 - 16982598 gtgtctgtgggtctgtggggtctgtttgat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3647989 30 - 3785965 gtgtctgtgggtctgtggggtctgtttgat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269350 25 - 90373283 -----tgtgtgtctgtggggtctgtttgat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27433 29 - 179258 -tgtctgtgggtctgtggggtctgtttgat i manLeu1.NW_012101652v1 C 0 C 0 s saiBol1.JH378156 16238965 26 + 16356641 ----gtgtgggtctgtgGGAGCTGTTTGAT i saiBol1.JH378156 I 19 C 0 s cebCap1.NW_016107870v1 1105866 30 + 1231380 gtgtctgtgggtctgtgggatctgtttgat i cebCap1.NW_016107870v1 I 19 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e colAng1.NW_012114444v1 5519696 0 - 5823884 C e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=62462.000000 s hg38.chr20_KI270870v1_alt 62219 17 + 183433 gtatgtggtgtgtgtat s panTro5.chr20 66387034 17 + 66533130 gtatgtggtgtgtgtat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067709 17 + 62195757 gtatgtggtgtgtgtgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452762 17 - 578057 gtatgtggtgtgtgtat i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708074 17 - 92844088 gtatgtggtgtgtgtgt i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96375572 17 + 96509753 gtatgtggtgtgtgtgt i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16845732 17 - 16982598 gtatgtggtgtgtgtgt i macNem1.NW_012014244v1 C 0 I 2 s chlSab2.chr2 90269375 17 - 90373283 gtatgtggtgtgtgtgt i chlSab2.chr2 C 0 I 2 s manLeu1.NW_012101652v1 27462 7 - 179258 gtatgtg---------- i manLeu1.NW_012101652v1 C 0 C 0 s saiBol1.JH378156 16238991 17 + 16356641 GTACATGGTGTGTGTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1105896 17 + 1231380 gtacatggtgtgtgttt i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e cerAty1.NW_012001373v1 3648019 0 - 3785965 C e colAng1.NW_012114444v1 5519696 0 - 5823884 C e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=15184.000000 s hg38.chr20_KI270870v1_alt 62236 7 + 183433 gtgtgtg-- s panTro5.chr20 66387051 7 + 66533130 gtgtgtg-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067726 7 + 62195757 ttgtgtg-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452779 7 - 578057 gtgtgtg-- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708093 7 - 92844088 gtgtgtg-- i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96375591 7 + 96509753 gtgtgtg-- i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16845751 7 - 16982598 gtgtgtg-- i macNem1.NW_012014244v1 I 2 C 0 s manLeu1.NW_012101652v1 27469 7 - 179258 gtgtgtg-- i manLeu1.NW_012101652v1 C 0 C 0 s saiBol1.JH378156 16239008 7 + 16356641 --ATGTGGC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1105913 7 + 1231380 --atgtgac i cebCap1.NW_016107870v1 C 0 I 1 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e cerAty1.NW_012001373v1 3648019 0 - 3785965 C e colAng1.NW_012114444v1 5519696 0 - 5823884 C e chlSab2.chr2 90269392 2 - 90373283 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=93114.000000 s hg38.chr20_KI270870v1_alt 62243 26 + 183433 tctgtgtgtgtgtgtggtgtgtatat s panTro5.chr20 66387058 26 + 66533130 tctgtgtgtgtgtgtggtgtgtatat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067733 26 + 62195757 tgtctgtgtgtgtgtggtgtctatat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452786 24 - 578057 tc--tgtgtgtgtgtggtgtgtatat i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708100 26 - 92844088 tctatgtgtgtgtgtggtgtctatat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375598 26 + 96509753 tctatgtgtgtgtgtggtgtctatat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845758 26 - 16982598 tctatgtgtgtgtgtggtgtctatat i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101652v1 27476 26 - 179258 tctatgtgtgtgtgtggtgtctatat i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 0 16 + 372756 TCtgtgtttgtatgtg---------- i calJac3.chrUn_GL286459 N 0 C 0 s saiBol1.JH378156 16239016 26 + 16356641 TCTAtgtgtgtatgtggtgtgtgtat i saiBol1.JH378156 I 1 I 14 s cebCap1.NW_016107870v1 1105921 26 + 1231380 tctatgtgtgtatgtggtgtgtgtat i cebCap1.NW_016107870v1 I 1 I 1403 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e cerAty1.NW_012001373v1 3648019 0 - 3785965 C e colAng1.NW_012114444v1 5519696 0 - 5823884 C e chlSab2.chr2 90269392 2 - 90373283 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=-6089.000000 s hg38.chr20_KI270870v1_alt 62269 1 + 183433 -t s panTro5.chr20 66387084 1 + 66533130 -g i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067759 1 + 62195757 -g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452810 1 - 578057 -g i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708126 1 - 92844088 -g i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375624 1 + 96509753 -g i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845784 1 - 16982598 -g i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101652v1 27502 1 - 179258 -g i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 16 1 + 372756 c- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16239056 1 + 16356641 t- i saiBol1.JH378156 I 14 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e cerAty1.NW_012001373v1 3648019 0 - 3785965 C e colAng1.NW_012114444v1 5519696 0 - 5823884 C e chlSab2.chr2 90269392 2 - 90373283 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105947 1403 + 1231380 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=50311.000000 s hg38.chr20_KI270870v1_alt 62270 51 + 183433 gtgtg--------------------------------------tatgtc-------tgtgtgtggtgtgt----gtgtc---tgtggg-tctgtg---------------------------------------gggtc----tgag s panTro5.chr20 66387085 51 + 66533130 gtgtg--------------------------------------tatgtc-------tgtgtgtggtgtgt----gtgtc---tgtggg-tctgtg---------------------------------------gggtc----tgag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067760 25 + 62195757 gtgtg--------------------------------------tatgtc-------tgtgtgtgttgtgt----------------------------------------------------------------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452811 59 - 578057 gtgtg--------------------------------------tatgtc-------tgtgtgtggtgtgtgtgtgtgtc---tgtggg-tctgtg---------------------------------------gggtctgtttgag i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708127 53 - 92844088 gtgtg--------------------------------------tatgtc-------tgtgtgtgttgtgtgtgtgtgtc---tatgtg---tgtg---------------------------------------gggtctgtt---- i rheMac8.chr10 C 0 I 4 s macFas5.chr10 96375625 49 + 96509753 gtgtg--------------------------------------tatg-----------tgtgtgttgtgtgtgtgtgtc---tatgtg---tgtg---------------------------------------gggtctgtt---- i macFas5.chr10 C 0 I 4 s macNem1.NW_012014244v1 16845785 51 - 16982598 gtgtg--------------------------------------tatgtc---------tgtgtgtgttgtgtgtgtgtc---tatgtg---tgtg---------------------------------------gggtctgtt---- i macNem1.NW_012014244v1 C 0 I 4 s manLeu1.NW_012101652v1 27503 49 - 179258 gtgtg--------------------------------------tatgtc-------tgtgtgcgttgtgtgtgtgtgtc---tacgtg---tgtg---------------------------------------gggtc-------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519696 44 - 5823884 gtgtg--------------------------------------tatgtc------------------tgtgtgtgtgtc---tgtggg-tctgtg---------------------------------------gggtctgat---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 17 60 + 372756 gtgtgtt------------------------------------tgtgtc-----tacgtgtgtgttgcgtgtttgcgtg---tgtgtggtgtgtc---------------------------------------gggtctgtt---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16239057 143 + 16356641 gtgtgttatgtgtgtgtggggtgtgtatgtgtaggatctgttgtgtgtctgtggtacgtgtgtgatgtgtatgtgtgtggtatgtgtcgtgtgtatatggtatgtatgtctgtgcgtgtgtgtgtgtttctgtggggtctgat---- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e cerAty1.NW_012001373v1 3648019 0 - 3785965 C e chlSab2.chr2 90269392 2 - 90373283 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105947 1403 + 1231380 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=48251.000000 s hg38.chr20_KI270870v1_alt 62321 17 + 183433 gtatgtggtgtgtgtgt-- s panTro5.chr20 66387136 15 + 66533130 gtatgtg--gtgtgtgt-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067785 8 + 62195757 ---------gtgtgcct-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452870 15 - 578057 gtatgtg--gtgtgtgt-- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708184 15 - 92844088 gtatgtg--gtatgtgt-- i rheMac8.chr10 I 4 C 0 s macFas5.chr10 96375678 15 + 96509753 gtatgtg--gtatgtgt-- i macFas5.chr10 I 4 C 0 s macNem1.NW_012014244v1 16845840 15 - 16982598 gtatgtg--gtatgtgt-- i macNem1.NW_012014244v1 I 4 C 0 s cerAty1.NW_012001373v1 3648019 15 - 3785965 gtatgtg--gtgtgtgt-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 27552 12 - 179258 ---tgtt--gtgtgtat-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519740 15 - 5823884 gtatgta--gtgtgtgt-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77 10 + 372756 gt-------gtgtatgt-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16239200 17 + 16356641 gtatgtg--gtgtgtgttt i saiBol1.JH378156 C 0 I 1345 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e chlSab2.chr2 90269392 2 - 90373283 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105947 1403 + 1231380 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=6675.000000 s hg38.chr20_KI270870v1_alt 62338 4 + 183433 gttt s panTro5.chr20 66387151 4 + 66533130 gttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067793 4 + 62195757 gcat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452885 4 - 578057 gttt i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708199 4 - 92844088 gtat i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96375693 4 + 96509753 gtat i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16845855 4 - 16982598 gtat i macNem1.NW_012014244v1 C 0 I 2 s cerAty1.NW_012001373v1 3648034 4 - 3785965 gtat i cerAty1.NW_012001373v1 C 0 I 2 s manLeu1.NW_012101652v1 27564 3 - 179258 gtg- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519755 4 - 5823884 gtat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87 2 + 372756 --gt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16240562 4 + 16356641 gttt i saiBol1.JH378156 I 1345 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e chlSab2.chr2 90269392 2 - 90373283 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105947 1403 + 1231380 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=-2346.000000 s hg38.chr20_KI270870v1_alt 62342 11 + 183433 --gt-gtgtgtcta s panTro5.chr20 66387155 11 + 66533130 --gt-gtgtgtcta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067797 7 + 62195757 --gt-gtggg---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452889 11 - 578057 --gt-gtgtgtcta i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708205 6 - 92844088 -----gtgtgt--- i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96375699 6 + 96509753 -----gtgtgt--- i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16845861 6 - 16982598 -----gtgtgt--- i macNem1.NW_012014244v1 I 2 C 0 s cerAty1.NW_012001373v1 3648040 9 - 3785965 -----gtgtgtcta i cerAty1.NW_012001373v1 I 2 C 0 s chlSab2.chr2 90269394 11 - 90373283 --gt-gtgtgtcta i chlSab2.chr2 I 2 C 0 s manLeu1.NW_012101652v1 27567 9 - 179258 -----gtatgtgtg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519759 9 - 5823884 -----gtgtgtcta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 89 10 + 372756 atgtggtgtg---- i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16240566 10 + 16356641 atgtggtctg---- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1105947 1403 + 1231380 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=7982.000000 s hg38.chr20_KI270870v1_alt 62353 2 + 183433 tg s panTro5.chr20 66387166 2 + 66533130 tg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067804 1 + 62195757 -g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452900 2 - 578057 tg i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708211 2 - 92844088 gg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375705 2 + 96509753 gg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845867 2 - 16982598 gg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648049 2 - 3785965 tg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269405 2 - 90373283 tg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27576 2 - 179258 ta i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519768 2 - 5823884 tg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101 2 + 372756 tg i calJac3.chrUn_GL286459 I 2 C 0 s saiBol1.JH378156 16240576 2 + 16356641 tg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1107350 2 + 1231380 tg i cebCap1.NW_016107870v1 I 1403 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e aotNan1.NW_018500483v1 2635662 1806 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=169121.000000 s hg38.chr20_KI270870v1_alt 62355 43 + 183433 tgtgtgtgtggtgtctatatggtgtgtatgtc---------tgtgtg-tgtgc s panTro5.chr20 66387168 52 + 66533130 tgtgtgtgtggtgtctatatggtgtgtatgtctgtgtgtgttgtgtg-tgtgc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067805 29 + 62195757 tgtgtgtgtggggtctgt-----------------------tgtgtg-tatgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452902 52 - 578057 tgtgtgtgtggtgcctatatggtgtgtatgtctgtgtgtgttgtgtg-tgtgc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708213 36 - 92844088 tgtgtatatggtgtgtatatggtgtgtatgtctgtg----------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375707 36 + 96509753 tgtgtatatggtgtgtatatggtgtatatgtctgtg----------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845869 25 - 16982598 tgtgtatatggtgtg-----------tatgtctgtg----------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648051 52 - 3785965 tgtgtgtgtggtgtctatatggtgtgtatgtctgtgtgcgttgtgtg-tgtgt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269407 52 - 90373283 tgtgtgtgtggtgtctatatggtgtgtatgtctgtgtgtgttgtgtg-tgtgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27578 28 - 179258 tatgtgtgtggtgtgtatatggtgtgta------------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519770 52 - 5823884 tgtgtgtgtggtgtctatatggtgtgtatgtctgtgtgtgttgtgtg-tgtgt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 103 40 + 372756 tgtgtgtgtgatgtgtacatggtgtgtatgtc--tg-----tgtctg------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16240578 34 + 16356641 tgtctgtgtggtgtgtatatggtgtgta-------------cgtctg------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1107352 42 + 1231380 tgtgtgtgtggtgtgtacatggtgtgtatatctgtg-----tgtctg------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2637468 43 + 11732439 tgtgtgtgtggtgtgtacatggtgtgtatgtctgtg-----tgtctgt----- i aotNan1.NW_018500483v1 I 1806 I 21 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=7405.000000 s hg38.chr20_KI270870v1_alt 62398 18 + 183433 ctgcatgtgtggggtgtg s panTro5.chr20 66387220 18 + 66533130 ctgcatgtgtggggtgtg i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452954 18 - 578057 ctgcatgtgtggagtgtg i gorGor5.CYUI01015848v1 C 0 C 0 s cerAty1.NW_012001373v1 3648103 7 - 3785965 gtct-----------acg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269459 7 - 90373283 gtct-----------gcg i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5519822 16 - 5823884 ctgcgtgtgtggg--gtg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 143 13 + 372756 -----tgtgttgtgtgtg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16240612 13 + 16356641 -----tgtgttgtgtgtg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1107394 13 + 1231380 -----tgtgttgtgtgtg i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e panPan2.chr20 62067834 0 + 62195757 C e manLeu1.NW_012101652v1 27606 0 - 179258 C e macNem1.NW_012014244v1 16845894 0 - 16982598 C e aotNan1.NW_018500483v1 2637511 21 + 11732439 I e nomLeu3.chr13 109979666 837 - 110113093 I e rheMac8.chr10 92708249 0 - 92844088 C e otoGar3.GL873542 22801005 683 + 22939663 I e macFas5.chr10 96375743 0 + 96509753 C a score=154201.000000 s hg38.chr20_KI270870v1_alt 62416 58 + 183433 tgtgt--------ggggtctgttgtgtgtatgtggtatgtgtgtatgtg------tgtgtg-gtgtgtatatg s panTro5.chr20 66387238 58 + 66533130 tgtgt--------ggggtccgttgtgtgtatgtggtatgtgtgtatgtg------tgtgtg-gtgtgtatatg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067834 33 + 62195757 ---------------ggt------------------atgtgtgtatgtg------tgtgtg-gtgtgtatatg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 452972 58 - 578057 tgtgt--------ggggtctgttgtgtgtatgtggtgtgtgtgtatgtg------tgtgtg-gtgtgtatatg i gorGor5.CYUI01015848v1 C 0 C 0 s cerAty1.NW_012001373v1 3648110 53 - 3785965 tgtgt--------ggggtctattgtgtgtatgtgatgtgtgtatatgtg------t------gtgtgtatatg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269466 58 - 90373283 tgtgt--------ggggtctgttgtgtgtatgtggtatgtgtgtatatg------tgtgtg-gtgtgtatatg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27606 14 - 179258 ---------------------------------------------------------tatg-gtgtgtatgt- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519838 58 - 5823884 tgtgt--------ggggtcttttgtgtgtatgtggtatgtgtgtatatg------tgtgtg-gtgtgtatatg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 156 69 + 372756 tgtgatgtgt---ggggtctgttgtgtgtatgtggtgtgtatatgtgtgtctgtgtgtgtg-gtgtgtatata i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16240625 71 + 16356641 tgtgttgtgtctgtgtgtgtgttgtgtgtgtgtggggggtgtgca-gggtctgt-tgtgtgtatgtgtatgtg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1107407 62 + 1231380 tgtgt----------gatctgttgtgtgtatgtggtgtgtatatgtgtgtctgtgtgtgtg-gtgtgtatatg i cebCap1.NW_016107870v1 C 0 I 24 s aotNan1.NW_018500483v1 2637532 60 + 11732439 tgtgt--------ggggtctgttgtgtgtatgtggtgtgtatatgtgtgtc----tgtgtg-gtgtgtatata i aotNan1.NW_018500483v1 I 21 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e macNem1.NW_012014244v1 16845894 0 - 16982598 C e nomLeu3.chr13 109979666 837 - 110113093 I e rheMac8.chr10 92708249 0 - 92844088 C e otoGar3.GL873542 22801005 683 + 22939663 I e macFas5.chr10 96375743 0 + 96509753 C a score=21765.000000 s hg38.chr20_KI270870v1_alt 62474 19 + 183433 gtgtgtatgtc---------------tgtatgtc s panTro5.chr20 66387296 19 + 66533130 gtgtgtatgtc---------------tgtatgtc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067867 19 + 62195757 gtgtgtatgtc---------------tgtatgtc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 453030 19 - 578057 gtgtgtatgtc---------------tgtatgtc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708249 8 - 92844088 --------------------------tgtctgca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375743 8 + 96509753 --------------------------tgtctgca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845894 8 - 16982598 --------------------------tgtctgca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648163 34 - 3785965 gtgtgtatatggtgtgtatgtctgtgtgtctgtg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269524 34 - 90373283 gtgtgtatatggtgtgtatgtctgtgtgtctgtg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27620 9 - 179258 -------------------------gtgtctgtg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519896 19 - 5823884 gtgtgtatttc---------------tgtgtctg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 225 15 + 372756 ----atacatc---------------tgtgtgtt i calJac3.chrUn_GL286459 C 0 I 22 s saiBol1.JH378156 16240696 15 + 16356641 ----gtatgtt---------------tgtgtgtg i saiBol1.JH378156 C 0 I 24 s aotNan1.NW_018500483v1 2637592 15 + 11732439 ----atgtgtc---------------tgtgtgtt i aotNan1.NW_018500483v1 C 0 I 5 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e cebCap1.NW_016107870v1 1107469 24 + 1231380 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=225515.000000 s hg38.chr20_KI270870v1_alt 62493 40 + 183433 tgtgtgtctgtgc---atttgtggg---------gtgtgtgt---agggtctgtt s panTro5.chr20 66387315 40 + 66533130 tgtgtgtctgtgc---atttgtggg---------gtgtgtgt---agggtctgtt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067886 40 + 62195757 tgtgtgtctgtgc---atttgtggg---------gtgtgtgt---agggtctgtt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 453049 40 - 578057 tgtgtgtctgtgc---atttgtggg---------gtgtgtgt---agggtctgtt i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708257 39 - 92844088 tgtgt-tgtgtgt---gtgtggtgt---------gtgtgtgt---agggtctgtt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375751 39 + 96509753 tgtgt-tgtgtgt---gtgtgttgt---------gtgtgtgt---agggtctgtt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845902 39 - 16982598 tgtgt-tgtgtgt---gtgtggtgt---------gtgtgtgt---agggtctgtt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648197 39 - 3785965 tgtgt-tgtgtgt---gtgtggtgt---------gtgtgtgt---agggtctgtt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269558 39 - 90373283 tgtgt-tgtgtgt---gtgtggtgt---------gtgtgtgt---agggtctgtt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27629 39 - 179258 tgtgt-tgtgtgt---gtgtgttgt---------gtgtgtgt---agggtctgtt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519915 38 - 5823884 tgtgt-tgtgtgt---gt-tggtgt---------gtgtgtgt---agggtctgtt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 262 38 + 372756 tgtgtgtctgtat-----gtgcgtg---------gggtgtgt---gtggtctgtt i calJac3.chrUn_GL286459 I 22 C 0 s saiBol1.JH378156 16240735 40 + 16356641 tgtgtgtctgtgt------tgtgtg---------ttgtgtgtAGGGGGGTCTGTC i saiBol1.JH378156 I 24 C 0 s cebCap1.NW_016107870v1 1107493 40 + 1231380 tgtgtgtctgtgc---atgtgtgtg---------gtgtgtgt---ggggtctgtt i cebCap1.NW_016107870v1 I 24 C 0 s aotNan1.NW_018500483v1 2637612 52 + 11732439 tgtgcgtgtgtgttgtgtgtgtgtgggggtgtgtgtgtgtgt---ggggtctgtt i aotNan1.NW_018500483v1 I 5 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47568867 1270 + 47698779 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=2328201.000000 s hg38.chr20_KI270870v1_alt 62533 272 + 183433 gtgtgtggt--gGATGGAAGGGCCTCCCGGGGCTCTTGGATTTGGAGGGCCCACGCTGCTCTGGCCTGGGAAGGTGGGGTTATCTGGAGGGTATATTAGGCTGGGGTCCTGGGGAAGGT-----TCTGGGGCTCTAGGCAGAGCT------CCTGGTCGGGTGCAGGCACATGGGCTTGTTGGGCAGTCCC----------------AGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTTCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTGTGC--------------CATCCCAGCTGC s panTro5.chr20 66387355 272 + 66533130 gtgtgtggt--gGATGGAAGGGCCTCCCGGGGCTCTTGGATTTGGAGGGCCCACGCTGCTCTGGCCTGGGAAGGTGGGGTTATCTGGAGGGTATATTAGGCTGGGGTCCCGGGGAAGGT-----TCTGGGGCTCTAGGCAGAGCT------CCTGGCCGGGTGCAGGCACATGGGCTCGTTGGGCAGTCCC----------------AGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTTCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTGTGC--------------CATCCCAGCTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62067926 272 + 62195757 gtgtgtggt--gGATGGAAGGGCCTCCCGGGGCTCTTGGATTTGGAGGGCCCACGCTGCTCTGGCCTGGGAAGGTGGGGTTATCTGGAGGGTATATTAGGCTGGGGTCCCGGGGAAGGT-----TCTGGGGCTCTAGGCAGAGCT------CCTGGCCGGGTGCAGGCACATGGGCTCGTTGGGCAGTCCC----------------AGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTTCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTGTGC--------------CATCCCAGCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 453089 271 - 578057 gtgtgtggt--gGATGGAAGGGCCTCCCAGGGCTCTTGGATTTGGAGGGCCCATGCTGCTCTGGCCCGGGAAGGTGGGGTTATCTGGAGGGTATATTAGGCTGGGGTCC-GGGGAAGGT-----TCTGGGGCTCTAGGCAGAGCT------CCTGGTTGGGTGCAGGCACATGGGCTCGTTGGGCAGTCCC----------------AGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTCCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTGTGC--------------CATCCCAGGTGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92708296 296 - 92844088 gtgtgtgGTAGGGGTGGAAGGGCCTCCCGGGGCTCTTGGATTTGGAGGGCCCATGCTGCTCTGGCCTGGGAAGTTGGGGTTATCTGGAGGGGATATTAGGCTGGGGTCACGGGGAAGGT-----TCTGGGGCTCTAGGCAGAGGTCCTGGGCCTGGCCAGGTGCAGGCATGTGGGCTAGTTGGGCAGTCCCAGGCTGACTAGGCCCAAGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTCCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTCTGC--------------CATCCTGGCTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96375790 310 + 96509753 gtgtgtgGTAGGGGTGGAAGGGCCTCCCGGGGCTCTTGGATTTGGAGGGCCCATGCTGCTCTGGCCTGGGAAGTTGGGGTTATCTGGAGGGGATATTAGGCTGGGGTCACGGGGAAGGT-----TCTGGGGCTCTAGGCAGAGGTCCTGGGCCTGGCCAGGTGCAGGCACATGGGCTAGTTGGGCAGTCCCAGGCTGACTAGGCCCAAGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTCCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTCTGCCCAGGGTCCCCAGGCATCCTGGCTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16845941 295 - 16982598 gtgtgtgGTAGGGGTGGAAGGGCCTCCCGGGGCTCTTGGATTTGGA-GGCCCATGCTGCTCTGGCCTGGGAAGTTGGGGTTATCTGGAGGGGATATTAGGCTGGGGTCACGGGGAAGGT-----TCTGGGGCTCTAGGCAGAGGTCCTGGGCCTGGCCAGGTGCAGGCACATGGGCTAGTTGGGCAGTCCCAGGCTGACTAGGCCCAAGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTCCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTCTGC--------------CATCCTGGCTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648236 296 - 3785965 gtgtgtgGTAGGGGTGGAAGGGCCTCCCGGGGCTCTTGGATTTGGAGGGCCCATGCTGCTCTGGCCTGGGAAGTTGGGGTTATCTGGAGGGGATATTAGGCTGGGGTCACGGGGAAGGT-----TCTGGGGCTCTAGGCAGAGGTCCTGGGCCTGGCCAGGTGCAGGCACATGGGCTAGTTGGGCAGTCCCAGGCTGACTGGGCCCAAGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTCCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTCTGC--------------CATCCTGGCTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269597 296 - 90373283 gtgtgtgGTAGGGGTGGAAGGGCCTCCCAGGGCTCTTGGATTTGGAAGGCCCATGCTGCTCTGGCCTGGGAAGTTGGGGTTATCTGGAGGGGATATTAGGCTGGGGTCACGGGGAAGGT-----TCTGAGGCTCTAGGCAGAGGTCCTGGGCCTGGCCAGGTGCAGGCACATGGGCCAGTTGGGCAGTCCCAGGCTGACTAGGCCCAAGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTTCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTCTGC--------------TGTCCTGGCTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27668 296 - 179258 gtgtgtgGTAGGGGTGGAAGGGCCTCCCGGGGCTCTTGGATTTGGAGGGCCCATGCTGCTCTGGCCTGGGAAGTTGGGGTTATCTGGAGGGGATATTAGGCTGGGGTCACGGGGAAGGT-----TCTGGGGCTCTAGGCAGAGGTCCTGGGCCTGGCCAGGTGCAGGCACATGGGCTAGTTGGGCAGTCCCAGGCTGACTAGGCCCAAGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTCCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTCTGC--------------CATCCTGGCTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5519953 296 - 5823884 gtgtgtgGTAGGGGTGGAAGGGCCTCCTGGGGCTCTTGGATTTGGAGGGCCCACGCTGCTCTGGCCTGGGAAGGTGGGGTTATCTGGAGGGGATGTTAGGCTGAGGTCACAGGAAAGGT-----TCTGGGGCTCTAGGCAGAGCTCCTGGGCCTGGCCAGGTGCAGGCACGTGGGCTAGTTGGGCAGTCCCAGGCTGACTAGGCCCAAGGCCTTCCAGGCTCCATGGCCCGTGTTCCCTGTTGTCCTGGTGGGTGTGCCCTTTAGGCACCTGCCCAGGGTCCCCTCTGC--------------CGTCCCATCTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 300 291 + 372756 gtgtgtgGTGGGGGTAGAAGGGCCTCCCGGAGCTCTTGGGTTTGGAGGACCTATGCTGTTCTGACCTGGGAAGGCTGG--T-TGTGGAGGGTGTATCAGGCTGGGGTCCCAGGGAAGGT-----TTTGGGGCTCCAGGCAGAGTTACTGG-CCTGGCTGGGTGTCGGCCCATGGGCTAGTTGGGCCATCCCAGGCTGACCAGGGCCAAGACCTTCAAGGCTCCATGGCCAGTGTTCTCTGTTGTCCTGGTGGGTGTGTGTTTCAGGCACCTG-CCAGAGCCCCCTCTGC--------------CATCCTAGCTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16240775 288 + 16356641 ATGTGTGGTGGGGGTGGAAGGGCCTCCCGGGGTTCTTGGGTTTGGAGGACC--CGCTGCTCTGACCTGGGAAGGCTGGGTT-TGTGGA-GGCGTGTCAGGCCGGGGTCCCAGGGAAGGT-----TCT--GGCTCAAGGCAGAGTTGCTGG-TCTGGTTGGGTGTTGGCCCATGGGCTAGTTGGGCCATCCCAGGCTGACCAGGGCCAAGACCTTCAAGGCTCCGTGGCCAGTGTTCTCTGTTGTCCTGGTGGATGTGTCTTTCAGGCACCTG-CCAGGGCCCCCTCTGC--------------CATCCTAGCTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1107533 293 + 1231380 gtgtgtggtgggggtgGAAGGGCCTCCCGGGGCTCTTGGGTTTGGAGGACCTACGCTGCTCTGACCTGGGAAGGCTGGATT-TGTGGAGGGCGTATCAGGCTGGGGTCCCAGGGAAGGT-----TCTGGCTCTCCAGGCAGAGCTACTGG-CCTGGCTGGGTGTCGGCCCGTGGGCTAGTTGGGCCATCCCAGGCTGACCAGGGCCAAGACCTTCAAGGCTCCATGGCCAGTGTTCTCTGTTGTCCTGGTGGGTGTGTCTTTCAGGCGCCTG-CCAGGGCCCCCTCTGC--------------CGTCCTAGCTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2637664 293 + 11732439 gtatgtggtgggggtgGAAGGGCCTCCCGGGGCTCTTGGGTTTGGAGGACCTACGCAGCTCTGACCTGGGAAGGCTGCGTT-TGTGGAGGGTGTATCAGGCTGGGGTCCCAGGGAAGGT-----TCTGGGGCTCCAGGCAGAGCTACTGG-CCTGGCTGGGTGTCGGCCCATGGGCTAGTTGGGCCATCCCAGGCTGACCAGGGCCAAGACCTTCAAGGCTCCATGGCCAGTGTTCTCTGTTTTCCTGGTGGGTGTGTCTTTCAGACACCTG-CTGGGGCCCCCTCTGC--------------CATCCTAGCTGC i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47570137 239 + 47698779 GTGTGC-GTGCAGGTGGGAGGGCTGCACAGGGT--TTGGACCTT-----TCCAAGCTGCTCTTACCTGCCAAGGCTGGGGTATCTAGAGGTTGAACT-GGTTGCGGCCCAGGAAGAGGTGAGGCCTCGGGGCCCTGGGCGGCGCTGGCAGGGGTGGCCGGGTTCCGG-------------TGGGCGGCGCTGGGCTGAGCAGGCCTGA----------GCCCCGAGGCCGGCGCCCCCCTGGCTGTGGGTGGGTGT--CCTTCAGGCATCTGT------------------------------------------ i canFam3.chr24 I 1270 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e nomLeu3.chr13 109979666 837 - 110113093 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=193272.000000 s hg38.chr20_KI270870v1_alt 62805 31 + 183433 CCCAACACTGTGTGCCCCGGCTCTGC--TCC----TG s panTro5.chr20 66387627 31 + 66533130 CCCAACACTGTGTGCCCCGGCTCTGC--TCC----TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62068198 31 + 62195757 CCCAACACTGTGTGCCCCGGCTCTGC--TCC----TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 453360 11 - 578057 CCCAACACTGT-------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109980503 31 - 110113093 CCCCACCCTGTGCACCCTGGCTCTGC--TCC----TG i nomLeu3.chr13 I 837 C 0 s rheMac8.chr10 92708592 31 - 92844088 CCCCACACTGTGTGCCCTGGTTCTGC--TCC----TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376100 31 + 96509753 CCCCACACTGTGTGCCCTGGTTCTGC--TCC----TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846236 31 - 16982598 CCCCACACTGTGTGCCCTGGTTCTGC--TCC----TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648532 31 - 3785965 CCCCACACTATGTGCCCTGGTTCTGC--TCC----TG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269893 31 - 90373283 CCCCACACTATGTGCCCCGGCTCTGC--TCC----TG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 27964 31 - 179258 CCCCACACTGTGTGCCCTGGTTCTGC--TCC----TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520249 33 - 5823884 CCCCACACTGTGTGCCCCGGCTCTGCCATCC----CG i colAng1.NW_012114444v1 C 0 I 3 s calJac3.chrUn_GL286459 591 29 + 372756 TCCAACCTTGGGTGCCCTGGCTTTGC--TCC------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241063 29 + 16356641 CCCCACGCTGGGTGCCCCGGCTTTGC--TCC------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1107826 31 + 1231380 CCCCACCCTGGGTGCCCCGGCTTTGC--TCCTG---- i cebCap1.NW_016107870v1 C 0 I 12 s aotNan1.NW_018500483v1 2637957 31 + 11732439 CCCCACCCTGGGTGCCCTGGCTTTGC--TCC--TG-- i aotNan1.NW_018500483v1 C 0 I 12 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47570376 0 + 47698779 C e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=103800.000000 s hg38.chr20_KI270870v1_alt 62836 28 + 183433 G--------------ACCCCACGCCGCGTGCCCCGGCTCTGC s panTro5.chr20 66387658 28 + 66533130 G--------------ACCCCACGCCGCGTGCCCCGGCTCTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62068229 28 + 62195757 G--------------ACCCCACGCCGCGTGCCCCGCCTCTGC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109980534 42 - 110113093 GACCCCGTGCTGTGTACCCCACCCTGTGTACCCCGGCTCTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92708623 28 - 92844088 G--------------ACCCCACACTCTGTGCCCCGGCTCTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376131 28 + 96509753 G--------------ACCCCACACTCTGTGCCCCGGCTCTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846267 28 - 16982598 G--------------ACCCCACACTCTGTGCCCCGGCTCTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648563 28 - 3785965 G--------------ACCCCACACTCTGTGCCCCGGCTCTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90269924 28 - 90373283 G--------------ACCCCACACTGTGTGCCCTGGCTCTGC i chlSab2.chr2 C 0 I 50 s manLeu1.NW_012101652v1 27995 28 - 179258 G--------------ACCCCACATTCTGTGCCCCGGCTCTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520285 28 - 5823884 G--------------CCCTCACACTGTGTGCCCTGGTTCTGC i colAng1.NW_012114444v1 I 3 C 0 s canFam3.chr24 47570376 5 + 47698779 -------------------------------------GCTGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e gorGor5.CYUI01015848v1 453371 0 - 578057 C e saiBol1.JH378156 16241092 0 + 16356641 C e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e calJac3.chrUn_GL286459 620 0 + 372756 C e aotNan1.NW_018500483v1 2637988 12 + 11732439 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=34575.000000 s hg38.chr20_KI270870v1_alt 62864 7 + 183433 TCCTGGA s panTro5.chr20 66387686 7 + 66533130 TCCTGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62068257 7 + 62195757 TCCTGGA i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109980576 7 - 110113093 TCCTGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92708651 7 - 92844088 TCCTGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376159 7 + 96509753 TCCTGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846295 7 - 16982598 TCCTGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648591 7 - 3785965 TCCTGGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 28023 7 - 179258 TCCTGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520313 7 - 5823884 TCCTGGA i colAng1.NW_012114444v1 C 0 C 0 s canFam3.chr24 47570381 7 + 47698779 CCCTGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e chlSab2.chr2 90269952 50 - 90373283 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e gorGor5.CYUI01015848v1 453371 0 - 578057 C e saiBol1.JH378156 16241092 0 + 16356641 C e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e calJac3.chrUn_GL286459 620 0 + 372756 C e aotNan1.NW_018500483v1 2637988 12 + 11732439 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=36250.000000 s hg38.chr20_KI270870v1_alt 62871 11 + 183433 CCCCACGCCGT s panTro5.chr20 66387693 11 + 66533130 CCCCACGCCGT i panTro5.chr20 C 0 T 66 s panPan2.chr20 62068264 11 + 62195757 CCCCACGCCGT i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109980583 11 - 110113093 CCCCGTGCTGT i nomLeu3.chr13 C 0 I 14 s rheMac8.chr10 92708658 11 - 92844088 CCCCACACTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376166 11 + 96509753 CCCCACACTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846302 11 - 16982598 CCCCACACTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648598 11 - 3785965 CCCCACACTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270002 11 - 90373283 CCCCACACTAT i chlSab2.chr2 I 50 C 0 s manLeu1.NW_012101652v1 28030 11 - 179258 CCCCACACTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520320 11 - 5823884 CCCCACACTAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 620 1 + 372756 ----------T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241092 1 + 16356641 ----------T i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47570388 5 + 47698779 -CCCTT----- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e gorGor5.CYUI01015848v1 453371 0 - 578057 C e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e aotNan1.NW_018500483v1 2637988 12 + 11732439 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=19662.000000 s hg38.chr20_KI270870v1_alt 62882 3 + 183433 GTG s panTro5.chr20 66387638 3 + 66533130 GTG i panTro5.chr20 T 66 C 0 s nomLeu3.chr13 109980608 3 - 110113093 GTA i nomLeu3.chr13 I 14 C 0 s rheMac8.chr10 92708669 3 - 92844088 GTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376177 3 + 96509753 GTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846313 3 - 16982598 GTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648609 3 - 3785965 GTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270013 3 - 90373283 GTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 28041 3 - 179258 GTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520331 3 - 5823884 GTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 621 3 + 372756 GTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241093 3 + 16356641 GTG i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47570393 3 + 47698779 GCG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 204077 1851 - 397369 I e panPan2.chr20 62068275 0 + 62195757 C e gorGor5.CYUI01015848v1 453371 0 - 578057 C e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e aotNan1.NW_018500483v1 2637988 12 + 11732439 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=24677.000000 s hg38.chr20_KI270870v1_alt 62885 4 + 183433 CCCT s panTro5.chr20 66387641 4 + 66533130 CCCC i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109980611 4 - 110113093 CCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92708672 4 - 92844088 CCCT i rheMac8.chr10 C 0 I 147 s macFas5.chr10 96376180 4 + 96509753 CCCT i macFas5.chr10 C 0 I 147 s macNem1.NW_012014244v1 16846316 4 - 16982598 CCCT i macNem1.NW_012014244v1 C 0 I 327 s cerAty1.NW_012001373v1 3648612 4 - 3785965 CCCT i cerAty1.NW_012001373v1 C 0 I 38 s chlSab2.chr2 90270016 4 - 90373283 CCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 28044 4 - 179258 CCCT i manLeu1.NW_012101652v1 C 0 I 5547 s colAng1.NW_012114444v1 5520334 4 - 5823884 CCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 624 4 + 372756 CCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241096 4 + 16356641 CCTT i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47570396 4 + 47698779 GCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 205928 4 - 397369 CCCT i dasNov3.JH569290 I 1851 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e panPan2.chr20 62068275 0 + 62195757 C e gorGor5.CYUI01015848v1 453371 0 - 578057 C e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e aotNan1.NW_018500483v1 2637988 12 + 11732439 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=35839.000000 s hg38.chr20_KI270870v1_alt 62889 8 + 183433 GGCTCTGC s panTro5.chr20 66387645 8 + 66533130 GGCTCTGC i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109980615 8 - 110113093 GGCTCTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92708823 8 - 92844088 GGCTCTGC i rheMac8.chr10 I 147 C 0 s macFas5.chr10 96376331 8 + 96509753 GGCTCTGC i macFas5.chr10 I 147 C 0 s macNem1.NW_012014244v1 16846647 8 - 16982598 GGCTCTGC i macNem1.NW_012014244v1 I 327 C 0 s cerAty1.NW_012001373v1 3648654 8 - 3785965 GGCTCTGC i cerAty1.NW_012001373v1 I 38 C 0 s chlSab2.chr2 90270020 8 - 90373283 CGCTCTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 33595 8 - 179258 GGCTCTGC i manLeu1.NW_012101652v1 I 5547 C 0 s colAng1.NW_012114444v1 5520338 8 - 5823884 GGCTCTGC i colAng1.NW_012114444v1 C 0 I 10 s canFam3.chr24 47570400 5 + 47698779 TGCTC--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 205932 8 - 397369 GACTCCGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e panPan2.chr20 62068275 0 + 62195757 C e gorGor5.CYUI01015848v1 453371 0 - 578057 C e saiBol1.JH378156 16241100 0 + 16356641 C e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e calJac3.chrUn_GL286459 628 0 + 372756 C e aotNan1.NW_018500483v1 2637988 12 + 11732439 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=15111.000000 s hg38.chr20_KI270870v1_alt 62897 5 + 183433 TCCTG------- s panTro5.chr20 66387653 5 + 66533130 TCCTG------- i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 109980623 5 - 110113093 TCCTG------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92708831 5 - 92844088 TCCTG------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376339 5 + 96509753 TCCTG------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846655 5 - 16982598 TCCTG------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648662 5 - 3785965 TCCTG------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270028 5 - 90373283 TCCTG------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 33603 5 - 179258 TCCTG------- i manLeu1.NW_012101652v1 C 0 C 0 s dasNov3.JH569290 205940 11 - 397369 -CCTGCCCTACA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e canFam3.chr24 47570405 0 + 47698779 C e colAng1.NW_012114444v1 5520346 10 - 5823884 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e panPan2.chr20 62068275 0 + 62195757 C e gorGor5.CYUI01015848v1 453371 0 - 578057 C e saiBol1.JH378156 16241100 0 + 16356641 C e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e calJac3.chrUn_GL286459 628 0 + 372756 C e aotNan1.NW_018500483v1 2637988 12 + 11732439 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=45630.000000 s hg38.chr20_KI270870v1_alt 62902 13 + 183433 GACCCCACGCCGC s panTro5.chr20 66387658 13 + 66533130 GACCCCACGCCGC i panTro5.chr20 C 0 I 33 s nomLeu3.chr13 109980628 13 - 110113093 GACCCCACCCTGT i nomLeu3.chr13 C 0 I 14 s rheMac8.chr10 92708836 13 - 92844088 GACCCCACACTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376344 13 + 96509753 GACCCCACACTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846660 13 - 16982598 GACCCCACACTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648667 13 - 3785965 GACCCCACACTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270033 13 - 90373283 GACCCCACACTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 33608 13 - 179258 GACCCCACACTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520356 13 - 5823884 GCCCCCACACCGT i colAng1.NW_012114444v1 I 10 C 0 s canFam3.chr24 47570405 2 + 47698779 ------AC----- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 205951 13 - 397369 AGCCCCACCCCGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e panPan2.chr20 62068275 0 + 62195757 C e gorGor5.CYUI01015848v1 453371 0 - 578057 C e saiBol1.JH378156 16241100 0 + 16356641 C e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e calJac3.chrUn_GL286459 628 0 + 372756 C e aotNan1.NW_018500483v1 2637988 12 + 11732439 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=76076.000000 s hg38.chr20_KI270870v1_alt 62915 14 + 183433 -GTGCCCC-------GGCTCTG s panTro5.chr20 66387704 14 + 66533130 -GTGCCCC-------TGCTCTG i panTro5.chr20 I 33 C 0 s panPan2.chr20 62068275 14 + 62195757 -Gtgcccc-------tgctctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 453371 14 - 578057 -Gtgcccc-------ggctctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109980655 14 - 110113093 -GCACCCT-------GGCTCTG i nomLeu3.chr13 I 14 C 0 s rheMac8.chr10 92708849 14 - 92844088 -GTGCCCT-------GGCTCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376357 14 + 96509753 -GTGCCCC-------GGCTCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846673 14 - 16982598 -GTGCCCC-------GGCTCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648680 14 - 3785965 -GTGCCCC-------GGCTCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270046 14 - 90373283 -GTGCCCC-------GGCTCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 33621 14 - 179258 -GTGCCCC-------GGCTCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520369 14 - 5823884 -GTGCCCC-------GGCTCTG i colAng1.NW_012114444v1 C 0 C 0 s canFam3.chr24 47570407 8 + 47698779 -GTCCCCA-------G------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 205964 22 - 397369 CATCCGCCATCGAGTGGCTTTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e saiBol1.JH378156 16241100 0 + 16356641 C e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e calJac3.chrUn_GL286459 628 0 + 372756 C e aotNan1.NW_018500483v1 2637988 12 + 11732439 I e otoGar3.GL873542 22801005 683 + 22939663 I a score=76666.000000 s hg38.chr20_KI270870v1_alt 62929 14 + 183433 CTCCTGGACCTCCG s panTro5.chr20 66387718 14 + 66533130 CTCCTGGACCTCCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62068289 14 + 62195757 ctcctggacctccg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 453385 14 - 578057 ctcctggacctccg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109980669 14 - 110113093 CTCCTGGACCTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92708863 14 - 92844088 CTTTTGGACCTCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376371 14 + 96509753 CTTTTGGACCTCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846687 14 - 16982598 CTTTTGGACCTCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648694 14 - 3785965 CTTTTGGACCTCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270060 14 - 90373283 CTTTTGGACCTCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 33635 14 - 179258 CTTTTGGACCTCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520383 14 - 5823884 CTTTTGGACTTCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 628 6 + 372756 --------CCTTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241100 6 + 16356641 --------CCTTCA i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22801688 14 + 22939663 CCCCTGCACCTGCC i otoGar3.GL873542 I 683 C 0 s canFam3.chr24 47570415 2 + 47698779 ------------CA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 205986 10 - 397369 ----CTAAGTTCCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e cebCap1.NW_016107870v1 1107857 12 + 1231380 I e aotNan1.NW_018500483v1 2637988 12 + 11732439 I a score=2728907.000000 s hg38.chr20_KI270870v1_alt 62943 265 + 183433 ---CATGCCTCCTGCT--CACTCCAGGGCAGAAACCTCCTG------TCCTGGCTCTGCCTCCCTTTGAAGCCTAGCAGGGGACCCCTCTGGCCCTG-GGTCTGTCCCT-CCTGAGCTCTCATTTGAGGAAGGCACCAGTGAGGCCCTTCTT-------TGGCTCAGATCCAGCCTTTGGTGCCAGACGGTCCAGGGCGTCAGTCCCAGCTTTGTCTGGGAGCTGCGGGCCCTCGACCCTTCTGAGCCC-ACCT--ACAAGTTGGGAACAACATTGTGGACCCTCAGG s panTro5.chr20 66387732 265 + 66533130 ---CATGCCTCCTGCT--CACTTCAGGGCAGAAACCTCCTG------TCCTGGCTCTGCCTCCCTTTGAAGCCTAGCAGGGGACCCCTCTGGCCCTG-GGTCTGTCCCT-CCTGAACTCTCATTTGAGGAAGGCACCAGTGAGGCCCTTCTT-------TGGCTCAGATCCAGCCTTTGGTGCCAGACGGTCCAGGGCGTCAGTCCCAGCTTTGTCTGGGAGCTGCGGGCCCTCGACCCTTCTGAGCCC-ACCT--ACAAGTTGGGAACAACATTGTGGACCCTCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62068303 262 + 62195757 ---catgcctcctgct--cACTCCAGGGCAGAAACCTCCTG------TCCTGGCTCTGCCTCCCTTTGAAGCCTAGCAGGGGACCCCTCTGGCCCTG-GGTCTGTCCCT-CCTGAACTCTCATTTGAGGAAGGCACCAGTGAGGCC---CTT-------TGGCTCAGATCCAGCCTTTGGTGCCAGACGGTCCAGGGCGTCAGTCCCAGCTTTGTCTGGGAGCTGCGGGCCCTCGACCCTTCTGAGCCC-ACCT--ACAAGTTGGGAACAACATTGTGGACCCTCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 453399 263 - 578057 ---catgcctcctgct--cACTCCAGGGCAGAAACCTCCTG------TCCTGGCTCTG-CTCCCTTTGAAGCCTAGCAGGGGA-CCCTCTGTCCCTG-GGTCTGTCCCT-CCTGAGCTCTCATTTGAGGAAGGCACCAGTGAGGCCCTTCTT-------TGGCTCAGATCCAGCCTTTGGTGCCAGACGGTCCAGGGCGTCAGTCCCAGCTTTGTCTGGGAGCTGCGGGCCCTCGACCCTTCTGAGCCC-ACCT--ACAAGTTGGGAACAACATTGTGGACCCTCAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109980683 263 - 110113093 ---CATGCCTCCTGCT--CACTCCAGGGCAGAAACCTCCTG------TCCTGGCTCTGCCTCCCTTTGAAGCCTAGCAGGGGACCCCTCTGGCCCTG-GGTCTGTCCCT-CCTGAACTCTCATTTGAGGAAGGCACCAGTGAGGCCATTCTT-------TGGCTCAGATCCAGCCTTTGGTGCTAGACGGTCCAGGGCGTCAGTCCCAGCTTTGTCTGGGAGCTGCGGGCCCTCGACCCTTCTGAGCCC-ACCT--ACAAGTTGGGAACAACACTGTGGACCCTC--G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92708877 264 - 92844088 ---TATGCCTTCTGCT--CGCTCCAGGGCAGAAACCTCCTG------TGCTGGCTCTGCCTTCCTTTAAAGCCTAGCA-GGGACTCCTCCGGCCCTG-GGTCTGTCCCT-CCTGAGCTCTCATTTGAGGAAGGCATCAGTGAGGCCCTTCTT-------TGGCTCAGATCcagcctttggtgccagacagtccagggcgtcagtcccagctttgtctgggagctgtgggcccttgacccttctgagccc-acct--acaagttgggaacaacactgtggaccctcagg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376385 264 + 96509753 ---TATGCCTTCTGCT--CGCTCCAGGGCAGAAACCTCCTG------TGCTGGCTCTGCCTTCCTTTAAAGCCTAGCA-GGGACTCCTCCGGCCCTG-GGTCTGTCCCT-CCTGAGCTCTCATTTGAGGAAGGCATCAGTGAGGCCCTTCTT-------TGGCTCAGATCCAGCCTTTGGTGCCAGACAGTCCAGGGCGTCAGTCCCAGCTTTGTCTGGGAGCTGTGGGCCCTTGACCCTTCTGAGCCC-ACCT--ACAAGTTGGGAACAACACTGTGGACCCTCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846701 264 - 16982598 ---TATGCCTTCTGCT--CGCTCCAGGGCAGAAACCTCCTG------TGCTGGCTCTGCCTTCCTTTAAAGCCTAGCA-GGGACTCCTCCGGCCCTG-GGTCTGTCCCT-CCTGAGCTCTCATTTGAGGAAGGCATCAGTGAGGCCCTTCTT-------TGGCTCAGATCcagcctttggtgccagacagtccagggcgtcagtcccagctttgtctgggagctgtgggcccttgacccttctgagccc-acct--acaagttgggaacaacactgtggaccctcagg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648708 264 - 3785965 ---TATGCCTTCTGCT--CGCTCCAGGGCAGAAACCTCCTG------TCCTGGCTCTGCCTTCCTTTGAAGCCTAGCA-GGGACTCCTCCGGCCCTG-GGTCTGTCCCT-CCTGAGCTCTCATTTGAGGAAGGCATCAGTGAGGCCCTTCTT-------TGGCTCAGATCcagcctttggtgccagacagtccagggcgtcagtcccagctttgtctgggagctatgggcccttgacccttctgagccc-acct--acaagttgggaacaacactgtggaccctcagg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270074 264 - 90373283 ---TATGCCTTCTGCT--CGCTCCAGGGCAGAAACCTCCTG------TCCTGGCTCTGCCTTCCTTTGAAGCCTAGCA-GGGACTCCTCCGGCCCTG-GGTCTGTCCCT-CCTGAGCTCTCATTTGAGGAAGGCATCAGTGAGGCCCTTCTT-------TGGCCCAGATCCAGCCTTTGGTGCCAGACAGTCCAGGGCGTCAGTCCCAGCTTTGTCTGGAAGCTGTGGGCCCTTGACCCTTCTGAGCCC-ACCT--ACAAGTTGGGAACAACACTGTGGACCCTCAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 33649 264 - 179258 ---TATGCCTTCTGCT--CGCTCCAGGGCAGAAACCTCCTG------TCCTGGCTCTGCCTTCCTTTGAAGCCTAGCA-GGGACTCCTCCGGCCCTG-GGTCTGTCCCT-CCTGAGCTCTCATTTGAGGAAGGCATCAGTGAGGCCCTTCTT-------TGGCTCAGATCcagcctttggtgccagacagtccagggcgtcagtcccagctttgtctgggagctgtgggcccttgacccttctgagccc-acct--acaagttgggaacaacactgtggaccctcagg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520397 264 - 5823884 ---TATGCCTTCTGCT--CGCTCCAGGGCAGAAACCTCCTA------TCCTGGCTCTGCCTCCCTTTGAAGCCTAGCA-GGGACTCCTCCGGCCCTG-GGTCTGTCCCT-CCTGGGCTCTCATTTGAGGAAGGCATCAGTGAGGCCCTTCTT-------TGGCTCAGATCcagcctttggtgccagacggtccagggcatcagtcccagctttgtctgggagctgtgggcccttgacccttctgagccc-acct--acaagttgggaacaacactgtggaccctcagg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 634 266 + 372756 ---CATGCTTCCTGCT--CGCTCCAGGGCAGGAACCTCCTG------TCCTGGCTCTGCCTCCCTTGGAACCCTAGTAGGGAGCCCGTCCGGCCCTG-GGCCTGTCCTTGCCTGAGCTCTCATTTGAGGAAGGCACCAGTGAGGCCCTTCTT-------TGGCTCAGATCCAGCCTTCGGTGCCAGACAGTCCAGGGCATAAGTCTCAGCTTTGTCTGGGAGCTGCGGGCCCCCGACCCTTCTGAGCCC-ACCT--ACAAGTCAGGAACAACACTGTCAGCCCTCAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241106 266 + 16356641 ---CATGCTTCCTGCT--CGCTCCAGGGCAGGAACCTCCTG------TCCTGGCTCTGCCTCCCTTGGAACCCTAGCAGGGAACCCCTCCAGCCCTG-GGCCTGTCCCCGCCTGAGCTCTCATTTGAGAAAGGCACCAGTGAGGCCCTTCTT-------TGGCTGAGATCCAGCCTTTGGTGCCAGACGGTCCAGGGCATCAGTCTCAGCTTTGTCTGGGAGCTGCGGGCCCCTGACCCTTCTGAGCCC-ACCT--ACAAGTCAGGAACAACACTGTCGGCCCTCAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1107869 265 + 1231380 ---CATGCTTCCTGCT--TGCTCCAGGGCAGGAACCTCCTG------TCCTGGCTCTGCCTCCCTTGGAACCCTAGCAGGGAACCCTTCCGG-CCTG-GGCCTGTCCCTGCCTGAGCTCTCATTTGAGGAAGGCACCAGTGAGGCCCTTCTT-------TGGCTCAGATCCAGCCTTTGGTGCCAGACAGTCCAGGGCATCAGTCTCAGCTTTGTCTGGGAGCTGCGGGCCCCCAACCCTTCTGAGCCC-ATCT--ACAAGTCAGGAACAACACTGTCAGCCCTCAGG i cebCap1.NW_016107870v1 I 12 C 0 s aotNan1.NW_018500483v1 2638000 265 + 11732439 ---CATGCTTCCTGCT--CGCTCCAGGGCAAGAACCTCCTT------TCCTGGCTCTGCCTCCCTGGGAACCCTAACAGGGAACCCCTCCGGCCCTG-GGCCTGTCCCCGCCTGAGCTGTCATTTGAGGAAGGCACCAGTGAGGCCCTTCTT-------TGACTCAGATCCAGCCTTT-GTGCCAGACAGTCCAGGGCGTCAGTCTCAGCTTTGTCTGGGAGCTGCAGGCCCCCAACCCTTCTGAGCCC-ACCT--ACAAGTCAGGAACAACACTGTCGGCCCTCGGG i aotNan1.NW_018500483v1 I 12 C 0 s otoGar3.GL873542 22801702 271 + 22939663 ---CACACCTGCTGGTGCCTATTCTGCTCATGTGCCTATTGAGTGTATCCTGACTCTG--TCCCT---GACCTCACCA-CAGGCTCCTCCTTACCTGTGGCCCTTCATTGCCTGAGCTCTCAGCAGAGGAG-----CCCTTAGGTTGCTCTGATGCAGATGGCTCCAGTTCAGCCCTTGGCACCAATCTGT-CACTGTGCCAGTCCTGGCTCTATCTTGGAGTTGTGGTTCTTCGGCCCTTCTGAGCCAGGTCT--GTTTATCTTGAGTGACAGTGTGGGCCTTGGGG i otoGar3.GL873542 C 0 I 72 s canFam3.chr24 47570417 173 + 47698779 ---GGTGCTCCCTGCT--CACTCCAGCGCCGGGA-----TG------------------CTTCCT--------CACCAGAGGTTCCCTGAAG------AACCATTTCCC-AGGGAGCTCCAACTCGAGGAAGGTGCCCCCAAGGCCTCTCGA--------------GGTGCAG-----GGGGCCAGACG----------------------------------------------------CCGGCCCC-ACCTTCGCAAGTCAGGAGGAGCAGCGTTGGCTTGTAGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 205996 177 - 397369 CCTGACGCCTCCTGCC--CCCTCCTCGCTG-----CCCCCG------CCCCAGCGCTGCCTCTCTT-------------GGAGCCCACTCGGCCCCT---CCTCTCCCC--------------TTGAGGATGACACCCTCGAGGCCTCTCTG-------TG--------------------GCCAGA------AGGGCTTCA--------CCTGTCT--GAGCTGGGAGGC-----ACCTGTTGACCTC-------ACAGG---------GCCCCGGGGGCCCT---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I a score=2069272.000000 s hg38.chr20_KI270870v1_alt 63208 234 + 183433 GGACTAAA-GGATGAAGCTGCCCTGTGCCCGGCACCAATAGGAGC-ATCCTCGTTCCTCCTCCTCAGGGGCTGGACCCATAGCTTGAGTGGCAGTGGGGA-----------------------------------------------------------------------------------------------------------CATCC----------------------------AACCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGGTGTGCTTGTTGGAATGATGGGGGATCTCGCTCTGGGATCTGTCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGG s panTro5.chr20 66387997 234 + 66533130 GGACTAAA-GGATGAAGCTGCCCCGTGCCCGGCAACAATGGGAGC-ATCCTCGTTCCTCCTCCTCAGGGGCTGGACCCATAGCTTGAGTGGCAGTGGAGA-----------------------------------------------------------------------------------------------------------CATCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGGTGTGCTTGTTGGAATGATGGGGGATCTCGCTCTGGGATCTGTCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62068565 234 + 62195757 GGACTAAA-GGATGAAGCTGCCCCGTGCCCGGCAACAATGGGAGC-ATCCTCGTTCCTCCTCCTCAGGGGCTGGACCCATAGCTTGAGTGGCAGTGGAGA-----------------------------------------------------------------------------------------------------------CATCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGGTGTGCTTGTTGGAATGATGGGGGATCTCGCTCTGGGATCTGTCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 453662 231 - 578057 GGACTAAA-GGGTGAAGCTGCCCCGTGCCCGGC-CCGATGGGAGC-ATCCTC-TTCCTCCTCCTCAGGGGCTGGACCCATAGCTTGAGTGGCAGTGGGGA-----------------------------------------------------------------------------------------------------------CATCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGGTGTGCTTGTTGGAATGGT-GGGGATCTCGCTCCGGGATCTGTCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109980946 234 - 110113093 GGACTAAA-GGATGAAGCTGCCCCGTGCCTGGTACCAATGGGAGC-ATCCTTGTTCCTCCTCCTCAGGGGCGGGACCCATGGCCTGAGTGGCAGTGGGGA-----------------------------------------------------------------------------------------------------------CATCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CGTGGGAGTGCTCAGGGTGTGCTTGCTGGAATGGTGGGGGATCTGGCTCCAGGATCTGTCTCCTAGACCCTGTCCAGGGCTCCAACTGCCCC-TTCCCTCTCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92709141 290 - 92844088 gAACTAAA-GGATGAAACTGCCCTGTGGCTGGCACCAATGGGAGC-ATCCTCATTCCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGGCAGTGGGGACATCCAGCCTGGCTTCCTCAGTGGGGTTTGTC---------------------------------------------------CAGCCTGGCTTCCTCAGTGGGGTTTGTCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGGTGTGCTTGTTGGAATGGTAGGGGAGCTGGCTCCAGGGTCTGCCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376649 290 + 96509753 GAACTAAA-GGATGAAACTGCCCTGTGGCTGGCACCAATGGGAGC-ATCCTCGTTCCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGGCAGTGGGGACATCCAGCCTGGCTTCCTCAGTGGGGTTTGTC----------------------------CAGCCTGGCTTCCTCAGTGGGGTT-----------------------TGTCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGGTGTGCTTGTTGGAATGGTAGGGGAGCTGGCTCCAGGGTCTGCCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16846965 290 - 16982598 gAACTAAA-GGATGAAACTGCCCTGTGGCTGGCACCAATGGGAGC-ATCCTCGTTCCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGGCAGTGGGGACATCCAGCCTGGCTTCCTCAGTGGGGTTTGTC----------------------------CAGCCTGGCTTCCTCAGTGGGGTT-----------------------TGTCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGGTGTGCTTGTTGGAATGGTAGGGGAGCTGGCTCCAGGGTCTGCCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3648972 290 - 3785965 gAACTAAA-GGATGAAACTGCCCTGTGGCTGGCACCAATGGGAGC-ATCCTCGTTCCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGGCAGTGGGGACATCCAGCCTGGCTTCCTCAGTGGGGTT-------------------------------------------------------------------------------TGTCCAGCCTGGCTTCCTCAGTGGGGTTTGTCCAGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CTTGGAGGTGCTCAGGGTGTGCTTGTTGGAATGGTGGGGGAGCTGGCTCCAGGGTCTGCCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270338 318 - 90373283 GAACTAAA-GGATGAAACTGCCCTGTGGCTGGCATCAATGGGAGC-ATCCTCGTTCCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGGCAGTGGGGACATCCAGCCTGGCTTCCTCAGTGGGGTTTGTCCAGCCTGGCTTCCTCAGTGGGGTTTGTCCAGCCTGGCTTCATCAGTGGGGTT-----------------------TGTCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGGTGTGCTTGTTGGAATGGTGGGGGAGCTGGCTCCAGGGTCTGCTTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 33913 290 - 179258 gAACTAAA-GGATGAAACTGCCCTGTGGCTGGCACCAATGGGAGC-ATCCTCGTTCCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGGCAGTTGGGACATCCAGCCTGGCTTCCTCAGTGGGGTTTGTCCAGCCTGGCTTCC----------------------------TCAGTGGGGTT-----------------------TGTCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGC--------------------------------------------------------CGTGGAGGTGCTCAGGGTGTGCTTGTTGGAATGGTGGGGGAGCTGGCTCCAGGGTCTGCCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520661 318 - 5823884 gAACTAAA-GGATGAAACTGCCCTGTGGCTGGCACCAATGGGAGC-ATCCTCGTTCCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGGCAGTGGGGACATCCAGCCTGGCTTCCTCAGTGGGGTT-------------------------------------------------------------------------------TGTCC----------------------------AGCCTGGCTTCCTCAGTGGGGTTTGGCCAGCCTGGCTTCCTCAGTGGGGTTTGGCCAGCCTGGCTTCCTCAGTGGGGTTTGGTCATGGAGGTGCTCAGGGTGTGCTTGTTGGAATGATGGGGGAGCTGGCTCCAGGGTCTGTCTCCTAGACCCTGTCCAGGGCTCCAGCTGCCCC-TTCCCTCTCTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 900 234 + 372756 GGACTCCATGGATGAAGCTGCCTGGTG-CTGGCATGGATGGGAGT-GTCCTCGTTTCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGGCTGTGGGGA-----------------------------------------------------------------------------------------------------------CATCC----------------------------AGCGTAGCACCCTCAGTGGGATTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGTTGTGCTGGTTGGAATGGTAGGGGAGCTGGCTCGAGCATCTGTCTCCCAGAACCTGTTCGGGGCTCCAGCTGACCC-TTCCCTCTCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241372 233 + 16356641 GGACTCCATGGATGAAGCTGCCCAGTG-CTGGCATTGATGGGAGT-GTCCGCGTTTCTCCTCCTGAGGGGCTGGACCCATGGCTTGAGTGGCTGTAGGGA-----------------------------------------------------------------------------------------------------------CATCC----------------------------ATTGCCGCACCCTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCAGGTTGTGCTGG-TGGGATGGTAGGGGAGCTGGCTTTAGCATCTGTCTCCCAGACCCTGTCCGGGGCTCCAGCTGACCC-TTCCCTCTCTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1108134 233 + 1231380 GGACTCCATGGATGAAGCTGCCTGGTG-ATGGCATGGATGGGAGT-GTCCTCGTTTCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGGTTGTGGGGA-----------------------------------------------------------------------------------------------------------CATCC----------------------------AGCGCAGCGCCCTCAGTGGGGTTTGGC--------------------------------------------------------CGTGGAGGTGCTCGGGTTGTGTTGG-TGGGATGGTAGGGGAGCTGGCTCCAGCATCTGTCTCTCAGACCCTGTCCGGGGCTCCAGCTGATCC-TTCCCTCTCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2638265 234 + 11732439 GGACTCCATGGATGAAGCTGCCTGGTG-ATGGCATGGATGGGAGG-GTCCTCGTTTCTCCTCCTCAGGGGCTGGACCCATGGCTTGAGTGTCTGTGGGGA-----------------------------------------------------------------------------------------------------------CATCC----------------------------AGCGCAGCTCCGTCAGTGGGGTTTGGC--------------------------------------------------------CATGGAGGTGCTCCGGTTGTGCTGGTTGGAATGGTAGGGGAGCTGGCTCCAGCATCTGTCTCCCAGACCCTGTCCGGGGCTCCAGCTGACCC-TTCCCTCTCTGG i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47570590 191 + 47698779 -GCCCCCT-GCGGGCAGGTGCCTGGAC-CCAGCAGAGAAGGGGTG-GCCCCGGCTCCTCCTCC-CAGGGGCTGGAGCTGAGGGTCAAGTAG--------------------------------------------------------------------------------------------------------------------CCGGT----------------------------AGCCTGGC-TCCTTGGTGGG--TTGGT----------------------------------------------------------------------------GTTTGTCGGGATGACAGGA---------CCAGTTCCCCCGCCACTGGCTCTGCCGAGGGCCCCAGCTGCCCTGTGTCCGTTCTGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 206173 158 - 397369 GGGCACAG-GGCTGGGGGT---------CCTGCACAGGCGGAAGCTCTTCTCGTGCCTACTCCTCGGGGGCTGGGC-----------------------------------------------------------------------------------------------------------------------------------CGTCC----------------------------TGCCTGGGGCCCCC---------TGAG--------------------------------------------------------CA----------------GAGTTGGTTGGGGTGATGGGGAGCCCAGCCCT-------------------CCGTTCAAGTCTTGGGGTGCTCC-TTCCTCCACTGG i dasNov3.JH569290 C 0 I 1198 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e otoGar3.GL873542 22801973 72 + 22939663 I a score=1204680.000000 s hg38.chr20_KI270870v1_alt 63442 132 + 183433 GC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTGTAGAGCCCCTGTGGTCGGCTCCCACCCCT-CCCCAGAGTGCTGCATG----TGAGGATGGGGACTGCCT-----------CACTCAGGAAGCCATC-CTGTCAT-CCCAGAG s panTro5.chr20 66388231 132 + 66533130 GC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTGTAGAGCCCCTGTGGTCGGCTCCCACCCCT-CCCTAGAGTGCTGCATG----TGAGGATGGGGACTGCCT-----------CACTCAGGAAGCCATC-CTGTCAT-CCCAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62068799 132 + 62195757 GC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTGTAGAGCCCCTGTGGTCGGCTCCCACCCCT-CCCTAGAGTGCTGCATG----TGAGGATGGGGACTGCCT-----------CACTCAGGAAGCCATC-CTGTCAT-CCCAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 453893 131 - 578057 GC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTGTAGAGCCCCTGTGGT-GGCTCCCACCCCT-CCCCAGCGTGCTGCATG----TGAGGATGGGGGCTGCCT-----------CACTCGGGAAGCCATC-CTGTCAT-CCCAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981180 132 - 110113093 GC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTGTAGAGCCCCTGTGGTCGGCTCCCACCCCT-CCCTAGAGTGCTGCATG----TGAGGGTGGGGGCTCCCT-----------CACTCAGGAAGCCATC-CTGTCAT-CCCAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92709431 133 - 92844088 AC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTCTAGAGCCCCTGTGGTTGGCTCCCACCCCTTCCCCAGAGTGATGTATG----TGAGGATGGGGGCTTCTT-----------CACTCAGGAAGTCGTC-CTGTCAT-CCCAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96376939 133 + 96509753 AC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTCTAGAGCCCCTGTGGTTGGCTCCCACCCCTTCCCCAGAGTGATGTAAG----TGAGGATGGGGGCTTCTT-----------CACTCAGGAAGTCGTC-CTGTCAT-CCCAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847255 133 - 16982598 AC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTCTAGAGCCCCTGTGGTTGGCTCCCACCCCTCCCCCAGAGTGATGTATG----TGAGGATGGAGGCTTCTT-----------CACTCAGGAAGTCGTC-CTGTCAT-CCCAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649262 133 - 3785965 AC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTCTAGAGCCCCTGTGGTTGGCTCCCACCCCTCCCCCAGAGTGATGCATG----TGAGGATGGGGGCTTCTT-----------CACTCAGGAAGTCGTC-CTGTCAT-CCCAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270656 133 - 90373283 AC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTCTAGAGCCCCTGTGGTTGGCTCCCACCCCTCCCCCAGAGTGATGCATG----TGAGGATGGGGGCTTCTT-----------CACTCAGGAAGTCGTC-CTGTCAT-CCCAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34203 133 - 179258 AC-------TCCCAGCTGGGATGGGAGGGCCTTGGGCACAGGCTCTAGAGCCCCTGTGGTTGGCTCCCACCCCTTCCCCAGAGTGATGCATG----TGAGGATGGGGGCTTCTT-----------CACTCAGGAAGTCGTC-CTGTCAT-CCCAGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5520979 133 - 5823884 GC-------TCCTAGCTGGGATGGGAGGGCCTTGGGCACAGGCTCTAGAGCCCCTGTGGTTGGCTCCCACCCCTCCCCCAGAGTGATGCATG----TGAGGATGGGGGCTTCTT-----------CACTCAGGAAGTCGTC-CTGTCAT-CCCAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1134 124 + 372756 GCCCTGGGTCCCCAGCTGGGATG----------------AGGCTCTGGAGCCCCTGTGGTCAGCTCCCACCCCTCCCTGAGAGTGCTGCATG----TGAGGATGGGGGCTCCTT-----------CACTCAGGAAGCCGTC-CTGTCAT-CCCAGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241605 124 + 16356641 GCCCTGGGTCCCCAGCTGGGATG----------------AGGCTCTGGAGCCCCTGTGGTCGGCTCCCACCCCTCCCCGAGAGTGCTGTGTG----TGAGGATGGGGGCTCCTT-----------CACTCAGGAAGCCGTC-CTGTCAT-CCCAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1108367 124 + 1231380 GCCCTGGGTCCCCAGCTGGGATG----------------AGGCTCTGGAGCCCCTGTGGTCGGCTCCCACCCCTCGCCGAGAGTGCTGGGTG----TGAGGATGGGGGCTCCTT-----------CACTCAGGAAGCCGTC-CTGTCAT-CCCAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2638499 122 + 11732439 GCCCTGGGTCCCCAGCTGGGATG----------------AGGCTCTGGAGCCCCCGTGGTCGGCTCCCACCCCTCCCT--GAGTGCTGCATG----TGAGGATGGGAGCTCTTT-----------CACTCAGGAAGCCGCC-CTGTCAT-CCCAGAG i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47570781 138 + 47698779 GCTCTGGGGCCCCATTTGGGGTGGG--------------AGGCCCTGGTGCCCTC-----TGGCCTCCGCCCAGGCCTGGGGGTGAGACTGGACACTGACAGTTTTGCCTCTTTGCTCCTTCACCCACCCAGGAAGCTGTTGCTGTCACGTCCAGAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 206331 1198 - 397369 I e otoGar3.GL873542 22801973 72 + 22939663 I a score=245794.000000 s hg38.chr20_KI270870v1_alt 63574 22 + 183433 TGTGGTGTTGGCCTCGAACTGG s panTro5.chr20 66388363 22 + 66533130 TGTGGTGTTGGCCTCGAACTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62068931 22 + 62195757 TGTGGTGTTGGCCTCGAACTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454024 22 - 578057 TGTGGTGTTGGCCTTGAACTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981312 22 - 110113093 TGTGGTGTTGGCCTCAAACTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92709564 22 - 92844088 TGTGGTGTTGGCCTCAGACTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377072 22 + 96509753 TGTGGTGTTGGCCTCAGACTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847388 22 - 16982598 TGTGGTGTTGGCCTCAGACTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649395 22 - 3785965 TGTGGTGTTGGCCTCAGACTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270789 22 - 90373283 TGTGGTGTTGACCTCAGACTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34336 22 - 179258 TGTGGCGTTGGCCTCAGACTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521112 22 - 5823884 TGTGGTGTTGGCCTCACACTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1258 22 + 372756 TGTGGTGCTGGCCTCACACTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241729 22 + 16356641 TGTGGTGCTGGCCTCACACTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1108491 22 + 1231380 TGTGGTGCTGGCCTCACACTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2638621 22 + 11732439 TGTGGTGCTGGCCTCACACTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22802045 22 + 22939663 TGTGGCTTTGGCCTTGTGCTGG i otoGar3.GL873542 I 72 C 0 s canFam3.chr24 47570919 14 + 47698779 GGTGGTGTTGGCCC-------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I e dasNov3.JH569290 206331 1198 - 397369 I a score=2289375.000000 s hg38.chr20_KI270870v1_alt 63596 230 + 183433 CTCTTGATCTCCCATGTGGGGCATGGCTGGAACCATCCCAGGGTCAGTGTGTCTCAGGCTCCAGCTTGGGCATCTTGGGACAGAGACTG---GAGGGGTGTTTCTCCCAACATGGCCAGGCCAGCGTGGCTG-TCATCCTTGGACATCAGTCAGCAGCTGGCCAGTGCCTACCGGTTCCACCAAGCTCCATTCTTGGGAATGCAGGGCCCGGACATTCAGTCCAGAGACTTTCC- s panTro5.chr20 66388385 230 + 66533130 CTCTTGATCTCCAATGTGGGGCATGGCTGGAACCATCCCAGGGTCAGTGTGTCTCAGGCTCCAGCTTGGGCATCTTGGGACAGAGACTG---GAGGGGTGTTTCTCCCAACATGGCCAGGCCAGCGTGGCTG-TCATCCTTGGACATCAGTCAGCAGCTGGCCAGTGCCTACCCGTTCCACCAAGCTCCATTCTTGGGAATGCAGGGCCCGGACATTCAGTCCAGAGACTTTCC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62068953 230 + 62195757 CTCTTGATCTCCAATGTGGGGCATGGCTGGAACCATCCCAGGGTCAGTGTGTCTCAGGCTCCAGCTTGGGCATCTTGGGACAGAGACTG---GAGGGGTGTTTCTCCCAACATGGCCAGGCCAGCGTGGCTG-TCATCCTTGGACATCAGTCAGCAGCTGGCCAGTGCCTACCCGTTCCACCAAGCTCCATTCTTGGGAATGCAGGGCCCGGACATTCAGTCCAGAGACTTTCC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454046 229 - 578057 CTCTTGATCTCCAATGTGGGGCATGGCTGGAACCAT-CCAGGGTCAGTGTGTCTCAGGCTCCAGCTTGGGCATCTTGGGACAGAGACCG---GAGGGGTGTTTCTCCCAACATGGCCAGGCCAGCGTGGCTG-TCGTCCTTGGACATCAGTCAGCGGCTGGCCAGTGCCTACCCGTTCCACCAAGCTCCATTCTTGGGAATGCAGGGCCCGGACATTCAGTCCAGAGACTTTCC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981334 230 - 110113093 CTCTTGATCTCCAATGTGGGGCATGGCTGGAACCATCCCAGGGTCAGTGTGTCTCAGGCTCCAGCTTGGGCATCTTGGGACAGAGACTG---GAGGGGTGTTTCTCCCGACATGGCCAGGCCAGCGTGGCTG-TCGTCCTTGGACATCAGTCAGCAGCTGGCCAGTGCCTACCCGTTCCACCAAGCTCCATTCTTGGGAATGCAGGGCCCGGACATTCAGTCCAGAGTCTTTCC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92709586 233 - 92844088 CTCTTGATCTCCAACGTGGGGCATGGCTGGAACCATCCAGTGGTCAGTGTGTCTCGGGCTCCAGCTTAGGCATCTTGGGACAGAGACTGGGCGGCGGGTGTTTCTCCGGACATGGCCAGGCCAGCATGGCTG-TTGTCCTTGGACATCAGTCAGCAATAGGCCAGTGCCTACCTGTTCCGCCAAGCTCCATTCTTGGGAATGCAGGGCCCAGACATTCAGTCCAGGGTCTTTCC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377094 233 + 96509753 CTCTTGATCTCCAACGTGGGGCATGGCTGGAACCATCCAGTGGTCAGTGTGTCTCGGGCTCCAGCTTAGGCATCTTGGGACAGAGACTGGGCGGCGGGTGTTTCTCCGGACATGGCCAGGCCAGCATGGCTG-TTGTCCTTGGACATCAGTCAGCAATAGGCCAGTGCCTACCTGTTCCGCCAAGCTCCATTCTTGGGAATGCAGGGCCCAGACATTCAGTCCAGGGTCTTTCC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847410 233 - 16982598 CTCTTGATCTCCAACGTGGGGCATGGCTGGAACCATCCAGTGGTCAGTGTGTCTCGGGCTCCAGCTTAGGCATCTTGGGACAGAGACTGGGCGGCGGGTGTTTCTCCGGACATGGCCAGGCCAGCATGGCTG-TTGTCCTTGGACATCAGTCAGCAATAGGCCAGTGCCTACCTGTTCCGCCAAGCTCCATTCTTGGGAATGCAGGGCCCAGACATTCAGTCCAGGGTCTTTCC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649417 233 - 3785965 TTCTTGATCTCCAATGTGGGGCATGGCTGGAACCATCCAGCGGTCAGTGTGTCTCGGGCTCCAGCTTAGGCATCTTGGGACAGAGACTGGGCGGCGGGTGTTTCTCCGGACATGGCCAGGCCAGCATGGCTG-TTGTCCTTGGACATCAGTCAGCAATAGGCCAGTGCCTACCTGTTCCGCCAAGCTCCATTCTTGGGAATGCAGGGCCCGGACATTCAGTCCAGGGTCTTTCC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90270811 227 - 90373283 C------TCTCCAATGTGGGGCATGGCTGGAACCATCCAGCGGTCAGTGTGTCTTGGGCTCCAGCTTAGGCATCTTGGGACAGAGACTGGGCGGCGGGTGTTTCTCTGGACATGGCCAGGCCAGCATGGCTG-TTGTCCTTGGACATCAGTCAGCAATAGGCCAGTGCCTACCTGTTCCGCCAAGCTCCATTCTTGGGAATGCAGGGCCTGGACATTCAGTCCAGGGTCTTTCC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34358 233 - 179258 CTCTTGATCTCCAATGTGGGGCATGGCTGGAACTATCCAGCGGTCAGTGTGTCTCGGGCTCCAGCTTAGGCATCTTGGGACAGAGACTGGGCGGCGGGTGTTTCTCCGGACATGGCCAGGCCAGCATGGCTG-TTGTCCTTGGACATCAGTCAGCAATAGGCCAGTGCCTACCTGTTCCGCCAAGCTCCATTCTTGGGAATGCAGGGCCCGGACATTCAGTCCAGGGTCTTTCC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521134 231 - 5823884 CTCTTGATCTCCAATGTGGGGCATGGCTGGAACCACCCCGCGATCAGTGTGTCTCGGGCTCCAGGTTAGGCATCTTGGGACAGAGACTGGGCGGGGGGTGTTTCTCCGGACATGGCTAGGCCAGCATGGCTG-TCGTCCTTGGACAT--GTCAGCAACTGGCCAGTGCCTACCTCTTCCACCAAGCTCCATTCTTGGGAATGCAGGGCCCGGACATTCAGTCCAGGGTCTTTCC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1280 226 + 372756 CTCTTGATCCCCAATGTGGGGCATGGCTGGAACCACCCCAGAGTCAGTGTGTCTCAGCCTCCAGCTTGAGCATCTTGGAACAGAGACTT---GGTGGGTGTTTCTCCTGACATGGCTAGGCCAGCGTGGCTG----TCCTAGGACATCAGTCAAC-TCTGGACAGTGCCTACCTGTTCCACCAAGCTCCATTCTTGGGAATGCAGGGCCTGGACATTCAGTCCAGGGTCTTTCC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241751 225 + 16356641 CTCTTGATCCCCAATG-GGGGCATGGATGGAACCACCCCAGAGTCAGTGTGTCTCAGGTTCCAGCTTGGGCATCTTGGGACAGAGACTT---GGTGGGTGTTTATCCTGGCGTGGCTAGGCCAGCGTGGCTG----TCCTCAGGCATCAGTCAGC-TCTGGACCGTGCCTACCCGTTCCACCAAACTCCATTCTTGGGAATGCAGGGCCTGGACATTCAGTCCAGGGTCTTTCT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1108513 190 + 1231380 CTCTTGATCCCCAATG-TGGGCATGGCTGGAACCACCCCAGAGCCAGTGTGTCTCAGGCTCCAGCTTGGGCATCTTGGGACAGAG-CTT---GGTGGGTGTTTCTCCTGACGTGGCTAGGCCAGCGTGGCTG----TCCTCGGACATCAGTCAGC-TCTGGACAGTGCCTACCCGTTC----------------------------------ACTTTTAGTCCAGGGTCTTTCC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2638643 226 + 11732439 CCCTTGATCCCCAATGTGGGGCATGGCTGGAACCACCCCAGAGTCAGTGTGTCTCAGGCTCCAGCTTGGGCATCTTGGAACGGAGACTT---GGTGGCTGTTTCTCCTGACGTGGCTAGGCCAGCGTGGCTG----TCCTCGGATATCAGTCAGC-TCTGGACAGTGCCTTCCCATTCCACCAAGCTCCATTCTTGGGAATGCGGGGCCTGGACATTCAGTCCAGGGTTTTTCC- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22802067 221 + 22939663 CTCTTGTTCTTCAATGCTGGGCATGTCTGGGACCACCCCAGGGTCAGTGTGTCTTGG----CAGCTTGGGCATCTTGGGACAGAGACTTG--GGGGAATGTTTCTCTCACTGTGCCCGGGCTGGCATCGCCGTTTATTCTCCACC--CAGTGTGAAGCAAGCCAGTGCCCACCCACTCC----AGGTTCCTTTTGAAGGCTGCAGAGCCTG-ATGTCCAGGTGAGGGTTTTTCC- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47570933 184 + 47698779 ----TTAGCCTCAGTGTCGCCC---------CCCCGCCCCGGGTCAGCCTGGCCTGGGCTCTAGCTTGGGCCTCTCAGGACGGGGTCTTGG-AGGGGGTGCTTCTCCCGAGG------GGCCAG----GCTG-CTGTTCTCAACCCCCAGCCTGTGGCCAGCCAGGACCCACTGGCTC---AAAAACCCGTCCCTG---CTGCA-------------------AAGGTGTTTCC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 207529 166 - 397369 CTCTTGTTCCCAGCACTGGGCTGTGGCTGGCATCA-CCGAGGGCCAGTGTATC-CAGGTGCCAGCTTGGGCATCTTGAGACAGGGTCTT-------------------GACCTGCCCAGGCT------GCCC-TAGTCCCTGGACCT--------------------CCAGCCCTGTCCTCTGAGGTCCACTCCTG---------------------CAGTCTTGGGGTGTTTGT i dasNov3.JH569290 I 1198 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e mm10.chr2 181756896 2195 + 182113224 I e micMur3.chr18 56817775 5634 + 57149010 I a score=318617.000000 s hg38.chr20_KI270870v1_alt 63826 24 + 183433 CTCCCGGGGCTCTGCTGGGGGTGC---------------- s panTro5.chr20 66388615 24 + 66533130 CTCCCGGGGCTCTGCTGGGGGTGC---------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069183 24 + 62195757 CTCCCGGGGCTCTGCTGGGGGTGC---------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454275 24 - 578057 CTCCCGGGGCTCTGCTGGGGGTGC---------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981564 24 - 110113093 CTCCCGGGGCTCTGCTGGGGGTGC---------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92709819 24 - 92844088 CTCCTGGGGCTCTGCTGGGGGTGC---------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377327 24 + 96509753 CTCCTGGGGCTCTGCTGGGGGTGC---------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847643 24 - 16982598 CTCCTGGGGCTCTGCTGGGGGTGC---------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649650 24 - 3785965 CTCCTGGGGCTCTGCTGGGGGTGC---------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271038 24 - 90373283 CTCCCGGGGCTCTGCTGGGGGTGC---------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34591 24 - 179258 CTCCTGGGGCTCTGCTGGGGGTGC---------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521365 24 - 5823884 CTCCTGGGGCTCTGCTGGGGGTGC---------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1506 24 + 372756 CTCCTGGGGCTCTGCTGGGGGTGC---------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16241976 24 + 16356641 GTCCTGGGGCTCTGCTGGGGGTGC---------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1108703 24 + 1231380 CTCCTGGGGCTCTGTTGGGGGTGC---------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2638869 24 + 11732439 CTCCTGGGGCTCTGCTGGGGGTGC---------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22802288 23 + 22939663 CTCC-ATGGCTGTACTGGAGGTGC---------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181759091 24 + 182113224 CTTCAGGGGTTGTTCAGGTACTTC---------------- i mm10.chr2 I 2195 C 0 s canFam3.chr24 47571117 23 + 47698779 CTCCTGGGACTCTGCTGG-GGCGC---------------- i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 207695 40 - 397369 CTCTTGGGGCACCACTGGGGACCCTGGGCCACCTGGCATC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1814399 6223 - 2029793 I e micMur3.chr18 56817775 5634 + 57149010 I a score=436687.000000 s hg38.chr20_KI270870v1_alt 63850 40 + 183433 CCCTCCCCATGAGCCCA----TCTTGACATTTGTGAGCCCTG--CT s panTro5.chr20 66388639 40 + 66533130 CCCTCCCCATGAGCCCA----TCTTGACATTTGTGAGCCCTG--CT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069207 40 + 62195757 CCCTCCCCATGAGCCCA----TCTTGACATTTGTGAGCCCTG--CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454299 39 - 578057 CCCT-CCCATGAGCCCA----TCTTGACATTTGTGAGCCCTG--CT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981588 40 - 110113093 CCCTCCCCACGAGCCCA----TCTTGACATTTGTGAGCGCTG--CT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92709843 42 - 92844088 CCCTCCCCATGAGCCCA----TCTTGACATTTGTGGGCCTTGCTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377351 42 + 96509753 CCCTCCCCATGAGCCCA----TCTTGACATTTGTGGGCCTTGCTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847667 42 - 16982598 CCCTCCCCATGAGCCCA----TCTTGACATTTGTGGGCCTTGCTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649674 42 - 3785965 CCCTCCCCATGAGCCCA----TCTTGACATTTGTGGGCCTTGCTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271062 42 - 90373283 CCCTCCCTATGAGCCCA----TCTTGACATTTGTGGGCCTTGCTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34615 42 - 179258 CCCTCCCCATGAGCCCA----TCTTGACATTTGTGGGCCTTGCTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521389 42 - 5823884 CCCTCCCCATGAGCCCA----TCTTGACATTTGTGGGTCTTGCTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1530 41 + 372756 CCC-CACCATGAGCCCA----TCTTGAAATTTGTGGGCCTTGCTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16242000 42 + 16356641 CCCTCCCCATGAGCCCA----TCTTGAAATTTGTGGGCCTTGCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1108727 42 + 1231380 CCCTCCCCATGAGCCCA----TCTTGAAATTTGTGGGCCTTGCTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2638893 42 + 11732439 CCCTCCCCATGAGCCCA----TCTTGAAATTTGTGGGCCTTGCTCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1820622 40 - 2029793 CCCTCCCCACGCGCCCG----TCTTGACATTTGCGGGCCTCGCT-- i proCoq1.NW_012150197v1 I 6223 C 0 s otoGar3.GL873542 22802311 20 + 22939663 CCCTCCC------------------------TGTGGGCCTCACT-- i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181759115 44 + 182113224 CCTGCTCCATGCATTCATTTGTCTTGACTTCTATTGGATTCGCT-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47571142 33 + 47698779 CCCTCCCCAGGAAGGGA----CAT-------GGCGGGCTGTGCT-- i canFam3.chr24 I 2 I 3 s dasNov3.JH569290 207735 36 - 397369 CCCTCTCCACGA----A----CCCTGACGTATGTGGGCCGTGCT-- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56817775 5634 + 57149010 I a score=2958394.000000 s hg38.chr20_KI270870v1_alt 63890 182 + 183433 CTGTCTGCTAATGAGCGATCTTCACCAGTCCAGCCTGCCATGGCAACCGCCCGCAGCCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG s panTro5.chr20 66388679 182 + 66533130 CTGTCTGCTAATGAGCGATCTTCACCAGTCCAGCCTGCCATGGCAACCGCCCGCAGCCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069247 182 + 62195757 CTGTCTGCTAATGAGCGATCTTCACCAGCCCAGCCTGCCATGGCAACCGCCCGCAGCCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454338 181 - 578057 CTGTCTGCTAATGAGCGATCTTCACCAGTCCAGCCTGCCATGGCAACCG-CCGCAGCCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCTGAGGCCATCTGTTCTGGGAGCACAGTTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981628 182 - 110113093 CTGTCTGCTAATGAGCGATCTTCGCCAGTCCAGCCTGCCATGGTAACCGCCCGCAGCCTCACTCTCTGTCCAGGCACCCAGTAGCTTTATCTCTGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92709885 182 - 92844088 CTGTCTGCTAATGAGTGATCTTCACCAGTCCAGCCTGCCATGGCAACCGCCCGCAGTCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377393 182 + 96509753 CTGTCTGCTAATGAGTGATCTTCACCAGTCCAGCCTGCCATGGCAACCGCCCGCAGTCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847709 182 - 16982598 CTGTCTGCTAATGAGTGATCTTCACCAGTCCAGCCTGCCATGGCAACCGCCCGCAGTCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCAAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649716 182 - 3785965 CTGTCTGCTAATGAGTGATCTTCACCAGTCCAGCCTGCCATGGCAACCGCCCGCAGTCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271104 182 - 90373283 CTGTCTGCTAATGAGTGATCTTCACCAGTCCAGCCTGCCATGGCAACCGCCCGCAGTCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34657 182 - 179258 CTGTCTGCTAATGAGTGATCTTCACCAGTCCAGCCTGCCATGGCAACCGCCTGCAGTCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521431 182 - 5823884 CTGTCTGCTAATGAGTGATCTTCACCAGTCCAGCCTGCCATGGCAACCGCGCACAGTCTCGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCTGGGCCCTCTGTCCTCACACG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1571 181 + 372756 CTGTCTGCTAATGAGTGATCTCTGCCAGTCCAGCCTGCCATGGCAACCGCCTACAGCCTCACTCTCTGTCCAGGCACCCAGTAGCTTTATCTCC-AGGCCATCTGTTCTGGGAGCACAATTCCAAAGCTATTTAAACAGAGCCTGGAGCAGGGCAAGGGGCTGGGGCCTCTGTCcacacacg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16242042 181 + 16356641 CTGTCTGCTAATGAGCGATCTCTGCCAGTCCAGCCTGCCATGGCAACCGCCTACAGCCTTGCTCTCTGTCCAGGCACCCGGTAGCTTTATCTCC-AGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCCGGTGCCTCTGTCCGCACATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1108769 181 + 1231380 CTGTCTGCTAATGAGCGATCTCTGCCAGTCCAGCCTGCCATGGCAACCGCCTACAGCCTCACTCTCTGTCCAGGCACCCGGTAGCTTCATCTCC-AGGCCATCTGTTCTGGGAGCACAGTTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCCGGGGCCTCTGTCTGCACACG i cebCap1.NW_016107870v1 C 0 I 868 s aotNan1.NW_018500483v1 2638935 181 + 11732439 CTGTCTGCTAATGAGCGATCTCTGCCAGTCCAGCCTGCCATGGCAACCGCCTACAGCCTCGCTCTCTGTCCAGGCACCCAGTAGCTTTATCTCC-AGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGGGCAAGGCGCCGGGGCCTCTGTCCGCACAAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56823409 179 + 57149010 CTGTCCACTAATGAGCGGGCTCCTCCAGCCCAGCCTGCCATGGCAACCGCCCGCGGC--CGCCCTCCGTCCAGGCGCCTGGCGGCTTTATCT-CGCGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCGGTGGGGGGCGCCGAGCCCTCCGTCCTCACACG i micMur3.chr18 I 5634 C 0 s proCoq1.NW_012150197v1 1820662 180 - 2029793 CCGTCCACCGATGAGCGGACTCCTCCAGCTCAGCCTGCCATGGCAACCGCCCGCGGT--CGCTCTCCGTCCAGGCGCCTGGTGGCTTTATCTCCGAGGCCATCTGTTCTGGGAGCACAATTCCAAAGCCATTTAAACAGAGCCTGGAGCAGTGCAAGGCGCTAAGCCCTCCGTCCTCACACG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22802333 168 + 22939663 CTATCCACTAATAAGCAGACTCCTCCAGGTCTGTCTGCCATGGCAAC------------TGCTCCCCGTCCACAAGCCTGGTGGTTTTATCTCCAAGGCCATCTGTTCCAAGAGTGCAATTTCAAGGCCATTTAA--AGAGCCTGGAGCAGGGTAAGACACTAAACCCTACATCCTCACACG i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181759159 168 + 182113224 --CTTTGCTAACAAGCAGACTTAGCCAGCCCAGCTTGCCATGGCAACCGCCCACAGC-TTGCTCTCTGTCCGGCTGCCTGGCTGCTTTATCTCTGAGGCCATCTGTTCTGGCAACACAATTCCAAAGCCACTTAAACAGAGCCTGGAGCAGGGCA-----------TCCCTAAGCTCACATG i mm10.chr2 C 0 C 0 s canFam3.chr24 47571178 178 + 47698779 GTGGCCACTAATGAGCAGACGCCACGA-CCCAGCCTGCCATGGCAAC-GCCCGCGGC-TCCCTCTCCA-CCGGGCTCTGGGCAGCTTGATCTCTGAGGCCATCTGTTCTGAGAGCAGAATTCCAGAGCCATTTAAACAGAGCCCGGGGCAGGGCAAGGAGCCGAGCCCTCTACCCTCCCACG i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 207771 131 - 397369 CTGGCCTCTAGCAAG---ACCCTGCCAGCCGGACCTGCCCTGGCAGCCTCCTGTGGT-----------------CACCTGGCAGTGCTATCTGTGAGGCCATCTG--CTGGGAGACCAGTT-CAGAGCC----AAATAGAGCCTGGGGTGGTGCAACG------------------------ i dasNov3.JH569290 C 0 C 0 a score=28586.000000 s hg38.chr20_KI270870v1_alt 64072 2 + 183433 TG s panTro5.chr20 66388861 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069429 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454519 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981810 2 - 110113093 TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710067 2 - 92844088 TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377575 2 + 96509753 TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847891 2 - 16982598 TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649898 2 - 3785965 TG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271286 2 - 90373283 TG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34839 2 - 179258 TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521613 2 - 5823884 TG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16242223 2 + 16356641 TG i saiBol1.JH378156 C 0 I 681 s aotNan1.NW_018500483v1 2639116 2 + 11732439 TG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56823588 2 + 57149010 TG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1820842 2 - 2029793 TG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22802501 2 + 22939663 AG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181759327 2 + 182113224 AG i mm10.chr2 C 0 C 0 s canFam3.chr24 47571356 2 + 47698779 TG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 207902 2 - 397369 TG i dasNov3.JH569290 C 0 C 0 e cebCap1.NW_016107870v1 1108950 868 + 1231380 I e calJac3.chrUn_GL286459 1752 0 + 372756 C a score=9090.000000 s hg38.chr20_KI270870v1_alt 64074 1 + 183433 T s panTro5.chr20 66388863 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069431 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454521 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981812 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710069 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377577 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847893 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649900 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271288 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34841 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521615 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16242906 1 + 16356641 c i saiBol1.JH378156 I 681 C 0 s aotNan1.NW_018500483v1 2639118 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 I 704 s mm10.chr2 181759329 1 + 182113224 T i mm10.chr2 C 0 C 0 s dasNov3.JH569290 207904 1 - 397369 T i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1820844 0 - 2029793 C e canFam3.chr24 47571358 0 + 47698779 C e micMur3.chr18 56823590 0 + 57149010 C e cebCap1.NW_016107870v1 1108950 868 + 1231380 I e calJac3.chrUn_GL286459 1752 0 + 372756 C e otoGar3.GL873542 22802503 0 + 22939663 C a score=140744.000000 s hg38.chr20_KI270870v1_alt 64075 16 + 183433 CTGTGcacacactcag s panTro5.chr20 66388864 16 + 66533130 GTGTGcacacactcag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069432 16 + 62195757 GTGTGcacacactcag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454522 12 - 578057 GTGTGCACA----CAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981813 16 - 110113093 GTGtgcacacactcag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710070 16 - 92844088 GTGTACACACACTCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377578 16 + 96509753 GTGTACACACACTCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847894 16 - 16982598 GTGTACACACACTCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649901 16 - 3785965 GTGTAcacacactcag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271289 16 - 90373283 GTGTacacacactcag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34842 16 - 179258 GTGTAcacacactcag i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521616 16 - 5823884 GTGTACACACACTCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1752 15 + 372756 -tgtgtgcatgctcat i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16242907 16 + 16356641 atgcacacacgctcat i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56823590 15 + 57149010 -TGTGCACACGCTCAC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1820844 15 - 2029793 -TGTGCACACGCTCAC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22802503 15 + 22939663 -TGTGTATATGCTCAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181759330 2 + 182113224 --GT------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47571358 15 + 47698779 -TGTGCACACGCTCGA i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 207905 0 - 397369 C e cebCap1.NW_016107870v1 1108950 868 + 1231380 I e aotNan1.NW_018500483v1 2639119 704 + 11732439 I a score=16511.000000 s hg38.chr20_KI270870v1_alt 64091 1 + 183433 g s panTro5.chr20 66388880 1 + 66533130 g i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069448 1 + 62195757 g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454534 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981829 1 - 110113093 g i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710086 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377594 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847910 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649917 1 - 3785965 g i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271305 1 - 90373283 g i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34858 1 - 179258 g i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521632 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1767 1 + 372756 g i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16242923 1 + 16356641 g i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1109818 1 + 1231380 g i cebCap1.NW_016107870v1 I 868 C 0 s micMur3.chr18 56823605 1 + 57149010 G i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1820859 1 - 2029793 G i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22802518 1 + 22939663 A i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181759332 1 + 182113224 G i mm10.chr2 C 0 C 0 s canFam3.chr24 47571373 1 + 47698779 G i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 207905 0 - 397369 C e aotNan1.NW_018500483v1 2639119 704 + 11732439 I a score=107271.000000 s hg38.chr20_KI270870v1_alt 64092 7 + 183433 cacacac s panTro5.chr20 66388881 7 + 66533130 cacacac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069449 7 + 62195757 cacacac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454535 7 - 578057 CATACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981830 7 - 110113093 cacacac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710087 7 - 92844088 CACACAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377595 7 + 96509753 CACACAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847911 7 - 16982598 CACACAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649918 7 - 3785965 cacacac i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271306 7 - 90373283 cacacac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34859 7 - 179258 cacacac i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521633 7 - 5823884 CACACAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1768 7 + 372756 cacacac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16242924 7 + 16356641 cacacac i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1109819 7 + 1231380 cacacac i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2639823 7 + 11732439 CACACAC i aotNan1.NW_018500483v1 I 704 C 0 s micMur3.chr18 56823606 7 + 57149010 CGCACAC i micMur3.chr18 C 0 I 1591 s proCoq1.NW_012150197v1 1820860 7 - 2029793 CGCACAC i proCoq1.NW_012150197v1 C 0 I 113 s otoGar3.GL873542 22802519 6 + 22939663 TGCATG- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181759333 7 + 182113224 CACGCAC i mm10.chr2 C 0 I 1 s canFam3.chr24 47571374 7 + 47698779 Aacacac i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 207905 0 - 397369 C a score=12610.000000 s hg38.chr20_KI270870v1_alt 64099 2 + 183433 ac s panTro5.chr20 66388888 2 + 66533130 ac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069456 2 + 62195757 ac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454542 2 - 578057 AT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981837 2 - 110113093 ac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710094 2 - 92844088 AC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377602 2 + 96509753 AC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847918 2 - 16982598 AC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649925 2 - 3785965 ac i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271313 2 - 90373283 ac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34866 2 - 179258 ac i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521640 2 - 5823884 AC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 1775 2 + 372756 ac i calJac3.chrUn_GL286459 C 0 I 671 s saiBol1.JH378156 16242931 2 + 16356641 at i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1109826 2 + 1231380 at i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2639830 2 + 11732439 AC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181759341 1 + 182113224 A- i mm10.chr2 I 1 C 0 s canFam3.chr24 47571381 2 + 47698779 gc i canFam3.chr24 C 0 I 25 e proCoq1.NW_012150197v1 1820867 113 - 2029793 I e micMur3.chr18 56823613 1591 + 57149010 I e dasNov3.JH569290 207905 0 - 397369 C e otoGar3.GL873542 22802525 0 + 22939663 C a score=1678173.000000 s hg38.chr20_KI270870v1_alt 64101 189 + 183433 gcacatgcacaTGCTGATGTGGTGTGACCCCTGCAGGGTGGAAGG-TGATGACAGGG-ACAGTCAGTGTGCCCCACCGGCTGCTCCCTTTTCCTGCTGTCACCGAGCCGGTTCCTGGGCACCCTGGTGGTCGGCCAGTCTGTGTCCTCCTCTCTTTCTCTGTGTTCCTCACCTCTCTGTCCATCTGTGTGT s panTro5.chr20 66388890 189 + 66533130 gcacatgcacaTGCTGATGTGGTGTGACCCCTGCAGGGTGGAAGG-CGATGACAGGG-ACAGTCAGGGTGCCCCACTGGCTGCTCCCTTTTCCTGCTGTCGCCGAGCCGGTTCCTGGGCACCCTGGTGGTTGGCCAGTCTGTGTCCTCCTCTCTTTCTCTGTGTTCCTCACCTCTCTGTCCATCTGTTTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069458 189 + 62195757 gcacatgcacaTGCTGATGTGGTGTGACCCCTGCAGGGTGGAAGG-CGATGACAGGG-ACAGTCAGGGTGCCCCACTGGCTGCTCCCTTTTCCTGCTGTCGCCGAGCCGGTTCCTGGGCACCCTGGTGGTTGGCCAGTCTGTGTCCTCCTCTCTTTCTCTGTGTTCCTCACCTCTCTGTCCATCTGTTTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454544 189 - 578057 GCACGTGCACATGCAGATGTGGTGTGACCCCTGCAGGGTGGAATG-CGATGACAGGG-ACAGTCAGGGTGCCCCACCGGCTGCTCCCTTTTCCTGCTGTCACCGAGCCGGTTCCTGGGCACCCTGGTGGTCGGCCAGTCTGTGTCCTCCTCTCTTTCTCTGTGTTCCTCACCTCTCTGTCCATCTGTTTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109981839 189 - 110113093 gcacatgcacatgcagatgTGGTGTGACCCCTGCAGGGTGGAAGG-CAATGACAGGG-ACAGTCAGGGTGCCCCTCCGGCTGCTCCCTTTCACTGCTGTCCCCGAGCCGGTTCCTGGGCACCCTGGTGGTCGGCCAGTCTGTGTCCTCCTCTCTTTCTCTGTGTTCCTCACCTCTCTGTCCATCTGTTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710096 181 - 92844088 GCATGTGCACATGCAGATGTGGTGTGACCCCTGCAAGGTGGAAGG-CGATGACAGGG-ACAGTCAGGGCGTCCCACCGGCTGCTCCCTTTCCCTACTGTCCCCAAGCTGGTTCCTGGGCACCCTGGTGGTCGGCCAGTCTGTGTCTTCCTCTCTTTCTCTGTATTCCTCACCTC--------TCTGTTTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377604 181 + 96509753 GCATGTGCACATGCAGGTGTGGTGTGACCCCTGCAAGGTGGAAGG-CGATGACAGGG-ACAGTCAGGGCGTCCCACCGGCTGCTCCCTTTTCCTACTGTCCCCAAGCTGGTTCCTGGGCACCCTGGTGGTCGGCCAGTCTGTGTCTTCCTCTCTTTCTCTGTATTCCTCACCTC--------TCTGTTTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16847920 189 - 16982598 GCATGTGCACATGCAGATGTGGTGTGACCCCTGCAAGGTGGAAGG-CGATGACAGGG-ACAGTCAGGGCGTCCCACCAGCTGCTCCCTTTTCCTACTGTCCCCAAGCTGGTTCCTGGGCACCCTGGTGGTCGGCCAGTCTGTGTCTTCCTCTCTTTCTCTATATTCCTCACCTCTCTGTCCATCTGTTTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3649927 189 - 3785965 gcacgtgcacatgcagatgTGGTGTGACCCCTGCAAGGTGGAAGG-CGATGACAGGG-ACAGTCAGGGCGTCCCACCGGCTGCTCCCTTTTCCTACTGTCCCCAAGCTGGTTCCTGGGCACCCTGGTGGTCGGCCAGTCTGTGTCTTCCTCTCTTTCTCTGTATTCTTCACCTCTCTGTCCACCTGTTTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271315 185 - 90373283 gcac--gcacaTGCAGATGTGGTGTGACCCCTGCAAGGTGGAAGG-TGATGACAGGG-ACAGTCAGGGCATCCCACCAGCTGCTCCCTTTTCCTACTGTCCCCAAGCCGGTTCCTGGGCACCCTGGTGGTCGGCCAGTC--TGTCTTCCTCTCTTTCTCTATATTCCTCACCTCTCTGTCCATCTGTTTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 34868 189 - 179258 gcacgtgcacatgcagatgTGGTGTGACCCCTGCAAGGTGGAAGG-CGATGACAGGG-ACAGTCAGGGCGTCCCACCGGCTGCTCCCTTTTCCTACTGTCCCCAAGCTGGTTCCTGGGCACCCTGGTGGTCGGCCAGTCTGTGTCTTCCTCTCTTTCTCTATATTCCTCACCTCTCTGTCCATCTGTTTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521642 183 - 5823884 ------GGACATGCAGATGTGGTGTGACCCCTGCAAGGTGGAAGG-CGATGACAGGG-ACAGTCAGGGCATCCCACTGGCTTCTCCCTTTTCCTACTGTCCCCAAGCCGGTTCCTGGGCACCCTGGTGGTCGGCCAGTCTGTGTCCTCCTCTCTTTCTCTGTATTCCTCACCTCTCTGTCCATCTGTTTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 2448 167 + 372756 GCACATGCACACGCAGATGTGGGGTGACTCCTGCAGGGTGGAAGG-TGATGAT-GGG-GCAGTCAGAGTACCCCACCAGCTG-TCCCTTTTCCTGTTGTCCCCGAGCTGGGTCCTGGGTACCCGAACAGTTAGCCAGtctgtctc-----ctctctct---------------ttctgtccatctgcttgt i calJac3.chrUn_GL286459 I 671 C 0 s saiBol1.JH378156 16242933 181 + 16356641 gcatatgcacacgcaGTTGTAGGGTGACCCCTGCAGGGTGGAAGG-TGATGAT-GGG-GCAGTCAGGGTGCCCCACCAGCTGCTCCCTTTTCCTGCTGTCCCTGAGCTGGGTCCTGGGTGCCCTGGTGGTCAGCCAGTCTGTCTC-----CGCTCTTTCTCTGTTGCTCAC--CTCTGTCCATCCACTTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1109828 183 + 1231380 gcacatgcacacgcaGATGTGGGGTGACCCCTGCAGGGTGGAAGG-TGATCAT-GGG-GCAGTCAGGGTGCCTCACCAACTGCTCCCTTTTCCTGCTGTCCCCGAGCGGGGTCCTGGGTGCCCTGGTGGTCAGCCAGTCTGTGTC-----CTCTCTCTCTGTGTTGCTCACCTCTCTGTCCATCCGCCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2639832 182 + 11732439 GCACATGCACACTCAGATGTGGGGTGACCCCCGCAGGGTGGAAGG-TGGTAAT-GGG-GCAGTCAGGGTGCTCTACCGGCTGCTCCCTTTTCCTGCTGTCCCCGAGCTGGGTCCTGGGTGCCCCGGTGGTCAGCCAGTCTGCCTC-----CTCTCTCTCTCCGTTGCTCACCTCTCTGTCTGTC-GCTTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22802525 150 + 22939663 --------GCATGCAGATGCTGTTGGACCCCTGCAAGGTGGAAGG-CGTCGTCAGGG-ACAGGCTGG-------ATCTTCTGCTCACTTTTCCTGCTGTCTCTGAGCCAG-TCTTGGAAGACTTGGTGGTCGTTCTATC---------CTCTCTGCAGCTG----------CTCTCTGTCTATCTGT---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181759342 136 + 182113224 GCACATGCACAT--AGAAGCAGCATGACCCCTGCAGGGTGGAAGG-TAATGTCAG---------TGGGGATCCCAGCAGCTGCTCACTTTTCTTGCTGTTCTTGAGAGATTTCTGACAAGTCCTTACGAACGG-------------------------------------------TGTACGTCTACATAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47571408 144 + 47698779 acgcacgcacAGGCAGATGGGGCATGGCCCCC-CAGGGCGCACGGACGCTGAGAGGACAAACTCGGGGGGCC-------CTGCGCCCACTTCCTCCGGAGCCCGGGTGG---CCTGTCTCCTTCGGAGCCCCTCCAGCC-----CCTTTCCTCTACCGCT------------------------------- i canFam3.chr24 I 25 C 0 s dasNov3.JH569290 207905 53 - 397369 ---------------------GGGCGACT-------GGCAGAGGG-AAAAACCCGGG-A---------------------------------------------------------AGAGGCCTGGAGGCCTGCCCGTCT--------------------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1820867 113 - 2029793 I e micMur3.chr18 56823613 1591 + 57149010 I a score=3883101.000000 s hg38.chr20_KI270870v1_alt 64290 471 + 183433 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTGTGGGCCACCTCTCCCTCTCCATCCTTTGTCTCCTTTCCTGCCCCTGT-CTGTG------TCTGTCTCTGTGTTTAATCGCCTTGACCCT---GGTCCCTGGA---CCCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTGTCTC----CAGCTCGTATCTCTCCTA-CTGGTTCAGCTGCTTTTTGCCTTTGGCTATCGTTCTGTGCTGGTAGGACCAGGACATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTCCCTCACTGTTCTCCTGGTCCACTCTGGGCGCA------CCTGTCTC-TCCTCCCCAC-TTTCCTCTGCCTCAGGGTGGCCAGGTCATGAGGCG----GGT---GGGGGGGCGGGGGTACTTTCTCGT----------ACTGCTCT-TAGCTTCCTGGGCCCAG----TGCCCAGGGTA--G--TGCCTTCAGC s panTro5.chr20 66389079 471 + 66533130 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTTTGTGTCACCTCTCTCTCTCCATCCTTTGTCTCCTTTCCTGCCCCTGT-CTGTG------TCCGTCTCTGTGTTTAATCCCCTTGACCCT---GGTCCCTGGA---CCCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTGTCTC----CACCTCTTATCTCTCCTA-CTGGTTCAGCTGCTTTTTGCCTTTGGCTATCGTTCTGTGCTGGTAGGACCAGGACATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTCCCTCACTGTTCTCCTGGTCCACTCTGGGCGCA------CCTGTCTC-TCCTCCCCAC-TTTCCTCTGCCTCAGGGTGGCCAGGTCATGAGGCG----GGT---GGGGGGGCGGGGGTACTTTCTCCT----------ACTGCTCT-TAGCTTCCTGGGCCCAG----TGCCCAGGGTA--G--TGCCTTCAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62069647 471 + 62195757 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTTTGTGTCACCTCTCTCTCTCCATCCTTTGTCTCCTTTCCTGCCCCTGT-CTGTG------TCCGTCTCTGTGTTTAATCCCCTTGACCCT---GGTCCCTGGA---CCCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTGTCTC----CACCTCTTATCTCTCCTA-CTGGTTCAGCTGCTTTTTGCCTTTGGCTATCGTTCTGTGCTGGTAGGACCAGGACATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTCCCTCACTGTTCTCCTGGTCCACTCTGGGCGCA------CCTGTCTC-TCCTCCCCAC-TTTCCTCTGCCTCAGGGTGGCCAGGTCATGAGGCG----GGT---GGGGGGGCGGGGGTACTTTCTCCT----------ACTGCTCT-TAGCTTCCTGGGCCCAG----TGCCCAGGGTA--G--TGCCTTCAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 454733 470 - 578057 CTGAGCCGGCCTAGTTTCTGCCTCACCTCTCTGCCTTTGTGTCACCTCTCTCTCTCCATCCTTTGTCTCCTTTCCTGCCCCTGT-CTGTG------TCCGTCTCTGTGTTTAATCCCCTTGACCCT---GGTCCCTGGA----CCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTGTCTC----CACCTCTTATGTCTCCTA-CTGGTTCAGCTGCTTTTTGCCTTTGGCTATCGTTCTGTGCTGGTAGGACCAGGACATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTCCCTCACTGTTCTCCTGGTCCACTCTGGGTGCA------CCTGTCTC-TCCTCCCCAC-TTTCCTCTGCCTCAGGGTGGCCAGGTCATGAGGCG----GGT---GGGGGGGCAGGGGTACTTTCTTGT----------GCTGCTCT-TAGCTTCCTGGGCCCAG----TGCCCAGGGTA--G--TGCCTTCAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982028 419 - 110113093 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTTTGTGTCGCCTCTTTCCCCACATCCTTTGTCTCCTTTCCTGCCCCTGT-CTGTG------TCCGTCTCTGTGTTTAATCCCCTTGACCC-------------------------------------------TCTTTGGCC---TTTGTCTC----CACCTCTTATCTCTCCTG-CTGGTTCAGCTGCTTTTTGCCTGTGGGTATCGTTCTGTGCTGGTAGGACCAGGACGTCGGGGGGTTTCCACCCGTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGC---------------CTCCTGGTCCACTCTGTGCGCA------CCTGTCTC-TCCTCCCCAC-TTTCCTCCGCCCCAGGGTGGCCAGGTCATGAGGTG----GGT---GGCGGGGCAGGGGTACTTTCTCAT----------ACTGCTCT-TAGCTTCCTGGGCCCAG----TGCCCAGGGTC--G--TGCCTTCAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710277 474 - 92844088 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTTTGTCTTACCTCTTTCCCCACATCCTTTGTCTCCTTTCCTGCCTCTGT-CTGTG------TCCATCTCTGTGTTTAATCCCCTTGATCCT---GGTCCCTGGG----CCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTGTCTC----CACCTCTTATCTCTCCTA-CTGGCTCAGCTGCTTTTTGCCTTTGGCTGTCATTCTGTGCTGGTAGGACTAGGGCATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTCACTCACTGTTCTCCTGGTCCACTCTGGGCACA------CCTATCTC-TCCTCCCCAC-TTTCTTCTACCTCAGGGTGGCCAGGTCATGAGGTGGGCAGGC---GGGGGGACGGGGGTACTTTCTCAT----------ACTGCTCT-TAGCTTCCTGGGCCCAT----TGACCAGGGTA--G--TGCCTTCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96377785 474 + 96509753 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTTTGTCTTACCTCTTTCCCCACATCCTTTGTCTCCTTTCCTGCCTCTGT-CTGTG------TCCATCTCTGTGTTTAATCCCCTTGATCCT---GGTCCCTGGG----CCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTGTCTC----CACCTCTTATCTCTCCTA-CTGGCTCAGCTGCTTTTTGCCTTTGGCTGTCATTCTGTGCTGGTAGGACTAGGGCATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTCACTCACTGTTCTCCTGGTCCACTCTGAGCACA------CCTATCTC-TCCTCCCCAC-TTTCTTCTACCTCAGGGTGGCCAGGTCATGAGGTGGGCAGGC---GGGGGGACGGGGGTACTTTCTCAT----------ACTGCTCT-TAGCTTCCTGGGCCCAT----TGACCAGGGTA--G--TGCCTTCAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16848109 475 - 16982598 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTTTGTCTTACCTCTTTCCCCACATCCTTTGTCTCCTTTCCTGCCTCTGT-CTGTG------TCCATCTCTGTGTTTAATCCCCTTGATCCT---GGTCCCTGGG---CCCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTGTCTC----CACCTCTTATCTCTCCTA-CTGGCTCAGCTGCTTTTTGCCTTTGGCTGTCATTCTGTGCTGGTAGGACTAGGGCATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTCACTCACTGTTCTCCTGGTCCACTCTGGGCACA------CCTATCTC-TCCTCCCCAC-TTTCTTCTACCTCAGGGTGGCCAGGTCATGAGGTGGGCAGGC---GGGGGGACGGGGGTACTTTCTCAT----------ACTGCTCT-TAGCTTCCTGGGCCCAT----TGACCAGGGTA--G--TGCCTTCAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3650116 475 - 3785965 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTTTGTCTTACCTCTTTCCCCACATCCTTCGTCTCCTTTCCTGCCTCTGT-CTGTG------TCCATCTCTGTGTTTAATCCCCTTGATCCT---GGTCCCTGGG---CCCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTGTCTC----CACCTCTTATCTCTCCTA-CTGGCTCAGCTGCTTTTCGCCTTTGGCTGTCATTCTGTGCTGGTAGGACTAGGGCATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTCCCTCACTGTTCTCCTGGTCCACTCTGGGCACA------CCTATCTC-TCCTCCCCAC-TTTCTTCTACCTCAGGGTGGCCAGGTCATGAGGTGGGCAGGC---GGGGGGACGCGGGTACTTTCTCAT----------ACTGCTCT-TAGCTTCCTGGGCCCAT----TGACCAGGGTA--G--TGCCTTCAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271500 439 - 90373283 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTTTGTCTTACCTCTTTCCCCACATCCTTTGTCTCCTTTCCTGCCTCTGT-CTGTG------TCCATCTCTGTGTTTAATCTCCTTGATCCT---GGTCCCTGGG---CCCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTGTCTG----CACCTCTTATCTCTCCTA-CTGGCTCAGCTGCTTTTTGCCTTTGGCTGTCATTCTGTGCTGGTAGGACTAGGGCATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGG------------------------------------ACTGTTCTCCTGGTCCACTCTGGGCACA------CCTATCTC-TCCTCCCCAC-TTTCTTCTACCTCAGAGTGGCCAGGTCATGAGGTGGGCAGGC---AGGGGGACGGGGGTACTTTCTCAT----------ACTGCTCT-TAGCTTCCTGGGCCCAT----TGACCAGGGTA--G--TGCCTTCAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 35057 475 - 179258 CTGAGCCGGCCTGGTTTCTGCCTCACCTCTCTGCCTTTGTCTTACCTCTTTCCCCACATCCTTTGTCTCCTTTCCTGCCTCTGT-CTGTG------TCCATCTCTGTGTTTAATCCCCTTGATCCT---GGTCCCTGGG---CCCCCTCCCTGGCCATTGCCTCTGTTTCTTTGGCC---TTTTTCTC----CACCTCTTATCTCTCCTA-CTGGTTCAGCTGCTTTTTGCCTTTGGCTGTCATTCTGTGCTGGTAGGACTAGGGCATCAGGGGGTTTCCACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTCCCTCACTGTTCTCCTGGTCCACTCTGGGCACA------CCTATCTC-TCCTCCCCAC-TTTCTTCTGCCTCAGGGTGGCCAGGTCATGAGGTGGGCAGGC---GGGGGGACGGGGGTACTTTCTCAT----------ACTGCTCT-TAGCTTCCTGGGCCCAT----TGACCAGGGTA--G--TGCCTTCAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5521825 475 - 5823884 CTGAGCTGGACTGGTTTCTGCCTCACCTCTCTGCCTTTGTCTTACCTCTTTCCCCACATCCTTTGTCTCCTTTCCTGCCTCTGT-CTGTG------TCCATCTCTGTGTTTAATCCCCTTGATCCT---GGTCTCTGGG---CCCCCTCCCTGGCCATTGCCTCTATTTCTTTGGCC---TTTGTCTC----CACCTTTTTTCTCTCCTA-CTGGCTCAGCTGCTTTTTGCCTTTGGCTGTTGTTCTGTGCTGGTAGGACCAGGGCATCAGGGGGTTTCTACCCCTGCCTCACCC-TCTTGGATGCTCCTAGAACAGTCAGGCAGGGGCCTGTGCCTCACTGTTCTCCTGGTCCACTCTGGGCACA------CCTATCTC-TCCTCCCCAC-TTTCTTCCACCTCAGGGTGGCCAGGTCATGAGGTGGGCAGGC---AGGGGGACGGGGGTACTTTCTCAT----------ACTGCTCT-TAGCTTCCTGGGCCCAG----TGCCCAGTGTA--G--TGCTTTCAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 2615 469 + 372756 ctgagctggtctggtttctgcttcacatctctgcctttgtctc--ttctctccccacatcctttatct-ccttcctacctctgt-ctgtgtctgtctctgtctc--tgtttAACCCCCTTGACCCT---GGTCTCTGGA----CTCCTCCCTGGCCAGTGCC--TGTTTCTGTGGCC---TTTGTCTC----CACCTCTTATCTCTCCTA-ATGGGTCAGCTGCTTTTTGCCTTTGGCTGTCATTCTGTCCTGGCAGGACCAGTGCATT--GGGGTTTCCACCCCTGCCTTGCCC-TCCTGGATGCTCCT-GGACGGTCAAGCAAGGATCTGTCCCTCACCGCTCTCCTGGTTCACTCTGGGGCCA------CCTGTCTC-TCCTCCCTCC-TTTCCTCTGCCTCAGGGTGGCCAGGTCATGAGGTG----GGCGAGGGTGGGGTGGGGGGGATTTCTCAC----------ACTGCTCT-TAGCTTCCTGGGCCTAT----TCCCAAGGGTA--G--TACCCTCAGC i calJac3.chrUn_GL286459 C 0 I 7 s cebCap1.NW_016107870v1 1110011 461 + 1231380 CTGAGCTGGTCTGGTTTCTGCCTCACCTCTCTGCCTTTGTCTC--TTCTCTCCCCACATCCTTTGTCT-GCTTCCTACCTCTGT-CTGTG------TCTGTCTC--TGTTTAACCCCCTTGACCCT---GGTCTCTGGA----CTCCTCCCTGGCCAGTGCC--TGTTTCTGTGGCC---TTTGTCTT----GACCTCTTATCTCTCCTA-CTGGGTCAGCTGCTTTTTGCCTTTGGCTGTCATTCTGTCCTGGCAGGACCAGTGCATT-GGGGGTTTCCACCCCTGCCTTGCCC-TCCTGGATGCTCCT-GGACGGTCAGGCTGGGATCTGTCCCTCACCACTCTCCTGGTCCACTCTGGGGCCA------CCTGTCTC-TCCTCCCTCC-TTTCCTCTGCCTCAGGGTAGCCAGGTCATGAGGCG----GGC---AGAGGGGTGGGGGGGATTTCTCAC----------ACTGCTCT-TAGCTTCCTGGGCCTAT----TCCCAAGGGTA--G--TGCCCTCAGC i cebCap1.NW_016107870v1 C 0 I 7 s aotNan1.NW_018500483v1 2640014 413 + 11732439 CTGAGCTGGTCTGGTTTCTGCCTCACCTCTCTGCCTTTGTCTC---------------------------CTTCCTACC----T-CTGTG------TCTGTC--------------------CCCT---GGTCTCTGGA----CTCCTCCCTGGCCAGTGCC---GTTTCCGTGGCC---TTTGTCTT----CACCTCTCATCTCTCCTACCTGGGCCAGCTGCTTTTTGCCTTTGGCTGTCATTCTGTCCTGGCAGGACCAGTGTGTC-GGGGGTTTCCACCCCTGCCTCGCCC-TCCGGGATGGTCCT-GAACAGGCAGGCGGGGATCTGTCCCTCGCCGCTCTCCTGGTCCACTCTGGGGCCA------CCTGTCTC-TGCTCCCTCC-TTTCCTCCACCTCAGGGTGGCCAGGTCATGAGGCG----GGT----GGGGGGT-GGGGGGATTTCTCAC----------ACTGCTCT-TACCTTCCTGGGCCTAT----TCCCAAGGGTA--G--TGCCCTCAGC i aotNan1.NW_018500483v1 C 0 I 7 s otoGar3.GL873542 22802675 465 + 22939663 CTGAGTCTGCCTAGGGTCTGCCTCAGCTCCCTGCCTTTGTCTCTCCACCATTCCCACATCCTTTGTTTCCTTTCCTGCCTCTGT-TTGTA------CCCCTCTCCATGTTTAATCTCCTGCACACT---GG-CCCTGGG---CCCCCACC--------TGCCTATGTTTCTTTGCCC---TTTGTCTC---TCTCCACTTCTTGCTTCTC-CTGAGTCAGCTGCCTTTTGCCCTTAATGTCCTTTCTGTCTAGGCAGGACCAGGTCTTCAGGGGGCTTATGGCCCCGCCTT--CC-TCTCGTGTGCTCT--AGATAG-CAGGCAAGGCTCTGCTCC--ACTGC---CCTGGCCTGC-CTGGA---A------CTCCTCTT-TTCTTCCCACTTTTCCTCTGCCTTAGGGTGGAAAGGGTGCGTCACG----GGT---TATGTGTAGGGTGTGTGTGCTCATGCGCATGGACACCACTGT-CAGTTTCCTGGGCCCACC-AACACCCAGGGTAGCG--TGCCCCCAGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181759478 404 + 182113224 ------CAG-------TCTGCTTCAAAGCTTCACC------CCACTTTTCTCTGTCCATGAGTCTACTGAGTTTTGACCTTTGTCCTGGG------TCTTTTTCCACCCTTCCTTACTTGGTCCAT---GTTATCTGTTTATCCATCACCCTTGCAGCCGTGGCTATGAATATGGTC---TTTGTCTCTGTTCACCTCCCGACTTTCCAG-TGTTGTCAGTTGCTCTTTGCTTTTTATTCTCTCTATGTCCTGGTAAAG--AAGGCCTTAAAGGGC---------------------------AGCTTCTGGAACAAGGGATCAAGGGGCTGTCCCTTA-TGTTCCATAGTTTGATTTTGAGCATA------TCTGTCTCATCCTCCCCAG----------CCCCAGTATGGCTAG---------TA----ATT---GGGGACTTAAGGG----------C----------ACTGTGTC-TGGCTTCCTTGGATCTGCTCATACCCTGGGTG--G--AGTCTC---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47571552 337 + 47698779 -CTCGCCGG-CTGACCTCTGCCTCAGTTCTCCGCCTTTGTCCCTCCTTCATCCCCACACC----GTCTCCTGTTTTGCTCGTGG---GTA------TCTGTCCCCGTGTCCCATCACCTGCACCCG---GGTCTCAGCC----CTGCCCC------------------------ACC---TCCACCCT----CAACCCCCACCTGTCTTC--------------TTCTCGTCTT---------CTCTGTCC----------------TCGGGAGGCTTCTGGTCCTG---------------------------------GTCCGGGACC---------------------TCGAGTCTGGACACGTGTGCTCCAAGCTC-CCTTTCCTCC-CCTCCTCTGCCCCAGGATGGCCAGG--------------GGA---GGGGGAGCTGTTGGAC------------------TCTGCTGT-CTGCTTCCTGGCCCCCC----TACCCGGGGCG--GCCTGGCCACAGC i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 207958 312 - 397369 --------------------CCTCGGCTCCTCGT------------------------TCCCTCCTTTCCTCCCCCACCCCCGC-CTGCG------TCTGTCTGTCTGTCTGAGCCCCTGCCTCCTTTGGGTGGCCGGG----ACCCTCTCTGTCCCTGCCTGCCGCTGCTGTGTGCTGATTGGCCCT----CTGCTCTTGTCT-------CTGGCTCAGCT-CCCTCTGCCCTGGGCTCACACTT-----------------------------------CCACTGCCTCCTCTGTCCTGGGG---CCTGAAACCAGCAGGC---------------GCTTGTGCCCTTGCCCA--------GCA------CC-----C-TGCCCCCCAC-T---------CCCAGGGCA--------------------GGC---------------------TCTCGG----------CTTGCTCCGTGAGCCCCCGAGTCTCT----TAC-----GCA--G--T-CCGTCAAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1820867 113 - 2029793 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=226547.000000 s hg38.chr20_KI270870v1_alt 64761 30 + 183433 CTGAGCTT----CTTACT--------CTCCAAGCCC----------TTCACT s panTro5.chr20 66389550 30 + 66533130 CTGAGCTT----CTTACT--------CTCCAAGCCC----------TTCACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070118 30 + 62195757 CTGAGCTT----CTTACT--------CTCCAAGCCC----------TTCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455203 30 - 578057 CTGAGCTT----CTTACT--------CTCCAAGCCC----------TTCACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982447 30 - 110113093 CTGAGCTT----CTTACT--------CTCCAAGCCC----------TTCACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710751 30 - 92844088 CTGAGCTT----CTTACT--------CTCCAAGTCC----------TTCACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378259 30 + 96509753 CTGAGCTT----CTTACT--------CTCCAGGTCC----------TTCACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16848584 30 - 16982598 CTGAGCTT----CTTACT--------CTCCAAGTCC----------TTCACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3650591 30 - 3785965 CTGAGCTT----CTTACT--------CTCCAAGTCC----------TTCACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271939 30 - 90373283 CTGAGCTT----CTTACT--------CTCCAAGTCC----------TTCACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 35532 30 - 179258 CTGAGCTT----CTTACT--------CTCCAAGTCC----------TTCACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522300 30 - 5823884 CTGAGCTT----CTTACT--------CTCCAAGTCC----------TTTACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3091 30 + 372756 CTGAGTTC----CTCACT--------CTCCAAGCCC----------TTGACT i calJac3.chrUn_GL286459 I 7 C 0 s aotNan1.NW_018500483v1 2640434 30 + 11732439 CTGAGTTC----CTCCCT--------CTCCAAGCCC----------TTGACT i aotNan1.NW_018500483v1 I 7 I 1 s otoGar3.GL873542 22803140 21 + 22939663 -------------TCAAA--------CCCCAAGCCT----------CTCACT i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181759882 48 + 182113224 CTTAGCTT----ATGCCTAGACTTTGCTCTGAGCCCAAGTGAACTGTCCACT i mm10.chr2 C 0 I 2 s canFam3.chr24 47571895 30 + 47698779 CGTGACCC----CTCACG--------GTCCCAGTGG----------TTcccc i canFam3.chr24 I 6 I 3 s dasNov3.JH569290 208270 26 - 397369 CTGAGTCCCCAGCTGACA--------CTCCCACC------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1820867 113 - 2029793 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C e cebCap1.NW_016107870v1 1110472 7 + 1231380 I a score=268404.000000 s hg38.chr20_KI270870v1_alt 64791 29 + 183433 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCCG---- s panTro5.chr20 66389580 29 + 66533130 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCCG---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070148 29 + 62195757 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCCG---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455233 29 - 578057 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCCG---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982477 29 - 110113093 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCCG---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92710781 29 - 92844088 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCTG---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378289 29 + 96509753 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCTG---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16848614 29 - 16982598 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCTG---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3650621 29 - 3785965 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCTG---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271969 29 - 90373283 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCTG---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 35562 29 - 179258 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCTG---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522330 29 - 5823884 CTGAGCTCCTCC-CTCTGA-GCCC--AGTCCTG---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3121 30 + 372756 CTGAGTTCCTCC-CTCTGAGGCCC--AGTCTCA---- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1110479 29 + 1231380 CTGAGTTCCTCC-CTCTGA-GCCC--AGTCCTA---- i cebCap1.NW_016107870v1 I 7 C 0 s aotNan1.NW_018500483v1 2640465 29 + 11732439 TTGAGTTCCTCC-CTCTGA-GCCC--AGTCCCA---- i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22803163 19 + 22939663 CCCAGCTCCATC-CCTTTA-G---------------- i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181759932 30 + 182113224 ATGTGTTTTTTTGTTCTGA-ACCC--AAGTGAA---- i mm10.chr2 I 2 C 0 s canFam3.chr24 47571928 29 + 47698779 cctaactctaac-ccctag-tcct--aaccctG---- i canFam3.chr24 I 3 I 204 s dasNov3.JH569290 208296 34 - 397369 CCGAGCCCCCAT-CT-TGA-GCCCCGAGTCCCTCCCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1820867 113 - 2029793 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=1492126.000000 s hg38.chr20_KI270870v1_alt 64820 163 + 183433 CTGTTCATTGAATGTGCTTCCGTTTCCCGCCCTGCGGCCTTCACTCATGCTGTGCCCT-------CACCCTTTCCTGGTCAGGCCTCCCTGTCAGGAGCT---TCTG--TCTCTCTCTCCAC------------------------------AGGG----CTGGACAGATGCAGCATCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC s panTro5.chr20 66389609 172 + 66533130 CTGTTCATTGAATGTGCTTCCGTTTCCCGCCCTGCGGCCTTCACTCATGCTGTGCCCTCACCTAACACCCTTTCCTGGTCAGGCCTCCCTGTCAGGAGCT---TCTGTCTCTCTCTCTCCAC------------------------------AGGG----CTGGACAGATGCAGCATCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070177 172 + 62195757 CTGTTCATTGAATGTGCTTCCGTTTCCCGCCCTGCGGCCTTCACTCATGCTGTGCCCTCACCTAACACCCTTTCCTGGTCAGGCCTCCCTGTCAGGAGCT---TCTGTCTCTCTCTCTCCAC------------------------------AGGG----CTGGACAGATGCAGCATCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455262 170 - 578057 CTGTTCATTGAATGTGCTTCCGTTTCCTGCCCTGCGGCCTTCACTCATGCTGTGCCCTCACCTAACACCCTTTCCTGGTCAGGCCTCCCTGTCAGGAGCT---TCTG--TCTCTCTCTCCAC------------------------------AGGG----CTGGACAGATGCAGCATCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982506 170 - 110113093 CTGTTCATTGAATGTGCTTCCATTTTCCGCCCTGCAGCCTTCACTCATGCTGTGCCCTCACCTAACACCCCTTCCTGGTCAGGCCTCCCTGTCAGGAGCT---TGTG--TCTCTCTCTCCAC------------------------------AGGG----CTGGGCAGATGCAGCGTCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i nomLeu3.chr13 C 0 I 1870 s rheMac8.chr10 92710810 170 - 92844088 CTGTTCATTGAATGTGCTTCCCTTTCCTGCCATGCGGCCTTCACTCATGCTGTGCCCTCACCTAACACTCCTTCCTGGTCAGGCCTCCCTGTCAGGACCT---TGTG--TCCCTCTCTTCAC------------------------------AGGA----CTGGGCAGGTGCAGCATCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378318 170 + 96509753 CTGTTCATTGAATGTGCTTCCCTTTCCTGCCATGCGGCCTTCACTCATGCTGTGCCCTCACCTAACACTCCTTCCTGGTCAGGCCTCCCTGTCAGGACCT---TGTG--TCCCTCTCTCCAC------------------------------AGGA----CTGGGCAGGTGCAGCATCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16848643 170 - 16982598 CTGTTCATTGAATGTGCTTCCCTTTCCTGCCATGCGGCCTTCACTCATGCTGTGCCCTCACCTAACACTCCTTCCTGGTCAGGCCTCCCTGTCAGGACCT---TGTG--TCCCTCTCTCCAC------------------------------AGGA----CTGGGCAGGTGCAGCATCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3650650 170 - 3785965 CTGTTCATTGAATGTGCTTCCCTTTCCTGCCATGCGGCCTTCACTCATGCTGTGCCCTCACCTAACACTCCTTCCTGGTCAGGCCTCCCTGTCAGGACCT---TGTG--TCCCTCTCTCCAC------------------------------AGGA----CTGGGCAGGTGCAGCATCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90271998 170 - 90373283 CTGTTCATTGAATGTGCTTCCCTTTCCTGCCATGCGGCCTTCACTCATGCTGTGCCCTCACCTAACACTCCTTCCTGGTCAGGCCTCCCTGTCAGGACCT---TGTG--TCCCTCTCTCCAC------------------------------AGGA----CTGGGCAGATGCAGCGTCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 35591 170 - 179258 CTGTTCATTGAATGTGCTTCCCTTTCCTGCCATGCGGCCTTCACTCATGCTGTGCCCTCACCTAACACTCCTTCCTGGTCAGGCCTCCCTGTCAGGACCT---TGTG--TCCCTCTCTCCAC------------------------------AGGA----CTGGGCAGGTGCAGCATCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522359 170 - 5823884 CTGTTCATTGAATGTGCTTCCCTTTCCTGCCATGTGGCCTTCACTCATGCTGTGCCCTCACCTATCACTCCTTCCTGGTCAGGCCTCCCTGTCAGGACCT---TGTG--TCCCTCTCTTCAC------------------------------AGGA----CTGGGCAGGTGCAGCGTCCTGGGCTCAGCATGGAGCCTCCTGGCTTCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3151 168 + 372756 CTGTTCACTGAATGTGTTTCCCTTTCCAGCCATGCAGACTTCGCTCAGGCTGTGCCCT-GCCTAATGCCCCTTCCTGGTCGGGTCTCCCTGTCAGGAGCT---TCT---TCCCTCTCCCCAT------------------------------GAGG----CTGGGCAGGTGCCATGTCCTGGGCTCAGCATGGGGCCTCCTGGCTTCTC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1110508 169 + 1231380 CTGTTCACTGACTGTGCTTCCCTTTCCAGCCATGTGGCCTTCGTTCATGCTGTGCCCT-GCCTAATGCCCCTTCCTGGTCGGGTCTCCCTGTGAGGAGCT---TCTG--TCCCTGTCCCCAC------------------------------AAGG----CTGGGCAGGTGCCATGTCCTGGGCTCAGCATGGGGCCTCCAGGCTTCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2640494 169 + 11732439 CCGTTCACTGAATGTGCTTCCCTTTCTGGCCGTGCGGCCTTCGCTCATGCTGCGCCCT-GCCTAATGCCCCTTCCTGGTCGGGTCTCCCTGTCAGGAGCT---TCTG--TCCCTCTCCGCAC------------------------------GAGG----CTGGGCAGGTGCCATGTCCTGGGCTCAGCATGGGGCCTCCTGGCTTCTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22803182 106 + 22939663 ----------------------------GCCACATGGCCAGTACTCA-GCTGTGCTCTCACTTGAGACTCCTTTCCAGTCAGGTCCCCCAG-CAGGA-------CTA------------------------------------------------------TAGGCAGGTGCAGTGTCCTGG------------GCCACCTGGCTTTTT i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181759962 201 + 182113224 CTGTCCACTGAATGTGTTTTCCCTTCTAGCCACACAGCCTtctctctctctctctctctctctctctctctctctctctc-tctctctctctctcttcctctctctc--tctctctcACCCCCTGTGGGTTTAGTTAATACTCATCCCTTCTAGGAGATTTTGGATAAGCACAGTATCCTAGGC-CAGCA----GGCTCCTCATTCACT i mm10.chr2 C 0 I 9 s dasNov3.JH569290 208330 138 - 397369 CTGG--ACTGCATGTCTCTTGCCTTCTGGC--TGTGGCCTTTGCTCAGGTTGCGCCCCCACTGGACACCCCT--CTGGTT--GTCTCCCTGTCAGAAGCT---C-----ACCCCGCCTCTAC------------------------------GAGA----CTGGACTCTCCCTCACACCTGCTCTCGG--------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1820867 113 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=410724.000000 s hg38.chr20_KI270870v1_alt 64983 48 + 183433 ---CAAACCACGCATGGCTGAGCTTGCAGCCTT---GTTCAGCTGACCCTGCCC s panTro5.chr20 66389781 48 + 66533130 ---CAAACCACGCATGGCTGAGCTTGCAGCCTT---GTTCAGCTGACCCTGCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070349 48 + 62195757 ---CAAACCACGCATGGCTGAGCTTGCAGCCTT---GTTCAGCTGACCCTGCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455432 48 - 578057 ---CAAACCACGAATGGCTGAGCTTGCAGCCTT---GTTCAGCTGACCCTGCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984546 48 - 110113093 ---CAAACCATGCATGGCTGAGCTTGCAGCCGT---GTTCAGCTGCCCCTGTCC i nomLeu3.chr13 I 1870 C 0 s rheMac8.chr10 92710980 48 - 92844088 ---CCAACTATGCATGATTGAGCTTGCAGCCTT---GTTCAGCTGCCCCTGCCC i rheMac8.chr10 C 0 I 24 s macFas5.chr10 96378488 48 + 96509753 ---CCAACTATGCATGATTGAGCTTGCAGCCTT---GTTCAGCTGCCCCTGCCC i macFas5.chr10 C 0 I 17 s macNem1.NW_012014244v1 16848813 48 - 16982598 ---CCAACTATGCATGATTGAGCTTGCAGCCTT---GTTCAGCTGCCCCTGCCC i macNem1.NW_012014244v1 C 0 I 24 s cerAty1.NW_012001373v1 3650820 48 - 3785965 ---CCAACTATGCATGATTGAGCTTGCAGCCTT---GTTCAGCTGCCCCTGCCC i cerAty1.NW_012001373v1 C 0 I 24 s chlSab2.chr2 90272168 48 - 90373283 ---CCAACTATGCATGGTTGAGCTTGCAGCCTT---GTTCAGCTGCCCCTGCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 35761 48 - 179258 ---CCAACTATGCATGATTGAGCTTGCAGCCTT---GTTCAGCTGCCCCTGCCC i manLeu1.NW_012101652v1 C 0 I 24 s colAng1.NW_012114444v1 5522529 48 - 5823884 ---CCAACCACGCATGGTTGAGCTTGCAGCCTT---GTTCAGCTGCCCCTGCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3319 47 + 372756 ---CTGGCCACGCATGGCTACGCTTGCAGCCTT---GTTCAGCTGA-CTTGCCC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1110677 47 + 1231380 ---CCAGCCACACATGGCTGTGCCTGCAGCCTT---GTTCAGCTGA-CCTGTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2640663 47 + 11732439 ---CTGGCCACGCATGGCTGTGGTTGCAGCCGC---GTCCAGCTGA-CTTGCCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22803289 51 + 22939663 ---CCAACTCTGCCTGGCTGAGCTTACTGTCTCTGAGTTTGGCTATCCCTGCTG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181760172 45 + 182113224 ----GAAATAAAT-TAGCTGAACTGGGCATCTT---GTTGAACTGCCTTTCCC- i mm10.chr2 I 9 C 0 s dasNov3.JH569290 208468 47 - 397369 GAGCTGACC---CACGGCT-AGTTCTCGGTCTT---GTCCAGCTGCCCCTGCCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1820867 113 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=9919.000000 s hg38.chr20_KI270870v1_alt 65031 7 + 183433 T------GCAGGC s panTro5.chr20 66389829 7 + 66533130 T------GCAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070397 7 + 62195757 T------GCAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455480 7 - 578057 T------GCAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984594 7 - 110113093 T------GCAGGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96378553 5 + 96509753 --------CAGAG i macFas5.chr10 I 17 I 2 s chlSab2.chr2 90272216 12 - 90373283 -GCGGGGGCAGAG i chlSab2.chr2 C 0 I 12 s colAng1.NW_012114444v1 5522577 6 - 5823884 -------GCAGGG i colAng1.NW_012114444v1 C 0 I 18 s calJac3.chrUn_GL286459 3366 7 + 372756 T------GCAGGC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1110724 7 + 1231380 T------GCAGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2640710 7 + 11732439 T------GCAGGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22803340 4 + 22939663 T------GCA--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181760217 7 + 182113224 T------GCAAGT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 208515 4 - 397369 T------GCC--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1820867 113 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e cerAty1.NW_012001373v1 3650868 24 - 3785965 I e micMur3.chr18 56823613 1591 + 57149010 I e manLeu1.NW_012101652v1 35809 24 - 179258 I e saiBol1.JH378156 16243114 0 + 16356641 C e macNem1.NW_012014244v1 16848861 24 - 16982598 I e rheMac8.chr10 92711028 24 - 92844088 I a score=1329722.000000 s hg38.chr20_KI270870v1_alt 65038 202 + 183433 CCCTCTGAGCTCCACAGAGCGTTGACACCAGTCTGACTTCCAG----GGGGATGGGAAGGAAG------CC--CCTCTGCAGCTGCTTCCAGTTCTTCCTGAGGCCTGGCCTAGGCTGCCCCTGCTGCAGG--GAGCTGTCTCCTCTGGTGCCACAGCAGTCACGGTGACTTTGCCTTCTCCTGCCGGTGCCCCC-AGCCCTCAGCTGTCTCTCCTC s panTro5.chr20 66389836 203 + 66533130 CCCTCTGAGCTCCACAGAGCGTTGACACCAGTCTGACTTCCAG----GGGGATGGGAAGGAAG------CC--CCTCTGCAGCTGCTTCCAGTTCTTCCTGAGGCCTGGCCTAGGCTGCCCCTGCTGCAGG--GAGCTGTCTCCTCCGGTGCCACAGCAGTCACGGTGACCTTGCCTTCTCCTGCCGGTGCCCCCAAGCCCTCAGCTGTCTCTCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070404 203 + 62195757 CCCTCTGAGCTCCACAGAGCGTTGACACCAGTCTGACTTCCAG----GGGGATGGGAAGGAAG------CC--CCTCTGCAGCTGCTTCCAGTTCTTCCTGAGGCCTGGCCTAGGCTGCCCCTGCTGCAGG--GAGCTGTCTCCTCCGGTGCCACAGCAGTCACGGTGACCTTGCCTTCTCCTGCCGGTGCCCCCAAGCCCTCAGCTGTCTCTCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455487 192 - 578057 CCCTCTGAGCTCCACAGAGCGTTGACACCAGTCTGACTTCCAG----GGGGATGGGAAGGAAG------CC--CCTCTGCAGCTGCTTCCAGGTCTTTCTGAGGCCTGGCCTAGGCTGCCCCTGCTGCAGG--GAGCTGTCTCCTCCGGTGCCACAGCAGTCACGGTGACCTTGCCTTCTCCTGCCGGTGCCCCC-AGCCCTCAGCT---------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984601 202 - 110113093 CCCTCTGAGCTCCGCAGAGCTTTGACACCAGTCTGACTTGCAG----GGGGCTGGGAAGGTAG------CC--CCTCTGCAGCTGCTTCCAGTTCTTTCTGAGGCCTGGCCTAGGTTACCCCTGCTGCAGG--GAGCTGTCTCCTCCGGTGCCACAGCAGTCACAGTGACCTTGCCTTCTCCTGCCGGTGCTGCC-AGCCCTCAGCTGTCTCTCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711052 170 - 92844088 CCCTCTGAGCTCTGCAGAACTTTGACACCAGTCTGACTTGCAG----GGGGATGGAAAGGAAG------CC--CCTCGGCAACTGCTTCCAGTTCTTCTTGAGT-TTGGCCTAGGTTGCCGCTGCTGCAGG--GAGCTG-------------------------------CTTGCCTTCTCCTGCTGGTGCCCCC-AACCCTCAGCTGTCTCTCCTC i rheMac8.chr10 I 24 C 0 s macFas5.chr10 96378560 170 + 96509753 CCCTCTGAGCTCTGCAGAACTTTGACACCAGTCTGACTTGCAG----GGGGATGGAAAGGAAG------CC--CCTCGGCAACTGCTTCCAGTTCTTCTTGAGG-TTGGCCTAGGTTGCCGCTGCTGCAGG--GAGCTG-------------------------------CTTGCCTTCTCCTGCTGGTGCCCCC-AACCCTCAGCTGTCTCTCCTC i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16848885 170 - 16982598 CCCTCTGAGCTCTGCAGAACTTTGACACCAGTCTGACTTGCAG----GGGGATGGAAAGGAAG------CC--CCTCGGCAACTGCTTCCAGTTCTTCTTGAGG-TTGGCCTAGGTTGCCGCTGCTGCAGG--GAGCTG-------------------------------CTTGCCTTCTCCTGCTGGTGCCCCC-AACCCTCAGCTGTCTCTCCTC i macNem1.NW_012014244v1 I 24 C 0 s cerAty1.NW_012001373v1 3650892 170 - 3785965 CCCTCTGAGCTCTGCAGAACTTTGACACCAGTCTGACTTGCAG----GGGAATGGAAAGGAAG------CC--CCTCGGCAACTGCTTCCAGTTCTTCTTGAGG-TTGGCCTAGGTTACCGCTGCTGCAGG--GAGCTG-------------------------------CTTGCCTTCTCCTGCTGGTGTCCCC-AACCCTCAGCTGTCTCTCCTC i cerAty1.NW_012001373v1 I 24 C 0 s chlSab2.chr2 90272240 170 - 90373283 CCCTCTGAGCTCTGCAGATCTTTGACACCAGTCTGACTTGCAG----GGGGATGGAAAGGAAG------CC--CCTCGGCAACTGCTTCCAGTTCTTCCTGAGG-TTGGCCTAGGTTGCCGCTGCTGCAGG--GAGCTG-------------------------------CTTGCCTTCTCCTGCTGGTGCCCCC-AACCCTCAGCTGTCTCTCCTC i chlSab2.chr2 I 12 C 0 s manLeu1.NW_012101652v1 35833 169 - 179258 CCCTCTGAGCTCTGCAGAACTTTGACACCAGTCTGACTTGCAG----GGGGATGGAAAGGAAG------CC--CCTCGGCAACTGCTTCCAGTTCTTCTTGAGG-TTGGCCTAGGTTGCCGCTGCTGCAGG--GAGCTG-------------------------------CTTGCCTTCTCCTGCTGGTGTCCCC-AA-CCTCAGCTGTCTCTCCTC i manLeu1.NW_012101652v1 I 24 C 0 s colAng1.NW_012114444v1 5522601 170 - 5823884 CCCTCTGAGCTCTGCAGAGCTTTGACACCAGTCTGACTTGCAG----GGGGATGGAAAGGAAG------CC--CCTCAGCAACTGCTTCCAGTTCTTCCTGAGG-TTGGCCTAGGTTGCCGCTGCTGCAGG--GAGCTG-------------------------------CTTGCCTTCTCCTGCTGGTGCCCCC-AGCCCTCAGCTGTCTCTCCTC i colAng1.NW_012114444v1 I 18 C 0 s calJac3.chrUn_GL286459 3373 195 + 372756 CCTTCTGAGCTCCACAGAGCTTTGACACCAGCCTGACTTGCAT----G-----GGATGAGAAG------CC--CCTCTGGAACTGCTTCCAGTTCTTC-TGAGGCCTGGCCTAAGTTGCCCCTGCTGCAGG--GAGATATCTCCTCCACTACCACAGCAGCCACAGTGACCTTGCCTTCTGCTGGTGGTGCCCCA-AGCCCTCAG-TGTCTCtcctc i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1110731 193 + 1231380 CCCTCTGAGCTCCGCAGAGCTTTGACACCAGCCTGACTTGCAG----G-----GGATGAGAAG------CC--CCTCTGGAACTGCTTCCAGTTCTTC-TGAGGCCTGGCCTAAGTTGTCCCCGCTGCAGG--GAGATGTCTCCTCCACTGCCACAGCAGCCACAGTGACCTTGCCTTCTGCTGGCGGTGCCCCA-AGCCCT--G-tgtctctcctc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2640717 191 + 11732439 CCCTCTGAGCTCCGCAGAGCTTTGACACCAGCCTGACTTGCAG----G-----GGATGAGGAG------CC--CC-CCAGAACTGCTTCCAGTTCTTC-TGAGGCCTGGCCTAAGTTG-CCCTGCTGCAGG--GAGATGTCTCCCCCACTGCCACA-CAGCCACGGAGACCTTGCCTTTTGCTGGCGGTGCCCCA-AGCCCC-AG-TGtctctcctc i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22803344 131 + 22939663 -----------------------------------------------AGGGCTGGGAAGGGAG------CCTATCCCTGGACCTATTTCTGGTTCTTCCCAAGG-TTGA--------GCCTGTACTGCAGG--GAAATGTCTTCTACTGTGCTGTGGCGGCCATGTTGATACTGTC--------------CCTTC-AAACTTCAGGTGTC------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181760224 160 + 182113224 CACTCTGAGGTCAA------TTACACCCTATTCTAGCTTGGTGCATAGGAGATAGACAGGAAAGTGGTCTC--TCTCTGGA---GATTCCAATCCTACCTGAGGTCTGATTTAGATAGTTCATGCTACAAG--GAAATG-------------------------------CTT---CATTCCTGATGTGGCGTCA-AG------GGTAGCTCTC--- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 208519 163 - 397369 ---------------------TTGGTGCCAGCCTGGAGTCCAC----AAGGATGGAA--GCTG------CT--CCCCAG--GCTGCTGCCagttcctccttaagtctgacctagactgcacatgctgcaggacaagcccactcctcctgggctgtGGCAGTGACAG------CGCTTTCTCCAGCTGG------C-AG----GGGGTGCCCTTCCGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1820867 113 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=240926.000000 s hg38.chr20_KI270870v1_alt 65240 34 + 183433 TGTCTT----------------------TCCTCTGTCC---CCACATCCTTTGTCTCCT- s panTro5.chr20 66390039 34 + 66533130 CGTCTT----------------------TCCTCTGTCC---CCACATCCTTTGTCTCCT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070607 34 + 62195757 CGTCTT----------------------TCCTCTGTCC---CCACATCCTTTGTCTCCT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455679 33 - 578057 -GTCTT----------------------TCCTCTGTCC---CCACATCCTTTGTCTCCT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984803 34 - 110113093 TGTCTT----------------------TCCTCTGTCC---CCACATCCTTTATCTCCT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711222 34 - 92844088 TGTCTT----------------------TCCTCTGTCC---CAGCATCCTTTGTCTCCT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378730 34 + 96509753 TGTCTT----------------------TCCTCTGTCC---CAGCATCCTTTGTCTCCT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849055 34 - 16982598 TGTCTT----------------------TCCTCTGTCC---CAGCATCCTTTGTCTCCT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651062 34 - 3785965 TGTCTT----------------------TCCTCTGTCC---CAGCATCCTTTGTCTCCT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272410 34 - 90373283 TGTCTT----------------------TCCTCTGTCC---CAGCATCCTTTGTCTCCT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36002 34 - 179258 TGTCTT----------------------TCCTCTGTCC---CAGCATCCTTTGTCTCCT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522771 34 - 5823884 TGTCTT----------------------TCCTCTGTCC---CCGCATCCTTTGTCTCCT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3568 59 + 372756 tgtctttcttctgtcctttgtctgtccttcctctgtcctCTCCACATCCTTTGTATCCT- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1110924 59 + 1231380 tgtctttcctctgtcctttgtctgtccttcctctgtcctcACCACATCCTTTGTCTCCT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2640908 33 + 11732439 tg--------------------------tcctctgtcctctccacgtcctttgtcTCCT- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1820980 34 - 2029793 TGTCTC----------------------TCCTCTGTCC---CCACGTCCTTTGTTTCCT- i proCoq1.NW_012150197v1 I 113 I 1673 s otoGar3.GL873542 22803475 3 + 22939663 ------------------------------------------------CTT--------- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181760384 27 + 182113224 ---TTT----------------------CCATCCCTTC---CAATAG----TGCTTCCT- i mm10.chr2 C 0 I 2 s dasNov3.JH569290 208682 33 - 397369 --TCTC----------------------CTAGTGATGA---CCTCCTTCCTTGTTCTTGG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47571957 204 + 47698779 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=341489.000000 s hg38.chr20_KI270870v1_alt 65274 40 + 183433 GGGCTGGGCTGTTGCTGAGG------CTGCTGTGAGATG--CACAGAT-- s panTro5.chr20 66390073 40 + 66533130 GGGCTGGGCTGTTGCTGAGG------CTGCTGTGAGATG--CACAGAT-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070641 40 + 62195757 GGGCTGGGCTGTTGCTGAGG------CTGCTGTGAGATG--CACAGAT-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455712 40 - 578057 GGGCTGGGCTGTTGCTGAGG------CTGCTGTGAGATG--CACAGAT-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984837 40 - 110113093 GGGCTGGGCTGTTGCTGAGG------CTGCTGTGAGATG--CACAGAT-- i nomLeu3.chr13 C 0 T 2101 s rheMac8.chr10 92711256 40 - 92844088 GGGCTGGACTGTGGCTGAGG------CGGCTCTGAGATG--CACAGAC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378764 40 + 96509753 GGGCTGGACTGTTGCTGAGG------CGGCTCTGAGATG--CACAGAC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849089 40 - 16982598 GGGCTGGACTGTTGCTGAGG------CGGCTCTGAGATG--CACAGAC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651096 40 - 3785965 GGGCTGGACTGTTGCTGAGG------CTGCTCTGAGATG--CACAGAC-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272444 40 - 90373283 GGGCTGGACTGTTGCTGAGG------CTGCTGTGAGATG--CACAGAC-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36036 40 - 179258 GGGCTGGACTGTTGCTGAGG------CTGCTCTGAGATG--CACAGAC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522805 40 - 5823884 GGGCTGGACTGTTGCTGAGG------CTGCTGTGAGATG--CACAGAC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3627 39 + 372756 GGGCTGGGCTGTTGCTAAGG------CTGCTATGAGATG--CACAGA--- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1110983 39 + 1231380 GGGATGGGCTGTTGCTGAGG------CCGCTGTGAGATG--CACAGA--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2640941 39 + 11732439 GGGCTGGGCTGTTGCTGAGG------CTGCTATGAGAGC--CACAGA--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22803479 41 + 22939663 GGCCTCAGCTATTAATGAAT------CTGCTGCCAGCTGACCACAGA--- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181760413 27 + 182113224 GGCCTAGGCTGCTATAAAAT------CTGCTGT----------------- i mm10.chr2 I 2 C 0 s dasNov3.JH569290 208715 48 - 397369 GGACCTGCCCCCCTCAGAGGAGGGGTCTGCTAGGAGCTG--CCCACAGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=903167.000000 s hg38.chr20_KI270870v1_alt 65314 91 + 183433 CCCCAGGACCCTTGGGCTGGCCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCTCTGAGCAGCTTCTGTCCTCCAGGTCACTCTGCT s panTro5.chr20 66390113 91 + 66533130 CCCCAGGACCCTTGGGCTGGCCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCCCTGAGCAGCTTCTGTCCTCCAGGTCACTCTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070681 91 + 62195757 CCCCAGGACCCTTGGGCTGGCCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCCCTGAGCAGCTTCTGTCCTCCAGGTCACTCTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455752 91 - 578057 CTCCAGGACCCTTGGGCTGGCCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCTCTGAGCAGCTTCTGTCCTCCGGGTCACTCTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982776 87 - 110113093 CCCCAGGA-CCTTGGGCTGG-CCC-CTCAGAGGC-TGAGGGCCTGGTGACCT-GG--TCCTCTGAGCAGCTTGTGTCCTACAGGTCACTCTGCT i nomLeu3.chr13 T 2101 C 0 s rheMac8.chr10 92711296 91 - 92844088 CCCCAGGACCCTTGGGCTGGTCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCTCTGAGCAGCTTCTGTCCTCCAGGTCACTCTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378804 91 + 96509753 CCCCAGGACCCTTGGGCTGGTCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCTCTGAGCAGCTTCTGTCCTCCAGGTCACTCTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849129 91 - 16982598 CCCCAGGACCCTTGGGCTGGTCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCTCTGAGCAGCTTCTGTCCTCCAGGTCACTCTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651136 91 - 3785965 CCCCAGGACCCTTGGGCTGGTCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCTCTGAGCAGCTTCTGTCCTCCAGGTCACTCTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272484 91 - 90373283 CCCCAGGACCCTTGGGCTGGTCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCTCTGAGCAGCTTCTGTCCTCCAGGTCACTCTGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36076 91 - 179258 CCCCAGGACCCTTGGGCTTGTCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCTCTGAGCAGCTTCTGTCCTCCAGGTCACTCTGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522845 91 - 5823884 CCCCAGGACCCTTGGGCTGGCCCC-CTCAGAGGCTTGAGGGCCTGGTGACCTGGG--TCCTCTGAACAGCTTCTGTCCTCCAGGTCACTCTGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3666 91 + 372756 CCCTGGGACCCTTGTGCTGGGCTC-CTCAGGGGCTTGAGGGTCTGGTGACCTGGG--TCCTCCGAGTGGCTTCTGTTCTCCAGGTGTCTCTGCT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1111022 91 + 1231380 CCCCAGGACCCTTGTGCTGGGCTC-CTCAGGGGCTTGAGGGTCTGGGGACCTGGG--TCTTCCGAGTGACTTCGGTTCTGCAGATCACTCTGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2640980 91 + 11732439 CCCCAGGACCCTTGTGCTGGGCTC-CTCAGGGGCTTGAGGGTCTGGTGACCTGGG--TCCTCTGAGTGGCTTCTGTTCTCCAGGTCACTCTGCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22803520 92 + 22939663 CCCCAGGCCCCTTGGGCTGGACCCTCCCAGAGGTCTGAGGGCCCTATGATGTGTG--TTTTCAGAGGGGCTTCTGTCCTCCAGATCCATCTGCT i otoGar3.GL873542 C 0 I 4 s mm10.chr2 181760440 89 + 182113224 ---TAGGACCCTGAGTTTGGGTTT-CTTGGGAGCTTGAAGACTTC-TGACTGGAGTTTCTACTGAGTGACTTCTGCTCTGCAGACCAATTTGCT i mm10.chr2 C 0 I 1400 s dasNov3.JH569290 208763 59 - 397369 -GCCGGGACCCCTTGCCCAGGCCG-C---------------------GACT---A--TTCTCTGAGGACGGTTGGTCC--CAGGTCGAT----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=336651.000000 s hg38.chr20_KI270870v1_alt 65405 50 + 183433 GTTT-----------------CAGCATCCCCACAGCC----CAGCCAACC---CCCTAGGATGCCGCCTTCCAA- s panTro5.chr20 66390204 50 + 66533130 GTTT-----------------CAGCATCCGCACAGCC----CAGCCAACC---CCCTAGGATGCCGCCTTCCAA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070772 50 + 62195757 GTTT-----------------CAGCATCCGCACAGCC----CAGCCAACC---CCCTAGGATGCCGCCTTCCAA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455843 49 - 578057 GTTT-----------------CAGCATCTGCACAGCC----CAGCCAA-C---CCCTAGGATGCCGCCTTCCAA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982863 52 - 110113093 GTTTCCA--------------CAGCATCCACACAGCC----CAGCCAA-C---CCCTAGGATGCCGCCTTCCAA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711387 50 - 92844088 GTTTCAGC-------------CAGCATCCACACAGCC----CATCCA-------CCTAGGATGCCTCCTTCCAA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378895 50 + 96509753 GTTTCAGC-------------CAGCATCCACACAGCC----CATCCA-------CCTAGGATGCCTCCTTCCAA- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849220 50 - 16982598 GTTTCAGC-------------CAGCATCCACACAGCC----CATCCA-------CCTAGGATGCCTCCTTCCAA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651227 50 - 3785965 GTTTCAGC-------------CAGCATCCACACAGCC----CATCCA-------CCTAGGATGCCTCCTTCCAA- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272575 50 - 90373283 GTTTCAGC-------------CAGCATCCACACAGCC----CATCCA-------CCTAGGATGCCTCCTTCCAA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36167 50 - 179258 GTTTCAGC-------------CAGCATCCACACAGCC----CATCCA-------CCTAGGATGCCTCCTTCCAA- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522936 54 - 5823884 GTTTCAGC-------------CAGCATCCACACAGCC----CAGCCAACC---CCCTAGGATGCCTCCTTCCAA- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3757 57 + 372756 GTTTCAGC-------------CAGCATCTGCACAGCC----CAGCCAACTAAACAGTAGGATGGCTCCTTCCAA- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1111113 54 + 1231380 GTTTCAGC-------------CGGCATCTGCACAGCC----CAGCCAACC---CCCTAGGATGGCTCCTTCCAA- i cebCap1.NW_016107870v1 C 0 I 151 s aotNan1.NW_018500483v1 2641071 54 + 11732439 GTTTCAGC-------------CGGCCTCTGCACAGCC----CAGCCAACC---CCCTAGCACGGCTCCTTCCAA- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22803616 67 + 22939663 GCCCCAGCTATGTCCCCTTGGCCATGTCCACTCAGCC----CAGTCAATT---CCATACGATAGTTTGTTCCAA- i otoGar3.GL873542 I 4 C 0 s dasNov3.JH569290 208822 54 - 397369 -----GCC-------------CCCCATCCCTGCAGTCCTCACTTCCAGAC---ACCGCGGGAGGCTGAGTCCAAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=25290.000000 s hg38.chr20_KI270870v1_alt 65455 3 + 183433 GGT---- s panTro5.chr20 66390254 3 + 66533130 GGT---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070822 3 + 62195757 GGT---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455892 3 - 578057 GGT---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982915 3 - 110113093 GGT---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711437 3 - 92844088 GGT---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378945 3 + 96509753 GGT---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849270 3 - 16982598 GGT---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651277 3 - 3785965 GGT---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272625 3 - 90373283 GGT---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36217 3 - 179258 GGT---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522990 3 - 5823884 GGT---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3814 3 + 372756 GGT---- i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2641125 3 + 11732439 GGT---- i aotNan1.NW_018500483v1 C 0 I 171 s otoGar3.GL873542 22803683 3 + 22939663 GGT---- i otoGar3.GL873542 C 0 I 88 s dasNov3.JH569290 208876 7 - 397369 GGCCTGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C e cebCap1.NW_016107870v1 1111167 151 + 1231380 I a score=19091.000000 s hg38.chr20_KI270870v1_alt 65458 3 + 183433 CAT s panTro5.chr20 66390257 3 + 66533130 CAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070825 3 + 62195757 CAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455895 3 - 578057 CAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982918 3 - 110113093 CAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711440 3 - 92844088 CAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378948 3 + 96509753 CAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849273 3 - 16982598 CAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651280 3 - 3785965 CAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272628 3 - 90373283 CAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36220 3 - 179258 CAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522993 3 - 5823884 CAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3817 3 + 372756 AGT i calJac3.chrUn_GL286459 C 0 I 166 s otoGar3.GL873542 22803774 3 + 22939663 TGT i otoGar3.GL873542 I 88 I 30 s dasNov3.JH569290 208883 3 - 397369 CCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C e cebCap1.NW_016107870v1 1111167 151 + 1231380 I e aotNan1.NW_018500483v1 2641128 171 + 11732439 I a score=213041.000000 s hg38.chr20_KI270870v1_alt 65461 21 + 183433 GGCCCTGGGT-------------------------cagg------gcagagc s panTro5.chr20 66390260 21 + 66533130 GGCCCTGGGT-------------------------cagg------gcagagc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070828 21 + 62195757 GGCCCTGGGT-------------------------cagg------gcagagc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455898 21 - 578057 GGCCCTGGGT-------------------------CAGG------GCAGAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982921 21 - 110113093 GGCCCTGGGT-------------------------CAGG------GCAGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711443 21 - 92844088 GGCCCTGGGT-------------------------CAGG------GCAGAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378951 21 + 96509753 GGCCCTGGGT-------------------------CAGG------GCAGAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849276 21 - 16982598 GGCCCTGGGT-------------------------CAGG------GCAGAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651283 21 - 3785965 GGCCCTGGGT-------------------------CAGG------GCAGAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272631 21 - 90373283 GGCCCTGGGT-------------------------CAGG------GCAGAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36223 21 - 179258 GGTCCTGGGT-------------------------CAGG------GCAGCGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5522996 21 - 5823884 GGCCCTGGGT-------------------------CAGG------GCAGAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 3986 21 + 372756 GGCCCTGGGT-------------------------CATT------GCAGAGC i calJac3.chrUn_GL286459 I 166 C 0 s cebCap1.NW_016107870v1 1111318 21 + 1231380 GGCTCTGGGT-------------------------CATG------GCAGAGC i cebCap1.NW_016107870v1 I 151 C 0 s aotNan1.NW_018500483v1 2641299 21 + 11732439 GGCCCTGGGT-------------------------CATG------GCAGAGC i aotNan1.NW_018500483v1 I 171 C 0 s otoGar3.GL873542 22803807 46 + 22939663 AGCTCTGGATGTGCTGAGGCCTGAGAAACTCTGGGCTTG------GCAGGGC i otoGar3.GL873542 I 30 C 0 s dasNov3.JH569290 208886 27 - 397369 GGCCCTGGGC-------------------------CGAGACCCCAGCAGAGC i dasNov3.JH569290 C 0 I 2013 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56823613 1591 + 57149010 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=1051176.000000 s hg38.chr20_KI270870v1_alt 65482 131 + 183433 aggcagaggagccgtatgggcagaccagagGGGCTTCATAGGTGCCCCTGTATTGGGTGCCCTACTAAAGCAGAAACCAGTGCCAGCCTAGACAGCGATGACC------------------------AGCAGCCTGTGACCTCTGGAGCCCGGGA---- s panTro5.chr20 66390281 131 + 66533130 aggcagaggagccgtatgggcagagcagagGGGCTTCATAGGTGCCCCTGTATTGGGTGCCCTACTAAAGCAGAAACCAGTGCCAGCCTAGACAGCGATGACC------------------------AGCAGCCTGTGACCTCTGGAGCCCGAGA---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070849 131 + 62195757 aggcagaggagccgtatgggcagaccagagGGGCTTCATAGGTGCCCCTGTATTGGGTGCCCTACTAAAGCAGAAACCAGTGCCAGCCTAGACAGCGATGACC------------------------AGCAGCCTGTGACCTATGGAGCCCGAGA---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 455919 131 - 578057 AGGCAGAGGAGCCGTATGGGCAGACCAGAGGGGCTTCATAGGTGCCCCTGTATTGGGTGCCCTACTAAAGCAGAAACCAGTGCCAGCCTAGACAGCGATGACC------------------------AGCAGCCTGTGACCTCTGGAGCCCAGGA---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109982942 130 - 110113093 AGGCAGAGGAGCCGTATGGGCAGACCAGA-GGGCTTCACAGGTGCACCTGCATTGAGTGCCCTACTAAAGCAGGAACCAGTGCCAGCCTAGACAGTGATGACC------------------------AGCAGCCTGTGACCTCTGGAGCCTGGGA---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711464 131 - 92844088 AAGCAGAGGAGCCGTATGGGCAGACCAGAGGGGCTTCAGAGGTGCACATGTATTGGGGGGCCTACTAAAGCAGAAACCAGTACCAGCCCAGACAGCGATGACC------------------------AGCAGCCTGTGACCTCTGGAGCCCGGGG---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96378972 131 + 96509753 AAGCAGAGGAGCCGTATGGGCAGACCAGAGGGGCTTCAGAGGTGCACATGTACTGGGGGGCCTACTAAAGCAGAAACCAGTACCAGCCCAGACAGCGATGACC------------------------AGCAGCTTGTGACCTCTGGAGCCCGGGG---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849297 131 - 16982598 AAGCAGAGGAGCCGTATGGGCAGACCAGAGGGGCTTCAGAGCTGCACATGTATTGGGGGGCCTACTAAAGCAGAAACCAGTACCAGCCCAGACAGCGATGACC------------------------AGCAGCCTGTGACCTCTGGAGCCCGGGG---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651304 131 - 3785965 AGGCAGAGGAGCCGTATGGGCAGACCAGAGGGGCTTCAGAGGTGCACATGTATTGGGGGGCCTACTAAAGCAGAAACCAGTACCAGCCCAGACAGCGATGACC------------------------AGCAGCCTGTGACCTCTGGAGCCTGGGG---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272652 129 - 90373283 AGGCAGAGGAACTGTATGGGCAGACCAGAGGAGCTTCAGAGGTGCACATGTATTGGGGGGCCT--AAAAGCAGAAACCAGTACCAGCCCAGACAGTGATGACC------------------------AGCAGCCTGTGACCTCTGGAGCCCGGGG---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36244 131 - 179258 AGGCAGAGGAGCCGTATGGGCAGACCAGAGGGGCTTCAGAGGTGCACATGTATTGGGGGGCCTTCTAAAGCAGAAACCAGTACCAGCCCAGACAGGGATGACC------------------------AGCAGCCTGTGACCTCTGGAGCCTGGGG---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5523017 130 - 5823884 AGGCAGAGGAGCCGTATGGGCAGACCAGAGGGGCTTCAGAGGTGCACATGTATTGGGGGCCCTACTAAAGCAGAAACCAGTACCAGCCC-GACAGCGATGACC------------------------AGCAGCCTGTGACCTCTGGAGTCTGGGA---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4007 154 + 372756 AGGTAGAGGAGCCATAT-GGCAGACCAGAGGGGCTTCATGGGTGCACATGTATTGAGTTTATAACTAAAGCAGAAACCAATGCCAGCCCAGACAGCGATGGCCCGTAGCCACAAGCTTGGCTATGTGGGCAGCCCGTGACCTCTGGAGCCCGGGA---- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1111339 148 + 1231380 AGGCAGAGGAGCCATAT-GGCAGACCAGAGGGGCTTCATGGGTGCACATGTATTGAGTGCATAACTAAAGCAGAA------GCCAGCCCAGACAGCGATGGCCAGCAGCCACAAGCTTGGCTATGTGGGCAGCCCGTGACCTCTGGAGCCCGGGA---- i cebCap1.NW_016107870v1 C 0 I 47 s aotNan1.NW_018500483v1 2641320 153 + 11732439 AGG-AGAGGAGCCATAT-GGCAGACCCGAGGGGCTTCATGGGTGCACATGTGTTGAGTGCGTAACTAAAGCAGAAACCAGTGCCAGCCCAGACAGCGATGGCCGGCAGCCACGAGCTCCGCTATGTGAGCAGCCCGTGACCTCTGGAGCCCGGGA---- i aotNan1.NW_018500483v1 C 0 I 36 s otoGar3.GL873542 22803853 99 + 22939663 TGGAAGGGGAGTCA-GTGGGTAGCCCAAAGGGGCTTCCTGGGTGCAC----------------------------ACTGGCGGTGCCCTAACCAGCAACCACA------------------------A-------GTGATCTCTGGAGCCCAACAGGCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56823613 1591 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=78373.000000 s hg38.chr20_KI270870v1_alt 65613 13 + 183433 TGTGTCCGGA-----------------------CAT s panTro5.chr20 66390412 13 + 66533130 TGTGTCCGGA-----------------------CAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070980 13 + 62195757 TGTGTCCGGA-----------------------CAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456050 13 - 578057 TGTGTCCGGA-----------------------CAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983072 36 - 110113093 TGTGTCCAGAAGGCAGGACACCTGCTCTGGCTCCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711595 36 - 92844088 TGTGTCCAGCAGGCGGGACCCCTGCTCTGGCTCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96379103 36 + 96509753 TGTGTCCAGCAGGCGGGACCCCTGCTCTGGCTCAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849428 36 - 16982598 TGTGTCCAGCAGGCGGGACCCCTGCTCTGGCTCAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651435 36 - 3785965 TGTGTCCAGCAGGCGGGACCCCTGCTCTGGCTCAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272781 36 - 90373283 TGTGTCCAGCAGGCGGGACCCCTGCTCTGGCTCAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36375 36 - 179258 TGTGTCCAGCAGGCGGGACCCCTGCTCTGGCTCAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5523147 36 - 5823884 TGTGTCCAGCAGGCAGGACCCCTGCTCTGGCTCAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4161 36 + 372756 CAGATCCAGCAGGCAGGACCCCAGGTCTGGGTCAGC i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22803952 12 + 22939663 --------------GGTCTCCCTACT---------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56823613 1591 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e saiBol1.JH378156 16243114 0 + 16356641 C e cebCap1.NW_016107870v1 1111487 47 + 1231380 I e aotNan1.NW_018500483v1 2641473 36 + 11732439 I a score=53302.000000 s hg38.chr20_KI270870v1_alt 65626 9 + 183433 ----------ATCACGTCA s panTro5.chr20 66390425 9 + 66533130 ----------ATCACGTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62070993 9 + 62195757 ----------ATCACGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456063 9 - 578057 ----------CTCATGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983108 9 - 110113093 ----------ATGACTTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711631 9 - 92844088 ----------ATCACTCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96379139 9 + 96509753 ----------ATCACTCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849464 9 - 16982598 ----------ATCACTCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651471 9 - 3785965 ----------ATCACTCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272817 9 - 90373283 ----------ATCACTCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36411 9 - 179258 ----------ATCACTCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5523183 9 - 5823884 ----------ATCACTGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4197 9 + 372756 ----------ATCACTTCA i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2641509 9 + 11732439 ----------ATCACTTCA i aotNan1.NW_018500483v1 I 36 C 0 s otoGar3.GL873542 22803964 19 + 22939663 ATGATGATTGCTTGCTTCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56823613 1591 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e saiBol1.JH378156 16243114 0 + 16356641 C e cebCap1.NW_016107870v1 1111487 47 + 1231380 I a score=423345.000000 s hg38.chr20_KI270870v1_alt 65635 46 + 183433 GCCCAGGTGGCGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG s panTro5.chr20 66390434 46 + 66533130 GCCCAGGTGGTGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071002 46 + 62195757 GCCCAGGTGGCGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456072 46 - 578057 GCCCAGGTGGCGCTGAGT---GCCAGGAACCCAGCTATGGTGGGTGATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983117 46 - 110113093 GCCCAGGTGGTGCTGAGT---GCTGGGAACTCAGCTATGGTGGGTGATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711640 46 - 92844088 GTCCAGGTGGCGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96379148 46 + 96509753 GTCCAGGTGGCGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849473 46 - 16982598 GTCCAGGTGGTGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651480 46 - 3785965 GTCCAGGTGGCGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272826 46 - 90373283 GTCCAGGTGGCGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36420 46 - 179258 GTCCAGGTGGCGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5523192 46 - 5823884 GTCCAGGTGGCGCTGAGT---GCTGGGAACCCAGCTATGGTGGGTGATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4206 46 + 372756 GCCCATGTGGAGCTGAAT---GCTGGGAGCCCAGCTGTGGCGGGTGATA i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1111534 46 + 1231380 GCCCATGTGGCGCTGAGT---GCTGGGAGCCCAGCTGTGGTGGGTGATG i cebCap1.NW_016107870v1 I 47 C 0 s aotNan1.NW_018500483v1 2641518 46 + 11732439 GTCCATGTGGCACTGAGT---GCTGGGAGCCCAGCTGTGGTGGGTGATG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22803983 38 + 22939663 GCCCC--TTCTGCTGAGTCTCACCAGGCATCCAGCTGTGA--------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56823613 1591 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=175531.000000 s hg38.chr20_KI270870v1_alt 65681 27 + 183433 TCCAGACGG---CTTCCCTTGGGTCAGCTG s panTro5.chr20 66390480 27 + 66533130 TCCAGACGG---CTTCCCTTGGGTCAGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071048 27 + 62195757 TCCAGACGG---CTTCCCTTGGGTCAGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456118 27 - 578057 TCCAGACGG---CTTCCCTTGGGTCAGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983163 27 - 110113093 TCCAGAGGG---CTTCCCTTGGGTCAGCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711686 24 - 92844088 TCTGGTG------TTCCCTTGGGTCAGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96379194 24 + 96509753 TCTGGTG------TTCCCTTGGGTCAGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849519 24 - 16982598 TCTGGTG------TTCCCTTGGGTCAGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651526 24 - 3785965 TCTGGTG------TTCCCTTGGGTCAGCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272872 24 - 90373283 TCTGGTG------TTCCCTTGGGTCAGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36466 24 - 179258 TCTGGTG------TTCCCTTGGGTCAGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5523238 24 - 5823884 TCTGGTG------TTCCCTTGGGTCAGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4252 30 + 372756 TCCACAGGGCTTCTTCCCTTGTATCAGCTG i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1111580 30 + 1231380 CCCACAGGGCTTCTTCCCTTGTATCAGCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2641564 30 + 11732439 TCCACAGGGCTTCTTCCCTTGTATCAGCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56825204 27 + 57149010 TCCAGAGGG---CTTCCCTTGGGTCAGCTG i micMur3.chr18 I 1591 I 3279 s otoGar3.GL873542 22804021 25 + 22939663 --CAGGCAG---TGTCTCTTGGGTCAACTG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e dasNov3.JH569290 208913 2013 - 397369 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=1280765.000000 s hg38.chr20_KI270870v1_alt 65708 156 + 183433 CAGCCCGGCTTCCTGTTGAGGGCAGGGAGGTACAGTGGCTACACGCAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCAATAGCCAGAGCTGCATCCCACACACGGGGCTGGACTCTCCCG-GCTGTGGGGTGAGGCTGGGCCGCATGGCCTATGG s panTro5.chr20 66390507 156 + 66533130 CAGCCCGGCTTCCTGTCGAGGGCAGGGAGGTACAGTGGCTACACACAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCAATAGCCAGAGCCGCATCCCACACACGGGGCTGGACTCTCCCG-GCTGTGGGGTGAGGCTGGGCCGCATGGCCTATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071075 156 + 62195757 CAGCCCGGCTTCCTGTCGAGGGCAGGGAGGTACAGTGGCTACACACAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCAATAGCCAGAGCCGCATCCCACACACGGGGCTGGACTCTCCCG-GCTGTGGGGTGAGGCTGGGCCGCATGGCCTATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456145 156 - 578057 CAGCCCGGCTTCCTGTCGAGGGCAGGGAGGTACAGTGGCTACACGCGG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCAATAGCCAGAGCCGCATCCCACACACGGGGCTGGACTCTCCCG-GCTGTGGGGTGAGGCTGGGCCGCATGGCCTATGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983190 156 - 110113093 CAGCCCAGCTTCCCGTTGAGGGCAGGGAGGTACAGTGGTTACACGCAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCAATAGCCAGAGCCGCATCCCACACACGGGGCTGGACTCTCCCG-GCTGTGGAGTGAGGCTGGGCCGCATGGCCTATGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711710 156 - 92844088 TAGCCTGGCTTCCTGTTGAGGGCAGGGAGGTACAGTGCTGACACGCAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCGATAGCCAGAGCTGCATCCCACACATGGGACTGGACTCTCCCA-GTTGTGGGGTGAGGCTGGGATCCCTGGCCTATGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96379218 156 + 96509753 TAGCCTGGCTTCCTGTTGAGGGCAGGGAGGTACAGTGCTGACACGCAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCGATAGCCAGAGCTGCATCCCACACATGGGACTGGACTCTCCCA-GTTGTGGGGTGAGGCTGGGATGCCTGGCCTATGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849543 156 - 16982598 TAGCCTGGCTTCCTGTTGAGGGCAGGGAGGTACAGTGCTGACATGCAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCGATAGCCAGAGCTGCATCCCACACATGGGACTGGACTCTCCCA-GTTGTGGGGTGAGGCTGGGATGCCTGGCCTATGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651550 156 - 3785965 TAGCCTGGCTTCCTGTTGAGGGCAGGGAGGTACAGTGCTGACACGCAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCGATAGCCAGAGCTGCATCCCACACATGGGTCTGGACTCTCCCA-GTTGTGAGGTGAGGCTGGGATGCCTGGCCTATGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90272896 156 - 90373283 TAGCCTGGCTTCCTGTCGAGGGCAGGGAGGTACAGTGGTGACACGCAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCGATAGCCAGAGCTGCATCCCACACATGGGACTGGACTCTCCCA-GTTGTGGGGTGAGGCTGGGATGCCTGGCCTATGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36490 156 - 179258 TAGCCTGGCTTCCTGTTGAGGGCAGGGAGGTACAGTGCTGACACGCAG-CCCTGAGGGAGGCTGAGGTATTGCCACCTTCGATAGCCAGAGCTGCATCCCACACATGGGTCTGGACTCTCCCA-GTTGTGGGGTGAGGCTGGGATGCCTGGCCTATGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5523262 156 - 5823884 TAGCCTGGCTTCCTGTCGAGGGCAGGGAGGTACAGTGGTTACACGCAG-CCCTGAGGGAGGCTGAGGTGTTGCCGCCTTCAATAGCCAGAGCTGCATCCCACACACGGGACTGGACTCTCCCA-GTTGTGGGGTGAGGCTGAGAGGCCTGGCCTATGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4282 150 + 372756 CAGCCCAGCTTCCTATCGAGGTCAGGGAGGTACAGCAGTGACACCCAG-CCCTGAGGGAGGCTGAGGTGCTGCCACCTTCAATAACTAGAGCTGCATCCCACACACTGGGCTGGACTCTCCCAGGCTGTGGGGTGAAGCTGG-------GGGCTATGT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1111610 137 + 1231380 CAGCCCAGCTTCCTATTGCGGTCAGGGAGGTA-------------CAG-CCCTGAGGAAGGCTGAGGCACTGCCGCCTTCAATAACCAGAGCTGCGTCCCACACACGGGGCTGGACTCTCCCAGGCTGTGGGGTGAGGCTGG-------GGGCTACAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2641594 150 + 11732439 CAGCCCAGCTCCCTATCGAGGTCAGGGAGGTACAGCAGTGGCACCCAG-CCCTGAGGGAGGCTGAGGCACTGCCACCTTCAGTAGCCACAGCTGCGTCCCACACACGGGGCTGGACTCTCCCAGGCTGTGGGGTGAGGCTGG-------GGGCTATGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22804046 102 + 22939663 CAGC----CTCTATGTCCAG------------CCATGGCTGCCCAGAGCCCCCGAGTCAGGCTGAAGTGA---------------------------CCTAAACTCCAGTTTGGACTTTCCTAGGCTATGGGGCG-------------TGGTCTAAGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e saiBol1.JH378156 16243114 0 + 16356641 C a score=614056.000000 s hg38.chr20_KI270870v1_alt 65864 68 + 183433 CAAATGCCCCTCAAACCCTAATGCATCCACGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT s panTro5.chr20 66390663 68 + 66533130 CAAATGCCCCTCAAACCCTAATGCATCCACGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071231 68 + 62195757 CAAATGCCCCTCAAACCCTAATGCATCCACGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456301 68 - 578057 CAAATGCCCCCCAAACCCTAATGCATCCACGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983346 68 - 110113093 CAAATGCCCCTCAAACCCTAATGCATCCACGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711866 66 - 92844088 CAAATGCCCCTCAAACCCTAATGCATC--TGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96379374 66 + 96509753 CAAATGCCCCTCAAACCCTAATGCATC--TGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849699 66 - 16982598 CAAATGCCCCTCAAACCCTAATGCATC--TGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651706 66 - 3785965 CAAATGCCCCTCAAACCCTAATGCATC--TGGTCAACCTGGTGAGTTCTGACTCAGTCTGGCCAGGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90273052 66 - 90373283 CAAATGCCCCTCAAACCCTAATGCATC--TGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36646 66 - 179258 CAAATGCCCCTCAAACCCTAATGCATC--TGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5523418 66 - 5823884 CAAATGCCCCTCAAACCCTAATGCATC--TGGTCAACCTGGTGAGTTCTGACTCAGCCTGGCCAGGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4432 66 + 372756 CAAATGCCCGTCAAACCCTAATATGCCCATGAGCAACCTGGTGAGTTCGGA--CAGCCTGGCCAGGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16243114 66 + 16356641 CAAATGCCTGTCAAACCCTAACATGCCCATGAGCAACCTGGTGAGTTCTGA--CAGTCTGGCCAGATC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1111747 66 + 1231380 CAAATGCCCGTCAAACCCTAACATGCCCACAAGCAACCTGGTGAGCTCTGA--CCGTCTGGCCAGGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2641744 66 + 11732439 CAAATGCCCGTCAAACCCTAACACGCCCACAAGCAACCTGGTGAGTTCTGA--CAGCCTGGCCAGGTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22804148 48 + 22939663 CAAATGCTCATCAAA--CTTAGGTCTC--------------TAAGGACCGCCTCAGAGTAGCCA---- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47571957 204 + 47698779 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I a score=529818.000000 s hg38.chr20_KI270870v1_alt 65932 63 + 183433 CCCCTGGAGCTGGCCCCCTGAGCACG----TGTTGAGTTGGGGT----GGGGGAGCTGGAGGGCCTTTCTC s panTro5.chr20 66390731 63 + 66533130 CCCCTGGAGCTGGCCCCCTGAGCGCG----TGTTGAGTTGGGGT----GGAGGGGCTGGAGGGCCTTTCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071299 63 + 62195757 CCCCTGGAGCTGGCCCCCTGAGCGCG----TGTTGAGTTGGGGT----GGGGGGGCTGGAGGGCCTTTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456369 63 - 578057 CCCCTGGAGCTGGCCCCCTGAGCACG----TGTTGAGTTGGGGT----GGGGGGGCTGGAGGGCCTTTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983414 62 - 110113093 CCCCTGGTGCTGGCCCCCTGAGCGTG----TGTTGAGTTGGGGT----GG-GGGGCTGGAGGGCCTTTCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711932 63 - 92844088 CCCCTGGCGCTGGCCCCCTGAGTGTG----TGTTGAGTTGGGGT----GCGGGGGCTGAAGGGCCTTTCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96379440 63 + 96509753 CCCCTGGCGCTGGCCCCCTGAGTGTG----TGTTGAGTTGGGGT----GCGGGGGCTGAAGGGCCTTTCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849765 63 - 16982598 CCCCTGGCGCTGGCCCCCTGAGTGTG----TGTTGAGTTGGGGT----GCGGGGGCTGAAGGGCCTTTCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651772 63 - 3785965 CCCCTGGTGCTGGCCCCCTGAGTGTG----TGCTGAGTTGGGGT----GCAGGGGCTGAAGGGCCTTTCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90273118 63 - 90373283 CCCCTGGCGCTGGCCCCCTGAGTTTG----TGTTGAGTTGGGGT----GCGGGGGCTGAAGGGCCTTTCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36712 63 - 179258 CCCCTGGTGCTGGCCCCCTGAGTGTG----TGTTGAGTTGGGGT----GCGGGGGCTGAAGGGCCTTTCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5523484 63 - 5823884 CCCCTGGCGCTGGCCCCCTGAGTGTG----TGTTGAGTTGGGGT----GCGGGCGCTAAAGGGCCTTTCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4498 60 + 372756 CCACTGGCACTGGCCCCCTGAGCTTG----TGTTGAGCTGGGCT-------GGGTCTGGAGGGCCTGTCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16243180 60 + 16356641 CCACTGGCGCTGGCCTCCTGAGCACG----TGTTGAGCTGGGCT-------GGGGCTGGAGGGCCTTTCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1111813 60 + 1231380 CCACTGGCACGGGCCCCCTGAGCACC----TGTTGAGCTGGGCT-------GGGGCTGGAGGGCCATTCTC i cebCap1.NW_016107870v1 C 0 I 889 s aotNan1.NW_018500483v1 2641810 54 + 11732439 ------GCACTGGCCCCCTGAGCACA----TGTTGAGCTGGGCT-------GGGGCTGGAGGGCCTTTCTC i aotNan1.NW_018500483v1 C 0 I 331 s otoGar3.GL873542 22804196 20 + 22939663 --------------------------------TTCAGGAAGGGT----ATGGCAGC--------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47572161 69 + 47698779 CTCCTGG-GCTGGTC-CCTGGGCACAGGGCCGGCGGGGTGGGGCAGTGGAGGAAGCTCAGTGACCCCCCAC i canFam3.chr24 I 204 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I a score=49272.000000 s hg38.chr20_KI270870v1_alt 65995 8 + 183433 GAGCAGAA--------- s panTro5.chr20 66390794 8 + 66533130 GAGCAGAC--------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071362 8 + 62195757 GAGCAGAC--------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456432 8 - 578057 GAGCAGAC--------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983476 8 - 110113093 GAGCAGAC--------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92711995 8 - 92844088 GAGCAGAC--------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96379503 8 + 96509753 GAGCAGAC--------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849828 8 - 16982598 GAGCAGAC--------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651835 8 - 3785965 GAGCAGAC--------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90273181 8 - 90373283 GAGCAGAC--------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36775 8 - 179258 GAGCAGAC--------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5523547 8 - 5823884 GGGCAGAC--------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4558 7 + 372756 -AGCAAAC--------- i calJac3.chrUn_GL286459 C 0 I 60 s saiBol1.JH378156 16243240 7 + 16356641 -AGCAAAC--------- i saiBol1.JH378156 C 0 I 65 s canFam3.chr24 47572230 12 + 47698779 -----GGCCCCTCCGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e cebCap1.NW_016107870v1 1111873 889 + 1231380 I e aotNan1.NW_018500483v1 2641864 331 + 11732439 I e otoGar3.GL873542 22804216 0 + 22939663 C a score=4926367.000000 s hg38.chr20_KI270870v1_alt 66003 508 + 183433 CTTCAGAGAGGAGCGCTGG----------CCCT----------GTCTTTCCTGATTCTGAACGTGTCCAAGTCGTTTCATCACGTGATGGATTACCAGGCTGGTTGGTTCTACCGAAAGGCAGCAGCACAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAGTCTTAATTAACTCCATCCGAAGAACATATTTTCCCCAAGGGTAGGGAGTCCCAGTCAGGTGGAGCAAGTTGGAACTGCAAACTGCATTTGATAGCTGTGGTGTTGGGAGGAGCCC-CCTGGCTACTGCGAGG---GGTGTCTCCGTGAT------------GGG----------CGGGCAGATG---------------GATCAGCACC---------AACCCCTGCTGGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagaaaggtttggcaatctgccccaggtcacTTCCC----CTAAGCACAGACGTCCTTGTGGACGAGGAGAAGA-GGCAGAACTCACAGGGGAAAACCCTTCTTCCACACAGCATCTGCTGTGGCCAG s panTro5.chr20 66390802 508 + 66533130 CTTCAGAGAGGAGCGCTGG----------CCCT----------GTCTTTCCTGATTCTGAACGTGTCCAAGGCGTTTCATCACGTGATGGATTACCAGGCTGGTTGGTTCTACCGAAAGGCAGCAGCACAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAGTCTTAATTAACTCCATCCGAAGAACATATTTTCCCCAAGGGTAGGGAGTCCCAGTCAGGTGGAGCAAGTTGGAACTGCAAACTGCATTTGATAGCTGTGGTGTTGGGAGGAGCCC-CCTGGCTACTGCGAGG---GGTGTCTCCGTGAT------------GGG----------CGGGCAGATG---------------GATCAGCACC---------AACCCCTGCTGGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagaaaggtttggcaatctgccccaggtcacTTCCC----CTAAGCACAGACGTCCTTGTGGACGAGGAGAAGA-GGCAGAACTCAGAGGGGAAAACCCTTCTTCCACACAGCATCTGCTGTGGCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071370 508 + 62195757 CTTCAGAGAGGAGCGCTGG----------CCCT----------GTCTTTCCTGATTCTGAATGTGTCCAAGGCGTTTCATCACGTGATGGATTACCAGGCTGGTTGGTTCTACCGAAAGGCAGCAGCACAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAGTCTTAATTAACTCCATCCGAAGAACATATTTTCCCCAAGGGTAGGGAGTCCCAGTCAGGTGGAGCAAGTTGGAACTGCAAACTGCATTTGATAGCTGTGGTGTTGGGAGGAGCCC-CCTGGCTACTGCGAGG---GGTGTCTCCGTGAT------------GGG----------CGGGCAGATG---------------GATCAGCACC---------AACCCCTGCTGGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagaaaggtttggcaatctgccccaggtcacTTCCC----CTAAGCACAGACGTCCTTGTGGACGAGGAGAAGA-GGCAGAACTCAGAGGGGAAAACCCTTCTTCCACACAGCATCTGCTGTGGCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456440 506 - 578057 CTTCAGAGAGGAGCACTGG----------CCCT----------GTCTTTCCTGATTCTGAACATGTCCAAGTCATTTCATCACGTGATGGATTACCAGGCTGGTTGGTTCTACCGAAAGGCAGCAGCACAAG-TTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAGTCTTAATTAACTCCATCTGAAGAACATATTTTCCCCAAGGGTAGGGAGTCCCAGTCAGGTGGAGCAAGTTGGAACTGCAAACTGCATTTGATAGCTGTGGTGTTGGGAGGAGCCC-CCTGGCTACTGCGAGG---GGTGTCTCCGTGAT------------GGG----------CGGGCAGATG---------------GATCAGCACC---------AACCCCTGCCGGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagaaaggtttggcaatctgccccaggtcacTTCCC----CTAAGCACAGACGTCCTTGTGGACGAGGAGAAGA-GGCAGAACTCAGAGGGGAAAACCC-TCTTCCACACAGCATCTGCTGTGGCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983484 506 - 110113093 CTTCAGAGAGGAGCACTGG----------CTC------------TCTTTCCTGATTCTGAACATGTCCAGGTCGTTTCATCACGTGATGGATTACCAGGCTGGTTGGTTCTACCGAAAGGCAGCAGCACAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAGTCTTAATTAACTCCATCCAAAGAACGCATTTTCCCCAAGGGTAGGGAGTCCCAGTCAGGTGGAGCAAGTTGGAACTGCAAACCGCATTTGATAGCTGTGGTGTTAGGAGGGGCCC-CCTGGCTACTGCGAGG---GGTGTCTCCGTGAT------------GGG----------CGGGCGGATG---------------GATCAGCACC---------AACCCCTGCCGGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagaaaggtttggcagtctgccgcaggtcacTTCCC----TTAAGCACAGATGTCATTGTGGACGAGGAGAAGA-GGCAGAACTCAGAGGGGAAAACCACTCTTCCACACAGCATCTGCTGCGGCCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712003 511 - 92844088 CTTCAGAGAGGAGCGCTGG----------CTCT----------GTCTGTCCTGATTCTGAACATGTCCAAGTCGTTTCATCACGTAATGGATTACCAGGCTGGTTGGTTCTACCAAAAGACAGCAGCACAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAATCTTAATTAACTCCATCCGAAGAACGTATTTTCCCCAAGGGTAGGGAGTCCCAATCAGATGGAGCAAGTTGGGACTGCAAACCGCATTTGATAGCTGTGGTGTTGGGAGGGCCCA-CGTGGCTACTGCGAGG---GGTGTCTCCATGAT------------GGG----------CGGGCGGAGG---------------GATCAGCACC---------AACCCCTGCCAGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagagcagtttggcaacctgccccaggtcacTTCCCCTGTCTAAGCACAGACATCATTGTGGACGAGGAGAAGA-GGCAGAACTCAGAGGGG-AAACCACTCTTCCACACAGCTACTGCTGCTGccac i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96379511 510 + 96509753 CTTCAGAGAGGAGCGCTGG----------CTCT----------GTCTGTCCTGATTCTGAA-ATGTCCAAGTCGTTTCATCACGTAATGGATTACCAGGCTGGTTGGTTCTACCAAAAGACAGCAGCACAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAATCTTAATTAACTCCATCCGAAGAACGTATTTTCCCCAAGGGTAGGGAGTCCCAATCAGATGGAGCAAGTTGGGACTGCAAACCGCATTGGATAGCTGTGGTGTTGGGAGGGCCCA-CGTGGCTACTGCGAGG---GGTGTCTCCATGAT------------GGG----------CGGGCGGAGG---------------GATCAGCACC---------AACCCCTGCCAGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagagcagtttggcaacctgccccaggtcacTTTCCCTGTCTAAGCACAGACATCATTGTGGACGAGGAGAAGA-GGCAGAACTCAGAGGGG-AAACCACTCTTCCACACAGCTACTGCTGCTGCCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16849836 511 - 16982598 CTTCAGAGAGGAGCGCTGG----------CTCT----------GTCTGTCCTGATTCTGAACATGTCCAAGTCGTTTCATCACGTAATGGATTACCAGGCTGGTTGGTTCTACCAAAAGACAGCAGCACAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAATCTTAATTAACTCCATCCGAAGAACGTATTTTCCCCAAGGGTAGGGAGTCCCAATCAGATGGAGCAAGTTGGGACTGCAAACCGCATTTGATAGCTGTGGTGTTGGGAGGGCCCA-CATGGCTACTGCGAGG---GGTGTCTCCATGAT------------GGG----------CGGGCGGAGG---------------GATCAGCACC---------AACCCCTGCCAGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagagcagtttggcaacctgccccaggtcacTTCCCCTGTCTAAGCACAGACATCATTGTGGACGAGGAGAAGA-GGCAGAACTCAGAGGGG-AAACCACTCTTCCACACAGCTACTGCTGCTGccac i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3651843 511 - 3785965 CTTCAGAGAGGAGCGCTGG----------CTCT----------GTCTGTCCTGATTCTGAACATGTCCAAGTCGTTTCATCACGTAATGGATTACCAGGCTGGTTGGTTCTACCAAAAGGCAGCAGCACAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAATCTTAATTAACTCCATCCGAAGAACGTATTTTCCCCAAGGGTAGGGAGTCCCAATCAGATGGAGCAAGTTGGGACTGCAAACCGCATTTGATAGCTGTGGTGTTGGGAGGGCCCA-CGTGGCTACTGCGAGG---GGTGTCTCCATGAT------------GGG----------CGGGCGGAGG---------------GATCAGCACC---------AACCCCTGCCAGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagagcggtttggcaacctgccccaggtcacTTCCCCTGTCTAAGCACAGACATCATTGTGGACGAGGAGAAGA-GGCAGAACTCAGAGGGG-AAACCCCTCTTCCACACAGCTACTGCTGCTGccac i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90273189 509 - 90373283 CTTCAGAGAGGAGCGCTGG----------CTCT----------GTCTGTCCTGATTCTGAACATGTCCAAGTCGTTTCATCACGTAATGGATTACCAGGCTGGTTGGTTCTACCAAAAGGCAGCAGCATAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAATCTTAATTAACTCCATCCGAAGAACGTATTTTCCCCAAGGGTAGGGAGTCCCAATCCGATGGAGCAAGTTGGGACTGCAAACTGCATTTGATAGCTGTGGTGTTGGGAGGGCCCA-CGTGGCTACTGCGAGG---GGTGTCTCCATCAT------------GGG----------CGGGCGGAGG---------------GATCAGCACC---------AACCCCTGCCAGCACTTTCTgatatttctgttgccc------tcatttgataggtcgggaaactgagtcacagagcggtttggcaacctgccccaggtcacTTCCCCTGTCTAAGCACAGACATCATTGTGGAC---GAGAAGA-GGCAGAACTCAGAGGGGAAAACCACTCTTCCACACAGCAACTGCTGCTGCCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 36783 508 - 179258 CTTCAGAGAGGAGCGCTGG----------CTCT----------GTCTGTCCTGATTCTGAACATGTCCAAGTCGTTTCATCACGTAATGGATTACCAGGCTGGTTGGTTCTACCAAAAGGCAGCAGCACAAGCTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAATCTTAATTAACTCCATCCGAAGAACGTATTTTCCCCAAGGGTAGGGAGTCCCAATCAGATGGAGTAAGTTGGGACTGCAAACCGCATTTGATAGCTGTGGTGTTGGGAGGGCCCA-CGTGGCTACTGCGAGG---GGTGTCTCCATGAT------------GGG----------CGGGCGGAGG---------------GATCAGCACC---------AACCCCTGCCAGCACTTTCTgacatttctgttgccc------tcatttgatagatcgggaaactgagtcacagagcggtttggcaacctgccccaggtcacTTCCCCTGTCTAAGCACAGACATCATTGTGGAC---GAGAAGA-GGCAGAACTCAGAGGGG-AAACCCCTCTTCCACACAGCTACTGCTGCTGCCAC i manLeu1.NW_012101652v1 C 0 I 928 s colAng1.NW_012114444v1 5523555 508 - 5823884 CTTCAGAGAGGAGCACTGG----------CTCT----------GTCTCTCCTGATTCTGAACGTGTCCAAGTCGTTTCATCACGTAATGGATTACCAGGCTGGTTGGTTCTACCAAAAGGCAGCAGCACAAACTTTTCCTGGATTTCTCACCATTGTTCCTTTAAATAATCAATCTTAATTAATTCCATCCGAAGAACGTATTTTCCCCAAGGGT----AGTCCCAATCAGATGGAGCAAGTTGGGACTGCAAACCCCATTTGATAGCTGTGGTGTTGGGAGGGCCCA-CCTGGCTACTGCGAGG---GGTGTCTCCGTGAT------------GGG----------CGGGTGGAGG---------------GATCAGCACC---------AACCCCTGCCAGCACTTTCTgacatttctgttgcct------tcatttgatagatcaggaaactgagtcacagaaaggtttggcaacctgccccaggtcacTTCCCCTGTCTAAGCACAGACATCATTGTGGACAAAGAGAAGA-GGCAGAACTCAGAGGGGAAAACCATTCTTTCACACAGCAACTGCTGCTGCCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 4625 538 + 372756 CTTCTGAGGGGAGTGCTGGCCCTGTCCTGTTCTTCTGAGGGGAGTCCTTCCTGATTCTGAACATGTCTGAGCCATTTCATCACATGAAGGATTACCAGGTGGGTTGGTTCTACCGAAAGGAAGCAGCGCAAGCTTTTCCTGGACTTCCCACCATTGTTCCTGTAAATAATCAATCTTAATTAACTCCATCCAAAGAACATATTTTCCCCAAGGGCAGGGAGTCCCAGTCAGGTGGAGCCAGTTGGAACTACCAACCGCTTTAGGTAGCGATGGTGTTGGGAGGGGCCCTTGTGGCTGCTGCGGGT---GGTGTGTCCATGAC------------TGAGACACCCCACTGAG-AGATG---------------AATCAGCCTC---------AACCTCTGCAGGCACTTTCTgacatttctgttgccc------tcatttgataggtca-ggaactgagtcacagagaggtttggcaacctcccccaagtcacTCCCC-TGTCTAAGCACAGACGTCACTGTGGAT---GAGAAAATGGCAGAACTCAGTGGGGAAAGCCACTCTTCCACACAGCAGCAGCTGCAGCCAC i calJac3.chrUn_GL286459 I 60 C 0 s saiBol1.JH378156 16243312 510 + 16356641 -----GAGGGGAGCACTGG------CTGGCTCT----------GTCCTTCCTGATTCTGAACATGTCTGAGCCGTTTCATCACATGAAGGATTACCAGGCAGGTTAGTTCTACCGAAAGGAAGCAGCACAAGCTTTTCCTGGACTTCCCACCATTGTTCCTTTAAATAATCAATGTTAATTAACTCCATCAGAAGAACACGTTTTCCCCAAGTGCAGGGAGTCCCAGTCAGGTGGAGCCAGTTGGAACTACAAACCGCATTTGGTAGCGGTGGTGTTGGGAGGGGCCCTCATGGCTGCTGGGGGTGGGGGTGTCTCCATGAT------------GGG----------TGGGCAGATG---------------AATCAGCCTC---------AACCTCTGCAGGCACTTTCTgacatttctgttgccc------tcatttgataggtcagggaactgagt--cagagaggtttggcagcctcccccaggtcacTCCCC-TGTCTAAGCACAGACGTCACTGTGGAt---gagaaaatggcagaactcagtggggaaagccactcttccacacagcagcagctgcagccac i saiBol1.JH378156 I 65 C 0 s cebCap1.NW_016107870v1 1112762 508 + 1231380 CTTCTGAGGGGAGCGCTGC----------CTCT----------GTCCTTCCTGATTCTGAACATGTCTGAGCCATTTCATCACACGAAGGATTACCAGGCGGGTTGGTTCTACCGAAAGGAAGCAGCACAAGCTTTTTCTGGACTTCCCACCATTGTTCCTTTAAATAATCAATCTTAATTAACTCCATCCGAAGAACACGTTTTCCCCAAGGGCAGGGAGTCCCAGTCAGGTGGAGCCAGTTGGAACTACAAACTGCATTTGGTAGCGGTGGTGTTGGGAGGGGCCCTCGTGGCTGCTGGGG-----GGTGTCTCCATGAT------------GGG----------TGGGCAGATG---------------AATCAGCCTC---------AGCCTCTGCAGGCACTTTCTgacatttctgttgccc------tcatttgataggtcagggaactgagtcacagagaggtttggcagtctcccccaggtcactcccc-tgtttaagcacagaCATCACTGTGGAT---GAGAAAATGGCAGAACTCAGTGGGGAAAGCGACTCTTCCACACAGCAGCAGCTGCAGCCAC i cebCap1.NW_016107870v1 I 889 C 0 s aotNan1.NW_018500483v1 2642195 476 + 11732439 CTTCTGAGGGGAGCGCTGG----------CTCC----------GTCCTTCCTGATTCTGAACATGTCTGAGCCGTTTCATCACGTGAAGGATTACCAGGCGGGTTGGTTCTACCGAAAGGAAGCCGCACAAGCTTTTCCTGGACTTCCCACCATTGTTCCTTTAAATAATCAGTCTTAATTAACTCCATCCGAAGAACACGTTTTCCCCAAGGGCAGGGAGTCCCAGTCAGAT-----------------------------GGTAGCCGTGGTGTTGGGAGGGGCCCTCGTGGCTGCTGCGGG----GGTGTCTCCATGAT------------GGG----------TGGGCAGATG---------------GATCAGCCTC---------AGCCTCT----GCACTTTCTgacacttccgtcgcct------tcatttgataggtcagggaactgagtcacagagaggtttggcagcctcccccaggtcactcccc-tggctaagcacagaCATCACTGTAGAT---GAGAAAATGGCAGAACTCAGTGGGGAAAGCCACTCTTCCACACAGCAGCAGCTGCAGCCAC i aotNan1.NW_018500483v1 I 331 C 0 s otoGar3.GL873542 22804216 441 + 22939663 ---------------------------------------------CTTACCTGACTCTGCAAATGTCCAAGTGGTCCC-TCACGGCATGGATTCCAAAGCTGGTGGGTCCCACTGAAAAGACT--------GTGTTTCCTGGGC-TCTCTTCATT----CATTAACTAATCAATCTTAATAAACTCTTTCTCAAAGATGCCTTTTCCCCAAGGT--GGGGGCCCAACTCAGGT-GAGCACCTGGGAGCTGCAAG-GGCATCTGGCGGCTGTGCTG-TGGGAGTGGCCT-GCTGGGTGCAG--------GGTGTG--------------------GGG----------TGGG-----A---------------GACCATCCTA---------GGGGGCTGCC----CTGTCTGGCATCCCtgttgccc------tcatttgacaggtgaggaaaacaagtcagagaga-gtttggaaatccaccccaggtTCCTTTGGCTGTGTGAACTCAGATGCCACTGTTGCTGAGGGAAAGA-GACAGAACCCAGTGGGT-CAGCGCCTTGCAGCCTCAAGGTCTGGTTCTAT--- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47572242 466 + 47698779 CTTC---GGGGAATACAAG----------CTTT------------CTCACCTGACTCTGAACTTGTCCAAGTGGTCTTCTCATGGGATGGGTTACAAGGCT-GTTGGATCTCAGTAAAGGGATCAGCACCCGCGTTCCC--ACACTCCCCTCGTTGTGACCTTAAACAGCCAGTCTCAATGAACTACACCCAAAGAGCGTGTTTTCCCGAAATT---GGGGTCCTGAT----------------------------------GGTCTCCGTGGTGCCAGGAGGGAGCTTCCAGGCTTCCG----G---GGGGTCTCCGAGGTTGCAAGGCCACAGGC----------TGTGCAGGGGTCATTAGTCGGCAGTGACCAGCAGCCAGTGTGTGGGCCCCTCTGAGGACCCTGGGGAAGTCCCCCCCCCCCCCCGTCCCTTTGACAGACGAGGAAACGGAGTTGC----------------CCACCCGAGGT-----------------CACAGCCGTCAGTGCAGGTGAGGGGCCGG-GACAGGCCTGGGGGGCACAGCCCACTCTGC--CTCAGCAGCCCCCGTG----- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I a score=161837.000000 s hg38.chr20_KI270870v1_alt 66511 17 + 183433 CTGCCCCCACCTGCCCC s panTro5.chr20 66391310 17 + 66533130 CTGCCCCCACCTGCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071878 17 + 62195757 CTGCCCCCACCTGCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456946 17 - 578057 CTGCCCCCACCTGCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109983990 17 - 110113093 CTGCCCCCACCTGCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712514 17 - 92844088 ctgttcccacctgcccc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96380021 17 + 96509753 CTGTTCCCACCTGCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850347 17 - 16982598 ctgttcccacctgcccc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3652354 17 - 3785965 ctgttcccacctgtccc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90273698 17 - 90373283 CTGTTCCCACCTGCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 38219 17 - 179258 CTGCCCCCACCTGCCCC i manLeu1.NW_012101652v1 I 928 C 0 s colAng1.NW_012114444v1 5524063 17 - 5823884 CTGTTCCCAcctgcccc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 5163 4 + 372756 CTGt------------- i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16243822 17 + 16356641 ctgtctccacctgaccc i saiBol1.JH378156 C 0 I 8 s cebCap1.NW_016107870v1 1113270 17 + 1231380 CTGTCCCCACCTGCCCC i cebCap1.NW_016107870v1 C 0 I 36 s aotNan1.NW_018500483v1 2642671 17 + 11732439 CTGTCCCCACCTGTCCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22804657 17 + 22939663 TTTTCCCCCTCTGTCCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47572708 11 + 47698779 ------CTGCCTGCCGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I a score=94042.000000 s hg38.chr20_KI270870v1_alt 66528 9 + 183433 TGTCCCCAC s panTro5.chr20 66391327 9 + 66533130 TGTCCCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071895 9 + 62195757 TGTCCCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456963 9 - 578057 TGTCCCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984007 9 - 110113093 TGTCCCCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712531 9 - 92844088 tgtccccac i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96380038 9 + 96509753 TGTCCCCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850364 9 - 16982598 cgtccccac i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3652371 9 - 3785965 tgtccccac i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90273715 9 - 90373283 TGTCCCCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 38236 9 - 179258 TGTCCCCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5524080 9 - 5823884 tgtccccac i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 5169 9 + 372756 tgtccccac i calJac3.chrUn_GL286459 I 2 C 0 s saiBol1.JH378156 16243847 9 + 16356641 tgtccccac i saiBol1.JH378156 I 8 C 0 s aotNan1.NW_018500483v1 2642688 9 + 11732439 TCTTCCCAC i aotNan1.NW_018500483v1 C 0 I 96 s otoGar3.GL873542 22804674 8 + 22939663 -CTCCCTCC i otoGar3.GL873542 C 0 I 5 s canFam3.chr24 47572719 9 + 47698779 CGGCCCCGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e cebCap1.NW_016107870v1 1113287 36 + 1231380 I a score=182345.000000 s hg38.chr20_KI270870v1_alt 66537 29 + 183433 CTGTCCCTGTCCCCAACCTGCCCCACCTG s panTro5.chr20 66391336 29 + 66533130 CTCTCCCTGTCCCCAACCTGCCCCACCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071904 29 + 62195757 CTCTCCCTGTCCCCAACCTGCCCCACCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 456972 29 - 578057 CTGTCCCTGTCCCCAACCTGCCCCACCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984016 29 - 110113093 CTGTCCCTGTCCCTAACCTGCCCCACCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712540 28 - 92844088 ctgtccctgtcc-cgacctgtcccacctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96380047 28 + 96509753 CTGTCCCTGTCC-CGACCTGTCCCACCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850373 28 - 16982598 ctgtccctttcc-cgacctgtcccacctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3652380 29 - 3785965 ctgtccctgtcctcaacctgccccacctg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90273724 29 - 90373283 CTGTCCGTGTCCTCAACCTGCCCCACCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 38245 29 - 179258 CTGTCCCTGTCCCCAACCTGCCCCACCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5524089 29 - 5823884 ctgtccctgtccTCAACCTGCCCCACCTG i colAng1.NW_012114444v1 C 0 M 611 s calJac3.chrUn_GL286459 5178 27 + 372756 ctgtccctcttccca--cttgcccaactg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16243856 27 + 16356641 ctgtCCTTCTTCCCA--CTTGCCCATCTG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22804687 26 + 22939663 ---TCTCCTCCATCCCCCCGCCCCGACTG i otoGar3.GL873542 I 5 I 1 s canFam3.chr24 47572728 21 + 47698779 --------GGCCTCGGCTCTGCCCACCTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e cebCap1.NW_016107870v1 1113287 36 + 1231380 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I a score=98061.000000 s hg38.chr20_KI270870v1_alt 66566 34 + 183433 TCCCCGTC----------CCCACCTGCTCCTGTCCCCACCTTT---------------C- s panTro5.chr20 66391365 34 + 66533130 TCCCCGTC----------CCCACCCGCTCCTGTCCCCACCTTT---------------C- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071933 34 + 62195757 TCCCCGTC----------CCCACCCGCTCCTGTCCCCACCTTT---------------C- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457001 34 - 578057 TCCCCATC----------CCCACCTGCTCCTGTCCCCACCTGT---------------C- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984045 9 - 110113093 TCCCCGTC--------------------------------------------------C- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712568 34 - 92844088 tccctgtcctcaacctgccccacctgcccctgtc-------------------------- i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96380075 44 + 96509753 TCCCTGTCCTCAACCTGCCCCACCTGTCCCTGTCCCCACCTGT---------------C- i macFas5.chr10 C 0 I 66 s macNem1.NW_012014244v1 16850401 44 - 16982598 tccctgtcctcaacctgtcccacctgtccctgtccccacctgt---------------c- i macNem1.NW_012014244v1 C 0 I 17 s cerAty1.NW_012001373v1 3652409 34 - 3785965 tccctgtc----------cccacctgtccctgtccccacctgt---------------c- i cerAty1.NW_012001373v1 C 0 I 868 s chlSab2.chr2 90273753 33 - 90373283 TCCCTGTC----------CCCACCTG-CCCCACCTCTCCCTGT---------------C- i chlSab2.chr2 C 0 I 10 s manLeu1.NW_012101652v1 38274 34 - 179258 TTCCTGTC----------CCCACCTGTCCCTATCCCCACCTGT---------------C- i manLeu1.NW_012101652v1 C 0 I 7 s calJac3.chrUn_GL286459 5205 33 + 372756 cccttgtc----------tccacctg-ccccgtccccacctgc---------------c- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16243883 48 + 16356641 CCCTTGTC----------TCCAcctg-ccctgtccccacctgccctgtccccacctgtc- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22804714 34 + 22939663 TCTTCTAC----------ACCACCATGTTGGCTCCCCAGGTTT---------------C- i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47572749 35 + 47698779 CCCACACC----------TTCATCGGCTCTCAGCACCACCTGT---------------GC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e cebCap1.NW_016107870v1 1113287 36 + 1231380 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I a score=93971.000000 s hg38.chr20_KI270870v1_alt 66600 19 + 183433 CCATCTGCCcc------tgtc--------ccca s panTro5.chr20 66391399 19 + 66533130 CCATCTGCCCC------TGTC--------CCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071967 19 + 62195757 CCATCTGCCCC------TGTC--------CCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457035 19 - 578057 CCATCTGCCCC------TGTC--------CCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984054 19 - 110113093 CCATCTGCTCC------TGTC--------CCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712603 15 - 92844088 ccacctgtccc------tgtc------------ i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96380185 27 + 96509753 CCACCTGTCCC------TGTCCCCACCTGCCCA i macFas5.chr10 I 66 C 0 s macNem1.NW_012014244v1 16850462 19 - 16982598 ccacctgtccc------tgtc--------ctca i macNem1.NW_012014244v1 I 17 C 0 s cerAty1.NW_012001373v1 3653311 19 - 3785965 CCACCTGCCCC------TGTC--------CCCA i cerAty1.NW_012001373v1 I 868 I 17 s chlSab2.chr2 90273796 19 - 90373283 CCACCTGCCCC------TGTC--------CCCA i chlSab2.chr2 I 10 I 5 s manLeu1.NW_012101652v1 38315 19 - 179258 CCACCTGCCCC------TGTC--------CCCA i manLeu1.NW_012101652v1 I 7 I 17 s calJac3.chrUn_GL286459 5238 19 + 372756 ccacctgccct------tcac--------ccca i calJac3.chrUn_GL286459 C 0 I 4 s saiBol1.JH378156 16243931 19 + 16356641 ccacctgcctt------tcac--------ccca i saiBol1.JH378156 C 0 I 5 s otoGar3.GL873542 22804748 14 + 22939663 CCTCCTGCTCC------CTT------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47572784 25 + 47698779 CCAGATGCCTCACCGTGTGCT--------TCTA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e cebCap1.NW_016107870v1 1113287 36 + 1231380 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I a score=16500.000000 s hg38.chr20_KI270870v1_alt 66619 15 + 183433 tcctgtcccc--acctg s panTro5.chr20 66391418 15 + 66533130 TCCTGTCCCC--ATCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62071986 15 + 62195757 TCCTGTCCCC--ATCTG i panPan2.chr20 C 0 M 540 s gorGor5.CYUI01015848v1 457054 15 - 578057 TCCTGTCCCC--ACCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984073 6 - 110113093 TCCTGT----------- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96380212 5 + 96509753 ------------ACCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850481 5 - 16982598 ------------acctg i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90273820 16 - 90373283 CCCTGTCCTC-AACCTG i chlSab2.chr2 I 5 C 0 s calJac3.chrUn_GL286459 5261 15 + 372756 ccccgtcccc--acctg i calJac3.chrUn_GL286459 I 4 I 7 s saiBol1.JH378156 16243955 15 + 16356641 ccctgtcccc--acctg i saiBol1.JH378156 I 5 I 7 s otoGar3.GL873542 22804762 13 + 22939663 --ATTTTCCC--CCATG i otoGar3.GL873542 C 0 I 2 s canFam3.chr24 47572809 17 + 47698779 GCCTGGTCTTGGTCCTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e manLeu1.NW_012101652v1 38334 17 - 179258 I e cebCap1.NW_016107870v1 1113287 36 + 1231380 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e rheMac8.chr10 92712618 0 - 92844088 C a score=32296.000000 s hg38.chr20_KI270870v1_alt 66634 36 + 183433 c-----------------cccacctg----------------cc-------------cc---acccat-ccctg-tgcccaacctgc---- s panTro5.chr20 66391433 39 + 66533130 C-----------------CCCACCTG----------------CC-------------CCGCAACCCACGCCCTG-TG-CCAACCTGC---- i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457069 36 - 578057 C-----------------CCCACTTG----------------CC-------------CC---ACCCAT-CCCTG-TGCCCAACCTGC---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984079 35 - 110113093 C-----------------CCCACCTG----------------CC-------------CC---ACCCAT-CCCTG-TGCCCAACCTG----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712618 34 - 92844088 ------------------cccacctg----------------cc-------------cc---acctct-ccctg-tcctc-acctac---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96380217 50 + 96509753 TCTATGTC----------CCCACCTGTCCCTGT---------CC-------------CC---ACCTGT-CCCTG-TCCTCAACCTGC---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850486 43 - 16982598 t-----------------cccacctgcccctgt---------cc-------------cc---acctgt-ccctg-tcctcaacctgc---- i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90273836 51 - 90373283 C-----------------CCCACCTGTCCCTGTCCCCACCTGCC-------------CC---ACCTCT-CCCTG-TCCTC-CCCTGC---- i chlSab2.chr2 C 0 C 0 s calJac3.chrUn_GL286459 5283 41 + 372756 c-----------------cccacctgtccctg----------tc-------------cc---gcccac-ccctc-tcccc-acctgc---- i calJac3.chrUn_GL286459 I 7 C 0 s saiBol1.JH378156 16243977 41 + 16356641 c-----------------tccatctgtccctg----------ta-------------tc---cacctg-ccctg-tctcc-acctac---- i saiBol1.JH378156 I 7 I 7 s otoGar3.GL873542 22804777 29 + 22939663 T-----------------CCTAACCC----------------CC-------------AC---ACTCAG-TTTTC-CCCTC----------- i otoGar3.GL873542 I 2 C 0 s canFam3.chr24 47572826 67 + 47698779 ----AGCCTTGGATGGAGCCCACGTC----------------CCGGGGACAACAGAGCT---GCCCGT-CCCCGCTGCCCACTCCGGCAAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e cebCap1.NW_016107870v1 1113287 36 + 1231380 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I a score=133114.000000 s hg38.chr20_KI270870v1_alt 66670 43 + 183433 c-ccacctgccc------------cTGTCCCCACCTGTTCCTGTCCCTA------CCTG-------CCC s panTro5.chr20 66391472 42 + 66533130 C-CCACCTGCCC------------CTGTCCCCACCT-TTCCTGTCCCTA------CCTG-------CCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457105 43 - 578057 C-CCACCTGCCC------------CTGTCCCCACCTGTTCCTGTCCCCA------CCTG-------CTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984114 43 - 110113093 C-CCACCTGCCC------------CTGTCCCCACTTGTTCCTGTCCCCA------TCTG-------CCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712652 44 - 92844088 t-ccacctgccc------------ctgcccccacctgtccctgtccccaa-----cctg-------tcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96380267 36 + 96509753 C-CCACCTGTCC------------CTGTCCCCACCTGTCCCTGTCCTCA-------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850529 45 - 16982598 ctccacctgccc------------ctgtccccacctgtccctgtcctcaa-----cctg-------ccc i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90273887 44 - 90373283 C-CCACCTGCCC------------CTGTCCCCACCTGTCCCTGTCCTCAA-----CCTG-------CCC i chlSab2.chr2 C 0 C 0 s calJac3.chrUn_GL286459 5324 39 + 372756 -----cctgtcc------------ccgtctccacctgtccctgtcccca------cctg-------cac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16244025 49 + 16356641 t-gcacctgccc------------ctctccccacctgtccctgt-ccca------cctgcccttcaccc i saiBol1.JH378156 I 7 C 0 s cebCap1.NW_016107870v1 1113323 43 + 1231380 C-CCATCTGCCC------------TTGTCTCCACCTGCCCCTGTCCCTA------CCTG-------CCC i cebCap1.NW_016107870v1 I 36 I 22 s otoGar3.GL873542 22804806 42 + 22939663 -TCCCTCTGATG------------GTTTCCCTTCCTG-CCTTGTCCTCT------TGTA-------CCC i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47572893 60 + 47698779 -TCCACC-GCTCGGTAGGGAAGCACCGTCCCCCCATGGCCCAGGCTACAGCCCTCCCAG-------CCC i canFam3.chr24 C 0 I 3 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I a score=68029.000000 s hg38.chr20_KI270870v1_alt 66713 30 + 183433 CACTTGTCCCTG-----T--CCTC-ACCTGCC-------CCACCT s panTro5.chr20 66391514 29 + 66533130 CACTTGT-CCTG-----T--CCTC-ACCTGCC-------CCACCA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457148 30 - 578057 CACTTGTCCCTG-----T--CCTC-ACCTGCC-------CCACCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984157 29 - 110113093 CACTTGTCCCTG-----T--CCTC-ACCTG-C-------CCACCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712696 21 - 92844088 cacctgtccctg-----t--cccc-----------------acct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96380303 30 + 96509753 -ACCTGTCCGTG-----T--CCCCAACCTGCC-------CCACCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850574 30 - 16982598 cacctgtccctg-----t--cccc-acctgcc-------ccacct i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90273931 30 - 90373283 CACCTGTCCCTG-----T--CCCC-ACCTGCC-------CCACCT i chlSab2.chr2 C 0 I 2150 s calJac3.chrUn_GL286459 5363 37 + 372756 catctgcccttg-----t--ctcc-acctgtccctatctccacct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16244074 37 + 16356641 cacctgtccctg-----t--cccc-acctctccgtgtcgccacct i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22804849 34 + 22939663 CACTAGGCTCTGAGCTTT--CCTC-TACTGCC-------CCTGT- i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47572956 32 + 47698779 CACAGACCCTCG-----TGGCCCG-ACCTGGG-------CCCTCT i canFam3.chr24 I 3 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e cebCap1.NW_016107870v1 1113366 22 + 1231380 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I a score=43972.000000 s hg38.chr20_KI270870v1_alt 66743 26 + 183433 ACCCCTGCCCCCACCTGCCCCTGTCC s panTro5.chr20 66391543 21 + 66533130 CCCCCTG---CCACCTG--CCTGTCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457178 25 - 578057 ACCCCTG-CCCCACCTGCCCCTGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984186 26 - 110113093 GCCCCTGTCCCCACCTGTTCCTGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92712717 26 - 92844088 gtccgtgtccccacctgtccctgtcc i rheMac8.chr10 C 0 I 9 s macFas5.chr10 96380333 26 + 96509753 GTCCCTATCCCCACCTGTCCCTGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850604 19 - 16982598 ctccctgtcctcaccta-------ct i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 5400 24 + 372756 gcccctctccccacctgcccc--tct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16244111 26 + 16356641 gctcccctccccacctgtccctgtcc i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22804883 25 + 22939663 ACACTTCTCTCCTCTTA-CCCTGTAC i otoGar3.GL873542 C 0 I 2 s canFam3.chr24 47572988 26 + 47698779 TCCCCTTGGACCACCTGCCTGTGCAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e cebCap1.NW_016107870v1 1113366 22 + 1231380 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I a score=-389.000000 s hg38.chr20_KI270870v1_alt 66769 16 + 183433 CTGCC----TATC--CTTGTCC---- s panTro5.chr20 66391564 17 + 66533130 CTGCC---GTATC--CTTGTCC---- i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457203 16 - 578057 CTGCC----TATC--CTTGTCC---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984212 18 - 110113093 CCATC----TGCCCACTTGTCC---- i nomLeu3.chr13 C 0 T 100 s macFas5.chr10 96380359 15 + 96509753 CCACC----TGTC--CCTGTC----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850623 15 - 16982598 ccacc----tgcc--cctgcc----- i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 5424 15 + 372756 ccacc----tgtc--cctgtc----- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16244137 15 + 16356641 ccacc----tgcc--cctgtc----- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22804910 18 + 22939663 TCACTAGGGTCAC--AGTGC------ i otoGar3.GL873542 I 2 C 0 s canFam3.chr24 47573014 15 + 47698779 --------TTGTC--CTCATT-GGCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e cebCap1.NW_016107870v1 1113366 22 + 1231380 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e rheMac8.chr10 92712743 9 - 92844088 I a score=910.000000 s hg38.chr20_KI270870v1_alt 66785 1 + 183433 T s panTro5.chr20 66391581 1 + 66533130 T i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457219 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s otoGar3.GL873542 22804928 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47573029 1 + 47698779 T i canFam3.chr24 C 0 I 297 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e saiBol1.JH378156 16244152 0 + 16356641 C e macNem1.NW_012014244v1 16850638 0 - 16982598 C e cebCap1.NW_016107870v1 1113366 22 + 1231380 I e calJac3.chrUn_GL286459 5439 0 + 372756 C e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984230 100 - 110113093 T e rheMac8.chr10 92712743 9 - 92844088 I e macFas5.chr10 96380374 0 + 96509753 C a score=600.000000 s hg38.chr20_KI270870v1_alt 66786 1 + 183433 G s panTro5.chr20 66391582 1 + 66533130 G i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457220 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s otoGar3.GL873542 22804929 1 + 22939663 G i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e saiBol1.JH378156 16244152 0 + 16356641 C e macNem1.NW_012014244v1 16850638 0 - 16982598 C e cebCap1.NW_016107870v1 1113366 22 + 1231380 I e calJac3.chrUn_GL286459 5439 0 + 372756 C e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984230 100 - 110113093 T e rheMac8.chr10 92712743 9 - 92844088 I e macFas5.chr10 96380374 0 + 96509753 C a score=20339.000000 s hg38.chr20_KI270870v1_alt 66787 18 + 183433 CCCACCTGTTC---------ATGTCCT s panTro5.chr20 66391583 17 + 66533130 CCCA-CTCTTC---------ATGTCCT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457221 18 - 578057 CCCACCTGTTC---------GTGTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984130 18 - 110113093 CCCACTTGTTC---------CTGTCCC i nomLeu3.chr13 T 100 C 0 s rheMac8.chr10 92712752 2 - 92844088 -------------------------cc i rheMac8.chr10 I 9 C 0 s macFas5.chr10 96380374 27 + 96509753 CCCACCTGCCCAACCTGTCTATGTCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850638 18 - 16982598 cccacctgccc---------ctgtccc i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 5439 18 + 372756 cccacctgtcc---------ctgtccc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16244152 18 + 16356641 cccacctgccc---------ctgtccc i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22804930 15 + 22939663 CTCACAGTTTT------------TCCC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e cebCap1.NW_016107870v1 1113366 22 + 1231380 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I a score=77678.000000 s hg38.chr20_KI270870v1_alt 66805 39 + 183433 CACCTG---------TTCCTGTCCCCCACCTGCCCCTGTCCTC-ACCTG s panTro5.chr20 66391600 38 + 66533130 CACCTG---------TTCCTG-CCCCCACCTGCCCCTGTCCTC-ACCTG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457239 39 - 578057 CACCTG---------TTCCTGTCCCCCACCTGCCCCTGTCCTC-ACCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109984148 31 - 110113093 CATCTG-----------------CCCCACTTGTCCCTGTCCTC-ACCTG i nomLeu3.chr13 C 0 I 2354 s rheMac8.chr10 92712754 39 - 92844088 cacctg---------cccctg-tccccacctgtccctgtcctcaacctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96380401 39 + 96509753 CACCTG---------TCCCTG-TCCCCACCTGTCCCTGTCCTCAACCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850656 39 - 16982598 cacctg---------cccctg-tccccacctgtccctgtccccaacctg i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 5457 28 + 372756 cacctg----------ccctc-tccccacctgtccct----------ct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16244170 28 + 16356641 cacctg---------tccctc-tccccacctgtccc-----------cg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113388 38 + 1231380 CACCTG---------TCCCTG-TCCCCACCTGTCCTTGTCCCC-ACCTA i cebCap1.NW_016107870v1 I 22 C 0 s otoGar3.GL873542 22804945 46 + 22939663 -TCCAGGGTAGAGGCTCCCTC-TTCAGTTCTGGCCCAGTTTCT-GCCTG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I a score=91249.000000 s hg38.chr20_KI270870v1_alt 66844 57 + 183433 --CCCCACCTGCTCCAT------------CCCAC-----------------CTGTCCC-TGT-----------CCCCACCTGTCTTTGTCTcc-a-----------------cctgcc s panTro5.chr20 66391638 49 + 66533130 --CC---------CCAT------------CCCA------------------CTGTCCCGTGT-----------CCCCACCTGTCTTTGTCTCCAA-----------------CCTGCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457278 57 - 578057 --CCCCACCTGCCCCAT------------CCCAC-----------------CTGTCCC-TGT-----------CCCCACCTGTCTTTGTCTcc-a-----------------cctgcc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92712793 52 - 92844088 --ccccacctgtccctgtc----------cccac-----------------ctg-------------------ccccacctctccctgtcctc-a-----------------cctgct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96380440 97 + 96509753 --CCCCACCTGCCCCTGTCCTCAACCTGTCCCAC-----------------CTGTCCG-TGTCCTCAACCTGCCCCCACCTGCCCCTGTCCCC-ACTTGTCCCTGTCCTCAACCTGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850695 79 - 16982598 --tcccacctgtcccTGTC----------CCCAC-----------------CTGTCCG-TGTCCTTAACCTG-CCCCACCTGCCCCTGTCCCC-A-------CTGTCCCCAACCTGTC i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 5485 59 + 372756 --ccccacctgcccctctc----------cccac-----------------ctgtccc-tgt-----------ccccacctgtccctgtctcc-a-----------------cctgtc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16244198 59 + 16356641 --tcccacctgcccttcac----------ctcac-----------------ctgtccc-tgt-----------ccccacctgtctctctcccc-a-----------------cctgtc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113426 59 + 1231380 --CCCCACCTGCCCCTGTC----------CCCAC-----------------CTGTCCC-TGT-----------CTCCACCTGTCCCTGTCTCC-A-----------------CCTGCC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22804991 75 + 22939663 AGCCTCAGTGGTCCAG-------------TCCACAGGGATGGCTTGGCTTGCTGAACT-GAT-----------TCCCATATGTACCTGCTTCC-T-----------------TCTGTC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I a score=8111.000000 s hg38.chr20_KI270870v1_alt 66901 13 + 183433 cca----------tccccacc-tg- s panTro5.chr20 66391687 14 + 66533130 CCA----------TCCCCACCTTG- i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457335 13 - 578057 cca----------tccccacc-tg- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92712845 23 - 92844088 ccacctgcccctgcccccacc-tg- i rheMac8.chr10 C 0 I 7 s macFas5.chr10 96380537 23 + 96509753 CCACCTGGCCCTGTCCCCACC-TG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850774 23 - 16982598 CCACCTGTCCCTGTCCCCACC-TG- i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 5544 14 + 372756 ---------cctgtccccacc-tt- i calJac3.chrUn_GL286459 C 0 I 7 s saiBol1.JH378156 16244257 13 + 16356641 ---------cctgt-cccacc-tg- i saiBol1.JH378156 C 0 I 7 s otoGar3.GL873542 22805066 13 + 22939663 -----------TCTTTCCAGG-AGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I a score=10395.000000 s hg38.chr20_KI270870v1_alt 66914 6 + 183433 ccccac s panTro5.chr20 66391701 6 + 66533130 CCCCCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457348 6 - 578057 ccccac i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96380560 6 + 96509753 CCCCAC i macFas5.chr10 C 0 C 0 s calJac3.chrUn_GL286459 5565 6 + 372756 ccccac i calJac3.chrUn_GL286459 I 7 C 0 s saiBol1.JH378156 16244277 6 + 16356641 ccccac i saiBol1.JH378156 I 7 C 0 s otoGar3.GL873542 22805079 6 + 22939663 TCCCAC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e macNem1.NW_012014244v1 16850797 0 - 16982598 C e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e rheMac8.chr10 92712868 7 - 92844088 I a score=18468.000000 s hg38.chr20_KI270870v1_alt 66920 16 + 183433 ctg-cccctgtcctc-ac s panTro5.chr20 66391707 17 + 66533130 ATGCCCCCTGTCCTC-AC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457354 16 - 578057 ctg-cccctgtcctc-ac i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96380566 16 + 96509753 CTC-TCCCTGTCCTC-AC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850797 14 - 16982598 ----TCCGTGTCCTTAAC i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 5571 16 + 372756 ctg-cccctgtcccc-ac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16244283 16 + 16356641 ctg-tccctgtcccc-ac i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181760529 1400 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e rheMac8.chr10 92712868 7 - 92844088 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=29150.000000 s hg38.chr20_KI270870v1_alt 66936 27 + 183433 ctg--tcccac-ctgcccctgtccccacct s panTro5.chr20 66391724 27 + 66533130 CTGCCTCCCAC-CTGCCCC-GT-CCCACCT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457370 27 - 578057 ctg--tcccac-ctgcccctgtccccacct i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96380582 27 + 96509753 CTA--CTCCAC-CTGCCCCTGCCCCCACCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850811 27 - 16982598 CTG--CCCCAC-CTGCCCCTGTCCCCACCT i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 5587 28 + 372756 ctg--tcccctcctgtccttgtccccacct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16244299 18 + 16356641 ctg--cccccc----------tccccACCT i saiBol1.JH378156 C 0 M 746 s mm10.chr2 181761929 28 + 182113224 CTG--TCCACCACGGCACCTGTAGCTGCCT i mm10.chr2 I 1400 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e rheMac8.chr10 92712868 7 - 92844088 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=63667.000000 s hg38.chr20_KI270870v1_alt 66963 218 + 183433 g-----------------cccaacctgtctgtgtcccccacctgcccctctggtccctg-ccaccacctg-------ccccacc-tacccct--ttcccctacctgccccacatgccccacctgtgtccc---ccacctgctc-cacctgccccacTTGT-CTGTGTCCCCCAC---------CTGC------CCC--------ACTTGTCTGTG-TCccccacctgct-------------------------------ccactggcccctgccaccacctg-----------------ccccacc------tacccc-tttccccgac s panTro5.chr20 66391751 259 + 66533130 G-----------------CCCAACCTGTCT-TGCTCCCCACCTGCCCCTC-GGTCCCTGCCCACCACCTG-------CCCCACCATACCCCTTATTCCCCTACCTG-CCCACATCCGCCGCCTGTGTCCCCCACCACCTGCTCTCACCTGCCCCACTTGTCCTGTGTCCCCCAC---------CTGCTTTACGCCC--------ACTTGTCTGTGCTCCCCCACCTGCCCCCCATTGTCTGTCTTCCCCGCACCTGACTGCCACTGGCCCTAGCCACACACTG-----------------CCCCACC------TACCC----TTCCCGAC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457397 209 - 578057 g-----------------cccaacctgTCTGTGTCCCCCAACTGCCCCTCTGTTCCCTG-CCACCACC-----------------TACCCCT--TTCccccacctgccccacatgccccacctgtgtccc---ccacctgctc-cacctgccccacTTGT-CTGTGTCCCCCAC---------CTGC------CCC--------ACTTGTCTGTG-TCCCCCACCTGCT-------------------------------CCACTGGCCCCTGCCACCACCTG-----------------CCCCACC------TACCCC-TTTCCCCGAC i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96380609 237 + 96509753 GCCCCTGT----------CCCCACCTGTCCGTGTCCCCAACCTGCCCCACCTGTTCCTG-TCCCCACCTGCCCCTATCCCCACC-TGTCTT---TGTCTCCACCTG-CCCCTAT-CCCCACCTGT--------CCCTGTCCTC-AACCTGCCCCACCTGT-CCCTGT-CCCCAC---------CTGT------CCCTGTCCTCAACCTGTCCGTG-TCCCCAACCTGCC-------------------------------CCACCTGTCCCTATCCCCACCTGTCCCTGT----------CCCCACC------TGTCCC-TGTCCCCAC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16850838 238 - 16982598 GTCCCTGTCCTCAACCTGCCCCACCTGGCCCTAT-CCCGACCTGCCCCACCTCTCCCTG-TCCTCACCTG-------CTCCACC-TGCCCC---TGCCCCCACCTG-CCCCTGT-CCCCACCTGT--------CCGTGTCCCC-AACCTGCCCCACCTGT-TCCTGT-CCCCAC---------CTGT------CCCTATCCCC-ACCTGTCTTTG-T----------CT-------------------------------CCACCTGCCCCTGTCCCCACCTGTCCCTGTCCTCAACCTGCCCCACC------TGTCCC-TGTCCCCAC- i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 5615 139 + 372756 -------------------------------------------gcccctc---------------------------tcccacc-tgccct---tgtccccacctg-cccctct-cctcacctgc--------cc-----ctc--------tccacctgt-ccctgt-ccccac---------ctgc------ccctcttccc-acctgtccctc-t----------cc-------------------------------tcacctgcccctct--------------------------ccccacc------tgtgcc-tctccccac- i calJac3.chrUn_GL286459 C 0 C 0 s mm10.chr2 181761957 213 + 182113224 ----------------TTCCCCACTTCTCTTACACTCACTTCTGCTCCAGTTTCCTCTA-AC---------------TATCAAC-TGCTCC---TGTTCCCCACTG-TCCCCCCATTTTACCTTTGCTCC---CCACTCCCTC---CCTGCTCCACTTCCCCTCCTTTTCCCACTTCTTATTGCTAC------CCA--------TTTTATCTCAG-T----------TC-------------------------------TCAATTTTCTCTCTTCTCGTTTG-----------------CCCTACTCCCTTGTATCCCAATTTCTCAC- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e cerAty1.NW_012001373v1 3653330 17 - 3785965 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e manLeu1.NW_012101652v1 38334 17 - 179258 I e saiBol1.JH378156 16244317 746 + 16356641 M e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e rheMac8.chr10 92712868 7 - 92844088 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=8764.000000 s hg38.chr20_KI270870v1_alt 67181 3 + 183433 ctg s panTro5.chr20 66392010 3 + 66533130 CTG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457606 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96380846 3 + 96509753 CTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851076 3 - 16982598 CTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653347 3 - 3785965 CTG i cerAty1.NW_012001373v1 I 17 C 0 s manLeu1.NW_012101652v1 38351 3 - 179258 CTG i manLeu1.NW_012101652v1 I 17 C 0 s calJac3.chrUn_GL286459 5754 3 + 372756 ctg i calJac3.chrUn_GL286459 C 0 I 7 s mm10.chr2 181762170 3 + 182113224 ATG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e saiBol1.JH378156 16244317 746 + 16356641 M e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e rheMac8.chr10 92712868 7 - 92844088 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=244279.000000 s hg38.chr20_KI270870v1_alt 67184 120 + 183433 ccccacctg--tccc--------tgtccccacctg-------ccccacctgccccT-GT-CCTCA----CCTGCCCAACCTGTCT-------GTGTCCCCCACCTGCCCCACTGGTCCCTGCCACCACCTGCCCCACCTG--A-CCCCGCCCC s panTro5.chr20 66392013 118 + 66533130 --CCACCTG-TTCCC--------TGTCCCCACCTG--------CCCACCTGCCCCTCGT-CCTCA----CCTGCCCAACCTGTCT-------GTGTCCCCCACCTGCCCCACTCTGGCCT--CACTACCTG-CCCACCTGACA-CCCCCCGCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457609 95 - 578057 --C----------------------------------------CCCACCTGCCCCT-GT-CCTCA----CCTGCCCAACCTGTCT-------GTGTCCCCCACCTGCCCCACTGGTCCCTGCCACCACCTGCCCCACCTG--A-CCCCGCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92712875 121 - 92844088 ccccacctg--tccc--------tgtccccacctg-------ccccacctgtcccT-GT-CCCCA----CCTACCCAACCTGTCT-------ATGTCCCCCACCTGCCCCACTGGTCCCTGCCACCACCTGCCCCAGCTG--ATCCCTGTCCC i rheMac8.chr10 I 7 C 0 s macFas5.chr10 96380849 128 + 96509753 CCCAACCTG--TCTA--------TGTCCCCACCTGTCCCTGTCCCCACCTGTCCCT-GT-CCCCA----CCTGCCCCACCTGTCT-------ATGTCCCCCACCTGCCCCACTGGTCCCTGCCACCACCTGCCCCACCTG--ATCCCTGTCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851079 122 - 16982598 CCCCACCTC--TCCC--------TGTCCTCACCTG-------CCCCACCTGTCCCT-GTCCCCCA----CCTGCCCAACCTGTCT-------ATGTCCCCCACCTGCCCCACTGGTCCCTGCCACCACCTGCCCCACCTG--ATCCCTGTCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653350 122 - 3785965 CCCCACCTC--TCCC--------TGTCCTCACCTG-------CCCCACCTGTCCCT-GTCCCCCA----CCTGCCCAACCTGTCT-------ATGTCCCCCACCTGCCCCACTGGTCCCTGCCACCACCTGCCCCACCTG--ATCCCTGTCCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38354 122 - 179258 CCCCACCTC--TCCC--------TGTCCTCACCTG-------CCCCACCTGTCCCT-GTCCCCCA----CCTGCCCAACCTGTCT-------ATGTCCCCCACCTGCCCCACTGGTCCCTGCCACCACCTGCCCCACCTG--ATCCCTGTCCC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 5764 107 + 372756 acctacctg--tccc--------tgtccccacctg-ccctctccccacctgtccct-ct--ccca----cctgccc-------------------tctcccactgccctc-----tccctactgtc-cctctcccACCTG--T-TCCTGTCCC i calJac3.chrUn_GL286459 I 7 M 714 s mm10.chr2 181762173 140 + 182113224 -CCCACGTGGCTCCCAACGCTTATGTCTCCTCTTG-------CCTCACATACCCAT-TA-CCTCAGATTCCTTCCTTCTCCCTCTACTCACCATGTCCCCCATTTCTTCCCAGGTTCTGATTTTCTCCCTGCCCTCTCTT--T-CTATGTGCC i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e saiBol1.JH378156 16244317 746 + 16356641 M e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=89274.000000 s hg38.chr20_KI270870v1_alt 67304 43 + 183433 TCTTCTA--CCTTCCTGACCCCATC-CCCTCCCCTCCCCCTACTTG- s panTro5.chr20 66392131 39 + 66533130 CCTTCTA---CTTCCTG--CCCATC-CCCTCCCCTCCCCCCACTT-- i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457704 42 - 578057 TCTTCTA--CCTTCCTGCCCCCATC-CCCTCCCCTCCCCC-ACTTG- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92712996 44 - 92844088 TCTTCTA--CCTTCCTGCCACCACCTCCCTCCCCTCCCCCCACTTG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96380977 44 + 96509753 TCTTCTA--CCTTCCTGCCACCACCTCCCTCCCCTCCCCCCACTTG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851201 44 - 16982598 TCTTCTA--CCTTCCTGCCACCACCTCCCTCCCCTCCCCCCATTTG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653472 44 - 3785965 TCTTCTA--CCTTCCTGCCACCACCTCCCTCCCCTCCCCCCACTTG- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38476 44 - 179258 TCTTCTA--CCTTCCTGCCACCACCTCCCTCCCCTCCCCCCACTTG- i manLeu1.NW_012101652v1 C 0 C 0 s mm10.chr2 181762313 43 + 182113224 --TTCTATTCTCTCCTGATCCCAC--CTCTCTTTTTCTCCTTCCTGT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e saiBol1.JH378156 16244317 746 + 16356641 M e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e calJac3.chrUn_GL286459 5871 714 + 372756 M e aotNan1.NW_018500483v1 2642697 96 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=46358.000000 s hg38.chr20_KI270870v1_alt 67347 19 + 183433 ---CTCCACCTGTCTCACC---ACT s panTro5.chr20 66392170 22 + 66533130 ---TGCCACCTGTCTCACCACGACC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457746 19 - 578057 ---TTCCACCTGTCTCACC---ACT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713040 19 - 92844088 ---TTCCACCTACCTCTCT---ACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381021 19 + 96509753 ---TTCCACCTACCTCTCT---ACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851245 19 - 16982598 ---TTCCACCTACCTCTCT---ACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653516 19 - 3785965 ---CTCCACCTGCCTCTCT---ACC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38520 19 - 179258 ---CTCCACCTGCCTCTCT---ACC i manLeu1.NW_012101652v1 C 0 C 0 s aotNan1.NW_018500483v1 2642793 19 + 11732439 ---CTCCACCTGTCTCCCC---ACC i aotNan1.NW_018500483v1 I 96 C 0 s mm10.chr2 181762356 22 + 182113224 CACTTCAACCAGTTTCAGA---ACT i mm10.chr2 C 0 I 588 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e saiBol1.JH378156 16244317 746 + 16356641 M e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e calJac3.chrUn_GL286459 5871 714 + 372756 M e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=-646.000000 s hg38.chr20_KI270870v1_alt 67366 1 + 183433 G s panTro5.chr20 66392192 1 + 66533130 C i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457765 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713059 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381040 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851264 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653535 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38539 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s aotNan1.NW_018500483v1 2642812 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e saiBol1.JH378156 16244317 746 + 16356641 M e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e calJac3.chrUn_GL286459 5871 714 + 372756 M e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=24210.000000 s hg38.chr20_KI270870v1_alt 67367 7 + 183433 CCATATG s panTro5.chr20 66392193 7 + 66533130 CCATATG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457766 7 - 578057 CCATATG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713060 7 - 92844088 CCATATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381041 7 + 96509753 CCATATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851265 7 - 16982598 CCATATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653536 7 - 3785965 CCATATG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38540 7 - 179258 CCATATG i manLeu1.NW_012101652v1 C 0 C 0 s saiBol1.JH378156 16245066 7 + 16356641 CCACCTG i saiBol1.JH378156 M 746 C 0 s aotNan1.NW_018500483v1 2642813 7 + 11732439 CCATTCG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e cebCap1.NW_016107870v1 1113485 0 + 1231380 C e calJac3.chrUn_GL286459 5871 714 + 372756 M e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=5500.000000 s hg38.chr20_KI270870v1_alt 67374 1 + 183433 C s panTro5.chr20 66392200 1 + 66533130 C i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457773 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713067 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381048 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851272 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653543 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38547 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s saiBol1.JH378156 16245073 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113485 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2642820 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panPan2.chr20 62072001 540 + 62195757 M e calJac3.chrUn_GL286459 5871 714 + 372756 M e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=69186.000000 s hg38.chr20_KI270870v1_alt 67375 14 + 183433 CCCTCCTGGCCCCA s panTro5.chr20 66392201 13 + 66533130 CCCTCCT-GCCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62072541 14 + 62195757 CCCTCCTGGCCCCA i panPan2.chr20 M 540 C 0 s gorGor5.CYUI01015848v1 457774 14 - 578057 CCCTCCTGGCCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713068 14 - 92844088 CCCTCCTGGCCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381049 14 + 96509753 CCCTCCTGGCCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851273 14 - 16982598 CCCTCCTGGCCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653544 14 - 3785965 CCCTCCTGGCCCCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38548 14 - 179258 CCCTCCTGGCCCCA i manLeu1.NW_012101652v1 C 0 M 255 s saiBol1.JH378156 16245074 11 + 16356641 Ccctct---ctcca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113486 14 + 1231380 CCCTCCTGGCCACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2642821 14 + 11732439 CCCTCCTGGCCACA i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e calJac3.chrUn_GL286459 5871 714 + 372756 M e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=187922.000000 s hg38.chr20_KI270870v1_alt 67389 52 + 183433 CCTGTCCTACCTGTCTCC-CCTGCCTCCAACCTGCCCCTCTTTTGCCCCCCAC s panTro5.chr20 66392214 48 + 66533130 CCTGTCCTACCTGTCTCCTCCTGC--TCACCCTGCCCCTCTTT---GCCCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62072555 52 + 62195757 CCTGTCCTACCTGTCTCC-CCTGCCTCCAACCTGCCCCTCTTTTGCCCCCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457788 52 - 578057 CCTGTCCTACCTGTCTCC-CCTGCCTCCAACCTGCCCCTCTTTTGCCCCCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713082 52 - 92844088 CCTGTCCCACCTGTCTCC-CCTGCCCCCAACCTGCCCCTCTTTTGCCCCCCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381063 52 + 96509753 CCTGTCCCACCTGTCTCC-CCTGCCCCCAACCTGCCCCTCTTTTGCCCCCCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851287 52 - 16982598 CCTGTCCCACCTGTCTCC-CCTGCCCCCAACCTGCCCCTCTTTTGCCCCCCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653558 52 - 3785965 CCTGTCCCACCTGTCTCC-CCTGCCCCCAACCTGCCCCTCTTTTGCCCCCCAC i cerAty1.NW_012001373v1 C 0 C 0 s saiBol1.JH378156 16245085 43 + 16356641 cctgtcctc--atcccca-cctgcc-----cctgtccctcatctaccttcc-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113500 50 + 1231380 CCTGTCCCA--TGTCTCC-CCTGCCCCCCACCTGCCCCTCTTTTGATCCCCAC i cebCap1.NW_016107870v1 C 0 I 70 s aotNan1.NW_018500483v1 2642835 50 + 11732439 CCTGTCCCA--TGTCTCC-CCTGCCCCCCACCTGCCcctcttttgctccccac i aotNan1.NW_018500483v1 C 0 I 8 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e manLeu1.NW_012101652v1 38562 255 - 179258 M e calJac3.chrUn_GL286459 5871 714 + 372756 M e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=20334.000000 s hg38.chr20_KI270870v1_alt 67441 18 + 183433 ATGTCCCC-CCTCCCCCCT s panTro5.chr20 66392262 17 + 66533130 ATGT-CCC-CCTCCCCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62072607 18 + 62195757 ATGTCCCC-CCTCCCCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457840 12 - 578057 ATGT-------CCCCCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713134 17 - 92844088 ATGTCCCC-CCTCCCCTG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381115 17 + 96509753 ATGTCCCC-CCTCCCCTG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851339 17 - 16982598 ATGTCCCC-CCTCCCCTG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653610 17 - 3785965 ATGTCCCC-CCTCCCCTG- i cerAty1.NW_012001373v1 C 0 C 0 s saiBol1.JH378156 16245128 17 + 16356641 -tacccccacctccctcc- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e colAng1.NW_012114444v1 5524118 611 - 5823884 M e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e manLeu1.NW_012101652v1 38562 255 - 179258 M e cebCap1.NW_016107870v1 1113550 70 + 1231380 I e calJac3.chrUn_GL286459 5871 714 + 372756 M e aotNan1.NW_018500483v1 2642885 8 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=272446.000000 s hg38.chr20_KI270870v1_alt 67459 78 + 183433 CCTACCTCCACCTGCCCCACCTGTCTCCCCACCCCTACCTGCCCCTCTTGGCC-------TCCCACTTGTCCCCCCTG-CACCCAC s panTro5.chr20 66392279 75 + 66533130 TCTACCTCCACCTG-CCCACCTGTCTCCGCACCCCTAACTGCCC--CTTGGCC-------TCCCACTTGCCCCCTAAG-CACCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62072625 78 + 62195757 CCTACCTCCACCTGCCCCACCTGTCTCCCCACCCCTACCTGCCCCTCTTGGCC-------TCCCACTTGTCCCCCCTG-CACCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457852 78 - 578057 CCTACCTCCACCTGCCCCACCTGTCTCCCCACCCCTACCTGCCCCTCTTGGCC-------TCCCACTTGTCCCCCCTG-CACCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713151 78 - 92844088 CCTACCTCCACCTGCCCCACCTATCTCCCCACCCCTACCTGCCCCTCCTGGCC-------TCCCACCTGTTCCGCCTG-CACCCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381132 78 + 96509753 CCTACCTCCACCTGCCCCACCTATCTCCCCACCCCTACCTGCCCCTCCTGGCC-------TCCCACCTGTTCCGCCTG-CACCCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851356 78 - 16982598 CCTACCTCCACCTGCCCCACCTATCTCCCCACCCCTACCTGCCCCTCCTGGCC-------TCCCACCTGTTCCGCCTG-CACCCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653627 78 - 3785965 CCTACCTCCACCTGCCCCACCTATCTCCCCACCCCTACCTGCCCCTCTTGGCC-------TCCCACCTGTTCCGCCTG-CACCCAC i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5524730 78 - 5823884 CCTACCTCCACCTGCCCCACCTGTCTCCCCACCCCTACCTGCCCCTCCTGACC-------TCCCACCTATCCCACCTG-CACCCAC i colAng1.NW_012114444v1 M 611 C 0 s saiBol1.JH378156 16245145 84 + 16356641 ccaacctccatgtgctccacctgtctccccacccctatttgcccctcctggccacacctgtccca--tgtctcccctgccccccac i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e manLeu1.NW_012101652v1 38562 255 - 179258 M e cebCap1.NW_016107870v1 1113550 70 + 1231380 I e calJac3.chrUn_GL286459 5871 714 + 372756 M e aotNan1.NW_018500483v1 2642885 8 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=27068.000000 s hg38.chr20_KI270870v1_alt 67537 6 + 183433 CTGCTT s panTro5.chr20 66392354 6 + 66533130 CTGCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62072703 6 + 62195757 CTGCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457930 6 - 578057 CTGCTT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713229 6 - 92844088 CTGctc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381210 6 + 96509753 CTGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851434 6 - 16982598 CTGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653705 6 - 3785965 CTGCTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38817 6 - 179258 CTGctc i manLeu1.NW_012101652v1 M 255 C 0 s colAng1.NW_012114444v1 5524808 6 - 5823884 CTGCTC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16245229 6 + 16356641 ctgccc i saiBol1.JH378156 C 0 I 12 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e cebCap1.NW_016107870v1 1113550 70 + 1231380 I e calJac3.chrUn_GL286459 5871 714 + 372756 M e aotNan1.NW_018500483v1 2642885 8 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=47494.000000 s hg38.chr20_KI270870v1_alt 67543 12 + 183433 CCTCCTGCTTCT s panTro5.chr20 66392360 10 + 66533130 CCTCCTGCTT-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62072709 10 + 62195757 CCTCCTGCTT-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457936 12 - 578057 CCTCCTGCTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713235 12 - 92844088 cttcctgctttc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381216 12 + 96509753 CTTCCTGCTTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851440 12 - 16982598 CTTCCTGCTTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653711 12 - 3785965 CTTCCTGCTTTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38823 12 - 179258 cttcctgctttc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5524814 12 - 5823884 CCTCCTGCTTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 6588 12 + 372756 ccacctgctccc i calJac3.chrUn_GL286459 M 714 C 0 s saiBol1.JH378156 16245247 12 + 16356641 ccacctgctccc i saiBol1.JH378156 I 12 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e cebCap1.NW_016107870v1 1113550 70 + 1231380 I e aotNan1.NW_018500483v1 2642885 8 + 11732439 I e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=405188.000000 s hg38.chr20_KI270870v1_alt 67555 71 + 183433 CCTGCACGC-TCACCAGCCTCTGAGCACCTTCA-CCCCTCGATGTTCTCTCCTCTAAACAAgatgactca-cca s panTro5.chr20 66392370 71 + 66533130 -CTGCACGCGTCACCAG-CTCTGAGCACATTCACCCCCTCAATGTTCTCTCCTCT-AACAAGATGACTCAGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62072719 71 + 62195757 -CTGCACGC-TCACCAGCCTCTGAGCACATTCACCCCCTCAATGTTCTCTCCTCTAAACAAgatgactca-cca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 457948 72 - 578057 CCTGCACGC-TCACCAGCCTCTGAGCACATTCACCCCCTCGATGTTCTCTCCTCTAAACAAGATGACTCA-CCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713247 72 - 92844088 cctgcacgc-tcaccagcctctgagcacattcaccccctcactgttctctcctctaaacaagatgactca-cca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381228 72 + 96509753 CCTGCACGC-TCACCAGCCTCTGAGCACATTCACCCCCTCACTGTTCTCTCCTCTAAACAAgatgactca-cca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851452 72 - 16982598 CCTGCACGC-TCACCAGCCTCTGAGCACATTCACCCCCTCACTGTTCTCTCCTCTAAACAAGATGACTCA-CCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653723 72 - 3785965 CCTGCACGC-TCACCAGCCTCTGAGCACATTCACCCCCTCACTGTTCTCTCCTCTAAACAAGATGACTCA-CCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38835 72 - 179258 cctgcacgc-tcaccagcctctgagcacattcaccccctcactgttctctcctctaaacaagatgactca-cca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5524826 72 - 5823884 CCTGCATGC-TCACCAGCCTCTGAGCACATTCACCCCCTCACTGTTCTCTCCTCTAAACAAgatgactca-ccg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 6600 62 + 372756 cctgtatgc-tcaccagcctcttagcacattcaccctctggctattctctcttctaaaca-----------cct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16245259 62 + 16356641 cCTGCATGT-TCACCAGCCTCTGAGCACATTCACCCCCTGGCTATTCTCTCTTCTAAACA-----------CCT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2642893 62 + 11732439 cctgcacgc-tcaccagcctctgagcacattcaccccctggctattctcttttctaaaca-----------cct i aotNan1.NW_018500483v1 I 8 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e cebCap1.NW_016107870v1 1113550 70 + 1231380 I e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=599512.000000 s hg38.chr20_KI270870v1_alt 67626 86 + 183433 tttatttccagcctaatctctgcccccagcct-cagcctccatactgtcacccttgttgacggtgtcacctggtgactaacag--gcgc s panTro5.chr20 66392441 85 + 66533130 TTTATTTCCAGCCTAATC-CTGCCCCGAGCTTACAGCCTCCGTACTGTCACCCTTGTTGACGGTGTCATCCTGTGACTAACAG--GCG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62072790 86 + 62195757 tttatttccagcctaatctctgccccgagcct-cagcctccgtactgtcacccttgttgacggtgtcacctggtgactaacag--gcgc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458020 86 - 578057 TTTATTTCCAGCCTAATCTCTGCCCCGAGCCT-CAGCCTCCGTACTGTCACCCTTGTTGACAGCGTCACCTGGTGACTAACAG--GCGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92713319 86 - 92844088 tttatttccagcccaatcgctgccctgagcct-cagcctccatactgacacccttgttgacagtgtcacctggtgactaacag--gcgc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381300 86 + 96509753 tttatttccagcctaatcgctgccctgagcct-cagcctccatactgacacccttgttgacagtgtcacctggtgactaacag--gcgc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851524 86 - 16982598 TTTATTTCCAGCCCAATCGCTGCCCTGAGCCT-CAGCCTCCATACTGACACTCTTGTTGACAGTGTCACCTGGTGACGAACAG--GCGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653795 86 - 3785965 TTTATTTCCAGCCCAATCGCTGCCCTAAGCCT-CAGCCTCCATACTGACACCCTTGTTGACAGTGTCACCTGGTGACTAACAG--GCGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38907 86 - 179258 tttatttccagcccaatcgctgccctgagcct-cagcctccatactgacacccttgttgacagtgtcacctggtgactaacag--gcgc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5524898 86 - 5823884 tttatttccagcccaatcgctgccgtgagcct-cagcctccatactgacacccttgttgacagtgtcacctggtgactaacag--gcgc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 6662 85 + 372756 tttatttccagcccagtctctgccctgagcct-cagcctctgtacggacacccttgttgacagcatca-ctggtgacgaacag--gcac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16245321 87 + 16356641 TTTATTTCCAGCCCAGTCTCTGCCCTGAGCCT-CAGCCTCTGTACCGACACCCTTGTTGACAGCGTCT-CTGGTGACAAACAGGCGCGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113620 85 + 1231380 TTTATTTCcagcccagtctctgccctgagcct-cagcctcTGTACCGACACCAGTGTTGACAGCGTCA-CTGGTGATGAACAG--GCGC i cebCap1.NW_016107870v1 I 70 C 0 s aotNan1.NW_018500483v1 2642955 85 + 11732439 tttatttccagcccagtctctgccctgagcct-cagcctctgtgccgacacccttgttgacagcgtca-ctgttgacgaacag--gcgc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e nomLeu3.chr13 109984179 2354 - 110113093 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=1829888.000000 s hg38.chr20_KI270870v1_alt 67712 264 + 183433 tcagacatcccagcagagccagcaactcccacaaatctgccct-ccttcagcgtctccctctcagggggtgctg-ccgcccacc-tcatggctctggccagccctggagtctcctgtggcctctctgtccctacca-catccagaccctcagcaaC---CCGATTCATTCCTGAGGGGGTGTCCCAACTCGAATGCAATTCGTCACT------------------------------TCTCTTGG-GACACCCTTT-ACCGTCTATTGCCGCCCAGTAGCACTCACCATAGACCTCactgaag s panTro5.chr20 66392526 262 + 66533130 -CAGAC-TCCCAGCCAGACCAGCAACTCCCACAAATCTGCCCTCCCTTCAGCGTCCTCCCTTCA--GGGTGCTGCCCGCCCACCTTCAT-GCTCTGGCCAGCCCTGGAGTCTCCTG-GGCCTC-CTGTCCCTACCATCATCCAGACCCTCAGCAACCCACCGATTCATTCCTGA-GGGGTGTCCCAACTCGAATGCAATTCGTCACT------------------------------TCTCTTGGTGACCCGCTTTAACCGTCTATTG-CACCCAGCTACACTCA-CATAGCCGTCACCG-AG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62072876 264 + 62195757 tcagacatcccagcagagccagcaactcccacaaatctgccct-ccttcagcgtctccctctcagggggtgctg-ccgcccacc-tcatggctctggccagccctggagtctcctgtggcctctctgtccctacca-catccagaccctcagcaaC---CCGATTCATTCCTGAGGGGGTGTCCCAACTCGAATGCAATTCGTCACT------------------------------TCTCTTGG-GACACCCTTT-ACCGTCTATTGCCACCCAGTAGCACTCACCATAGACCTCactgaag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458106 264 - 578057 TCAGACATCCCAGCAGAGCCAGCAGCTCCCACAAATCTGCCCT-CCTTCAGCATCTCCCTCTCAGGGGGTGCTG-CCGCCCACC-TCATGGCTCTGGCCAGCCCTGGAGTCTCCTGTGGCCTCTCTGTCCCTACCA-CATCCAGACCCTCAGCAAC---CCGATTCATTCCTGAGGGGGTGTCCCAACTCGAATGCAATTCGTCGCT------------------------------TCTCTTGG-GACACCCTTT-ACCGTCTATTGCCGCCCAGTAGCACTCACCATAGACCTCactgaag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109986533 264 - 110113093 TCAGACATCCCAGCAGAGCCAGCAActcccacaaatctgccct-ctttcagcgtctccctctcagggggtgctg-ccacacacc-tcatggctctggccagccctggagtctcatgtggcctctctgtctgtacca-catccagaccatcagcaaC---CCGATTCATTCCTGAGGGGGTGTCCCAACTCGATGCAAATTCGTCGCT------------------------------TCTCTTGG-GACACCCTTT-ACCGTCTATTGCCGCCCAGTAGCACTCGCCATAGGCCTCactgaag i nomLeu3.chr13 I 2354 C 0 s rheMac8.chr10 92713405 260 - 92844088 tcagacatcccagcagagccagcaactcccacaaatctgccct-tcttcggcttctccc--tcagggggtgctg-ccgctcacc-tcatggctctggtcagccctggagtctcctgtgg--tgtctgtcccaacct-cacccagaccctcagcaaC---CCGACTCATTCCTTGAGGGGTGTCCCAACTCAAGTGCAATTCGTTGCT------------------------------TCCCTTGG-GACACCCTTT-ACCATCTATTGCCACCCAGTAGTGCTCACCACAGGCCTCACCGAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381386 260 + 96509753 tcagacatcccagcagagccagcaactcccacgaatctgccct-tcttcggcttctccc--tcagggggtgctg-ccgctcacc-tcatggctctggtcagccctggagtctcctgtgg--tgtctgtcccaacct-cacccagaccctcagcaaC---CCGACTCATTCCTTGAGGGGTGTCCCAACTCAAGTGCAATTCGTTGCT------------------------------TCCCTTGG-GACACCCTTT-ACCATCTATTGCCGCCCAGTAGTGCTCACCACAGGCCTCACCGAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851610 260 - 16982598 ACAGACATCCCAGCAGAGCCAGCAACTCCCACAAATCTGCCCT-TCTTCGGCTTCTCCC--TCAGGGGGTGCTG-CTGCTCACC-TCATGGCTCTGGTCAGCCCTGGAGTCTCCTGTGG--TGTCTGTCCCAACCT-CACCCAGACCCTCAGCAAC---CCGACTCATTCCTTGAGGGGTGTCCCAACTCAAGTGCAATTCGTTGCT------------------------------TCCCTTGG-GACACCCTTT-ACCATCTATTGCCGCCCAGTAGTGCTCACCACAGGCCTCACCGAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3653881 259 - 3785965 TCAGACATCCCAGCAGAGCCAGCAACTCCCACAAATCTGCCCT-TCTTCGGCTTCTCCC--TCA-GGGGTGCTG-CCGCTCACC-TCATGGCTCTGGTCAGCCCTGGAGTCTCCTGTGG--TGTCTGTCCCAACCT-CACCCAGACCCTCAGCAAC---CCGACTCATTCCTTGAGGGGTGTCCCAACTCAAGTGCAATTCGTTGCT------------------------------TCCCTTGG-GGCACCCTTT-ACCATCTATTGCCGCCCAGTAGTGCTCACCACAGGCCTCATCGAAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 38993 260 - 179258 tcagacatcccagcagagccagcaactcccacaaatctgccct-tcttcggcttctccc--tcagggggtgctg-ccgctcacc-tcatggctctggtcagccctggagtctcctgtgg--tgtctgtcccaacct-cacccagaccctcagcaaC---CCGACTCATTCCTTGAGGGGTGTCCCAACTCAAGTGCAATTCGTTGCT------------------------------TCCCTTGG-GGCACCCTTT-ACCATCTATTGCCGCCCAGTAGTGCTCACCACAGGCCTCATCGAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5524984 250 - 5823884 tcagacatcccagcagagccagcaattcccacaaatctgccct-tcttcggcctctccc--tcagggggtgctg-ccactcacc-tcatggctctggtcagccctggagtctcctgtgg--tctctgtcccgacct-cacccagaccctcagcaaC---CCGACTCATTCCTTGAGGGGTGTCCCAATTCAAGTGCAATTCGTTGCT------------------------------TCCCTTGG-GACACCCTTT-ACCA----------CCCAGTAGCGCTCACCACAGGCCTCACCGAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 6747 291 + 372756 tcagacatcccagcagagccagcaactcccgtagatctgccct-ccttccgcctcaccctctcagggggtgcta-ctgcccagc-tgatggctctggccagccctagagtctcacgtggcctctgtgttcttagca-catccagaccctcagcagc---cgacttcatcct---gagcgtgtcccaccttgagcacagttcatcccctcccctgggacacccctgacctcatcgcctccccctgg-GACACCCCTG-ACCACCTATTGCTGCCCAGTAGCACTCACCAGAAGCCTCACCGAAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16245408 254 + 16356641 TCGGACATCCCAGCAGAGCCGGCAACTCCCGAAGATCTGCCCT-CCTTCCACCTCACCCTCTC-GGGGTTGCTG-CTGCCCACC-TGATGGCTCTGCCCAGCCCTAGAGTCTCACGTGGCCTCGGTGTTCTTAGCA-CATCCAGACCCTCAGCAGC---CAGATTCATCCT---GAGCGTGTCCCACCTTGAGCGCAATTC------------------------------------TGCCCTGG-GACGCCCCTG-ACCGTCTATTGCCACCCAGTAGCACTCACCAGAGGCCTCACTGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113705 260 + 1231380 TCAGACATCCCAGCAGAGCCGGCAACTCCCGTAGATCTGCCCT-CCTTCCGCTTCACCCTCTC-AGGGTTGCTG-CTGCCCACC-TGATGGCTCTGGCCAGCCCTAGAGTCTCACGTGGCCTCTGTGTTCTTAGCA-CATCCAGACCCTCAGCAGC---CGGATTCATCCT---GAGCGTGTCCCACCTCGAGCGCAACTCATTGCC------------------------------TGCCCTGG-GACACCCCTG-CCCGTCTGTTGCCGCCCAGTATCACTCACCAGAGGCCTCACTGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2643040 256 + 11732439 tcagacatcccagcagagccagcaactcccgtagatctgccct-ccttccgcctcaccctctc--ggggtgctg-ccgcccacc-tgatggctctggccagccctagagtctcacgtggcctctgtgttcttagca-catccagaccctcagcaac---cggattcatcct---gagcgtgtcccaccttaa---caattcatcgcc------------------------------tcccctgg-gacacccctg-accttctattgccgccCAGTAGCACTCACCAGAGGCCACactgaag i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e otoGar3.GL873542 22805085 0 + 22939663 C a score=54903.000000 s hg38.chr20_KI270870v1_alt 67976 6 + 183433 atgtaa s panTro5.chr20 66392788 6 + 66533130 ATGTAA i panTro5.chr20 C 0 I 7 s panPan2.chr20 62073140 6 + 62195757 atgtaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458370 6 - 578057 atataa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109986797 6 - 110113093 atgtaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92713665 6 - 92844088 ATGTaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381646 6 + 96509753 ATGTaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851870 6 - 16982598 ATGTaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654140 6 - 3785965 ATGTaa i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39253 6 - 179258 ATGTaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525234 6 - 5823884 ATGTaa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7038 6 + 372756 Acataa i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16245662 6 + 16356641 ACATAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113965 6 + 1231380 ACGTaa i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2643296 6 + 11732439 atgtaa i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22805085 6 + 22939663 ATGTAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I a score=158625.000000 s hg38.chr20_KI270870v1_alt 67982 21 + 183433 atgttaaacattttgctcttg- s panPan2.chr20 62073146 21 + 62195757 atgctaaacattttgctcttg- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458376 21 - 578057 atgttaaacattttgctcttg- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109986803 21 - 110113093 atgttaaacattttactcttg- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92713671 21 - 92844088 atgttaaacattttgctcttg- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381652 21 + 96509753 atgttaaacattttgctcttg- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851876 21 - 16982598 atgttaaacattttgctcttg- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654146 21 - 3785965 atgttaaacattttgctcttg- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39259 21 - 179258 atgttaaacattttgctcttg- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525240 21 - 5823884 atgttaaacattttgctcttg- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7044 21 + 372756 atgttacacactttgctcctg- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16245668 21 + 16356641 GCgctaaacattttgctcttg- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113971 21 + 1231380 atgctaaacattttgctcttg- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2643302 21 + 11732439 atgttaaacattttgctcttg- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22805091 19 + 22939663 ---ATCAGCCCTTTCCCTGTGT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I e panTro5.chr20 66392794 7 + 66533130 I a score=416155.000000 s hg38.chr20_KI270870v1_alt 68003 47 + 183433 gtcacccagctgggaggggccggtcaggg-gtcagtccagatctgcct s panTro5.chr20 66392801 43 + 66533130 GTCA-CCAGCTGGGAGAGCCCGGTCA-GG-GTCAGTCCAGA--CGCCT i panTro5.chr20 I 7 C 0 s panPan2.chr20 62073167 47 + 62195757 gtcacccagctgggaggggccggtcaggg-gtcagtccagatctgcct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458397 47 - 578057 gtcacccagctgggaggggccagtcaggg-gtcagtccagatctgcct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109986824 47 - 110113093 gtcacccagctgggaggggccggtcaggg-gtcattccagatctgcct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92713692 47 - 92844088 gccacccagctgggaggggccggtcaggg-gtcagtccagatctgcct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381673 47 + 96509753 gccacccagctgcgaggggccggtcaggg-gtcagtccagatctgcct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851897 47 - 16982598 gccacccagctgggaggggccggtcaggg-gtcagtccagatctgcct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654167 47 - 3785965 gccacccagctgggaggggccggtcaggg-gtcagtccagatctgcct i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39280 47 - 179258 gccacccagctgggaggggccggtcaggg-gtcagtccagatctgcct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525261 47 - 5823884 gccacccagctgggagggaccggtcaggg-gtcagtccagatctgcct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7065 47 + 372756 gtcacgcagctgggaggggccggtcaggg-ctcagtccagatctgcct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16245689 47 + 16356641 gtcatgcagctgggaggggccggtcagag-gtcaggccagacctgcct i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1113992 47 + 1231380 gtcacgcagctgggaggggccggtcaggg-gtcagtccagatctgcct i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2643323 47 + 11732439 gtcacgcagctgggaggggccggtcaggg-gtcagtccagatctgcct i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22805110 45 + 22939663 GCAACCCAGCTTGGGCTGAC---TCAGGGCCTCAGGGCTGATGTGGAC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e canFam3.chr24 47573030 297 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I a score=1016491.000000 s hg38.chr20_KI270870v1_alt 68050 155 + 183433 cc-----------tccaaagGTTTGA---ACCCTCCA--TACTCCGGGCCTC--CCCCTCAGTGCTGCCCTGGATGGGAGAGAC-TAG--CCTGGACTTGGCCACGTGTTG-GTAGAGG--TAA-GC-CA---GCATCACCTGGGCCTCC-ACCTGTCCCCTGCAGG-----------GACAGACACCTGCAGAAC s panTro5.chr20 66392844 156 + 66533130 CC-----------T-CAAAGGTTTGA---ACCCTCCA--TACTCCGGGCCTGCACCCCTCAGTGCTGCCCTGAGTCGGAGAGACTTAG--CATGGACTTGG-CGCATGTTGCGTAGAAGGCTAATGCACA---GCATCACCTGGGCCTCA-CCTTGT--CCTGCAGG-----------GACAG--ACCTCCAG-AC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073214 139 + 62195757 cc-----------tccaaagGTTTGA---ACCCTCCA--TACTCCGGGCCTC--CCCCTCAGTGCTGCCCTGGATGGGAGAGAC-TAG--CCTGGACTTGGCCACGTGTTG-GTAGAAG--TAA-GC-CA---GCATCACCTGGGCCTCC-ACCTGTCCCCTGCAGG---------------------------AC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458444 155 - 578057 cc-----------tccaaaggtttga---accctcca--tactccgggcct---cccctcAATGCTGCCCTGGATGGGAGAGAC-TAG--CCTGGACTTGGCCACGTGTTG-GTAGAAG--TAA-GC-CA---GCATCACCTGGGCCTCCAACCTGTCTGCTGCAGG-----------GACAGACACCTGCAGAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109986871 155 - 110113093 cc-----------tccaaagGTTTGA---ACCCTGCA--TACTCCGGGCCTC--CCCCTCAATGCTGCCCTGGATGGGAGAAAC-TAG--CCTGGACTTGGCCGCGCGTTG-GTAGAAA--TAA-GC-CA---GCATCACCTGGGCCTCC-ACCTGTCCCCTGCAGG-----------GACAGACACCTGCAGAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92713739 154 - 92844088 cc-----------tccaaagGTTTGA---ACCCTCCA--TACTTCAGGTCTC--CCCCTCAATGCTG-CCTGGATGGGAGAGAC-TAG--CCTGGACTTGGCCACGTGTTG-GGAGAAA--GAA-GC-CA---GCATCACCTGGGCCTCC-ACCTGTCCCCTGCAGG-----------GACAGACACCTGCAGCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381720 155 + 96509753 cc-----------tccaaagGTTTGA---ACCCTCCA--TACTTCAGGTCTC--CCCCTCAATGCTGCCCTGGATGGGAGAGAC-TAG--CCTGGACTTGGCCACGTGTTG-GGAGAAA--GAA-GC-CA---GCATCACCTGGGCCTCC-ACCTGTCCCCTGCAGG-----------GACAGACACCTGCAGCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16851944 155 - 16982598 cc-----------tccaaagGTTTGA---ACCCTCCA--TACTTCAGGTCTC--CCCCTCAATGCTGCCCTGGATGGGAGAGAC-TAG--CCTGGACTTGGCCACGTGTTG-GGAGAAA--GAA-GC-CA---GCATCACCTGGGCCTCC-ACCTGTCCCCTGCAGG-----------GACAGACACCTGCAGCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654214 155 - 3785965 cc-----------tccaaagGTTTGA---ACCCTCCA--TACTTCAGGTCTC--CCCCTCAATGCTGCCCTGGATGAGAGAGAC-TAG--CCTGGACTTGGCCACGTGTTG-GGAGAAA--GAA-GC-CA---GCATCACCTGGGCCTCC-ACCTGTCCCCTGCAGG-----------GACAGACACCTGCAGCAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39327 155 - 179258 cc-----------tccaaagGTTTGA---ACCCTCCA--TACTTCAGGTCTC--CCCCTCAATGCTGCCCTGGATGAGAGAGAC-TAG--CCTGGACTTGGCCACGTGTTG-GGAGAAA--GAA-GC-CA---GCATCACCTGGGCCTCC-ACCTGTCCCCTGCAGG-----------GACAGACACCTGCAGCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525308 155 - 5823884 cc-----------tccaaagGTTTGA---ACCCTCCA--TACTTCAGATCTC--CCCCTCAATGCTGCCCTGGATGGAAGAGAC-TAG--CCTGGACTTGGCCACGTGTTG-GGAGAAG--GAA-GC-CA---GCATCACCTGGGCCTCC-ACCTGTCCCCTGCAGG-----------GACAGACACCTGCAGCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7112 143 + 372756 cc-----------tccaaagATTCGA---ACCCACC----ATTCCCAGCCTC--CGTCTTAATGCTGCCCTGCATGGGGGTGAC-TG----CTGGACTTGGCCACATGATG-GGAAAAA--GAA-GC-CA---GCATCACCTGGGCCTCT-GCCAGTCCCC------------------ACAGACACCTGCAGCA- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16245736 143 + 16356641 cc-----------tccaaaggcttga---accctcc----actCCTGGCCCC--CGTCTCACTGCTGCCCTGGATGGGGGCGAC-TG----CTGGATTTGGCCACGTGACG-GGAAACA--GAA-GC-CA---GTGTCACCTGGGCCTCC-ACCAGTCCCC------------------ACAGACGTCTGCAGCA- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1114039 143 + 1231380 cc-----------tccaaaggcttga---accctcc----actcccaggctc--tgtctcactgCTGCCCTGGTTGGGAGTGAC-TG----CTGGACTTGGCCACGTGACG-GGAAACA--GAA-GC-CA---GCATCACCTGGGCCTCC-ACCGGTCCCC------------------ACAGACACCTGCAGCA- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2643370 143 + 11732439 cc-----------tccaaaggtttga---accctcc----actCCCGGCCTC--CGTCTCAATGCTGCCCTGAATGGGGGTGAC-TG----CTGGACTTGGCCACATGACG-GAAAAAA--GAA-GC-CA---GCATCACCTGGGCCTCC-ACCGGTCCCC------------------ACAGACACCTGCAGTA- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22805155 164 + 22939663 CCACAGTTTGCTTTCCAAAGCTATGAGAGGCCATCCAGGGACCCCTGACTTT--CCCA--GATGCAGCCCAGGGTGGGAGTCAC-TGG--TGTGGACTCAGACATATGATG-GGTTAGA--GAA-GC-CATAGGCCTCATCT-GGCCTCA-ACCTGTC-------AG-----------GGTAGACCCCAGCAGCAC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47573327 150 + 47698779 CC-----------TTCAGAGCCTGGA---CAGCCCCA-----CCCGGGCCTA--GCTCCCAGGCCGGCCTTGAATCTGTGATCA-CAGGCTCTTGCTGTGGCCTCA-GCTG----------CCA-CA-CA---GCA-CACCCAGGCCCCC-ACCTGTGAGGGGTAGAGCTGGGGATGTGATGGATGCCTC------ i canFam3.chr24 I 297 C 0 e proCoq1.NW_012150197v1 1821014 1673 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56825231 3279 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I a score=342590.000000 s hg38.chr20_KI270870v1_alt 68205 35 + 183433 CTGAGGACCAGGAGGTGAC-CCT-GAGCTGCCT----G-GGG- s panTro5.chr20 66393000 33 + 66533130 CTGAGAGCCAGGA-GTGA--CCT-GACTGCCCT----G-GGG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073353 35 + 62195757 CTGAGGACCAGGAGGTGAC-CCT-GAGCTGCCT----G-GGG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458599 35 - 578057 CTGAGGACCAGGAGGTGAC-CCT-GAGCTGCCT----G-GGG- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109987026 35 - 110113093 CTGAGGACCAGGAGGTGAC-CCT-GAGCTGCCC----A-GGG- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92713893 35 - 92844088 CTGAGGATGAGGAGGTGAC-CCT-GAGCTGCCT----G-GGG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381875 35 + 96509753 CTGAGGATGAGGAGGTGAC-CCT-GAGCTGCCT----G-GGG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852099 35 - 16982598 CTGAGGATGAGGAGGTGAC-CCT-GAGCTGCCT----G-GGG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654369 35 - 3785965 CTGAGGACGAGGAGGTGAC-CCT-GAGCTGCCT----G-GGG- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39482 35 - 179258 CTGAGGACGAGGAGGTGAC-CCT-GAGCTGCCT----G-GGG- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525463 35 - 5823884 CTGTGGATGAGGAGGTGAC-CCT-GAGCTGCCT----G-GGG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7255 37 + 372756 CTGAGGATCAGAAGGTGAC-CCTGGAGCTGCCT----GCTGA- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16245879 40 + 16356641 GTGAGGACCAGAAGGTGAC-CCT-GAGCTGCCTGCTGGCTGG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1114182 39 + 1231380 CTGAGGACCAG-AGGTGAC-CCT-GAGCTGCATGCTGGTTGG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2643513 36 + 11732439 CTGAGGACCAGAAGGTGAC-CCT-GAGCTGCCT----GCTGG- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56828510 35 + 57149010 CTGAGGACCAGGAGGTGAC-CCC-GAGCTGCCT----G-GGG- i micMur3.chr18 I 3279 I 539 s proCoq1.NW_012150197v1 1822687 35 - 2029793 CTGAGGACCAGGAGGTGAC-TCC-GAGCTGCCT----G-GGG- i proCoq1.NW_012150197v1 I 1673 I 573 s otoGar3.GL873542 22805319 27 + 22939663 --------TAGAAGGTGAC-CCT-GAGCTGCCT----G-GAG- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47573477 31 + 47698779 ------CTAAGGAGGCGACATCT-GAGTTGCCC----C-AGGG i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e dasNov3.JH569290 208913 2013 - 397369 I a score=1170629.000000 s hg38.chr20_KI270870v1_alt 68240 161 + 183433 TGA-TGGGAGCTTCC-CTCGGCATCAGGGGAAGCTGGCCCAGAGGACAGCCGGGCTCCATGGTGAG-GCCAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGTGGGCAGTGAAAGGTC-GTGGGCCCAGTTCGAGGGACTAGGAATCATTCTGG-AAGAGGCCTC-TGCAGTG s panTro5.chr20 66393033 157 + 66533130 TGA-TGGGAGTTTCC-CTTGGCATCAGGGGAACGTGGCCCAGAGGACAGCCGGGCTCCATGGTGTGCGCCAAGTTCATCGTTC-----------------------------------------------------------------------------------------------------------------------------------------AAGGGCCCCTGTGGGCAGTGAAAGGTT-CTGGGCCTAGTTCGAGGACTAAGGAATCATTCTG---AGAGG-CTC-TGCAGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073388 161 + 62195757 TGA-TGGGAGCTACC-CTCGGCATCAGGGGAAGCTGGCCCAGAGGACAGCCGGGCTCCATGGTGTG-GCCAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGTGGGCAGTGAAAGGTC-ATGGGCCCAGTTCGAGGGACTAGGAATCATTCTGG-AAGAGGCCTC-TGCAGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458634 161 - 578057 TGA-TGGGAGCTTCC-CTCGGCATCAGGGGAAGCTGGCCCAGAGGACAGCCGGGCTCCATGGTGTG-GCCAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCTCTGTGGGCAGTGAAAGGTC-GTGGGCCCAGTTTGAGGGACTAGGAATCATTCTGG-AAGAGGCCTC-TGCAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109987061 152 - 110113093 TGA-TGGGAGCTTCC-CTCGGCATCAGGGGAAGCTGGCCCAGGGGACAGCCAGGCTCCATGGTGTG-GCTAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGG---CGGTGGGTGGTGAAAGGTC-GTGGCCCCCGTTGGAG------GGAATCATTCTGG-AAGAGGCCTC-TGCAGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92713928 162 - 92844088 TGA-TGGAAGCTTCC-CTCGGCATCAGGGAAAGCTGGCCCAGAGGACAGCCAGGCTCGATGCTGTG-GCCAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGTGGGCCGTTAAAGGTT-GTGGACCCAGTTTGAGGGACTAGGAATCATTCCGGAAAAAGGCCTC-TGCAGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96381910 162 + 96509753 TGA-TGGAAGCTTCC-CTCGGCATCAGGGAAAGCTGGCCCAGAGGACAGCCAGGCTCGATGCTGTG-GCCAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGTGGGCCGTTAAAGGTT-GTGGACCCAGTTTGAGGGACTAGGAATCATTCCGGAAAAAGGCCTC-TGCAGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852134 161 - 16982598 TGA-TGGAAGCTTCC-CTCGGCATCAGGGAAAGCTGGCCCAGAGGACAGCCAGGCTCGATGCTGTG-GCCAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGTGGGCCGTTAAAGGTT-GTGGACCCAGTTTGAGGGACTAGGAATCATTCCGG-AAGAGGCCTC-TGCAGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654404 161 - 3785965 TGA-TGGAAGCTTCC-CTAGGCATCAGGGAAAGCTGGCCCAGAGGACAGCCAGGCTCGATGCTGTG-GCCAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGTGGGCCGTTAAAGGTT-GTGGACCCAGTTTGAGGGACTAGGAATCATTCCGG-AAGAGGCCTC-TGCAGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39517 161 - 179258 TGA-TGGAAGCTTCC-CTCGGCATCAGGGAAAGCTGGCCCAGAGGACAGCCAGGCTCGATGCTGTG-GCCAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGTGGGCCGTTAAAGGTT-GTGGACCCAGTTTGAGGGACTAGGAATCATTCCGG-AAGAGGCCTC-TGCAGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525498 157 - 5823884 TGG-TGGAAGCTTCC-CTCGGCGTCAGGGAAA----GCCCAGAGGACAGCCAGGCTCGATGCTGTG-GCCAAGTTCATCGTTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGTGGGCCGTTAAAGGTT-GTGGACCCAGTTTGAGGGACGAGGAATCATTCCGG-AAGAGGCCTC-TGCAGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7292 160 + 372756 TAA-TGGGAGCTTCC-CTGGGTATAGCGGGGAGCT-GTCCAGAGGACAGCCAGGCTTGATGTTCTG-GCCATATTCATCATTT---------------------------------------------------------------------------------------------------------------------------------------CCAAGGGCCCCTGTGGGCAGGGAAAGCTC-ATGGACCCTGTTAGAGGCACTAGGGATCATTCCAG-AAGAGGCCTC-TCCAGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16245919 161 + 16356641 TGA-TGGGAGCTTCC-ATGGGCATCGGGGGAAGCTGGCCCAGAGGACGGCCGGGCTCGACGCTCCG-GCCACATTCATTATTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGCGGGCAGGGAAAGCTC-ATGGACCCAGTTAGAGGCACTGGGGATCATTCCAG-AAGAGGCCTC-TCCAGCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1114221 147 + 1231380 TGA-TGGGAGGTTCC-CTGGGCATCAGGGGAAGCTGGCCCAGAGGACGGCCAGGCTTGATGCTCTG-GCCATATTCATCATTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGCGGGCAGGGAAAGCTC---------------AGGCACTGGGGATCATTCCAG-AAGAGGCCTC-TCCAGCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2643549 161 + 11732439 TGA-TGGGAGCGTCC-CTGGGCATTGGGGGAAGCTGGCCCAGATGACAACCAGGCTTGATGCTCTG-GCCATATTCATCATTT---------------------------------------------------------------------------------------------------------------------------------------CAAAGGGCCCCTGCGGGCAGGGAAAGCTC-ATGGACCCAGTTAGCGGCACTAGGGATCATTCCAG-AAGAGGCCTC-TCCAGCG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22805346 277 + 22939663 ------------GCC-CCCAGCATCCAG--AAGCTGAGAGAGGGGACAACCAGGCTCAGTGGTATG-GTCAAGTTCATTGTTCCAAAGGGCTACCGGGTTTAGTCTTGACCTAGTCTGACTGAAGGGTCCCTGAACTCAGGGTGAGGCAGGAGGAACTCAGTGGTATGGCAGGAGGAACTCAGTGGTATGCTCAGTGGTATGGTCAAGTTCATTGTTCCAAAGGGCCTCAGTGGGTAGTGAAGGGTCCCTGAACTCAGGGTGAGGCAGGAGGAACCATCCCAG-AAAAGGCTTC-------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47573508 99 + 47698779 TGAGTGGGGGCTTCCTCCCAGCATTGGGGAAGTCCAGGGGAGGGGATGGCCAGACTCGAAGCTGGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTC------------------------CGGTCATCCC---TAAAGGCCTcctccaccc i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56828545 539 + 57149010 I e dasNov3.JH569290 208913 2013 - 397369 I a score=1099395.000000 s hg38.chr20_KI270870v1_alt 68401 172 + 183433 CCCACCTTCACTCCCATCCACACA-CCCTGCCCCT-CCCTG--G------CCCTGGCGCGGCTGTAGC--TG-CTGGAAGGTCCAGGTCC--------TTCTGGGCAG--CCCTCTC----TCCCTG-CCCTTTCCTTC---CTGCACACC-CC-ACC-CT---CT--GCCTGCAGGGCC------------TGAGGTT-G-------------T-CG-AGGGATTCTTGACTTCTACA s panTro5.chr20 66393190 180 + 66533130 CCCAC--TCACTCCCATCCACACATCCCTGCCCCT-CCCTGCCG------CCCTGGC-CGGCTGTAGCCTTGCCTGGAAGCTCCAGGTCC--------TTCTGGGCAGGCCCTTCTC----TCCCTGCCCCTTTCCTTC---CTGCACACCACC-ACCTCT---CT--GCC-GCAGGGCC------------TGAGGTTGG-------------T-CGCAGGGATTC-TGACTTCTACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073549 172 + 62195757 CCCACCTTCACTCCCATCCACACA-CCCTGCCCCT-CCCTG--G------CCCTGGCACGGCTGTAGC--TG-CTGGAAGGTCCAGGTCC--------TTCTGGGCAG--CCCTCTC----TCCCTG-CCCTTTCCTTC---CTGCACACC-CC-ACC-CT---CT--GCCTGCAGGGCC------------TGAGGTT-G-------------T-CG-AGGGATTCTTGACTTCTACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458795 172 - 578057 CCCACCTTCACTCCCATCCACACA-CCCTGCCCCT-CCCTG--G------CCCTGGCGCGGCTGTAGC--TG-CTGGAAGGTCCAGGTCC--------TTCTGGGCAG--CCCTCTC----TCCCTG-CCCTTTCCTTC---CTGCACACC-CC-ACC-CT---CT--GCCTGCAGGGCC------------TGAGGTT-G-------------T-CG-AGGGAGTCTTGACTTCTACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109987213 173 - 110113093 TCCACCTTCACTCCCATCCACACA-CCCTGCCCCT-CCCTG--A------CCCTGCTGTGGCTTTAGC--TG-CTGGAAGGTCCAGGTCC--------TTCTGGGCAG--CCCTCTC----TCCCTA-CCCTTTCCTTC---CTGCACACC-CC-ACC-CT---CT--GCCTGCAGGACC------------TGAGGTT-G-------------TCCG-AGGGAGTCTTGACTTCTACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714090 171 - 92844088 TGCACCTTCACTCCTATCCACACA-CCCTGCCCTT-CCCTA--C------CCCTG-TGTGGCTCTGGC--CG-CTGGAAGATCCAGGTCC--------CTCTGGGCAG--CGCTCTC----TCCCTG-CCCTTTCCTTC---CTGCTCACC-CC-AGC-CT---CT--GCCTGCAGGGCC------------TGGGGTT-G-------------T-CC-AGGGAGTCTTGACTTCTACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382072 171 + 96509753 TGCACCTTCACTCCTATCCACACA-CCCTGCCCTT-CCCTA--C------CCCTG-TGTGGCTCTGGC--CG-CTGGAAGATCCAGGTCC--------CTCTGGGCAG--CGCTCTC----TCCCTG-CCCTTTCCTTC---CTGCTCACC-CC-AGC-CT---CT--GCCTGCAGGGCC------------TGGGGTT-G-------------T-CC-AGGGAGTCTTGACTTCTACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852295 171 - 16982598 TGCACCTTCACTCCTATCCACACA-CCCTGCCCTT-CCCTA--C------CCCTG-TGTGGCTCTGGC--CG-CTGGAAGATCCAGGTCC--------CTCTGGGCAG--CGCTCTC----TCCCTG-CCCTTTCCTTC---CTGCTCACC-CC-AGC-CT---CT--GCCTGCAGGGCC------------TGGGGTT-G-------------T-CC-AGGGAGTCTTGACTTCTACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654565 171 - 3785965 TGCACCTTTACTCCTATCCACACA-CCCTGCCCTT-CCCTA--C------CCCTG-TGTGGCTCTGGC--CG-CTGGAAGATCCAGGTCC--------CTCTGGGCAG--CTCTCTC----TCCCTG-CCCTTTCCTTC---CTGCTCGCC-CC-AGC-TT---CT--GCCTGCAGGGCC------------TGGGGTT-G-------------T-CT-AGGGAGTCTTGACTTCTACA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39678 171 - 179258 TGCACCTTTACTCCTATCCACACA-CCCTGCCCTT-CCCTA--C------CCCTT-TGTGGCTCTGGC--CG-CTGGAAGATCCAGGTCC--------CTCTGGGCAG--CTCTCTC----TCCCTG-CCCTTTCCTTC---CTGCTCGCC-CC-AGC-TT---CT--GCCTGCAGGGCC------------TGGGGTT-G-------------T-CC-AGGGAGTCTTGACTTCTACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525655 168 - 5823884 CGCACCTTCACCCCCATCCACACA-CCCTGCCCTT-CCCTA--C------CC----TGTGGCTCTGGC--CG-CTGGAAGATCCGGGTCC--------CTCTGGGCAG--CCCTCTC----TCCCTG-CTCTTTCCTTC---CTGCTCACC-CC-AGC-CT---CT--GCCTGCAGGGCC------------TGAGGTT-G-------------C-CC-AGGGAGTCTTGACTTCTGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7452 167 + 372756 CTCACCTCTACTCCCCT-----CA-CTCTGTCCCT-CCCTA--C------CCCTGGTGTGGCTCTCAC--TG-CTGGGAGGTCCAGATCC--------CTCTGGGCAG--CTCTCTC----TCCCTG-CCCTTTCCTTC---CTGCACACC-CC-ACC-CT---CT--GCCTGCAGGGTC------------TGAGGTT-G-------------T-TG-AAGGAGTCCGGACTCCTACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246080 156 + 16356641 CCCACCCCTGCTCCCCT---CACA-CCCTGTCCCT-CCCTA--C------CCCTGGTGTGGCTCTCAC--TG-CTGGGAGGTCCAGATCC--------CTCTGGGCAG--CTCTC------------------TCCTTC---CTGCACACC-CC-ACC-CT---CT--GCCTGCAGGGTC------------TGAGGTT-G-------------T-CA-AAGGAGTCTTGACTCCTGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1114368 158 + 1231380 CCCACCTCCACTCCCCT---CACA-CCCTGTCACT-CCCTA--C------CCCTGCTGTGGCTCTCAC--TG-CTAGGAGGTCCAGATCC--------CTCTGGGCAG--CTCTCTC----------------TCCTTC---CTGCACACC-CC-ACT-CT---CT--GCCTGTAGGGTC------------TGAGGTT-G-------------T-CG-AAGGAGTCTGGACTCCTACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2643710 166 + 11732439 CCCACCTCCACTCCCCT---CACA-CGCTGTCCCT-CCTGA--C------CCC-GGTGTGGCTCTCGC--TG-CTGGGAGGTCCAGATCC--------CTCT--GCAG--CTCCCCC----TCCCTG-CCCTTTCCTTC---CTGCATACC-CC-ACC-CT---CT--GCCTGCAGGGTC------------TGAGGTT-G-------------T-CG-AAGGAGTCTTGACTCCTACA i aotNan1.NW_018500483v1 C 0 I 241 s otoGar3.GL873542 22805623 117 + 22939663 CCCATCTCC-------------CT-CCTTGTTCTTGCCCTC--C------CCATGAAGTGA-TGAAGC--TG-CTGGAAAGCCTGAGTGC--------CTCC--TCAG--CCCTCTC---CTCCCTG-------CAGTC---CTGCCCACC-AC-CCC-CA---CCAGGCCTCC----------------------------------------------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47573607 147 + 47698779 tccaccctccaccctccacccCGA-CCCTTGCCCT-CCCCA--C------TCCTG--GCCGGAGGAGC--AG-CTGG-AGGTCCAGACCCACATTCTTCCCTTGGAAA--CATCCCC----AGCAGG-TTCCATCCTCCTAACCGTCCACC-TG-TCC-CTCACCT--TCCTGCA---------------------------------------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 210926 198 - 397369 cccacctcccgtctctacctccca-cctcccacct-cccac--ctACCCGCCCTGGTCTGGATGGAAT--TG-ACACAGGGTCCAAACCC---------------AAG--CTCCTCCAGCTCCCCTT-GCCCCTCTTCC---CTACACATC-TCGATT-TT---CT--GCCTGCAGGACCTTGATTCAATTTTGGGGTT-GAAGCTGCTCCTGCT-CC-TGGAATTACCGTCTCCC--- i dasNov3.JH569290 I 2013 C 0 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56828545 539 + 57149010 I a score=417023.000000 s hg38.chr20_KI270870v1_alt 68573 75 + 183433 GTTTGCCTCCCCCTGGCACCTCCCAC-CATACCTTGTGCCTGG-GATCTG-----GTGGTGG--GGAGTCAACCACAC-CAGCTG s panTro5.chr20 66393370 76 + 66533130 GTTTGCCTCCCTCTGGCACGTCCCAC-CATACCTTCTGCCTGGCGATCTG-----GTGGTGG--GTGATCAACCACAC-CAGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073721 75 + 62195757 GTTTGCCTCCCCCTGGCACCTCCCAC-CATACCTTCTGCCTGG-GATCTG-----GTGGTGG--GGAGTCAACCACAC-CAGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 458967 75 - 578057 GTTTGCCTCCCCCTGGCACCTCCCAC-CATAGCTTCTGCCTGG-GATCTG-----GTGGTGG--GGAGTCAACCACAC-CAGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109987386 75 - 110113093 GTTTGCCTCCCCCTGGCACCTCCCAC-CATAGCTTCTGCCTGG-GACCTG-----GTGGTGG--GGAGTCACTCACAC-CAGCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714261 74 - 92844088 GTGCCCCTCCCC-CGGCACCTCCCAC-CATAGCTTCTTCCTGG-CACCTG-----GTGGTGG--GGAGTCAACCACGG-CAGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382243 74 + 96509753 GTGCCCCTCCCC-CGGCACCTCCCAC-CATAGCTTCTTCCTGG-CACCTG-----GTGGTGG--GGAGTCAACCACGG-CAGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852466 74 - 16982598 GTGCCCCTCCCC-CGGCACCTCCCAC-CATAGCTTCTTCCTGG-CACCTG-----GTGGTGG--GGAGTCAACCACGG-CAGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654736 75 - 3785965 GTGCCCCTCCCCTTGGCACCTCCCAC-CATAGCTTCTTCCTGG-CACCTG-----GTGGTGG--GGAGTCAACCACGG-CAGCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39849 75 - 179258 GTGCCCCTCCCCTTGGCACCTCCCAC-CATAGCTTCTTCCTGG-CACCTG-----GTGGTGG--GGAGTCAACCACGG-CAGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525823 74 - 5823884 GTGCCCCTCCCC-CGGCACCTCCCAC-CATAGCTTCTTCCTGG-CACCTG-----GTGGTGG--GGAGTCAACCACGG-CAGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7619 79 + 372756 CTTCATTTCCCC-CAGCACCTCCCAC-AATAGCTTCTGCCTGG-GACTAGACCGAATTGGGA--GGAGTCAACCACAC-CAGCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246236 79 + 16356641 CTTCACCACCCC-CAGCACCTCCCAC-CATAGCTTCTGCCTGG-GACTAGACTGAATTGGGG--GCAGTCAACCACAC-CGGCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1114526 77 + 1231380 CTTAAC--CCCC-CAGCACCTCCCAC-CATAGCTTCTGCCTGG-GACTAGACCGAATTGGAG--GGAGTCAACCACAC-CGGCCC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22805740 69 + 22939663 CTTCCCCTCCCTTTTTCCCCTCCATCTCTTGGCTTCTCCCTGG------------ATGAGAGTTGGGGTCGCCCA----TAGCTG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47573754 49 + 47698779 ---ACCCTCCCC-CAAGCCTCCCCAC------------CTGGG-AGGCAG-----GTGGCAG--GCCGTGGTT------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 211124 71 - 397369 -TTCACCTCCCCCCA--ACTTCCCCC-CAT--TTCCTGCCCTG-GGACAG-----GTAACAG--GGAGTGGACTTTGCTCAGTTA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181762378 588 + 182113224 I e micMur3.chr18 56828545 539 + 57149010 I e aotNan1.NW_018500483v1 2643876 241 + 11732439 I a score=437291.000000 s hg38.chr20_KI270870v1_alt 68648 69 + 183433 ---------------------------------AGGGCCCTCAG-------GGGCCT--TGTCTCAACAGGC-AGTGATTGGGTTG-TAGGGA-GCG-----------AGA-CCTG-ACCC--CACTCA------------------- s panTro5.chr20 66393446 70 + 66533130 ---------------------------------AGAGCCCTCAG-------GGGCCT--TGTCCATACAGGCAAGTGATT-GGTTG-TA-GGA-GCG-----------AGACCCTGCACCC--CACTCA------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073796 69 + 62195757 ---------------------------------AGGGCCCTCAG-------GGGCCT--TGTCTCAACAGGC-AGTGATTGGGTTG-TAGGGA-GCG-----------AGA-CCTG-ACCC--CACTCA------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459042 71 - 578057 ---------------------------------AGGGCCCTCAG-------GGGCCTGCCGTCTCAACAGGC-AGTGATTGGGTTG-TAGGGA-GCG-----------AGA-CCTG-ACCC--CACTCA------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109987461 71 - 110113093 ---------------------------------AGGGCCCTCAG-------GGGCCTGCCCTCTCGACAGCC-AGTGATTGGGTTG-TGGGGA-GCC-----------AGA-CCTG-ACCC--CACTCA------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714335 71 - 92844088 ---------------------------------AGGGCTCTCAG-------GGGCCTGCCCCCTCAACAGCC-AATGATTGGGTTG-TGTGGA-GCC-----------AGA-CCTG-ACCC--CACTCA------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382317 71 + 96509753 ---------------------------------AGGGCTCTCAG-------GGGCCTGCCCTCTCAACAGCC-AATGATTGGGTTG-TGTGGA-GCC-----------AGA-CCTG-ACCC--CACTCA------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852540 71 - 16982598 ---------------------------------AGGGCTCTCAG-------GGGCCTGCCCTCTCAACAGCC-AATGATTGGGTTG-TGTGGA-GCC-----------AGA-CCTG-ACCC--CACTCA------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654811 71 - 3785965 ---------------------------------AGGGCTCTCAG-------GGGCCTGCCCTCTCAACAGCC-AATGATTGGGTTG-TGTGGA-GCC-----------AGA-CCTG-ACCC--CACTTA------------------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39924 71 - 179258 ---------------------------------AGGGCTCTCAG-------GGGCCTGCCCTCTCAACAGCC-AATGATTGGGTTG-TGTGGA-GCC-----------AGA-CCTG-ACCC--CACTCA------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525897 71 - 5823884 ---------------------------------AGGGCCCTCAG-------GGGCCTGCCCTCTCAACAGCC-AGTGATTGGGTTG-TGGGGA-GCC-----------AGA-CCTG-ACCC--CACGCA------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7698 72 + 372756 ---------------------------------AGGGCCCTCAG-------GGGCCTGCCCTCTTGACAGCC-AATGAGTGGGTTGTTGGGGA-ACC-----------AGG-CCTG-ACCC--CACTCA------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246315 71 + 16356641 ---------------------------------AGGACCCTCAG-------GGGCCTGCCCTCTCGACAGCC-AGTGAGTGGGTTG-TGGGGA-GCC-----------AGG-CTTG-ACCC--CACTTA------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1114603 71 + 1231380 ---------------------------------AGGGCCCTCAG-------GGGCCTGCCCTCTCGACAGCC-AGTGGGTGGGTTG-CGGGGA-GCC-----------AGG-CCTG-ACCC--CACTCA------------------- i cebCap1.NW_016107870v1 C 0 I 103 s otoGar3.GL873542 22805809 55 + 22939663 ---------------------------------AGGAACCTCAG-------GGGCC-----------------AAGGATTGGGTTA-GGGGGAGGCC-----------AGA-GCTG-A-CC--CACACA------------------- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181762966 74 + 182113224 ---------------------------------AAGGGCCTCAG-------TGGGCTATCCTGTACATAG---GGTAA------TG-TAGAGG-ACTCATCCCTGAAAAAG-CCTG-TTCT--CCTTCC------------------- i mm10.chr2 I 588 C 0 s canFam3.chr24 47573803 49 + 47698779 ---------------------------------CGGAGGCACAG-------GGGCCT-----------------------GGGGTA-AGGCTC-CCC-----------AGA-CCTG-AGCC--CACCCC------------------- i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 211195 123 - 397369 CCTGCCCTTCTATGGCTGTGGACCGTGTTGGGGGGAGGCCACAGTCCCTCCAGAACTGACCCCCACCCTGCC----------GCCA-TCAGGA-GCG-----------AGG-CCCG-ATCTAGCACTGACAATCTCACCTGCAGCCCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56828545 539 + 57149010 I e aotNan1.NW_018500483v1 2643876 241 + 11732439 I a score=-7149.000000 s hg38.chr20_KI270870v1_alt 68717 2 + 183433 TG s panTro5.chr20 66393516 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073865 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459113 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109987532 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714406 2 - 92844088 CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382388 2 + 96509753 CC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852611 2 - 16982598 CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3654882 2 - 3785965 CC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 39995 2 - 179258 CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5525968 2 - 5823884 CC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7770 1 + 372756 -G i calJac3.chrUn_GL286459 C 0 I 104 s saiBol1.JH378156 16246386 1 + 16356641 -G i saiBol1.JH378156 C 0 I 84 s otoGar3.GL873542 22805865 1 + 22939663 C- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181763040 2 + 182113224 CA i mm10.chr2 C 0 C 0 s canFam3.chr24 47573854 2 + 47698779 CC i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 211318 2 - 397369 TG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56828545 539 + 57149010 I e cebCap1.NW_016107870v1 1114674 103 + 1231380 I e aotNan1.NW_018500483v1 2643876 241 + 11732439 I a score=400889.000000 s hg38.chr20_KI270870v1_alt 68719 49 + 183433 CATCCTGGCTGGTTCCCCACCAG-GTTTCAGGCTGGACC-----------------TAGTGTG-G----CA---G- s panTro5.chr20 66393518 53 + 66533130 CATCCTGGCTGGTTCCCCACCAG-GTTTCA-GCTGGACC----------------ATAGTGTGCG----CACCTG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073867 49 + 62195757 CATCCTGGCTGGTTCCCCACCAG-GTTTCAGGCTGGACC-----------------TAGTGTG-G----CA---G- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459115 49 - 578057 CATCCTGGCTGGTTTCCCACCAC-GTTTCAGGCTGGACC-----------------TAGTGTG-A----CA---G- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109987534 39 - 110113093 CATCCTGGCTGGTGCCCCGA-----------GCTGGACC-----------------TAGTCTG-A----CA---G- i nomLeu3.chr13 C 0 M 448 s rheMac8.chr10 92714408 49 - 92844088 CATCCTGGCTGGTTGCCCACCAG-GTTTCATCCTGGACC-----------------TGGTCTG-A----CA---G- i rheMac8.chr10 C 0 I 4 s macFas5.chr10 96382390 49 + 96509753 CATCCTGGCTGGTTGCCCACCAG-GTTTCATCCTGGACC-----------------TGGTCTG-A----CA---G- i macFas5.chr10 C 0 I 4 s macNem1.NW_012014244v1 16852613 49 - 16982598 CATCCTGGCTGGTTCCCCACCAG-GTTTCATCCTGGACC-----------------TGGTCTG-A----CA---G- i macNem1.NW_012014244v1 C 0 I 4 s cerAty1.NW_012001373v1 3654884 49 - 3785965 CATCCTGGCTGGTTCCCCACCAG-GTTTCATCCTGGACC-----------------TGGTCTG-A----CA---G- i cerAty1.NW_012001373v1 C 0 I 4 s manLeu1.NW_012101652v1 39997 49 - 179258 CATCCTGGCTGGTTCCCCACCAG-GTTTCATCCTGGACC-----------------TGGTCTG-A----CA---G- i manLeu1.NW_012101652v1 C 0 I 4 s colAng1.NW_012114444v1 5525970 49 - 5823884 CATCCTGGCTGGTTCCCCACCAG-GTTTCGTTCTGGACC-----------------TGGTCTG-A----CA---G- i colAng1.NW_012114444v1 C 0 I 3 s calJac3.chrUn_GL286459 7875 48 + 372756 CA-CCTGGCTGGTTCCCTACTAG-GTTTCAGGCTGGACC-----------------CGGTCTG-A----CA---G- i calJac3.chrUn_GL286459 I 104 I 2 s saiBol1.JH378156 16246471 49 + 16356641 CATCCTGGCTGGTTCCCCACCCG-GTTTCAGGCTGGACC-----------------TGGTCTG-A----CA---G- i saiBol1.JH378156 I 84 I 2 s cebCap1.NW_016107870v1 1114777 49 + 1231380 CATCCTGGCGGGCTCCCCACCAG-GTTTCAGTCTGGACC-----------------CGGTCTG-A----CA---G- i cebCap1.NW_016107870v1 I 103 I 2 s aotNan1.NW_018500483v1 2644117 49 + 11732439 CATCCTGGCTGGTTCCTTACCAA-GTTTCAGGCTGGACC-----------------CGGTCTG-A----CA---G- i aotNan1.NW_018500483v1 I 241 I 2 s otoGar3.GL873542 22805866 48 + 22939663 CATTCCTGACAGATCCCCACCAG-GTTT-AGTCTTGACC-----------------TAGTCTG-A----CA---G- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763042 48 + 182113224 CTTGCTGACTTGTT-CCCACCAG-ACTGCAGGCTTGATC-----------------TAGTGTG-A----CA---G- i mm10.chr2 C 0 C 0 s canFam3.chr24 47573856 48 + 47698779 CATGCAGACTGGTCTCCCCCCAG-GTTTCTGGCCTGACT-----------------TTGCCTG-G----AG----- i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 211320 71 - 397369 CTTCCTGG-GGTTTGTCTACCAGCACTTCCTGTTGGCCCCTACACCCTGGGACCCACCACCTG-AGGCTCA---GA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56828545 539 + 57149010 I a score=254652.000000 s hg38.chr20_KI270870v1_alt 68768 80 + 183433 TTCCGAGAGAGG---------------------------------------------------------------AAGCGGGGGA------AGGGATGCATCTTCAG-----------------GAAGG--GCCCCCTCCCCTCACTCACT------------------------G-TGAGTCCATTACTGTG s panTro5.chr20 66393571 88 + 66533130 TTCCGAGAGAGG---------------------------------------------------------------AAGCGGGGGAAGGCGGAGGGAT-CATCTCAAG-----------------GAAGGCTCCCCCCCCTCCTCACTCACT------------------------GCTGAGTCCATTACTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073916 79 + 62195757 TTCCGAGAGAGG---------------------------------------------------------------AAGCGGGGGA------AGGGATGCATCTTCAG-----------------GAAGG---CCCCCCCCCCTCACTCACT------------------------G-TGAGTCCATTACTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459164 80 - 578057 TTCCGAGAGAGG---------------------------------------------------------------AAGCGGGGGA------AGGGATGCATCTTCAG-----------------GAAGG--GCCCCCTCCCCTCACTCACT------------------------G-TGAGTCCATTACTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92714461 79 - 92844088 ACCCGAGAGAGG---------------------------------------------------------------AAGTGGGGGA------AGGGATGCATCTTCAG-----------------GAAGG---GCCCCTCCCCTCCCTCACT------------------------G-TGAGTCCATTACTGTG i rheMac8.chr10 I 4 C 0 s macFas5.chr10 96382443 79 + 96509753 ACCCGAGAGAGG---------------------------------------------------------------AAGTGGGGGA------AGGGATGCATCTTCAG-----------------GAAGG---GCCCCTCCGCTCCCTCACT------------------------G-TGAGTCCATTACTGTG i macFas5.chr10 I 4 C 0 s macNem1.NW_012014244v1 16852666 79 - 16982598 ACCCGAGAGAGG---------------------------------------------------------------AAGTGGGGGA------AGGGATGCATCTTCAG-----------------GAAGG---GCCCCTCCCCTCCCTCACT------------------------G-TGAGTCCATTACTGTG i macNem1.NW_012014244v1 I 4 C 0 s cerAty1.NW_012001373v1 3654937 79 - 3785965 ACCCGAGAGAGG---------------------------------------------------------------AAGTGGGGGA------AGGGATGCATCTTCAG-----------------GAAGG---GCCGCTCCCCTCCCTCACT------------------------G-TGAGTCCATTACTGTG i cerAty1.NW_012001373v1 I 4 C 0 s manLeu1.NW_012101652v1 40050 78 - 179258 ACCCGAGAGA-G---------------------------------------------------------------AAGTGGGGGA------AGGGATGCATCTTCAG-----------------GAAGG---GCCCCTCCCCTCCCTCACT------------------------G-TGAGTCCCTTACTGTG i manLeu1.NW_012101652v1 I 4 C 0 s colAng1.NW_012114444v1 5526022 32 - 5823884 ----------------------------------------------------------------------------------------------------------------------------------------CTCCCCTCCCTCACT------------------------G-TGAGTCCATTACTGTG i colAng1.NW_012114444v1 I 3 C 0 s calJac3.chrUn_GL286459 7925 77 + 372756 CTGCCTGAGAGG---------------------------------------------------------------AAGC-AGGGA------AGGGATGCAGCTTCAG-----------------GAAGG---GCC-CTCCCTTCACTCACC------------------------A-CAAGTCCATTACTGTG i calJac3.chrUn_GL286459 I 2 C 0 s saiBol1.JH378156 16246522 75 + 16356641 CCGCTTGAGAGG---------------------------------------------------------------AAGC-AGGGA------AGGGTTGCAGCTTCAG-----------------GAAGG---GCC-CTCCC--CACTCACC------------------------G-CGAGTCCATTACTGTG i saiBol1.JH378156 I 2 C 0 s cebCap1.NW_016107870v1 1114828 77 + 1231380 CCGCCTGAGTGG---------------------------------------------------------------AAGC-AGGGA------GGGGATGCAGCTTCAG-----------------AAAGG---GCC-CTCCCTTCACTCCTC------------------------G-CAAGTCCATTACTGTG i cebCap1.NW_016107870v1 I 2 C 0 s aotNan1.NW_018500483v1 2644168 77 + 11732439 CCGTCTGAGAGG---------------------------------------------------------------AAGC-AGGGA------AGGGATGCAGCTTCAG-----------------GAAGG---GCC-CTCCCTTCACTCACC------------------------G-CGAGTCCATTACTGTG i aotNan1.NW_018500483v1 I 2 C 0 s otoGar3.GL873542 22805914 34 + 22939663 --------------------------------------------------------------------------------------------------------------------------------------CTCCACCCTCCCTTCCC------------------------C-AAGGTTATTTCTTTTG i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181763090 44 + 182113224 ------------------------------------------------------------------------------------------------CCCAATTCTAG-------------------------CCACATCTCCTCCTTCACT------------------------G-T---TCAACTATAGTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47573905 143 + 47698779 GCCTggaagaggcagggaaagtgggaggaggaaggggagcggggaggagggagatagaatacagggggaggggcaaagtgggagaggggaggaggaagagTCTTGGG-----------------GAAGA---GCCCCTCCCCGCCCTCATT------------------------T----GTCCCCTCGTG-- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 211391 120 - 397369 TTACTTGGGGGG---------------------------------------------------------------AAGGTGGGAA------GGAAGCAAAATTTCTGCTTCCATCAGCCTCCCCGGTGG---GCTGTGCTCTTCTCCCACTCCCGGTCGTGAGGAGGGGAGGCTGA-TGGGGCTCTCCCAGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56828545 539 + 57149010 I e nomLeu3.chr13 109987573 448 - 110113093 M a score=660104.000000 s hg38.chr20_KI270870v1_alt 68848 80 + 183433 TG---GGAAGGGCTGTGTCTC-TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGC-GGGGTGGGGG-AGAGATTGTCTGGGGCCTG-A s panTro5.chr20 66393659 84 + 66533130 TGT--GGAAGGGCTGTGTCTCGTGCCTCCCCTCATTCCCTTCCCCTGGCCGCTCCGGGGGTGGGGG-AGAGA-TGTCTGGGGCCTGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62073995 80 + 62195757 TG---GGAAGGGCTGTGTCTC-TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGC-GGGGTGGGGG-AGAGATTGTCTGGGGCCTG-A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459244 80 - 578057 TG---GGAAGGGCTGTGTCTC-TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGC-GGGGTGGGGG-AGAGATTGTCTGGGGCCTG-A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988023 80 - 110113093 TG---GGAAGGGCTGTGTCTC-TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGT-GGGGTGGGGG-AGAGATTGTCTGGGGCCTG-A i nomLeu3.chr13 M 448 C 0 s rheMac8.chr10 92714540 75 - 92844088 TG---GGAAGCCCTG-------TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGC-GGGGTGGGGGGAGAGATTGTCTGGGGCCTG-A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382522 75 + 96509753 TG---GGAAGCCCTG-------TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGC-GGGGTGGGGGGAGAGATTGTCTGGGGCCTG-A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852745 75 - 16982598 TG---GGAAGCCCTG-------TGTCTCCCCTCACTCCCCTTCCCTGGCC-CTGC-GGGGTGGGGGGAGAGATTGTCTGGGGCCTG-A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655016 81 - 3785965 TG---GGAAGCCCTGTGTCTC-TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGC-GGGGTGGGGGGAGAGATTGTCTGGGGCCTG-A i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40128 81 - 179258 TG---GGAAGCCCTGTGTCTC-TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGT-GGGGTGGGGGAAGAGATTGTCTGGGGCCTG-A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526054 80 - 5823884 TG---GGAAGCCCTGTGTCTC-TGCCTCTCCTCACTCCCCTTCCCTAGCC-CTGC-GGGGTGGGGG-AGAGATTGTCTGGGGCCTG-A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8002 81 + 372756 TG---GGAAGGGCTGTGTCTT-TGCCTCCCCTCACTGCCCTTCCCTGGCC-CTGT-GGGGTGGGGGGAGAGGTTGTCTGGGGCCTG-A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246597 80 + 16356641 TG---GAAAGGGCTGTGTCTT-TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGT-GGGGT-GGGGGAGAGGTTGTCTGGAGCCTG-A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1114905 80 + 1231380 TG---GGAAGGCCTGTGTCTC-TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGT-GGGGTGGGGGGAGAGGTTGTCTGG-GCCTG-A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644245 81 + 11732439 TG---GGAAGGGCTGTGTCTT-TGCCTCCCCTCACTCCCCTTCCCTGGCC-CTGT-GGGGTGGGGGGAGAGGTTGTCTGGGGCCTG-A i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22805950 51 + 22939663 --TGAGGAGGGGCTAAGTCTT-TGCC-------------------------CAGC----ATTGGGG----CATTGTCAGGGACCAG-A i otoGar3.GL873542 I 2 I 1 s mm10.chr2 181763134 64 + 182113224 TA---GGGAG------------GGGCTACTCCTACTCCCCTGCTTTGGC--CTGC-AGGCGGGGCC----CATTGTTTGG-GCCTG-A i mm10.chr2 C 0 I 1 s canFam3.chr24 47574048 61 + 47698779 ----AGGAGAGGCTCTGTCTT-TGCTTTTCCCCAC----------------CTGC-AGGCGGGGCT----CATTGTCTGGGGTCTC-G i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 211511 58 - 397369 AG---GGGCGTGCTGTGCCTT-CGCCT------------------------CCGT-TCGGCAGGGGAGGCCATTGTCTGGGGTCTG-A i dasNov3.JH569290 C 0 I 1 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56828545 539 + 57149010 I a score=541701.000000 s hg38.chr20_KI270870v1_alt 68928 36 + 183433 GCCCATTGTGTGGAGAA----------GAGAGCCTCATTGGCAGGC s panTro5.chr20 66393743 36 + 66533130 GCCCATTGTGTGGAGAA----------GAGAGCCTCATTGGCAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074075 36 + 62195757 GCCCATTGTGTGGAGAA----------GAGAGCCTCATTGGCAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459324 36 - 578057 GCCCATTGTGTGGAGAA----------GAGAGCCTCATTGGCAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988103 36 - 110113093 GCCCATTGTGTGGAGAA----------GAGAGCCTCATTGGCAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714615 36 - 92844088 GCCCATTGTGTGGAGAA----------GAGAGTCTCATTGGCAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382597 36 + 96509753 GCCCATTGTGTGGAGAA----------GAGAGTCTCATTGGCAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852820 36 - 16982598 GCCCATTGTGTGGAGAA----------GAGAGTCTCATTGGCAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655097 36 - 3785965 GCCCATTGTGTGGAGAA----------GAGAGTCTCATTGGCAGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40209 36 - 179258 GCCCATTGTGTGGAGAA----------GAGAGTCTCATTGGCAGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526134 36 - 5823884 GCCCATTGTGTGGAGAA----------GAGAGTCTCATTGGCAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8083 36 + 372756 GCCCATTGTGTGGAGAA----------GAGAGCCTCATTGGCAGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246677 36 + 16356641 GCCCATTGTGTGGAGGA----------GAGAGCCTCATTGGCAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1114985 36 + 1231380 GCCCATTGTGTGGAGAG----------GAGAGCCTCATTGGCAGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644326 36 + 11732439 GCCCATTGTGTGGAGGA----------GAGAGCCTCATTGGCAGGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56829084 36 + 57149010 GCCCATTGTGCGGGGAA----------GGAAGCCTCATTGGCAGGC i micMur3.chr18 I 539 I 26 s otoGar3.GL873542 22806002 34 + 22939663 GCCCATTGTGTAGGGAA----------TAACGCCTCATTGGCCA-- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181763199 36 + 182113224 GCCCATTGTGTGGGGAA----------GGGAGCCTCATTGGCAGGC i mm10.chr2 I 1 C 0 s canFam3.chr24 47574110 35 + 47698779 GCCCATTGTGTGGGGAA----------GGGAGCCTCATTGGCAGG- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 211570 45 - 397369 GCCCATTGTGTAGCGACTGGCGGCTCTGCGAGCCTCATTGGCAGC- i dasNov3.JH569290 I 1 C 0 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=181559.000000 s hg38.chr20_KI270870v1_alt 68964 16 + 183433 AGCCGGGGCATCAATT s panTro5.chr20 66393779 16 + 66533130 ACCGGGGCCATCAATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074111 16 + 62195757 AGCTGGGGCATCAATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459360 16 - 578057 AGCCGGGGCATCAATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988139 16 - 110113093 AGCCGGGGCATCAATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714651 16 - 92844088 AGCCGGGGTATCAATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382633 16 + 96509753 AGCCGGGGTATCAATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852856 16 - 16982598 AGCCGGGGTATCAATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655133 16 - 3785965 AGCCGGGGTATCAATT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40245 16 - 179258 AGCCGGGGTATCAATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526170 16 - 5823884 AGCCGGGGTATCAATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8119 16 + 372756 AGCCGGGGCATCAATT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246713 16 + 16356641 AGCCGGGGCATCGATT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115021 16 + 1231380 AGCCGGGGCATCAATT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644362 16 + 11732439 AGCCGGGGCATCAATT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22806036 14 + 22939663 --CTGAGACACCAACT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763235 14 + 182113224 AGCCGG--CATCAATT i mm10.chr2 C 0 C 0 s canFam3.chr24 47574145 9 + 47698779 -------GCATCAATT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 211615 16 - 397369 CGCAGGGGCATTAAGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1822722 573 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829120 26 + 57149010 I a score=185142.000000 s hg38.chr20_KI270870v1_alt 68980 13 + 183433 TGTGATTATCTGC s panTro5.chr20 66393795 13 + 66533130 TGTGATTATCTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074127 13 + 62195757 TGTGATTATCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459376 13 - 578057 TGTGATTATCTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988155 13 - 110113093 TGTGATTATCTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714667 13 - 92844088 TGTGATTATCTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382649 13 + 96509753 TGTGATTATCTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852872 13 - 16982598 TGTGATTATCTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655149 13 - 3785965 TGTGATTATCTGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40261 13 - 179258 TGTGATTATCTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526186 13 - 5823884 TGTGATTATCTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8135 13 + 372756 TGTGATGATCTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246729 13 + 16356641 TGTGATGATCTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115037 13 + 1231380 TGTGATGATCTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644378 13 + 11732439 TGTGATGATCTGC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1823295 12 - 2029793 TGTGATTATCTG- i proCoq1.NW_012150197v1 I 573 C 0 s otoGar3.GL873542 22806050 13 + 22939663 TGTCATTATCTGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763249 13 + 182113224 TGTGATTATGTGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47574154 13 + 47698779 TGTGCTTATCTGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 211631 13 - 397369 GGCGATTATCCTC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829120 26 + 57149010 I a score=1885052.000000 s hg38.chr20_KI270870v1_alt 68993 134 + 183433 TCCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCTG-GGACAC--AAGTTTGTGCAGCAACTTTTTCCAGCA-TGAAG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACCC-CCT------------GGC-CAGGATGACGC s panTro5.chr20 66393808 140 + 66533130 TCCCTTGCGTCGT-GATT-GCTGGAGTGCAGTGGGGTCTCCCCAGGGCGCCTGCGGACAC--AAGTTTGTGCAGCAATCTTTTCCAGCAGTGAAGATGAC-GTG---TCT-----CCGCAAGGAGAA-GTGCACCC-CCT------------GGCTCAGGATGACGC i panTro5.chr20 C 0 I 28 s panPan2.chr20 62074140 134 + 62195757 TCCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCTG-GGACAC--AAGTTTGTGCAGCAACTTTTTCCAGCA-TGAAG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCAACC-CCT------------GGC-CAGGATGACGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459389 134 - 578057 TCCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCTG-GGACAC--AAGTTTGTGCAGCAACTTTTTCCAGCA-TGAAG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACCC-GCT------------GGC-CAGGATGATGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988168 134 - 110113093 TGCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCTG-GGACAC--AAGTTTGTGCAGCAACTTTTTCCAGCA-TGAAA-TGAC-GTG---TGT-----TCCCAAAGAGAAGGTGCACCC-CCT------------GGC-CAGGATGACGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714680 134 - 92844088 TCCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCCG-GGACAC--AAGTTTGTGCAGCAACTTTTTTCAGCA-TGAAG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACCT-CCT------------GGC-CAGGATGACAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382662 134 + 96509753 TCCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCCG-GGACAC--AAGTTTGTGCAGCAACTTTTTTCAGCA-TGAAG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACCT-CCT------------GGC-CAGGATGACAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16852885 134 - 16982598 TCCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCCG-GGACAC--AAGTTTGTGCAGCAACTTTTTTCAGCA-TGAAG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACCT-CCT------------GGC-CAGGATGACAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655162 134 - 3785965 TCCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCCG-GGACAC--AAGTTTGTGCAGCAACTTTTTTCAGCA-TGAAG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACCT-CCT------------GGC-CAGGATGACAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40274 134 - 179258 TCCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCCG-GGACAC--AAGTTTGTGCAGCAACTTTTTTCAGCA-TGAAG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACCT-CCT------------GGC-CAGGATGACAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526199 134 - 5823884 TCCCT--GGTCTT-GATTGGCTGGA-TGCAGTGGGGTCTCCCCAGGGC-CCCG-GGACAC--AAGTTTGTGCAGCAACTTTTTCCAGCA-TGAAG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACCT-CCC------------GGC-CAGGATGACAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8148 124 + 372756 TCCCT--GGTCTT-GATTGGCTGGA-GGCAGTGGGGTCTCCCCAGGGC-CCTG-GGACAC--AAGTTTGAGCAGCAACTTTTTCCAGCA-TGAGG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGT-----------------------GC-CAGGATGACGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246742 134 + 16356641 TCCCT--GGTCTT-GATTGGCTGGA-GGCAGTGGGGTCTCCCCAGGGC-CCTG-GAACAC--AAGTTTGAGCAGCAACTTTTTCCAGCA-TGAGG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACTC-CCT------------GGC-CAGGATGACGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115050 146 + 1231380 TCCCT--GGTCTT-GATTGGCTGGA-GGCAGTGGGGTCTCCCCAGGGC-CCTG-AGACAC--AAGTTTGAGCAGCAACTTTTTCCAGCA-TGAGG-TGAC-GTG---CGT-----TCCCAGAGAGAAGGTGCACCC-CCTTCTCCGCAGAGAAGC-CAGGATGATGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644391 134 + 11732439 TCCCT--GGTCTT-GATTGGCTGGA-GGCAGTGGGGTCTCCCCAGGGC-TCTG-GGACAC--AAGTTTGAGCAGCAACTTTTTCCAGCA-TGAGG-TGAC-GTG---TGT-----TCCCAGAGAGAAGGTGCACCC-CCT------------GGC-CAGGATGACGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56829146 140 + 57149010 TCCCT--GGTCTT-GATTGGCTGGA-GGCAGAGGGGGCTCCCCAGGGC-CCTG-GGACAC--AAGTTTGAACAGCAACTTTCTCCAGCA-TGAAG-TGAC-ATG---TGTCCAGGCCCCGGAGAGAAGGTGCACCTGCCC------------GGG-CAGGATGGCGT i micMur3.chr18 I 26 C 0 s proCoq1.NW_012150197v1 1823307 140 - 2029793 TCCCT--GGTCTT-GATTGGCTGGG-TGCGGAGGGGGTTCCCCCGGGC-CCTG-GGACAC--AAGTTTGTACGGCAACTTTTTCCAGCA-CGAAG-TGAC-ATG---TGTCCAGGCCCCGGAGAGAAGGTGCACCTCCCT------------GGC-CAGGATGGCTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22806063 137 + 22939663 TCCCT--GGTCTT-GATTGGCTGGA-TGTAGTGGGGTCTCCTCAGGGC-CCTA-GGACAC--AAGTTTGTATAGCAACTTTTTCCAGCA-TGAAG-TGAC-ATG---TGCCCAGGCCC--GAGAGAAGGTACACCTCCCT------------GG--CAGGATGGCGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763262 140 + 182113224 TCTCT---GTTTT-GATTGGCTGGT-TGTGGTCTGTGCTCC-CAGGGT-CCTG-GGACACAGAAGTTTGTGCAGCAACTTTTTCCAGCA-TGAAG-TGAC-TTG---CATCCAGGCTCCAGAGAAGAGGTTCATCCATCT------------TGC-CAGGATGACGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47574167 142 + 47698779 TCCCG--GGCCCC-GATTGGCT-GA-CGAGAAGGAGCCTCCCCAGAGC-CCCG-AGACACAGAACTTTGTGTGGCAACTTTTTACCGCA-TGATG-TGACTGTG---TGTCCAGGCTTCGGAGTGAAGGTGTGCCCGCCC------------AGC-CAGGATGACGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 211644 136 - 397369 TCCCT--GGCCGCGGATTGGCTGGG-TGCAGAAGGG--CCCCCACGGC-TCCG-GGACCCAGAAGTTTGTGCAGCAAC-TTTTCCAGCG-TGAAG-TGCC-TCGGCCCGG-----CTCCAGCGTGGAGGTGCGCCT-GCC------------AG--CAGGATGAGGC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=442482.000000 s hg38.chr20_KI270870v1_alt 69127 23 + 183433 TCTGCGGGACCTTCCTGGGTGCG s panTro5.chr20 123464 23 - 66533130 TCTGCGGGACCTTCCTGGGTGCG i panTro5.chr20 n 28 I 3272 s panPan2.chr20 62074274 23 + 62195757 TCTGCGGGACCTTCCTGGGTGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459523 23 - 578057 TCTGCGGGACCTTCCTGGGTGCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988302 23 - 110113093 TCTGCGGGACCTTCCTGGGTGCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714814 23 - 92844088 TCTGCGGGATCTTCCTGGGTGCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382796 23 + 96509753 TCTGCGGGATCTTCCTGGGTGCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853019 23 - 16982598 TCTGCGGGATCTTCCTGGGTGCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655296 23 - 3785965 TCTGCGGGATCTTCCTGGGTGCG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40408 23 - 179258 TCTGCGGGATCTTCCTGGGTGCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526333 23 - 5823884 TCTGCGGGATCTTCCTGGGTGCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8272 23 + 372756 TCTGCGGGAACTTCCTGGGTGCG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246876 23 + 16356641 TCTGCGGGACCTTCCTGGGTGCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115196 23 + 1231380 TCTGCGGGACCTTCCTGGGTGCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644525 23 + 11732439 TCTGCGGGACCTTCCTGGGTGCG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56829286 23 + 57149010 TCTGCGGGATCTTCCTGGGTGCG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1823447 23 - 2029793 TCTGCGGGATCGTCCTGGGTGCG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22806200 23 + 22939663 TCTGCGGGATCTTCCTGGGTGCG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763402 23 + 182113224 TCTGCGGGAGCTTCCTGGGTGCG i mm10.chr2 C 0 C 0 s canFam3.chr24 47574309 23 + 47698779 TCTGCGGGACCTTCCTGGGTGCG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 211780 23 - 397369 TCTGCAGGACCTTCCTGGGTGCG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=1871923.000000 s hg38.chr20_KI270870v1_alt 69150 138 + 183433 TACC-AC-CCCCAGCCCCTCGCGTCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CGAAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCCCTCAGAGC-TCAGTGCTCTT--TTCTGGGCAGCCAAGGAGGTGACAGAC-A s panTro5.chr20 66393976 138 + 66533130 TACC-A--CCCCAG-CCCTCGCGTCCCTCGTGA-GTTGCTTCACAAGTTTCTGCCGAAGATGCCAAAGGGACTAATTAGCTGTGT-TGT-CCCCCCTCAGAGCGTCAG-GCTCTTTGTTCTGGACAGCCCAAGAGGTGACAGACAA i panTro5.chr20 I 28 C 0 s panPan2.chr20 62074297 138 + 62195757 TACC-AC-CCCCAGCCCCTCGCGTCCCTCCGTG-GTCTGTTCACAAGTTTCTG-CGAAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCCCTCAGAGC-TCAGTGCTCTT--TTCTGGGCAGCCAAGGAGGTGACAGAC-A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459546 138 - 578057 TACC-AC-CCCCAGCCCCTCGCGTCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CGAAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCCCTCAGAGC-TCAGTGCTCTT--TTCTGGGCAGCCAAGGAGGTGACAGAC-A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988325 137 - 110113093 TACC-AC-CCCCAGCCCCTCGCA-CCCTCCCTG-TTCTGTTCACAAGTTTCTG-TGAAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCCATCGGAGC-TCAGTGCTCTT--TTCTGGGCAGCCGAGGAGGTGACAGAC-A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714837 138 - 92844088 TACC-AC-CCCCAGCCCCTCGCATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CGAAGATGCCAAAGGGACTAATTGGCTGTGTGTGTCCCCCCATCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCGAGGAGGTGACAGAC-A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382819 138 + 96509753 TACC-AC-CCCCAGCCCCTCGCATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CGAAGATGCCAAAGGGACTAATTGGCTGTGTGTGTCCCCCCATCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCGAGGAGGTGACAGAC-A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853042 138 - 16982598 TACC-AC-CCCCAGCCCCTCGCATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-TGAAGATGCCAAAGGGACTAATTGGCTGTGTGTGTCCCCCCATCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCGAGGAGGTGACAGAC-A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655319 138 - 3785965 TACC-AC-CCCCAGCCCCTCGCATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-TGAAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCCATCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCGAGGAGGTGACAGAC-A i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40431 138 - 179258 TACC-AC-CCCCAGCCCCTCGCATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CGAAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCCATCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCGAGGAGGTGACAGAC-A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526356 138 - 5823884 TACC-AC-CCCCAGCCCCTCGCATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CGAAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCCATCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCGAGGAGGTGACAGAC-A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8295 138 + 372756 TACT-GC-CCCCAGCCCCTCACATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CTAGGATGCCAAAGGGACTAATTAGCTGTGTGTCCCCCCCAATCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCAAGGAGGTGACAGAC-A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16246899 138 + 16356641 TACC-GC-CCCCAGCCCCTCGCATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CTGAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCAATCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCAAGGAGGTGACAGAC-A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115219 138 + 1231380 TACC-GC-CCCCAGCCCCTCGCATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CTAAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCAATCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCAAGGAGGTGACAGAC-A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644548 138 + 11732439 TACC-GC-CCCCAGCCCCTCGCATCCCTCCCTG-GTCTGTTCACAAGTTTCTG-CTAAGATGCCAAAGGGACTAATTAGCTGTGTGTGTCCCCCAGTCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCAAGGAGGTGACAGAC-A i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56829309 133 + 57149010 TACC-A--CCCCAGCCCCGGCA--CCCTCCCTG--CCTGCTCAC-TGTTTCTG-CTGAGATGCCAAAGGGGCTAATCAGCGATGCGTGTCTTCCCACCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCCCAGGAGGTGACAGAC-A i micMur3.chr18 C 0 I 407 s proCoq1.NW_012150197v1 1823470 134 - 2029793 TACC-A--CCCCAGCCCCCGCA--CCCTCCCCG--CCTGCTCACATGTTTCTG-CTGAGATGCCAAAGGGACTAATTAGCGGTGCGTGTCCTCCCACCAGTGC-TCAGTGCTCTT--TTCTGGGCAGCTGAGGAGGTGACAGAC-A i proCoq1.NW_012150197v1 C 0 I 2 s otoGar3.GL873542 22806223 136 + 22939663 TACC-A--CCCTAGCCCCTCAAACCCCTCCTGG--CCTGCTCACACCTTTCTG-CTAAGACGCCAAAGGGACTAATTTGTGATGTGGGTCCCCTCACCAGTGC-TTGGTGTTCTT--TTCTGGGCAGCTGAGGAGGTAATAGAC-A i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181763425 104 + 182113224 TACC-AT-CCCCAGCCCCTTGCACCTCTCCCCA-GGCTGTTCATAG--TTCTG-CCGGGATGC-----------------------------CCTGTCAGTGC-TCAGTGTTCTT--TTCTGG---GGTGAAAAAGTGATAGAC-A i mm10.chr2 C 0 I 2 s canFam3.chr24 47574332 134 + 47698779 TACC-TCTCCCCAGCCCTGCACACCCCTCCCTGGGCCTGCTCACACATTGCTG-CCCGGACACCAAAGGGACTAATTAGCTGTGTGT------CCGTCAGCAC-CCAGTGTTCTT--TTCTGGGCAGCCGAGGAGGTGATAGAC-A i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 211803 130 - 397369 TACCTGC-CCGCAGCCC-------CGCCCCCCG-CCCCCTTCACGGGGCTCTG-GGGAGAGGCC-AGGGCACCGAGGAGCTGTGCCCCCCTCCCTCTC-GCGC-CCAGTGCTCCC--TTCTGGGCATGCAAGGAGGTGACAGAC-A i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=797364.000000 s hg38.chr20_KI270870v1_alt 69288 97 + 183433 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACAG-CCACCTCCCCTTCTAGCGGATCCCGTGGCTTG--CAGAAGTG-CTGACGGCACAGAGCC s panTro5.chr20 66394114 98 + 66533130 TGCTCACCCCTG----AACAATGGCCAGGGCCC--GGGCAAACAGCCCACCTCTCCTGTCTGC-GATCCTGTGGCTTGCCCAGAAGTGCCTGACGCCACAAGCGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074435 97 + 62195757 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACAG-CCACCTCCCCTTCTAGCGGATCCTGTGGCTTG--CAGAAGTG-CTGACGGCACAGAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459684 97 - 578057 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACAG-CCACCTCCCCTTCTAGCGGATCCTGTGGCTTG--CAGAAGTG-CTGACGGCACAGAACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988462 97 - 110113093 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACAG-CCACCTCCCCTTCTAGCGGATCCTGTGGCTTG--CAGAAGTG-CTGACGGCACACAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92714975 97 - 92844088 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACTG-CCACCTCCTCTTCTAGCGGATCCTGTGGCTTG--CAGAAGTG-CTGACGGCTCAGAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96382957 97 + 96509753 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACTG-CCACCTCCTCTTCTAGCGGATCCTGTGGCTTG--CAGAAGTG-CTGACGGCTCAGAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853180 97 - 16982598 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACTG-CCACCTCCTCTTCTAGCGGATCCTGTGGCTTG--CAGAAGTG-CTGACGGCTCAGAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655457 97 - 3785965 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACTG-CCACCTCCTCTTCTAGCGGATCCTGTGGCTTG--CAGAAGTG-CTGACGGCACAGAGCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40569 97 - 179258 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACTG-CCACCTCCTCTTCTAGCAGATCCTGTGGCTTG--CAGAAGTG-CTGACGGCACAGAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526494 97 - 5823884 TGCTCCCTCCTG----AACAATGGCCAGGGCCCCTGGGGAAACGG-CCACCTCCTCTTCTAGCGGATCCTGTGGCTTG--CAGAAGTG-CTGACGGCACAGAGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8433 83 + 372756 TGCTCCCTCCTGAACAAACAACAGCCAGGGCCTC-GGGAAAACAG-CCGCCTCCCCTTCTTGAGGACCCTGTGGCTTG--CAGA------------------GCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16247037 83 + 16356641 CGCTCCCCCCAGAACAAACAACAGCCCGGGCCTC-GGGAAAACAG-CTACCTCCCCTTCTCGAGGACCCTGTGGCTTG--CAGA------------------GCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115357 76 + 1231380 TGCTCCCTCCTGAACAAACAACAGCCA--------GGGAAAACAG-CCGCCTCCCCTTCTCGAGGACCCTGTGGCTTG--CAGA------------------GCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644686 82 + 11732439 TGCTCCCTCCTGAACAAACAACAGCCGGGGCCTC-GGG-AAACAG-CCGCCTCCCCTTCTGGAGGACCCTGTGGCTTG--CAGA------------------GCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1823606 95 - 2029793 TGGTCCCTCCCG----AAC-ACAGCCAGGGCCCTTTGGGGAGGGG-CCGCCTCCCCTTCCGGCGGGTCCTGC-GCTTG--CAGAAGTT-CTGACGGCTCAGAGCC i proCoq1.NW_012150197v1 I 2 I 1 s otoGar3.GL873542 22806361 70 + 22939663 TGGTCGCTCCTG----AAAGACAGCCAGGGCCCCTCAGGAAAGGG-CTGCCTCCCCTTCGAG-----------GCTTG--CAGAAGCC----------------- i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181763531 78 + 182113224 TACTC-CTCTTG----AATGCCAGCCAGAGACCCTGGGGACATC--TTGGGTCCCTTTCG-----------------G--CAGAGGTG-CTGACAGCCCAGAACC i mm10.chr2 I 2 C 0 s canFam3.chr24 47574468 86 + 47698779 TGCTGCCTCCTG----AGCGA-GGCCAGGCTCTTTGGC----CCG-ATGCCTCTCCCTCCAGCTGACTGTGTGGCTTG--CAGAGCTG-------TCAAGGCGCC i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 211933 97 - 397369 TGTTCCCTCCTG----GGCAGGGGCCAGGACCCCCGAAAACACCG-GGCATTCTTCCCCCAGCTGACCATGTGACCCG--CGGGCTCA-CCCCCTGCGCAGAGCC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829442 407 + 57149010 I a score=306818.000000 s hg38.chr20_KI270870v1_alt 69385 32 + 183433 --------------CTGT--GAACG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT s panTro5.chr20 66394212 34 + 66533130 --------------CTGT--GAACG--CTGC----CCCTTGC-------------------AGAAGGTTGGAGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074532 32 + 62195757 --------------CTGT--GAACG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459781 32 - 578057 --------------CTGT--GAACG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988559 32 - 110113093 --------------CTGT--GAACG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715072 32 - 92844088 --------------CTGT--GAACG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383054 32 + 96509753 --------------CTGT--GAACG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853277 32 - 16982598 --------------CTGT--GAATG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655554 32 - 3785965 --------------CTGT--GAACG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40666 32 - 179258 --------------CTGT--GAACG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526591 32 - 5823884 --------------CTGT--GAACG--CTGC----CC--TGC-------------------AGAAGGTTGGAGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8516 32 + 372756 --------------CTGT--GAACA--CTGC----CC--CAT-------------------GGAAGGTTGGAGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16247120 32 + 16356641 --------------CTCT--GAACG--CTGC----CC--CAC-------------------GGAAGGTTGGAGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115433 32 + 1231380 --------------CTGC--GAACG--CTGC----CC--CAT-------------------GGAAGGTTGGAGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644768 32 + 11732439 --------------CTGT--GAACG--CTGC----CC--CAC-------------------GGAAGGCTGGAGGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22806431 31 + 22939663 --------------CAGT--GAAGG--CTGC----CC--TGA-------------------CAAAGGCTGAATA- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763609 36 + 182113224 --------------CTGT--GAAAG--CCTCACAGCT--TAC-------------------CCATGGTTGGAAGT i mm10.chr2 C 0 I 1 s canFam3.chr24 47574554 53 + 47698779 --------------CCGTTCGCCCG--CTGG----CT--CGCTCGCTCGTGGGCTTGCCTTCCAAGGTTGAAGGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 212030 47 - 397369 CTGTCCAGGGCTGCCTGT--CGCCGACTCGC----CC--TCT-------------------GGAAGGCTGGAGT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1823701 1 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829442 407 + 57149010 I a score=341744.000000 s hg38.chr20_KI270870v1_alt 69417 36 + 183433 GGGAGGGCGGTGGGCAGGGTGTGTGCAGAGGCCAGC------- s panTro5.chr20 66394246 34 + 66533130 GGGAGGGCGTCTGGCAGGGTGTGT-CA-AGGCCAGC------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074564 36 + 62195757 GGGAGGGCGGTGGGCAGGGTGTGTGCAGAGGCCAGC------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459813 36 - 578057 GGGAGGGCGGTGGGCAGGGTGTGTGCAGAGGCCAGC------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988591 36 - 110113093 GGGAGGGCGGTGGGCAGGGTGTGTGCAGAGGCCAGC------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715104 36 - 92844088 TGGAGAGTGGTGGGCAGGGTGTGTGCAGAGGCCAGT------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383086 36 + 96509753 TGGAGAGTGGTGGGCAGGGTGTGTGCAGAGGCCAGT------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853309 36 - 16982598 TGGAGAGTGGTGGGCAGGGTGTGTGCAGAGGCCAGT------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655586 36 - 3785965 TGGAGAGTGGTGGGCAGGGTGTGTGTAGAGGCCAGT------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40698 36 - 179258 TGGAGAGTGGTGGGCAGGGTGTGTGCAGAGGCCAGT------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526623 36 - 5823884 TGGAGAGTGGTGGGCAGGGTGTGTGCAGAGGCCAGC------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8548 21 + 372756 GGGAGGGTGGTGGGCAGGGT---------------C------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16247152 36 + 16356641 GGGAGGGTGGTGGGCAGGGTGTGTGCAGATGCCAGC------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115465 36 + 1231380 GGGAGGGTGGTGGGCAGGGTGTGTGCAGATGCCAGC------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644800 36 + 11732439 GGGAGGGCGGTGGGCAGGGTGTGTGCAGATGTCAGC------- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1823702 36 - 2029793 GGGAGGGCGGTGGGCAGGGTGTCTGCAGGTGCCAGC------- i proCoq1.NW_012150197v1 I 1 I 236 s otoGar3.GL873542 22806462 35 + 22939663 GGGAGGGTGGT-GGCAGGGTATCTGCAGGTGCTAGC------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763646 26 + 182113224 GGGTGGATGGTGGGTAGCGAGCCTGC----------------- i mm10.chr2 I 1 C 0 s canFam3.chr24 47574607 29 + 47698779 --GAGGACAGTGGGTGGGG-GTGCCCAGACGC----------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 212077 40 - 397369 GGGGGCTCGGAGGGTGGGGCG---GCGAGGGGCTGTGCTCTGC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829442 407 + 57149010 I a score=703898.000000 s hg38.chr20_KI270870v1_alt 69453 116 + 183433 TGGGCC---TTCTTTCTGTTGA--------TTTACCTGCC---TG-------GATCTGCCTGG-----CAGGCCATATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG--AGCAAGGC-------TCTGTGAGACTCTG-TGAGAA-GGT-GG s panTro5.chr20 66394280 118 + 66533130 TGGGCC----TCTTTCTGTTGA--------TTTACCTGCC---CG-------GATCTGCTGGG-----CAGGCCATATACGCTGGGCGGGTGTCAAGGAGCCCTTG---CTGG--AGCCAAGC-------TCTGTGAGACTCTGCTGAGAATGGT-GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074600 116 + 62195757 TGGGCC---TTCTTTCTGTTGA--------TTTACCTGCC---CG-------GATCTGCCTGG-----CAGGCCATATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG--AGCAAGGC-------TCTGTGAGACTCTG-TGAGAA-GGT-GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459849 116 - 578057 TGGGCC---TTCTTTCTGTTGA--------TTTACCTGCC---CG-------GATCTGCCTGG-----CAGGCCATATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG--AGCAAGGC-------TCTGTGAGACTCTG-TGAGAA-GGT-GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988627 116 - 110113093 CGGGCC---TTCTTTCTGTTGA--------TTTACCTGCC---CA-------GATCTGCCCAG-----CAGGCCATATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG--AGCAAGGC-------TCTGTGAGACTCTG-TGAGAA-GGT-GG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715140 108 - 92844088 CAGGCC---TTCTTTCTGGTGA--------TTTACCTGCC---CA-------GATCTGCCTAG-----CAGGCCATATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG-CAGCAAGGC-------TCTG-----------TGAGAA-GGTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383122 108 + 96509753 CAGGCC---TTCTTTCTGGTGA--------TTTACCTGCC---CA-------GATCTGCCTAG-----CAGGCCAAATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG-CAGCAAGGC-------TCTG-----------TGAGAA-GGTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853345 108 - 16982598 CAGGCC---TTCTTTCTGGTGA--------TTTACCTGCC---CA-------GATCTGCCTAG-----CAGGCCATATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG-CAGCAAGGC-------TCTG-----------TGAGAA-GGTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655622 108 - 3785965 CAGGCC---TTCTTTCTGGTGA--------TTTACCTGCC---CA-------GATCTGCCTAG-----CAGGCCATATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG-CAGCAAGGC-------TCTG-----------TGAGAA-GGTGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40734 108 - 179258 CAGGCC---TTCTTTCTGGTGA--------TTTACCTGCC---CA-------GATCTGCCTAG-----CAGGCCATATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG-CAGCAAGGC-------TCTG-----------TGAGAA-GGTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526659 107 - 5823884 CAGGCC---TTCTTTCTGGTGA--------TTTACCTGCC---CA-------GATCTGCCTAG-----CAGGCCATATA-GCT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG-CAGCAAGGC-------GCTG-----------TGAGAA-GGT-GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8569 98 + 372756 CAGGCC---TCCTTTCTGTTGA--------TTGACCTGCC---CA-------G---------------CGGGCCAGTCA-ACT-GGCGGGTGTC-GGGAGCCCTTGGC-CGGG-CAGCAAGGC-------TCTG-----------TGAGAA-GGTGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16247188 108 + 16356641 CAGGTC---TCCTTTCTGTTGA--------TTTACCTGCC---CA-------GACCTGCCCCT-----CGGGCCAGTCA-ACT-GGTGGGTGTT-GGGAGCCCTTGGC-TTGG-GAGCAAGGC-------TCTG-----------TGAGAA-GGTGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115501 108 + 1231380 CAGGCC---TCCTTTCTGTTGA--------TTTACCTGCC---CA-------GACCTGCCCAG-----CGGGCCAGTCA-ACT-GGTGGGTGTC-AGGAGCCCTTGGC-CTGG-CAGCAAGGC-------TCTG-----------TGAGAA-GGTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644836 108 + 11732439 CGGGCG---TCCTTTCTGCCGA--------TTTACCTGCC---CA-------GACCTGCCCAG-----CGGGCCAGTCA-ACT-GGTGGGTGTC-GGGAGCCCTTGGC-CTGG-CAGCAAGGC-------TCTG-----------TGAGAA-GGTGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22806497 109 + 22939663 CAGGTC---TCC--TCAGCTAA--------CTGACCTGCCTCTTA-------GGTGTGCCTAG-----TGGGTAGTGCA-GCC-AG-GGGTGTC-AGGAAACCCTGGC-CCAGGCAGCAAGGC-------TCTG-----------TGGGGA-GGTAGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763672 88 + 182113224 -------------TTGTATCTT--------TGTTTCTGTT---TA-------GGACTGC-TGG-----CTGGCCAACTG-AGG-GAGAGATACT-AGCAACCCCTGAT-CCAG-----GAGGC----------------------TGGGAA-AGTGG- i mm10.chr2 C 0 I 72 s canFam3.chr24 47574636 42 + 47698779 -------------------------------------------------------------------------------------AGGGCCGCC-GCGAGGCCTGGGA-GAGG-TGGGA--------------------------TGGAAA-GACGG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 212117 138 - 397369 TGAGCCACCCCCGTTCAGGTAAGGGCGAGGTGTGTCCCCT---CACACCCTCGACCTGCGTGTGTGCCCGGAACGACCA-TCT-GGGACCCACC-GGGGCTCCTGCACACCTG-CACCAAGGTCAGCGGGTGTG-----------TGAAAC-AGTCA- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1823738 236 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829442 407 + 57149010 I a score=495718.000000 s hg38.chr20_KI270870v1_alt 69569 86 + 183433 C-----------AGAGAGAATGTGTG--TgcgcgcgcgcgtgcgcgcgAC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCCAGGGCCG s panTro5.chr20 66394398 88 + 66533130 CG----------AGAGAGAATGTGTG--TGCGCGC-CGCG-GCGCTGGACAGAGATGCT-CCCGTCTGGGACTTA-ACTGTAGCTAA-GGGCTTTGGTCAGGG-CG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074716 80 + 62195757 C-----------AGAGAGAATGTGTG--TGCGCGC------GCGCGCGAC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCCAGGGCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 459965 70 - 578057 C-----------AGAGAGAATGTGTG--TGC----------------GAC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCCAGGGCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988743 70 - 110113093 C-----------AGAGAGAATTTGTG--TGT----------------GAC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCCAGGGCCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715248 70 - 92844088 C-----------AGAGAGAATCTGTG--TGT----------------GGC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCTGGGGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383230 70 + 96509753 C-----------AGAGAGAATCTGTG--TGT----------------GGC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCTGGGGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853453 70 - 16982598 C-----------AGAGAGAATCTGTG--TGT----------------GGC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCTGGGGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655730 70 - 3785965 C-----------AGAGAGAATCTGTG--TGT----------------GGC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCTGGGGCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40842 70 - 179258 C-----------AGAGAGAATCTGTG--TGT----------------GGC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCTGGGGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526766 70 - 5823884 C-----------AGAGAGAATTTGTG--TGT----------------GGC--AGATG-T-CCC--CTGGGACTTA-ACTGTAGCTAAGGGGCTTTGGCCGGGGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8667 69 + 372756 C-----------AGAGAGAATCCGTG--TGT----------------GAC--AGATG-T-CTC--CTGGGACTT--ACTGTAACTCAGGGGCTTTGGCCGGGGCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16247296 69 + 16356641 C-----------AGAGAGAATCTGTG--TGT----------------GAC--AGATG-T-CCC--CTGCGACTT--ACTGTAACTCAGGGGCTTTGGCTGGGGCCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115609 68 + 1231380 C-----------AGAGAGAATCCGTG--TGT----------------GAC--AGATG-T-CGC--CTGGGACTT--ACTGTAACTCAGGGGC-TCGGCCGGGGCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2644944 69 + 11732439 C-----------AGCGAGAATCCGTG--TGT----------------GAC--CGACG-T-CCC--CTGGGACTT--ACTGTAACTCGGGGGCTTCGGCCAGGGCTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22806606 51 + 22939663 T-----------GGAGAGACTGTGTGCATGT----------------GAC--AGATG-T-CCC--CTC--------------------GGGCTTTGTCTGGGG--G i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47574678 66 + 47698779 ------------------CATGTGTG--TGCGGT-------------GAC--CGACG-TGCAC--CTGCGACTC--GCTCTGGTGAAGAGGCTTTGGCTGGCACGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 212255 65 - 397369 -CCCAGTGTTTGAGCAAGAGTTTGTG--TGT----------------GTT--------T-ACC--CTG---TTCACACAGTGTCAGAAAGGGTTTGTG-------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1823738 236 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181763760 72 + 182113224 I e micMur3.chr18 56829442 407 + 57149010 I a score=93508.000000 s hg38.chr20_KI270870v1_alt 69655 14 + 183433 CTGCTGCTTG-CGTC-- s panTro5.chr20 66394486 13 + 66533130 C-GCTGCTTG-CGTC-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074796 14 + 62195757 CTGCTGCTTG-CGTC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460035 14 - 578057 CTGCTGCTTG-CGTC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988813 14 - 110113093 CTGCTGCTTG-CGTC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715318 14 - 92844088 CCGCTGCTTG-TGTC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383300 14 + 96509753 CCGCTGCTTG-TGTC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853523 14 - 16982598 CCGCTGCTTG-TGTC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655800 14 - 3785965 CCGCTGCTTG-TGTC-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40912 14 - 179258 CCGCTGCTTG-TGTC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526836 14 - 5823884 CCGCTGCTCG-TGTC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 8736 13 + 372756 CT-CAGCTTG-CGTC-- i calJac3.chrUn_GL286459 C 0 T 947 s saiBol1.JH378156 16247365 13 + 16356641 CT-CAGCTTG-CATC-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115677 13 + 1231380 CT-CAGCCTG-CGTC-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2645013 13 + 11732439 CT-CAGCTTG-CGTC-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22806657 14 + 22939663 CTACTGCCTG-TGTC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763832 14 + 182113224 CTGCTAGGTA-CATC-- i mm10.chr2 I 72 C 0 s canFam3.chr24 47574744 14 + 47698779 CTGCTGTTTG-GGTT-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 212320 13 - 397369 ----TGTCTGATGGCTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1823738 236 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829442 407 + 57149010 I a score=640980.000000 s hg38.chr20_KI270870v1_alt 69669 76 + 183433 CTCATCACACTCAAAGTTGC-------TGTGTGTG------TGAGTGCAC----------------------------------GTGTGTGAG--------------------TGT----GCATAT---------------------GTATGTGAGGG-------------------------------TCTCACAAAC s panTro5.chr20 66394499 76 + 66533130 CTCATCACACTCAAAGTTGC-------TGTGTGTG------TGAGTGCAC----------------------------------GTGTGTGAG--------------------TGT----GCATAT---------------------GTATGTGAGGG-------------------------------TCTCACAAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074810 76 + 62195757 CTCATCACACTCAAAGTTGC-------TGTGTGTG------TGAGTGCAC----------------------------------GTGTGTGAG--------------------TGT----GCATAT---------------------GTATGTGAGGG-------------------------------TCTCACAAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460049 76 - 578057 CTCATCACACTCAAAGTTGC-------tgtgtgtg------tgagtgcac----------------------------------gtgtgtgag--------------------tgt----gcatat---------------------gtatgtgAGGG-------------------------------TCTCACAAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988827 74 - 110113093 CTCATCACACTCAAAGTTAC---------tgtgtg------tgagtgcac----------------------------------atgtgtgag--------------------tgt----gcatgt---------------------gtatgtgaggg-------------------------------tCTCACAAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715332 74 - 92844088 CTCATCACACTCAAAGTTGC---------tgtgtg------tgagtgcat----------------------------------gtgtgtgag--------------------tgt----gcatgt---------------------gtgtgtgAGGG-------------------------------TCTCACAAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383314 74 + 96509753 CTCATCACACTCAAAGTTGC---------tgtgtg------tgagtgcat----------------------------------gtgtgtgag--------------------tgt----gcatgt---------------------gtgtgtgAGGG-------------------------------TCTCACAAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853537 74 - 16982598 CTCATCACACTCAAAGTTGC---------tgtgtg------tgagtgcat----------------------------------gtgtgtgag--------------------tgt----gcatgt---------------------gtgtgtgAGGG-------------------------------TCTCACAAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655814 74 - 3785965 CTCATCACACTCAAAGTTGC---------tgtgcg------tgagtgcat----------------------------------gtgtgtgag--------------------tgt----gcatgt---------------------gtgtgtgAGGG-------------------------------TCTCACAAAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 40926 74 - 179258 CGCATCACACTCAAAGTTGC---------tgtgcg------tgagtgcat----------------------------------gtgtgtgag--------------------tgt----gcatgt---------------------gtgtgtgAGGG-------------------------------TCTCACAAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526850 74 - 5823884 CTCATCACACTCAAAGTtgc---------tgtgcg------tgagtgcag----------------------------------gtgtgtgag--------------------tgt----gcatgt---------------------gtgtgtgAGGG-------------------------------TCTCACAAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 7802 73 + 372756 CTCATCACACTCAGAGTTGC---------TGTGTG------ATAGTGTAC----------------------------------GTGTGTGAG--------------------TGT----GTATGT---------------------G-ATGTGAGGG-------------------------------TCTCTCAAAC i calJac3.chrUn_GL286459 T 947 I 1438 s saiBol1.JH378156 16247378 79 + 16356641 CTCATCACACTCAGAGTTGC-------TGTGTGTG------AAAGTGCAC----------------------------------GTGTGTGTG--------------------CGTGCGCGCACGT---------------------G-ATGTGAGGG-------------------------------TCTCACAAAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115690 75 + 1231380 CTCATTGCACTCAGAGTTGC-------TGTGTGTG------AGAGTGCAC----------------------------------ATGTGTGAG--------------------TGT----GCACGT---------------------G-ATGCGAGGG-------------------------------TCTCACAAAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2645026 59 + 11732439 CTCATCGCACTCAGAGTTGC-----------------------------T----------------------------------GTGTGTGAG--------------------TGT----CCATGT---------------------G-ACGCGAGGG-------------------------------TCTCACAAAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22806671 72 + 22939663 CTCATCACACTCAAAGTCAC---------TGTGTG------TGAGCATGC----------------------------------ATGTGTGAG--------------------TGT------ATGC---------------------ACATGTGTGAG-------------------------------TCTCGCACAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763846 60 + 182113224 CTAATCACACTCACAGTTGC-----------------------------A----------------------------------GGGCATAAG--------------------TGT----GCATGT---------------------GTGTGAGGGAG-------------------------------TCTCATAAAC i mm10.chr2 C 0 I 3 s canFam3.chr24 47574758 189 + 47698779 CCCAGCACGTGCAGAGTTGCGTGTGCCTGTGCGTG------TGCGTGTGTCTGAAACATTAACACGGTGTTAGGGCAAGAGTCAGTGTGTGAGCCCCACAAAGTCCTCCCAAATGT----GCGTGTCTGAGTACGTGTGTTCACACCGTGTCAGAGGGTTGGTATGTCTGATGTCCCAGCATAAAACCATCTCACAATA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 212333 72 - 397369 AGCATGAAA--CAAACTCAC---------AATATGACACAAAGAGTGTAT----------------------------------GTGTGTGAG--------------------AGA-------------------------------GAGTGAGAAGG-------------------------------TCTTGCAACC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1823738 236 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829442 407 + 57149010 I a score=25158.000000 s hg38.chr20_KI270870v1_alt 69745 4 + 183433 TGGA s panTro5.chr20 66394575 4 + 66533130 TGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074886 4 + 62195757 TGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460125 4 - 578057 TGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988901 4 - 110113093 TGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715406 4 - 92844088 TGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383388 4 + 96509753 TGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853611 4 - 16982598 TGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655888 4 - 3785965 TGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41000 4 - 179258 TGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526924 4 - 5823884 TGGA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16247457 4 + 16356641 TGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115765 4 + 1231380 TGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2645085 4 + 11732439 TGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22806743 4 + 22939663 TGAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763909 1 + 182113224 T--- i mm10.chr2 I 3 C 0 s canFam3.chr24 47574947 3 + 47698779 TGG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 212405 4 - 397369 TGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1823738 236 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829442 407 + 57149010 I e calJac3.chrUn_GL286459 7875 1438 + 372756 I a score=122787.000000 s hg38.chr20_KI270870v1_alt 69749 9 + 183433 TGCCAAATG s panTro5.chr20 66394579 9 + 66533130 TGCCAAATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074890 9 + 62195757 TGCCAAATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460129 9 - 578057 TGCCAAATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988905 9 - 110113093 TGCCAAATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715410 9 - 92844088 TGCCAAACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383392 9 + 96509753 TGCCAAACG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853615 9 - 16982598 TGCCAAACG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655892 9 - 3785965 TGCCAAACG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41004 9 - 179258 TGCCAAACG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526928 9 - 5823884 TGCCAAACG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16247461 9 + 16356641 TGCCAAATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115769 9 + 1231380 TGCCAAATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2645089 9 + 11732439 TGCCAAGTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1823974 9 - 2029793 TGCCAAGTG i proCoq1.NW_012150197v1 I 236 C 0 s otoGar3.GL873542 22806747 9 + 22939663 TGCCAAATG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763910 9 + 182113224 TGCCAAATG i mm10.chr2 C 0 C 0 s canFam3.chr24 47574950 7 + 47698779 --CCCAgtg i canFam3.chr24 C 0 I 16 s dasNov3.JH569290 212409 9 - 397369 TGCCAAATG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56829442 407 + 57149010 I e calJac3.chrUn_GL286459 7875 1438 + 372756 I a score=3730591.000000 s hg38.chr20_KI270870v1_alt 69758 251 + 183433 TTTGTGAGCGTCTGCGTG-----------------AGTGTGAGA-CAGAAACACAAAGT-CAGCCCCGAGTGTGGCGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC s panTro5.chr20 66394588 247 + 66533130 TTTGTGAGCGTCTGCGTG-----------------AGTGTGAGAGCAGAAACACAAAGTCCAGCCCCGAGTGT-GTGGAGAGTGGATCCC-GTTTTGTTTGCTCCATC-GCCAGGGCC-GCCTGGGGCAGCA----CCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGCGCCTAAATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGC-GGGAGG--TTCAGAAGGAAACAAGAAAACCCTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62074899 251 + 62195757 TTTGTGAGCGTCTGCGTG-----------------AGTGTGAGA-CAGAAACACAAAGT-CAGCCCCGAGTGTGGTGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460138 251 - 578057 TTTGTGAGCGTCTGCATG-----------------AGTGTGAGA-CAGAAACACAAAGT-CAGCCCCGAGTGTGGCGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-G-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCAGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109988914 251 - 110113093 TTTGTGAGTGTCTGCGTG-----------------AGTGTGAGA-CAGACACACAAAGT-CAGCCCCGAGTGTGGCGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715419 249 - 92844088 TTTGT--GTGTCTGCGTG-----------------AGTGTGAGA-CAGAAACACAGAGT-CAGCCCCGAGTGTGGCGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAACATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383401 249 + 96509753 TTTGT--GTGTCTGCGTG-----------------AGTGTGAGA-CAGAAACACAGAGT-CAGCCCCGAGTGTGGCGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAACATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853624 249 - 16982598 TTTGT--GTGTCTGCGTG-----------------AGTGTGAGA-CAGAAACACAAAGT-CAGCCCCGAGTGTGGCGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGCAAACCCTCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3655901 251 - 3785965 TTTGTGAGTGTCTGCGTG-----------------AGTGTGAGA-CAGAAACACAAAGT-CAGCCCCGAGTGTGGCGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41013 251 - 179258 TTTGTGAGTGTCTGCGTG-----------------AGTGTGAGA-CAGAAACACAAAGT-CAGCCCCGAGTGTGGCGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5526937 251 - 5823884 TTTGTGAGTGTCTGCGTG-----------------AGTGTGAGA-CAGAAACACAAAGT-CAGCCCCGAGTGTGGCGGAGAGTGGATCCCGGTTTTGTTTGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAAGAAACAAGAAAACCCTCAC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16247470 250 + 16356641 TTTGTGAGTGTCTGCATG-----------------AGTGTGAGA-CAGAAACAC-AAGT-CAGCCCCGAGTGTGGCGGAGAGTGGGTCCCGGTTTTGTTTGCTCCATCTGCCAGGGCTGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCGGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1115778 251 + 1231380 TTTGTGAGTGTCTGCGTG-----------------AGTGTGAGA-CAGAAACACAAAGT-CAGCCCCGAGTGTGGCGGAGAGTGGGTCCCGGTTTTGTTTGCTCCATCTGCCAGGGCTGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCGGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2645098 249 + 11732439 TTCCTGAGTGTCTGCGTG-----------------AGTGTGAGA-CAGAAACA--AAGT-CAGCCCCGAGTGTGGCGGAGAGTGGGTCCCGGTTTTGTTTGCTCCATCTGCCGGGGCCGGCCTGGGGCAGCA---CCCCC--GCCCTCAGCTGTT-C-CATACAATATTAATGCTCACCATCTCGGC--CTCACACAACGGC-CCT-AATTGTCGTCTGCGGCATTAAGGCAGGCGCCCATCTGCAGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56829849 250 + 57149010 TTTGTGAGTTTCTGCATG-----------------AGTGTGAGA-CAGACACACAAAGT-CAGCCCAGAGTGTGGGTGAGAGTGGCTCCTGGTTTTGTTCGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCG---CCCCC--GCCCTCAGCTGTT-C-TATACAATATTAATGCTAACCATCTC-GC--CGCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i micMur3.chr18 I 407 C 0 s proCoq1.NW_012150197v1 1823983 250 - 2029793 TTTGTGAGTTTCTGCGTG-----------------AGTGTGAGA-CAGACACACAGAGT-CAGCCCAGAGTGTGGGTGAGAGGGGCTCCCGGTTTTGTTCGCTCCATCTGCCAGGGCCGGCCTGGGGCAGCG---CCCCC--GCCCTCAGCTGTC-C-TATACAATATTAATGCTAACCATCTC-GT--GGCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCGGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22806756 250 + 22939663 TTTGTGTGTTTCTGCGAG-----------------AGTGTGAGA-CAGACACACAGAAT-CAGCCCAGAGTACGGGTGAGAGTCGCTCCTGGTTTTGTTCACTCCATCTGCCAGGGCCGGCCTGGGGCAGCG---CCCCC--GCCCTCAGCTGCT-C-TATACAATATTAATGCTAACCATCTA-GC--TGCACACAACGGC-CCT-AATTGTCGTCTGCAGCATTAAGGCAGGCGCCCATCTGCAGGGAAGCTTTCAGAAGGAAACAAGAAAACCCTCAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181763919 239 + 182113224 ------------TTTGCG-----------------AGTGTGAGA-CAAGCACACAAAGT-CAGCCTGGAGTGTGG-GTAAAGTGGCTCCTGGTTTTGTTTGCTCCATCTGCCAGGGCCTGCCTGGGGCAGCG---CCCCCCAGCCCTCAGCTGTT-C-TATACAATATTAATGCTGACCATCTCGGCTGCGCACACAAC-GC-CCT-AATTGTCGCCGGCAGCATTAAGGCAGGCGCCCATCTGC-GGGAAGCTTTCAGAAGGAAACAAGAAAA-CCTCAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47574973 274 + 47698779 tgtgtgtgtgtgtgtgtgAGGCTCACAACCTAGCAAGTGTGAGA-CAGGCGCACAGAGT-CAGCCCAGGGTGTTGGTGAGAGGGGCTCTCGGTTTTGTTTGCTCCATCTGCCAGAGCCTGCCTGGGGCAGCGGCCCCCTC--GCCCTCAGCTGTTCC-TATACAATATTAATGCTGACCATCTCGGCTCCGCACACAACGGC-CCT-AATTGTCGTCTGCAGCTTTAAGGCGGGCGCCCATCTGCAGGGAAGCTTTCAGAAGGAAACAAGAAAACTCTCAC i canFam3.chr24 I 16 C 0 s dasNov3.JH569290 212418 236 - 397369 TGTATGAGTCTGGGGAAG-----------------AGTGTAAGA-CAGGCACACAAAGT-CAGCCC-AAGTGTCAGCAAAAGTGGCTCCACGTTTTGTTTGCTCCATCTGCCAGG--CTGCCTGGGGCAGCG---CCCCCCAGGCCTCAGCTGCT-CGTATACAATATTAATGCTGACCATCTCACG--CGCTCAC-ACGGC-CCT-AATTGTCGT--------------CAGGCGCCCATCTGCAGGGAAGCTTTCAGAGGGAAACAAGGAAACCCTCGC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e calJac3.chrUn_GL286459 7875 1438 + 372756 I a score=3729669.000000 s hg38.chr20_KI270870v1_alt 70009 215 + 183433 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCTGCT---C-CCCCACTCACACAAAGCGCTTTCTCAGCGAG s panTro5.chr20 66394835 213 + 66533130 CCCCAGCTGGTCACCGGAGAAGGT-GTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTACTTTGAAAGAAGTTTTTATGAAGCAAATGAACTGACACTTGGAATGTTCTGT-TGCAGATTTGCACAAGTAAT--CACTTTATTTGAAATGATTTTA-C--AGCTAAGCGATCATTAAGCCTGCT---C-CCCCACTCACACAAAGCGCTTTCTCAGCGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075150 215 + 62195757 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCTGCT---C-CCCCACTCACACAAAGCGCTTTCTCAGCGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460389 215 - 578057 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCTGCT---C-CCCCGCTCACACAAAGCGCTTTCTCAGTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989165 215 - 110113093 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAGTGATCTTACC--AGCTAAGCGATCATTAAGCCTGCT---C-CCCCACTCACACAAAGCACTTTCTCAGCGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715668 209 - 92844088 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTG-AAG-AGTTTTTATGAAGCAAATGAACGGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTACGCCTGCT------CCCACTCACACAAAGCACT---GCAGTGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383650 213 + 96509753 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACGGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTACGCCTGCT------CCCACTCACACAAAGCACTTGCTCAGTGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16853873 213 - 16982598 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACGGACACTTGGAACG-TCTGTGTGCAGATTTGCACCAGTAATTACACTTTATTTGAGATGATCTTACC--AGCTAAGCGATCATTACGCCTGCT---C-CCCCACTCACACAAAGCACTTTCTC--TGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656152 215 - 3785965 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCTGCT---C-CCCCACTCACACAAAGCACTTTCTCAGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41264 215 - 179258 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCTGCT---C-CCCCACTCACACAAAGCACTTTCTCAGGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527188 215 - 5823884 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-CCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCTGCT---C-CCCCACTCACACAAAGCACTTTCTCAGTGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 9313 212 + 372756 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCTGCT---C-CCC-ACTCACACAAAGCACTT--CTAGTGAG i calJac3.chrUn_GL286459 I 1438 C 0 s saiBol1.JH378156 16247720 214 + 16356641 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCGGCT---C-CCC-ACTCACACAAAGCACTTTCTCAGTGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1116029 215 + 1231380 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCCGCT---C-CCCGACTCGCACAAAGCACTTTCTCAGTGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2645347 214 + 11732439 CCCCAGCTGGTCACCAGAGAAGGTGCTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCTGTT---C-CCCGGCTCACACAAAGCGCTCTCTCAGTGA- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56830099 216 + 57149010 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCTGCTT--C-CCCAGCTCACACAAAGCACTTGCGCAGGGAG i micMur3.chr18 C 0 I 26 s proCoq1.NW_012150197v1 1824233 216 - 2029793 CCCCAGCTGGTCACCGGAGAAGGTGGTGCCAATTACAGACGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACC--AGCTAAGCGATCATTAAGCCCGCTT--C-CCCAGCTCACACAAAGCACTTTCTTAGGGAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22807006 217 + 22939663 CCCCAGCTGGTCACTGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTACACTTTATTTGAAATGATCTTACT--AGCTAAGCGATCATTAAGCCTGCTT-CC-CCCAGCTCACACAAAGCACTTTCTTAGTGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181764158 216 + 182113224 CCCCAGCTGGTCACTGGAGAAGGTGGTGCCAATTACAGATGCAGAAAGTTTAGAACAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCGGATTTGCACAAGTAATTACACCTTATTTGAAATGATCCTACC--AGTTAAGCAACAATTAAGTCTGCT---CTCCCAGCGCACACAAAGCACTTTCCGAGTGAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47575247 217 + 47698779 CCCCAGCTGGTCACCGGAGAAGGT---GCCAATTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATGAAGCAAATGAACTGACACTTGGAATG-TCTGTGCGCAGATTTGCACAAGTAATTACATTTTATTTGAAATGATCTTACCCGCGCGAAGCGGTCATTAAGCCTGCTTCCC-CCCGATTCCCACAAAGCGCTTCCTTAGCTAG i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 212654 213 - 397369 -CCCAGCTGGTCACCGGAGAAGGTGGTGCCAACTACAGATGCAGAAAGTTTAGACCAAAATTAC-TTGAAAG-AGTTTTTATAAAGCAAATGAACTGACACTTGGAATG-TCTGTGTGCAGATTTGCACAAGTAATTGCACTTTATTTGGAGTGATCTTACC--AGCTCAGCGACGATTAAGCCTGCTTTGC-CCCAGCTCACACAAAG--CTTCCTCAGAG-- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=36692.000000 s hg38.chr20_KI270870v1_alt 70224 15 + 183433 ---TGCGGCTGCGGCGTA s panTro5.chr20 66395048 15 + 66533130 ---TGCGGCTGCGGCGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075365 15 + 62195757 ---TGCGGCTGCGGCGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460604 15 - 578057 ---TGCGGCTGCGGCGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989380 14 - 110113093 ---TGCGGCTGCGGC-TA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715877 13 - 92844088 ---T--GGCCGCCGCGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383863 15 + 96509753 ---TGCGGCCGCCGCGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854086 15 - 16982598 ---TGCGGCCGCCGCGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656367 15 - 3785965 ---TGCGGCCGCGGTGCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41479 15 - 179258 ---TGCGGCCGCGGCGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527403 15 - 5823884 ---TGCGGCCGCGGCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 9525 13 + 372756 ---TGCGGCTGCAGC--A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16247934 12 + 16356641 ---GGCGGCT-CAGC--A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1116244 13 + 1231380 ---TGCGGCCGCAGC--A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2645561 3 + 11732439 ------------AGC--- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1824449 15 - 2029793 ---CACCGCTGCGGCCGC i proCoq1.NW_012150197v1 C 0 I 12 s otoGar3.GL873542 22807223 15 + 22939663 ---CTCGGCTGCAGCCTG i otoGar3.GL873542 C 0 I 7 s mm10.chr2 181764374 13 + 182113224 ----CCGACAGCAGT-CA i mm10.chr2 C 0 I 1 s canFam3.chr24 47575467 10 + 47698779 ---TGCAGCCGCA----- i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 212867 15 - 397369 CCCGGCTGCCGCCGT--- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56830315 26 + 57149010 I a score=3116849.000000 s hg38.chr20_KI270870v1_alt 70239 273 + 183433 AGTTTGGTTTTGCAAATCTCCCGTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCGCCAGTCAGACAG---GAGTTATTTCCTGGTGGATCTTTCCAAACATATTATTAAAAAGTCACATGTGACTTTCCCACAGACTTTTATGAAATAAAACCCAAAGGAACAGCGTGCAACATGCTCAGTTATGGAAGAGAAAATATTTTATGATTTCAAAAAGTCCTGACAAATTTTCACCCTCTCTAA-GAAAGGAAGCTTAAGACT----ATACCTTGCTGTTGTCAC s panTro5.chr20 66395063 266 + 66533130 AG-TTGGTTTTGCAAATCTCCCGTTTCCCTCCCCGTGTGGAG-TCTGAGGACCC-CCAGTCAGACAG---GAG-TATTTGCTGGTGGATCTTTCCAAACATA-TATTAAAAAGTCACATGTGACTTT-CCACAGA--TTTATGAAATAAAACCACAAGAACAAGCGTGCAACATGCTCAGTTATGGAAGAGAAAATATTTTATGATTTCAATAAATCCTGACAAATTTTCACCCTCTCTAA-GAAAAGAAGCTTAAGACT----ATACCTTGCTGTTGTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075380 273 + 62195757 AGTTTGGTTTTGCAAATCTCCCGTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCGCCAGTCAGACAG---GAGTTATTTCCTGGTGGATCTTTCCAAACATATTATTAAAAAGTCACATGTGACTTTCCCACAGACTTTTATGAAATAAAACCCAAAGGAACAGCGTGCAACATGCTCAGTTATGGAAGAGAAAATATTTTATGATTTCAAAAAGTCCTGACAAATTTTCACCCTCTCTAA-GAAAAGAAGCTTAAGACT----ATACCTTGCTGTTGTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460619 273 - 578057 AGTTTGGTTTTGCAAATCTCCCGTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCGCCGGTCACACAG---GAGTTATTTCCTGGTGGATCTTTCCAAACATATTATTAAAAAGTCACATGTGACTTTCCCACAGACTTTTATGAAATAAAACCCAAAGGAACAGTGTGCAACATGCTCAGTTATGGAAGAGAAAATATTGTATGATTTCAAAAAGTCCTGACGAATTTTCACCCTCTCTAA-GAAAAGAAGCTTAAGACT----ATACCTTGCTGTTGTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989394 273 - 110113093 AGTTTGGTTTTGCAAATCTCCCGTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCGCCAGTCAGACAG---GAGTTATTTCCTGGTGGATCTTTCCAAACATATTATTAAAAAGTCACATGTGACTTTCCCACAGACTTTTATGAAATAAAACCCAAAGGAACAGTGTGCAACGTGCTCAGTTATGGAAGAGAAAATATTTTATGATTTCAAAAAGTCCTGACAAATTTTCGCCCTCTCTAA-GAAAAGAAGTTTAAGACT----ATACCTTGCTGTTGTCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92715890 268 - 92844088 AGTTCGGTTTTGCAAATCT-CCCTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCGCCAGTCAGACAG---GAGTTATTTCCTGGTGGATCTTTCCAAACATATTATGGAAAAGTCACATGTGAGTTTCCCACAGGTTTCTATGAAATAAAACCCGAAGGAACTA---ACCCCATGCTTAGTTATGGAAGAGAAAATATTTTATGGTTTC-AAAAGTCCTGACAAATTTTCACCCTCTCTAA-GAAAATAAGTTTAAGACT----ATACCTTGCTGTTGTCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96383878 268 + 96509753 AGTTCGGTTTTGCAAATCT-CCCTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCGCCAGTCCGACAG---GAGTTATTTCCTGGTGGATCTTTCCAAACATATTATGGAAAAGTCACATGTGAGTTTCCCACAGGCTTTTATGAAATAAAACCCGAAGGAACTA---ACCCCATGCTTAGTTATGGAAGAGAAAATATTTTATGGTTTC-AAAAGTCCTGACAAATTTTCACCCTCTCTAA-GAAAATAAGTTTAAGACT----ATACCTTGCTGTTGTCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854101 268 - 16982598 AGTTTGGTTTTGCAAATCT-CCCTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCGCCAATCAGACCG---GAGTTATTTCCTGGTGGATCTTTCCAAACATATTATGGAAAAGTCACATGTGAGTTTCCCACAGGTTTTTATGAAATAAAACCCGAAGGGACTA---ACCCCATGCTTAGTTATGGAAGAGAAAATATTTTATGGTTTC-AAAAGTCCTGACAAATTTTCACCCTCTCTAA-GAAAATAAGTTTAAGACT----ATACCTTGCTGTTGTCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656382 269 - 3785965 AGTTTGGTTTTGCAAATCTCCCCTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCGCCAATCAGACAG---GAGTTATTTCCTGGTGGATCTTTCCAAACATATTATGGAAAAGTCACATGTGAGTTTCCCACAGGTTTTTATGAAATAAAACCCGAAGGAACTA---ACCCCATGCTTAGTTATGGAAGAGAAAATATTTTATGGTTTC-AAAAATCCTGACAAATTTTCACCCTCTCTAA-GAAAATACGTTTAAGACT----ATACCTTGCTGTTGTCAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41494 269 - 179258 AGTTTGGTTTTGCAAATCTCCCCTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCGCCAATCAGACAG---GAGTTATTTCCTGGTGGATCTTTCCAAACATATTGTGGAAAAGTCACATGTGAGTTTCCCACAGGTTTTTATGAAATAAAACCCGAAGGAACTA---ACCCCATGCTTAGTTATGGAAGAGAAAATATTTTATGGTTTC-AAAAATCCTGACAAATTTTCACCCTCTCTAA-GAAAATAAGTTTAAGACT----ATACCTTGCTGTTGTCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527418 265 - 5823884 AGTTTGGTTTTGCAAATCTCCCCTTTCCCTCCCCGTGTGGAG-TCTGAGGACCCACCAATCAGACAG---GAGTTATTTCCTGGTGGATCTTTCTAAACGTATTATGAAAAAGTCACATGTGAGTTTCCCACAGGTTTTTATGAAATAAAACCCAAAGGAACTA---ACCCCATGCTTAGTTATGGAAGAGAAAA-----TATGATTTCAAAAAGTCCTGACAAATTTTCACCCTCTCTAA-GAAAATAAGTTTAAGACT----GTACCTTGCTGTTGTCGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 9538 269 + 372756 AGTTTGGTTTTGCAAATCTGCCCCTTCCCT-CCCGTGTGGAG-TCTGAGGACCTGCCAGTCCT-CAG---GAGTTATTTCCTGGTGTATCTTTCCCAACAT-TTATTAAAAAGTCACATGTGACTTTCCCACAGATTTCTATGAACTAAAACCCAAAGAAACAATGTGCGCCATGCCTAGTTATGGAAGAGAAAATATTTTATAATTTCAAAAATTCCTGACACATTTCCACCCTCTCTAA-GAAAA-AAGTTTAAGATT----ATACCTTGCTGTTGTCAC i calJac3.chrUn_GL286459 C 0 I 35 s saiBol1.JH378156 16247946 273 + 16356641 AGTTTGCTTTTGCAAATCTCGCCTTTCCCT-CCCGCGTGGAG-TCTGAGGACCCGCCAGTCAGACAG---GAGTTATTTCCTGGTGTATCTTTCCAAACAT-TTATTAAAAAGTCACATGTGACTTTCCCACAGATCTTTATGAAATAAAACCCAAAGAAACAATGTGCGCCGTGCCTAGTTATGGAAGAGAAAATACTTTATAA-TTCAAAAATGCCTGACACGTTTCCACCCTCTCTAA-GAAAG-CAGTGTGCGATCGATGATACCTTGCTGTTCTCAC i saiBol1.JH378156 C 0 I 34 s cebCap1.NW_016107870v1 1116257 270 + 1231380 AGCTTGGTTTTGCAAATGTCCCCTTTCCCT-CCCGTGTGGAG-TCTGAGGACCTGCCAGCCGGACAG---GAGTTATTTCCTGGTGTATCTTTCCAAACAT-TTATTAAAAAGTCACATGTGACTTTCCCACAGATTTTTATGAAATAAAACCCAAAGGAACAATGTGTGCCATGCCCAGTTATGGAAGAGAAAATATTTTATAATTTCAAAAATTCCTGACACATTTTCACCCTCTCTAA-GAAAA-AAGTTTAAGATT----ATACCTTGCTGTTGTCAC i cebCap1.NW_016107870v1 C 0 I 166 s aotNan1.NW_018500483v1 2645564 269 + 11732439 -GCTTGGTTTAGCAAATCTCCGCTTTCCCT-CCCGTGTGGAG-TCTGAGGACCCACCAGTCAGACGG---GAGTTATTTCCTGGTGCATCTTTCCAAACGT-TTATTAAAAAGTCACATGTGACTTTCCCACAGAATTTTATGAAATAAAACCCAAAGAAGCGCCGTGCGCCGTGCCTGGTTATGGGAGAGAAAATGTTTTATAATTTCAAAAATTCCTGACGCGTTTTCACCCTCTCTAA-GAAAA-GAGTTCACGATT----ATACCTCGCTGTTGTCAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56830341 269 + 57149010 AGTTTAGTTTTGCAAATCTCCCTTTTTCCT-CCCGTGAGGAT-TCTGAGAACCCACCAGTCAGAC------AGTTGTTTCCCTGTAGATCTCCCCAAACTTGATATTAAAAGTTGGCATGCGACTTCCCCACCGATTTTTATGAAATAAAACCTAAAGGAATAGCATGCACCAGGCTCAGTTATGGGAAAGAAAATATTTTATGATTTTTAAAAACCCTGATAAATGTTCACCCCATGTAA-GAAAAAGAGTTTTAGAAT----ATACCTTTCTGTTGTCAC i micMur3.chr18 I 26 C 0 s proCoq1.NW_012150197v1 1824476 264 - 2029793 AGTTTAGTTTTGCAAATCTCCCTTTTTCCT-CCCGTGAGGAT-TCTGAGAACCCACCAGACAGG-------AGTTGTTTCACTGTAGCTCTTCCCAAACTTGGTATTAAAGGTTGGCACGCGACTTCC---CCGATTTTTATGAAATAGAACCTACAGGAATAGCGTGCTCCATGCTCAG-TGTGGAAAAGAAAATATTTTATGATTTTTAAAAATCCTGATAAATGTTCACCCCATGTAA-GAAAAAAAGTTTTAGATT----ATACCTTTCTGTTGTCAC i proCoq1.NW_012150197v1 I 12 C 0 s otoGar3.GL873542 22807245 226 + 22939663 AGTTTAGTTTTGCAAATCTCCCCTT------------------------------------------------TTGTTTCCCTGGAGATCTTCCCAAACTTGATATTAAAACTTGATGTGTCACTTCCCCACAGATTTTTATAAAA-AAAACCTAAAGGAATTATGTGGGTCATGCTCAGTTATGAGAAAGAAAATATTTTATGATTTTTAAAAATCCTAACAAATGTTCACTGTATGTAA-GAAAA--AGTTTTAGATT----ATTCCTTTCTGTTGTCAC i otoGar3.GL873542 I 7 C 0 s mm10.chr2 181764388 253 + 182113224 AGTTTAGCTTTTCAAATCTCTCCATTTCCT-CCTCTGAAAAG-TCTGTGGACCCACCAACCCAACAG---AAATTGTTTACCTGTAGATCTTCCCAAAC------TTAAAAAGGCACGTGCAACCTGCCTTCATATTTTTATGAAATAAAGCTTAAAGGAACAGTGTAC------------TATTGAAA--AAAATGTTTTATGAGTCTTAAAAATTCTGACAAAATTTTATCTTATATAAGGAAAAAAAGTTTTAGATT----ATACCTTGCTGTTGTCAC i mm10.chr2 I 1 C 0 s canFam3.chr24 47575477 264 + 47698779 AGTTTGGTTTTGCAAATCCGCCTCTCACCTCCCCGTGTGGGGTTCGGGGGACCCTCGCGTCCGCTCGGCCGAGGGGTTCCGCTGTGCGTCT-CCCACACGT-------AAAAGCCACGGGCAACTTGCCTACCGATTTTTGTGAAATAAAGCGTAAAGGAACAACGTACCGCATTCTTAGTTACGGAAAAGGAAATATTTTAGGACGAC-AAAGATCCTGACGGCTTTCCACGCTGCCCGA-GG----AAGTTTCGGGGG----ACACCTCGCCGCCGTCAG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 212882 250 - 397369 GGGTTGGTCCTTTGCATCCCTCCACCCGCTGCCCGC----AA-CACAAGCACCCACCAATCGGGCAA---AAGCTGCTTCCCTGTGGATCTTCCCGAGC------TTAAAAAGTCACATGCAACTTCCCTGCAGATTTTTATGAAGTGAAAATTAAAGGAACAAAGTATTCTGTGCTTCGTTATGGAAAACAA-----TTTATGATTGA-AAAAATCGTGACTCTGTTTTTACCCATGTAA-GAA------TTTTGGAGC----ACAGTTTGCTGTTGCCC- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=10920.000000 s hg38.chr20_KI270870v1_alt 70512 1 + 183433 T s panTro5.chr20 66395329 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075653 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460892 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989667 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716158 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384146 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854369 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656651 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41763 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527683 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s aotNan1.NW_018500483v1 2645833 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 I 145 s micMur3.chr18 56830610 1 + 57149010 T i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1824740 1 - 2029793 T i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22807471 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 213132 1 - 397369 T i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47575741 1 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181764641 0 + 182113224 C e saiBol1.JH378156 16248219 34 + 16356641 I e cebCap1.NW_016107870v1 1116527 166 + 1231380 I e calJac3.chrUn_GL286459 9807 35 + 372756 I a score=155290.000000 s hg38.chr20_KI270870v1_alt 70513 23 + 183433 TACAAGCAGGGATCTGTTG--------------GGGT s panTro5.chr20 66395330 22 + 66533130 TACAAGCAGGGATCTGTT---------------GGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075654 23 + 62195757 TACAAGCAGGGATCTGTTG--------------GGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460893 23 - 578057 TACAAGCAGGGATCTGTTG--------------GGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989668 23 - 110113093 TACAAGCAGGGATCTGCTG--------------GGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716159 23 - 92844088 CACAAGCAGGGGTCTGCTG--------------GGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384147 23 + 96509753 CACAAGCAGGGGTCTGCTG--------------GGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854370 23 - 16982598 CACAAGCAGGGGTCTGCTG--------------GGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656652 23 - 3785965 CACAAGCAGGGGTCTGCTG--------------GGGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41764 23 - 179258 CACAAGCAGGGGTCTGCTG--------------GGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527684 23 - 5823884 TACAAGCAGAGGTCTGCTG--------------GGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 9842 37 + 372756 TCCTAGCAGGGGTCTGCTGGGGTTGGGAGCCTTGGGT i calJac3.chrUn_GL286459 I 35 C 0 s saiBol1.JH378156 16248253 26 + 16356641 CCCTAGCA-----------GGCTCGGGAGCCTCGGGG i saiBol1.JH378156 I 34 C 0 s micMur3.chr18 56830611 23 + 57149010 TACAAGTACGGATCCGCTG--------------GGGT i micMur3.chr18 C 0 I 14 s proCoq1.NW_012150197v1 1824741 23 - 2029793 TCCAAGTACGGATGTGTTG--------------GGGT i proCoq1.NW_012150197v1 C 0 I 110 s otoGar3.GL873542 22807472 22 + 22939663 TA-AAGTAGGGCTCTGTTG--------------GAAT i otoGar3.GL873542 C 0 I 14 s mm10.chr2 181764641 19 + 182113224 ---AAGCAGGAG-CTGTTT--------------GAGT i mm10.chr2 C 0 I 13 s canFam3.chr24 47575742 23 + 47698779 GGCCAGCGGGGCGGGAGCG--------------GGGC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 213133 37 - 397369 TACAAGCAGGGATCTGTTCAGTTCGGGAGGCTTGGGT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e cebCap1.NW_016107870v1 1116527 166 + 1231380 I e aotNan1.NW_018500483v1 2645834 145 + 11732439 I a score=176110.000000 s hg38.chr20_KI270870v1_alt 70536 23 + 183433 TTGGAATT-CTCTGTCTCAGCCC-G s panTro5.chr20 66395352 23 + 66533130 TTGGAATT-CTCTGTCTCAGCCC-G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075677 23 + 62195757 TTGGAATT-CTCTGTCTCAGCCC-G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460916 23 - 578057 TTGGAATT-CTCTGTCTCAGCCC-G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989691 23 - 110113093 CTGGAATT-CTCTGTCTCAGCCC-G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716182 23 - 92844088 TTGGAATT-CTCTGTCTCAGCCC-G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384170 23 + 96509753 TTGGAATT-CTCTGTCTCAGCCC-G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854393 23 - 16982598 TTGGAATT-CTCTGTCTCAGCCC-G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656675 23 - 3785965 TTGGAATT-CTCTGTCTCAGCCC-G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41787 23 - 179258 TTGGAATT-CTCTGTCTCAGCCC-G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527707 23 - 5823884 TTGGAATT-CTCTGTTTCAGCCC-G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 9879 23 + 372756 TTGGAATT-CTCCGTCTCAGCCT-G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248279 24 + 16356641 TTGCAGGT-CTCCGTCTCAGCCTGG i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56830648 23 + 57149010 TTGGAATT-GCCCCTCTCAGCCT-G i micMur3.chr18 I 14 I 71 s otoGar3.GL873542 22807508 16 + 22939663 TTTGAATT-GCCCCTCT-------- i otoGar3.GL873542 I 14 C 0 s mm10.chr2 181764673 19 + 182113224 TTGGAATTGCTTTGCCTTG------ i mm10.chr2 I 13 C 0 s canFam3.chr24 47575765 19 + 47698779 TGGGGATG-----GCCTCCGGCC-G i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 213170 23 - 397369 TTGGAATT-GCCTCTCCCAGCCC-G i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1824764 110 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e cebCap1.NW_016107870v1 1116527 166 + 1231380 I e aotNan1.NW_018500483v1 2645834 145 + 11732439 I a score=327189.000000 s hg38.chr20_KI270870v1_alt 70559 80 + 183433 GAGCCCAG-AGTTCAGCGATAGCTGAATA-CTGGTGCGAGCTCAGAAGCTTCCGTGTGCGGAGAACAAAGA-C---------------TGAGGCGCTC s panTro5.chr20 66395375 82 + 66533130 GAGCCCAGCAGTTTAGCGATAGCTGAATA-CTGGTGCGAACTCAGAAGCTTCGGTGTGCGGAGAACAAAGACC---------------CGAGGCGCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075700 80 + 62195757 GAGCCCAG-AGTTTAGCGATAGCTGAATA-CTGGTGCGAACTCAGAAGCTTCGGTGTGCGGAGAACAAAGA-C---------------CGAGGCGCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 460939 80 - 578057 GAGCCCAG-AGTTCAGCGATAGCTGAATA-CTGGTGCGAACTCAGAAGCTTCCGTGTGCGGAGAACAAAGA-C---------------CGAGGCGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989714 73 - 110113093 GAGCCCAG-AGTTGAGCGAGAGCTGAATA-CTGGTGCGAACTC--AAGCTTCCCTGTGCGGAGAACAAAGG-C---------------TGAGG----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716205 80 - 92844088 GAGCCCCG-AGTTTGGCGATGGCTGAAAA-CCGGCGCGAGCTCGGAAGCTTCCCTGTGCGGAGAACAAAGA-C---------------GGAGGCGCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384193 80 + 96509753 GAGCCCCG-AGTTTGGCGATGGCTGAAAA-CCGGCGCGAGCTCGGAGGCTTCCCTGTGCGGAGAACAAAGA-C---------------GGAGGCGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854416 80 - 16982598 GAGCCCCG-AGTTTGGCGATGGCTGAAAA-CCGGCGCGAGCTGGGAAGCGTCCCTGTGCGGAGAACAAAGA-C---------------GGAGGCGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656698 80 - 3785965 GAGCCCCG-ACTTTGGCGATGGCTGAAAA-CCGGCGCGAGCTCAGAAGCTTCCCTGTGCGGAGAACAAAGA-C---------------GGAGGCGCTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41810 80 - 179258 GAGCCCCG-AGTTTGGCGATGGCTGAAAA-CCGGCGCGAGCTCGGAAGCTTCCCTGTGCGGAGAACAAAGA-C---------------GGAGGCGCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527730 80 - 5823884 GAGCCCCG-AGTTTGGCAATGGCTGAAAA-CTGGTGCGAGCTCAGAAGCTTCCCTGTGCGGAGAACAAAGA-C---------------GGAGGCGCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 9902 54 + 372756 CAGCCTGG-A-----------------------GTGCCAACTCACAGACTTCCCTGCGCTGAGAACAAAGA--------------------GGCGCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248303 72 + 16356641 CAGCCCGT-AGTGGAGCGGT--CTGAAT--TCGGTGCCAGCTCGCAGGCTTCCCTGCGCCGAGAACAAAGA--------------------GGC-CTC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22807524 78 + 22939663 -AGCTTGG-AGTTTAGCCACTGCTGAATG-CTGGAGC-AGAGGGGAGATTTTGCAGTGCCTGGGACAAAGG-C---------------CTAGGAGTGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181764692 87 + 182113224 -----CTA-GACGAACTGGCAACTGAGGACCTGGTGCATAC-GACAGGCTTTGGCGAGTAGAGAACAAAGG-CCAGCTCCGTGGGGGTGGGGGTG--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47575784 36 + 47698779 --------------------------------------------GAGCAGCCGCCGCGCGGGGACAAAGGG-C---------------C--GGCGCCG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 213193 63 - 397369 -------G-AGTTCAGCCACCACCAAATG-CTGGCGCTAACTCCCCAGCGCTGCCGCG---AGAACAAAGG-G---------------CGC------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1824764 110 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56830671 71 + 57149010 I e cebCap1.NW_016107870v1 1116527 166 + 1231380 I e aotNan1.NW_018500483v1 2645834 145 + 11732439 I a score=6392.000000 s hg38.chr20_KI270870v1_alt 70639 1 + 183433 T s panTro5.chr20 66395457 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075780 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461019 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92716285 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384273 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854496 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656778 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41890 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527810 1 - 5823884 T i colAng1.NW_012114444v1 C 0 I 8 s calJac3.chrUn_GL286459 9956 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248375 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56830742 1 + 57149010 T i micMur3.chr18 I 71 C 0 s mm10.chr2 181764779 1 + 182113224 T i mm10.chr2 C 0 C 0 s dasNov3.JH569290 213256 1 - 397369 C i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1824764 110 - 2029793 I e canFam3.chr24 47575820 1 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e cebCap1.NW_016107870v1 1116527 166 + 1231380 I e aotNan1.NW_018500483v1 2645834 145 + 11732439 I e nomLeu3.chr13 109989787 0 - 110113093 C e otoGar3.GL873542 22807602 0 + 22939663 C a score=10035.000000 s hg38.chr20_KI270870v1_alt 70640 1 + 183433 G s panPan2.chr20 62075781 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461020 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92716286 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384274 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854497 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656779 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41891 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527819 1 - 5823884 G i colAng1.NW_012114444v1 I 8 C 0 s calJac3.chrUn_GL286459 9957 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248376 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1116693 1 + 1231380 G i cebCap1.NW_016107870v1 I 166 C 0 s micMur3.chr18 56830743 1 + 57149010 A i micMur3.chr18 C 0 I 1 s mm10.chr2 181764780 1 + 182113224 G i mm10.chr2 C 0 C 0 s canFam3.chr24 47575821 1 + 47698779 G i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 213257 1 - 397369 G i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1824764 110 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e aotNan1.NW_018500483v1 2645834 145 + 11732439 I e panTro5.chr20 66395458 0 + 66533130 C e nomLeu3.chr13 109989787 0 - 110113093 C e otoGar3.GL873542 22807602 0 + 22939663 C a score=10035.000000 s hg38.chr20_KI270870v1_alt 70641 1 + 183433 G s panPan2.chr20 62075782 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461021 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92716287 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384275 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854498 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656780 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41892 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527820 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 9958 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248377 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1116694 1 + 1231380 G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2645979 1 + 11732439 G i aotNan1.NW_018500483v1 I 145 C 0 s mm10.chr2 181764781 1 + 182113224 G i mm10.chr2 C 0 I 11 s canFam3.chr24 47575822 1 + 47698779 A i canFam3.chr24 C 0 I 5 s dasNov3.JH569290 213258 1 - 397369 G i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1824764 110 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56830744 1 + 57149010 I e panTro5.chr20 66395458 0 + 66533130 C e nomLeu3.chr13 109989787 0 - 110113093 C e otoGar3.GL873542 22807602 0 + 22939663 C a score=782796.000000 s hg38.chr20_KI270870v1_alt 70642 56 + 183433 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACTT--------CGGATCCAC-CCACCGCTCAGGC s panTro5.chr20 66395458 55 + 66533130 GGGGAGAGCGCTGTCCGAAGTGC-GATC----GACTT--------CGGATCCACGCCACCGCTCAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075783 56 + 62195757 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACTT--------CGGATCCAC-CCACCGCTCAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461022 56 - 578057 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACTT--------CGGATCCAC-CCACCGCTCAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989787 56 - 110113093 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACTT--------CGGATCCAC-CCACCGCTCAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716288 56 - 92844088 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACTT--------CGGATCCAC-CCACCGCTCAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384276 56 + 96509753 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACTT--------CGGATCCAC-CCACCGCTCAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854499 55 - 16982598 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACTT--------C-GATCCAC-CCGCCGCTCAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656781 56 - 3785965 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACTT--------CGGATCCAC-CCACCGCTCAGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41893 56 - 179258 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACCT--------CGGATCCAC-CCACCGCTCAGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527821 56 - 5823884 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACTT--------CGGATCCAC-CCACCGCTCAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 9959 56 + 372756 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACCT--------CGGATCCAC-CCACCGCTCAGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248378 56 + 16356641 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGACCG--------CGGGTCCAC-CCACCGCTCGGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1116695 54 + 1231380 GGGGAGAGCGCTGTCCGAAGTGCTGATC---AGGCCT--------CGGATCCAC-CCAGCGCT--GGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2645980 56 + 11732439 GGGGAGAGCGCTGTCCGAAGTGCTGATC---GGGTCT--------CGGACCCGC-CCGCCGCTCGGGC i aotNan1.NW_018500483v1 C 0 I 198 s micMur3.chr18 56830745 55 + 57149010 GGAGAGAGCGCTGTCCAAAGTGCTGATC---AGACCT--------C-GGTCCAC-CCACCGCTCAGGC i micMur3.chr18 I 1 C 0 s proCoq1.NW_012150197v1 1824874 56 - 2029793 GGGGAGAGCGCTGTCCAAAGTGCTGATC---AGACCT--------CGGGTCCTC-CCGCCGCTCAGGC i proCoq1.NW_012150197v1 I 110 I 94 s otoGar3.GL873542 22807602 52 + 22939663 ----AGAGCGCTGTCCAAAGTGCTGATC---AGCCTT--------TGGGTCCAC-CCACAGTTCAGGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181764793 54 + 182113224 GAAGGGAGCGCTGTCCAGAGTGCTGATC---AGTCTG--------CGGCACGCC-TCCGCTCTCAG-- i mm10.chr2 I 11 C 0 s canFam3.chr24 47575828 54 + 47698779 GGAGGGAGCGCTGTCCGAAGTGCTGATC---AGGCCCGGCAGGCGCGGCCGCAC-CCT---------- i canFam3.chr24 I 5 C 0 s dasNov3.JH569290 213259 57 - 397369 GCGGAGGGCGCTGTCCAGCGTGCTGGCCGCTGCGCCG--------CGGGCCT---CGGCCGCCCCAGC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=170802.000000 s hg38.chr20_KI270870v1_alt 70698 23 + 183433 CGCCTCCCAGGGGCTGAAGGGCG s panTro5.chr20 66395513 23 + 66533130 TGCCTCCCAGGGGCTGACGGGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075839 23 + 62195757 TGCCTCCCAGGGGCTGACGGGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461078 23 - 578057 TGCCTCCCAGGGGCTGAAGGGCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989843 23 - 110113093 TCCCTCCCAGGGGCTGAAGGGCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716344 23 - 92844088 TCCCTCCCAGGGGCTGGAGGGCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384332 23 + 96509753 TCCCTCCCAGGGGCTGGAGGGCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854554 23 - 16982598 TCCCTCCCGGGGGCTGGAGGGCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656837 23 - 3785965 TCCCTCCCAGGGGCTGGAGGGCG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41949 23 - 179258 TCCCTCCCAGGGGCTGGAGGGCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527877 23 - 5823884 TCCCTCCCAGGCGCTGAAGGGCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10015 22 + 372756 TCCTTCAC-AGGGCTGAAGGGCG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248434 22 + 16356641 GCCTTCCC-GGGGCTGCCGGGCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1116749 23 + 1231380 TCCTTCCCGGGGGCTGAAGGGCG i cebCap1.NW_016107870v1 C 0 I 76 s micMur3.chr18 56830800 22 + 57149010 TCCTTCCT-GGGGCTGGAGGGAA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22807654 20 + 22939663 -TCCTCCT--GAGCTGAAGGGAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181764847 22 + 182113224 CTCCTTTC-AGGGTCGAAGGGAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47575882 18 + 47698779 CGCCCCGCTGGAGCGGGA----- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 213316 15 - 397369 -CTTCTGCAGGGACTG------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1824930 94 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e aotNan1.NW_018500483v1 2646036 198 + 11732439 I a score=5288.000000 s hg38.chr20_KI270870v1_alt 70721 4 + 183433 GCAG s panTro5.chr20 66395536 4 + 66533130 GCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075862 4 + 62195757 GCAG i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 109989866 4 - 110113093 GCAG i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 10037 4 + 372756 GCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248456 4 + 16356641 GCGG i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56830822 1 + 57149010 ---G i micMur3.chr18 C 0 I 27 s otoGar3.GL873542 22807674 1 + 22939663 ---G i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181764869 4 + 182113224 GTGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47575900 2 + 47698779 --AG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1824930 94 - 2029793 I e cerAty1.NW_012001373v1 3656860 0 - 3785965 C e colAng1.NW_012114444v1 5527900 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 213331 0 - 397369 C e gorGor5.CYUI01015848v1 461101 0 - 578057 C e manLeu1.NW_012101652v1 41972 0 - 179258 C e macNem1.NW_012014244v1 16854577 0 - 16982598 C e cebCap1.NW_016107870v1 1116772 76 + 1231380 I e aotNan1.NW_018500483v1 2646036 198 + 11732439 I e rheMac8.chr10 92716367 0 - 92844088 C e macFas5.chr10 96384355 0 + 96509753 C a score=-637.000000 s hg38.chr20_KI270870v1_alt 70725 27 + 183433 CCGAACCGGAGAGACGTGCCGGCGGCC s panTro5.chr20 66395540 27 + 66533130 CCGAACCGGAGAAACGTGCGCGCGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075866 27 + 62195757 CCGAACCGGAGAAACGTGCCGGCGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461101 6 - 578057 ---------------------GCGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989870 26 - 110113093 CCGAACCTGCGAAACGTGCC-GCGGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716367 6 - 92844088 ---------------------GCGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384355 6 + 96509753 ---------------------GCGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854577 6 - 16982598 ---------------------GCGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656860 6 - 3785965 ---------------------GCGGCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41972 6 - 179258 ---------------------GCGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527900 6 - 5823884 ---------------------GCGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10041 27 + 372756 CCCAACCTGAAAAACGTGTTGGCAGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248460 22 + 16356641 CCGGACC-GGGAAACGC----GCAGGC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22807676 6 + 22939663 ---------------------GCAAAC i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181764873 19 + 182113224 TCAAACCCCAGAG--------TTGGCT i mm10.chr2 C 0 I 3 s canFam3.chr24 47575902 15 + 47698779 CCGAGCCCC------------GCAAGC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 213331 10 - 397369 ----GCTGGAAAAA------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1824930 94 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56830823 27 + 57149010 I e cebCap1.NW_016107870v1 1116772 76 + 1231380 I e aotNan1.NW_018500483v1 2646036 198 + 11732439 I a score=11209.000000 s hg38.chr20_KI270870v1_alt 70752 3 + 183433 GCT s panTro5.chr20 66395567 3 + 66533130 GTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075893 3 + 62195757 GCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461107 3 - 578057 GCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989896 3 - 110113093 GCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716373 3 - 92844088 CCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384361 3 + 96509753 CCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854583 3 - 16982598 CCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656866 3 - 3785965 CCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 41978 3 - 179258 CCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5527906 3 - 5823884 CCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10068 3 + 372756 CCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248482 3 + 16356641 CCC i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56830850 3 + 57149010 ACT i micMur3.chr18 I 27 C 0 s otoGar3.GL873542 22807682 3 + 22939663 TCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181764895 3 + 182113224 AAT i mm10.chr2 I 3 C 0 s canFam3.chr24 47575918 3 + 47698779 GCC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 213341 2 - 397369 -CC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1824930 94 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e cebCap1.NW_016107870v1 1116772 76 + 1231380 I e aotNan1.NW_018500483v1 2646036 198 + 11732439 I a score=245362.000000 s hg38.chr20_KI270870v1_alt 70755 33 + 183433 CT-------TCTGTCCTGCTCT-TTTCCCTGGAC-TC----CTTTG s panTro5.chr20 66395570 35 + 66533130 TTC------TCTGT-CTGCTCTCTTTGCCTGGACTTC----CTTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075896 33 + 62195757 TT-------TCTGTCCTGCTCT-TTTCCCTGGAC-TC----CTTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461110 33 - 578057 TT-------TCTGTCCTGCTCT-TTTCCCTGGAC-TC----CTTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989899 32 - 110113093 TT-------TCTGCCCTGCTC--TTTCCCTGGAC-TC----CTTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716376 33 - 92844088 TT-------GCGGCCCTGCTCT-TTCCCCTGGAC-TC----CTTTG i rheMac8.chr10 C 0 I 3 s macFas5.chr10 96384364 33 + 96509753 TT-------GCGGCCCTGCTCT-TTCCCCTGGAC-TC----CTTTG i macFas5.chr10 C 0 I 3 s macNem1.NW_012014244v1 16854586 33 - 16982598 TT-------GCGGCCCTGCTCT-TTCCCCTGGAC-TC----CTTTG i macNem1.NW_012014244v1 C 0 I 3 s cerAty1.NW_012001373v1 3656869 33 - 3785965 TT-------TCGGCCCCGCTCT-TTCCCCGGGAC-TC----CTTTG i cerAty1.NW_012001373v1 C 0 I 3 s manLeu1.NW_012101652v1 41981 33 - 179258 TT-------TGGGCCCTGCGCT-TTCCCCTGGAC-TC----CTTTG i manLeu1.NW_012101652v1 C 0 I 3 s colAng1.NW_012114444v1 5527909 33 - 5823884 TT-------TCGGCCCTGCTCT-TTCCCCTGGAC-TC----CTTTG i colAng1.NW_012114444v1 C 0 I 3 s calJac3.chrUn_GL286459 10071 33 + 372756 TC-------TCTGCCCTGCTCT-TTCCCCTGGAC-TC----CTTTG i calJac3.chrUn_GL286459 C 0 I 3 s saiBol1.JH378156 16248485 33 + 16356641 TC-------TCCGCCCTGCGCC-TTCCCCTGGAC-TC----CTTTG i saiBol1.JH378156 C 0 I 3 s cebCap1.NW_016107870v1 1116848 33 + 1231380 CT-------TCCGCCCTGCCCT-TTCCTCTGGAC-TC----CTTTG i cebCap1.NW_016107870v1 I 76 I 3 s micMur3.chr18 56830853 36 + 57149010 CC-------TCTGCCCTGCTCT-TTTCCCGTGAC-TCCCT-CTTTG i micMur3.chr18 C 0 I 3 s otoGar3.GL873542 22807685 35 + 22939663 CC-------TCTGCCCTGCT-T-TTTCCTGTGTC-TCCTC-CTTTG i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181764898 37 + 182113224 TC-------TCCACTCTGCTTC-TTTTCTGGCAC-CCCCCGCTTTG i mm10.chr2 C 0 I 3 s canFam3.chr24 47575921 40 + 47698779 --CATGGAGCTGCCCCTGCTCC-TGGCCTGCAAC-CCCT--CTTTG i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 213343 27 - 397369 ----------CTTCTCTGCCCT-ATACCC---AC-CC----CTTTG i dasNov3.JH569290 C 0 I 3 e proCoq1.NW_012150197v1 1824930 94 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e aotNan1.NW_018500483v1 2646036 198 + 11732439 I a score=559446.000000 s hg38.chr20_KI270870v1_alt 70788 65 + 183433 TCTTGA-CGGGG-TCAG--------------------------------------------------CTAAAGA--CTTCGAACCTTTACTCATCAAAGCTCATCTTCGGAAACTGCTC s panTro5.chr20 66395605 67 + 66533130 TCTTGA-CGGGGTTCAG--------------------------------------------------CTAAAGAAGTTTCGAACTATTGCTCATC-AAGCTCATCTTCGGAAACTGCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075929 65 + 62195757 TCTTGA-CGGGG-TCAG--------------------------------------------------CTAAAGA--GTTCGAACCTTTGCTCATCAAAGCTCATCTTCGGAAACTGCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461143 65 - 578057 TCTTGA-CGGGG-TCAG--------------------------------------------------CTAAAGA--GTTCGAACCTTTGCTCATCAAAGCTCATCTTCGGAAACTGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989931 65 - 110113093 TCTTGA-CGGGG-TCAG--------------------------------------------------CTGAAGA--GTTCGAACCTTTACTCATCCAAACTCATCTTCGGAAGCTGCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716412 63 - 92844088 TCTTGC-CGTG--TCAG--------------------------------------------------GTAAAGA--GTGCGAACCTTTACTCATCACAGCTCCTCTTCTGAA-CTGCTC i rheMac8.chr10 I 3 C 0 s macFas5.chr10 96384400 63 + 96509753 TCTTGC-CGTG--TCAG--------------------------------------------------GTAAAGA--GTGCGAACCTTTACTCATCACAGCTCCTCTTCTGAA-CTGCTC i macFas5.chr10 I 3 C 0 s macNem1.NW_012014244v1 16854622 63 - 16982598 TCTTGC-CGTG--TCAG--------------------------------------------------GTAAAGA--GTGCGAACCTTCACTCATCACAGCTCCTCTTCTGAA-CTGCTC i macNem1.NW_012014244v1 I 3 C 0 s cerAty1.NW_012001373v1 3656905 63 - 3785965 TCTTGA-CGTG--TCAG--------------------------------------------------GTAACGA--GTGCGAACCTTTCCTCATCACAGCGCCTCTTCTGAA-CTGCTC i cerAty1.NW_012001373v1 I 3 C 0 s manLeu1.NW_012101652v1 42017 63 - 179258 TCTTGA-CGTG--TCAG--------------------------------------------------GTAACGA--GTGCGAACCTTTACTCATCACAGCTCCTCTTCTGAA-CTGCTC i manLeu1.NW_012101652v1 I 3 C 0 s colAng1.NW_012114444v1 5527945 63 - 5823884 TCCTGA-CGTG--TCAG--------------------------------------------------GTAAAGA--GCGCGAACCTTCACTCACCACAACTCCTCTTCTGAA-CTGCTC i colAng1.NW_012114444v1 I 3 C 0 s calJac3.chrUn_GL286459 10107 65 + 372756 TCTTGGCCGTG--TCAG--------------------------------------------------CTAAAGA--GTTCGAACCTTTACTCCTCACAACTCATCTTCTGAAACTGCTC i calJac3.chrUn_GL286459 I 3 C 0 s saiBol1.JH378156 16248521 65 + 16356641 TCTTGGCCGTG--CCGG--------------------------------------------------CGAACGA--GTTCGAACCTTTGCTCCTCGAAACTCATCTTCGGAAACTGCTC i saiBol1.JH378156 I 3 C 0 s cebCap1.NW_016107870v1 1116884 65 + 1231380 TCTTGACCGCG--TCAG--------------------------------------------------CTAACGG--GTTTGAACCTTTGCTCCTCAAAACTCATCTTCTGAAACTGCTC i cebCap1.NW_016107870v1 I 3 C 0 s micMur3.chr18 56830892 65 + 57149010 TCTTGATGGTG--TCAG--------------------------------------------------CTAAAGA--TTTGGAACCTTTACTCACCCAAACCCGTCTTCTGAAACTGCTC i micMur3.chr18 I 3 I 2 s proCoq1.NW_012150197v1 1825024 65 - 2029793 TCTTGATGGTG--TCAG--------------------------------------------------CTAAAGA--TTTTGAACCTTCACTCACCAAAACCCATCGTCCGAAACTGCTC i proCoq1.NW_012150197v1 I 94 I 327 s otoGar3.GL873542 22807723 115 + 22939663 TCTTGATGGTA--ACAAGAAAGAGTTTTGTTGAAAACTCTTTCAAGTCATTTTGGTCTAATGAAAATTTAAGGA--TTTTCATCCTTTACTCATCAAAACTCGTCTTCTGAAACTGCTC i otoGar3.GL873542 I 3 I 2 s mm10.chr2 181764938 60 + 182113224 TCCAAC-ACTG--TCAG--------------------------------------------------ACAAAGA--TCTTGAATCTTTACTCCTCAAA--CCAGCTT--GAAAACTCTC i mm10.chr2 I 3 I 1 s canFam3.chr24 47575964 65 + 47698779 TCTAGATGGAG--TCGG--------------------------------------------------CTAAAGA--TTGTGAACCTTTACTCATCAAAACCCATCTTCTGAAACGGCTC i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 213373 64 - 397369 TCTTGA-TGGT--TCAG--------------------------------------------------CTGAAGA--CTTAGACCCTGTGCTCGTCAAAACCCACCTTCTGAACTGGCTC i dasNov3.JH569290 I 3 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e aotNan1.NW_018500483v1 2646036 198 + 11732439 I a score=118240.000000 s hg38.chr20_KI270870v1_alt 70853 18 + 183433 ATAGCACTTTAACCTCCC s panTro5.chr20 66395672 17 + 66533130 ATAGCACTTTAACCT-CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62075994 18 + 62195757 GTAGCACTTTAACCTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461208 18 - 578057 GTAGCACTTTAACCTCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109989996 18 - 110113093 ACAGCACTGGAACCTCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716475 18 - 92844088 ATGCCACTTTGACCTCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384463 18 + 96509753 ATGCCACTTTGACCTCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854685 18 - 16982598 ATGCCACTTTGACCTCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656968 18 - 3785965 ATGCCACTTTGACCTCCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 42080 18 - 179258 ATGCCACTCTGACCTCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5528008 18 - 5823884 ATGCCACTTTAACCTCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10172 18 + 372756 ATACCACTTTAACCTCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248586 18 + 16356641 ATCCCACTCGAACCTCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1116949 18 + 1231380 ATCCCACTTTAGCCTCCC i cebCap1.NW_016107870v1 C 0 I 10 s micMur3.chr18 56830959 18 + 57149010 GCGGCTTTACAATCTCCC i micMur3.chr18 I 2 C 0 s otoGar3.GL873542 22807840 18 + 22939663 ACAACTTAAAAATCTTCA i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181764999 16 + 182113224 --ACATCTCTAACTTACC i mm10.chr2 I 1 I 1 s canFam3.chr24 47576029 18 + 47698779 ATTCAACTGTAACCTCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 213437 6 - 397369 ------CTCTAA------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e aotNan1.NW_018500483v1 2646036 198 + 11732439 I a score=134018.000000 s hg38.chr20_KI270870v1_alt 70871 24 + 183433 GGTGGGAGCTCCCAGGG---CGCCCTA s panTro5.chr20 66395689 23 + 66533130 GGTGGGA-CTCCCAGGG---CGCCCTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62076012 24 + 62195757 GGTGGGAGCTCCCAGGG---CGCCCTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461226 24 - 578057 GGTGGGAGCTCCCAGGG---CGCCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990014 24 - 110113093 GGTGGGAGCTCCCGGGG---CGCTCTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716493 24 - 92844088 GGCGGGAGCTCCCAGGG---CCCTcca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384481 24 + 96509753 GGCGGGAGCTCCCAGGG---CCCTCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854703 24 - 16982598 GGCGGGAGCTCCCAGGG---CCCTcca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3656986 24 - 3785965 GGCGGGAGCTCCCAGGG---CCCTcca i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 42098 24 - 179258 GGCGGGAGCTCCCAGGG---CCCTcca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5528026 24 - 5823884 GGCGGGAGCTCCCAGGG---CCCTCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10190 23 + 372756 AGTGAGAGCACCC-GGG---CTCTCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248604 10 + 16356641 A--------------GG---CTCTCTG i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56830977 22 + 57149010 AGTGGGAGCCCCCAGGG-----CTCTG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22807858 24 + 22939663 AGTGGGAGCTTCCAAGG---CTCTCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181765016 18 + 182113224 GATAGG--TTGCCAG-------TCCTG i mm10.chr2 I 1 C 0 s canFam3.chr24 47576047 27 + 47698779 CGTGGGGGCTCCCGGGGCTTCTCCCCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 213443 19 - 397369 --TGGGAG-GCCCAGGG---CACTG-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e cebCap1.NW_016107870v1 1116967 10 + 1231380 I e aotNan1.NW_018500483v1 2646036 198 + 11732439 I a score=181844.000000 s hg38.chr20_KI270870v1_alt 70895 21 + 183433 GGTCCTGCCAGCAGGCACCGA s panTro5.chr20 66395712 21 + 66533130 GGTCCTGGCAGCAGGCACCGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62076036 21 + 62195757 GGTCCTGCCAGCAGGCACCGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461250 21 - 578057 GGTCCTGCCAGCGGGCACCGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990038 21 - 110113093 GGTCCTGCCGGCAGGCACCGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716517 21 - 92844088 ggtcctgccagcaggcaccag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384505 21 + 96509753 GGTCCTGCCAGCAGGCACCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854727 21 - 16982598 ggtcctgccagcaggcaccag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3657010 21 - 3785965 ggtcctgccagcaggcaccag i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 42122 21 - 179258 ggtcctgccagcaggcaccag i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5528050 21 - 5823884 GGTCCTGCCAGCAGGCACCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10213 21 + 372756 GGTCCTGCCCGCCGGCACCAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248614 8 + 16356641 GGTCCT-------------AA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1116977 21 + 1231380 GGTCGTGCCCGCCGGCACCAA i cebCap1.NW_016107870v1 I 10 C 0 s micMur3.chr18 56830999 21 + 57149010 GGCTCTGCCAGCCAGAGCTGA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22807882 21 + 22939663 GGTTCTGCCAGCAGGCACTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181765034 19 + 182113224 GGCTCTCCCTG--GCTACTGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47576074 21 + 47698779 GGTTCTCAGAATGGGCACCGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 213462 21 - 397369 AGTGCTGTGAACAGACACTGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e aotNan1.NW_018500483v1 2646036 198 + 11732439 I a score=134508.000000 s hg38.chr20_KI270870v1_alt 70916 15 + 183433 TTTC--AAGTTTC-CAGG s panTro5.chr20 66395733 16 + 66533130 TTCA--AAGTTTCGCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62076057 15 + 62195757 TTTC--AAGTTTC-CAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461271 15 - 578057 TTTC--AAGTTTC-CAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990059 15 - 110113093 TGTT--AAGTTTC-CAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716538 15 - 92844088 tcgt--cagtttc-cagg i rheMac8.chr10 C 0 I 44 s macFas5.chr10 96384526 15 + 96509753 TCGT--CAGTTTC-CAGG i macFas5.chr10 C 0 I 34 s macNem1.NW_012014244v1 16854748 15 - 16982598 tcgt--cagtttc-cagg i macNem1.NW_012014244v1 C 0 I 44 s cerAty1.NW_012001373v1 3657031 15 - 3785965 tcgt--cagtttc-cagg i cerAty1.NW_012001373v1 C 0 I 44 s manLeu1.NW_012101652v1 42143 15 - 179258 tcgt--cagtttc-cagg i manLeu1.NW_012101652v1 C 0 I 44 s colAng1.NW_012114444v1 5528071 17 - 5823884 TCGTAAAAGTTTC-CAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10234 15 + 372756 TTTT--AAGTTTC-CAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248622 15 + 16356641 TTTT--AAGTTTC-CAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1116998 15 + 1231380 TTTT--AAGTTTC-CAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2646234 15 + 11732439 TTTT--AAGTTTC-CGGG i aotNan1.NW_018500483v1 I 198 C 0 s micMur3.chr18 56831020 14 + 57149010 TTCC--AAGTTT--CAAG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22807903 15 + 22939663 TTTT--GAGTTTC-CAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181765053 15 + 182113224 TTTG--AGATTTC-CTTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47576095 15 + 47698779 TTTG--ACATTTC-TGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 213483 15 - 397369 GTGG--AAGTTTC-CGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=69154.000000 s hg38.chr20_KI270870v1_alt 70931 20 + 183433 CACATTCTGA-ATGC-TCCTCC s panTro5.chr20 66395749 20 + 66533130 CACATTCTGA-ATGC-TCTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62076072 20 + 62195757 CACATTCTGA-ACGC-TCTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461286 20 - 578057 CACATTCTGA-ATGC-TCTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990074 19 - 110113093 CACAGTCTGA-ATAC-TCTTA- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96384575 10 + 96509753 CACATTCTGA------------ i macFas5.chr10 I 34 C 0 s colAng1.NW_012114444v1 5528088 10 - 5823884 CACACTCTGA------------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10249 20 + 372756 CACATTCTGC-AGGC-TCTTCC i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16248637 20 + 16356641 CACATTCTGA-AGGC-TCTTCC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1117013 20 + 1231380 CACATTCTGA-AGGC-TCTTCC i cebCap1.NW_016107870v1 C 0 I 140 s aotNan1.NW_018500483v1 2646249 20 + 11732439 CACATTCTGA-AGGC-TCTTCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56831034 20 + 57149010 CACTTTCTGG-ATGC-CCCTCC i micMur3.chr18 C 0 I 4 s otoGar3.GL873542 22807918 21 + 22939663 CACATTCTGG-AGGCTCCCTCC i otoGar3.GL873542 C 0 I 4 s mm10.chr2 181765068 20 + 182113224 CATATTCAAA-GTAC-AGCCCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47576110 21 + 47698779 CACATTCAGAAATGC-TTGCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 213498 19 - 397369 -TCTATCTGG-GCGG-TCAGCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e cerAty1.NW_012001373v1 3657046 44 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e manLeu1.NW_012101652v1 42158 44 - 179258 I e macNem1.NW_012014244v1 16854763 44 - 16982598 I e rheMac8.chr10 92716553 44 - 92844088 I a score=-12775.000000 s hg38.chr20_KI270870v1_alt 70951 2 + 183433 -TG s panTro5.chr20 66395769 1 + 66533130 -T- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62076092 2 + 62195757 -TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461306 2 - 578057 -TG i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chrUn_GL286459 10270 1 + 372756 --G i calJac3.chrUn_GL286459 I 1 I 1 s saiBol1.JH378156 16248658 1 + 16356641 --G i saiBol1.JH378156 I 1 I 1 s aotNan1.NW_018500483v1 2646269 1 + 11732439 --G i aotNan1.NW_018500483v1 C 0 I 1 s mm10.chr2 181765088 2 + 182113224 -AG i mm10.chr2 C 0 C 0 s canFam3.chr24 47576131 1 + 47698779 --G i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 213517 2 - 397369 CT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e cerAty1.NW_012001373v1 3657046 44 - 3785965 I e colAng1.NW_012114444v1 5528098 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56831054 4 + 57149010 I e manLeu1.NW_012101652v1 42158 44 - 179258 I e macNem1.NW_012014244v1 16854763 44 - 16982598 I e cebCap1.NW_016107870v1 1117033 140 + 1231380 I e nomLeu3.chr13 109990093 0 - 110113093 C e rheMac8.chr10 92716553 44 - 92844088 I e otoGar3.GL873542 22807939 4 + 22939663 I e macFas5.chr10 96384585 0 + 96509753 C a score=165913.000000 s hg38.chr20_KI270870v1_alt 70953 23 + 183433 --GCAGCGCCACAGAGGGTCTGGGG s panTro5.chr20 66395770 23 + 66533130 --GCAGCGCCACAGAGGGTCTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62076094 23 + 62195757 --GCAGCGCCACAGAGGGTCTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461308 23 - 578057 --GCAGCGCCACAGAGGGTCTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990093 23 - 110113093 --GCAGCGCCGCAGAGGGTCTGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716597 22 - 92844088 --GCAGC-CCACAGAGGGTCTGGGG i rheMac8.chr10 I 44 C 0 s macFas5.chr10 96384585 22 + 96509753 --GCAGC-CCACAGAGGGTCTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854807 22 - 16982598 --GCAGC-CCACAGAGGGTCTGGGG i macNem1.NW_012014244v1 I 44 C 0 s cerAty1.NW_012001373v1 3657090 22 - 3785965 --GCAGC-CCACAGAGGGTCTGGGG i cerAty1.NW_012001373v1 I 44 C 0 s manLeu1.NW_012101652v1 42202 22 - 179258 --GCAGC-CCACAGAGGGTCTGGGG i manLeu1.NW_012101652v1 I 44 C 0 s colAng1.NW_012114444v1 5528098 22 - 5823884 --GCAGC-GCACAGAGGGTCTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10272 23 + 372756 --GCAGCCCCACAGAAGGTCTGGGG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16248660 4 + 16356641 --GCAG------------------- i saiBol1.JH378156 I 1 C 0 s aotNan1.NW_018500483v1 2646271 23 + 11732439 --GCAGCCCCACGGAGGGTCTGGGG i aotNan1.NW_018500483v1 I 1 I 145 s micMur3.chr18 56831058 23 + 57149010 --GCAGCCCCAGGTAGGGTCTGGGG i micMur3.chr18 I 4 I 155 s otoGar3.GL873542 22807943 23 + 22939663 --GCAGCCTCGGATTGGGTCTGGGG i otoGar3.GL873542 I 4 C 0 s mm10.chr2 181765090 12 + 182113224 ------------GCAGAATTTGGA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47576133 23 + 47698779 --GCAGCCTCGGGTGGAGCCCGAAG i canFam3.chr24 I 1 I 1 s dasNov3.JH569290 213519 25 - 397369 GCGCAGCCTCAGGTGGGGTCTAGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e cebCap1.NW_016107870v1 1117033 140 + 1231380 I a score=1015433.000000 s hg38.chr20_KI270870v1_alt 70976 161 + 183433 -GCCCATTCCCGACCCCCGGAGCGCCACACCTCAGGAGGC-CTG----TGATTGTTCAAAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTACGTTTTCAC-AAATACAATTTCTATTACCTG-AAAAAACT-G-TTGTGC-CCCACGAAGC----CCGTGTTG--CGCAGGTTCA--TCTCT s panTro5.chr20 66395793 169 + 66533130 -CGCCAGT-CCGACCTCCGGAGCGCCACACCTCAGGAGGCGCTG----TGATTGTTCAAAAGGGGAAAGTGAGAAATGCCGAAAAGACCTTAGTTTTCCACAAAATACAATTTCTATTACCTGAAAAAAACT-C-TTGTGCGCCCACGAAGC----CCGTGTTG--CGCAGCGTCATCTCTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62076117 162 + 62195757 -GCCCATTCCCGACCCCCGGAGCGCCACACCTCAGGAGGC-CTG----TGATTGTTCAAAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTACGTTTTCAC-AAATACAATTTCTATTACCTG-AAAAAACT-C-TTGTGC-CCCACGAAGC----CCGTGTTG--CGCAGGTTCATCTCTC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461331 162 - 578057 -GCCCATTCCCGACCCCCGGAGCGCCACACCTCAGGAGGC-CTG----TGATTGTTCAAAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTACGTTTTCAC-AAATACAATTTCTATTACCTG-AAAAAACT-C-TTGTGC-CCCACGAAGC----CCGTGTTG--CGCAGGTTCATCTCTC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990116 162 - 110113093 -GCCCATTCCCGACCCCCGGAGCGCCACACCTCAGGAGGC-CTG----TGATTGTTCAGAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTACGTTTTCAC-AAATTTGATTTCTGTTACCTG-AAAAAACT-C-CCGTGC-CCCACGAAGC----GCGTGTTG--CGCAGGTTCGTTTCTC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716619 162 - 92844088 -GCCCATTCGCGACCACCAGAGCGCCGCACCTCAGGAGGC-CTG----TGATTGTGCAAAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTAGGTTTTCAC-AAATATAATTTCTATTACCTG-AAAAAACT-C-TTGGGC-CTCACGAAGC----CCGTGGTG--TACGGGTTGATTTCTC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384607 162 + 96509753 -GCCCATTCGCGACCACCAGAGCGCCGCACCTCAGGAGGC-CTG----TGATTGTGCAAAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTAGGTTTTCAC-AAATATAATTTCTATTACCTG-AAAAAACT-C-TTGGGC-CTCACGAAGC----CCGTGGTG--TACGGGTTGATTTCTC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854829 162 - 16982598 -GCCCATTCGCGACCACCAGAGCGCCGCACCTCAGGAGGC-CTG----TGATTGTGCAAAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTAGGTTTTCAC-AAATATAATTTCTATTACCTG-AAAAAACT-C-TTGGGC-CTCACGAAGC----CCGTGGTG--TACGGGTTGATTTCTC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3657112 162 - 3785965 -GCCCATTCGCGAGCACCAGAGCGCCGCAGCTCAGGAGGC-CTG----TGATTGTGCAAAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTAGGTTTTCAC-AAACATAATTTCTATTACCTG-AAAAAACT-C-TTGGGC-CTCACGAAGC----CCGTGGTG--TACAGGTTGATTTCTC- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 42224 162 - 179258 -GCCCATTCGCGACCACCAGAGCGCCGCAGCTCAGGAGGC-CTG----TGATTGTGCAAAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTAGGCTTTCAC-AAACATAATTTCTATTACCTG-AAAAAACT-C-TTGGGC-CTCACGAAGC----CCGTGGTG--TACAGGTTGATTTCTC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5528120 162 - 5823884 -GCCCATTCGCGACCACCAGAGCGCCGCACCTCAGGAGGC-CTG----TGATTGTGCAAAAGGGG-AAGTGAGAAATGCCG-AAAGA-CTTAGGTTTTCAC-AAATATAATGTCTATTACCTG-AAAACACT-C-TTGGGC-CTCACGAAGC----CCGTGTTG--TACAGGTTGATTTCTC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10295 163 + 372756 -GTCCATTCCCGACC-CCAGAGCGCGACACCTCAGGAGGT-CTGCAACTGACTGTTCAAAAGGGG-ACGTGAGAAGTGCCG--GGGA-CTCAAGTTTTCAC-CGACATCATCTCTATTCCCTG-AAAAACCCTC-TTGCGC-C-CACGAAGC-----CACGCTG--CACATGTTGGTTTCTC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248664 128 + 16356641 -------------------------------------GGC-CTGCTACTGACTGTTCCGAGGGGG-AAGTGGGAAGTGCCG-CGGAA-CTCACGTTTTCAC-AAATACCGTCTCTATTCCCTG-AAAAACCC-C-TTGCGC-C-CACGAAGC-----CATGCTG--CACAAGTTGGTGTCTC- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22807966 157 + 22939663 -------GCCCTATTCCCAAAGCTACACACCTCAGAAAGC-CCA----TGATTGTTCAGA-GGGT-AAATGTGAAATGCTA-AGAGA-TGGAAGTTTGTGC-AAATATAATTTCTATTAGCTA-AAAAAAAT-CATTGTGC-CTCATGAAGT--CTCTCTGTTG--CACATATTGATTTCT-- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181765102 160 + 182113224 -GCATATTCTAGTCCACTGAGCTAAAACTCTCAAAGAAGC-TTG----TGGCTGCTTGAAGGGAT------AGAAATGCTG-ACAGA-CTGAGGTTTGTGC-AAAAACACTTTCCATTCCCTC-AGAAAATA-A-TGATGC-CCCACAAGGATTTTTTTTGTAG--CACATATTGGCTTCT-- i mm10.chr2 C 0 I 1 s canFam3.chr24 47576157 160 + 47698779 -GCCCCTTCGCGACCAC-GGAGCCACACACCTCGGGAAG--CTG----TGCTTGCTCAGTGGGGG-AGGTGTGGA-TGCTG-AAAGG-CAGAGGTTTGCAC-AAATACGATTTATGTTACCTG-GAAGACGA-G-CTATGC-AGCACCAGGG--CTCTTTGTGG--CACATACTGCTCTCT-- i canFam3.chr24 I 1 I 5 s dasNov3.JH569290 213544 157 - 397369 GTCGCATCT----CCACCAGAGCGCCTCATCTCAGGGAGC-TCA----TTGTTAGTCAAGGGGAG-AAATGCTAAGTGCTG-AAAGA-C--AAGCTTGTGC-AAATACAATTTCTGTTACCTA-AAAAAATA-G-TTATGC-TACACAAAGT-----CTTTTTGCTCACATGTGGGTTTCT-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56831081 155 + 57149010 I e cebCap1.NW_016107870v1 1117033 140 + 1231380 I e aotNan1.NW_018500483v1 2646294 145 + 11732439 I a score=45800.000000 s hg38.chr20_KI270870v1_alt 71137 6 + 183433 -CCTGCT s panTro5.chr20 66395962 6 + 66533130 -CCTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62076279 6 + 62195757 -CCTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461493 6 - 578057 -CCTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990278 6 - 110113093 -CCTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716781 6 - 92844088 -CCCGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384769 6 + 96509753 -CCCGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854991 6 - 16982598 -CCCGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3657274 6 - 3785965 -CCCGCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 42386 6 - 179258 -CCCGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5528282 6 - 5823884 -CCTGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10458 6 + 372756 -CCTGAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248792 6 + 16356641 -CCTGAT i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56831236 6 + 57149010 -CCTGTC i micMur3.chr18 I 155 C 0 s otoGar3.GL873542 22808124 6 + 22939663 -CCTGTA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181765263 6 + 182113224 -CCTTTT i mm10.chr2 I 1 C 0 s canFam3.chr24 47576322 6 + 47698779 -CCTGTT i canFam3.chr24 I 5 C 0 s dasNov3.JH569290 213701 6 - 397369 CCCCAT- i dasNov3.JH569290 C 0 I 1 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e cebCap1.NW_016107870v1 1117033 140 + 1231380 I e aotNan1.NW_018500483v1 2646294 145 + 11732439 I a score=950385.000000 s hg38.chr20_KI270870v1_alt 71143 83 + 183433 GCCACCTCCGCTTCGCTG-TGG-TTTCTTAGGTG--TGACTGT--TGCATATCTGAATTAAGTCGCTTTCATGAAACCTT-GGGTGTCGT s panTro5.chr20 66395968 84 + 66533130 GCCACGTCCGCTTCGCTGTTGG-TTTCTTA-GTG--TGACTGTTGTGCATATC-GAATTAAG-CGCTTTCATGAAACCTTGGGGTGTCGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62076285 83 + 62195757 GCCACCTCCGCTTCGCTG-TGG-TTTCTTAGGTG--TGACTGT--TGCATATCTGAATTAAGTCGCTTTCATGAAACCTT-GGGTGTCGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461499 83 - 578057 GCCACCTCCGCTTCGCTG-TGG-TTTCTTAGGTG--TGACTGT--TGCATATCTGAATTAAGTCGCTTTCATGAAACCTT-GGGTGTCGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990284 83 - 110113093 GCCACCTCCGCTTCGCTG-TGG-TTTCTCAGGTG--TGACTGT--TGCATATCTGAATCAAGTCGCTTTCATGAAACCTT-GGGTGTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716787 83 - 92844088 GCCACCTCTGCTTCATTG-TGG-CTTCTTAGGTG--TGACTGC--TGCATATCTGAATTAAGTCGCTTTCATGAAACCTT-GGGTGTTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384775 83 + 96509753 GCCACCTCTGCTTCATTG-TGG-CTTCTTAGGTG--TGACTGC--TGCATATCTGAATTAAGTCGCTTTCATGAAACCTT-GGGTGTTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16854997 83 - 16982598 GCCACCTCTGCTTCATTG-TGG-CTTCTTAGGTG--TGACTGC--TGCATATCTGAATTAAGTCGCTTTCATGAAACCTT-GGGTGTTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3657280 83 - 3785965 GCCACCTCTGCTTCATTG-TGG-CTTCTTAGGTG--TGACTGC--TGCATATCTGAATTAAGTCGCTTTCATGAAACCTT-GGGTGTTGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 42392 83 - 179258 GCCACCTCTGCTTCATTG-TGG-CTTCTTAGGTG--TGACTGC--TGCATATCTGAATTAAGCCGctttcatgaaacctt-gggtgttgc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5528288 83 - 5823884 GCCACCTCTGCTTCGTTG-TGG-TTTCTTCGGTG--TGACTGC--TGCATGTCTGAATTAAGTCGCTTTCATGAAACCTT-GGGTGTTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10464 83 + 372756 GCCACCTCTGCTTCGTGG-TGG-TTTCTTAGGCC--TGACTAT--TGCATGTCTGAATTAAGTCACTTTCATGAAACCTT-GGGTGTTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248798 83 + 16356641 GCCACCTCTGCTGCGCGG-TGG-CTTCTTAGGCC--TGACTAC--TGCATATCTGAATTAAGTCACTTTCAGGAAACCTT-GGGTGTTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1117173 83 + 1231380 GCCACCTCTGCTTCGTGG-TGG-TTTCTTAGGCC--TGACTAT--TGCACATCTGAGTTGAGTCACTTTCATGAAACCTT-GGGTGTTGT i cebCap1.NW_016107870v1 I 140 C 0 s aotNan1.NW_018500483v1 2646439 83 + 11732439 GCCACCTCTGCTTCGTGG-TGG-TTTCttaggcc--tgactat--tgcgtatctgaattaagtcactttcacgaaacctt-gggtgttgt i aotNan1.NW_018500483v1 I 145 C 0 s micMur3.chr18 56831242 85 + 57149010 GTCACCCCCATTTTGCTG-TTG-TTTCTTACGTTCTCAGCTAG--CACATGTCTGAATTAAATAGCTGTCAGGAAACACT-GGGTGTTGT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22808130 82 + 22939663 GTCACCTCTGTCTTGTGG-CTG-TTTCT---GCATTTAACTAT--TATGTATCTGAATTAAACAGCTTTCATGAAACATT-GGGTATTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181765269 81 + 182113224 GTCTTCTCTGTTT--GTG-TTA-TTTCTTAAGTT--TGATTAT--CATGAATCTGAATTAAATGGCTTTCCTGGAGTCTT-CAATACTGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47576328 81 + 47698779 GTCGCTTCTG-TTGGTTG-TTG-TTTCCTAACTT--TGACTGT--CACGTATCTGAACTAGAT-ACTTTGATGAAACACT-GGGTATTGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 213708 84 - 397369 GCCTCCTCTGTTTTGTTG-TTGTTTTCTTAAGTT--TAATTAT--TACATATATGAGTTAAACAGCTTTCACAGAACATT-GGGTGTTGT i dasNov3.JH569290 I 1 C 0 e proCoq1.NW_012150197v1 1825089 327 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=5397596.000000 s hg38.chr20_KI270870v1_alt 71226 358 + 183433 TGGGAAATAAGGCTGATTCAGCAAC---------GGCCCTCCCTTTGATTCTGTATTCATCATGGAACAAT----GGCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGGTGTAAGACATCCTAGCA--CTCACAGCATGTC-CAGAGGAGA-CAG-AAACGGCTTTTCAGGAGTGCTCTCAGCTGAATGTGTCCTTTTATA-CTAATGGATATAAGTTTATGACAGAAA-TT--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCGAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTTATGTCCTTGT s panTro5.chr20 66396052 356 + 66533130 --GGAAATAA-GCTGATTCACAAGC---------GGCC--TCCTTTGATTCTGTATTCATCATGGAACAAT-----GCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTG-CGATACAGAGTTTAATAGAATTTCTGAATCCGAAAGGTTTGGGGTGTAAGACATCCTGGCAAGCTCACAGCATGTCGCAGAGGAGAGCAG-AAACGGC-TTTCAGGAGTGCTCTCAGCTGAATGTGTCCTTTTATAGCTAAT-GATATAAGTTTATGACAGAAA-TT----A-AATGGTAGGCAAGTCATTGTGGAAACCTCGAACTGTTTCTGCATTAGACTAATTAATATTTCACGCCTCAGTTATGA-CAGT-GCAGGC-TGCATTTATGTCCTTGT i panTro5.chr20 C 0 I 17 s panPan2.chr20 62076368 358 + 62195757 TGGGAAATAAGGCTGATTCAGCAAC---------GGCCCTCCCTTTGATTCTGTATTCATCATGGAACAAT----GGCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGGTGTAAGACATCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-CAG-AAACGGCTTTTCAGGAGTGCTCTCAGCTGAATGTGTCCTTTTATA-CTAATGGATATAAGTTTATGACAGAAA-TT--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCGAACTG-TTCT-CATTAGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTTATGTCCTTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461582 358 - 578057 TGGGAAATAAGGCTGATTCAGCCAC---------GGCCCTCCCTTTGATTCTGTATTCATCACGGAACAAT----GGCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGGTGTAAGACATCCTAGCA--CTCACAGCATGTC-CAGAGGAGA-CAG-AAACGGCTTTTCAGGAGTGCTCTCAGCTGAATGTGTCCTTTTATA-CTAATGGATCTAAGTTTATGACAGAAA-TT--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCGAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTTATGTCCTTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990367 358 - 110113093 TGGGAAATAAGGCTGATTCAGCAAC---------GGCCCTCGCTTTGATTCTATCTTCATCATGGAACAAT----GGCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGGTGTAAGACATCCTAGCA--CGCACAGCATGTC-CAGAGGAGA-TAG-AAACGGCTTTTCAGGAATGCTCTCAGCCGAATGTGTCCTTTTATA-CTAACGGATATAAGTTTATGACAGAAT-TT--AAA-AATGGTAGGC-AGTCATTGTGAAAACCTCAGACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTTATTTCCTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92716870 357 - 92844088 TGGGAAATAAGGCTGATTCAGCAAC---------GGCCCTCCCTTTGATTCTATCTTCATCATGGAACAAT----GGCCCGCAAGCCTG-CCCAGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGATGGGAGACGTCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-TAG-AAACGGC-TTTCAGGAGTGCTCACAGCCGAGTGTGTCCTTTTGTA-CTGATGGATAGAAGTTTATGACAGAAT-TT--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCAAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTTATTTCCTTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96384858 357 + 96509753 TGGGAAATAAGGCTGATTCAGCAAC---------GGCCCTCCCTTTGATTCTATCTTCATCATGGAACAAT----GGCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGATGGGAGACGTCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-TAG-AAACGGC-TTTCAGGAGTGCTCACAGCCGAGTGTGTCCTTTTGTA-CTGATGGATAGAAGTTTATGACAGAAT-TT--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCAAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTTATTTCCTTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16855080 357 - 16982598 TGGGAAATAAGGCTGATTCAGCAAC---------GGCCCTCCCTTTGATTCTATCTTCATCATGGAACAAT----GGCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGATGGGAGACGTCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-TAG-AAACGGC-TTTCAGGAGTGCTCACAGCCGAGTGTGTCCTTTTGTA-CTGATGGATAGAAGTTTATGACAGAAT-TT--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCAAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTTATTTCCTTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3657363 357 - 3785965 TGGGAAATAAGGCTGATTCAGCAGC---------GGCCCTCCCTTTGATTCTATCTTCATCATGGAACAAT----GGCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGATGGAAGACGTCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-TAG-AAACGGC-TTTCAGGAGTGCTGTCAGCCGAGTGTGTCCTTTTGTA-CTGATGGATAGAAGTTTATGACAGAAT-TT--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCAAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTTATTTCCTTGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 42475 357 - 179258 tgggaagtaaggctgattcagcagc---------ggccctccctttgattcTATCTTCATCATGGAACAAT----GGCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGATGGAAGACGTCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-TAG-AAACGGC-TTTCAGGAGTGCTGTCAGCCGAGTGTGTCCTTTTGTA-CTGATGGATAGAAGTTTATGACAGAAT-TT--AAA-AATGGTAGGC-CGTCATTGTGGAAACCTCAAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCTTTTATTTCCTTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5528371 358 - 5823884 TGGGAAATAAGGCTGATTCAGCAAC---------GGCCCTCCCTTTGATTCTATCTTCATCATGGAACAAT----GGCCCGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTCGGGATGGAAGACATCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-TAG-AAACGGCTTTTCAGGAGTACTCTCAGCCGACTGTGTCCTTTTGTA-CTGATGGATATAAGTTTATGACAGAAT-TT--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCAGACTC-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTTATTTCCTTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10547 354 + 372756 TGGGAAATAAGGCTGATTCAGCAGT---------GGCCCTCCCTTTGATTCTATCTCCATCATGGAACAAT----GGCCTGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGATGTAAAACATCCTAG------CACAGTATGTC-CAGAGGAGA-TAG-AAATGGTTTTTCAGGAGATCGCTCAGCTGAATGTGTCCTTTTATG-CTAATGGATATAAGTTTATGAAAGAAT-TA--AAA-AATGGCAGGC-AGTCATTGTGGAAACCTCAAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCCTGCATTAATTTCCTTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16248881 358 + 16356641 TGGGAAATAAGGCTGATTCAGCAAT---------GGCCCTCCCTTTGATTCTATCTCCATCATGGAACAAT----GGCCTGCAAGCCTG-CCTGGCGCCTGCAGCCTACCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGATGTAAAACATCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-TAG-AAATGGGTTTTCAGGAGATCGCTTAGCTGAACGTGTCCTTTTATG-CTAACGGATATAAGTTTATTAAAGAAT-TA--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCAAGCTG-TTCT-CATTTGACTAATTAATATTTCAT-TCTCAGTT-TGACCAGT-GCAGGCCTGCACTAATTTCCTTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1117256 361 + 1231380 TGGGAAATAAGGCTGATTCAGCAAC---------GGCTCTCCCTTTGATTCTATCTCCATCATGGAACAATCCGGAGCCTGC-AGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGAAGGTTTGGGATGTAAAACATCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-TAG-AAATGGGTTTTCAGGAGATGGCTCAGCTGAATGTGTCCTTTTATG-CTAATGGATATAAGTTTATGAAAGAAT-TA--AAA-AATGGTAGGC-AGTCATTGTGGAAACCTCAAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCCTGCATTAATTTCCTTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2646522 358 + 11732439 tgggaagtgaggctgattcagcagt---------ggccctccctttgattcTATCTCCATCACGGAACAAT----GGCCTGCAAGCCTG-CCCGGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATCTCTGAATGCCGAAGCTTTGGGATGAAGAACATCCTGGCA--CTCACAGCATGTC-CAGAGGAGA-CAG-AAATGGTTTTTCAGGAGATGGCTCAGCTGAATGTGTCCTTTTATG-CTAATGGATATAAGTTTACGAAAGAAT-TA--AAA-AATGGTAGGT-AGTCATTGTGGAAACCTCAAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCAGTT-TGACTGGT-GCAGGCCTGCATTAATTTCCTTGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56831327 357 + 57149010 TGGGGAATACGGCTGATTCAGCACC---------GGCCCTCCCTCTGATTCTATCTCCATGCT-GAACAAT----GGCCCGCAAGGCTG-CCCTGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGGAGGTTTGGGATGTAAAATATCCCAGCA--CTCACAGCGTGTC-CAGAGGAGA-TAG-AAATGGCTTTTCAGGAGTGCTCTCAGCTGAATGTGTCCTTTTATG-CTAATGGATATGAGTTTATGAAAGAAT-AA--AAA-ACCGGTAGGC-AGTCATTGTAGGAGCCTCAAACTG-TTCT-CATTTGGCTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTCATTTCGTTTT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1825416 356 - 2029793 TGGGGAATAAGGCTGATTCAGCACC---------GGCCCTCTCTC-GATTCTATCTCCATCCT-GAACAAT----GGCCTGCAAGGCC--CCCTGAGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCGGAGGTTTGGGATGGAAAATATCCCAGCG--CTCACCGCGTGTC-CAGAGGAGA-TAG-AAATGGCTTTTCAGGAGTGCTCTCAGCTGAATGTGTCCTTTTATG-CTAATGGATATGAGTTTATGAAAGAATAAA--AAA-ACCGGTAGGC-AGTCATTGTAGGAGCCTCGAACTG-TTCT-CATTTGGCTAATTAATATTTCAT-CCTCAGTT-TGACCAGT-GCAGGCTTGCATTCATTTCCTTCT i proCoq1.NW_012150197v1 I 327 C 0 s otoGar3.GL873542 22808212 365 + 22939663 TGGGGAATAAGGCTGATTCAGCACCGGCCCTCCTGGCCCTCCCTTTGATCCAATCTTCATCAT-GAACAAT----GGTGGGCAAGGCTT-CCTTGAGCCTGTAGCCTGCCGATA-AGATTTTAATAGAATTTCTGAATGCTGGAGGTTT-GGATGTAAAATATCCCAGCA--CTCACAGCATGTC-CAGAGAAGA-TAG-AAATGGTTTTTCAGTAGTGCTCTCAGCTGAATGTGTCCTTTTATG-CTAATGGATATGAGTTTATGAAAGAAT-AA--AAA-ACTGGTAGGC-AGTCATTGTAGGAGCCTCAAACTA-TTCT-CATTTGGCTAATTAATATTTCAT-CCTCAGTT-TGATCAGT-GCAGGCTTGTGTTTATTTCCTTTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181765350 352 + 182113224 TGGG---TAAGGTTAATTCAACACA---------GGCTCTCCCTTCTACCCCACCTTCTCCTTATAACAAT----GGCACACAGTGCCA-CCCCGAGCCTGCATTCTGCCGATA-AGGCTTTAATAGAATTTCTGAATGCTAAAGGTTTGGGATGTAAAATATCC-AGCT--CTGACAGCTTGTT-CAGAGGAGA-TAG-AGGTGGATTTTCAGGAGTGCTCTCAGCCGAATGTGTCCTTTTATG-CTAATGGATAGGAGTTCACGAAAGAAT-AG--GAA-AATGGTGGGC-AATCATTGTAGGACTCTCAAA-TG-TCCT-CCCTGGGCTAATTAATATTTCAT-CTT--GTT-TGACCACTGGCAGGCTTGCATTTGTTTCATTTT i mm10.chr2 C 0 I 1 s canFam3.chr24 47576409 357 + 47698779 TGGGGGATACGGCTGATTCAGCACC---------GGCCCTCCCTTTGATTCTATCTTCCTGGCGGAACAAT----GGCGTGCAGGGCTG-CCTC-AGCCTGCAGCCTGCCGATA-AGAGTTTAATAGAATTTCTGAATGCCAAAGGTTTGGGATGTAAACTATCCCAGCG--CTCACCGCGTGTC-CAGAGGAGA-GA--AAATGGCTTTTCAGGAGAGCTCTCCACTGAATATGTCCTTCTATG-CTAATGCATATGAGCTCACAAAAGAAT-AA--AAACAATGCTAGGC-AGTCATTGTAGGAGCCTCAAACTG-TTCT-CATTTGACTAATTAATATTTCAT-CCTCGGTT-TGACCAGC-AAATGCTTGCGTTTATTTCCTTTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 213792 360 - 397369 TGTGGAGTAAGGCTGATTCAGCACC---------GACCCTCCCTCTGATTCTATCTGGA-GGTGGAACAAT----GGAGCTCCGCGTTGCCCCTGAGCCTGCAGCTTGCCGATA-AG-GTTTAATCGAATTTCTGAATGCCAAAGGTTTGGGATGTAAACTATCCCAGTG--CTCACAGCGTGTC-CAGAGGAGA-TAGAAAATGGCTTTTCAGGAGTGCTCTCAACTGAATAAGTCCTTTTATG-CTAATGGATGTGCACTTATGAAAGAAT-TAAAAAA-AATGGTAGGC-AGTCATTGTAGGAGCTTCAAACTG-TTCT-CATTTGGCTAATTAATATTTCAT-CTCAAGTT-TGACCAGT-GTTGGTTTGTACTTATTTCTTCTT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=186769.000000 s hg38.chr20_KI270870v1_alt 71584 13 + 183433 GCTCAATCTGAAC s panPan2.chr20 62076726 13 + 62195757 GCTCAATCTAAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461940 13 - 578057 GCTCAATCTAAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990725 13 - 110113093 GCTCAATCTAAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92717227 13 - 92844088 GCTCAATCTAAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96385215 13 + 96509753 GCTCAATCTAAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16855437 13 - 16982598 GCTCAATCTAAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3657720 13 - 3785965 GCTCAATCTAAAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 42832 13 - 179258 GCTCAATCTAAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5528729 13 - 5823884 GCTCAATCTAAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10901 13 + 372756 GCTCAATCTAAAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16249239 13 + 16356641 GCTCAATCTAAAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1117617 13 + 1231380 GCTCAATCTAAAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2646880 13 + 11732439 GCTCGATCTAAAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56831684 13 + 57149010 GCTCAATCTAAAT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1825772 13 - 2029793 GCTCAATCTAAAT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22808577 13 + 22939663 GCTCAATCTAAAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181765703 13 + 182113224 GCTTGAGCTAAAT i mm10.chr2 I 1 C 0 s canFam3.chr24 47576766 13 + 47698779 ACTCGCTCTAACG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 214152 13 - 397369 GCTCAATCGGAAA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e panTro5.chr20 66396408 17 + 66533130 I a score=7998450.000000 s hg38.chr20_KI270870v1_alt 71597 695 + 183433 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--ATG--TGTGC----GTATAAGAATCTAAGATACTTGC--CTTTGGGGTGAAGCTT-TTGGTTTGTATGTAACGTG---TAAAGCACAAACTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGCTCTCT--TAGAGAAAGCT--GTGTT--CAG-TTCT-GCCTCAGTCACACTTTTGGTGGCC----CGAGCCCTTTAGCGCTAATTAAG--TTGGGGT--ATTG-TGCTCTTGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGAAAT-CTC-TGCACTGAACTT----CTGAGATGTGAGTTTT-CTGCTTCTC-CAGCTGCCCTTGGACGGCGGCATCTTTGCAGGCGTCTCACA----------TTGAGTTTT--CACCCTTGTGTTTC-ACAGTTTCATTTCTAACATCCTGA---TTATGATAATGGACAATCGTTTGCCTGATTTATCAGTACAAGAAGGAGATTTGGGCCGCAAACAAG---AATACTCT-GGCTCTTGAGTTCTCTTACTGA-AGAAATTCCCAC-TTTATCC-CTGAATGTGGGGGAAAAT----ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGCTGCATAGAGAGTG-GGTGAGCACTTCTAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-TTGATTTTCACTGGATAGCTCCTTTCAGGCCGTTTATAAAAGAATCAGGA s panTro5.chr20 66396425 708 + 66533130 AATTGTCTCTTGTGT-CATTATTGTGTTTTAATTTGTTGACGGGATA--ATG--TGTGC----GTATAAGAACTCTAGATACTTGC--CTTTGGGGTGAAGC-T-TTGGTTT-TATGTAACGTG---TAAAGCACAAACTGTAATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTC--AAACATGCTCTCTAAAAGAGAAAGCT--G-GTT--CAGTTTCTGGCCTCAGTCACACTTTTGGTCGGC----CCGGCCCTTTCGCGCTAATTAAG-TTTGGGGT--ATTGTTGCTCTTGCATAATTTTCCAAGAAATGATGTTTACTGTCTGTTGAAATGCTCTTGCACTG-ACTT----CTGAGATGTGAGTTTT-CTGCTTCTCTCAGCTGCCCTTGGACGGCG--ATCTTTGCAGGCGTCTCACA----------TTGAGTTTTCGCACCCTTGTGTTTCAACAGTTTCGTTTCTAACATCCTGA---TTATGATAATGGACAA-CGTTTGCCTGA--TATCAGTACACAGAGGAGATTTGGGCCGCAAACAAG---AATACTCTCGGCTCTTGAGTTCCTGTACTGACAGAAATTCCTAC-TTTATCCGCTGAA-GT-GGGGAAAAT----ATCACAGAACTGGCAGATCGAGAAGGCAGACAGTCAGGCTGCATAGAGAGTGAGGTGAGCACTTCTAT------------TGTCTGTTGTTATGGAATTTTTTCATTCATTGATTTTCACT-GATAGCTCGCTTCAGGCCGTTTATGAAAGAATCAGGA i panTro5.chr20 I 17 C 0 s panPan2.chr20 62076739 695 + 62195757 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--ATG--TGTGC----GTATAAGAATCTAAGATACTTGC--CTTTGGGGTGAAGCTT-TTGGTTTGTATGTAACGTG---TAAAGCACAAACTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGCTCTCT--TAGAGAAAGCT--GTGTT--CAG-TTCT-GCCTCAGTCACACTTTTGGTGGCC----CGAGCCCTTTAGCGCTAATTAAG--TTGGGGT--ATTG-TGCTCTTGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGAAAT-CTC-TGCACTGAACTT----CTGAGATGTGAGTTTT-CTGCTTCTC-CAGCTGCCCTTGGACGGCGGCATCTTTGCAGGCGTCTCACA----------TTGAGTTTT--CACCCTTGTGTTTC-ACAGTTTCGTTTCTAACATCCTGA---TTATGATAATGGACAATCGTTTGCCTGATTTATCAGTACAAGAAGGAGATTTGGGCCGCAAACAAG---AATACTCT-GGCTCTTGAGTTCTCTTACTGA-AGAAATTCCTAC-TTTATCC-CTGAATGTGGGGGAAAAT----ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGCTGCATAGAGAGTG-GGTGAGCACTTCTAT------------TGTCTG-TGTTATGGATTTTTCTC-TTC-TTGATTTTCACTGGATAGCTCCTTTCAGGCCGTTTATGAAAGAATCAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 461953 692 - 578057 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--ATG--TGTGC----GTATAAGAATCTAAGATACTTGC--CTTTGGGGTGAAGCTT-TTGGTATGTATGTAACGTG---TAAAGCACAAACTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGCTCTCT--TAGAGAAAGCT--GTGTT--CAG-TTCT-GCCTCAGTCACACTTTTGGTGGCC----CGAGCCCTTTAGCGCTAATTAAG--TTGGGGT--ATTG-TGCTCTTGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGAAAT-CTC-TGCACTGAACTT----CTGAGATGTGAGTTTT-CTGCTTCTC-CAGCTGCCCTTGGACGGCGGCATCTTTGCAGGCGTCTCACA----------TTGAGTTTT--CACCCTTGTGTTTC---AGTTTCGTTTCTAACATCCTGA---TTATGATAATGGACAATCGTTTGCCTGATTTATCAGTACAAGAAGGAGATTTGGGCCGCAAACAAG---AATACTCC-GGCTCTTGAGTTCTCTTACTGA-AGAAATTCCTAC-TTTATCC-CTGAATGTGGGGGAAAAT----ATCACA-AACT-GCAGAT-GAGAAGGCAGACAGTCAGGCTGCATAGAGAGTG-GGTGAGCACTTCTAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-TTGATTTTCACTGGATAGCTCCTTTCAGGCCGTTTATAAAAGAATCAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109990738 704 - 110113093 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTCATTGA--GGATA--ATG--TGTGC----GTATAAGAATCTAAGATACTTGC--CTTTGGGGTGAAGCTTATTGGTTTGTATATAATGTG---TAAAGCACAAACTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGGTCTCT--TAGAGAAAGCTAAGTGTTTATAG-TTCT-GCCTCAGTCACACTTTTGGTGGCCCGAGCGAGCCCTTTAGTGCTAATTAAG--TTGGGGT--ATTG-TGTTCTTGCATAATTTGCCAAGAAATGATGTTTACTGTC-GTTAAAAT-CTC-TGCGCTGAACTT----CTGAGATGTGAGTTTT-CTGCTTCTC-CAGCTGCCCTTGGACGGCGGCATCTTTGCAGGCGTCTCACA----------TTGAGTTTT--CACCCTTGTGTTTC-ACAGTTTCGTTTCTAACATCCTGA---TTATGATAGTGGACAATCGTTTGCCTGATTTATCAGTACAAGAAGGAGATTTGGGCCGCAAACAAG---AATACTCT-GGGTCTTGAGTTCTCTTACTGA-AGAAATTCCTACATCTATCC-CTGAATGTGGGGGAAAAT----ATCACA-GACTGGCAGAT-GAGAAGGCAGACAGTCAGGCTGCATAGAGAGTG-GGTGGGCACTTCTAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-TTGATTTTCATTGGATAGCTCCTTTCAGGCCGTTTATAAAAGAATCAGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92717240 699 - 92844088 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--GTG--TGTGT------ACAAGAACCTAAGATACTTGC--CTGTGGGGTGAAGCTTATTGGTTTGTATGTAATGTG---TAAAGCACAAATTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGGTCTCT--TAGAGAAAGCTAAATGTTT-CAG-TTCT-GCCTCATTCACACTTTTGGTGGCC----CGAGCCCTTTGGTGCTAATTAA---TTGGGGT--ATTG-TGTTCTCGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGAAAT-CTC-TGCACTGAACTT----CTGAGACGTGAATTTT-CTTGTTCTC-CAGCTGGCCTTGGATGGCAGCATCTTTGCAGGTGTCTCACA----------TTGAGTTTT--CACCCTTGTGTTTC-ACAGTTTTGTTTCTAACATTCTGA---TTATGATAATGGACAATTGTTTGCCTGATTTATCAGTACAAGAAGGAGATTTGGGCCGCAAACAAG---AATACTCT-GGCCCTTGAGTACTCTTACTTA-AGAAATTCCTACATTTATCC-CTGAATGTGGGGAAAAAAAA--ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGCTGCATGGAGAGTG-GGTGGGCACTTCCAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-CTGATTTTCATTGGATAGCTCCTTTCAGGCCATTTGTAAAAGAATCAGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96385228 699 + 96509753 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--GTG--TGTGT------ACAAGAACCTAAGATACTTGC--CTGTGGGGTGAAGCTTATTGGTTTGTATGTAATGTG---TAAAGCACAAATTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGGTCTCT--TAGAGAAAGCTAAATGTTT-CAG-TTCT-GCCTCATTCACACTTTTGGTGGCC----CGAGCCCTTTGGTGCTAATTAA---TTGGGGT--ATTG-TGTTCTCGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGAAAT-CTC-TGCACTGAACTT----CTGAGACGTGAATTTT-CTTGTTCTC-CAGCTGGCCTTGGATGGCAGCATCTTTGCAGGTGTCTCACA----------TTGAGTTTT--CACCCTTGTGTTTC-ACAGTTTTGTTTCTAACATTCTGA---TTATGATAATGGACAATTGTTTGCCTGATTTATCAGTACAAGAAGGAGATTTGGGCCGCAAACAAG---AATACTCT-GGCCCTTGAGTACTCTTACTTA-AGAAATTCCTACATTTATCC-CTGAATGTGGGGAAAAAAAA--ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGCTGCATGGAGAGTG-GGTGGGCACTTCCAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-CTGATTTTCATTGGATAGCTCCTTTCAGGCCATTTGTAAAAGAATCAGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16855450 701 - 16982598 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--GTG--TGTGT----GCACAAGAACCTAAGATCCTTGC--CTGTGGGGTGAAGCTTATTGGTTTGTATGTAATGTG---TAAAGCACAAATTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGGTCTCT--TAGAGAAAGCTAAATGTTT-CAG-TTCT-GCCTCATTCACACTTTTGGTGGCC----CGAGCCCTTTGGTGCTAATTAA---TTGGGGT--ATTG-TGTTCTCGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGAAAT-CTC-TGCACTGAACTT----CTGAGACGTGAATTTT-CTTGTTCTC-CAGCTGGCCTTGGATGGCAGCATCTTTGCAGGTGTCTCACA----------TTGAGTTTT--CACCCTTGTGTTTC-ACAGTTTTGTTTCTAACATTCTGA---TTATGATAATGGACAATTGTTTGCCTGATTTATCAGTACAAGAAGGAGATTTGGGCCGCAAACAAG---AATACTCT-GGCCCTTGAGTACTCTTACTTA-AGAAATTCCTACATTTATCC-CTGAATGTGGGGAAAAAAAA--ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGCTGCATGGAGAGTG-GGTGGGCACTTCCAT------------TGTGTG-TGTTGTGGATTTTTCTC-GTC-CTGATTTTCATTGGATAGCTCCTTTCAGGCCATTTGTAAAAGAATCAGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3657733 699 - 3785965 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--GTG--TGTGT----GTACAAGAACCTCAGATACTTGC--CTGTGGGGTGAAGCTTATTGGTGTGTATGTAATGTG---TAAAGCACAAATTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACCTGGTCTCT--TAGAGAAAGCTAAATGTTT-CAG-TTCT-GCCTCATTCACACTTTTGGTGGCC----CGAGCCCTTTGGTGCTAATTAA---TTGGGGT--ATTG-TGTTCTCGCATAATTTACCAAGAAATGGTGTTTACTGTCTGTTGAAAT-CTC-TGCTCTGAACTT----CTGAGACGTGAATTTT-CCTGTTCTC-CAGCTGGTCTTGGATGGCAGCATCTTTGCAGGTGTCTCACG----------TTGAGTTTT--CACCCTTGTGTTT---CAGTTTTGTTTCTAACATTCTGA---TTATGATAGTGGACAATTGTTTGCCTGATTTATCGGTACAAGAAGGAGATTTGGGCCGCAAACAAG---AATACTCT-GGCCCTTGAGTACTCTTACTTA-AGAAATTCCTACATTTATCC-CTGAATGTGGGGGAAAAAAA--ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGCTGCATGGAGAGTG-GGTGGGCACTTCCAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-CTGATTTTCATTGGATAGCTCCTTTCAGGCCATTTGTAAAAGAATCAGAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 42845 700 - 179258 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--GTG--TGTGT----GTACAAGAACCTCAGATACTTGC--CTGTGGGGTGAAGCTTATTGGTGTGTATGTAATGTG---TAAAGCACAAATTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGGTCTCT--TAGAGAAAGCTAAATGTTT-CAG-TTCT-GCCTCATTCACACTTTTGGTGGCC----CGAGCCCTTTGGTGCTAATTAA---TTGGGGT--ATTG-TGTTCTCGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGAAAT-CTC-TGCTCTGAACTT----CTGAGACGTGAATTTT-CCTGTTCTC-CAGCTGGCCTTGGATGGCAGCATCTTTGCAGGTGTCTCACA----------TTGAGTTTT--CACCCTTGTGTTTC-ACAGTTTTGTTTCTAACATTCTGA---TTATGATAGTGGACAATTGTTTGCCTGATTTATCAGTACAAGAAGGAGATTTGGGCCGCAAACAAG---AATACTCT-GGCCCTTGAGTACTCTTACTTA-AGAAATTCCTACATTCATCC-CTGAATGTGGGG-AAAAAAA--ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGCTGCATGGAGAGTG-GGTGGGCACTTCCAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-CTGATTTTCATTGGATAGCTCCTTTCAGGCCATTTGTAAAAGAATCAGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5528742 690 - 5823884 AATTG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--ACG--TGTGT----GTACAAGAACCTAAGATACTTGC--CTTTGGGGTGAAGCTTATTGGTTTGTATGTAATGTG---TAAAGCACAAACTGT-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGGTCTCT--TAGAGAGAGCTAAATGTTT-CAG-TTCT-GCCGCATTCACACTTTTGGTGGCC----CGAGCCCTTTGGTGCTAATTAA---TTGGGGT--ATTG-TGTTCTCGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGAAAT-CTC-TGCACTGAACTT----CTGAGACGTGAATTTT-CTTGTTCTC-CAGCTGGCCTTGGATGGCAGCATCTTTGCAGGTGTCTCACA----------TTGAGTCTT--CA--------------CAGTTTTGTTTCTAACATTCTGA---TTATGATAATGGACAATTGTTTGCCTGATTTATCAGTACAAGAAGGAGATTTGGGCTGCAAACAAG---AATACTCT-GGCCCTTGAGTACTCTTACTTA-AGAAATTCCTACATTTATCC-CTGAATGTGGGAAAAAAAAAACACCACA-AACTGGCAGAT-GAGAAGGCAGACAGCCAGGCTGCGTGGAGAGTG-GGTGGGCACTTCTAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-CTGATTTTCATTGGATAGCTCCTTTCAGGCCATTTGTAAAAGAATCAGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 10914 698 + 372756 AATAG-CTC-TATGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--ATG--TGTGT----GTAGAAGAATCTAAGATACTTGC--CTTTGGGGTGAAGCTCATTGATTTGTATGTAATATG---TAAAGCACTAACTGC-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTC-AAACCTGCTGTCG--TGGAGAAAGCAGAATATTT-CAG-TTCT-GTCTCATTTACACTTTTGGTGGCC----TGGGCCCTTTAGCGCCAATTAAG--TTGGGGTTAATTG-TGTTCTTGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGCAAT-CTC-TGCATTTAACTC----CTGAGATGAGAGTTTTGCTGGTTCTC-CAGCTGGCCCCTGATGGTAGCATCTCTGCAGGTGTCTCACA----------TTCACTTTT--CATCCTTAGGTTTC---AGTTTAGTTTTTGACATCCTGA----TATGATAATGGACAACTGTTTGCCTGATTTATTAGTACAAGAAGGAGATTTGGGCCGCAAACAAGAATAATACTCT-GGCTCTCGATTACTTGTACTGA-GGAAATTCCTACATTTATCC-CTGAATGTCAGGCAAAAA----ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGTTGCATAAAGAGTG-GGTGGGCACGTCCAT------------TGTGTG-TGTTACGGATTTTTA----TC-TTCATTTTCATTGGATAGCTTC-TTCAGGCAGTTTGTAAAAGAATCAGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16249252 699 + 16356641 AATAT-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATG--ATG--TGTGT----GTACAAGAATCTAAGATACTTGC--CTTTGGGGTGAAGCTCATTGGTTTG-------TGTG---TAAAGCACTAACTGC-ATGTTA--------------AAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGCTCTCT--TGGAGAAAGCAAAATATTT-CAG-TTCT-GTCTCATTCACACTTTTGGTGGCC----TGAGCCCTTTAGTGCTAATTAAG--TTGGGGT--ATTG-TGTTCTTGCATAATTTACCAAGAA---ATGTTTACTGTCTGTTGCAAT-CTC-TGCACTGAACTC----CTGAGAAGAGAGTTTTGCTGGTTCTC-CAGCTGGCCCCTGATGGTAGCATCTCTGCAGGTGTCTCACAGTGTCTCACGTTCAGTTTT--CAGCCTTGGGTTCC---AGTTTAGCTTCTGACATCCTGA----TATGATAATGGAAAACCGTTTGCTTGATTTATTAGTACAAGAAGGAGATTTGGGCTGCAAACAAGAATAATACTCT-GGCTCTTGATTACTCTTACTGA-GGAAATTCCTACATTTATCC-CTGAATGT-GGGGGAAAA----ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGTTGCATAAAGAGTG-GGTGGGCACGTCCAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-TTCATTTTCATTGGATAGCTCC-TTCAGGCAGTTTGTAAAAGAATCAGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1117630 699 + 1231380 AATAG-CTC-TGTGTGCATT-TTGTGTTTT-ATTTGTTGA--GGATA--ATG--TGTGT----GTATAAGAATCTAAGATACTTGT--CTTTGGGGTGAAGCTCACTGGTTTGTATGTAACGTG---TAAAGCACTAACTGC-ATGTTA--------------GAAATAAG-------------------------------CCAC----TAA-----------GATTTTCAAAACATGCTCTGT--TGGAGAAAGCGAAATGTTT-CGG-TTCT-GCCTCATTCACACTTTTGGTGGCC----TGAGCCCTTTAGTGCTAATTAAG--TTGGGGT--ATTG-TGTCCTTGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGCAAT-CTC-TGCACTGAACTC----CTGAGATGAGAGTTTTGCTGGTTCTC-CAGCTGGCCCCTGATGGTAGCATCTCTGCAGGTGTCTCACA----------TTCAGTTTT--CACCCTTGGGTTTC---AGTTTAGTTTCTGACATCCTGA----TATGATAATGGACAACTGTTTGCCTGATTTATTAGTACAAGAAGGAGATTTGGGCCGCAAACAAGAATAATACTCC-GGCTCTTGATGACTCTTACTGA-GGAAATTCCTACATTTATCC-CTGAATGT-GGGGAAAAA----ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGTTGCATGAAGAGTG-GGTGGGCACGTCCAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-CTCGTTTTCATTGGATAGCACC-TTCAGGCAGTTTGTAAAAGAATCAGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2646893 697 + 11732439 AATAG-CTC-TGTGTGCATT-TTGTGTTTT-ATTCGTTGA--GGATA--ATG--TGTGT----GTATAAGAATCTAAGATACTTGC--CTTTGGGGTGAAGCTCACGGGCTTGTATGTAATGTG---CAAAGCACTAACCGC-ATGTTA--------------AAAATAAG-------------------------------CCAT----GAA-----------GATTTTCAAAACATGCTCTCT--TGGAGAAAGCGAAATGTTT-CAG-TTCT-GCCTCATTCACACTTTTGGTGGCC----TGAGCCCTTTAGTGCTAATTAAG--TTGGGGT--ATTG-TGTTCTTGCATAATTTACCAAGAAATGATGTTTACTGTCTGTTGCAAT-CTC-TGCACTGAACTC----CTGAGAC--GAGTTTTGCTGGTTCTC-CAGCT-GCCCCCGATGGTAGCGTCTCTGCAGATTTCTCACA----------TTCAGTTTT--CACCCTTGGGTTTC---AGTTTAGTTTCTGACATCCTGA----TATGACAACGGACAACTGTTTGCCTGAGTCATTAGTACAAGAAGGAGATTTGGGCCGCAAACAAGAATAATACTCT-GGCTCTTGATTACTTTTACTGA-GGAAATTCCTACATTTATCC-CTGAATGTGGGGGGAAAA----ATCACA-AACTGGCAGAT-GAGAAGGCAGACAGTCAGGTTGCATAAAGAGTG-GGTGGGCACGTCCAT------------TGTGTG-TGTTATGGATTTTTCTC-TTC-TTCACTTTCATTGGATAGCTCC-TTCAGGCAGTTGGTAAAAGAATCAGAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56831697 677 + 57149010 GAATG-CCC-TGCATGCATT-TTGTGTTTT-ATTTGTTGA--GAATA--ATG--TGTAT----GCATAAAAATCTAACATACTTGC--TGTTGGGATGAAGCTTATAGGTTTATATGTAATGTG---TAGAGCATGAACTGC-ATGTT---------------GAAATAAT----------------------------------C----TAA-----------TATTTTCAAAACATGCTCTCT--TAGAGAAAGCTAAATGTTT-TAG-TTCT-GTCTCATTCATACCTTTGGTGGCT----TGAGTCCTCTAGTGCGAATTAAG-GTGAGGGC--ATTT-T-TTCCTACATAATTTACCAAGACATGACATTTAGTGTCTGTTGAAGT-CTC-TGCACTGAACTT----CTGAGACATGAGTTTTACTAGTTCTC-CAGCTGGCCTGTGATG-----GTCTTTGCAGGTATCTGAAA----------TTCAGTTTT--CATACTTGTGTCTC-ACAGTATAGTTTCTAACATCCTGA----TATGACAAGAGACTA----------GATTTATCAGAACAAGAAGGGAATTTGGATAGCAAACAAG---AGCCCCCT-GGCTCTTGTGTAGTC-CATTGA-GGAAATTCCTATCTTTATCC-CTGAATGTGGAAAAAA------GTCACA-AACTGGCAGAT-GAGAAAGCACAGGGCCAGGGCGCACAGAG---G-GGCGGGCACTTCCAT----------TGTGTGTG-TGTTGTGGGCTTTTCTC-TTC-TCGGTTTTCATTGGATAGCTTGTTTCAGGCAGTTTAGAAAAGAGTTGGGA i micMur3.chr18 C 0 I 144 s proCoq1.NW_012150197v1 1825785 685 - 2029793 GATCG-CCC-TGCGTGCATT-TTGTGTTTT-ATTTGTTGA--GAATA--ATG--TGTGT----GTATAAAAATCTAACATACTTGC--TTTCGGGATGAAGCTCATAGGTTTATATGTAATGTG---CAGAGCATGAACTGT-GTGTT---------------AAAATGAT-------------------------------CTAC----TAA-----------TATTTTCAAAACATGTTCTCT--TAGAGAAAGCTAAATGTTT-TAG-TTCT-GTCTCATTCACACTTTTGGTGGCC----TGAGTCCTTTCGTGCTAATTGAG-GTGAGGGT--ATTT-T-TTCCTGCATAATTTACCAAGAAATGATATTTAGTGTCTGTTGAAAT-CTC-TGCGCTGAACTT----CTGAGACGTGAGTGTC-CTGGTTCTC-CAGCTGGCCTGTGATG-----GTCTTTGCAGGTATCCGAAA----------TTCAGTTTT--CATACT--TGTCTC-ACAGTGCAGTTTCTAACATCCTGA----TGTGACAAGAGACAATTGTTTGCCTGATTTATCAGGACAAGAAGGGGATTTGGATAGCAAGCGAG---AGCACCCT-GGCTCTTGTGTAGCC-TACTGA-GGAAATTCCTATCTTTATCC-CCGAATGTGGAAAAAA-------TCACA-GACTGGCGGAT-GAGGAAGCACACGGCCAGGTTGCACGGAG--TG-GGCGGGCGCTTCCAT------------TGTGTG-TGTCGTGGGCTTCTCTC-TTC-TTGGTTTTCATTGGATAGCTTGTTTCAGGCAGTTTGAAACAGAGTTGGAA i proCoq1.NW_012150197v1 C 0 I 4 s otoGar3.GL873542 22808590 687 + 22939663 GATTG-CCC-TGAATGCA-T-TTGTGTTTT-ATTTGTTGA--GAATA--ATGTCTGTGT----GCATAAAATTCTAACATACTTGC--CTTTGGGATGAAGCTTATCCATTTATATGTAATGCA---TAGAGCATGAACTGG-ATGTTA--------------AAAATAAT----------------------------------C----TAT-----------TATTTTCAAAACATGCTC-CT--TAGAGAAAGCTAAATGTTT-TAG-TTGT-ACCTCTTTCGCACTTTTGGTAGCC----TGTGTCCTTTACTGCTAATTAAG-GTGAAGAT--ACTT-TGTTTCTGTATAATTTACCAAGAAATGACAT----TGACAGTTGAAAT-CTC-TGCACTGATCCT----CTCAGATGAGAATGTGACTTGTGCTG-TGGCTGGCCCATGATG-TAGTGTCTTTGCAGGTATCTGAAG----------TTCAGTTTT--CATCCATGTGTTTC-ACAGCACAGTTTCTAAGATCCTGA---TTATCAGAACCAACAA----TTGCCAGATCTATCAGTACAAGAAGGGGATTTGGATAGCAAACAAG---AACACCCT-GGCTCTTGTATGGTCTCACTGA-GGAACTCCCTATATTTATCC-CTGAATGTGGAAAAAAAA----ATCTCA-AACTGGCAGAA-GAGAAAGCACATAG-CAGGTTGCCTGGAG--TG-GGCGGGCACTTCTAT------------TGTGTA-TGCTATGGGCTTTTCTC-TGC-TTGATTTTCATTGGATAGCTTGTTTCAGGCAGTTTAAAAGAGAGTTAGGA i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181765716 650 + 182113224 AAATG-CCC-CATATGAATT-TTGTATTTT-ACTTGT--A----------TG--TGTA-------AGAAATATCATACATAACTTCTGTTTCAGAACAAAGCTCCTTGTTTTATGTACAGTATA---TAGAGGATGAAGTAT-GTGTTA--------------GAAAGGATTGTTCATGAAGGAGAGGCTTCTGCTTACATTCCAC-----AA-----------GGTCCTTACAACCTGTTCTCC--TTGCAAAAACC-AGCATAC-TTG-CTCT-ATCTTATCCAGACTTCTGGTGGCC----CAAGCCTGTCTATGAAAATCAA---GCAGGAC--ATGG-TATTTCTGCACAACTTGCCAGGAAACAGTATTTGTTTTCTATTAAAAC---C-TGAAATGACCTCTGTGTTGTGCTGTGCATGCT--TTGTTTTC-TAGATG-----TGGCAGTAGTGTCTTCTCAGG-ATCATA-A----------TTTGGCTTT--CATTTTTGTGTTTT-CCAGTGCAATTTCCAGT---------------------------------TCTGATTTGTCAGTGTGAGGATGAGTTTGGGGTGACAAACGAA-------CCCG-GG-------GTTCTC---CTGA-GGTTGTTCCTGTGTTCAGCT-CTGTAAACTGAGAGAA------ACTGAG-AATTGGCAGGT-TAGGAGGTTGACAGGCAGGCTGTATCTCCAGGG----------------------------CGTGTG-TCCCACAGACTTTCC---TTC-TTGGTGTTTTGGCGGTCGCTCCTTGCAGACAGTGAATTTATGTTTCTAGG i mm10.chr2 C 0 I 4 s canFam3.chr24 47576779 678 + 47698779 GAGTG-CCC-CGTGCACATC-GTGCATTTT-GTTTGTTGC--GAAGAACATG--TGTGT----GTGTAAGGACCGAACACACTTGC--TTTTAGGGCCCAGCTCGGGGGGTTGCATGCAATGTGGGATGCAGCCCACATTGG-----TA--------------AAGATGAT-------------------------------CGCTCGTGTAAGAGTTTCAGCTGATTTTCAAAACATGCTTTCT--TAGAGGAAGCTAAATGTTT-TAA------GCCTTATTCGTGCGTTCCGTGGCC----TGAGCCGGTTCGTGCTGATTACC-TTGGGGGT--GTTG-TGCCCTTGCGGAAAGTAGCGGGCAATGATGTTTACTGA--GTTGAAAT-CTC-TGCCCTGAACTT--------GGTGGGG------CCGG---CC-TAGCCA---------------CTCTCCGCGGGCGCCTAAAT----------CCCGGCCCG--CGTCCT---GTCTC-ACTGTACAGTGTCTGACAACCTGAGGACGATGACGATGGGCACTCCCTCGCCCGACTTACGAGGAGGAAAAGGCAGTTGGGACAGTGAGCAAG---AATAGCCC-GGCTCCTGGGTCCGCGCACGGA-GGAGGTTCCTACGTTTATCC-CGGAAAGTGGAAAACAAG---------A-AAGTGGAAAAC-------------AATTTGGTGGCTTGAAGAGTA-GGTGGGCAGTTCCATtgtgtgtgtgtgtgtgtg-tgtgATGCCTTTTCCTC-CTC-TCGATTTTCATTGGGTAGCTCCTTGCAGGCAGTTTAC-AAAGACTCAAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 214165 690 - 397369 ----G-ATT-TCCATGCATT-TTGTGTTTT-ATTTGTTGA--GAATA--ATA--TGTGTATGTGTGTGTAGATATAATATGCTTGC--TTTTAAGATGAAGCTCATTGGTCTATATGTAACCAT---GAGAGCACACGCTGC-ATGTTATAATAACTGCTTTTGGAAGAAG-------------------------------AGTT----TTA--------GTTGATTTTCAAAATATGTTCTCT--TAGAGAAAGCTCTTTATTC-TAG-CTCT-GTTTCCTTCATGTTTTTGGCGGCC----TGAGCCCTTCAGTGCTAATTTAGTTTGGGGGA--GTTG-TGTTCCTGCAAAATTTACCATGAAATAATATTTGCTGTCAGTTGGAAT-CTC-TGCACTGAACTT----CTGTGCCAAGATCTGT-------CCC-GGGCTGTC----------GGCAGCTCTGCCCCTGTC----A----------CTCGGTTTG--CGTCCTTGTGCTTC-GCAGGGTATTTCTTAACGTCCTGG---TCATGATAATGGCCACCTCCTTGCCTGATGGACCGGGAAGGAAAGGGAATTGTGATAGTTGGCAAG---AACACCCT-GGCTACTGGGTGCTCTTCCTGA-GGAAAAGCC-ACATTTACCC-CCAAGAGTGGAAAAAA------TCCACA-ACCTG--AGAT-GAGAAAGTGATCCG--GGTTTGCCTAAAGAGTG-GGTGGAATTTCCCGT------------TGTGTG-TGTTGTGGA--TTTCTC-CTC-TTGATTTTCATTGGTTAGGTCATTTCAGGCAGTTTAAAAAGGACTTGGGA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=429549.000000 s hg38.chr20_KI270870v1_alt 72292 50 + 183433 ---AAAGAGC--AG------AAAACTTGGGCAGTGTG--CTTCGCTCTGGTTGCAATAAACTT s panTro5.chr20 66397133 52 + 66533130 ---AAAGAGGCAAG------AAAACTTGGGCAGTGTG--CTTCGCTCTGATTGCAATAAACAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62077434 50 + 62195757 ---AAAGAGC--AG------AAAACTTGGGCAGTGTG--CTTCGCTCTGGTTGCAATAAACTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 462645 50 - 578057 ---AAAGAGG--AG------AAAACTTGGGCAGTGTG--TTTCTCTCTGGTTCCAATAAACTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109991442 50 - 110113093 ---AAAGAGC--AG------AAAACTTGGGCAGTGTG--CTTCGCTCTGGTTGGAATAAACTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92717939 43 - 92844088 ---AAAGAGC--AG------AAAACTTGG-------G--CTTCGCTCTGGTTGGAATAAACTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96385927 43 + 96509753 ---AAAGAGC--AG------AAAACTTGG-------G--CTTCGCTCTGGTTGGAATAAACTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16856151 43 - 16982598 ---AAAGAGC--AG------AAAACTTGG-------G--CTTCGCTCTGGTTGGAATAAACTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3658432 43 - 3785965 ---AAAGAGC--AG------AAAACTTGG-------G--CTTCGCTCTGGTTGGAATAAACTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 43545 43 - 179258 ---AAAGAGC--AG------AAAACTTGG-------G--CTTCGCTCTGGTTGGAATAAACTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5529432 50 - 5823884 ---AAAGAGC--AG------AAAACTTGGGCAGTGTG--CTTCGCTCTGGTTGGAATAAACTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 11612 50 + 372756 ---AAAGAGT--AG------AAAACTTGGGCAGTGTT--CTTCCCTCTAGTCGGAGTAGACTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16249951 50 + 16356641 ---AAAGAGC--AG------AAAACTTGGGCAATGTT--CTTCCCTCTAGTCAGAGTAAACTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1118329 50 + 1231380 ---AAAGAGC--AG------AAAACTTGGGCAGTGTT--CTTCCCTCTAGTCGGAGTAAACTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2647590 49 + 11732439 ---AAAGAGC--AG------AAAACTT-GGCAGCGTT--CTTCCCTCTCGTCGGAGTAAACGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1826474 50 - 2029793 ---ACAGAGC--AG------AAAACTTGAGCAATGTG--CTTCCCTCTGGTTGGGACAAACTT i proCoq1.NW_012150197v1 I 4 I 30 s otoGar3.GL873542 22809279 50 + 22939663 ---AGAGAGC--AG------AAGACTTGTGCAGTGAG--ATTCCCTTTAGTTGGGACAAACTT i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181766370 35 + 182113224 ---GGATAGC--AGTGCTTAGAGATTTTTAAAGTGTT--TTT--------------------- i mm10.chr2 I 4 C 0 s canFam3.chr24 47577457 51 + 47698779 ---AGACAAC--AG------AAAACTTGAGCCGTGTGTCTTTCCCTCTGGCCGGGG-AAACTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 214855 44 - 397369 AAAGACGAAC--AG------GAAACTTGAGCGACGCG--CTTCCTCCGGGGGTG--------- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56832374 144 + 57149010 I a score=176446.000000 s hg38.chr20_KI270870v1_alt 72342 28 + 183433 AGTCTTTTT--GTGGGGGGGTTCCCATGCC s panTro5.chr20 66397185 27 + 66533130 AGTCCTTTT---TGGGGGGGTTCCCATGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62077484 27 + 62195757 AGTCTTTTT---GGGGGGGGTTCCCATGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 462695 29 - 578057 AGTCTTTTT-GGTGGGGGGGTTCCCATGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109991492 29 - 110113093 AGTCTTTTT-TGGGGGGGGGTTCCCATGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92717982 30 - 92844088 AGTCTTTTTAGGGGGTGGGATACCCAGGCC i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96385970 30 + 96509753 AGTCTTTTTAGGGGGTGAGATACCCAGGCC i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16856194 30 - 16982598 AGTCTTTTTAGGGGGTGGGATACCCAGGCC i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3658475 30 - 3785965 AGTCTTTTTAGGGGGTGGGATACCCAGGCC i cerAty1.NW_012001373v1 C 0 I 1 s manLeu1.NW_012101652v1 43588 29 - 179258 AGTCTTTTT-GGGGGTGGGATACCCAGGCC i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5529482 30 - 5823884 AGTCTTTTTAGGGGGTGGGATACCCATGCC i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chrUn_GL286459 11662 29 + 372756 AGTGTTTTT-AGGGGTGGGTTACCCATGCC i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16250001 29 + 16356641 AGTGTTTTT-AGGGGTGGGATACTCATGCC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1118379 29 + 1231380 AGTGTTTTT-AGGGGTGGGATACCCATGCG i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2647639 29 + 11732439 AGTGTTTTT-AGGGGTGAGGTACCCATGCC i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22809329 30 + 22939663 AGTGCTTTTATGGAGTGTGATCCCTGTGCT i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181766405 11 + 182113224 TGTTTGTTT-----GT-------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47577508 30 + 47698779 AGTGGTTTTAGGGCAGAGAGTACTTGTGCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 214899 24 - 397369 -AACCGTGT-GGTGAGGAGGTCTCCA---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1826524 30 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56832374 144 + 57149010 I a score=591915.000000 s hg38.chr20_KI270870v1_alt 72370 52 + 183433 CAGGAATCCCTGAGTTCTCTTTGG-GA-AGGTTTTTATTATTGTAAAAATTAAA s panTro5.chr20 66397212 54 + 66533130 CAGGAATCCCTGAGTTCTCTTTGGAGACAGGTTTTTATTATAGTAAAAATTAAA i panTro5.chr20 C 0 T 85471 s panPan2.chr20 62077511 52 + 62195757 CAGGAATCCCTGAGTTCTCTTTGG-GA-AGGTTTTTATTATTGTAAAAATTAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 462724 52 - 578057 CAGGAATCCCTGAGTTCCCTTTGG-GA-AGGTTTTTATTATTGTAAAAATTAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109991521 52 - 110113093 CAGGGATCCCTGAGTTCTCTTTGG-GA-AGGTTTTTATTATTGTAAAAATTAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92718013 52 - 92844088 CAGGGGTCCCTGAGTTCTCTTTGG-GA-AGGTTTTTATTATTGTAAAAATTAAA i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96386001 52 + 96509753 CAGGGGTCCCTGAGTTCTCTTTGG-GA-AGGTTTTTATTATTGTAAAAATTAAA i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16856225 52 - 16982598 CAGGGGTCCCTGAGTTCTCTTTGG-GA-AGGTTTTTATTATTGTAAAAATTAAA i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3658506 52 - 3785965 CAGGGATCCCTGAGTTCTCTTTGG-GA-AGGTTTTTATTACTGTAAAAATTAAA i cerAty1.NW_012001373v1 I 1 C 0 s manLeu1.NW_012101652v1 43618 52 - 179258 CAGGGATCCCTGAGTTCTCTTTGG-GA-AGGTTTTTATTATTGTGAAAATTAGA i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5529513 52 - 5823884 CAGGCATCCCTGAGTTCTCTTTGG-GA-AGGTTTTTATTATTGTAAAAATTAAA i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chrUn_GL286459 11692 51 + 372756 CAGGGATCCCTGAGTTCTCTTTGG-GA-AGG-TTTTATTATTGTAAAAATTAAA i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16250031 51 + 16356641 CAGGGATCCCTGAGTTCTCTTTGG-GA-GGG-TTTTATAATTGTAAAAATTAAA i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1118409 51 + 1231380 CAGGGATCCCTGAGTTCTCTTTGG-GA-GGG-TTTTATTATTGTAAAAATTAAA i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2647669 51 + 11732439 CAGGGATCCCTGAGTTCTCTTTGG-GA-AGG-TTTTATTATTGTAAAAATTAAA i aotNan1.NW_018500483v1 I 1 C 0 s proCoq1.NW_012150197v1 1826554 51 - 2029793 CGGGGACCCCCGAGTTCTCTCTGG-GA-TGG-TTTTATTATTTTAAAAATTAAA i proCoq1.NW_012150197v1 I 30 C 0 s otoGar3.GL873542 22809360 50 + 22939663 CAGGATTCCTCAAGTTCTTTTTGG-AA-TGG-TTTTATTGTTTT-AAAATTAAA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181766416 35 + 182113224 ---------------TTGTTTTGG-GA-GAA-CTTTAGTATCA-AAACATTAAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47577538 41 + 47698779 ----------CACGATCTCTCTGC-GA-GGA-TTTCATTATTTTAAAGCCTAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 214923 39 - 397369 ------------AGTTCTGGTTGA-GA-GGa-ttttattattttaaaaattaaG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56832374 144 + 57149010 I a score=74470.000000 s hg38.chr20_KI270870v1_alt 72422 11 + 183433 --GTGAAAAGGGA s panTro5.chr20 126759 11 - 66533130 --GTGAGAAGGGA i panTro5.chr20 I 3272 C 0 s panPan2.chr20 62077563 11 + 62195757 --GTGAAAAGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 462776 11 - 578057 --GTGAAAAGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109991573 11 - 110113093 --GTGAAAAGGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92718065 10 - 92844088 --GTGA-AAGGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96386053 10 + 96509753 --GTGA-AAGGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16856277 10 - 16982598 --GTGA-AAGGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3658558 10 - 3785965 --GTGA-AAGGGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 43670 10 - 179258 --GTGA-AAGGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5529565 10 - 5823884 --GTGA-AAGGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 11743 10 + 372756 --GTG-AAAGGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16250082 11 + 16356641 --GTGAAAAGGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1118460 11 + 1231380 --GTGAAAAGGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2647720 11 + 11732439 --GTGAAAAGGTA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1826605 11 - 2029793 --ACAAAGGGGGA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22809410 11 + 22939663 --ACAAAAAGGGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181766451 11 + 182113224 --ACAAAAAGGGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47577579 10 + 47698779 ---CCAAAAGAAA i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 214962 11 - 397369 ACAGAAAAAGG-- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56832374 144 + 57149010 I a score=17938399.000000 s hg38.chr20_KI270870v1_alt 72433 1104 + 183433 AAGTGTGAGAACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTGTGCATGACTCTATTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT----AAA----AAATACAT-----ATCCATTTAAGTCAGGGGTACTTGAATATGCAGATGAGCCGATATGTAATATTCCTGGTTCATTTGAGTAATAAATTCTGCAGCCCGCTCTTTATGATGGTAGATCATATTCCTCACCACCAATAAATATTGTAAAGTACTTTCGCTGTAGCCATGCTAACCCGGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTGATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---AAAAAA--ACTCAATCATGCTGCACATTGAGTATGAATCAGTGTGGACAAACATAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGACACAGG-A-CTCCACCGGACTGGGACACCTCTCAC-CCCCAATTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAACGTTACGTTCTTT--CTGACAAAGGCAGATACCCAACGCTTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGCGCGCGGGCAGAGTTAATTTCTAAGATGAAGGCTCTGTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG s panTro5.chr20 126770 1104 - 66533130 AAGTGTGAGAACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTGTGCATGACTCTATTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT----AAA----AAATACAT-----ATCCATTTAAGTCAGGGGTACTTGAATATGCAGATGAGCCGATATGTAATATTCCTGGTTCATTTGAGTAATAAATTCTGCAGCCCGCTCTTTATGATGGTAGGTCATATTCCTCACCACCAATAAATATTGTAAAGTACTTTCGCTGTAGCCATGCTAACCCGGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---AAAAAA--ACTCAATCATGCTGCACATTGAGTATGAATCAGTGTGGACAAACATAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGACACAGG-G-CTCCGCCGGACTGGGACACCTCTCAC-CCCCAGTTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCCCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAACGTTACGTTCTTT--CTGACAAAGGCAGATACCCAACGCTTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGCGCGCGGGCAGAGTTAATTTCTAAGATGAAGGCTCTGTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62077574 1104 + 62195757 AAGTGTGAGAACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTGTGCATGACTCTATTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT----AAA----AAATACAT-----ATCTATTTAAGTCAGGGGTACTTGAATATGCAGATGAGCCGATATGTAATATTCCTGGTTCATTTGAGTAATAAATCCTGCAGCCCGCTCTTTATGATGGTAGGTCATATTCCTCACCACCAATAAATATTGTAAAGTACTTTCGCTGTAGCCATGCTAACCCGGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---AAAAAA--ACTCAATCATGCTGCACATTGAGTATGAATCAGTGTGGACAAACGTAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGACACAGG-G-CTCCACCGGACTGGGACACCTCTCAC-CCCCAGTTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCCCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACTTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTGAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAACGTTACGTTCTTT--CTGACAAAGGCAGATACCCAACGCTTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGCGCGCGGGCAGAGTTAATTTCTAAGATGAAGGCTCTGTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 462787 1103 - 578057 AAGTGTGAGAACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTGTGCATGACTCTATTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT-----AA----AAATACAT-----ATCCATTTAAGTCAGGGGTACTTGAATATGCAGATGAGCCGATATGTAATATTCCTGGTTCATTTGAGTAATAAATTCTGCAGCCCGCTCTTTATGATGGTAGGTCATATTCCTCACCACCAATAAATATTGTAAAGTACTTTCGCTGTAGCCATGCTAACCCGGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---AAAAAA--ACTCAATCATGCTGCACATTGAGTATGAATCAGTGTGGACAAACGTAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGACACAGG-G-CTCCACCGGACTGGGACACCTCTCAC-CCCCAATTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAACGTTACGTTCTTT--CTGACAAAGGCAGATACCCAACGCTTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGCGCGCGGGCAGAGTTAATTTCTAAGATGAAGGCTCTGTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109991584 1105 - 110113093 AAGTGTGA-CCCAGAAAAATGTCT---TTTCCTGATCTATTCTTTTGTGTGCATGACTTTATTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCATT----AAA----AAATACAT-----ATCCATTTAAGTCAGGGGTACTTGAATATGCAGATGAGCCAATATATAATATTCCTGGTTCATTTGAGTAATAAATTCTGCAGCCCGTTCTTTATGATGGTAGGTCATATTCCTAACCACCAATAAATATTGTAAAGTACTTTCGCTGTAGCCATGCTAACCCAGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTATGTGTCTTGCTTTTT---AAAAAA--ACTCAGTCATGCTGCACATTGAGTATGAATCAGTGTGGACAAATGTAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGGGACAGG-G-CTCCACCGGCCTGGGACACCTCTCAC-CCCCAATTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGCTTTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAACCTTACGTTCTTT--CTGACAAAGGCAGATACCCAACGCTTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGCGCGCGGGCAGAGTTAATTTCTAAGATGAAGGCTCTGTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92718075 1104 - 92844088 AAGTGTGACCACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTGTGCATGACTTTGTTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT----AAA----AAATACGT-----ATCCATTTAAGTCACGGGTACTTGAATATGCAGATGAGCCAGTATGTAATATTCCCGGTTCATCTGAGTAATAAATTCTGCAGCCCGTTCTTTATGACGGTAGGTCATATTCCTAACCACCAATAAATATTGTCAAGTACTTTCGCTGTAGCCATGCTAACCCCGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---CAAAAA--ATTCAATCATGCTGCACATTGATTATGAATCAGGGTGGACAAATGTAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGGGACAGG-G-CTCCACTGGCCTGGGACACCTCTCAC-CCCCAGTTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACTGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCATGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGCCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATGTTACGTTCTTT--CTGACAAAGGCAGATACCCAATGCTTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGTGCGCGGACAGAGTTAATTTCTAAGATGAAGGTTCTCTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96386063 1104 + 96509753 AAGTGTGACCACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTGTGCATGACTTTGTTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT----AAA----AAATACGT-----ATCCATTTAAGTCACGGGTACTTGAATATGCAGATGAGCCAGTATGTAATATTCCCGGTTCATCTGAGTAATAAATTCTGCAGCCCGTTCTTTATGACGGTAGGTCATATTCCTAACCACCAATAAATATTGTCAAGTACTTTCGCTGTAGCCATGCTAACCCCGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---CAAAAA--ATTCAATCATGCTGCACATTGATTATGAATCAGGGTGGACAAATGTAGGCACCTTCTGTTGGCCGAGGCTCGGAGCA---GGGGACAGG-G-CTCCACTGGCCTGGGACACCTCTCAC-CCCCAGTTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACTGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGCCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATGTTACGTTCTTT--CTGACAAAGGCAGATACCCAATGCTTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGTGCGCGGACAGAGTTAATTTCTAAGATGAAGGTTCTCTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16856287 1104 - 16982598 AAGTGTGACCACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTGTGCATGACTTTGTTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT----AAA----AAATACGT-----ATCCATTTAAGTCACGGGTACTTGAATATGCAGATGAGCCAGTATGTAATATTCCCGGTTCATCTGAGTAATAAATTCTGCAGCCCGTTCTTTATGACGGTAGGTCATATTCCTAACCACCAATAAATATTGTCAAGTACTTTCGCTGTAGCCATGCTAACCCCGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGTGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---CAAAAA--ATTCAATCATGCTGCACATTGATTATGAATCAGGGTGGACAAATGTAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGGGACAGG-G-CTCCACTGGCCTGGGACACCTCTCAC-CCCCAGTTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACTGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATGTTACGTTCTTT--CTGACAAAGGCAGATGCCCAATGCTTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGTGCGCAGACAGAGTTAATTTCTAAGATGAAGGTTCTCTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3658568 1103 - 3785965 AAGTGTGACCACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTGTGCATGACTTTGTTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT----AAA----AAATACGT-----ATCCATTTAAGTCACGGGTACTTGAATATGCAGATGAGCCAGTATGTAATATTCCCGGTTCATCTGAGTAATAAATTCTGCAGCCCGTTCTTTATGACGGTAGGTCATATTCCTAACCACCAATAAATATTGTCAAGTACTTTCGCTGTAGCCATGCTAACCCCGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---CAAAAA--ACTCAATCATGCTGCACATTGATTATGAATCAGGGTGGACAAATGTAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGGGACAGG-G-CTCCACCGGCCTGGGACACCTCTCAC-CCCCAGTTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATGTTACGTTCTTT--CTGACAAAGGCAGATACCCAATGCTT-GCTTTTCCTCTTGGACAGAGACAGGGAGAGGGTGCGCGGACAGAGTTAATTTCTAAGATGAAGGTTCTCTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGTCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 43680 1103 - 179258 AAGTGTGACCACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTGTGCATGACTTTGTTTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT----AAA----AAATACGT-----ATCCATTTAAGTCACGGGTACTTGAATATGCAGATGAGCCAGTATGTAATATTCCCGGTTCATCTGAGTAATAAATTCTGCAGCCCGTTCTTTATGACGGTAGGTCATATTCCTAACCACCAATAAATATTGTCAAGTACTTTCGCTGTAGCCATGCTAACCCCGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---CAAAAA--ACTCAATCATGCTGCACATTGATTATGAATCAGGGTGGACAAATGTAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGGGACAGG-G-CTCCACCGGCCTGGGACACCTCTCAC-CCCCAGTTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGTACGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATGTTACGTTCTTT--CTGACAAAGGCAGATACCCAATGCTT-GCTTTTCCTCTTGGACAGAGACAGGGAGAGGGTGTGCGGACAGAGTTAATTTCTAAGATGAAGGTTCTCTTTGCAGGAAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGGTCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5529575 1103 - 5823884 AAGTGTGACCACAGAAAAATGTCT---TTTCCTGATCTATTC-TTTGTATGCATGACTTTGTGTTTTGGTCTGTGGCTATAGTT-ACCTTTTATGCCGTT----AAA----AAATACGT-----ATCCATTTAAGTCACGGGTACTTGAATATGCAGATGAGCCAGTATGTAATATTCCTGGTTCATCTGAGTAATAAATTCTGCAGCCCGTTCTTTATGACGGTAGGTCATATTCCTAACCACCAATAAATATTGTCAAGTACTTTCGCTGTAGCCATGCTAACCCCGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGGAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATGCTCTCTGCCCTTTTGTGTGTTTTGCTTTTT---CAAAAA--ACTCAATCATGCTGCACATTGATTATGAATCAGGGTGGGTAAATGTAGGCACCTTCTGTTGGCCGAGGCTCAGAGCA---GGGGACAGG-G-CTCCACCGGCCTGGGACGCCTCTCAC-CCCCAGTTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCGCTGCACGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAGGAGGACAGACAATAGCGGTGGGGAAAGGTAAGTCAATGTTACGTTCTTT--CTGACAAAGGCAGATACCCAATGCTTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGTGCGCGGACAGAGTTAATTTCTAAGATGAAGGCTCTCTTTGCAGGGAAAGCAGGTCTGAGGATGGCTTTTTGAAACTGCTCTGGAGGACGGGG-CTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 11753 1107 + 372756 ACATGTGATAACAGAAAAATGTCT---TTTGCTGATCTATTC-TTTGTGTGCATGACTTTATTTGTTGGTCTGTGGCTATAGTT-ACCTTTTATGCAGTT---AAAA----AAATACAT-----ATCCATTTATGTCATGGGTACTTGAATATGCAGATGAGCCAATATGTAATATTCCTTGTTCATTTGAGTAATAAATTCTGCAGCCCGTTCTTTATGATGGAAGGTCATATTCCTAACCACCAATAAATATTGTAAAGTACTTTCGCTGTAGCCATGCTAACCCAGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATACTCTCTGCCCTTTCGTGTGTTTTGCATTTAAAAAAAAAA--ACTCAGTTGTGCTGCACATTGATTATGAATCAATGTGGACAAATGTAGGCACCTTCTGTTGGCCGAGCCTCCAAGCA---GGGGACAGT-T-CTCTGCTGGCCTCGGACACCTCTCAC-CCCCAATTCACCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCG-TGTAAGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATGTTATGTTCTTT--CTGACAAAGGCAGATACCCAATGCCTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGCGCGAGGGCAGAGTTAATTTCTAAGATGAAGGCTCTCTTTGCAGGAAAGGCAGGTCTGAGGGTGGCTTTTTGAAACTGCTCAGGAGGACTGATGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16250093 1107 + 16356641 CCATGTAATAACAGAAAAATGTCT---TCTGCTGATCTGTTC-TTTGTGTGCATGACTTTATTTGTTGGTCTGTGGCTATAGTTAACCTTTCATGCAGTT---AAAA----AAATACCT-----ATCCATTTATGTCACAGGTACTTGAATATGCAGATGAGCCAATATGTAATGTTCCTGGTTCGTTTGAGTAATAAATTCTGCAGCCCGTTCTTTATGATAGAAGGTCATATTCCTAACCACCAATAAATATTGTAAAGTACTTTCGCTGTAGCCATGCTAACCCAGGGCATCTGTCATTCC--CGTTGCCGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATACTCTCTGCCCTTTTGCGTGTTTTGCA-TTAAAAAAAAAA--ACTCAGTCGTGCTGCACATTGATTATGAATCACTGTGGACAAACCTACGCACCTTCTGTTGGCCGAGGCTCCAAGCA---GGGCACAGG-G-CTCTGCCGGCCTGGGACACCTCTCAC-CCCCAATTCAGCGGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCG-TGTAAGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCCCCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATGTTATGTTCTTT--CTGACAAAGGCAGATACCCAATGCCTGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGCGCGAGGGCAGAGTTAATTTCTAAGATGAAGGCTGTCTTTGCAGGAAAGGCAGGTCTGAGGGTGGCTTTTTGAAACTGCCCTGGAGGACTGAGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1118471 1101 + 1231380 ACGTGTGATAACAGAAAAATGTCT-----TGCTGATCGATTC-TTTGTGTGCATGAC--TATTTGTTGGTCTGTGGCTATAGTT-ACCTTTTATGCAGTT---AAAA----AAATACAT-----ATCCATTTATGTCACGGGTACTTGAATATGCAGATGAGCCAATATGTAATATTCCTGGTTCATTTGAGTAATAAATTCTGCAGCCCGTTCTTTATGATGGAAGGTCATATTCCTAACCACCAATAAATATTGTAAAGTACTTTCGCTGTGGCCATGCTAACCCAGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCACAGAAAGCAGAGGGGGGTGAATGTGGTGGTTGTAATACTCTCTGCCCTTTTGTGTGTTTTGCA-TTTAAAAAAAAA--ACTCAGTCGTGCTGCACATTGATTATGAATCAGTGTGGACAAATACAGGCACCTTCTGTTGGCCGAGGCTCCGAGCA---GGGCACAGG-G-CTCTGCCGGCCTGGGACACCTCTCAC-CCCCGATTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCG-TGTAAGGGAGGCAGCTGCCTTCCCTCTCCTCCCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGTGGAAAGGTAAGTCAATGTTATGTTCTTT--CTGACAAAGGCAGATACCCAAAGCCCGGCTTTTCCTCTTGGACAGAGACAGGGAGAGGGCGC-AGGGCAGAGTTAATTTCTAAGATGAAGGCTCTCTCTGCAGGAAAGGCAGGTCTGAGGGTGGCTTTTTGAAACTGCTCTGGAGCGCTGAGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2647731 1105 + 11732439 ACATGTGATAACAGAGAAATGTCT---TTTGCTGATGTGTTC-TTTGTGTGCATGACTTTGTCTGTTGGTCTCTGGCTATAGTT-ACCTTTTATGCAGTT---AAAA----AAATACAT-----ATCTGTTTATGTCACAGGCACTCGAATATGCAGATAAGCCAATATGTAATATTCCTGGTTCATTTGAGTAATAAATTCTGCAGCCCGTTCTTTATGATGGAAGGTCATATTCCTAACCACCAATAAATATTGTAAAGTGCTTTCCCTGTAGCCATGCTAACCCAGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAGCAGAGGGGGGTGAATGTGGTGGTTATAATACTCTCTGCCCTTTTGTGTGTTTTGCATTAAAAAAAAAAA--ACTCAGTCGTGCTGCACACTGATTATGAATCCGTGTGGACAAATGCAGGCACCTTCTGTTGGCCGAGGCTCCGAGCA---GGGGACAGG-G-CTCTGCCGGCCTGGGACACCTCTCGC-CCCCAATTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCAGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAACCCGCACGCAGGCTTCCCCACATGTGACCG-CGGAAGGGAGGCAGCTGCCTTCCCTCTCCG-CCCC-AGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC--TTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCCGTGGGGAAAGGTAAGTCAACGTTGTGTTCTTT--CTGACAAAGGCAGACACCCAACGCCTGGCCCTTCCTCTCAGACGGAGACAGGGAGAGGGCGCGAGGGCACAGTCAGTTTCTAAGATGAAGGCTCTCTTTGCAGGAGAGGCAGGTCTGAGGGTGGCTTTTTGAAACTGCTCTGGAGGACTGAGGCTTTCTTCTCCTCCCTGGCCTG--CCGTGTGCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56832518 1100 + 57149010 AAGTGTGACAACAGAAAAATGTAT---TTTCCTGATCTATTC-TTTGTGCACATGACTTTATTTTTTGGTCTGTAGCCATAGGT-ACCTTTGATGCAGTT---AAAAACACACACACAC-----ATCCATTTAAGTCACTGGTACTTGAATATGCAGATGAGCCAATATGTGATATTCCTGGCTCACTTGAGTAATAAATTCTGCAGCCTGTTCTTTACGACGGTAGGTCATATTCCTAACCACCAATAAATATTGTAAAGTACTTTCGCTGCAGCCATGCTAACCCAGGGCATCTGTCATTCC--GGTCGCTGCTATTAGGAATTATTGGACTGAACCACTGGCACAGGAAGCAGAGGGGGGTGAGCA-GGCAGCTGTAATGCTCTCTGCCCTTTTGTGTGTCTCGCACTGA---AAAAAAACCCTCAA-CATGCTGTACATAGATTATGGATCAGTGTGGGCAAGTGTGGGCACCTTCTGTTGGCTGAGGCTCAGAGCA---GGGCACGGG-G-CTCTGCCAGCCT-GGGCACCTCTCAC-CCCTGACTCCCCAGACCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGCGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTGCGCCAGCCCGTGCCACC---GCTAATGAGAGCCGTCATTAAGTAAATGAGACGTCGCCGTTAGCTGGCTTAGGAGTTCGCACACTAAGGGGAGAAGATATTTAATTGAAATCCGCACACAGGCTTCCCCACATGTGACCGCTGCGAGGGAGGCAGCTGCCTGCCCTCTCCTCCCCCAAGTCCACCCGGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATCTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATGCTATGTTCTTTCGCTGACAAAGGCAGATACCCAGTGCCTGGCTTTCCCCC-TGGACAG---CGGGGAGAGGGCGTGCGGGCAGAGTTGATCTCTAAGGCGAAGGCTTTCTTTACGGGCAGAGCAGGTCTGGGG-TGGC-TTTTAAAGCTGCCCTGGAGGACTGAGGCTTTCTTCTCCT-CCC-GTctg--ctgtgcgctg i micMur3.chr18 I 144 I 28 s proCoq1.NW_012150197v1 1826616 1099 - 2029793 GAGTGTGACAACGGAAAAATGTAT---TTTCCCGATCTATTC-TTTGTGTGCCTGACTTTATTTTTTGGTCTGTAGCCATAGGT-GCCTTTTATGCAGTT---AAAAA---AAAAACAC-----ATCCGTTTAAGTCACCGGTCCTTGAATATGCAGATGAGCCAACATGTAATATTCCCGGTTCACTCGAGTAATAAATTCTGCAGCCTGTTCTTTACGACGGTAGGTCATATTCCTAACCACCAATAAATATTGTAAAGTACTTTCGCCGTAGCCAGGCTAACCCAGGGCATCTGTCATTCC--GGTCGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGGAAGCAGAGGGGGGTGAGCA-GGCAGCTGTGATGCTCTCTGCCCTTTTGTGTGTCTCGCATTAA---AGAAAAAACCTCAA-CGTGCTGAATATAGAGTACGAATCGGCGTGGGCAAGCGTGGGCACCTTCTGTTGGCTGAGGCTCAGAGCA---GGGGAC-GG-G-CTCTGCCGGCTTGGGGCACCTCTCAC-CCCTAACTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGCGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACC---GCTAATGAGAGCCGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTGAGGGGAGAAGATATTTAATTGAAACCCGCACACAGTCTCCCCCACATGTGACCGCTGCGAGGGAGGCAGCTGCCTTCCCTCTCCTCCCCCAAGTCCACCCTGCACCCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAACGCAGTGTTCTTTTGCTGACAAAGGCGGGTATCCGATGCTCGGCTTTCCCC---GGACAG--ACGGGGAGAGGGCGTGT-GGCCGAGTTAATTTCTGAGATGAA-GCTTTCCTTACGGGAAAAGCAGGTCTGGGGATGGCTTTTTAAAGCTGCTCTGGAGGACCGAGGCTTTCTTCTCCTCCCC-GTCTG-CCCGTGCGCCG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22809421 1088 + 22939663 AAGTGTGACAACAGAAAAATGTCT---TTTCCTAATCTATTC-TTTGTGTGCATGACTTTATTTTTTGGTCTGTGGCCATAGGT-ACCTTTTATGCAGTT---AAAA----AAATACAT-----GTTCATTTAGGTCACTTGTACTTGAATATGCAGATGAGCCAATATGTAATATTCCTCATTCATTTGAGTAATAAATTCTGCAGCCTGTTCTTTATGATGGTAGGTCATATTCTTAACCACCAATAAATATTGTAAAGTACTTTTGCTGTAGCCATGCTAACCCAGGGCATCTGTCATTCT--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGCAGAGAAAACAGAGGGGGGTGAGCCTGGCAATTGTAATGCTCTCTGCCCTTTTTTGTATCTTGCATTTA---AAAAAA--TCTCAATCATGCTGTATATCAATTATGAATCAGTGTG-------GCAGGCACCTTCTGTGGGCTGAGACTCAGAGCA---GGTGATGAG-G-GTCCTCCAGCCTGGGGCACCTCTCTC-CCCTAACTCAGCAGATTCATCTTTCTGGTGCTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGCGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAACCCGTGCCACC---GCTAATGAGAGCCGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAGTTCGCACACTAA-GGGAGAAGATATTTAATTGAAATCCGCACACAGGCTTCCCCACATGTGACCACTGCGAGGCAGGCAGCTGCCTTCCCTCTCCTCCCCCAAGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAACGCTATGCTCGCTTACTGACAAAGGCAGATATCCAATGCTGGGTTTTTCCCCTTGGACAG--ACGGGGAGAGGGCGTGGGGGCAGAGTTAATTTCTAAGATAAAGCCTTTCTTTACAGGAAAAGCAGATCTAGGGATGGC-TTTTTAAACTGATCTGGAGGAAGGAGGCTTTCTTTTCCTCCCT-GTCTG-------CACTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181766462 1075 + 182113224 AAGTGTG-TCATTGAAAAACATCT---TTT-CTGCTCTGTTC-CTTGTGAATATACTTTACTGTTTCAATCTTTGACCTTAGGT-ATCATTTCTG---------AAA----AAAAA--------ATCCACCCTAATTCCTGGTACTTCCATATGAAGATGAACC--CATATAACACTTTTAGTTCATTTGAGAAATAAATTCTGCAATCCATTTTTTATGATGGGAGGTTGTATTCCTAACCACCAATAAATATTGTAAAGCACTTTCGCCAGAGCCATGCTAACCCAGGGCATCTGTCATTCC--GGTCGCTGCTATTAGGAATTATTGGACTGAACCACTTGCAGAAAAAGAAGAGGGGAGTGAGCATGGTTGGCATAATGCTTCTTGCTCTTTTGTGTGTTTTACATTT----GATAAA--ACCCAATCATGCTGTATATTGATTATAGATATATTTAGGCAGATTTGGGCACATT-TGTTGG-TGAGGCTCAGAACA---GTAAACAGGAA-AGCTATTGGTTTGGAGCACCTCTCAC-CTTCAACTTGGCAGATCCATCTTTCTGATGTTATACTGTAAATTTATTTCACCTCAGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCGGTCATTAAGTAAATGAGACATCGCCTTTAGCTGGCTTAGGAGTTCGCACACTGAGGGGAGAAGATATTTAATTGAAACCCACACACAGGCTTCCCCACACGTGACTGCGGTGAGGGAGGCAGCTGCCTTCC----CCTCCCCC--GTCCTCCCCCCACCCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATGTTATGTTCTTTTGCTGACAAAGGCAGATACCCAGGGCTTAGCTTTTCCCCTTGGACAGAG-------GGGAGGGCTAGAGCAGAGAGGATTTCTAAG---AAAGCTCTCTTTGCAGAAAAAGCAGGTTGGGGGATGTCTTTTT-AAATTGTTCTGAAGGAC-AAGGCTTTCTTCTCCCTGTCTGCCTGGGCTGTGTG--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47577590 1103 + 47698779 ACGTGTGATGAAAGGCGGATACCTTTTTTTCCTGATCTATTC-TTTGTGCATATGACTTTATTTTTGGGTCTGTGGCCATAGAC-ACCTTTCATGAACTTTTAAAAA----AAATACATGCATAATCCTTTTAAGTCACTGATCCTTGAACATGCAGATGAACCACTATGCAACCCCCCTGGTTCATCTGAGTAATAAATTCCGCAGTCCGTTCTTTATGATGGTAGGTCATATTCCTAACCACCAATAAATATTGTAAAGTACTTTCGCTGCAGCCGTGCTAACCCGGGGCATCTGTCATTCC--GGTTGCTGCTATTAGGAATTATTGGACTGAACCACTGGTGGAGACAGCACAGGGGGGTGAGTATGGCGGTTGTGACGCTCTCTGCCCTTTTGTGTGTTTTGCATT-----AAAAAA--CCCCAATCATGCGGCATATTAATTATGATTCAGCGTGGGCAAACGCAGGCACCCTCTGTTGGCTGATGCTTGGGGCA---GGAGAGAGG-GTCTCTGCCGGCCTGGG-CACCTCTCACTTCCCAAGTCAGCAGATCCATCTTTCTGATGCTATACTGTAAATTTATTTCACCTCGGAGAGTAAACAGATATATTGGAGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCT-CTCCGCCAGCCCGTGCCACCGCTGCTAATGAGAGCGGTCATTAAGTAAATGAGACGTCGCCTTTAGCTGGCTTAGGAG-TCGCACACTAAAGGGAGAAGATATTTAATTGAAACCCGCACACAGGCTTCCCCACATGTGACCGCGGTGAGGGAGGCAGCTGCCTCCCCT------CCCC-CGTCCACCCTGCA-CCCCCCATGTAAATTTCATGATTGC-TTTCCGTGATGTCATTTTGAAGGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCCGTGTTCTGCTCTCTCGCTGACAAAGGCAGATCTCCAA------GTGCTTCCCCTTGGACCGAGGCAGGGAGAGGGCGCGCGAGCAGAGTGCATTTCTAAGATGAAGGCTTTCTTTGCAGGAAAAGCAGGTCGGGGGATGGCTTTTTAAAGCTGCTCTGTTGGACCGAGGCTGCCTCCTCCTGCCGGGTCTG--CCCGTGGCTG i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 214973 1058 - 397369 AAGTGTGAAAAGAGGAAAATGCTT---TTTCCTGATCTATCC-TTTGTGTGTCT-------TTTTTGTGCCTGTGGCCATAAAC-ACATTTTATGCACTT----AAA----AAATACAA-----ACT-----------------CTTGAATATTCAGATGAGCCGACATGTAGTATTGCCAGTGCATCTGGGAAATAACTTCTGCAGTCCGTTCTTTATGATGAGAGGTCATATTCCTAACCACCAATAAATATTGTGAAGCACTTTTGCTGTA-CCGTGCTAACCCA-GGCATCTGTCATTCCCGGGTTGCTGCTATTAGGAATTATTGGACTGTACCACCGGCAGGGAAAGCAGAGGGGGGTGAGGATGGCAGTTGCAACCCTCTCTGCCCTTTTGTGTGTTTTGCATA-----AAAGAA--CCCCAATCATGCTGCATATAAATTATGAATCCGTGTGGGCAAACTCAGGCACCTCCTGTTGGCTGAAGCTTGGGACACGGAGGTAAGGG-T-TTCCGCTGGCCTGAGGCGCCTCTCACTCCTCAAGTCAGCAGATCCATCTTTTTGATGCTATACTGTAAATTTATTTCACCTCGGAGAGTAAACAGATATATTGGCGCCCCAAGGGTTCATGGGTAGCGTATTTACAAAGGAGCCTCCTCCGCCAGCCGGTGCCACTGCCGCTAATGAGAGCGGTCATTAAGTAAATGAGACGTCGCC-TGAGCTGGCTTAGGAGTTCGCACACGGAGGGGAGAAGATATTTAATTGAAACCCGCACACAGTCGTCCCCACATGTGACCGCAGCACGGGAGGCAGCTGC-----------TCCCCC-AGTCCACCCCTCA-CCCCCCATGTAAATTTCATGATTGCTTTTCCGTGATGTCATTTTGAAAGAGGACAGACAATAGCTGTGGGGAAAGGTAAGTCAATATTATGTTCTTTCGCTGACAAAGGCAGATACCCAGTGCTTGGCTCTTCACCTTGGAC-GAGGCAGGGCGAGGGTGTGAGAGCAGAGCTAAT-TCTAAGAGGAAGGCTTTCTTTGCAGGAAGAGCAGGTCTGGGG-TGGGTTTTAGAAGCTGCTTGGGGGGTCTGAGGGCTC--TCTTCTCCCGGGGATG------------ i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=338856.000000 s hg38.chr20_KI270870v1_alt 73537 31 + 183433 TTTTTCTCCTGTCTCTCTG------------TTGT-TCATGCTC s panTro5.chr20 127874 31 - 66533130 TTTTTCTCCTGTCTCTCTG------------TTGT-TCGTGCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62078678 31 + 62195757 TTTTTCTCCTGTCTCTCTG------------TTGT-TCGTGCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 463890 31 - 578057 TTTTTCTCCTGTCTCTCTG------------TTGT-TCATGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109992689 31 - 110113093 TTTTTCTCCTGTCTCTCTG------------TTGT-TCATGCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92719179 31 - 92844088 TTTTTCTCCTGCCTCTCTG------------TTGT-TCATGCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96387167 31 + 96509753 TTTTTCTCCTGCCTCTCTG------------TTGT-TCATGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16857391 31 - 16982598 TTTTTCTCCTGCCTCTCTG------------TTGT-TCATGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3659671 31 - 3785965 TTTTTCTCCTGCCTCTCTG------------TTGT-TCATGCTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 44783 31 - 179258 TTTTTCTCCTGCCTCTCTG------------TTGT-TCATGCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5530678 31 - 5823884 TTTTTCTCCTGCCTCTCTG------------TTGT-TCCTGCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 12860 31 + 372756 TTTTCCTCTGGTCTCTCTG------------TTGT-TCCTGCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16251200 31 + 16356641 TTTTCCTCTGGTCTCTCTG------------TTGT-TCCTGCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1119572 31 + 1231380 TTTTCCTCTGGTCTCTCTG------------TTGT-TCCTGCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2648836 31 + 11732439 TTTTCCTCTGGTCTCTCTG------------TTGT-TCCTGCTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1827715 32 - 2029793 CTTCCGTCCTGTTCCTCCG------------TCGCTCTGCGCCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22810509 30 + 22939663 TTCCCTTCCTGTTTC-CCG------------TTGC-CTGAGCTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181767537 29 + 182113224 --TTCCTCCTCTTTCTCTG------------CCCT-TCCTGCAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47578693 43 + 47698779 TTTTCCTTCTCTTTTTCTGTCCCTCCCCGGCTTGT-TCACGCGC i canFam3.chr24 C 0 I 7 s dasNov3.JH569290 216031 42 - 397369 TTTTCCTCCTCTTTCCCTG-CCCCTCCCTGCTTGC-TCGCGTTC i dasNov3.JH569290 C 0 I 7 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56833618 28 + 57149010 I a score=2463415.000000 s hg38.chr20_KI270870v1_alt 73568 198 + 183433 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTAGGGGAAGGGG--AGCGC-ATATCAAAACCAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGATATGTCTGTGGCCGTGGGACCCAGCAGCCCCGTACCTGGGGAGAGCACTGGCCGCTTAAGCAGAAGACCTCTCTGAAGCAGGG-TCT s panTro5.chr20 127905 198 - 66533130 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTAGGGGAAGGGG--AGCGC-ATATCAAAACCAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGATATGTCTGTGGCCGTGGGACCCAGCAGCCCCGTACCTGGGGAGAGCACTGGCCGCTTAAGCAGAAGACCTCTCTGAAGCAGGG-TCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62078709 198 + 62195757 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTAGGGGAAGGGG--AGCGC-ATATCAAAACCAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGATATGTCTGTGGCCGTGGGACCCAGCAGCCCCGTACCTGGGGAGAGCACTGGCCGCTTAAGCAGAAGACCTCTCTGAAGCAGGG-TCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 463921 196 - 578057 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTG--AGAGGAGACA-TTAGGGGAAGGGG--AGCGC-ATATCAAAACCAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGAGATGTCTGTGGCCGTGGGACCCAGCAGCTCCGTACCTGGGGAGAGCACTGGCCGCTTAAGCAGAAGACCTCTCTGAAGCAGGG-TCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109992720 195 - 110113093 CTCTGAGATTCCAGGGGGCATGTTGTGCTTCTGACAGAGGAGACA-TTAGGGG-AGGGG--AGCGC-ATATCAAAACGAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGATATGTCTGTGGCC-TGGGACCCAGCAGCTCCATACCTGGCGAGAGCGCTGGCCGTTTAAGCAGAAGACCTCTCTGAAGCA-GG-TCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92719210 182 - 92844088 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTAGGGGAGGGGG--AGTGC-ATATCAAAACAAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGATATGTCTGTGGCCGTGGGACCCAGCGGCTCCGTACCTGGGGAGGGCACT----------------GACCCCTCTGAAGCGGGG-TCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96387198 182 + 96509753 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTAGGGGAGGGGG--AGTGC-ATATCAAAACAAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGATATGTCTGTGGCCGTGGGACCCAGCGGCTCCGTACCTGGGGAGGGCACT----------------GACCCCTCTGAAGCGGGG-TCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16857422 182 - 16982598 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTAGGGGAGGGGG--AGTGC-ATATCAAAACAAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGATATGTCTGTGGCCGTGGGACCCAGCGGCTCCGTACCTGGGGAGGGCACT----------------GACCCCTCTGAAGCGGGG-TCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3659702 182 - 3785965 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTAGGGGAGGGGG--AGTGC-ATATCAAAACAAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGACATGTCTGTGGCCGTGGGACCCAGCGGCTCCGTACCTGGGGAGGGCACT----------------GACCCCTCTGAAGCGGGG-TCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 44814 182 - 179258 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTAGGGGAGGGGG--AGTGC-ATATCAAAACAAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGATATGTCTGTGGCCGTGGGACCCAGCGGCTCCGTACCTGGGGAGGGCACT----------------GACCCCTCTGAAGCGGGG-TCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5530709 181 - 5823884 CTCTGAGATTCCA-GGGACATGTTGTGCGTCTGACAGAGGAGACA-TTAGGGGAGGGGG--AGTGC-ATATCAAAACAAGAAACTTTATGCGCATTTCTGAAAGAGGAACAACGGATATGTCTGTGGCCGTGGGACCCAGCAGCTCCATACCTGGGGAGGGCACT----------------GACCCCTCTGAAGCAGGG-TCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 12891 197 + 372756 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTCGTGG-AGGGG--AGTGC-AGCTTGAGACGAGAAACTTTATGCGCATTTCTGGAAGAGGAACAACGGATGTGTCTGTGGCCCTTGGACCCAGCAGCTCTGTACCTGGGGAAAGCACTGGCCCCGTAAACAGAAGATCTCTCTGAAGTAGGG-TCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16251231 196 + 16356641 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTCGGGG-AGGGG--AGTGC-AGATCGAGATGAGAAACTTTATGCGCATTTCTGGAAGATGAACAACGGATATGTCTGTGGCCCTGGGACCCAGCAGCTCCGTACCTGGGGAGAGCAC-GGCCCCATAGACAGAAGATCTCTCTGAAGTAGGG-TCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1119603 196 + 1231380 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTCGGGG-AGGGC--AGTGC-AGCTCGAGACGAGAAACTTTATGCGCATTTCTGGAAGAGGAACAGCGGATTTGTCTGTGGCCCTGGGACCCAGCAGCTCCCTACCTGGGGAGAGCAC-GGCCCCGTAGACAGAAGATCCCTCTGAAGTAGGG-TCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2648867 197 + 11732439 CTCTGAGATTCCAGGGGACATGTTGTGCGTCTGACAGAGGAGACA-TTCGGGA-AGGGG--AGTGC-GGCTCCAGACGACAAACTTTATGCGCATTTCTGGAAGAGGAACGACGGATATGTCTGTGGCCCTGGGACCCAGCAGCTCCATACCTGGGGACGGCGCCGGCCCCGTAAACAGAAGATCTCTCTGAAGTAGGG-TCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56833646 189 + 57149010 CTCTGAGATCC--GGGGACATGTTGTGCGTCTG--AGAGGAGGCA-C--GG---GAGGG--AGGGC-GCTCCGCAGCGAGAAACTTTGTGCACATTTCTGGGAGAGGAACAGCAGACATGTCGGCAGCCGTGGGACCCGGTGGCTCCGTGCCGGGGGAGGCGGCTGGTCCCCGAAGCAGAAGCCGTCTCTGAAACAGGG-TCT i micMur3.chr18 I 28 C 0 s proCoq1.NW_012150197v1 1827747 193 - 2029793 CTCTGAGATCC-AGGGGACATGTTGTGCGTCTG--ACAGGAGACA-C--GGGGAGGGGG--AGGGC-GCATCACGCCGAGAAACTTTGTGCACAATTCTGGAAGAGGAACGCCGGACATGTCTGTAGCCGTGGGACCCAGTGGCTCCGTGCCTGGGGAGGCTGCTGGTGCCTGAAGCAGAAGCTCTCCCTGAAGCAGGG-TCT i proCoq1.NW_012150197v1 C 0 I 427 s otoGar3.GL873542 22810539 195 + 22939663 CTCTGAGATCC-AGGGGACATGTTGTGCGTCTGACAGAGGAGACA-T--GGGGTGGGGG--GGAGC-GTGTACTGACGAGAAACTTTATGTGCATTTCTGGAAGAGGAGCAGCAGATATGATTGTGGCTGCAGAACCCAGCGGCTCTGTGCCTGGGGACACTGCTGGCCCCTGACGCAGAAGCTGTCTCTGAAACAGCG-TCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181767566 194 + 182113224 TTCTGAGATTCTCATGGGCATGTTGTGTGTCTAATAGAAAAGGCA-TAAGGGGAGGAGGACACTGT-GGATCAAGACAAGAAACTTTATCTGTATTTCTGGAAAAGGAGCA-CAGATGTGCCTG--GCCATGGGACACAGAAGATCTGTGTCCAGGAAGGATGCTGACCCCATATGCA---GGTCTATCTGAAGCAGAG-ACT i mm10.chr2 C 0 C 0 s canFam3.chr24 47578743 192 + 47698779 CTCTGAGAGCCCAGTAGACAGGTAGTGCGTCTGACGGAAAAGACA-TTGGGGG-----G--ACCCT-GTACCCGGGCACGAAACTTTATGTGCATTTCTGGAAGAGGAACA-CGGACACCGCTGCGGCCGCGGGACCCCGCAGCGATGTGG-GGGGGAGGACACCGCCTCCTTAAGTGGAAGACCGCCCTGGAGCGGGGATCT i canFam3.chr24 I 7 C 0 s dasNov3.JH569290 216080 193 - 397369 CTCTGAGATTCTCGCGGACATATTCTGTGTCTGACAGAAAAGACGCTTAGTTGGGGGGG--AGCCCGGTACCAAGACAAGAAACTTTATGGGTATTTCCGGACGAGGTACAGCAGACATGTCTGC-GTCGTGGGACCCGGGGGCGGCACGTCTGGGGCGAG-GCTGACCCTGTAGGCA---GAGCTCCCCGGAGCAGGC-T-- i dasNov3.JH569290 I 7 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=884452.000000 s hg38.chr20_KI270870v1_alt 73766 73 + 183433 CAGAGTCTGGGGTGTGTCATGTGTGA---CCCCC-AC------------CCAAGGTACTGAGGAGAGGTGCTCACGTGAACGTTTTGTC s panTro5.chr20 128103 74 - 66533130 CAGAGTCTGGGGTGTGTCATGTGTGA---CCCCCCAC------------CCAAGGTACTGAGGAGAGGTGCTCACGTGAACGTTTTGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62078907 73 + 62195757 CAGAGTCTGGGGTGTGTCATGTGTGA---CCCCC-AC------------CCAAGGTACTGAGGAGAGGTGCTCACGTGAACGTTTTGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 464117 73 - 578057 CAGAGTCTGGGGTGTGTCATGTGTGA---CCCCC-AC------------CCAAGGTACTGAGTAGAGGCGCTCACGTGAACGTTTTGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109992915 73 - 110113093 CAGAGTCCGGGGTGTGTCACGTGTGA---CCCCC-AC------------CCGAGGTACTGAGTAGAGGTGCTCACGCGAACGTTTTGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92719392 73 - 92844088 CAGAGTCTGGGGTGTGTCACGTGTGA---CCCCT-AC------------CCAAGGTACTGAGTAGAGGGGCTCACGTGAACGTTTTGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96387380 73 + 96509753 CAGAGTCTGGGGTGTGTCACGTGTGA---CCCCT-AC------------CCAAGGTACTGAGTAGAGGGGCTCACGTGAACGTTTTGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16857604 73 - 16982598 CAGAGTCTGGGGTGTGTCACGTGTGA---CCCCT-AC------------CCAAGGTACTGAGTAGAGGGGCTCACGTGAACGTTTTGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3659884 73 - 3785965 CAGAGTCTGGGGTGTGTCACGTGTGA---CCCCT-AC------------CCAAGGTACTGAGTAGAGGGGCTCACGTGAACGTTTTGTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 44996 73 - 179258 CAGAGTCTGGGGTGTGTCACGTGTGA---CCCCT-AC------------CCAAGGTACTGAGTAGAGGGGCTCACGTGAACGTTTTGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5530890 73 - 5823884 CAGAGTCTGGGGCGTGTCACGTGTGA---CCCCC-AC------------CCAAGGTACTGAGTAGAGGGGCTCACGTGAACGTTTTGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 13088 74 + 372756 CAGAGTCTGGGGCATGTCATGTGTGA--CCCCCC-AC------------CCAAGGTACTGAGTAGAGGTGCTCACGTGAGCATTTTGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16251427 76 + 16356641 CAGAGTCTGGGGTGTGTCATGTGTGACCCCCCCC-AC------------CCAAGGTACTGAGTAGAGGTGCTCACATGAGCGTTTTGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1119799 75 + 1231380 CAGAGTCTGGGGTGTGTCATGTGTGA-CCCCCCC-AC------------CCAAGGTACTGAGTAGAGGTGCTCACGTGAGCGTTTTGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649064 75 + 11732439 CAGAGTCTGGGGTGTGTCATGTGTGA-CCCCCCC-AC------------CCAAGGTGCCGAGTGGAGGTGCTCACGTGAGTGTTTTGTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56833835 73 + 57149010 CAGAGTCTGGGGTGTCTCGCGTGTGA---CCCGT-GC------------GCAAGGTACCAAGTGGAGATGCTCACGTGAGCGTTTTGTC i micMur3.chr18 C 0 I 124 s otoGar3.GL873542 22810734 71 + 22939663 CAGAGTC-GGGGTGTCTCAAGTGTGA---CCTGC-AC------------CCAAGGTACCAAGTAGGAATGCTCATGTGAGCA-TTTGTC i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181767760 72 + 182113224 TGGAG-CTTGGCTGTTTCTTGTGGGA---CACAC-AC------------TCCAGGTACCCAGAAGAGATGATCCTGGGAGCATTTTGTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47578935 70 + 47698779 CAGAGTC---GGTGCCGCGCGTGAGC---CCCCC-GT------------CCAAGACACGGAGGAGAGATGGTCATGTGAGCATTTTGTC i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 216273 85 - 397369 TAGGACTTGCGGTTTGTCTC-TGGAATTTCTCCT-GCGGCAGCTGGACACCCAGGTACCGGCTGGA-ATGCTCACATG-GCATTCTGCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1827940 427 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=1222081.000000 s hg38.chr20_KI270870v1_alt 73839 116 + 183433 --TGCATGTCATGCATTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCGTCTGTGGGATAGATGTGCAGAAGTAAATATCGGCCGCTCC---TCTCAGCCCCTTTTTTCGCTACGTGT s panTro5.chr20 128177 116 - 66533130 --TGCATGTCATGCATTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCGTCTGTGGGATAGATGTGCAGAAGTAAATATCGGCCGCTCC---TCTCAGCCCCTTTTTTCGCTACGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62078980 116 + 62195757 --TGCATGTCATGCATTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCGTCTGTGGGATAGATGTGCAGAAGTAAATATCGGCCGCTCC---TCTCAGCCCCTTTTTTCGCTACGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 464190 116 - 578057 --TGCATGTCATGCATTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCGTCTGTGGGATAGATGTGCAGAAGTAAATATCGGCCGCTCC---TCTCAGCCCCTTTTTTCGCTACGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109992988 116 - 110113093 --TGCATGTCACGCGTTTCTCAACTTAAGGATCAATACCTAGGGTGCATGCGTCTGTGGGATAGATGTGCAGAAGTAAATATCGGCTGCTCC---TCTCAGCCCCTTTTTTTGCTACGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92719465 114 - 92844088 --TGCATGTCACGCATTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCGTTTGTGGGACAGACGTGCAGAAGTAAACATCGGCCGCT-----TCTCAGCCCCTTTTCTCGCTGCGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96387453 114 + 96509753 --TGCATGTCACGCATTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCGTTTGTGGGACAGACGTGCAGAAGTAAATATCGGCCGCT-----TCTCAGCCCCTTTTCTCGCTGCGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16857677 114 - 16982598 --TGCATGTCACGCATTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCATTTGTGGGACAGACGTGCAGAAGTAAATATCGGCCGCT-----TCTCAGCCCCTTTTCTCGCTGCGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3659957 114 - 3785965 --TGCATGTCACGCGTTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCGTTTGTGGGACAGACGTGCAGAAGTAAATATCGGCCGCT-----TCTCAGCCCCTTTTCTCGCTGCGTGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45069 114 - 179258 --TGCATGTCACGCATTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCGTTTGTGGGACAGACGTGCAGAAGTAAATATCGGCCGCT-----TCTCAGCCCCTTTTCTCGCTGCGTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5530963 114 - 5823884 --TGCATGTCACGCATTTCTCAACTTAAGGATCAATATCTAGGGTGCATGCGTTTGTGGGGCAGACGTGCAGAAGTAAATATCGGCCGCT-----TCTCAGCCCCTTTTCTCGCTGCGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 13162 115 + 372756 --TGCATGTCATGTGTTTCTAAACTTGAGGATCAATATTGAGGGTGCATGTGTCTGT-GGATAGATGTACAGAAGTAAATATCGGCCGCTCC---TCTCAGCCCCTTTTCTCCTTACGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16251503 115 + 16356641 --TGCATGTCATGCATTTCTAAACTTGAGGGTCAATATTGAGGGTGCATGTGTCTGT-GGACAGATGTACAGAAGTAAATACTGGCCGCTCC---TCTCAGCCCCTTTTCTCGTTACTTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1119874 115 + 1231380 --TGCATGTCATGCGTTTCTAAACTTGAGGATCAATATCGAGGGTGCATGTGTCTGT-GGACAGATGTACAGAAGTAAATACCGGCCGCTCC---TCTCAGCCCCTTTTCTCGTTACGTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649139 115 + 11732439 --TGCATGCCGTGCGTTTCTAAACTTGAGGATCAACATCGAGGGTGCGTGTGTCTGT-GGACAGGTGCACAGAAACAAACGTCGGCCGCTCC---TCTCAGCCCCTTTTCTCGTCACGCGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22810807 105 + 22939663 --TGCGTGTCATGTTTTTTTAAACTTAAGTATTGACATCTATGGTGTGTGTGTCAGGGAGACGGATGTGCAGAA-----------CTTCCCT---TCTCAGCTCCTTTTTTCCTTATGTGG i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181767832 108 + 182113224 --TTCTTGTCACATACTTTCAAACTTCAGGAGCAACACCCAGGGAGCATGTGTCTGTGGGA------TCCAGGGGT-AGCATTTGCTGTTACTGTTCTCAGTTCCTCCTGT----GTGTGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47579007 114 + 47698779 --TGCGTGGCACGTATTTCTAAACTTAAGGAGCAGCATTTAGGGTGCATGTGTCTGTGGGATAGGCGCGCAGAACTAGACGCCGGCTGCCGC---TCTCAGCTGCTTTTCCTGCTGTGA-- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 216358 105 - 397369 TCGGCGTGCCCCCGATTTCCAAACTTAGGGAGCACCGCCTAGGGT-------------GGAAAGATGTGCAGAACTAGATAGTGGCCATTTC---TCTCAGTTTCTTTGCTCATTATGTGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1827940 427 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56833908 124 + 57149010 I a score=2401292.000000 s hg38.chr20_KI270870v1_alt 73955 223 + 183433 CCGTGCAGCTGTGGAGTGTGGTTGTTTATGGTGGTAGTGTAACTGGATTTTTGTATTTAAAACTAAAAATCAGGGTTAGCTAAGAA------------GTTG-AACACCCTAATGCCATTGTCTGTA---------GTTCTGGGGCCGTGGACTTTGGTTCTGTCTATTGAATTCACTTTCTTCTCTATAAACCAGGAAAATAAA------------------------------------------------CAAGTGC-TGGTGGC---TTTGTGTTGGAGTG--GTGGGTTCTCAC s panTro5.chr20 128293 223 - 66533130 CCGTGCAGCTGTGGAGTGTGGTTGTTTATGGTGGTAGTGTAACTGGATTTTTGTATTTAAAACTAAAAATCAGGGTTAGCTAAGAA------------GTTG-AACACCCTAATGCCATTGTCTGTA---------GTTCTGGGGCCGTGGACTTTGGTTCTGTCTATTGAATTCACTTTCTTCTCTATAAACCAGGAAAATAAA------------------------------------------------CAAGTGC-TGGTGGC---TTTGTGTTGGAGTG--GTGGGTTCTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079096 223 + 62195757 CCGTGCAGCTGTGGAGTGTGGTTGTTTATGGTGGTAGTGTAACTGGATTTTTGTATTTAAAACTAAAAATCAGGGTTAGCTAAGAA------------GTTG-AACACCCTAATGCCATTGTCTGTA---------GTTCTGGGGCCGTGGACTTTGGTTCTGTCTATTGAATTCACTTTCTTCTCTATAAACCAGGAAAATAAA------------------------------------------------CAAGTGC-TGGTGGC---TTTGTGTTGGAGTG--GTGGGTTCTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 464306 223 - 578057 CCGTGCAGCTGTGGAGTGTGGTTGTTTATGGTGGTAGTGTAACTGGATTTTTGTATTTAAAACTAAAAATCAGGGTTAGCTAAGAA------------GTTG-AACACCCTAATGCCATTGTCTGTA---------GTTCTGGGGCCGTGGACTTCGGTTCTGTCTATTGAATTCACTTTCTTCTCTATAAACCAGGAAAATAAA------------------------------------------------CAAGGGC-TGGTTGC---TTTGTGTTGGAGTG--GTGGGTTCTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993104 216 - 110113093 CCGTGCGGCTGTGGAGTG----TGTTTATGGTGGTAGTGTAACTGGATTTTTGTATTTAAAACTAAAAATCAGGATTAGCT---AA------------GTTG-AACACCCTAATGCCATTGTCTGTA---------GTTCCGGGGCCGTGGACTTTGGTTCTGTCCATTGAATTCACTTTCTTCTCTGTAAGCCAGGAAAATAAA------------------------------------------------CAAGTGC-TGGTGGC---TTTGTGTTGCAGTG--GTGGGTTCTCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92719579 223 - 92844088 CCGTGAGGCTGTGGAGTGTGGTTGGCTATGGTGGTAGTGTAACTGGATTTTTGTATTTAAAACTAAAAATCAGGGTTAGCTAAGAAGTTGGTTTAGGCGTTG-AGCACCTTAATGCCATTGTCTGTA---------GTTTTGGGGCCGTGGACTTTGGTTCTGTCCATCGAATTCAC------------AAACCAGGAAAATAAA------------------------------------------------CAAATGC-TGGTGGC---TTTGTGCTGGAGCG--GTGGGCTCTCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96387567 223 + 96509753 CCGTGAGGCTGTGGAGTGTGGTTGGCTATGGTGGTAGTGTAACTGGATTTTTGTATTTAAAACTAAAAATCAGGGTTAGCTAAGAAGTTGGTTTAGGCGTTG-AGCACCTTAATGCCATTGTCTGTA---------GTTTTGGGGCCGTGGACTTTGGTTCTGTCCATCGAATTCAC------------AAACCAGGAAAATAAA------------------------------------------------CAAATGC-TGGTGGC---TTTGTGCTGGAGCG--GTGGGCTCTCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16857791 223 - 16982598 CCGTGAGGCTGTGGAGTGTGGTTGGCTATGGTGGTAGTGTAACTGGGTTTTTGTATTTAAAACTAAAAATCAGGGTTAGCTAAGAAGTTGGTTTAGGCGTTG-AGCACCTTAATGCCATTGTCTGTA---------GTTTTGGGGCCGTGGACTTTGGTTCTGTCCATCGAATTCAC------------AAACCAGGAAAATAAA------------------------------------------------CAAATGC-TGGTGGC---TTTGTGCTGGAGCG--GTGGGCTCTCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660071 223 - 3785965 CCGTGAGGCTGTGGAGTGTGGTTGGCTATGGTGGTAGTGTAACTGGATTTTTGTATTTAAAACTAAAAATCAGGGTTAGCTAAGAAGTTGGTTTAGGCGTTG-AGCACCTTAATGCCATTGTCTGTA---------GTTTTGGGGCCGTGGACTTTGGTTCTGTCCATCGAATTCAC------------AAACCAGGAAAATAAA------------------------------------------------CAAATGC-TGGTGGC---TTTGTGCTGGAGTG--GTGGGCTCTCAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45183 221 - 179258 CCGTGAGGCTGTGGAGTGTGGTTGGCTATGGTGGTA--GTAACTGGATTTTTGTATTTAATACTAAAAATCAGGGTTAGCTGAGAAGTTGGTTTAGGCGTTG-AGCACCTTAATGCCATTGTCCGTA---------GTTCTGGGGCCGTGGACTTTGGTTCTGTCCATCGAATTCAC------------AAACCAGGAAAAGAAA------------------------------------------------CAAATGC-TGGTGGC---TTTGTGCTGGAGTG--GTGGGCTCTCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531077 223 - 5823884 CCGTGAGGCTGTGGAGTGTTGTTGGCTATGGTGGTAGTGTAACTGGATTTTTGTATTTAAAACTAAAAATCAGGGTTAGCTAAGAAGTTGGTTTAGGCGTTG-AACACCTTAATGCCATTGTCTGTA---------GTTTTGGGGCCGTGGACTTTGGTTCTGTCCATCGAATTCAC------------AAACCAGGAAAATAAA------------------------------------------------CAAATGC-TGGTGGC---TTTGTGCTGGAGTG--GTGGGCTCTCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 13277 235 + 372756 CCGTGGGGTTGTGGAGTGTGGTTGTGTATGGTGGTAGTGTAACTGGAATTTTATATTTAAAACTAGAAATCAGGGTTAGCTAAGAAGTTGGTGTAAGCGATG-AACACCTTCATGCCGTTGTCTGCA---------GTTCTGGGGCCGTGGACTTTGGTTCTGTCCATTGAATTCACTTTCTTCTTCACAAACCAGGAAAATAAA------------------------------------------------CAAGTGC-TGGTGGC---TTTGTGTTGGAGGG--GTGGGTTCTCAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16251618 234 + 16356641 CCGTGGGGTTGTGGAGTGTGGTTGTGTGTGGTGGTAGTGTAACTGGAATTTTATATTTAAAACTAGAAATCAGGGTTAGCTAAGAAGTCGGTGTAAGCGATG-AACACCTTCATACCATTGTCTGCA---------GTTCTGGGGCCATGGACTTTGGCTCTGTCCATTGAATTCACTTTCTTCTTCATCAACCAGGAAAATAAA-------------------------------------------------AAGTGC-TGGTGGC---TTTGTGTTGGTGGG--GTGGGTTCTCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1119989 283 + 1231380 CCGTGGGGTTGTGGAGTGTGGTTCTGTATGGTGGTAGTGTAACTGGAATTTTATATTTAAAACTAGAAATCAGGGTTAGCTAAGAAGTCGGTGTAAGCGATG-AACGCCTTCATGCCATTGTCTGCA---------GTTCTGGGGCCGTGGACTTTGGTTCTGTCCATCGAATTCACTTTCTTCTTCATCAACCAGGAAAATAAACAAGTGCTGGTGGCTTTGTGTTGGAGGGGTGGGTTCTCACTAAATAAACAAGTGC-TGGTGGC---TTTGTGTTGGAGGG--GTGGGTTCTCAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649254 194 + 11732439 CCGTGGGGTTGTGGAGTGTGGTTGTGTATGGCGGTAGGGTAACTGGAATTTTATATTTAAAACTAGAAATCAGGGTTAGCTAAGAAGTCGGTGTAAGTGCTG-AACACCTTCGTGCCATTGTCTGCA---------GTTCTGGGGCCGTGGACTTTGGTTCTGTTCATCGAA-----------------------------------------------------------------------------------------CGGTGGC---TTTGTGTCGGA-GG--GTGGGTTCTCAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56834032 239 + 57149010 TCGTGGGGTTGTGGAGTGTGGCCGTTTGTGGTGTTAGTGTCACTGGATTTGCATATTCAAAGCTAAAAATCAGTGTTGGCTAAGAAGCCAGTTTGAGCTTTG-AACACCTTAATGCCGTCACCCGTG---------GTTCTGGGGCTGTGGACTTTGGTTCTGCCCATCGAATTCACTTTGTTCTTTATAAACCGGGAAAATAAA------------------------------------------------CAAGCACCCAGTGGCTTTTGTGTTTTGGTGTG--GAGGGTCCTCAC i micMur3.chr18 I 124 I 4 s otoGar3.GL873542 22810912 226 + 22939663 -TCTGGGGTTGTGGAGTATGGTTGTTTATGATGTTAGTGTAATTGGATTTGCATATTTGAAGCTAAAAATCAGGCTTGGCTTAGAAATCAGTTTGAGCTTTGAAACACCTCAGTGCCATCACCCATA---------GTTGTAGAGCCATGGACTTTGCTTCTGCCCATTGAATTCACTTTCTTCTTTATAAACCAGGAAAATAAG------------------------------------------------TG------TAGTGGC-------TTTTGGTGTG--GTGGGTTCTCAC i otoGar3.GL873542 C 0 I 4 s mm10.chr2 181767940 216 + 182113224 TTGTGTAGTTGGGATGTGCAGTTGTTTGTAGTGCCAGTGTAACTGGGTTTTCATGTTTAAAACTAG-----------------GAAGTCAGTTTGAGCTTTG-AACACAGAGATGCCATTGCATACA----CATGTGCTCTGGAGGAG------TTGGCTCTGTTCATGAGATTTAT---ATTCTTTATGAGTCAGGATAATAAT------------------------------------------------CAAGTAT-AGGGAAG---TTTGTGTATGAGTGCTGTAGCTACTCAT i mm10.chr2 C 0 I 4 s canFam3.chr24 47579121 239 + 47698779 ---TGGGGTCAC-AAGCGTGGGGGTTTATAATATTAGTGTAACTGCGTTTGTGTATTTGAAACTAAAAATCAGG-CCGGCCGGGAACATGGCATGAGCCTTG-CACAACACAATGCCGCTGCCTGCGGGGCGATGCGTTCTGGGGCCGGGGACTTTG-TTCCGTCCTGTGGATTCACTTCCTTCTTTGTGAATCAGGA-AATAAA------------------------------------------------TAAGCCTGCGGTGGC--CCTCGCGTTGTGCTG--GTGGGTCCTCGC i canFam3.chr24 C 0 I 15 s dasNov3.JH569290 216463 216 - 397369 GCATGGGGTTGGGGAGTGGACTTGTCTATGGTGTTGGTGCAACTGGATTTTCATATTTAAAACTAAAAATCAGGGTTTGCT--GAAGCTAGTTTGGGCTTTG-AACAACCTAATG---TTGTCTGCAGGGCAAC--GTGCTGGGGGCCTGGACG------CTGTGCTCCAGATTCCC-------TCCGTGAACCAGGACAGCAAA------------------------------------------------CAGGCGC-AGCCACG---CCTGTTCT----CA--GTGTGTTC---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1827940 427 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=1187075.000000 s hg38.chr20_KI270870v1_alt 74178 90 + 183433 TGCTCCTCCTGAGTCACCAAGGGCTTTGCTTGTCTCAGCATCACCTTTGAATCAGTGGACACCATTGGCTGGTAAAGTTGGGTGTTTAAT s panTro5.chr20 128516 90 - 66533130 TGCTCCTCCTGAGTCACCAAGGGCTTTGCTTGTCTCAGCATCACCTTTGAATCAGTGGACACCATTGGCTGGTAAAGTTGGGTGTTTAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079319 90 + 62195757 TGCTCCTCCTGAGTCACCAAGGGCTTTGCTTGTCTCAGCATCACCTTTGAATCAGTGGACACCATTGGCTGGTAAAGTTGGGTGTTTAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 464529 90 - 578057 TGCTCCTCCTGAGTCACCAAGGGCTTTGCTTGTCTCAGCATCACCTTTGAACCAGTGGACACCATTGGCTGGTAAAGTTGGGTGTTTAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993320 90 - 110113093 TGCTCCTTCTGAGTCACCAAGGGCTTTGCTTGTCTCAGCATCACCTTTGAATCAGTGGACACCATTGGCTGGTAAAGTTGGGTGTTTAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92719802 89 - 92844088 TGCTCCT-CTGAGTCACCAGGGGCTTTGCTTGTCTCAGCATCACCTTTGAATCAGTGGACATCATTGGCTGGTAAAGTTGGGTGTTTAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96387790 89 + 96509753 TGCTCCT-CTGAGTCACCAGGGGCTTTGCTTGTCTCAGCATCACCTTTGAATCAGTGGACATCATTGGCTGGTAAAGTTGGGTGTTTAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858014 89 - 16982598 TGCTCCT-CTGAGTCACCAGGGGCTTTGCTTGTCTCAGCATCACCTTTGAATCAGTGGACATCATTGGCTGGTAAAGTTGGGTGTTTAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660294 89 - 3785965 TGCTCCT-CTGAGTCACCAGGGGCTTTGCTTGTCTCAGCATCACCTTTGAATCAGTGGACATCATTGGCTGGTAAAGTTGGGTGTTTAAT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45404 89 - 179258 TGCTCCT-CTGAGTGACCAGCGGCTTTGCTTGTCTCAGCATCACCTTTGAATCAGTGGACATCATTGGCTGGTAAAGTTGGGTGTTTAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531300 89 - 5823884 TGCTCCT-CTGAGTCACCAGGGGCTTTGCTTGTCTCAGCATCACCTTTGAGTCAGTGGCCATCATTGGCTGGTAAAGTTGGGTGTTTAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 13512 89 + 372756 TGCTCCTTCTGAACCACCCAGGGCTTTTCTTGTCTCAGCAGCACCTTTGAATCAATGGACACCATTGGCTGGTAAAGTTGGTT-TTTAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16251852 89 + 16356641 TGCTGCTTCTGAGCCACCCAGGGCTTTTCTTGTCTCAGCAGCACCTTTGAATCAGTGGACACCATTGGCTGGTAAAGTTGGTT-TTTAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120272 89 + 1231380 TGCTCCTTCTGAGCCACCCAGGGCTTTTCTCGTCTCAGCAGCACCTTTGAATCAGTGGACACCATTGGCTGGTAAAGTTGGTT-TTTAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649448 89 + 11732439 TGCTCCTTCTGGGCCACCCAGGGCTTTTCTTGTCTCAGCAGCACCTTTGAATCAGTGGACACCATCGGCTGGTAAAGTTGGCT-TTTAAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56834275 81 + 57149010 TGCTCTTTCTGAGTCACCAAGAGCTTTTCTTGTCTCAGCATCACCTTTGA---------CATCATTGGCTGGTAAAGTTGGGTGTGTAAT i micMur3.chr18 I 4 C 0 s proCoq1.NW_012150197v1 1828367 81 - 2029793 TGCTCTTTCTGAGTCACCGAGAGCTTTTCTTGTCTCAGCATCACCTTTGA---------CATCATCGGCTGGTAAAGTTGGGTGTTTAAT i proCoq1.NW_012150197v1 I 427 I 262 s otoGar3.GL873542 22811142 79 + 22939663 TGCTCTT--TGAACCACCAGGAGCTTTCCTTGTCTCAGCATCACCCTTGA---------CACCATTGGCTGTTGAAGTTGGGTGTTTAAT i otoGar3.GL873542 I 4 C 0 s mm10.chr2 181768160 87 + 182113224 TGCTCCT-TTCAGACAT--GGATGCTTTCTTGTTTCAATATAATCTTTGAATCAGTGGATATCATTGGCTGGTAAAGTTGGTTGTTTAAT i mm10.chr2 I 4 C 0 s canFam3.chr24 47579375 89 + 47698779 TACTGTCTCTGAGTCGCTGAGGGCTGCTCTGGTCTCAGGGCCAGCTTTGCGTCAGCGGACATCATT-CCCGGTCCGGCTGGGTATGTAAT i canFam3.chr24 I 15 C 0 s dasNov3.JH569290 216679 64 - 397369 --CTCGTTCTGTGTT-CCGAGGGCTTTTCTTGTCTC------ACCTTTGA---------CGCC--------GTAGAGTTGGGCATTTAAT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=1388125.000000 s hg38.chr20_KI270870v1_alt 74268 147 + 183433 TTTGGAAACCAAACATTTGCGG--TGGTG-----CGGGGGGTTC-CGTGGCTG--CAGGTGGGTTTGGTCCT--GGGCATGGACTCTGTCACGAT---GATGATAATGGC-AG---CGATGATTATAATTATCCTTTTGGGAGAGGTCGGTGGAGAATTTTGCCCT s panTro5.chr20 128606 147 - 66533130 TTTGGAAACAAAACATTTGCGG--TGGTG-----CGGGGGGTTC-CGTGGCTG--CAGGTGGGTTTGGTCCT--GGGCATGGACTCTGTCACGAT---GATGATAATGGC-AG---CGATTATTATAATTATCCTTTTGGGAGAGATCGGTGGAGAATTTTGCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079409 147 + 62195757 TTTGGAAACAAAACATTTGCGG--TGGTG-----CGGGGGGTTC-CGTGGCTG--CAGGTGGGTTTGGTCCT--GGGCATGGACTCTGTCACGAT---GATGATAATGGC-AG---CGATTATTATAATTATCCTTTTGGGAGAGGTCGGTGGAGAATTTTGCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 464619 147 - 578057 TTTGGAAACAAAACATTTGCGG--TGGTG-----CGGGGGGTTC-TGTGGCTG--CAGGTGGGTTTGGTCCT--GGGCATGGACTCTGTCACGAT---GATGATAATGGC-AG---CGATGATTATAATTATCCTTTTGGGAGAGGTCGGTGGAGAATTTTGCCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993410 147 - 110113093 TTTGGAAACAAAACATTTGTGG--TGGTG-----CGGGGGGTTC-TGTGGCTG--CAGGTGGGTTTGGTCCC--GGGCAGCGACTCTGTCACGAT---GATGATAATGGC-AG---CGCTGATTATAATTATCCTTTTGGGAGAGGGCGGTGGAGAATTTTGCCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92719891 137 - 92844088 TTTGGAAACAAAACATCTGCGG--TGGTG-----CGGGGGGTTC-TGTGGCTG--CAGGCGGGTTGGGTC---------------CTGTCACGATAACGATGGTAATGAC-AG---CGGTGATTATAATTATCCTTTTGGGAGAGGGAGGTGGAGAATTTTGCCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96387879 137 + 96509753 TTTGGAAACAAAACATCTGCGG--TGGTG-----CGGGGGGTTC-TGTGGCTG--CAGGCGGGTTGGGTC---------------CTGTCACGATAACGATGGTAATGAC-AG---CGGTGATTATAATTATCCTTTTGGGAGAGGGAGGTGGAGAATTTTGCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858103 137 - 16982598 TTTGGAAACAAAACATCTGCGG--TGGTG-----CGGGGGGTTC-TGTGGCTG--CAGGCGGGTTGGGTC---------------CTGTCACGATAACGATGGTAATGAC-AG---CGGTGATTATAATTATCCTTTTGGGAGAGGGAGGTGGAGAATTTTGCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660383 137 - 3785965 TTTGGAAACAAAACATCTGTGG--TGGTG-----CGGGGGGTTC-TGTGGCTG--CAGGTGGGTGGGGTC---------------CTGTCACGATAACGATGGTAATGAC-AG---CGGTGATTATAATTATCCTTTTGGGAGAGGGAGGTGGAGAATTTTGCCCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45493 137 - 179258 TTTGGAAACAAAACATCTGCGG--TGGTG-----CGGGGCGTTC-TGTGGCTG--CAGGCGGGTTGGGTC---------------CTGTCACGATAACGATGGTAATGAC-AG---CGGTGATGATAATTATCCTTTTGGGAGAGGGAGGTGGAGAATTTTGCCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531389 136 - 5823884 TTTGGAAACAAAACATCTGCGG--TGGTG-----CGGGGT-TTC-TGTGGCTG--CAGGCGGGTTGGGTC---------------CTGTCACGATAACGATGATAATGAC-AG---CGATGATTATAATTATCCTTTCGGGAGAGGGAGGTGGAGAATTTTGCCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 13601 150 + 372756 TTTGGAAACAAAACATCTGCGG--TGGCG-----GGGGGGGTTC-TGTGGCTG--CATGTGGGTTTGGTCGT--GGGCATCGACACTGTCACTATAATGATGATAATGAC-AG---CGATGATTATAATTATCCTTTTGGGAGAGGGAGGTGGAGAATTTTGCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16251941 155 + 16356641 TTTGGAAACAAAACATCTGTGG--TGGTGGTGGTGGGGGGGTTC-CGTGGCTG--CATGCGGGTTTGGTCGT--GGGCATCGACACTGTCACTATAATGATGATAATGAC-AG---CAATGATTGTAATTATCCTTTTGGGAGAGGGAGGAGGAGAATTTTGCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120361 148 + 1231380 TTTGGAAACAAAACCTCTGCGG--TGGCG-------GGGGGTTC-CGTGGCTG--CATGTGGGTTTGGTCGT--GGGCATCGTCACTGTCCCTCTAATGATGATAATGAC-AG---CGATGGTTATAATTATCCTTTTGGGAGAGGGAGGTGGAGAGTTTTGCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649537 148 + 11732439 TTTGGAAACAGAACATCTGCGG--TGGCG-------GGGGGCTC-CGTGGCTG--CATGTGGGTTTGGTCGT--GGGCATTGACACTGTCACTGTAATGATGATAATGAC-AG---CGATGATTATAATTATCCTTTTGGGAGAGGGAGGTGGAGAATTTTGCCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56834356 144 + 57149010 ------AACCCAACATCTGGGG--CAGGG-----GCGGGGGTT--GGTGGCTG--CATGTGGATTTGGTCTT-GGGGCACGGACCGTGTGACTATAAAGATGATAATCAC-AG---TGATGATTATAATTATCCTTTTGGGAGAGGAAGGTGGGGAATTTTGTCCT i micMur3.chr18 C 0 I 137 s otoGar3.GL873542 22811221 130 + 22939663 ------AGTCAAACATCTGGGG-----------------------GGTGGCAG--CATGTGGATTTGGTCTT-GGGGTGCCGACTGTGTGATTATAAAGATAATAAAAAC-AG---TGCTGATTATAATTATCCTTTTGAGAGAAGGAGGTGGGAAATTTTGCCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181768247 129 + 182113224 TTCTGAAATAAAGCTTCTAAGAAATGGCT-----TGAAGATTACATGTGTCTGGTCAGACTGTGTTAGCTGT-AAAATAGCAA-------ACAACAACAACAATAATAATAAA---CAATGACTGTGACTATT---------------------AAATTGttcttt i mm10.chr2 C 0 C 0 s canFam3.chr24 47579464 125 + 47698779 TTCTGAAACAAAACATCAGAGA---GGTG-----TG---------TCTGGCCG--T-----------GTCAC----------ACTGTGTCACTCTCACGGTGCTAATGAC-AGTGATGATGATTATTATTATCCTTTTGGGAGAGGGAAGTGAGGAATTTCGCCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 216743 138 - 397369 TCCTGGAACAAAACATCC------TGAAG-----CGGGGA-CGA-GGGAGCCG--CATGTGGGCTTGGTCTCTGAGCCTCTGGCCGTGCTTCTAG---------AATGAC-AG---TGATGATTGCAATGATCCTTTTGGGAGAGGGAGGCGAGGAATTTTGCCCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1828448 262 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=998431.000000 s hg38.chr20_KI270870v1_alt 74415 134 + 183433 TGCAG---------TTT---------TTTTTTTT-CTTTTAAA----------------------------------TC--ACAGAAA---------ACTGAGGACACCTCTAACGCCAGT-GGCTGAGTGCACAAAAGGTGGGAG--GGATGT-GG-GGCAGACCTG-----GGGGGG-----CCCACTCGGTGCTGAGGGG-TATGCTCTGC s panTro5.chr20 128753 134 - 66533130 TGCAG---------TTT---------TTTTTTT--CTTTTAAA----------------------------------TC--ACAGAAA---------ACTGAGGACACCTCTAACGCCAGT-GGCTGAGTGCACAAAAGGTGGGAG--GGATGTTGG-GGCAGACCTG-----GGGGGG-----CCCACTCGGTGCTGAGGGG-TATCCTCTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079556 134 + 62195757 TGCAG---------TTT---------TTTTTTT--CTTTTAAA----------------------------------TC--ACAGAAA---------ACTGAGGACACCTCTAACGCCAGT-GGCTGAGTGCACAAAAGGTGGGAG--GGATGTTGG-GGCAGACCTG-----GGGGGG-----CCCACTCGGTGCTGAGGGG-TATCCTCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 464766 132 - 578057 TGCAG---------TTT---------TTTTTTT--CTTTTAAA----------------------------------TC--ACAGAAA---------ACTGAGGACACCTCTAACGCCAGT-GGCTGAGTGCCCAAAAGGTGGGAG--GGATGT-GG-GGCAGACCT------GGGGGG-----CCCACTTGGTGCTGAGGGG-TGTGCTCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993557 143 - 110113093 TGTAG---------tttttgtttttgttttttt--cttttAAA----------------------------------TC--ACAGAAA---------ACCGAGGATACCTCTAATGCCAGT-GGCTGAGTGCACAAAAGGTGGGAG--GGATGTTGG-GGCAGACTTG-----GGTGGG-----CCCACTTGGTGCTGAGGGG-TGTGCTCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720028 139 - 92844088 TGTAG---------ttt----tttttttttttt--tttttAAA----------------------------------TC--ACAGAAA---------CCCGAGGACACCTCCAATGCCAGT-GGCTGAGTGCACAAAAGGTGGGAG--GGATGTTGG-GGCAGGCCTG-----GGGGGG-----CCCGCTTGGTGCTGAGGGG-TGTGCACTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388016 137 + 96509753 TGTAG-----------t----tttttttttttt--tttttAAA----------------------------------TC--ACAGAAA---------CCCGAGGACACCTCCAATGCCAGT-GGCTGAGTGCACAAAAGGTGGGAG--GGATGTTGG-GGCAGGCCTG-----GGGGGG-----CCCGCTTGGTGCTGAGGGG-TGTGCACTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858240 139 - 16982598 TGTAG---------ttt----tttttttttttt--tttttAAA----------------------------------TC--ACAGAAA---------CCTGAGGACACCTCCAATGCCAGT-GGCTGAGTGCACAAAAGGTGGGAG--GGATGTTGG-GGCAGGCCTG-----GGGGGG-----CCCGCTTGGTGCTGAGGGG-TGTGCACTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660520 140 - 3785965 TGTAG--------tttt----tttttttttttt--tttttAAA----------------------------------TC--ACAGAAC---------CCCGAGGACACCTCCAACGCCAGT-GGCTGAGTGCACAAAAGGTGGGAG--GGATGTTGG-GGCAGGCCTG-----GGGGGG-----CCCGCTTGGTGCTGAGGGG-TGTGCACTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45630 138 - 179258 TGTAG---------TTT----TGTTTTGTTTTT--TTTTTAAA----------------------------------TC--ACAGAAA---------CCCGAGGACACCTCCAACGCCAGT-GGCTGAGTGCACAAAAGGTGGGAG--GGATGTTGG-GGCAGGCCT------GGGGGG-----CCCGCTTGGTGCTGAGGGG-TGTGCACTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531525 118 - 5823884 TGTAG---------ttt----ttttgttttttt--ttttttAA----------------------------------TC--ACAGAAA---------CCCGAGGACACCTCTAACGCCAGT-GGCTGAGTGCACAAAATGTGGCAG--GGACGTTGG-GGCAGGCTT------GGGGGG-----CCCGCT---------------------TGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 13751 132 + 372756 TGTAG---------TTG---------TTTTTTT--TTTTAAAA----------------------------------TC--ACAGAAA---------CCCGAGGACACTTCTAACACCAGT-GGCTTAGTGCACAAAAGGTGGGAG--GGATGTTGG-GGCAGACTT------GGGGG------CTCACTTGGTGCTGAGGGG-TGTGCTCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252096 130 + 16356641 TGTAGtttttttttttt---------ttttttt--tttttAAA----------------------------------TC--ACAGAAA---------CCCGAGGACACTTCTAACACCAGT-GGCTTAGTGCAGAAAAGGTGGGAG--GGGTGTTGG-GGCAGAGTT------GGGGGA-----CCCACTTGGTGCTGA-------------GG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120509 134 + 1231380 TGTAG--------TTTT---------TTTTTTT--TTTTTAAA----------------------------------TC--ACAGAAA---------CCCGAGGACACTTCTAACACCAGT-GGCTAAGTGCAGAAAAGGTGGGAG--GGGTGCTGG-GGTAGACCT------GGGGGG-----CCCACTTGGTGCTGAGGGG-TGTGCTCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649685 128 + 11732439 --------------TTT---------TTTTTTT--TTTTTAAA----------------------------------TC--ACAGAAG---------CCCGAGGACACTTCTAACACCAGT-GGCTTAGTGCACAAAAGGTGGGAG--GGGTGTTGG-GGCAGACTT------GGGGGG-----CCCACTTGGTGCTGAGGGG-TGTGCTCTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22811351 115 + 22939663 ---------------------------------AGTGGTTAA---------------------------------------AAAAAAA---------TCCCAGCGCAAC-CTGAGGACAGT-GGCCTAGTGAACAAAAGGCAGAAA--GG-TGTTGG-GACAGGCCT------GGGGGC-----CCAGTATGGTGCTGAGGGG-TTCCTGCTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181768376 168 + 182113224 --------------------ttttttttttttt--tttttGAGGGGGAGAGGATGCATTTGGTTCCACTGGC-----TT--AAAAAAGAATCTTAGTCCTGAGGGTATCTTTGAGGCTAGT-GGCCAAGTGAACAAAAATAGGAAT--G--TGTTAA-GGCAAACTTA-----GGAGGGGAGCATCTAATTGGCACTAAAGGGCTGTG------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47579589 137 + 47698779 ------------------------------AGT--GGTCTAAA------------------CAACCACAACCAGACATT--ACAGAAA---------CCCGGGGACATCTCTGCGGCTCGT-GGCTGTGCGAACAAAAGGCAGGAG--GAGTGTTGG-GACAAACCTGGGCGAGGTGAG-----CCTCGGTCTTGGCGAGAGG-------CTGG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 216881 117 - 397369 --------------------------GGTGGTT--TAATGAAA----------------------------------TCCTAGAGAAA---------TCTTAGGGCACCTCTGAGGCTAGTGGGCGGAGTAAACAAAAGCAGAGCTTCAGCCGCTGGCAGCAGG---------GAGGAG-----CA--------GCTGAGGA--TGCATTTC-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1828448 262 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56834500 137 + 57149010 I a score=775040.000000 s hg38.chr20_KI270870v1_alt 74549 58 + 183433 -CTCTGTCTCCTCTGAGGTGCCAGCAGAGC---CTGTCCTGGCCTCACTCTGGCCTGGGGAG s panTro5.chr20 128887 58 - 66533130 -CTCTGTCTCCTCTGAGGTGCCGGCAGAGC---CTGTCCTGGCCTCACTCTGGCCTGGGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079690 58 + 62195757 -CTCTGTCTCCTCTGAGGTGCCGGCAGAGC---CTGTCCTGGCCTCACTCTGGCCTGGGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 464898 58 - 578057 -GTCTGTCTCCTCTGAggcgctggcagagc---ctgtcctggcctcactctggcctggGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993700 58 - 110113093 -CTCTGTCTCCTCTGAGGTGCCGGCAGAgc---ctgccctggcctcgctctggcctggGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720167 58 - 92844088 -CTCTGTCTCCTCTGAGGTGCTGGCAGAGC---CTGCCTTGGCCTCACTGTGGCCTGGGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388153 58 + 96509753 -CTCTGTCTCCTCTGAGGTGCTGGCAGAGC---CTGCCTTGGCCTCACTGTGGCCTGGGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858379 58 - 16982598 -CTCTGTCTCCTCCGAGGTGCTGGCAGAGC---CTGCCTTGGCCTCACTGTGGCCTGGGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660660 58 - 3785965 -CTCTGTCTCCTCTGAGGTGCTGGCAGAGC---CTGCCTTGGCCTCACTGTGGCCTGGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45768 58 - 179258 -CTCTGTGTCCTCTGAGGTGCTGGCAGAGC---CTGCCTTGGCCTCACTGTGGCCTGGGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531643 58 - 5823884 -CTCTGTCTCCTCTGAGGTGCTGGCAGCAC---CTGCCTTGGCCTCACTGTGGCCTGGGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 13883 58 + 372756 -CTCTGTCTCCTCTGAGGTGCTGACAGAGC---CTGCCCTGGCTGCACTCTGGCCTGGGGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252226 58 + 16356641 -CTCTGTCTCCTCCGAGGTGCTGACAGAGA---CTGCCCTGGCCTCACTCTGGCCTGGGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120643 58 + 1231380 -CTCTGTCTCCTCCGAGGTGCTGACAGAGC---CTGCCCTGGCCTCACTCTGGCCTGGGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649813 58 + 11732439 -CTCTGTCTCCTGCGAGGTGCTGACAGAGC---CTGCCCTGGCCTCACTCTGGCCTGGGGAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56834637 58 + 57149010 -CTCTGTCTCCTCGGAGGTGCCCGCGGAGT---CTGCCCTGACCTTACTCTGGCCTGGGGAG i micMur3.chr18 I 137 I 68 s proCoq1.NW_012150197v1 1828710 58 - 2029793 -CTCTGTCTCCCCAGAGGTGCCGGCAGAGT---CTGCCCCGACCTCGCTCTGGCCTGGGGAG i proCoq1.NW_012150197v1 I 262 C 0 s otoGar3.GL873542 22811466 46 + 22939663 -CTCTGTCTCCT------------TTGACT---CTGCCCTGACCTCACTGTGGCCTGGAGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181768544 53 + 182113224 ---CTAGTTTCTCTGGGGTGGCAACAGTGTGGGGTGTTGGGTCCTTA------CCTGTCAAG i mm10.chr2 C 0 I 5 s canFam3.chr24 47579727 58 + 47698779 -CCCTGCCCCTTCGATGATGCCGGCAGGGC---CTGTCCTGGCCTCACCCCAGCCCGGGGAG i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 216998 57 - 397369 GACTTTCCTCTCTGGAGGTGCCGGCCGAGC---CG--CTCGGACCTGCCCTGGCCAGGGCAG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=24884.000000 s hg38.chr20_KI270870v1_alt 74607 5 + 183433 TGGGG-- s panTro5.chr20 128945 5 - 66533130 TGGGG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079748 5 + 62195757 TGGGG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 464956 5 - 578057 TGGGG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993758 5 - 110113093 TGGGG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720225 5 - 92844088 TGGGG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388211 5 + 96509753 TGGGG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858437 5 - 16982598 TGGGG-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660718 5 - 3785965 TGGGG-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45826 5 - 179258 TGGGG-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531701 5 - 5823884 TGGGG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 13941 4 + 372756 T-GGG-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252284 4 + 16356641 T-GAG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120701 4 + 1231380 T-GGG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649871 4 + 11732439 T-GGG-- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1828768 5 - 2029793 TGGGG-- i proCoq1.NW_012150197v1 C 0 I 54 s otoGar3.GL873542 22811512 5 + 22939663 TGTGC-- i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181768602 5 + 182113224 tgtgt-- i mm10.chr2 I 5 C 0 s canFam3.chr24 47579785 4 + 47698779 -AGGG-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217055 5 - 397369 --GGGCT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56834695 68 + 57149010 I a score=790508.000000 s hg38.chr20_KI270870v1_alt 74612 77 + 183433 GTGCTGTATCCTCT-ACAGGGCTG-------ACTGAGG-GAGGCTCCCCTCGGCCCCCAGCCTCCCTGCCACCCCGGGCTCCCCTC s panTro5.chr20 128950 77 - 66533130 GTGCTGTATCCTCA-CCAGGGCTG-------ACTGAAG-GAGGCTCCCCTCGGCCCCCAGGCTCCCTGCCACCCCGGGCTCCCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079753 77 + 62195757 GTGCTGTATCCTCA-CCAGGGCTG-------ACTGAGG-GAGGCTCCCCTCGGCCCCCAGGTTCCCTGCCACCCCGGGCTCCCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 464961 77 - 578057 GTGCTGTGTCCTCA-CCAGGGCTG-------ACTGAGG-GAGGCTCCCCTCGGCCCCCAGGCTCCCTGCCACCCCGGGCTCCCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993763 77 - 110113093 GTGCTGTGTCCTCA-CCAGGGCTG-------ACTGAGG-GAGGCTCCCCTCGGCCCCCAGGCTCCCTGCCACCCCGGGCTCCCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720230 78 - 92844088 GTGCTGTGTCCTCACCCAGGGCTG-------ACTGAGG-GAGGCTCCCCTCGGCCCCCAGGCTCCCTGCCACCCAGGGCTCCCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388216 78 + 96509753 GTGCTGTGTCCTCACCCAGGGCTG-------ACTGAGG-GAGGCTCCCCTCGGCCCCCAGGCTCCCTGCCACCCAGGGCTCCCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858442 78 - 16982598 GTGCTGTGTCCTCACCCAGGGCTG-------ACTGAGG-GAGGCTCCCCTCGGCCCCCAGGCTCCCTGCCACCCAGGGCTCCCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660723 78 - 3785965 GTGCTGTGTCCTCACCCAGGGCTG-------ACTGAGG-GAGGCTCCCCTCGGCCCCCAGGCTCCCTGCCACCCAGGGCTCCCCTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45831 78 - 179258 GTGCTGTGTCCTCACCCAGGGCTG-------ACTGAGG-GAGGCTCCCCTCGGCCCCCAGGCTCCCTGCCACCCAGGGCTCCCCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531706 78 - 5823884 GTGCTGTGTCCTCACCCAGGGCTG-------ACTGAGG-GAGGCTCCCCTTGGCCCCCAGGCTCCCTGCCACCCAGGGCTCCCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 13945 78 + 372756 GTGCTGTGTCCTCACCCAGGGCTG-------ACTAAGG-GAGGCTCCCCTTGGCCCCCAGGCCGACTGCCACCCAGAGCTCCCCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252288 72 + 16356641 GTGCTGTGTCCTCACCCAGGCCTG-------ACTAAGG-GTGGCTCCCCTCGGCC------CTGCCTGCCACCTAGGGCTCCCCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120705 78 + 1231380 GTGCTGTGTCCTCACCCAGGGCTG-------ACTAAGG-GAGGCTCCCCTCGGCCCCCAGGCTGCCTGCCACCCAGGGCTCCCCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649875 78 + 11732439 GTGCTGTGTTCTCACCCAGGGCTG-------ACTAAGG-GAGGCTCCCCTCGGCCCCCGGGCTGCCTGCCACCCAGGGCTCCCCTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22811519 75 + 22939663 GTGCTGTGTTCTCACCAAGGACTG-------GC-ATGG-GAGGCTCCCCTCGGCC-CCAGGTCCCCTGCCATA-AGAACTACCCTC i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181768607 56 + 182113224 -------------------gtgtg-------tgtgtgt-gtgtCTCCCTTCAGCC-TCAGGCTCTTTGCCACTACAGCCTCTTT-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47579789 68 + 47698779 -----GTGTCCTCGCCTGGGGCTGGGCGGGCGCTGGGGAGAGGC------------CCAGGCTCCCGGCCACC-GGGGCTCCCTTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217060 69 - 397369 GTGCTGTGCCTTTACCCAGGGCTG--------CAGACA-GAGGCGCC---TGGGGCCCAGG--ACCTGCC-CTCAGGGCTCCTG-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1828773 54 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56834695 68 + 57149010 I a score=134601.000000 s hg38.chr20_KI270870v1_alt 74689 9 + 183433 CCATTGGTC- s panTro5.chr20 129027 9 - 66533130 CCATTGGTC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079830 9 + 62195757 CCATTGGTC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465038 9 - 578057 CCATTGGTC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993840 9 - 110113093 CCATTGGTC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720308 9 - 92844088 CCATTGGTC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388294 9 + 96509753 CCATTGGTC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858520 9 - 16982598 CCATTGGTC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660801 9 - 3785965 CCATTGGTC- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45909 9 - 179258 CCATTGGTC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531784 9 - 5823884 CCATTGGTC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14023 9 + 372756 CCATTGGTC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252360 9 + 16356641 CCATTGGTC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120783 9 + 1231380 CCATTGGTC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649953 9 + 11732439 CCATTGGTC- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1828827 9 - 2029793 CCACTGGTT- i proCoq1.NW_012150197v1 I 54 C 0 s otoGar3.GL873542 22811594 9 + 22939663 CCTTTGGTC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181768663 9 + 182113224 CCATTGGCC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47579857 9 + 47698779 CCATTGGTC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217129 9 - 397369 -CCCTGGCCC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56834695 68 + 57149010 I a score=949963.000000 s hg38.chr20_KI270870v1_alt 74698 60 + 183433 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACGGTAAACAAAAGAG s panTro5.chr20 129036 60 - 66533130 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACGGTAAACAAAAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079839 60 + 62195757 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACGGTAAACAAAAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465047 60 - 578057 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACAGTAAACAAAAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993849 60 - 110113093 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAATGGTAAACAAAAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720317 60 - 92844088 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACAGTAAACAAAAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388303 60 + 96509753 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACAGTAAACAAAAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858529 60 - 16982598 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACAGTAAACAAAAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660810 60 - 3785965 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACAGTAAACAAAAGAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45918 60 - 179258 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACAGTAAACAAAAGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531793 60 - 5823884 CTTGGCTGTGATTATCGCCTCCTTCCATATGGCCCTGTTAATTAACAGTAAACAAAAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14032 60 + 372756 CTTGACTGTGATTATCACCTCCTTCCATATGGCCTTGTTAATTAACGGTAAACAAAAGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252369 60 + 16356641 CTTGACTGTGATTATCACCTCCTTCCATATGGCCCTGTTAATTAACAGTAAACAAAAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120792 59 + 1231380 CTTGGCTGTGATTATCACCTCCTTCCATATGGCCCTGTTAATTAAC-GTAAACAAAAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2649962 60 + 11732439 CTTGGCTGTGATTATCACCTCCTTCCATATGGCCCTGTTAATTAACGGTAAACAAAAGAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56834763 59 + 57149010 CTTGGCTGTGATTGTCACCTCCTTCCATATGG-CCGGTTAATTGATGGTAAACAAAAGAG i micMur3.chr18 I 68 I 44 s proCoq1.NW_012150197v1 1828836 58 - 2029793 CTTGGCTGTGATTATCGCCTCCTTCCATATGG-CCGGTTAATTGATGGTAAACAAAGAG- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22811603 60 + 22939663 TTGGGCTGTGATTATCACCTCCATCCATATGGTCCTATTAATTAGTGGTAAACAAAAGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181768672 57 + 182113224 CTTGGCTGTAATTTTTACCTCAGTCCATATGGCTGTGTTAACTAAC---AAATAAAAGAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47579866 58 + 47698779 -CTGGCTGTGATTATCACCTCCTTCCATATGGCCCT-TTAATTAATGGTAAACAAAAGAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217138 56 - 397369 CCTAGACGGG----TCCTCTCCTTCCATGTGGCCCAGCTCACTAATGGTAAACGAAAGGG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=269212.000000 s hg38.chr20_KI270870v1_alt 74758 22 + 183433 TAAGAGAGCAGGGATTGGAGTC s panTro5.chr20 129096 22 - 66533130 TAAGAGAGCAGGGATTGGAGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079899 22 + 62195757 TAAGAGAGCAGGGATTGGAGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465107 22 - 578057 TAAGAGAGCAGGGATTGGAATC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993909 22 - 110113093 TAAGAGAGCAGGGATTGGAGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720377 22 - 92844088 TACGAGAGCAGGGATTGGAGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388363 22 + 96509753 TACGAGAGCAGGGATTGGAGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858589 22 - 16982598 TACGAGAGCAGGGATTGGAGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660870 22 - 3785965 TACGAGAGCAGGGATTGGAGTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 45978 22 - 179258 TACGAGAGCAGGGATTGGAGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531853 22 - 5823884 TAAGAGAACAGGGATTGGAGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14092 22 + 372756 TAAGAGAGCAGGGATTGGGGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252429 22 + 16356641 TAAGAGAGCAGGGATTGGGGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120851 22 + 1231380 TAAGAGAGCAGGGATTGGGGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650022 22 + 11732439 TAAGAGAGCAGGGATTGGGGTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1828894 22 - 2029793 TGGGAGAGCAGGGACCGGAGTC i proCoq1.NW_012150197v1 C 0 I 31 s otoGar3.GL873542 22811663 22 + 22939663 TGGGAGAGCAGGGATTGGAGtc i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181768729 16 + 182113224 -TGGAAAACAAAGATTA----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47579924 21 + 47698779 TGGGAGAGCGGAGATTGGAGT- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217194 13 - 397369 -CGGAGAGCAGGCA-------- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56834822 44 + 57149010 I a score=10909.000000 s hg38.chr20_KI270870v1_alt 74780 2 + 183433 CT s panTro5.chr20 129118 2 - 66533130 CT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079921 2 + 62195757 CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465129 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993931 2 - 110113093 CT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720399 2 - 92844088 CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388385 2 + 96509753 CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858611 2 - 16982598 CT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660892 2 - 3785965 CT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46000 2 - 179258 CT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531875 2 - 5823884 CT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14114 2 + 372756 CA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252451 2 + 16356641 CA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120873 2 + 1231380 CA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650044 2 + 11732439 CA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22811685 2 + 22939663 tt i otoGar3.GL873542 C 0 I 262 s canFam3.chr24 47579945 2 + 47698779 TT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1828916 31 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181768745 0 + 182113224 C e micMur3.chr18 56834822 44 + 57149010 I e dasNov3.JH569290 217207 0 - 397369 C a score=315346.000000 s hg38.chr20_KI270870v1_alt 74782 46 + 183433 GTGGTACCAGCCAGGGTGCTG-------------------------CTATCA--GTAGAGGCAG---GACCCTGCC s panTro5.chr20 129120 46 - 66533130 GTGGTACCAGCCAGGGTGCTG-------------------------CTACCA--GTAGAGGCAG---GACCCTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079923 46 + 62195757 GTGGTACCAGCCAGGGTGCTG-------------------------CTACCA--GTAGAGGCAG---GACCCTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465131 46 - 578057 GTGGTACCAGCCAGGGTGCTG-------------------------CTACCA--GTAGAGGCAG---GACCCTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993933 46 - 110113093 GTGGTACCAGCCAGGGTGCTG-------------------------CTACCA--GTGGAGGCAG---GACCCTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720401 46 - 92844088 GTGGTACCAGCCTGGGTGCTG-------------------------CTACCA--GTGGGGGCAG---GACCCTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388387 46 + 96509753 GTGGTACCAGCCTGGGTGCTG-------------------------CTACCA--GTGGGGGCAG---GACCCTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858613 46 - 16982598 GTGGTACCAGCCTGGGTGCTG-------------------------CTACCA--GTGGGGGCAG---GACCCTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660894 46 - 3785965 GTGGTACTAGCCCGGGTGCTG-------------------------CTACCA--GTGGGGGCAG---GACCCTGCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46002 46 - 179258 GTGGTACCAGCCCGGGTGCTG-------------------------CTACCA--GTGGGGGCAG---GACCCTGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531877 46 - 5823884 GTGGCACCAGCCAGGGTGCTG-------------------------CTACCA--GTGGGGGCAG---GACCCTGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14116 31 + 372756 GTGGTACCAGCCAGGGCGCTG-------------------------CT--------------------ACCCTGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252453 31 + 16356641 GCGGTACCAGCCAGGGCGCTG-------------------------CA--------------------ACCCTGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120875 31 + 1231380 GCGGTACCAGCCAGGGCACTG-------------------------CT--------------------ACCCTACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650046 31 + 11732439 GCGGTACCAGCCAGGGCGCTG-------------------------CT--------------------ACACTGCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22811949 73 + 22939663 atggtcccagccAAGGGATTGGAATCTTGCAGTGGCTGGCTAGGCACTGCCACTGTAGAGGCAG---GCCCCTGCC i otoGar3.GL873542 I 262 C 0 s mm10.chr2 181768745 44 + 182113224 --TGTACCCAGTAGTATGCTG-------------------------TTGTCA--ACTGAGGCAT---GGCCCTACC i mm10.chr2 C 0 C 0 s canFam3.chr24 47579947 43 + 47698779 GTGGTGCCAGCGGGGAGGGTG-------------------------TCACCA----ACAGGCAG---GACTCAGC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217207 37 - 397369 ----------CCAGGGGGCTG---------------------------GCGA--CTGGAGGCAGACCGGCCCGGCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1828916 31 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56834822 44 + 57149010 I a score=503871.000000 s hg38.chr20_KI270870v1_alt 74828 40 + 183433 CTGTCTCCCTCGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG s panTro5.chr20 129166 40 - 66533130 CTGTCTCCCTCGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62079969 40 + 62195757 CTGTCTCCCTCGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465177 40 - 578057 CTGTCTCCCTCGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109993979 40 - 110113093 CTGTCTCCCTGGGTA-GCTGTTCCTTATACAGAGGAGGCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720447 40 - 92844088 CTGTCTCCCTGGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388433 40 + 96509753 CTGTCTCCCTGGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16858659 40 - 16982598 CTGTCTCCCTGGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3660940 40 - 3785965 CTGTCTCCCTGGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46048 40 - 179258 CTGTCTCCCTGGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531923 40 - 5823884 CTGTCTCCCTGGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14147 40 + 372756 CTGTCTCCCTGGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252484 40 + 16356641 CTGTCTCCCTGGGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120906 40 + 1231380 CTGTCTCCCTGGGTA-GCTATTCCTTGTGCAGAGGAGGCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650077 39 + 11732439 CTGTCTCCCT-GGTA-GCTGTTCCTTGTGCAGAGGAGGCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56834866 38 + 57149010 CTGTCCCCCTGGGTG-GCTGTTCCTGGCGCAGAGGAG--TG i micMur3.chr18 I 44 C 0 s otoGar3.GL873542 22812022 40 + 22939663 CTGTCCCCCTGGGCA-GTGGCTTCTTGTGCAGAGGAAGCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181768789 35 + 182113224 ---CCTCCCAAATTG---TGTTCCTTGTGCAGAAGAGGGCA i mm10.chr2 C 0 I 29 s canFam3.chr24 47579990 37 + 47698779 CTGTCTCCCCAG--A-GTCGTTCGCCCTGCGGAGGGGGCC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217244 39 - 397369 CGGTCCCCTCCCCCACGTGGCTCACTGTGCAG--GAGGTCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1828916 31 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=1053628.000000 s hg38.chr20_KI270870v1_alt 74868 90 + 183433 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGTCTTATGGATTCTTCTGT--CCCG-----TAGAGACTGAG-ACTCCTACAGGG s panTro5.chr20 129206 90 - 66533130 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGCCTTATGGATTCTTCTGT--CCCG-----TAGAGACTGAG-ACTCCTATAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080009 90 + 62195757 GGTCAGGGCTTAGAGGGTAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGCCTTATGGATTCTTCTGT--CCCG-----TAGAGACTGAG-ACTCCTATAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465217 90 - 578057 GGTCAGGGCTTAGAAGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGTCTTATGGATTCTTCTGT--CCCG-----TAGAGACTGAG-ACTCCTACAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994019 90 - 110113093 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGTTTTATGGATTCTTCTGT--CCTG-----TAGAGACTGAG-ACTCCTACAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720487 90 - 92844088 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGATTTCTGGATTCTTCTGT--CCTG-----TAGAGACTGAG-ACTCCTACAGGG i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96388473 90 + 96509753 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGATTTCTGGATTCTTCTGT--CCTG-----TAGAGACTGAG-ACTCCTACAGGG i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16858699 90 - 16982598 GGTCAGGGTTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGATTTCTGGATTCTTCTGT--CCTG-----TAGAGACTGAG-ACTCCTACAGGG i macNem1.NW_012014244v1 C 0 I 1083 s cerAty1.NW_012001373v1 3660980 90 - 3785965 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGATTTCTGGATTCTTCTGT--CCTG-----TAGAGACTGAG-ACTCCTACAGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46088 90 - 179258 GGTCAGGGCTTAGAGGACAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGAGTTCTGGATTCTTCTGT--CCTG-----TAGAGACTGAG-ACTCCTACAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5531963 90 - 5823884 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGGCAGCTTTCTGGATTCTTCTGT--TCTG-----TAGAGACTGAG-ACTCCTACAGGG i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chrUn_GL286459 14187 90 + 372756 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAAGAGTCAGCTTTATGAACTCTTCTGT--CCTG-----TAGAGACTGAG-ACTCCCACAGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252524 90 + 16356641 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGTCAGCTTTATGAACTCTTCTGT--CCTG-----TAGAGACTGAG-ACTCCCACAGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1120946 90 + 1231380 GGTCAGGGCTTAGAGGGCAGTTT-GTTTTCAAAG------------------------AGAAGGAGTCAGCTTTATGAACTCTTCTGC--CCTG-----TAGAGACTGAG-ACTTCCACAGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650116 90 + 11732439 GGTCAGGGCTTAGAGGGTAGTTT-GTTTTCAAAG------------------------AGAAGGAGTCAGCTTTATGAACTCTTCTGT--CCTG-----TAGAGACTGAG-ACTCCCACGGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56834904 90 + 57149010 GGTCAGGGCTCAGAGGGCAGTGT-GCTTCCAAGG------------------------AGAGAGAGGCAGCTCTACGAACTCTTCTGT--CCTA-----TGGAGACTGAA-GCTCCTACTGGG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1828947 90 - 2029793 GGTCGGGGCTCACAGGGCAGTTT-GTTTTCAAGG------------------------GGAAAGAGGCAGCCTCAGGAACTCTTCTGT--CCTG-----TGCAGACTGAA-GCTCCCACCGGC i proCoq1.NW_012150197v1 I 31 C 0 s otoGar3.GL873542 22812062 79 + 22939663 GGTGAGGGCTCAGAGGGC-------------AGG------------------------AGAAAGAGGCAGTTTCATGAACCCTTCTTT--TCTG-----TGGAGACTTAAGGCTTCTACCAGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181768853 95 + 182113224 AAGCAGGGCTGGAGAGATGGCTCAGCTGTTAAAGGCTAGGCTCACAACCAAAAATATAAGAAAGAAGCAGCTTCATGGAATCTTTT------TG-----TAGAAAG----------------- i mm10.chr2 I 29 I 1 s canFam3.chr24 47580027 77 + 47698779 GGTCGGGGTTTAGA--------------------------------------------GGCAGGCGGCTCCGTCCTGACCCCTTGTGTGCCCTG-GAGCTGGAGACTGAG-GCCTCTGTAAGT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 217283 69 - 397369 --------------------------GGTCAAAG------------------------AGAAGGGGGCAAC-TCAAGAAGGCTTCTGT--TCTGTGCGGTGGTGCCTGAG-GCCCCTGGAGGG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=486.000000 s hg38.chr20_KI270870v1_alt 74958 1 + 183433 -T s panTro5.chr20 129296 1 - 66533130 -T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080099 1 + 62195757 -T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465307 1 - 578057 -T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994109 1 - 110113093 -T i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 14277 1 + 372756 -T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252614 1 + 16356641 -T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121036 1 + 1231380 -T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650206 1 + 11732439 -T i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56834994 1 + 57149010 -T i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1829037 1 - 2029793 -T i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22812141 1 + 22939663 -T i otoGar3.GL873542 C 0 I 6 s dasNov3.JH569290 217352 1 - 397369 A- i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47580104 1 + 47698779 I e cerAty1.NW_012001373v1 3661070 0 - 3785965 C e colAng1.NW_012114444v1 5532053 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181768948 1 + 182113224 I e manLeu1.NW_012101652v1 46178 0 - 179258 C e macNem1.NW_012014244v1 16858789 1083 - 16982598 I e rheMac8.chr10 92720577 1 - 92844088 I e macFas5.chr10 96388563 1 + 96509753 I a score=216485.000000 s hg38.chr20_KI270870v1_alt 74959 21 + 183433 CCCCCCGACCCCCTGGGCACC s panTro5.chr20 129297 21 - 66533130 CCCCCCGACCCCCTGGGCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080100 21 + 62195757 CCCCCCGACCCCCTGGGCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465308 21 - 578057 CCCCCCGACCCCCTGGGCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994110 21 - 110113093 CCCCCTGACTCCCTGGGCACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720578 18 - 92844088 -CCCCTGG--CCCTGGGCACC i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96388564 18 + 96509753 -CCCCTGG--CCCTGGGCACC i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16859872 21 - 16982598 GCCCCTGGCCCCCTGGGCACC i macNem1.NW_012014244v1 I 1083 C 0 s cerAty1.NW_012001373v1 3661070 21 - 3785965 GCCCCTGGCCCCCTGGGCACC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46178 21 - 179258 GCCCCTGGCCCCCTGGGCACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532054 21 - 5823884 CCCCCCAACCCCCTGGGCACC i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chrUn_GL286459 14278 20 + 372756 -TCTCCTGCCCCCTGGGCACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252615 20 + 16356641 -TCTCCTGCCCTCTGGGCACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121037 20 + 1231380 -TCTCCTGCCCCCTGGGCACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650207 20 + 11732439 -TCTCCTGCCCCCTGGGCACC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56834995 21 + 57149010 CCCCCCTACCGCCTGGGCACC i micMur3.chr18 C 0 I 155 s proCoq1.NW_012150197v1 1829038 21 - 2029793 CCCCCCTAGCGCCTGGGCTCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22812148 21 + 22939663 CCCCCCAGCTGCCTGGGCATG i otoGar3.GL873542 I 6 C 0 s mm10.chr2 181768949 20 + 182113224 -CTATCTGATTCCCAGGTACT i mm10.chr2 I 1 I 1 s canFam3.chr24 47580105 17 + 47698779 --CCCCCGCCCCCT--GCCCC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 217353 18 - 397369 ---CCCCCACCCCTGGACACC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=40373.000000 s hg38.chr20_KI270870v1_alt 74980 3 + 183433 TGG s panTro5.chr20 129318 3 - 66533130 TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080121 3 + 62195757 TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465329 3 - 578057 TGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994131 3 - 110113093 TGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720596 3 - 92844088 TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388582 3 + 96509753 TGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16859893 3 - 16982598 TGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661091 3 - 3785965 TGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46199 3 - 179258 TGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532075 3 - 5823884 TGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14298 3 + 372756 TGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252635 3 + 16356641 TGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121057 3 + 1231380 TGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650227 3 + 11732439 TGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1829059 3 - 2029793 TGG i proCoq1.NW_012150197v1 C 0 I 199 s otoGar3.GL873542 22812169 3 + 22939663 TAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181768970 2 + 182113224 TG- i mm10.chr2 I 1 C 0 s canFam3.chr24 47580122 3 + 47698779 TGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217371 3 - 397369 TGA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835016 155 + 57149010 I a score=818973.000000 s hg38.chr20_KI270870v1_alt 74983 163 + 183433 ACG--TTTGCCGAACTTCCCAGG--------------------GGTACTTGCTGATCC-----AGGAGCTTGAGCAGG---AGCCACAGAGAGTT---GGACAAAGAGGCCTTTCTGCTCTGGAA---CAGCCTCGGCTCTGACCTCCTTGGGCC----ATGAATCCCTGAAGAGGGCC------TGGTAGCCCT------------CTTCAGAG-----------------------ACCCGA- s panTro5.chr20 129321 163 - 66533130 ACG--TTTGCCGAACTTCCCAGG--------------------GGTACTTGCTGATCC-----AGGAGCTTGAGCAGG---AGCCACAGAGAGTT---GGACAAAGAGGCCTTTCTGCTCTGGAA---CAGCCTCGGCTCTGACCCCCTTGGGCC----ATGAATCCCTGAAGAGGGCC------TGGTAGCCCT------------CTTCAGAG-----------------------ACCCGA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080124 163 + 62195757 ACG--TTTGCCGAACTTCCCAGG--------------------GGTACTTGCTGATCC-----AGGAGCTTGAGCAGG---AGCCACAGAGAGTT---GGACAAAGAGGCCTTTCTGCTCTGGAA---CAGCCTCGGCTCTGACCCCATTGGGCC----ATGAATCCCTGAAGAGGGCC------TGGTAGCCCT------------CTTCAGAG-----------------------ACCCGA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465332 164 - 578057 ACGT-TTTGCCGAACTTCCCAGG--------------------GGTACTTGCTGATCC-----AGGAGCTTGAGCAGG---AGCCACAGAGAGTT---GGACAAAGAGGACTTTCTGCTCTGGAA---CAGCCTCGGCTCTGAGCCCCTCGGGCC----ATGAATCCCTGAAGAGGGCC------TGGTAGCCCT------------CTTCAGAG-----------------------ACCCAA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994134 153 - 110113093 ACG---GTGCCGAACTTCCCAGA--------------------GGTACTTGCTGATTC-----AGGAGCTTGAGCAGG---AGCCACAGAGAGCT---GGACAAAGAGGCCTTTCTGCTCTGGAA---CAGCCTCGGCTCTGACCCCCTTGGGCC----ATGAGTCCCTGAAGAGGGCC------TGGTAGCTT--------------------------------------------ACCCAA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720599 119 - 92844088 ATG---GTGACGAACTTCACAGG--------------------AGTGTTTTCTGATCC-----AGCAGCCTGTGCAGG---AGCCACGGAGAGTT---GGACAAAGAGACTTTTCCACTCTGGAG---CCGCCC--------------------------------------GAGGGCC------TGGGAGCTT--------------------------------------------ACCCAA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388585 119 + 96509753 ATG---GTGACGAACTTCACAGG--------------------AGTGTTTTCTGATCC-----AGCAGCCTGTGCAGG---AGCCACGGAGAGTT---GGACAAAGAGACTTTTCCACTCTGGAG---CCGCCT--------------------------------------GAGGGCC------TGGGAGCTT--------------------------------------------TCCCAA- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16859896 119 - 16982598 ATG---GTGACGAACTTCACAGG--------------------CGTGTTTTCTGATCC-----AGCAGCCTGTGCAGG---AGCCACGGAGAGTT---GGACAAAGAGACTTTTCCACTCTGGAG---CCGCCC--------------------------------------GAGGGCC------TGGGAGCTT--------------------------------------------ACCCAA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661094 119 - 3785965 ATG---GTGACGAACTTCACAGG--------------------GGTGTTTTCTGATCC-----AGCAGCCTGTGCAGG---AGCCACGGAGAGTT---GGACAAAGAGACCTTTCCACTCAGGAG---CCGCCC--------------------------------------GAGGGCC------TGGGAGCTT--------------------------------------------ACCCAA- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46202 119 - 179258 ATG---GTGACGAACTTCACAGG--------------------GGTGTTTTCTGATCC-----AGCAGCCTGTGCAGG---AGCCACGGAGAGTT---GGACAAAGAGACCTTTCCACTCTGGAG---CCGCCC--------------------------------------GAGGGCC------TGGGAGCTT--------------------------------------------ACCCAA- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532078 119 - 5823884 ACG---GTGACGGACTTCACAGG--------------------GGTGTTTTCAGATCC-----AGCAGCCTGTGCAGG---AGCCATGGAGAGTT---GGACAAAGAGACCTTTCCACTCTGGAG---CAGCCC--------------------------------------GAGGGCC------TGGGAGCTT--------------------------------------------ACCCAA- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14301 152 + 372756 TCA---GTGCTGAACTTCACAGG---------------------GTGCTTGCTGATCC-----AGGAGCCTGAGCAGG---AGCTACAGAGAGTT---AGACAAAGAGGCCTTTCCACTCAGGAA---CAGCCTGAGCTCTGACCCCTTTGGGCT----ATGAATCCCTGAAGAGGGCC------TGGGAGCTT--------------------------------------------ACCCAA- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252638 152 + 16356641 ACA---GTGCTGAACTTCACAGG---------------------GTGCTTGCTGATCC-----AGGAGCCTGAGCAGG---AGCCACATAGAGTT---AGACAAAGAGGCCTTTCCACTCAGGAA---CAGCCTGAGCTCTGACCCCTTTGGGCT----ATGGATCCCTGAAGAGGGCT------TGGGAGCTT--------------------------------------------ACCCAA- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121060 152 + 1231380 ACA---GTGCTGAACTTCGCAGG---------------------GTGCTTGCTGATCC-----AGGAGCCTGAGCAGG---AGCCACAGAGAGTT---AGACAAAGAGGCCTTTCCACTCAGGAA---CAGACTGAGCTCTGACCCCTTTGGGCT----ATGAATCCCTGAGGAAGGCT------TGGGAGCTT--------------------------------------------ACCCAA- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650230 150 + 11732439 ACC---GTGCTGAACTTCACGGG---------------------GTG-TTGCTGATCC-----AGGAGCCTGAGCAGG----GCCACAGAGAGTT---AGACAAAGAGGCCTTTCCACTCAGGAA---CAGCCTGAGCTCTGACCCCTCTGGGCT----GTGAATCCCTGAAGAGGGCT------TGGGAGCTT--------------------------------------------ACCCAA- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22812172 198 + 22939663 ---GATGTGCTGGACCTCACAGG--------------------GGTGTTTTCTGATCC-----AGTA---------------GCCACTGAGAGTT---GGGCATGACCCCCATGTGAGTCTGGGAACTCATCCTGGGCAGGGTGCTTCTTCTGTCTAAAATGCAACTCAGagctgggcattgtggtgggtgcctgtagtcccagctacttgggagggtgaggcaagagaatcacttaagcccaa- i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181768972 154 + 182113224 GTG---GTGCTAGACTTCAAGGA-----------------------ATTTGTTGATCC-----ACAGTGCTGAGCAAAATTAGTGTTCAGGAGTTCAAGGATCTGTAAGTGTTTTCATCCCAAAT---CAACCTGCTCTCCATGCTCTTTAGAGT----AAGAGTCCAGGT-GTAGTCC------TGAGAATTC--------------------------------------------TTCTA-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47580125 136 + 47698779 GTA---CTCCCCCACCGCACAGG----------------------CGCTTACGGACCCCGGGGGGGGGGCTCAGCAGG---GACTGTGAAGAGTC---TGACACGGAGGCCTTTCCATCCTGGAA---GCACCTGGGCTCTGGCGTCCTT------------------------GGGCC------TGGGAGCTC--------------------------------------------ACCACC- i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 217374 151 - 397369 --------GCAGGTCTCTCCAGGGAGCGGGTGCTCCTTGAGGAGGCGTGCCCTGGTCC-----AGGGGACTGAGCAGG---AGCTGCAGAGTGGG---GGGCAGAGAGGCTT----------GGG---CTCCCC----------TACCTTGGCCT----CCGGAACCCAGATGCGGCTT------GGGGAGCGT-------------CC-----------------------------ATCGAAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1829062 199 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835016 155 + 57149010 I a score=268136.000000 s hg38.chr20_KI270870v1_alt 75146 43 + 183433 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CAAAGTGCCACTCGAGGGTTT-T s panTro5.chr20 129484 43 - 66533130 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CAAAGTGCCACTCGAGGGTTT-G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080287 43 + 62195757 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CAAAGTGCCACTCGAGGGTTT-G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465496 43 - 578057 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CAAAGTGCCACTCGAGGGTTT-G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994287 43 - 110113093 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CCAAGTGCCACTCAAGGGTTT-G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720718 43 - 92844088 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CACAGTGCCACTCGGGGGCTG-G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388704 43 + 96509753 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CACAGTGCCACTCGGGGGCTG-G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16860015 43 - 16982598 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CACAGTGCCACTCGGGGGCTG-G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661213 43 - 3785965 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CACAGTGCCACTCGGGGGCTG-G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46321 43 - 179258 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CACAGTGCCACTCGGGGGCTG-G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532197 43 - 5823884 GGCA---GGG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------CAAAGTGCCACTCGGGGGCTG-G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14453 42 + 372756 GGCA----GG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------TAAAGTGCCACTCAGTGGGCT-G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252790 42 + 16356641 GGCA----GG--------GGGCTGA-------------------------------------TTCTGTC--------------------------------------------------------TAAAGTGCCACTCAGGGGGCT-G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121212 42 + 1231380 GGCA----GG--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------TAAAGTGCCACTCAGGGGGCT-G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650380 39 + 11732439 GGCA-----G--------GGGCTGC-------------------------------------TTCTGTC--------------------------------------------------------TAAAGTGCCACTC--GGGGCT-C i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56835171 43 + 57149010 GGCA---GGG--------GGGCTGC-------------------------------------TTTTGTC--------------------------------------------------------TAAAGTGCAGCTCAAGGGGCCT- i micMur3.chr18 I 155 I 3 s otoGar3.GL873542 22812372 143 + 22939663 ggta---gaggttgctgtgagctgtgacacaatggcactctaccaagggtgacatagtgagactctgtctcaaaataaaaaaaaaaaaaaGAATAGAATAaaataaatagataaataaataaaAATAAAATGCAGCTCAGGGAGCC-- i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181769126 27 + 182113224 -----------------------GC-------------------------------------TTCTGTT--------------------------------------------------------CAAACAGCAACTGAGGGT----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47580262 39 + 47698779 --CA---GGG--------GAGCTGC-------------------------------------T--CGTC--------------------------------------------------------CAACATGCAGCCCAGGGGGCC-T i canFam3.chr24 I 1 I 1 s dasNov3.JH569290 217525 16 - 397369 GGCAGCCGAG--------GGGCTG---------------------------------------------------------------------------------------------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1829062 199 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=1276795.000000 s hg38.chr20_KI270870v1_alt 75189 101 + 183433 TGTGACCCTCAGCCATTGCCCACAGATCTGGAGGTAGCCTC-AGTTGTTCAGAGCTAATGCTCTG-G-CCCCTC-TTGGAAGATTCTGGCAAAGGCAGTGGTCAC s panTro5.chr20 129527 101 - 66533130 TGTGACCCTCAGCCATTGCCCACAGATCTGGAGGTAGCCTC-AGTTGTTCAGAGCTAATGCTCTG-G-CCCCCC-TTGGAAGATTCTGGCAAAGGCAGTGGTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080330 101 + 62195757 TGTGACCCTCAGCCATTGCCCACAGATCTGGAGGTAGCCTC-AGTTGTTCAGAGCTAATGCTCTG-G-CCCCCC-TTGGAAGATTCTGGCAAAGGCAGTGGTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465539 101 - 578057 TGTGACCCTCAGCCATTGCCCACAGATCTGGAGGTAGCCTC-AGTTGTTCAGAGCTGATGCTCTG-G-CCCCCC-TTGGAAGATTCTGGCAAAGGCAGTGGTCGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994330 101 - 110113093 TGTGACCCTCAGTCATTGCCCACAGATCTGGAGGTAGCCTC-AATTGTTCAGAGCCAATGCTCTG-G-CCCCCC-TTGGAAGATTCTGGCAAAGGCAGTGGTCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720761 102 - 92844088 TGTGACCCTCAGTCGTTGCCCACAGCTCTGGAGGTGGCCTC-AGTTGTTCGGAGCCAAAGCTCTG-G-CCCCCCATTGGTAGATTCTGGCAAAGGCAGTGATCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388747 102 + 96509753 TGTGACCCTCAGTCGTTGCCCACAGCTCTGGAGGTGGCCTC-AGTTGTTCGGAGCCAAAGCTCTG-G-CCCCCCATTGGTAGATTCTGGCAAAGGCAGTGATCGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16860058 102 - 16982598 TGTGACCCTCAGTCGTTGCCCGCAGCTCTGGAGGTGGCCTC-AGTTGTTCGGAGCCAAAGCTCTG-G-CCCCCCATTGGTAGATTCTGGCAAAGGCAGTGATCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661256 102 - 3785965 TGTGACCCTCAGTCGTTGCCCACAGCTCTGGAGGTGGCCTC-AGTTGTTCGGAGCCAAAGCTCTG-G-CCCCCCATTGGTAGATTCTGGCAAAGGCAGTGATCAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46364 102 - 179258 TGTGACCCTCAGTCGTTGCCCACAGCTCTGGAGGTGGCCTC-AGTTGTTCAGAGCCAAAGCTCTG-G-CCCCCCATTGGTAGATTCTGGCAAAGGCAGTGATCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532240 103 - 5823884 TGTGACCCTCAGTCATTGCTCACAGCTCTGGAGGTGGCCTC-AGTTGTTCGGAGCCAAAGCTCTG-GCCCCCCCATTGGTAGATTCTGGCAAAGGCAGTGATCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14495 101 + 372756 TGTGACCCTCAGTCATTGCTCACAGATCTCGAGGTAGCCTC-AATTGTTCAGTGCCAATGCTCTG-A-CCCCTC-TTGGAAGATTCTGGCAAAGGCAGTGGTCAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252832 101 + 16356641 TGTGACCCTCAGTCATTGCTCACAGATCTGGAGGTAGCCTC-AATTGTTCAGAGCCAATGCTCTG-A-TCCCTC-TTGGAAGATTCTGGCAAAGGCAGTGGTCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121254 101 + 1231380 TGTGACCCTCAGTCAATGCTCACAGATCTGGAGGTACCCTC-AATTGTTCAGAGCCAATGCTCTG-A-CCCCTC-TTGGAAGATTCTGGCAAAGGCAGTGGTCAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650419 101 + 11732439 TGTGACCCTCAGTCATTGCTCACAGATCTGGAGGTAGCCTC-AATTGTTCAGCGCCAATGCTCTG-A-CCCCTC-TTGGAAGATTCTGGCAAAGGCAGTGGTCAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56835217 100 + 57149010 TGTGACCCTCAGGCATTGCCCACAGATCTGGAGGCAACCCC--AATGCTTGGAGCCAATGCTCTG-G-CCCCTC-GTGGAAGATTCCAGCAAAGGTAGTGGTCAC i micMur3.chr18 I 3 I 1312 s proCoq1.NW_012150197v1 1829261 101 - 2029793 TGTGACCCTCAGGCATTGCCCACAGATCTGGAGGCAGCCCC-AAATGCTTGGAGCCGGTGCTCTG-G-CCCTTC-GTGGAAGATTCCAGCAAAGGCGGTGGTCAC i proCoq1.NW_012150197v1 I 199 C 0 s otoGar3.GL873542 22812515 102 + 22939663 TGTGATCCTCAGGTATGACCCACAGATCTGGACACAGCCCC-AAATGTTTGGAGACAATGCTCTGCT-CCCCTC-TTGGAAGATTCCAGCAAAGGTAGTGGTCAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181769153 70 + 182113224 --------------ATTGCCTGCAGACCTCTGGGTAGCCCCCAGATGTGTAGATTCTGTATTCTT-G-TC-----TT---AAACTCT--CAGGGGC--------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47580302 97 + 47698779 CGTGACCCCCAGGCACCGTCCGCAGGTT---GGGCAGCCCC-AG-TGTTCAGAGCCGATTCTCTG-G-GCGCTC-TTGGAAGACTCTGGTAAGGGCAGCTGTCAC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 217541 95 - 397369 TGGGGCCCTCAGACCCTGCCCACAGGCC-AGAGGCAGCCCT-AA-TGCCGAGAACCT-TGCTCCA-G-GCCTC--TTGGAAGA-TCGGGGGGAGGCAGCAGCCA- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=1485017.000000 s hg38.chr20_KI270870v1_alt 75290 162 + 183433 CTACTCCCTTGAATGCCCC-TGGTGCATGAG-TGGGGAAACACTCTCTGAGATGACCCCTTCT---------AGCCATGTGGGATGCAAAGTTGCTCTGGTCTGGGGGTTGCAGCAGCCTCTACTTGGAAGCTC-TGTTAGTG-CCGGAGATGTCAGGGAGAGGCTGGCAGAGGG s panTro5.chr20 129628 162 - 66533130 CTACTCCCTTGAATGCCCC-TGGTGCATGAG-TGGGGAAACACTGTCTGCGATGACCCCTTCT---------AGCCACGTGGGATGCAAAGTTGCTCTGGTCTGGGGGTTGCAGCAGCCTCTACTTGGAAGCTC-TGTTAGTG-CCGGAGATGTCAGGGAGAGGCTGGCAGAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080431 162 + 62195757 CTACTCCCTTGAATGCCCC-TGGTGCATGAG-TGGGGAAACACTGTCTGCGATGACCCCTTCT---------AGCCACGTGGGATGCAAAGTTGCTCTGGTCTGGGGGTTGCAGCAGCCTCTACTTGGAAGCTC-TGTTAGTG-CCGGAGATGTCAGGGAGAGGCTGGCAGAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465640 161 - 578057 CTACTCCCCTGAATGCCCC--GGTGCATGAG-TGGGGAAACACTCTCTGAGATGAACCCTTCT---------AGCCGTGTGGGATGCAAAGTTGCTCTGGTCTGGGGGTTGCAGCAGCCTCTACTTGGAAGCTC-TGTTAGTG-CCGGAGATGTCAGGGAGAGGCTGGCAGAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994431 162 - 110113093 CTACTCCCTTGAATGCCCC-TGGTGCATGAG-CAGGGAAAAACTCTCTGAGATGACCCCTTCT---------AGCCATGTGGGATGCGAAGTTGCTCTGGTCTGGGGATTGCAGCAGCCTCTACTTGGAAGCTC-TGTTAGTA-CCGGAGATGTCAGGGAGAGGCTGGCAGAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92720863 162 - 92844088 CCACTGCCTTGAATGCCCC-AGGTGTGTGAG-CGCGAAAA-ACTCTCTGAGATGACCCCGTCT---------AGCCGTGCGGGATGCAAAGTTGCTCTGGTCTGGGGGTTGCAGCAGCCTCTGCTTGGAAGCTC-TGTTAGTGCCCAGAGATGTCAGGGAGAGGCTGGTAGAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96388849 162 + 96509753 CCACTGCCTTGAATGCCCC-AGGTGTGTGAG-CGCGAAAA-ACTCTCTGAGATGACCCCGTCT---------AGCCGTGCGGGATGCAAAGTTGCTCTGGTCTGGGGGTTGCAGCAGCCTCTGCTTGGAAGCTC-TGTTAGTGCCCAGAGATGTCAGGGAGAGGCTGGTAGAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16860160 162 - 16982598 CCACTGCCTTGAATGCCCC-AGGTGTGTGAG-CGCGAAAA-ACTCTCTGAGATGACCCCGTCT---------AGCCGTGCGGGATGCAAAGTTGCTCTGGTCTGGGGGTTGCAGCAGCCTCTGCTTGGAAGCTC-TGTTAGTGCCCAGAGATGTCAGGGAGAGGCTGGTAGAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661358 162 - 3785965 CCACTGCCTTGAATGCCCC-AGGTGTGTGAG-CGCGAAAA-ACTCTCTGACATGACCCCGTCT---------AGCCGTGCGGGATGCAAAGTTGCTCTGGTCTGGGGGTTGCAGCAGCCTCTGCTTGGAAGCTC-TGTTAGTGCCCAGAGATGTCAGGGAGAGGCTGGTAGAGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46466 162 - 179258 CCACTGCCTTGAATGCCCC-AGGTGTGTGAG-CATGAAAA-ACTCTCTGAGATGACCCTGTCT---------AGCCGTGCGGGATGCAAAGTTGCTCTGGTCTGGGGCTTGCAGCAGCCTCTGCTTGGAAGCTC-TGTTAGTGCCCAGAGATGTCAGGGAGAGGCTGGTAGAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532343 162 - 5823884 CCACTGCCTTGGATGTCCC-AGGTGTGTGAG-CGGGAAAA-ACTCTCTGAGATGACCCCTTCT---------AGCCATGTGGGATGCAAAGTCGCTCTGGTCTGGGGGTTGCAGCAGCCTCTACTTGGAAGCTC-TGTTAGTGCCCAGAGATGTCAGGGAGAGGCTGGCAGAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14596 161 + 372756 CCACTGACTTGAATGCTCC-TGGTGCATGAG-TGGGGAAAAAC--TCTGAGATGACCCTTTCT---------AGCCATGTGGGATGCGAAGTTGCTCTGGTCTGGGGGTTGCAGTAGCTTCTACTTTGAATCTC-TCTTAGTGCCCAGAGATGTCAGGGAGAGGCTGGCAGAGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16252933 158 + 16356641 CCACTGCCTTGAATGCTCC-TGGTGCATGAG-TGGGGAAAAAC--TCTGAGATGACCCTTTGT---------AGCCATGTGGGATGCGAAGTTGCTCTGCTCTGGGGGTTGC---AGCCTCTGCTTGGTAGCTC-TGTTAGTGCCCAGAGATGTCAGGGAGAGGCTGGCAGAGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121355 161 + 1231380 CCACTGCCTTGAATGCTCC-TGGTGCATGAG-TGGGGAAAAGC--TCTGAGATGACCCTTTCT---------AGCCATGGAGGATGCGAAGTTGCTTTGGTCTGGGGGGTGCAGTAGCCTCTACTTGGAAGCTC-CGTTAGTGCCCAGAGATGTCAGAGAGAGGCTGGCAGAGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650520 159 + 11732439 CGACTGCCTTGAATCCTTC-TGGTGCATGAG-T-GGGAAAAAC--TCCGAGATGACCCTTTCT---------AGCC-TGTGGGATGCGAAGTTGCTCTGGTCTGGGGGTTGCAGCGGCCTCTACTTGGAAGCCC-TGTTAGTGCCCAGAGATGTCAGGGGGAGGATGGCAGAGGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1829362 163 - 2029793 TCATGGCCCTGAATGCACC-TGGTGCCCGAG-GGGGAGAACCCACTCTTGGATGACCCCTTCT---------AGCCGCTGGGGCCGCACAGTTGCTCTGTCCTGGGGGTGAAAGCAGCCTCTACTTGACAGTCC-TGGTAGTGTCCAGAGACGTCAGGTAGAGGCCGGCGGAGGG i proCoq1.NW_012150197v1 C 0 I 887 s otoGar3.GL873542 22812617 157 + 22939663 CCATTGTCCTGAATGCCTC-TGGTGCCCAAGTAGGGAGAACCCACTCCTAGATGACTCCTTCT---------AGCCTTTGGGGCTGCAGAGTTGCTCTGTCTTGGAGGTTAAAGCAGCCTCCACTTGAAAACCC-TGGTAGTGTCCAGAGATGCTAGGGAGAGGTTGG------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181769223 118 + 182113224 -----------------------TGTATGAT----GAAAGGCCACTCTGAGAAGA-CCTTCCT---------CACTTTTGGAATTACAAAGT-GTTCTGTACT-AATATTGTGGCAGTTTCTGCTTACATTCT--TGTGAGTGTTCAGAGATGGCAGGG---------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47580399 110 + 47698779 ACGTCGGCCGGAGTGCTCCAAGGAGAAGCTG-CGGGCAGA---------------------------------GCCCTCGGGGCTGCAAAGTTGCTCTGC-----------------CCTCTGGCTGAGAGCACTTGCTGGGCATCAGACCTGCCCGGGAG-------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217636 134 - 397369 CTACTGCCC-GAATGCCGC-CAGTGCCCGAT-TTGTGGACAGCCGCCTCCAGAGCCCTGCACCGTGGGTAGAAGTCACTGTGGCTGCAAAATTGCT---GCCTGGAGATGATGGTGGCCTTTAT---GGGGCGC--------------------------------AGCAGAAGG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835317 1312 + 57149010 I a score=283854.000000 s hg38.chr20_KI270870v1_alt 75452 37 + 183433 TATGCGGCCAC------GGGGGTGCATGCTGGGCAG-CTCTGGC s panTro5.chr20 129790 37 - 66533130 TATGCGGCCAC------GGGGGTGCACGCTGGGCAG-CTCTGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080593 37 + 62195757 TATGCGGCCAC------GGGGGTGCACGCTGGGCAG-CTCTGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465801 37 - 578057 TATGCGGCCAC------GGGGGTGCACGCTGGGCAG-CTCTGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994593 37 - 110113093 TATGCGGCCAC------GGGGGTGCACGCTGGGCAG-CTCTGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92721025 36 - 92844088 TATGCGGCCAT-------GGGGTGCATGCTGGGCAG-CTCTGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96389011 36 + 96509753 TATGCGGCCAT-------GGGGTGCACGCTGGGCAG-CTCTGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16860322 36 - 16982598 TATGCGGCCAT-------GGGGTGCACGCTGGGCAG-CTCTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661520 36 - 3785965 TATGTGGCCAT-------GGGGTGCACTCTGGGCAG-CTCTGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46628 36 - 179258 TATGCGGCCAT-------GGGGTGCACGCTGGGCAG-CTCTGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532505 37 - 5823884 TATGCGGCCAT------GGGGGTGCACGCTGGGCAG-CTCTGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14757 37 + 372756 TATGCGGGCAC------TGGCATGCACGCTGGGCAG-CTCTGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16253091 37 + 16356641 TATGCGGGCAC------GGGGGTGCATGCTGGGCAG-CTCTGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121516 37 + 1231380 TATGCGGGCAC------GGGGGTGCATGCTGGGCAG-CTCTGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650679 37 + 11732439 TATGCAGGCAT------GGGGGTGCATGCTGGGCAG-CTCTGGC i aotNan1.NW_018500483v1 C 0 I 118 s otoGar3.GL873542 22812774 30 + 22939663 --------CAT------GGATGTGCATTCTGGGCAGCCCCCAGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181769341 35 + 182113224 TGTACTGGAAT------GAAGGTGCAGGCTTGACTG-CAGTG-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47580509 11 + 47698779 --------CAG------GGACGGGC------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217770 35 - 397369 TGTTCAGGCACTCGCCTTGGTTTGGCCCCTTGGTG--------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1829525 887 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835317 1312 + 57149010 I a score=207433.000000 s hg38.chr20_KI270870v1_alt 75489 25 + 183433 AGCTGACCAACGG------------------CAGCCTGGATGG s panTro5.chr20 129827 25 - 66533130 AGCTGACCAACGG------------------CAGCCTGGATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080630 25 + 62195757 AGCTGACCAACGG------------------CAGCCTGGATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465838 25 - 578057 AGCCGACCAACGG------------------CAGCCTGGATGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994630 43 - 110113093 AGCTGACCAACGGCAGTGCTGGCTCCGCAGTCAGCCTGGATGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92721061 43 - 92844088 AGCTGACCAACGGCAGTGCTGGCTCCACAGACAGCCTGGATGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96389047 43 + 96509753 AGCTGACCATCGGCAGTGCTGGCTCCACAGACAGCCTGGATGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16860358 43 - 16982598 AGCTGACCAACGGCAGTGCTGGCTCCACAGACAGCCTGGATGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661556 43 - 3785965 AGCTGACCAACGGCAGTGCTGGCTCCACAGACAGCCTGGATGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46664 43 - 179258 AGCTGACCAACGGCAGTGCTGGCTCCACAGACAGCCTGGATGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532542 43 - 5823884 AGCTGACCAACGGCAGTGCTGGCTCCACAGACAGCCTGGATGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14794 40 + 372756 AGCTGACCAA-GGCAGTGCTGGCTCCGCAGTCAGCCTGGAT-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16253128 41 + 16356641 AGCTGACCAGCGGCAGTGCTGGCTCTGCAGTCAGCCTGGAT-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121553 41 + 1231380 AGCTGACCAACGGCAGTGCTGGCTCCTCAGTCAGCCTGGAT-- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22812804 42 + 22939663 TGCTGACCTACAGCAATGCCCATTTTGTAG-CAGCCTAGTTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181769376 14 + 182113224 --------------------GGCTAC-----CATGTTGG---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47580520 25 + 47698779 AGCTGAGCGACAGCAGGGCAGGTTC------------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217805 25 - 397369 GGCTGACGGGCAACGGTGC------------------AGATGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1829525 887 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835317 1312 + 57149010 I e aotNan1.NW_018500483v1 2650716 118 + 11732439 I a score=829002.000000 s hg38.chr20_KI270870v1_alt 75514 94 + 183433 TGGCTGGAGCTTGG--------CCTGTCCC--TGCTGTGGATGTGGTGGGCGCTCTCCCTGGTGCTGCTCAGA-GACTCACTCCCT----------------TCCTCTCTGGCCTGGGGTC s panTro5.chr20 129852 94 - 66533130 TGGCTGGAGCTTGG--------CCTGTCCC--TGCTGTGGACGTGGTGGGCGCTCTCCCTGGTGCTGCTCAGA-GACTCACTCCCT----------------TCCTCTCTGGCCTGGGGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080655 94 + 62195757 TGGCTGGAGCTTGG--------CCTGTCCC--TGCTGTGGACGTGGTGGGCGCTCTCCCTGGTGCTGCTCAGA-GACTCACTCCCT----------------TCCTCTCTGGCCTGGGGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465863 94 - 578057 TGGCTGGAGCTTGG--------CCTGTCCC--TGCTGTGGACGTGGTGGGCGCTCTCCCTGGTGCTGCTGAGA-GACTCACTCCCT----------------TCCTCTCTGGCCTGGGGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994673 96 - 110113093 TGGCTGGAGCTTGG--------CCTGTCCCCTCTCTGTGGACGTGGTGGGCGCTCTCCCTGGTGCTGCTCAGA-GACTCACTCCCT----------------TCGTCTCTGGCCAGGGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92721104 96 - 92844088 TGGCTGGCGCTCGG--------CCTGTCCCCTGGCTGTGGAGGTGGTGGGTGCTCTCCCTGGTGCTGCCCAGA-GACTCACTCCCT----------------TCCTCTCTGGCCTGGGGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96389090 96 + 96509753 TGGCTGGCGCTCGG--------CCTGTCCCCTGGCTGTGGAGGTGGTGGGTGCTCTCCCTGGTGCTGCCCAGA-GACTCACTCCCT----------------TCCTCTCTGGCCTGGGGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16860401 96 - 16982598 TGGCTGGCGCTTGG--------CCTGTCCCCTGGCTGTGGATGTGGTGGGTGCTCTCCCTGGTGCTGCCCAGA-GACTCACTCCCT----------------TCCTCTCTGGCCTGGGGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661599 96 - 3785965 TGGCTGGCGCTTGG--------CCTGTCCCCTGGCTGTGGACGTGGTGGGTGCTCTCCCTGGTGCTGCCCAGA-GACTCACTCCCT----------------TCCTCTCTGGCCTGGGGTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46707 96 - 179258 TGGCTGGCGCTTGG--------CCTGTCCCCTGGCTGTGGACGTGGTGGGTGCTCTCCCTGGTGCTGCCCAGA-GACTCACTCCCT----------------TCCTCTCTGGCCTGGGGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532585 96 - 5823884 TGGCTGGCGCTTGG--------CCTGTCCCCTGGCTATGGACGTGGTGGGTGCTCTCCCTGGTGCTGCCCAGA-GACTCACTCCCT----------------TCCTTTCTGGCCTGGGGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14834 105 + 372756 TGGCTGGAGCTTGG--------CCTGTCCCCT-AC-GTGGACGTTGTGGGCGCTCTCCCTGGTGCTGCCCAGA-GACCCAGCCCCCCCAGCCCTG-----CCTCCGCCCGGGCCTGGGGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16253169 106 + 16356641 TGGCTGGAGCTTGG--------CCTGTCCCCTGGC-GTGGAGGTGGTGAGCGCTCTCCCTGGTGCTGCCCAGA-GACCCAGCCCCCACCGCCCTG-----CCTCCGCCTGGGCCTAGGGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121594 105 + 1231380 TGGCTGGAGCTTGG--------CTTGTCCCCTGGC-ATGGACGTGGTGGGCGCTCTCCCTGGTGCTGCCCAGA-GACCCAGCCCCC-CCGCCCCG-----CCTCCACCCAGGCCTGGTGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650834 93 + 11732439 TGGCTGGAGCTCGG--------CCTGTGCCCTGGC-GTGGATGTGGTGGGTGCTCTCCCTGGTGCTGTCCAGA-GACCCAGCCCCC------------------CGCCTGGGCCTGGGGTC i aotNan1.NW_018500483v1 I 118 C 0 s otoGar3.GL873542 22812846 89 + 22939663 TGGCTGGGGCTTGA--------CCTGTCTCTTGGC------TGTGGTGGACACTCTTCCCAGTGCTGCCTGGA--ACTCTTCCCCT----------------CCTCCTCTGGCCTGGGGTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181769390 68 + 182113224 -------------------------------------------TCATAGG-GCTC-ACAAGGTGCTGCCTGGACCTCTCACTTCCC-TTGATTAG-------TCCTCCTTTGGTCCTGGTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47580545 111 + 47698779 TCGCTGGAGGTTGG--------CCTGTTGCCTGGCCCTGGCCGTGGGGGACACTCCCGCTGGTGCTGCCTAGA-GCCCAGGCCCCT-CCTCTCTGGGTCCCATGTCCTCTGGCCTGGGGTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217830 94 - 397369 --GGAGGGGCCTGGGAGTAGGACCTGGGAGCTGAC--CGGCCGT--CAGGCGCTCTCCCTGGTCCTGCCTGGG-G---CACCCCCC----------------TCTAC-CAGGCCCATTGTC i dasNov3.JH569290 C 0 I 8 e proCoq1.NW_012150197v1 1829525 887 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835317 1312 + 57149010 I a score=468075.000000 s hg38.chr20_KI270870v1_alt 75608 49 + 183433 ACTGAATGTGCAGACAATGACA-------------TTTGTGGTGGTGTGGTGGGTAGAGGAG s panTro5.chr20 129946 49 - 66533130 ACTGAATGTGCAGACAATGACA-------------TTTGTGGTGGTGTGGTGGGGAGAGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080749 49 + 62195757 ACTGAATGTGCAGACAATGACA-------------TTTGTGGTGGTGTGGTGGGGAGAGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 465957 49 - 578057 ACTGAATGTGCAGACAATGACA-------------TTTGCGGTGGTGTGGTGGGTAGAGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994769 49 - 110113093 CCTGAATGTGCAGACAATGACA-------------TTTGTGGTGGTGTGGGGGGTAGAGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92721200 49 - 92844088 ACTGAATGTGCAGACAATGACA-------------TTCGTGGTGGTGTGGGGGGCAGAGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96389186 49 + 96509753 ACTGAATGTGCAGACAATGACA-------------TTCGTGGTGGTGTGGGGGGCAGAGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16860497 49 - 16982598 ACTGAATGTGCAGACAATGACA-------------TTCGTGGTGGTGTGGGGGGCAGAGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661695 49 - 3785965 ACTGAATGTGCAGACAATGACA-------------TTCGTGGTGGTGTGGGGGGCAGAGGAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46803 49 - 179258 ACTGAATGTGCAGATAATGACA-------------TTCGTGGTGGTGTGGGGGGCAGAGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532681 49 - 5823884 ACTGAATGTGCAGACAATGACA-------------TTTGTGGTGGTGTAGGGGGCAGAGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14939 49 + 372756 ACTGAATGTGCAGACAATGACA-------------TTTGTGGTGGTATGGGGGGCAGAGCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16253275 49 + 16356641 ACTGAGTGTGCAGACAATGACA-------------TTTGTGGTGTTGTGGGGGGCAGAGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121699 49 + 1231380 ACTGAATGTGCAGGCAATGACA-------------TTTGTGGTGGTGTGGGGGGTAGAGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650927 49 + 11732439 ACTGAATGTGCAGACAGTGACA-------------TTTGTGGTGGTGCGGGGGGCAGAGCAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22812935 40 + 22939663 AATACATGTGCAGATGATGACA----------------------GGGTGCAGGGCAGAGGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181769458 62 + 182113224 ATCAAATGTGCAGATGATGATAATGGGTGATATTGTATGCGAGCATGTAACATGGAATAAAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47580656 43 + 47698779 ACCGAAGGGGTCCTGGAGGACA-------------TGGGTGGCTCTGTGT------GAGCAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1829525 887 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835317 1312 + 57149010 I e dasNov3.JH569290 217924 8 - 397369 I a score=5122366.000000 s hg38.chr20_KI270870v1_alt 75657 648 + 183433 A-------CCCACACCACTC-TGCACTGGGGAGACA-----GGGG-TCAGA-GCCTGACTAACTGTCTTCCTGGTGCTGCTCAGTCTGGTGATGTCTGGGCCGCTTGG-AATGCCAGTTTGCACAACCCAGTACTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAGACTGACAAAGTGCCAGAGAGAAACCCG--GGGCCTCCAGCCGCTGCTCGGTG--GC-AGTGGGCGGGCTGGTGGGGGCTGAGCTCT--TCCTGG--------ACGGACTCAGTGCAAAAGGTGCGTCTACTTTGGAAAAGACTGAGCAAGGCTTGTGTCCACCCAGTCCCTCTGTCGGGGCTCAGGGTGGGGATGAGACCGGGAACAACCAGAACACTTTGGTCAGCACCGGGCCTGGAGTAGATGAGGAGGTAGAGAACTGACCCAGCTGGTGGAACAGGGGTC-------AGGAGGTTAGCTGTGGGGTGGGTGG---GGGCTG--CTGGCGGTCACCTGAT-CTGCGAGCAGGCAGGGTACTGGACGGTCAGCCAGAC-TTTCATGTTACTCAGGCATCTTGAA-----GAG-TGGATGCTC-TGCCTGTCCCAATGCTGGAAGACACATCTC--AGAGCCCCTCTTTTGTTGCCTGTTCTCTTGTAGGAACCTG------------------------GGCGG---GAGAGTGGAG------------CAGGGTGCCCGCAGGGGCTGGGGG s panTro5.chr20 129995 648 - 66533130 A-------CCCACACCACTC-TGCACTGGGGAGACA-----GGGG-TCAGA-GCCTGACTAACTGTCTTCCTGGTGCTGCTCAGTCTGGTGATGTCTGGGCCGCTTGG-AATGCCAGTTTGCACAACCCAGTACTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAGACTGACAAAGTGCCAGAGAGAAACCCG--GGGCCTCCAGCCGCTGCTCGGTG--GC-AGTGGGCAGGCTGGTGGGGGCTGAGCTCT--TCCTGG--------ACGGACTCAGTGCAAAAGGTGCGTCTACTTTGGAAAAGACTGAGCAAGGCTTGGGTCCAGCCGACCCCTCTGTCGGGGCTCAGGGTGGGGATGAGCCCGGGAACAACCAGAACACTTTGGTCAGCCCCGGGCCTGGAGTGGATGAGGAGGTAGAGAACTGACCCAGCTGGTGGAACAGGGGTC-------AGGAGGTTAGCTGTGGGGTGGGTGG---GGGCTG--CTGGCGGTCACCTGAT-CTGCGAGCAGGCAGGGTACTGGTCGGTCAGCCAGAC-TTTCATGTTACTCAGGCATCTTGGA-----GAG-TGGATGCTC-TGCCTGTCCCAATGCCGGAAGACACATCTC--AGAGCCCCTCTTTTGTTGCCTGTTCTCTTGTAGGAACCTG------------------------GACGG---GAGAGTGGAG------------CAGGGTGCCCGCAGGGGCTGGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62080798 648 + 62195757 A-------CCCACACCACTC-TGCACTGGGGAGACA-----GGGG-TCAGA-GCCTGACTAACTGTCTTCCTGGTGCTGCTCAGTCTGGTGATGTCTGGGCCGCTTGG-AATGCCAGTTTGCACAACCCAGTACTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAGACTGACAAAGTGCCAGAGAGAAACCCG--GGGCCTCCAGCCGCTGCTCGGTG--GC-AGTGGGCAGGCTGGTGGGGGCTGAGCTCT--TCCTGG--------ACGGACTCAGTGCAAAAGGTGCGTCTACTTTGGAAAAGACTGAGCAAGGCTTGGGTCCAGCCGACCCCTCTGTCGGGGCTCAGGGTGGGGATGAGCCCGGGAACAACCAGAACACTTTGGTCAGCCCCGGGCCTGGAGTGGATGAGGAGGTAGAGAACTGACCCAGCTGGTGGAACAGGGGTC-------AGGAGGTTAGCTGTGGGGTGGGTGG---GGGCTG--CTGGCGGTCACCTGAT-CTGCGAGCAGGCAGGGTACTGGACGGTCAGCCAGAC-TTTCATGTTACTCAGGCATCTTGGA-----GAG-TGGATGCTC-TGCCTGTCCCAATGCCGGAAGACACATCTC--AGAGCACCTCTTTTGTTGCCTGTTCTCTTGTAGGAACCTG------------------------GACGG---GAGAGTGGAG------------CAGGGTGCCCGCAGGGGCTGGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466006 649 - 578057 A-------CCCACACCACTC-TGCACTGGGGAGACA-----GGGG-TCAGA-GCCTGACTAACTGTCTTCCTGGTGCTGCTCAGTCTGGTGATGTCTGGGCCGCTTGG-AATGCCAGTTTGCACAACCCAGTACTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAGACTGACAAAGTGCCAGAGAGAAACCCG--GGGCCTCCAGCAGCTGCTCGGTG--GC-AGTGGGCAGGCTGGTGGGGGCTGAGCTCT--TCCTGG--------ATGGACTCAGTGCAAAAGGTACATCTACTTTGGAAAAGACTGAGCAAGGCTTGGGTCCACCCAATCCCTCTGTCGGGGCTCAGGGTGGGGATGAGACCGGGAACAACCAGAACACTTTGGTCAGCACCGGGCCTGGAGTGGATGAGGAGGTAGAGAACTGACCCAGCTGGTGGAACAGGGGTC-------AGGAGGTTAGCTGTGGGGTGGGTGG---GGGCTG--CTGGTGGTCACCTGAT-CTGCGAGCAGGCAGGGTACTGGACGGTCAGCCAGAC-TTTCATGTTACTCAGGCATCTTGGA-----GAG-TGGATGCTC-TGCCTGTCCCAATGCTGGGAGACACATCTTAGAGAGCCCCCCTTTTGTTGCCTGTTCTCTTGTAGGAACCTG------------------------GGCGG---GAGAGTGGAG------------CAGGGTGCCCGCAGGGGCT-GGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109994818 645 - 110113093 A-------CCC-CACCACTC-TGCACTGGGGAGAT-------GGG-TCAGA-GCCTGACTAACTGTCTTCCTGGTGCCACTCAGTCTGGTGATGGCTGGGCCGCTTGG-AATGCCAGTTTGCACAACCCAGTTCTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAGACTGACGAAGTGCCAGAGAGAAACCTG--GGGCCTCCAGCAGCTGCTCAGTG--GC-AGCAGGCAGGCTGGTGGGGGCTGAGCTCT--TCCTAG--------ATGGACTCAGTGCAAAAGGCACATCTACTTTGGAAAAGACTGAGCAAGGCTTGGGGCCACCCAGTCCCTCTGTCGGGGCTCACGGTGGGGATGAGACCAGCAACAACCAGAACACTTTGGTCAGCACCAGGCCTGGAGTGGATGAGGAGGTCGAGAACTGACCCAGCTGGTGGAACAGGGGTC-------AGGAGGTTAGCTGTGGGGTGGGTGG---GGGCTG--CTGGCGGTCACCTGAT-CTGTGAGCGGGCAGGGTACTGGATGGTCAGCCAGACTTTTCATGTTACTCAGGCATCTTGGA-----GAG-TGGATGCTC-TGCCTGTCCCAATGCTGGAAGACGCATCTC--AGAGCCCCTCTTTTGTTGCCTGTTCTCTTGCAGGAACCTG------------------------GGCGG---GAGAGTGGAG------------CGGGGCACCTGCGGGGTTT-GGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92721249 648 - 92844088 ACCCACACCCCACACCACTC-TGCACTGGGGAGACGGAGATGGGG-TCAGAGGCCTGACTGACCGCCTTCCGGGTGCTGCTCAGTCTGGTGATGGCTGCGCCGCTCGG-AAGGCCGGTTTGCACAACCCAGTGCTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAAACTGACAAAGTGCC--AGAGAAACCTG--GGGCCTCCAGCAGCTGCTCGGTG--GC-TCTGGGCAGGCTGCTGGGGGCTGAGCTCT--TCCTGG--------ATGGACTCCGTGCAAAAGGCACGTCTACTTTGGAAAAGACTGAGGAGGGCTTGGGGCCACCCAGTCCCTCTGTGGGGGCTCAGGGTGGGGACGAGACCAGGAACAACCAGAACAC--TGGCCAGCACCAGGCCTGGAGTGGATGAGGAGGTAGAGAACTGACCCAGC---TGGAGCAGGGGTC--------GGGGGTTAGCTGTGGGGT--GTGG---GGGCTG--CTGGCCGTCACCTGGTACTGTGGGCAGGCA-GGCACTGGATGGTCAGCCAGAC-TTTCATTTTACTCAGGCATCTTGGA-----GAG-TGGATGCTC-TGCCTGTCCCAGTGCTGGAAGACACATCTC--AGAGCCCCTCTTTTGTTGCCTGTTCTCTTGCAGAGGCT--------------------------GGCGG---GAGAGTGGAG------------CAGGGTG-CGGCGGGGGACCGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96389235 642 + 96509753 ACCCACACCCCACACCACTC-TGCACTGGGGAGAC------GGGG-TCAGAGGCCTGACCGACCGCCTTCCGGGTGCTGCTCAGTCTGGTGATGGCTGCGCCGCTCGG-AAGGCCGGTTTGCACAACCCAGCGCTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAAACTGACAAAGTGCC--AGAGAAACCTG--GGGCCTCCAGCAGCTGCTCGGTG--GC-TCTGGGCAGGCTGCTGGGGGCTGAGCTCT--TCCTGG--------ATGGACTCCGTGCAAAAGGCACGTCTACTTTGGAAAAGACTGAGGAGGGCTTGGGGCCACCCAGTCCCTCTGTGGGGGCTCAGGGTGGGGACGAGACCAGGAACAACCAGAACAC--TGGCCAGCACCAGGCCTGGAGTGGATGAGGAGGTAGAGAACTGACCCAGC---TGGAGCAGGGGTT--------GGGGGTTAGCTGTGGGGT--GTGG---GGGCTG--CTGGCCGTCACCTGGTACTGTGGGCAGGCA-GGCACTGGATGGTCAGCCAGAC-TTTCATTTTACTCAGGCATCTTGGA-----GAG-TGGATGCTC-TGCCTGTCCCAGTGCTGGAAGACACATCTC--AGAGCCCCTCTTTTGTTGCCTGTTCTCTTGCAGAGGCC--------------------------AGCGG---GAGAGTGGAG------------CAGGGTG-CGGCGGGGGACCCGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16860546 640 - 16982598 ACCCACACCCCACACCACTC-TGCACTGGGGAGAT------GGGG-TCAGAGGCCTGACTGACCGCCTTCCGGGTGCTGCTCAGTCTGGTGATGGCTGCGCCGCTCGG-AAGGCCGGTTTGCACAACCCAGTGCCGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAAACTCACAAAGTGCCAGAGAGAAACCTG--GGGCCTCCAGCAGCTGCTCGGTG--GC-TCTGGGCAGGCTGGTGGGGGCTGAGCTCT--TCCTGG--------ATGGACTCCGTGCAAAAGGCACGTCTACTTTGGAAAAGACTGAGGAGGGCTTGGGGCCACCCAGTCCCTCTGTGGGGGCTCAGGGTGGGGACGAGACCAGGAACAACCAGAACAC--TGGCCAGCACCAGGCCTGGAGTGGATGAGGAGGTAGAGAACTGACCCAGC---TGGAGCAGGGGTC--------GGGGGTTAGCTGTGGGGT--GTGG---GGGCTG--CTGGCCGTCACCTGGTACTGTGGGCAGGCA-GGCACTGGATGGTCAGCCAGAC-TTTCATTTTACTCAGGCATCTTGGA-----GAG-TGGATGCTC-TGCCTGTCCCAGTGCTGGAAGACACATCTC--AGAGCCCCTCTTTTGTTGCCTGTTCTCTTGCAGAGGGC--------------------------GGCGG---GAGAGTGGAG------------CAGGGTG-CGGCGGGGG----GGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3661744 642 - 3785965 A-------CCCACACCACTC-TGCACTGGGGAGAC------GGGG-TCAGAGGCCTGACTAACTGCCTTCCGGGTGCTGCTCAGTCTGGTGATGGCTGCGCCGCTCGG-AAGGCCGGTTTGCACAACCCAGTGCTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAAACTGACAAAGTGCCAGAGAGAAACCTG--GGGCCTCCAGCAGCTGCTCGGTGGCGC-GCTGGGCAGGCTGGTGGGGGCTGAGCTCT--TCCTGG--------ATGGACTCTGTGCAAAAGGCACGTCTACTTTGGAAAAGACTGAGGAGGGCTTGGGGCCACCCAGTCCCTCTGTGGGGGCTCAGGGTGGGGACGAGACCAGGAACAACCAGAACAC--TGGCCAGCACCAGGCCTGGAGTGGATGAGGAGGTAGAGAACTGACCCAGC---TGGAGCAGGGGTC--------GGGGATTAGCTGTGGGGT--GTGG---GGGCTG--CTGGCCGTCACCTGGTACTGTGGGCAGGCA-GGCACTGGATGGTCAGCCAGAC-TTTCATTTTACTCAGGCATCTTGGA-----GAG-TGGATGCTC-TGCCTGTCCCAGTGTTGGAAGACACATCTC--AGAGCCCCTCTTTTGTTGCCTGTTCTCTTGCAGGAGGCTG------------------------GGCGG---GAGAGTGGAG------------CAGGGTGCCTGCGGGGGACCGGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 46852 664 - 179258 A-------CCCACACCACTC-TGCACTGGGGAGAC------GGGG-TCAGAGGCCTGACTAACCGCCTTCCGGGTGCTGCTCAGTCTGGCGATGGCTGCGCCGCTCGG-AAGGCCGGTTTGCACAACCCAGTGCTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAAACTGACAAAGTGCCAGAGAGAAACCTG--GGGCCTCCAGCAGCTGCTCAGTG--GT-GCTGGGCAGGCTGGTGGGGGCTGAGCTCT--TCCTGG--------ATGGACTCCGTGCAAAAGGCACGTCTACTTTGGAAAAGACTGAGGAGGGCTTGGGGCCACCCAGTCCCTCTGTGGGGGCTCAGGGTGGGGACGAGACCAGGAACAACCAGAACAC--TGGCCAGCACCAGGCCTGGAGTGGATGAGGAGGTAGAGAACTGACCCAGC---TGGAGCAGGGGTC--------GGGGATTAGCTGTGGGGT--GTGG---GGGCTG--CTGGCCGTCACCTGGTACTGTGGGCCGGCA-GGCACTGGATGGTCAGCCAGAC-TTTCATTTTACTCAGGCATCTTGGA-----GAG-TGGATGCTC-TGCCTGTCCCAGTGCTGGAAGACACATCTC--AGAGCCCCTCTTTTGTTGCCTATTCTCTTGCAGGAGGCTGGGCGGGAGAGTGGAGCAGGGTGCCGGCGG---GAGAGTGGAG------------CAGGGTGCCTGCGGAGGACCGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5532730 647 - 5823884 A-------CCAGCACCACTC-TGCATTGGGGAGACA-----GGGG-TCAGAGGCCTGACTAACCACCTTCCGGGTGCTGCTCAGTCTGGTGATGGCTGGGCCGCTTGG-AAGGCCAGTTTGCACAACCCAGTGCTGTGCAGAGAGAGCAG--GA-GAGGTTCCTGAAAACTGACAAAGTGCCAGAGAGAAACCTG--GGGCCTCTAGCAGCTGCTTGGTG--GC-GGTGGGCAGGCTGGTGGGGGctgagctct--tcctgg--------atggactccgtgcaaaaggcacgtctactttggaaaagactgagcagggcttggggccacccagtccctctgtcggggctcagggtggggatgagaccaggaacaaccagaacactttggccagcaccaggcctggagtggatgaggaggtagaGGACTGACCCAGC---TGGAGCAGGGGTC--------GGGGGTTAGCTGTGGGGT--GTGG---GGGCTG--CTGGCCGTCACCTGGTACTGTGGGCAGGCA-GGCACTGGATGGTCAGCCAGAC-TTTCATTTTACTCAGGCATCCTGGAGAGTGGAG-TGGATGCTC-TGCCTGTCCCAGTGCTGGAAGACACATCTC--AGAGCCCCTCTTTTGTTGCCTCTTCTCTTGCAGGAAGCTG------------------------GGCGG---GAGAGTGGAG------------CCGGGGC-CTGCGGGGGACTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 14988 614 + 372756 A-------CC--CACCACTC-TGCATTGGGGAGATG-----GGGG-TCAGA-GCCTGACTAACCTCCTTC---CTCCTGCTCAGTCTAGTGATGGCTGGGCCATTTGGAAATGCCAGTT-----------------AGCAGAGAGAGCAG--GA-GAGGTTCCTGAAGACTGACAAAGTGCCAGAGAGCTTCCCG--GGGCCTCCAGCAGCTGCTCAG-G--GT-GATGGGCAGGCTGGTGGAGGCTGAGCTTT--TCCTGG--------ATGGACTCGGTGCAAAAGGCACGTCTACTTTGGAAAAGACTGATCAGGGATTGGGGCCACCCAATCCCTCTGTCAGGACTCAGGGTAGGGATGAGACCAGGAACAACCATAATGCTTTAATCAGCACCGGGCCTGGAGTGGATAAGGAGGTAGAGAACGGAGCCAGCTGGTGGATC-GGGGTC--------AGGGGTTAGCTGTGGGGTGGGTGG---GGGCTG--CTGGCGGTCACCTGAT-CTGCGAGCCGGCAGGGCACTGGACGGTCAGCTAGAC--TTCATGTTACTCAGGCATCTTGGA-----GAG-CAGATGATC-TGCCTGTCCTGATGCTGGAAGAGGCATCTC--AGAGTCCCTCTTTTGTTGCCTCTTCTCTTGCAGAAACCTG------------------------GGCCA---GAGAGA---------------------AACCTGCGGGGAGCTGGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16253324 627 + 16356641 A-------CC--CACCACTC-TGCACTGAGGAGACG-----GGGG-TCAGA-GCCTGACTAACCTCCTTCCTGCTGCTGCTCAGTCTAGTTATGGCCAAGCCATTTGG-AATGCCAGTT-----------------AGCAGAGAGAGCAG--GA-GAGGTTCCTGAAGACTGACAAAGTGCCAGAGAGACGCCCG--GGGCCTCCAGCAGCTGCTCAG-G--GC-GGTGGGCAGGCTGGTGGGGGCTGAGCTTTTCTCCTGG--------ATGGACTCGGTGCAAAAGACATGTCTACTTTGGAAAAGGCTGATCAGGGATTGGGGCCACCCAGTCCCTCTGTCAGGACTCAGGGTGGGGATGAGAGCAGGAACAACCATAACACTTTAATCAGCACCAGGCCTGGAGTGGATAAGGAGGTAGAGAACGGAGCCAGCTGGTGGAGC-GGGGTC--------AGGGGTGAGCTGTGGGATGGGTGG---GGGCTG--CTGGCGGTCACCTGAT-CTGCGAGCCAGCAGGGTACTGGACAGTCAGCCAGAC--TTCATGTTACTCAGGCATCTTGGA-----GAG-TGGATGATC-TGCCTGTCCCGATGCTGCAAGATGCATCTC--AGAGCCCCTCTTTTGTTGCCTGTTCTCTTGCAGAAACCTG------------------------GGCTG---GAGAGAGGAG------------CCGGGAGCCTGTGGGGAGCTGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1121748 583 + 1231380 A-------CC--CACCACTC-TGCACTGGGGAGACA-----GAGG-TCAGA-GCCTGACTAACCTCCTTCCTGCTGCCGCTCAGTCTAGTGATGGCCGAGCCATTTGG-AATGCCGGTT-----------------GGCAGAGAGAGCAG--GA-GAGGTTCCTGAAGACTGACAAAGTGCCAGAGAGATGCCTG--GGGCCTCCAGCAGCTGCCCAG-G--GC-GGTGGGCAGGCTGGTGGGGGCTGAGCTTTTTTCCTGG--------ACGGACTCGGTGCAAAAGGCACGTCTACTTTGGAAAAGACTGATCAGGGATTGGGGCCGCCCAATCCTTCTGTCAGGACTCAGGTTGGGGGTGAGACCAGGAACAACCATGACACTTTAATCAGCACCAGGCCTGCAGTGGATAAGGAGGTAGAGAACGGAGCCAGCTGGTGGATC-GGGGTC--------AGGGGTGAGCCGTGGGGTGGGTGA---GGGCTG--CTGGCGGTTGCCTGAT-CTGTGAGCCGGCAGGGTACTGGACGGTCAGCCAGAC--TTCATGTTACTCAGGCATCTTGGA-----GAG-TGGATGATC-TGCCTGTCCTGATGCTGGAAGATGCATCTC--AGAGCCCCTCTTTTGTTG-----------------------------------------------------------------------------------CCTGCGGGGAGCTGGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2650976 622 + 11732439 A-------CC--CACCACTC-TGCACTGGAGAGACG-----GGGG-TCAGA-GCCTGGTCAACCTCCTTCCTGCTGCTGCTCAGTCTAGTGATGGCCGGGCCATTTGG-AAAGCCAGTT-----------------AGCAGAGAGAGCAG--GA-GAGGTTCCTGAAGACT----AAGTGCCAAAGAGACGCCCG--GGGCCTCCAGCAGCTGCTCAG-G--GCGGGGGGGCAGGCTGGTGGGGGCTGAGCTTT--TCCTGG--------ATGGACTCGGTGCAAAAGGCACATCTACTTTGGAAAAGACTGATCAGGGATTGGGGCCACTCAATCCCTCTGTCAGGGCTCAGGGTGGGGATGAGACCAGGAACAACCGTAACACTTTAATCAGCACCAGGCCTGGAGTGGATAAGGAGGTAGAGAATGGAGCCAGCTGGTGGATC-GGGGTC--------AGGGGTTAGCTGTGGGGTGGGTGG---GGGCTG--CTGGCGGTCACCTGAT-CTGCAAGCCGGCAGGGTACTGGACGGTCAGCCAGAC--TTCATGTTACTCAGGCATCTTGGC-----GAG-TGGATGAGC-TGCCTGTCCTGATGCTGGAAGATACATCTC--AGAGCCCCTCTTTCATTGCCTGTTCTCTTGCAGAAACCTG------------------------GGCCA---AAGAGTGGAG------------CAGGGTGCGGGCGGGGAGCTGGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22812975 576 + 22939663 A-------CTCATATCACCC-TGTGTCTGGGAGATG-----GGGATTCAGA-GCCCAGCTGGCCACCTTCCTGGTGCTGCCCA-CCTGGTGATGGTAGGATGTTTTGA-AATGGTGGTT------------TACTCTGGGCAGAGAGCAG--GATGAGGTGCCTGCAGACTGAC-AAGTGCCAGGGAGATACGCC--GGGTCTCCAGAAGTT--CCAGAA--GC-TGCTTGAAG-----TGGGGGCTGAGTTTC--TCCTGG--------ACAGTCTTGGTGTAAAAAG----GCTACTTTGGAGAAGAGTGAGCCTGGC----------------------------------GTGGAGGTGAAGCCAGGAGCAGCCAGAACACTTTGGTCAGCACTGGGCTTGGAGTGAAC-AGGAGGCAGAG-CCTGGCCCAGCTGGTGGAGCTGAGAGC-------TGGCTATGAGGCTGGGGGTGGGGGGGCTGGGCTG--CTAACAGTCACCTGAT----CAAGCAGGCT-GGTGCTGGATGGCAGGGCAGAC-ACGCACATCATTCAGGCACC----A-----GAG-TGGGTGCTC-TGCCCACCCTGGTGCTGGGGAACTCGACCC--AGAGACCCCTTTTTGTTGACT-TTCTCTTGCAAAAATCTG------------------------GGCAG---G------GAG------------CCAAGTGGGTGCCAGGGTT-GGGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181769520 536 + 182113224 G-------CCAAAGCCAGGC---CCATAGAAAGAC------TGGC-TCAGA-ACCCAGAAGGCCACCTTC-TGGCATAGCCAGACTTAGCAGTGGCTGGACTATTTGG-AATGCTGGTTTGCATGACCCAGCCCTGGAT---GAGTACAATCGA-AAGGAGCCTACAGACTGACAAAGTGCC----AGGAACCTATTAGGCCTCCAATAGCTGCTAACTG--A--AGCAAGCAGATTGTTAGGGATTGAATCCT--TCTTAG--------ATAAACT-AATGTAAAAGGCACCCCTGCTTTGGAAAAATAGGTTC----TTTAGGATAGAGCAATCCTACTACCTGGGCTGGAGGTAAAAGTAGGTTCAGGAGCAGTCAGAATACCTTCGTTAGCATTGGACTCAGAGTGGCATGGGAGAGGGAG---------------TTGAGAAGTGGCA--------GAG-----------------GTGG---CTGCTT--CTGGTGGC--CCTGGC-TCATAGGTACTCTGAACACTGGT-----------AA--------TAACTCCAATATTTTGTG---------------CTC-CA-CTATCCTAACCCTAGAAAAC-CAGGGC--AAAGTCACT-GTTTGTTGGCTTTTCTC-TGTGGATCCCTG------------------------AGCAA---A--------------------------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47580699 457 + 47698779 G-------------------------GGGGGAGGCA-----GGGA----GG-ACCTG--------------------TGCTAACTCTGGT--TGG-----------GG-AATGGAGCTGGGCCAACCACCCGCCTGGGCAATGACAGCAG--GA-CAAGGTTCCTCAGACTGACAACGTGCC--------CCCTG--ATGGCT-------------GGTG--G--GGGGAGGGGGCTGG-GGGCGCTGAGCTCC--TCCTGG--------ATGGACTCCCTGAAAGAGGCATGTCTGC-TGGGTGAAGAGTGAGCAAGGCCTG----------------------------------------------GGAGCCGCCCGGACACCTTGGCCAGC-CCGGGCCTGGAGCGCACTGGGAGGCAG--------------------------GGCC--------GAGGTGTGTCTGCTAGGCAGGCGG---GGATGT--C--GTTGTCACCTGAT-CCG-GGGCAGGCAGGGCACTGGGCAGCCAGTCAGAC-TTGCACGTTACTCCGGCATATTGGA-----AAG-ACAAGCCCCGTGCCTGCGTTGGC-CTGGAAGGCTCATCCC--AGA-TCCCGCTGCGGTTGGCT----------------TTA------------------------GATGG---GGGCCTGGCT------------CGGG-------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 217932 514 - 397369 A-------CCTGTCTTACTCCTACCTGGGGGACGCC-----GGGG-GGGGG-G----------------------------------GGTGAGGACATGGT-GCCCAG-CGTGCGAGCATG-------------TGGGCAGGGGAACCAG--AG-GAGGT-------------------------------------G---------------------G--GC-ACAGGCCGAGCTGCCTAAGGCTGGAGCCC--CCCTCGCCCCCAACACAGTGCCGGTGCTTCAGA-GCATCGCCCCTGGGCAAGGC---GCAAG--TGGGAGCCGAGCAGGGGCCGAGTTGGG-----GGCTGGGGGTGGGGCCAGGAGCGACATGGACACCTT-GCCACCGCCGGACCCGGAGAGGAC-AGGAGG-AGAGGAC------------AGGAGGACGGCTTCCTCGGGAAGAGGCCAGCTGGGGAGGGGGGTG---GCGCTGGCCTGGTGGTTGCCGGGC-C---------------------GTGGCTGCCGAGAC--TGCGCTCTACTCTGGCATCTTGGG-----GAGATGAACGCTC-TGCCAGTGCCAG---------------CTC--CAGACCCCCTTGTTGTTGGCTTTTCTCTT-TAGGAAGCTC------------------------GGCGGCCTGTGGGTGGTGGGCACTGCTCCCCCAGCTGCCCGTAGCCCCTGGAGG i dasNov3.JH569290 I 8 I 13 e proCoq1.NW_012150197v1 1829525 887 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835317 1312 + 57149010 I a score=278408.000000 s hg38.chr20_KI270870v1_alt 76305 36 + 183433 GGCTCTTCTCTTTCTTCCTCTCTCCCATCTTCCTCA s panTro5.chr20 130643 36 - 66533130 GGCTCTTCTCTTTCTTCCTCTCTCCCATCTCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081446 36 + 62195757 GGCTCTTCTCTTTCTTCCTCTCTCCCATCTTCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466655 36 - 578057 GGCTCTTCTCTTTCTTCCTCTCTCCCATCTTCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995463 36 - 110113093 GGGTCTTCTCTTTCTTCCTCTCTCCCATCCTCCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92721897 36 - 92844088 GGATCTTCTCTTTCTTCCTCTCTCCCATCCTCCTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96389877 36 + 96509753 GGGTCTTCTCTTTCTTCCTCTCTCCCATCCTCCTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861186 36 - 16982598 GGGTCTTCTCTTTCTTCCTCTCTCCCATCCTCCTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662386 36 - 3785965 GGGTCTTCTCTCTCTTCCTCTCTCCCATCCTCCTCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47516 36 - 179258 GGGTCTTCTCTCTCTTCCTCTCTCCCATCCTCCTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533377 35 - 5823884 GGG-CTTCTCCTTCTTCCTCTCTCCCATCCGCCTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 15602 33 + 372756 G---CTTTTCTTTCTTCCTCTCTCCCATCCTCCTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16253951 33 + 16356641 G---CTTTTCCTTCCTCCTCTCTCCCAGCCTCCTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122331 33 + 1231380 G---CTTTCCCTTCTTCCTCTCTCTCAGCCTCCTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2651598 32 + 11732439 G---CTTTTCTTTC-TCCTCTCTGCCATCCCCCTCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22813551 36 + 22939663 GTCCCTCCTCTCTCCCCCAACCTTCCTTCCTCTCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181770056 21 + 182113224 ---------------TCCTTTTTTCTTCCCTTCTTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47581156 21 + 47698779 ---------------CCCCTCCCTCCACCCCCCAGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1829525 887 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835317 1312 + 57149010 I e dasNov3.JH569290 218446 13 - 397369 I a score=563081.000000 s hg38.chr20_KI270870v1_alt 76341 52 + 183433 TCTTAGATCCTCCCCCTCTGCATTTTCCGTGTGAACTCCCTCATGAATAAAC s panTro5.chr20 130679 52 - 66533130 TCTTAGATCCTCCCCCTCTGCATTTTCCTTATGAACTCCCTCATGAATAAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081482 52 + 62195757 TCTTAGATCCTCCCCCTCTGCATTTTCCTTGTGAACTCCCTCATGAATAAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466691 52 - 578057 TCTTAGATCCTCCCCCTCTGCATTTTCCTTGTGAACTCCCTCATGAATAAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995499 52 - 110113093 TCTTAGATCCTCCCCCTCTCCATTTTCCTTGTGAACTCACTCATGAATAAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92721933 52 - 92844088 TCTTAGATCCTCCCCCTCTGCATTTTCCTTGTGAACTCACTCATGAATAAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96389913 52 + 96509753 TCTTAGATCCTCCCCCTCTGCATTTTCCTTGTGAACTCACTCATGAATAAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861222 52 - 16982598 TCTTAGATCCTCCCCCTCTGCATTTTCCTTGTGAACTCACTCATGAATAAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662422 52 - 3785965 TCTTAGATCCTCCCCCTCTGCATTTTCCTTGTGAACTCACTCATGAATAAAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47552 52 - 179258 TCTTAGATCCTCCCCCTCTGCATTTTCCTTGTGAACTCACTCATGAATAAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533412 52 - 5823884 TCTTAGATCCTCCCCCTCTGCGTTTTCCTTGTGAACTCACTCATGAATAAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 15635 52 + 372756 TCTTAGATCCTCCCCCTCTGCCTTTACCTTGTGAACTCACTCATGAATAAAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16253984 52 + 16356641 TCTTAGGTCCTCCCGCTCTGCTTTTACCTTGTGAACTCACTCATGAATAAAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122364 51 + 1231380 TCTTAGATCCTCCC-CTCTGCTTTTACCTTGTGAACTCACTCATGAATAAAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2651630 52 + 11732439 TCTTAGATCCTCCACCTCTGCTTTTACCTTGTGAACTCACTCATGAATAAAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22813587 42 + 22939663 TCCCAAGTCCTCCCC--------TCTTTCTGTGAACTCACTTGGGAATAA-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181770077 48 + 182113224 TCTTAGG-ACTGCCTGTCTGCGTTT--CCTGTGCACTTAAAATTGAGTAAT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47581177 52 + 47698779 TTCTAGACCCTCCCTCTCTGCTCTTTCCTTGCAAACTCACTCATGAATAAAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218459 52 - 397369 GCTGGGACCCTCACTGCCACGCTCTTTCCTGAGACCTTGCTCATGACCAAAC i dasNov3.JH569290 I 13 C 0 e proCoq1.NW_012150197v1 1829525 887 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835317 1312 + 57149010 I a score=1103653.000000 s hg38.chr20_KI270870v1_alt 76393 86 + 183433 CAGAAGTTAGTTGTCTACAGATGTAATTTTAACAGGAA-TGTTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATCA s panTro5.chr20 130731 86 - 66533130 CAGAAGTTAGTTGTCTACAGATGTAATTTTAACAGGAA-TGTTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081534 86 + 62195757 CAGAAGTTAGTTGTCTACAGATGTAATTTTAACAGGAA-TGTTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466743 86 - 578057 CAGAAGTTAGTTGTCTACAGATGTAATTTTAACAGGAA-TGTTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995551 86 - 110113093 CAAAAGTTAGTTGTCTATGGACGTAATTTTAACAGGAA-TGTTGTGGTG-TGAGTTTACGGGAAAATGGTCTTTGGGAACCAGCATCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92721985 85 - 92844088 CAGAAGTTAGTTGTCTAC-GATGTAATTTTAACAGGAA-TTCTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96389965 85 + 96509753 CAGAAGTTAGTTGTCTAC-GATGTAATTTTAACAGGAA-TTCTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861274 85 - 16982598 CAGAAGTTAGTTGTCTAC-GATGTAATTTTAACAGGAA-TTCTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662474 85 - 3785965 CAGAAGTTAGTTGTCTAC-GATGTAATTTTAACAGGAA-TTTTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47604 85 - 179258 CAGAAGTTAGTTGTCTAC-GATGTAATTTTAACAGGAA-TTTTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533464 85 - 5823884 CAGAAGTTAGTTGTCTAC-GATGTAATTTTAACAGGAA-TTTTGTGGTG-TGAGTTTACAGGAAAATGGTCTTTGGGAACCAGCATCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 15687 86 + 372756 CAGAAGTTAGTTGTCTACAGACATAATTTTAACAGGAA-TTTTGTTGTG-TGAGTTTACTGGAAAATGGTCTTTGGGAACCAGCATCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254036 87 + 16356641 CAGAAGTGAGTTGTCTACAGACGTAATTTTAACAGGAATTTTTGTGGTG-TGAGTTTACCGGAAAATGGTCTTTGGGAACCAGCATCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122415 86 + 1231380 CAGAAGTTAGTTGTCTACAGACATAATTTTAACAGGAA-TTTTGTGGTG-TGAGTTTACCGGAAAATGGTCTTTGGGAACCAGCCTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2651682 86 + 11732439 CAGAAGTTAGTTGTCTACAGACGTAATTTTAACAGGAA-TTTTGTGGTG-TGAGTTTACCGGAAAATGGTCTTTGGGAACCAGCAGCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1830412 86 - 2029793 CAGAAGTTAGTTGTCTGCAAATGTGATTTTAACAGGAA-TTTCGTGGTG-TGTGTTTGCAGGAAGATGGTCTTCGGGAGCCAGCACCA i proCoq1.NW_012150197v1 I 887 C 0 s otoGar3.GL873542 22813629 86 + 22939663 CTGAAGTTACTTGTTTACAAATGTAATTTTAATGGGAA-TTTTGTGGTA-TATTTTTATAGGAAAATGGTCTTTGGGAATCAGTATCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181770125 82 + 182113224 CAAAAGTTCATTGGTTACAGATGTAATTTTAATTGAAA-TTTTGTGGTC-TGAGTTTATAGGGAAGT----TTGAGGGGGCAGCATTA i mm10.chr2 C 0 I 1040 s canFam3.chr24 47581229 66 + 47698779 CAGAATTTG----------GATGTAATTTTAACGGGAA-TTCTGTGATGTTGAGTTTACAGGAAAACCAGCTTTGGG----------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218511 77 - 397369 CAGAAGT---TTGTCTGCAGATGTCATTTTAAGGGGAC-TTTTGTGGCA-TA----TACAGGAAAACGGTCT--GTGCATTGGTATGA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56835317 1312 + 57149010 I a score=596141.000000 s hg38.chr20_KI270870v1_alt 76479 52 + 183433 TTAGATTAGTCAGACCG---AGAAACGCCGTGTTTCCCAGAAGGGAAGAGAGCAG s panTro5.chr20 130817 52 - 66533130 TTAGATTAGTCAGACCG---AGAAACGCCGTGTTTCCCAGAAGGGAAGAGAGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081620 52 + 62195757 TTAGATTAGTCAGACCG---AGAAACGCCGTGTTTCCCAGAAGGGAAGAGAGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466829 52 - 578057 TTAGATTAGTCAGACCG---AGAAACGCCGTGTTTCCCAGAAGGGAAGAGAGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995637 51 - 110113093 TTAGATTAGTCAGACCG---AGAAACGCCGTGTTTCCCAGAAGGG-AGAGAGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722070 52 - 92844088 TTAGATTAGTCAGACGG---AGAAACGCTGTGTTTCCCAGAAGAGAAGAGAGCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390050 52 + 96509753 TTAGATTAGTCAGACGG---AGAAACGCTGTGTTTCCCAGAAGAGAAGAGAGCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861359 52 - 16982598 TTAGATTAGTCAGACGG---AGAAACGCTGTGTTTCCCAGAAGAGAAGAGAGCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662559 52 - 3785965 TTAGATTAGTCAGACGG---AGAAACGCTGTGTTTCCCAGAAGAGAAGAGAGCAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47689 52 - 179258 TTAGATTAGTCAGACGG---AGAAACGCTGTGTTTCCCAGAAGAGAAGAGAGCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533549 52 - 5823884 TTAGATTAGTCAGACGG---AGAAATGCCGTGTTTCCCAGAAGAGAAGAGAGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 15773 52 + 372756 TTAGATTAGTCAGACCC---AGAAACACAGTGTTTCCCAGGAGGGAAGAGAGCGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254123 52 + 16356641 TTAGATTAGTCAGACCC---AGAAATGCAGTGTTTCCCAGGAGGGAAGAAAGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122501 52 + 1231380 TTAGATTCGTCAGACCC---AGAAACGCAGTGTTTCCCAGGAGGGAAGAGAGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2651768 52 + 11732439 TTAGATTAGTCAGACCC---AGAAATGCAGTGTTTCCCAGGAGGGAAGAGAGCAC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1830498 53 - 2029793 CTGGGTTAGTCAGACTG--AAATGATGTCGCGTTTCCTGGAAGGGAAGAGAGCAG i proCoq1.NW_012150197v1 C 0 I 497 s otoGar3.GL873542 22813715 55 + 22939663 TTAGGCTAGTCAGATTGGAAAAAAATGCCATGTTTCCCAGAAGGGAAGAGAACAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47581295 46 + 47698779 --AGATTAGTCAGCCGG---AAAAGTGC--TGCTTCCCAGGAGGG--CTGAGCAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218588 47 - 397369 -----TTAGACCAGCCC---GAAAGCACCGCGTTTCCCAGAAGGAACAGGAGCTG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I e micMur3.chr18 56835317 1312 + 57149010 I a score=68083.000000 s hg38.chr20_KI270870v1_alt 76531 10 + 183433 TGGCTGCCGT s panTro5.chr20 130869 10 - 66533130 TGGCTGCCGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081672 10 + 62195757 TGGCTGCCGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466881 10 - 578057 TGGCTGCCGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995688 10 - 110113093 TGGCCGCTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722122 10 - 92844088 TGGCTGCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390102 10 + 96509753 TGGCTGCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861411 10 - 16982598 TGGCTGCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662611 10 - 3785965 TGGCTGCTGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47741 10 - 179258 TGGCTGCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533601 10 - 5823884 TGGCTGCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 15825 10 + 372756 TGGTCGCTGT i calJac3.chrUn_GL286459 C 0 I 110 s saiBol1.JH378156 16254175 7 + 16356641 TGGCTGC--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122553 10 + 1231380 TGGCTGCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2651820 7 + 11732439 TGACTGC--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22813770 10 + 22939663 CCGCCTCTGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47581341 9 + 47698779 -AGCCCCGGG i canFam3.chr24 C 0 I 1 e proCoq1.NW_012150197v1 1830551 497 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I e micMur3.chr18 56835317 1312 + 57149010 I e dasNov3.JH569290 218635 0 - 397369 C a score=544697.000000 s hg38.chr20_KI270870v1_alt 76541 67 + 183433 GCTGCTCCCCCGTGGGCTTCCTGCTCTTTGGGGACTGCGGGACCCATCCCCGCTCCAGGACAGCCCC--- s panTro5.chr20 130879 67 - 66533130 GCTGCTCCCCCGTGGGCTTCCTGCTCTTTGGGGACTGCGGGACCCATCCCCGCTCCAGGACAGCCCC--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081682 67 + 62195757 GCTGCTCCCCCGTGGGCTTCCTGCTCTCTGGGGACTGCGGGACCCATCCCCGCTCCAGGACAGCCCC--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466891 67 - 578057 GCTGCTCCCCCGTGGGCTTCCTGCTCCTTGGGGACCGCGGGACCCATCCCTGCTCCAGGACAGCCCC--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995698 67 - 110113093 GCTGCTCCCCTGTGGGCTTTCTGCTTCTTGGGGACCACGGGACCCATCCCCACTTCAGGACAGCCCC--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722132 67 - 92844088 GCTGCTCCCCTGTGGGCTTTCTGCTCCTTGGAGACCACGGCACCCACCCCCGCTTCAGGACAACCCC--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390112 67 + 96509753 GCTGCTCCCCTGTGGGCTTTCTGCTCCTTGGAGACCACGGCACCCACCCCCGCTTCAGGACAACCCC--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861421 67 - 16982598 GCTGCTCCCCTGTGGGCTTTCTGCTCCTTGGAGACCACGGCACCCACCCCTGCTTCAGGACAACCCC--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662621 67 - 3785965 GCTGCTCCCCTGTGGGCTTTCTGCTCCTGGGAGACCACGGGACCCACCCCCGCTTCAGGACAACCCC--- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47751 67 - 179258 GCTGCTCCCCTGTGGGCTTTCTGCTCCTTGGAGACCACGGGACCCACCCCCGCTTCAGGACAACCCC--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533611 67 - 5823884 GCTGCTCCCCTGCGGGCTTTCTGCTCCTTGGAGACCACGGGACCCACCCCTGCTTCGGGACAACCCC--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 15945 67 + 372756 gctgctgtgCCGTGGGTTTTCTGCTCCTGGGAGACCATAGAACCCCTCCCTGCTTCAGGACAGCCCC--- i calJac3.chrUn_GL286459 I 110 C 0 s saiBol1.JH378156 16254182 55 + 16356641 ------------TGGGGTTTCTGCTCCTGGAAGACCACAGGACCCATCCCTGCTTCAGGACAGCCCC--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122563 66 + 1231380 GCTGCTCTGCCGTGGGTTTGCTGCTCCTGGGAGAACACAGGA-CCGTCCCTGCTTCAGGACAGCCCC--- i cebCap1.NW_016107870v1 C 0 I 34 s aotNan1.NW_018500483v1 2651827 55 + 11732439 ------------TGGGTTTTCTGCTCCTGGGAGATCACAGGACCCATCCCTGCTTCAGGACAGCCCC--- i aotNan1.NW_018500483v1 C 0 I 30 s otoGar3.GL873542 22813780 60 + 22939663 ------TCTTGGCAGGCTCCCTGTCTCTTGAAGACT-CAGGGCTTGTCCCTTCTTTGAGGTACCCCT--- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47581351 60 + 47698779 CCTGCCCCCCGGAGGGCTTG-TGCCTCCCGGAGACCCCAGGGCCCGTCCTCTCCCCGCCGC--------- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 218635 55 - 397369 -------CTCCAGGGGCTTTCCCCTCCCAGAGACCCCCGGG--------CTGCTCAGGGAGAAGCCCCTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1830551 497 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I e micMur3.chr18 56835317 1312 + 57149010 I a score=145151.000000 s hg38.chr20_KI270870v1_alt 76608 34 + 183433 ACT-GGGG----------AGCCCACTGCCCAGCCC------GGAGTGTCTG s panTro5.chr20 130946 34 - 66533130 ACT-GGGG----------AGCCCACTGCCCAGCCC------GGAGTGTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081749 34 + 62195757 ACT-GGGG----------ACCCCACTGCCCAGCCC------GGAGTGTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466958 35 - 578057 ACTGGGGG----------AGCCCACTGCCCAGCCC------GGAGTGTCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995765 34 - 110113093 AGT-GGGC----------AGCCCACTGCCCAGCGC------AGAGTGTTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722199 36 - 92844088 GCT-GGGGGC--------AGCCCACTGTCCCACCC------AGAGTGTTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390179 36 + 96509753 GCT-GGGGGC--------AGCCCACGGTCCCACCC------AGAGTGTTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861488 36 - 16982598 GCT-GGGGGC--------AGCCCACTGTCCCACCC------AGAGTGTTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662688 36 - 3785965 ACT-GGGGGC--------AGCCCACTGTCCAGCCC------AGAGTGTTTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47818 36 - 179258 ACT-GGGGGC--------AGCCCACTGTCCAGCCC------AGAGTGTTTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533678 36 - 5823884 ACT-GGGGGC--------AGCCCACTGTCCAGCCC------AGAGTGTTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16012 33 + 372756 ---CAGGGGC--------AG-CCACTGCCCAGCCC------AGAACATCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254237 33 + 16356641 ---CAGGGGC--------AG-CCACTGCCCAGTCC------AGAACGTCTG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22813840 34 + 22939663 AAC-AGGGGC--------AGCCCACTGCCTA--CC------TGGGTGTTTG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47581411 20 + 47698779 -----------------------AC--CTCAGCCC------CAGGTCTTTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218690 48 - 397369 ACC-TGGGTCCCCGGCCTTGCCCCTAGCCCAGGCCTACAGAGGAGTTTC-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1830551 497 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I e micMur3.chr18 56835317 1312 + 57149010 I e cebCap1.NW_016107870v1 1122629 34 + 1231380 I e aotNan1.NW_018500483v1 2651882 30 + 11732439 I a score=-23332.000000 s hg38.chr20_KI270870v1_alt 76642 3 + 183433 C--TG s panTro5.chr20 130980 3 - 66533130 C--TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081783 3 + 62195757 C--TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466993 3 - 578057 C--AG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995799 3 - 110113093 C--TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722235 2 - 92844088 C--T- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390215 2 + 96509753 C--T- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861524 2 - 16982598 C--T- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662724 3 - 3785965 C--TG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47854 3 - 179258 C--TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533714 3 - 5823884 C--TG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16045 1 + 372756 C---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254270 1 + 16356641 C---- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2651912 3 + 11732439 CTG-- i aotNan1.NW_018500483v1 I 30 C 0 s otoGar3.GL873542 22813874 3 + 22939663 C--TG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47581431 3 + 47698779 --ATG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218738 3 - 397369 C--TG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1830551 497 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I e micMur3.chr18 56835317 1312 + 57149010 I e cebCap1.NW_016107870v1 1122629 34 + 1231380 I a score=555226.000000 s hg38.chr20_KI270870v1_alt 76645 70 + 183433 GAGGCCTGGGGGGTGGAATGT----------GCTTTCACGGCCTCTTGAG--GTTCCCGGCA-TTTTTCTGTCTTTCA--GACCA--- s panTro5.chr20 130983 70 - 66533130 GAGGCCTGGGGGGTGGAATGT----------GCTTTCACGGCCTCTTGAG--GTTCCCGGCA-TTTTTCTGTCTTTCA--GACAA--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081786 70 + 62195757 GAGGCCTGGGGGGTGGAATGT----------GCTTTCACGGCCTCTTGAG--GTTCCCGGCA-TTTTTCTGTCTTTCA--GACAA--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 466996 69 - 578057 GAGGCCT-GGGGGTAGAATGT----------GCTTTCACGGCCTCTTGAG--GTTCCCGGCA-TTTTTCTGTCTTTCA--GACAA--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995802 69 - 110113093 GAGGCCT-TGGGGTGGAATGT----------GTTTTCATGGCCTCTTGAG--GTTCCCAGCA-TTTTTCTGTCTTTCA--GACAA--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722237 68 - 92844088 GGGGCCT-TGGGG-GGAATGT----------GCTTCCATGGCCTCTTGAG--GTTCCCAGCA-TTTTTCTGTCTTTCA--GACAA--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390217 68 + 96509753 GGGGCCT-TGGGG-GGAATGT----------GCTTCCACGGCCTCTTGAG--GTTCCCAGCA-TTTTTCTGTCTTTCA--GACAA--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861526 68 - 16982598 GGGGCCT-TGGGG-GGAATGT----------GCTTCCATGGCCTCTTGAG--GTTCCCAGCA-TTTTTCTGTCTTTCA--GACAA--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662727 69 - 3785965 GGGGCCT-TGGGGTGGAATGT----------GCTTCCATGGCCTCTTGAG--GTTCCCAGCA-TTTTTCTGTCTTTCA--GACAA--- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47857 69 - 179258 GGGGCCT-TGGGGTGGAATGT----------GCTTCCATGGCCTCTTGAG--GTTCCCAGCA-TTTTTCTGTCTTTCA--GACAA--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533717 69 - 5823884 GGGGCCT-TGGGGTGGAATGT----------GCTTTCATGGCCTCTTGAG--GTTCCCAGGA-TTTTTCTGTCTTTCA--GACAA--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16046 70 + 372756 GGGGCCT-CAGGGTGGGATGT----------GCGTTCATGGCCTCTTGAG--GTTCCCAGCACTTTTTCTGTCTTTCA--GACAA--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254271 70 + 16356641 GGGGCCT-TGGGGTGGGATGT----------GCGTTCATGGCCTCTTGAG--GTTCCCGGCACTTTTTCTGTCTTTCA--GACAA--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122663 70 + 1231380 GGGGCCT-CGGGGTGGGATGT----------GCGTTCATGGCCTCTGGGG--GTTCCCAGCACTTTTTCTGTCTTTCA--GACAA--- i cebCap1.NW_016107870v1 I 34 C 0 s aotNan1.NW_018500483v1 2651915 69 + 11732439 GGGGCCT-CGGGGTGGGACGT----------GCGTTCATGGCCTCTTGAG--GTTCCCAG-ATTTTTTCTGTCTTTCA--GACAA--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22813877 66 + 22939663 -GGGGCT-GAGGGAGGAAAGT----------AGTTTCCTGGCCTCTCGAG--GCTCTCAGCA-TATTTCTGTCTT--A--GAAAG--- i otoGar3.GL873542 C 0 I 2 s canFam3.chr24 47581434 18 + 47698779 ---------------------------------------AACGGCTGGAT--TCTCCCG----------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218741 87 - 397369 GGGGCTT-GGGGACAGAAGGTGCCGCCTGTGGCCTTCGCTGTGTCCTGAGAAGGTCTGGGCATATTTTCTGTCTTTAATGGATGGCTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1830551 497 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I e micMur3.chr18 56835317 1312 + 57149010 I a score=199899.000000 s hg38.chr20_KI270870v1_alt 76715 21 + 183433 AATTTCCCCAAACATCACTTT s panTro5.chr20 131053 21 - 66533130 AATTTCCCCAAACATCACTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081856 21 + 62195757 AATTTCCCCAAACATCACTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467065 21 - 578057 AATTTCCCCAAACATCACTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995871 20 - 110113093 AATTTCCCCAAACGTCAC-TT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722305 21 - 92844088 AATTTCCCCAAACGTCACTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390285 21 + 96509753 AATTTCCCCAAACGTCACTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861594 21 - 16982598 AATTTCCCCAAACGTCACTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662796 21 - 3785965 AATTTCCCCAAACGTCACTTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47926 21 - 179258 AATTTCCCCAAACATCACTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533786 21 - 5823884 AATTTCCCCAAACGTCACTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16116 21 + 372756 AATCTCCCCAAACGCCACTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254341 21 + 16356641 AATTTCCCCAAATGCCACTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122733 21 + 1231380 AATCTCCCTAAACGCCACTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2651984 21 + 11732439 AATCTCCTCAAACGCCACTTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56836629 21 + 57149010 AATTTCCCCAAATGTCCCTTT i micMur3.chr18 I 1312 C 0 s otoGar3.GL873542 22813945 12 + 22939663 AATCT---------TAACTTT i otoGar3.GL873542 I 2 C 0 s canFam3.chr24 47581452 13 + 47698779 AATGTCCCTGAAG-------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218828 19 - 397369 -AGCCGTCCAAATGGCACTT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1830551 497 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I a score=224731.000000 s hg38.chr20_KI270870v1_alt 76736 15 + 183433 AAAAAACTCAAAACA s panTro5.chr20 131074 15 - 66533130 AAAAAACTCAAAACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081877 15 + 62195757 AAAAAACTCAAAACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467086 15 - 578057 TAAAAACTCAAAACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995891 15 - 110113093 AAAAAACTCAAAACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722326 15 - 92844088 AAAAAACTCAAAACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390306 15 + 96509753 AAAAAACTCAAAACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861615 15 - 16982598 AAAAAACTCAAAACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662817 15 - 3785965 AAAAAACTCAAAACA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47947 15 - 179258 AAAAAACTCAAAACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533807 15 - 5823884 AAAAAACTCAAAACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16137 15 + 372756 AAAATACTCAAAACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254362 15 + 16356641 AAAAAACTCAAAACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122754 15 + 1231380 AAAAAACTCAAAACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652005 15 + 11732439 AAAAAACTCAAAACA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56836650 15 + 57149010 AAAAAACTCCAAACA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1831048 15 - 2029793 AAAAAACTCAAAACA i proCoq1.NW_012150197v1 I 497 C 0 s otoGar3.GL873542 22813957 15 + 22939663 AAAAAACTAAAAAca i otoGar3.GL873542 C 0 I 1473 s canFam3.chr24 47581465 14 + 47698779 AAAACACTCCAAAC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218847 12 - 397369 ---AAACTCAAAACA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I a score=236537.000000 s hg38.chr20_KI270870v1_alt 76751 21 + 183433 AAAATGAGCAAGAGGAATTTC- s panTro5.chr20 131089 21 - 66533130 AAAATGAGCAAGAGGAATTTC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081892 21 + 62195757 AAAATGAGCAAGAGGAATTTC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467101 21 - 578057 AAAATGAGCAAGAGGAATTTC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995906 21 - 110113093 AAAATGAGCAAGAGGAATTTC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722341 21 - 92844088 AAAATAAGCCAGAGGAATTTC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390321 21 + 96509753 AAAATAAGCCAGAGGAATTTC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861630 21 - 16982598 AAAATAAGCCAGAGGAATTTC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662832 21 - 3785965 AAAATAAGCCAGAGGAATTTC- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47962 21 - 179258 AAAGTAAGCCAGAGGAATTTC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533822 21 - 5823884 AAAATAAGCCAGAGGAATTTC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16152 21 + 372756 AAAATGAGCAAGAGGAATTTC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254377 21 + 16356641 AAAATGAGCACGAGGAATTTC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122769 21 + 1231380 AAAATGAGCACGAGGAATTTC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652020 21 + 11732439 AAAATGAGCAAGAGGAATTTC- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56836665 21 + 57149010 GAAATGAGTGAGAGGCACTTC- i micMur3.chr18 C 0 I 1 s proCoq1.NW_012150197v1 1831063 21 - 2029793 AAAACGAGTGAGAGGCACTTT- i proCoq1.NW_012150197v1 C 0 I 1 s canFam3.chr24 47581479 21 + 47698779 AGAACGAGAGGGATGTTTTCC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218859 22 - 397369 AAAATGAGGGAGAGGCATTTTC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I e otoGar3.GL873542 22813972 1473 + 22939663 I a score=794694.000000 s hg38.chr20_KI270870v1_alt 76772 61 + 183433 ACCGGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCACGGAGCCAGCTTCAGAGAGAAGAGAT s panTro5.chr20 131110 61 - 66533130 ACCGGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCACGGAGCCAGCGTCAGAGAGAAGAGAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081913 61 + 62195757 ACCGGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCACGGAGCCAGCGTCAGAGAGAAGAGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467122 61 - 578057 ACCGGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCACGGAGCCAGCTTCAGAGAGAAGAGAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995927 61 - 110113093 ACCTGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCACGGAGCCAGCTTCAGAGAGAAGAGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722362 61 - 92844088 ACCTGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCATGGAGCCTGCTTCAGAGAGAAGAGAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390342 61 + 96509753 ACCTGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCATGGAGCCTGCTTCAGAGAGAAGAGAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861651 61 - 16982598 ACCTCAATTAAAATG-TTTTTGA--TCTCAGGCTTCCATGGAGCCTGCTTCAGAGAGAAGAGAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662853 61 - 3785965 ACCTGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCATGGAACCTGCTTCAGAGAGAAGAGAT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 47983 61 - 179258 ACCTGAATTAAAATG-TTTTTGA--TCTCAGACTTCCATGGAACCTGCTTCAGAGAGAAGAGAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533843 61 - 5823884 ACCTGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCATGGAGCCTGCTTCAGAGAGAAGAGAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16173 60 + 372756 ACCTGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCACTGAGCCTGATTCAGAGAGAAT-GAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254398 60 + 16356641 ACCTGAATTAAAATG-TTTTCGA--TCTCAGGCTTCCACTGAGCCTGCTTCAGAGATAAT-GAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122790 60 + 1231380 ACCTGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCACTGAGCCTGCTTCAGAGAGAAT-GAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652041 59 + 11732439 ACCTGAATTAAAATG-TTTTTGA--TCTCAGGCTTCCACTGAGCCTGCTTCAGAGAGAGT--AT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56836687 60 + 57149010 ACCAGAATTAATATG--TTTTGA--TGTCAGGCTTCCACTGAGCCTGCTTCAGAGAGAATAGAT i micMur3.chr18 I 1 C 0 s proCoq1.NW_012150197v1 1831085 60 - 2029793 ACCTGAATTAAGATG--TTTTGA--TCTCAGGCTTCTGCGGAGCCTGCTTCAGAGAGAATAGAT i proCoq1.NW_012150197v1 I 1 I 224 s otoGar3.GL873542 22815445 62 + 22939663 ACCACACCTAAAATATTTTTTGA--TCTTAGGCTTCCATTGAGACTGCATCAGAGAAAGTAGAT i otoGar3.GL873542 I 1473 C 0 s canFam3.chr24 47581500 63 + 47698779 ACCTGACTTGAAATG-CTTTTTAAGTCTCAGACTTCCATCGAGCTCACTTCACAGAGAAGAGAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218881 60 - 397369 ACTTGAATCAAAGTG-TTTTCAA--TCTCAAGCTTCCACTGA-CCTGCTCTAGAGGGAGTGCAT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I a score=236350.000000 s hg38.chr20_KI270870v1_alt 76833 24 + 183433 TAATGGA----TACTTGCAAGTGGAAAG s panTro5.chr20 131171 24 - 66533130 TAATGGA----TACTTGCAAGTGGAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081974 24 + 62195757 TAATGGA----TACTTGCAAGTGGAAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467183 28 - 578057 TAATGGATACTTACTTGCAAGTGGAAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109995988 24 - 110113093 TAATGGA----TACTTGCAAGTGGAAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722423 24 - 92844088 TAATGGA----TACTTGCAGGTGGAAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390403 24 + 96509753 TAATGGA----TACTTGCAAGTGGAAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861712 24 - 16982598 TAATGGA----TACTTGCAAGTGGAAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662914 24 - 3785965 TAATGGA----TACTTGCAAGTGGAAAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48044 24 - 179258 TAATGGA----TACTTGCAAGTGGAAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533904 24 - 5823884 TAATGGA----TACTTGCAAGTGGAAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16233 23 + 372756 TAATAAA----TACCTGCCAGTGG-AAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254458 23 + 16356641 TAATAGA----TACTTGCCAGTGG-AAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122850 23 + 1231380 GAGTAAA----TACTTGCCGGTGG-AAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652100 23 + 11732439 TAATGAG----TACTTGCCAGTGG-GAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56836747 24 + 57149010 TAATACA----TGCTTGCAAGGGGAAAG i micMur3.chr18 C 0 I 1574 s otoGar3.GL873542 22815507 24 + 22939663 TAATAAA----TACTTGGAAATGGAAAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47581563 16 + 47698779 ----TGA----TCCTTGCAATTGG---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218941 24 - 397369 TAGTAAG----TACTTTCAGGTGGAAAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1831145 224 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I a score=299012.000000 s hg38.chr20_KI270870v1_alt 76857 43 + 183433 TGTAGTTTGAAAATGTCTTCCTGTTTCTCTTCAGTGTTACTGG s panTro5.chr20 131195 43 - 66533130 CGTAGTTTGAAAATGTCTTCCTGTTTCTCTTCAGTGTTACTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62081998 43 + 62195757 CGTAGTTTGAAAATGTCTTCCTGTTTCTCTTCAGTGTTACTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467211 43 - 578057 CGTAGTTTGAAAATGTCTTCCTGTTTCTCTTCAGTGTTGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996012 43 - 110113093 CGTAGTTTGAAAATGTCTTCCTGTTTCTCTTCAGTGTTACTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722447 43 - 92844088 CAGAGTTTGAAAATGTCTTCCTGTTTATCTTCAGTGTTGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390427 43 + 96509753 CAGAGTTTGAAAATGTCTTCCTGTTTATCTTCAGTGTTGGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861736 43 - 16982598 CAGAGTTTGAAAATGTCTTCCTGTTTATCTTCAGTGTTGGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662938 43 - 3785965 CATAGTTTGAAAATGTCTTCCTGTTTATCTTCAGTGTTGGAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48068 43 - 179258 CATAGTTTGAAAATGTCTTCCTGTTTATCTTCAGTGTTGGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533928 43 - 5823884 CATAGTTTGAAAATGTCTTCCTGTTTATCTTCAGCATTGGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16256 42 + 372756 TGTAGATTGGAAATGTCTCCCTTTTTATCTTCAGTGTTGA-GG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254481 42 + 16356641 TGTAGTTTGGAAACGTCTCCCTTTTTATCTTCGGTGTTGA-GG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122873 39 + 1231380 TGT---TTGGAAATGTCTCCCTTTTCATCTTCAGTGTTGA-GG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652123 42 + 11732439 TGTAGTTTGGAAATGTCTCCCTTTTTATCTTCAGCGTTGA-GG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22815531 40 + 22939663 CACAATGTGGACATGTCTTCCTTTTTATCCTTTATGTACT--- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47581579 12 + 47698779 ----------------TGTCCTTTTTAT--------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 218965 39 - 397369 CGCAG-TTGACAGCGTTTTCCTTCTCGCCTGGCTGGTCGG--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1831145 224 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181770207 1040 + 182113224 I e micMur3.chr18 56836771 1574 + 57149010 I a score=880883.000000 s hg38.chr20_KI270870v1_alt 76900 99 + 183433 -------AACTAACCAGATACAAGTGTGGAGTCTTTTCTCCCCAGGGTTAATGCCATTAGGA--------GCGTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT s panTro5.chr20 131238 99 - 66533130 -------AACCAACCAGATACAAGCGTGGAGTCTTTTCTCCCCACGGTTAATGCCATTAGGA--------GCGTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082041 99 + 62195757 -------AACCAACCAGATACAAGCGTGGAGTCTTTTCTCCCCACGGTTAATGCCATTAGGA--------GCGTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467254 99 - 578057 -------AACCGACCAGATACAAGCGTGGAGTCTTTTCTCCCCACGGTTAATGCCATTAGGA--------GCGTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996055 101 - 110113093 -------AACCAACCTGATACAAGCGTGGAGTCTTTTCTCCCTACGGTTAATGCCATTAGGA--------GCTTTCCGTGTGG---GAAGATTCATTTCACCCATCACTTCATCCTTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722490 97 - 92844088 -------AACCAACCCGATACAAGCGTG--ATCTTTTCTCCCCACGGTTAATGCCATTAGGA--------GCTTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390470 97 + 96509753 -------AACCAGCCCGATACAAGCGTG--ATCTTTTCTCCCCACGGTGAATGCCATTAGGA--------GCTTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861779 97 - 16982598 -------AACCAACCCGATACAAGCGTG--ATCTTTTCTCCCCACGGTTAATGCCATTAGGA--------GCTTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3662981 97 - 3785965 -------AACCAGCCCGATACAAGCGTG--ATCTTTTCTCCCCACGGTTAATGCCATTAGGA--------GCTTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48111 97 - 179258 -------AACCAACCCGATACAAGCGTG--ATCTTTTCTCCCCACGGTTAATGCCATTAGGA--------GCTTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5533971 97 - 5823884 -------AACCAACCCGATACAAGCGTA--GTCTTTTCTCCCCATGGTTAATGCCATTAGGA--------GCTTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16298 97 + 372756 -------AACCAGCCTGATACAAATATG--GTCTCTTCTCCCCACGGGTAATGGCATGAGGC--------ACTTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254523 97 + 16356641 -------AACCAGCCCGATACAAGTGTG--GTCTCTTCTCCCCACGGGTAATGGCATGAGGC--------GCTTTCCTTGTGG---GAAGATTGGTCTCACCCATCACTTCATCC--TT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1122912 97 + 1231380 -------AACCAGCCCGATGCAAGAGTG--GTCTCTTCTCCCTGTGGGTCATGGCATGAGGC--------GCTTTCCTTGTGG---GAAGATTGGTCTTACCTGTCACttcattc--tt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652165 99 + 11732439 -------AACCAGCCCAATACAAGTGTGGAGTCTCTTCTCCCCACGGGTGATGGCACGAGGC--------GCTTTCCTTGTGG---GAAGATTGGTTTCACCCATCACTTCATCC--TT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22815571 108 + 22939663 -------GAGCAACCCAGCA-GAGTCTGGAGCCCTTCCTCCCCTCAGCTAATGCCATTAGGAGCACAAATGCTTTTCTGAGGGTCAGAAGATGAATTTTGCCCATTGCTTCATCT--C- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181771247 103 + 182113224 -------agctCACACAATACAGTTTTA-ACTCACTTCTCCTCTTGGCAAATGCCTTTAGGAGTGAGTGTGCTTTTCTTG------TAAGACCAACTTCATTTATTGCTTCATCC--TT i mm10.chr2 I 1040 C 0 s canFam3.chr24 47581591 94 + 47698779 --------------------CAAGTTTCACGCCTTTCCCGTCACTGGCTCACGCAGTCGGGAGCAAAGGCGCTTTCCTTGCAA---GAGTAGGGGCTTCACCCATTGTTTCATCC--CT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219004 90 - 397369 GTCCCCTGGCCAGCTC----------TGGAGTCTTCTTCCGCCA---GCAGGACAGTGAGGAGCCCAT--GCTTTTCTTGAGA---GAAGAGGGGCTTTGCCCGTCCC----------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1831145 224 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56836771 1574 + 57149010 I a score=178033.000000 s hg38.chr20_KI270870v1_alt 76999 18 + 183433 TTT-------TTTATTTTACAATTT s panTro5.chr20 131337 18 - 66533130 TTT-------TTTATTTTACAATTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082140 18 + 62195757 TTT-------TTTATTTTACAATTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467353 18 - 578057 TTT-------TTTATTTTACAATTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996156 18 - 110113093 TTT-------TTTATTTTACAATTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722587 25 - 92844088 TTTTTAAAATTTTATTTTACAATTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390567 25 + 96509753 TTTTTAAAATTTTATTTTACAATTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861876 25 - 16982598 TTTTAAAAATTTTATTTTACAATTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663078 25 - 3785965 TTTTTAAAATTTTATTTTACAATTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48208 25 - 179258 TTTTTAAAATTTTATTTTACAATTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534068 25 - 5823884 TTTTTTAAAATTTATTTTACAATTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16395 18 + 372756 TTT-------CTCATTTTACAATTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254620 18 + 16356641 TTC-------TTCATTTCACAATTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123009 18 + 1231380 ttt-------ttcatttcacaattt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652264 18 + 11732439 TTT-------TTCATTTTACAATTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1831369 18 - 2029793 TTT-------TTTATTTTCAAATTT i proCoq1.NW_012150197v1 I 224 C 0 s otoGar3.GL873542 22815679 18 + 22939663 CTT-------TTCATTTTCAAAttt i otoGar3.GL873542 C 0 I 3262 s mm10.chr2 181771350 9 + 182113224 ----------TTTTTTTTC------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47581685 17 + 47698779 -CT-------TTCCTTTCAAAATTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219094 18 - 397369 TTT-------TTCACTTTAAAATTT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56836771 1574 + 57149010 I a score=145011.000000 s hg38.chr20_KI270870v1_alt 77017 20 + 183433 GCACTT---AA-------AAA------TGC-AATGTT s panTro5.chr20 131355 20 - 66533130 GCACTT---AA-------AAA------TGC-AATGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082158 20 + 62195757 GCACTT---AA-------AAA------TGC-AATGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467371 20 - 578057 GCACTT---AA-------AAA------TGC-AATGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996174 21 - 110113093 GCACTT--AAA-------AAA------TGC-AATGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722612 21 - 92844088 GTACTT--AAA-------AAT------TGC-AATGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390592 21 + 96509753 GTACTT--AAA-------AAT------TGC-AATGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861901 21 - 16982598 GTACTT--AAA-------AAT------TGC-AATGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663103 21 - 3785965 GCACTT--AAA-------AAG------TGC-AATGTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48233 21 - 179258 GCACTT--AAA-------AAA------TGC-AATGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534093 21 - 5823884 GCACTT--AAA-------AAA------TGC-AATGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16413 29 + 372756 GCACTT--AAAATTTTTTAAG------TGCAAATATT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254638 29 + 16356641 GCACTT--TAAATTTTTTAAG------TGCAAATTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123027 29 + 1231380 gcactt--taaatttttTAAG------TGCAAATTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652282 29 + 11732439 GCACTT--TAAATTTTTTAAG------TGCAAATTTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1831387 20 - 2029793 GCACTT---AA-------AAA------TGC-AATGTT i proCoq1.NW_012150197v1 C 0 I 476 s mm10.chr2 181771359 20 + 182113224 -ATTTT--TAA-------AAA------TTC-AGTGCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47581702 23 + 47698779 GCACTTAAAAA-------AAA------TGC-AGTGTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219112 27 - 397369 GTGCTT--GAA-------AAAAAAACCCAC-AATGTT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56836771 1574 + 57149010 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=227250.000000 s hg38.chr20_KI270870v1_alt 77037 28 + 183433 A----TTTTAATCG---GG---AACGAAAGTAACT--C--AG- s panTro5.chr20 131375 28 - 66533130 A----TTTTAATCG---GG---AACGAAAGTAACT--C--AG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082178 28 + 62195757 A----TTTTAATCG---GG---AACGAAAGTAACT--C--AG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467391 28 - 578057 A----TTTTAATCA---GG---AACGAAAGTAACT--C--AG- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996195 28 - 110113093 A----TTTTAATCG---GG---AACGAAAGTAACT--C--AG- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722633 28 - 92844088 A----TTTTAATCG---GG---AATGAAAGCAACT--C--AG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390613 28 + 96509753 A----TTTTAATCG---GG---AATGAAAGCAACT--C--AG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861922 28 - 16982598 A----TTTTAATCG---GG---AATGAAAGCAACT--C--AG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663124 28 - 3785965 A----TTTTAATCG---GG---AATGAAAGCAACT--C--AG- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48254 28 - 179258 A----TTTTAATCG---GG---AATGAAAGCAACT--C--AG- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534114 28 - 5823884 A----TTTTAATCG---GG---AATGAAAGCAACT--C--AG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16442 34 + 372756 AAGTGTTTTAATTG---GG---AATGAAATTAACT--CAGAG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254667 34 + 16356641 AAGTGTTTTAATTG---GG---AAGGAAAGTAACT--CAGAG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123056 34 + 1231380 AAGTGTTTTAATCG---GG---AATGAAAGTAACT--CAGAG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652311 34 + 11732439 AAGTGTTTTAATTG---GG---AATGAAAGTAACT--CAGAG- i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181771379 31 + 182113224 A----CTTTAAAAA---GAAATAATGACTATAACT--C--AG- i mm10.chr2 C 0 I 864 s canFam3.chr24 47581725 30 + 47698779 A----TTTCAATCAAACGG---AATGAAAAGAACT--C--A-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219139 34 - 397369 A----TTTTGATCAGATGA---AGGGAAAGTAAATGAC--AGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1831407 476 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56836771 1574 + 57149010 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=1656689.000000 s hg38.chr20_KI270870v1_alt 77065 199 + 183433 CGTGCTTTAATCTGCCCT------GGCTG--AGTACATCTGCCTTGGCCAGGATTGGAGTCCAGGCCTTGCAGAGGAGAGAGGATGTCGACACAGCTGTGGGTGTCTGTGGTCCTCCTGCCACCCCTTGTCCTGCAGCACCGGAAGCCTCCACTCAGCAGCCCCAACCTTCAAGAGAGTGACTTTGTGCTCTGGCAACTGAGTGTGT s panTro5.chr20 131403 199 - 66533130 CGTGCTTTAATCTGCCCT------GGCTG--AGTACATCTGCCTTGGCCAGGATTGGAGTCCAGGCCTTGCAGAGGAGAGAGGATGTCGACACAGCTGTGGGTGTCTGTGGTCCTCCTGCCACCCCTTGTCCTGCAGCACCGGAAGCCTCCACTCAGCAGCCCCAACCTTCAAGAGAGTGACTTTGTGCTCTGGCAACTGAGTGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082206 199 + 62195757 CGTGCTTTAATCTGCCCT------GGCTG--AGTACATCTGCCTTGGCCAGGATTGGAGTCCAGGCCTTGCAGAGGAGAGAGGATGTCGACACAGCTGTGGGTGTCTGTGGTCCTCCTGCCACCCCTTGTCCTGCAGCACCGGAAGCCTCCACTCAGCAGCCCCAACCTTCAAGAGAGTGACTTTGTGCTCTGGCAACTGAGTGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467419 198 - 578057 CGTGCTTTAATCTGCCCT------GGCTG--AGTAC-TCTGCCTTGGCCAGGATTGGAGTCCAGGCCTTGCAGGGGAGAGAGGATGTCGACACAGCTGTGGGTGTCTGTGGTCCTCCTGCCACCCCTTGTCCTGCAGCACCGGAAGCCTCCACTCAGCAGCCCCAACCTTCAAGAGAGTGACTTTGTGCTCTGGCAACTGAGTGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996223 199 - 110113093 CATGCTTTAATCTGCCCT------GGCTG--AGTACATCTGCCTTGGCCAGGATTGGAGTCCAGGCCTTGCAGAGGAGAGAGGATGTCGACACAGCTGTGGGTGTCTGTGGTCTTCCTGCCACCCCTCGTCCTGCAGCACCGAAAGCCTCCACTCAGCAGCCTCAATCTTCAAAAGAGTGACTTTGTGTTCTGGCAACTGAGTGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722661 199 - 92844088 GATGCTTTAATCTGCCCT------GGCTG--AGTACATCTGCCTTGGCGAGGATTGGAGTCCAGGCCTTGCAGAGGAGAGAGGATGTCCACACAGCTGTGGGTGTCTGTGGCCCTCCTGCCATCCCTCGTCCTGCAGCACCGGGAGCCTCCACTCAGCAGCCCCAGCCTTCAAGAGGGTGACTTTGTGCTCAGGCAACTGAGTGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390641 199 + 96509753 GATGCTTTAATCTGCCCT------GGCTG--AGTACGTCTGCCTTGGCGAGGATTGGAGTCCAGGCCTTGCAGAGGAGAGAGGATGTCCACACAGCTGTGGGTGTCTGTGGCCCTCCTGCCATCCCTCGTCCTGCAGCACCGGGAGCCTCCACTCAGCAGCCCCAGCCTTCAAGAGGGTGACTTTGTGCTCAGGCAACTGAGTGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16861950 199 - 16982598 GATGCTTTAATCTGCCCT------GGCTG--AGTACATCTGCCTTGGCGAGGATTGGAGTCCAGGCCTTGCAGAGGAGAGAGGATGTCCACACAGCTGTGGGTGTCTGTGGCCCTCCTGCCATCCCTCGTCCTGCAGCACCGGGAGCCTCCACTCAGCAGCCCCAGCCTTCAAGAGGGTGACTTTGTGCTCAGGCAACTGAGTGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663152 199 - 3785965 GATGCTTTAATCTGCCCT------GGCTG--AGTACATCTGCCTTGGCGAGGATTGGAGTCCAGGCCTTGCAGAGGAGAGAGGATGTCCACACAGCTGTGGGTGTCTGTGGCCCTCCTGCCATCCCTCGTCCTGCAGCACTGGGAGCCTCCACTCAGCAGCCCCAGCCTTCAAGAGGGTGACTTTGTGCTCAGGCAACTGAGTGTGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48282 199 - 179258 GATGCTTTAATCTGCCCT------GGCTG--AGTACATCTGCCTTGGTGAGGATTGGAGTCCAGGCCTTGCAGAGGAGAGAGGATGTCCACACAGCTGTGGGTGTCTGTGGCCCTCCTGCCATCCCTCGTCCTGCAGCACCGGGAGCCTCCACTCAGCAGCCCCAGCCTTCAAGAGGGTGACTTTGTGCTCAGGCAACTGAGTGTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534142 199 - 5823884 GATGCTTTAATCTGCCCT------GGCTG--AGTACATCTGCCTTGGCGAGGATTGGAGTCCAGGCCTTGCAGAGGGGAGAGGATGTCCCCACAGCTATGGGTGTCTGTGGCCCTCCTGCCATCCCTCGTCCTGCAGCACCGGGAGCCTCCACTCAGCAGCCCCAGCCTTCAAGAGGGTGACTTTGTGCTCAGGCAACTGAGTGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16476 198 + 372756 GATGCTTTAATCTGCCCT------GGCTG--AGCACATCTGCCTTGGCTAGGATTAGCAATCAGGCCTTGCAGAGGAGTGAGGTTGTTGACACAGGTGTGGGTGTCTGTGGCCCTACTCCCATCCCTCGTCCTGCAGCACCAGAAGCCTCTACTCAGCAGCCCTA-CCTTCAAGAGGGTGACTGTGTGCTCAGGCTACCGAATGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254701 198 + 16356641 GATGCTTTAATCTGCTCA------GGCCA--AGCACATCTGCCGTGGCCAGGATTAGCGTTCAGGCCTTGCAGAGGAGAGAGGCTGTCGACACAGGCGTGGGTGTCTGTGGCCCTACTCCCATCCCTCGCCCTGCAGCAGCAGAAGCCTCTACTCGGCAGCCCTG-CCTTCAAGAGGGTGACTGTGTGCTCAGGCAACGGAATGTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123090 197 + 1231380 GATGCTTTAATCTGCCCT------AGCTG--AGCACATCTGCCCTGGCCAGGATTAGCGTTCAGGCCTTGCAGAGGAGAGAGGTTGTCGATACAGGTGTGGGTGTCTGTGGCCCTACTCCCATCCCATGTCCTGT-GCAGCAGAAGCCTCTACTCAGCAGCCCTA-CCTTCGAGAGGGTGACTGTGTGCTCAGGCAACGGAATGTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652345 191 + 11732439 GGTGCTTTAATCTGCCCT------AGCTG--AGCATATCTGCCTTGGCCAGGATTAGTGTTCAGGCCTTGCAGAGGAGAGAGGTTGTCGACACC--TGTGG-----TGTGGCCCGACTCCCAACCCTCGTCCTGCAGCACCAGAAGCCTCTACTCAGCGGCCCTA-CCTTCGAGAGGGTGACTGTGTGCTCAAGCAACTGAATGTGT i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47581755 107 + 47698779 ---GTTCCAATCCTCGGT------CGTTG-----------------------------GCCCAGGGCTTG-------GAGAGGTCGCCAA-GCAGTGACGGGTGTCCCAGGCCCTCCGGTCG--------------------------------------------CCTTCAGAGGA----------GCCCTGGGAATGGGAAGGGG i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 219173 168 - 397369 GAAGGTCTAATGTGCCCTGAGGAAGGCTGCCAGGGCGTCTGCGACAGCTATGGTTGGCAT--------------GGAGAGGGAGCGAGCTTTCAAAGGGGGATGCCTGTGGTCTCCC---CACCCCTCACCTTGCAGC--------CCCCACCTCACGAGCACGAGTCTCCACGTGCGTG----------CAGGTGGTGGGGG---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1831407 476 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56836771 1574 + 57149010 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=247395.000000 s hg38.chr20_KI270870v1_alt 77264 25 + 183433 GGTTTGCC-CTGGGGTTGCTTGGAGT s panTro5.chr20 131602 25 - 66533130 GGTTTGCC-CTGGGGTTGCTTGGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082405 25 + 62195757 GGTTTGCC-CTGGGGTTGCTTGGAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467617 25 - 578057 GGTTTGCC-CTGGAGTTGCTTGGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996422 25 - 110113093 AGTTTGCC-CTGGAGTTGCTTGGAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722860 25 - 92844088 GGTTTGTC-GTGGAGTTGCTCGGAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390840 25 + 96509753 GGTTTGTC-GTGGAGTTGCTCGGAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862149 25 - 16982598 GGTTTGTC-GTGGAGTTGCTCGGAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663351 25 - 3785965 GGTTTGTC-CTGGAGTTGCTCGGAGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48481 25 - 179258 GGTTTGTC-CTGGAGTTGCTCGGAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534341 25 - 5823884 GGTTTGTC-CTGGAGTTGCTCGGAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16674 25 + 372756 GGTTTTCC-CTGGAGTTGCATGGAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254899 25 + 16356641 GGTTTGCC-CTGGAGTTGCGTGAAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123287 25 + 1231380 GGTTTGCC-CTGGAGTTGAGTGCAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652536 25 + 11732439 GGTTTGCC-CTGGAGTTGCGTGGAGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1831883 25 - 2029793 GGTTTGCC-CTGGGGCTGCTTGGAGT i proCoq1.NW_012150197v1 I 476 I 196 s canFam3.chr24 47581864 26 + 47698779 GGTTTGCCGCTGGGGTCGCTTGGAGT i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 219341 14 - 397369 GCGTTGGC-CTGCGA----------- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56836771 1574 + 57149010 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=1553125.000000 s hg38.chr20_KI270870v1_alt 77289 181 + 183433 TGATTGGATATGTTCCCTGTGCCTTGGGGTTTATTTGGGACTGTGGCCTGGGA--GCACGGCCTGTG-----CCAGGAGGGTGCAGGTTGGATGGTCCTCAGGA---AGTAGGCTGCAGCGCTCTGCAGGAG----TCAGGGTGGCCAGGCAAGGTGGGGGTGAGCACTGGGGATCTGGATGCTCGGGAGGAAAG s panTro5.chr20 131627 181 - 66533130 TGATTGGATATGTTCGCTGTGCCTTGGGGTTTATTTGGGACTGTGGCCTGGGA--GCACGGCCTGTG-----CCAGGAGGGTGCAGGTTGGACGGTCCTCAGGA---AGTAGGCTGCAGCGCTCTGCAGGAG----TCAGGGTGGCCAGGCAAGGTGGGGGTGAGCACTTGGGATCTGGATGCTCGGGAGGAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082430 181 + 62195757 TGATTGGATATGTTCGCTGTGCCTTGGGGTTTATTTGGGACTGTGGCCTGGGA--GCACGGCCTGTG-----CCAGGAGGGTGCAGGTTGGACGGTCCTCAGGA---AGTAGGCTGCAGCGCTCTGCAGGAG----TCAGGGTGGCCAGGCAAGGTGGGGGTGAGCACTTGGGATCTGGATGCTCGGGAGGAAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467642 181 - 578057 TGATTGGATATGTTCGCTGTGCCTTGGGGTTTATTTGGGACTGTGGCCTGGGA--GCACGGCCTGTG-----CCAGGAGGGTGCAGGTTGGACGGTCCTCAGGA---AGTAGGCTGCAGCGCTCTGCATGAG----TCCGGGTGGCCAGGCAAGCTGGGGGTGAGCACTTAGGATCTGAATGCTCGGGAGGAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996447 181 - 110113093 TGATTGGATACGTTTGCTGTGCCTTGGGGTTTATTTGGGACTGTGGCCTGGGA--GCATGGCCTGTG-----CCAGGAGGGTGCAGGTTGGACGGTCCTCAGGA---AGTAGGCTGCAGCACTCTGCATGAG----TCAGGGTGGCCAGGCAAGGTGGGGGTGAGCACTTGGGATCTAGATTCTAGGGAGGAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92722885 180 - 92844088 CGACTGGATATGTTCGCTGTGCCTTGGGGTTTGTTTGGGACCGTGGCCTGGGA--GTATGGCCCGTG-----CCAGGAGGGTGCAGGTTGGACGGTCCTCAGGA---AGTAGGCTGCAGCGCTCGGCATGAG----TCAGGGTGGCCA-GCGAGGTGGGGGTGAGCACTTGGGACCTAGATGCTGGGGAGGAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96390865 180 + 96509753 CGACTGGATACATTCACTGTGCCTTGGGGTTTGTTTGGGACCGTGGCCTGGGA--GTATGGCCCGTG-----CCAGGAGGGTGCAGGTTGGACGGTCCTCAGGA---AGTAGGCTGCAGCGCTCGGCATGAG----TCAGGGTGGCCA-GCAAGGTGGGGGTGAGCACTTGGGACCTAGATGCTGGGGAGGAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862174 180 - 16982598 CGACTGGATACGTTCGCTGTGCCTTGGGGTTTGTTTGGGACCGTGGCCTGGGA--GTATGGCCCGTG-----CCAGGAGGGTGCAGGTTGGATGGTCCTCAGGA---AGTAGGCTGCAGCGCTCGGCATGAG----TCAGGGTGGCCA-GCAAGGTGGGGGTGAGCACTTGGGACCTAGATGCTGGGGAGGAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663376 180 - 3785965 CGACTGGATACGTTCGCTGTGCCTTGGGGTTTGTTTGGGACTGTGGCCTGGGA--GTATGGCCCGTG-----CCAGGAGGGTGCAGGTTGGATGGTCCTCAGGA---AGTAGGCTGCAGCGCTTGGCATGAG----TCAGGGTGGCCA-GCAAGGTGGGGGTGAGCACTTGAGACCTAGATGCTGGGGAGGAAAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48506 180 - 179258 CGACTGGATACGTTCGCTGTGCCTTGGGGTTTGTTTGGGACTGTGGCCTGGGA--GTATGGCCCGTG-----CCAGGAGGGTGCAGGTTGGACGGTCCTCAGGA---AGTAGGCTGCAGCGCTCGGCATGAG----TCAGGGTGGCCA-GCAAGGTGGGGGTGAGCACTTGGGACCTAGATGCTGGGGAGGAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534366 181 - 5823884 CCATTGGATACGTTCACTGTGCGTTGGGGTTTGTTTGGGACCGTGGCCTGGGA--GTGTGGCCCGTG-----CCAGGAGGGTGCAGGGTGGACGGTCCTCAGGA---AGTAGGCTGCAGCGCTCTGCATGAG----TCAGGGTGGCCAGGCAAGGTGGGGGTGAGCACTTGGGACCTAGATGCCGGGGAGGAAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16699 180 + 372756 TG-TAGGATATGTTTGCTGTGCCTCAGGGTTTATTTCGGACTGTGGCCGGGGA--GCATGGCCTGTA-----CCAGGAAGGTGCAGGTGGGGTAGCCCTCAGGA---AGTAGGCTGCAGCACTCTGCATATG----TCAGAGTGACCAGGCAAGGTGGGGGTGAGCACTTGGGATGTAGACGCTGGGGAGGAAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16254924 180 + 16356641 TG-TAGGATACGTTTGCTGTGCCTCGGGGTTTCTTTGGGACTGTGGCCGGGGA--GCATGGCCTGTG-----CCAGGAAGGTGCAGGTGGGGCAGCCCTCAGGA---AGTAGGCCGCAGTGCTCTGCGTGAG----TCAGGGTGACCAGGCAAGGTGGGGGCGAGCACTTGGGATCTAGACGCTGGGGAGGAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123312 180 + 1231380 TG-TAGGATACGTTTGCTGTGCCTCGGGGTTTCTTTGGGACTGTGGCCGGGGA--GCATGGCTTGTG-----CCAGGAAGGTGTAGGTGGGGCAGCCCTCAGGA---AGTAGGCTGCAGTGCTCTGCATGAG----TCAGGGTGACCAGGCAAGGTGGGGGTGAGCACTTGGGATCTAGACGCTGGGGAGGAAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652561 180 + 11732439 TG-TAGGATACGTTTGCTGTGCCTCGGGGTTTATCAGGGACTGTGGCGGGGTA--GCATGGCCTGTG-----CCAGGAAGGTGCAGGTGGGGCAGCCCTCAGGA---AGTAGGCTGCAGTGCTCTGCATGAG----TCAGGGTGACCAGGCAAGGTGGGGGTGAGCACTTGGGATCTAGACGCTGGGGAGGAAAA i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47581890 154 + 47698779 ----------------TGGTGACCCGGGGGT----------CGTGGCC-GGGA--GCAGGGCCAGCG-----CGGCGGGTGTGCACGGCGCA-GGCCCTCCAAG---GGCTGGCTGCC-CGGTCTTCCCGGGTCCCTCAGGGTGGTGG-GCAAGGTGCGAAAGTGTGCGTGTGATCTGGATGGT-GGGAGGAAAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219355 163 - 397369 -----------GGCCAGTGTGC-TGGGGCTTTGTCTGGGGCCACCATCTGGGCCTGAGTGCCCAGTGGCACCTCAGAAGGCAGT------GACAG--CTCAGAAACGAGGAGACCGAAGGGCTCGGCACTGC----CGCTGGTGACAGGGGAAGCT--------GCACATCCGAGCTGGAAGCCTGGGAGGAAAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1831908 196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56836771 1574 + 57149010 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=88530.000000 s hg38.chr20_KI270870v1_alt 77470 8 + 183433 GTGGAGGC-- s panTro5.chr20 131808 8 - 66533130 GTGGAGGC-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082611 8 + 62195757 GTGGAGGC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467823 8 - 578057 GTGGAGCC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996628 8 - 110113093 GTGGAGGC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723065 8 - 92844088 GTGGAGGC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391045 8 + 96509753 GTGGAGGC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862354 8 - 16982598 GTGGAGGC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663556 8 - 3785965 GTGGAGGC-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48686 8 - 179258 GTGGAGGC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534547 8 - 5823884 GTGGAGGC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16879 8 + 372756 GTGGAGGC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255104 8 + 16356641 GTGGAGGC-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123492 8 + 1231380 GTGGAGGC-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652741 8 + 11732439 GTGGAGGC-- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1832104 8 - 2029793 GTGGAGGC-- i proCoq1.NW_012150197v1 I 196 C 0 s canFam3.chr24 47582044 8 + 47698779 GCGGACGT-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219518 8 - 397369 --GCAGCCGT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56836771 1574 + 57149010 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=963010.000000 s hg38.chr20_KI270870v1_alt 77478 73 + 183433 ACCATATGGCCTGAGCTGCTGACAGATGAGCCTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- s panTro5.chr20 131816 73 - 66533130 ACCATATGGCCTGAGCTGCTGACAGATGAGCCTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082619 73 + 62195757 ACCATATGGCCTGAGCTGCTGACAGATGAGCCTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467831 73 - 578057 ACCATATGGCCTGAGCCGCTGACAGATGAGCTCGCC-GG--CCCCACCTCTCCCTCACGCCTGGCTTCACACCTCC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996636 73 - 110113093 ACCATATGGCCTGAGCTGCTGACAGATGAGCTTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723073 73 - 92844088 ACCATATGGCCTGAGCTGCTGACAGATGAGCTTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391053 73 + 96509753 ACCATATGGCCTGAGCTGCTGACAGATGAGCTTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862362 73 - 16982598 ACCATATGGCCTGAGCTGCTGACAGATGAGCTTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663564 73 - 3785965 ACCATATGGCCTGAGCTGCTGACAGATGAGCTTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48694 73 - 179258 ACCATATGGCCTGAGCTGCTGACAGATGAGCTTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534555 73 - 5823884 ACCATATGGCCTGAGCTGCTGACAGATGAGCTTGCT-GG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16887 74 + 372756 ACCATATGGCCTGAGCTGCTGACAGATGAGCTTGCTGGG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255112 73 + 16356641 ACCAGATGGCCTGAGCTGC-GACAGACGAGCTTGCTGGG--CCCCACCTCTCTCTCACGCCTGGCTTCACGCCTCC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123500 73 + 1231380 ACCATATGGCCTGAGCTGT-GACAGCTGAGCTTGCTGGG--CCCCACCTCTCTCTCACGCCTGACTTCACACCTCC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652749 74 + 11732439 ACCATATGGCCTGAGCTGCTGACAGATGAGCCTGCTGGG--CCCCACCTCTCTCTCACGCCTGGCTTCACACCTCC- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56838345 72 + 57149010 ACCATCTGGCCGGAGCTGCTGACAGATCAGCTTGCC-GG---CCCACCTTGCTCTCACGCCTGGCTTCACACCTCC- i micMur3.chr18 I 1574 C 0 s proCoq1.NW_012150197v1 1832112 72 - 2029793 GCCACATGGCC-GAGCTGCTGACAGATCAGCTTGCT-GG--CCCCACCTCGCTCTCACACCTGGCCTCACACCTCC- i proCoq1.NW_012150197v1 C 0 I 520 s canFam3.chr24 47582052 75 + 47698779 GCCATATGGTCGGAGTTGCTGACAGATTAGCCTGCC-GGGCTCCCACCTCGCCCTCACGCCTGGCTTCACACCTTG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219526 74 - 397369 GCCATATGGCCTCGGCTGCTGGAAATTGGCCGCCCA-GC--TCCCACCTCGCCATCACGCTTGGCTACACACCTGAC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=913559.000000 s hg38.chr20_KI270870v1_alt 77551 83 + 183433 ATCGTGTTCAACACTGGTCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTTC-TTTTTTTCCATTTTGCTGCCTGCAATCCA s panTro5.chr20 131889 84 - 66533130 ATCGTGTTCAACACTGGTCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTTCTTTTTTTTCCATTTTGCCGCCTGCAATCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082692 84 + 62195757 ATCATGTTCAACACTGGTCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTTCTTTTTTTTCCATTTTGCCGCCTGCAATCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467904 83 - 578057 ATCGTGTTCAACACCGGGCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTCC-TTTTTTTCCATTTTGCCGCCTGCAATCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996709 84 - 110113093 ATCGTGTTCAACACTGGTCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTTCTTTTTTTCCCATTTTGCCGCTTGCAATCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723146 84 - 92844088 ATCGTGTTCCACAGTGGTCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTTCTTTTTTTCCCATTTTGCTGCCTGCGATCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391126 84 + 96509753 ATCGTGTTCCACAGTGGTCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTTCTTTTTTTCCCATTTTGCTGCCTGCGATCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862435 84 - 16982598 ATCGTGTTCCACAGTGGTCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTTCTTTTTTTCCCATTTTGCTGCCTGCGATCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663637 84 - 3785965 ATCGTGTTCAACAGTGGTCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTTCTTTTTTTCCCATTTTGCTGCCTGCAATCCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48767 84 - 179258 ATCGTGTTCAACAGTGGTCTGAGGGCTGGGGCAGAAGCCATCTGGGTCCTCTTCTTTTTTTCCCATTTTGCTGCCTGCAATCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534628 84 - 5823884 ATCGTGTTCAGCAGTGGTCTGAGGGCTGGGGCAGGAGCCATCTGGGTCCTCTGCTTTTTTTCCCATTTTGCTGCCTGCAGTCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 16961 83 + 372756 ATCGTGTTCAACATTGGTCTGAGGGCTCGGGCAGCAGCCATCTGGGTCCTCTTC-TTTTTTCCCATTTTGCTGCCTGCAATCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255185 83 + 16356641 GTCGTGTTCAGCACTGGTCTAAGGGCTTGGGCAGCAGCCATCTGGGTCCTCTTC-TTTTTTCTCATTTTGCTGCCTGCAATCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123573 83 + 1231380 ATCGTGTTCAACATTGGTCTGAGGGCTCGGGCAGCAGCCATCTGGGTCCTCTTC-TTTTTTCCCATTTTGCTGCCTGCAATCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652823 83 + 11732439 ATCGTGTTCAACATTGGTCTGAGGGCTCGGGCAGCAGCCATCTGGGTCCTCTTC-TTTTTTCCCATTTTGCTGCCTGCAATCCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56838417 81 + 57149010 GCTGCATCCAACACTGGTCTGAGGGCT--GGCCACAGCCATCTGGGTCCTCTCC-CTTTTCCCCATTTCGCTGTCTGCAGTCCA i micMur3.chr18 C 0 I 217 s canFam3.chr24 47582127 83 + 47698779 ATCATGTTAGACATCGGTCTGAGGGCGCCGCCAGAAGCCATCTGCGGCCTCTCC-CTTTTTCCCATTTTGTTGCCTAAAAACTA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219600 79 - 397369 ----AGCTTCGCTTGGGGCGGAGGGCTCTGGCAGAAGCCATCTGGGTCTGCTCT-CATTCCCCGATCCTACTGCCTAAAAAACA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=2039123.000000 s hg38.chr20_KI270870v1_alt 77634 265 + 183433 CACATCAGAGGAGGAGCGTGAGAAGAGGGGGC------------------------CCTGGGT---CAAGGCGGTTGG------------------AGCCTC---TCACCTGGTCCTGGGGGA-CCCT-CCATGTCTCC----CTCAGGGACCCACAGAGCTGCCAGTGGCTGACCTG---TCCTGCCTGAGTGGGAGGAGAGTGGGAG---TTTGGATGCTCCATGGTGCACCAAGGCCTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCGCAAACTGACAGCAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC s panTro5.chr20 131973 265 - 66533130 CACATCAGAGGAGGAGCGTGAGAAGAGGAGGC------------------------CCTGGGT---CAAGGCGGTTGG------------------AGCCTC---TCACCTGGTCCTGGGGGA-CCCT-CCATGTCTCC----CTCAGGGACCCACAGAGCTGCCAGTGGCTGACCTG---TCCTGCCTGAGTGGGAGGAGAGTGGGAG---TTTGGATGCTCCATGGTGCACCAAGGCTTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCGCAAACTGACAGCAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62082776 265 + 62195757 CACATCAGAGGAGGAGCGTGAGAAGAGGGGGC------------------------CCTGGGT---CAAGGCGGTTGG------------------AGCCTC---TCACCTGGTCCTGGGGGA-CCCT-CCATGTCTCC----CTCAGGGACCCACAGAGCTGCCAGTGGCTGACCTG---TCCTGCCTGAGTGGGAGGAGAGTGGGAG---TTTGGATGCTCCATGGTGCACCAAGGCTTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCGCAAACTGACAGCAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 467987 265 - 578057 CACATCAGAGGAGGAGCGTGAGAAGAGGGGGC------------------------CCTGGGT---CAAGGCGGTTGG------------------AGCCTC---TCACCTGGTCCTGGGGGA-CCCT-CCATGTCTCC----CTCAGGGACCCACAGAGCTGCCAGTGGCTGACCTG---TCCTGCCTGAGTGGGAGGAGAGTGGGAG---TTTGGATGCTCCATGGTGCACCAAGGCCTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCGCAAACTGACAGCAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109996793 270 - 110113093 CACATCAGAGGAGGAGTGTGAGAAGAGGGGGC------------------------CCTGGGT---CAAGGCGGTTGG------------------AGCCTC---TCACCTGGTCCTGGGGGACCCCT-CCATGTTTCCCTAGCTCAGGGACCCACAGAGCTGCCAGTGGCTGACCTG---CCCTGCCTGAATGCGAGGAGAGTGGGAG---TTTGGATGCTCCATGGTGCACCAGGGCCTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCACAAACTGAGAGCAGCAGGTGCTTGGG-GT--GGCC-----TCCCAGTGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723230 257 - 92844088 CACATCAGAGGAGGGGTGTGAGAAGAGGGGGC------------------------CCTGGGT---CAGGGCGGTTAG------------------AGCCTC---TCACCTTGTCCTGGGGGA-CCCC-CCACATCTCCCCAGCCCAGGGACCCTCAGAGCTGCCAGTGGCTGACCTG---CCCTGCCT-----------GAGCGGGAG---CTTGGAGGCTCCAT-GTGCCCCAGGGCCTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCACAAACTGACAGCAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391210 257 + 96509753 CACATCAGAGGAGGGGTGTGAGAAGAGGGGGC------------------------CCTGGGT---CAGGGCGGTTAG------------------AGCCTC---TCACCTTGTCCTGGGGGA-CCCC-CCACATCTCCCCAGCCCAGGGACCCTCAGAGCTGCCAGTGGCTGACCTG---CCCTGCCT-----------GAGCGGGAG---CTTGGAGGCTCCAT-GTGCCCCAGGGCCTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCACAAACTGACAGCAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862519 257 - 16982598 CACATCAGAGGAGGGGTGTGAGAAGAGGGGGC------------------------CCTGGGT---CAGGGCGGTTAG------------------AGCCTC---TCACCTTGTCCTGGGGGA-CGCC-CCACATCTCCCCAGCCCAGGGACCCTCAGAGCTGCCAGTGGCTGACCTG---CCCTGCCT-----------GAGCGGGAG---CTTGGAGGCTCCAT-GTGCCCCAGGGCCTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCACAAACTGACAGCAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663721 257 - 3785965 CACATCAGAGGAGGGGTGTGAGAAGAGGGGGC------------------------CCTGGGT---CAGGGCGGTTAG------------------AGCCTC---TTACCTTGTCCTGGGGGA-CCCC-CCACATCTCCCCAGCCCAGGGACCCTCAGAGCTGCCAGTGGCTGACCTG---CCCTGCCT-----------GAGCGGGAG---CTTGGAGGCTCCAT-GTGCCCCAGGGCCTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCACAAACTGACAGCAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 48851 256 - 179258 CACATCAGAGGAGGGGTGTGAGAAGAGGGGGC------------------------CCTGGGT---CAGGGCGGTTAG------------------AGCCTC---TTACCTTGTCCTGGGGGA-CCCC-CCACATCTCCCCAGCCCAAGGACCCTCAGAGCTGCCAGTGGCTGACCTG---CCCTGCCT-----------GAGCGGGAG---CTTGGAGGC-CCAT-GTGCCCCAGGGCCTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCAGACCACAAACTGACAGCAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534712 258 - 5823884 CACATCAGAGGAGGGGTGTGCGAAGAGGGGGC------------------------CCTGGGT---CAGGGCGGTTAG------------------AGCCTC---TCACCTGGTCCTGGGGGA-CCCCTCCACGTCTCCCCAGCTCAGGGACCCTCAGAGCGGCCAGTGGCTGACCTA---CCCTGCCT-----------GAGTGGGAG---CTTGGAGGCTCCAT-GTGCCCCAGGGCCTGCTTTAGAAGGCCCTA-GAAGGTCCCTGAGACT----CTCGGACCACAAACTGACAACAGCAGGTGCCTGGG-GT--GGCC-----TCCCAGTGAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 17044 266 + 372756 CACACCAGAAGAGGAGTGTGAGAAGA-GGGGC------------------------CCTGGGT---CAGGGCAGGTGG------------------AGCCTC---TCACCTGGTCCTGGGGGC-CCCT-CCAGGTCTCC-CAGCTCAGGGA-CCACTGAGCTGCCAGTGGCTGACCTG---CCTAGCCTGAGTGGGAGGAGAGCGGGAG---CTTAGGTGCTGCATTATGCTCCAGGGCCTGCTTTAGAAGGCTCTA-GAAGATCCCTGAGACT----CTTGGACAGCAAACTGACAGCAGCAGGTGCCTGGC-GT--AGTC-----TCACAGTGAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255268 266 + 16356641 CACACCAGAGGAGGAGTGTGAGAAGA-CGGGC------------------------CCTGGGT---CAGGGCGGGAGG------------------AGCCTC---TCACCTGGTCCCGGGGGC-CCCT-CCAGGTCTCC-CAACTCAGGGA-CCGCAGAGCTGCCAGTGGCTGACCTG---CCTCGCCTGAGTGGGAGGCGAGCGGGAG---CTTAGGTGCTGCTCTATGCCCCCAGGCCTGCTTTAGAAGGCTCTG-GAAGATCCCTGAGACT----CTCGGACGGCAAACTGACAGCAGCAAGGGCCTGGC-GT--GGTC-----TCACAGTGAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123656 264 + 1231380 CACACCAGAGGAGGAGTGTGAGAAG--GGGGC------------------------CCTGGGT---CCGGGCAGGTGG------------------AGCCTC---TCACCTGGTCCT-GGGGT-CCCT-CCAGGTCTCC-CAGCTCAGGGA-CCACAGAGCTGCCAGTGGCTGACCTG---CCTAGCCTGAGTGGGAGGAGAGTAGGGG---CTTAGGTGCAGCATTATGCCCCAGGGCCTGCTTTAGAAGGCTCTA-GAAGATCCCTGAGACT----CTCGGACGGCAAACTGACAGCAGCAAGTGCCTGGC-GT--GGTC-----TCACAGTGAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2652906 262 + 11732439 CACACCA---GAGGAGTGTGAGAAGA-GGGAC------------------------CCTGGGT---CAGGGCGGGTGG------------------AGCCTC---TCACCTGGTCCTGGGGGC-CTCT-CCAGGTCTCC-CAGCTCAGGGA-CCACAGAGCTGCCAGTGGCTGACCTG---CCTAGCCTGCGTGGGAGGAGAGCGGGAG---CTTAGGTGCTGCATTGTGCCCCAGGGCCTGC-TCAGAAGGCTCTA-GAAGATCACTGAGACT----CTCGGACGGCAAACTGACAGCAGCAAGTGCCTGGC-GT--GGTC-----TCACAGTGAGC i aotNan1.NW_018500483v1 C 0 I 44 s canFam3.chr24 47582210 200 + 47698779 CACATTAGGGGGTTAGCACCAGGGAGAGGGTC------------------------CCCGGAG---CG------------------------------------------------CGGGGGC-CGCT-CTGCGCCTGC----CTGGGAGG-------------------------------------------------GAGCGGATC---TCGGGAGGGCCCCGGACGCCTCTGGTGCCTCTTCGGAGGGTCCTACGGGCGTTGGCGGGGCG----CCCAGTCC-CGGACTGGCAGCAGCTGACGCCTGGGTGTCAGGCCCTGGGTCGCGGTGCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219679 285 - 397369 CACACTGGCAGAGCAACGTGAGCTCGAGGGGCGACCTGCTGCAGCGGCAGCAGCGTCCTGGAGGTACAGGAGTGGTGGGCTTGTGCCGCCCTGCCAAGCTTCTGGTTCCCCAGCCCTGCACAT-GCCT-C--GGTCTTC----CTCGCGCAGACGCGGAGC--CCAGTGCCCAGCACGGACTCCTGTCC------------TGCGGGAGGCCCCTGAGCTCTCCTTGCTGGGTTGGGGGC----TTGGTACACTCTG-G--------TGAAATTGAGCCCCAGACCTCAAACTG-CAGCAGCAGGAGCCTGGG-GT--GGGG-----GT--------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838498 217 + 57149010 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=26152.000000 s hg38.chr20_KI270870v1_alt 77899 4 + 183433 CAGA s panTro5.chr20 132238 4 - 66533130 CAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083041 4 + 62195757 CAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468252 4 - 578057 CAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997063 4 - 110113093 CAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723487 4 - 92844088 CAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391467 4 + 96509753 CAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862776 4 - 16982598 CAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663978 4 - 3785965 CAGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49107 4 - 179258 CAGA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 17310 4 + 372756 CAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255534 4 + 16356641 CAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123920 4 + 1231380 CAGA i cebCap1.NW_016107870v1 C 0 I 27 s canFam3.chr24 47582410 4 + 47698779 GAGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219964 1 - 397369 C--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e colAng1.NW_012114444v1 5534970 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838498 217 + 57149010 I e aotNan1.NW_018500483v1 2653168 44 + 11732439 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=141997.000000 s hg38.chr20_KI270870v1_alt 77903 49 + 183433 GCCA----------------CAGACCCGAGGC--GCGTCCCCAATCCCGGTGTGCGCCTCGCTGAGC s panTro5.chr20 132242 49 - 66533130 CCCA----------------CAGACCCGAGGT--GCGTCCCCAATCCCGGTGTGCGCCTTGCTGAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083045 49 + 62195757 CCCA----------------CAGACCCGAGGT--GCGTCCCCAATCCCGGTGTGCGCCTTGCTGAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468256 65 - 578057 CCCACAGACCCATGGTGGGCCAGACCCGAGGC--GCATCCCCAATCCCTGTGTGCGCCTGGCTGAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997067 65 - 110113093 CCCACAGACCCACGGTGAGCCAGACCCGAGGC--GCGTCCCCAGTCCCTGCGTGCGCCTTGCTGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723491 61 - 92844088 CCCACAAACCCACGGTGAGCCGGTCCCCAGAC--GCGT-CCCAATCCCTGTGTGCACCTTGCTG--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391471 61 + 96509753 CCCACAAACCCACGGTGAGCCGGTCCCCAGAC--GCGT-CCCAATCCCTGTGTGCACCTTGCTG--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862780 61 - 16982598 CCCACAAACCCACGGTGAGCCGGTCCCCAGAC--GCAT-CCCAATCCCTGTGTGCACCTTGCTG--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3663982 61 - 3785965 CCCACAAACCCACGGTGAGCCGGTCCCGAGAC--GCGT-CCCAATCCCTGTGTGCACCTTGCTG--- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49111 61 - 179258 CCCACAAACCCACGGTGAGCCGGTCCCGAGAC--GCGT-CCCAATCCCTGTGTGCACCTTGCTG--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5534970 30 - 5823884 -------------------------------C--GCGT-CCCAATCCCTGTGTGCACCCTGCTG--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 17314 40 + 372756 ------------------------CCCATGGT--GCATCCCCGGTTCCCCTGTGCATCGTGCTGAG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255538 27 + 16356641 ---------------------------------------CCTGACTCCCCTGTGCGTCGTGCTGAG- i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47582414 36 + 47698779 CCCGCAGCTCTGCGGCCTGCCGG------GGT--GCACCCCTGA----------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 219965 42 - 397369 ------------------------CCTGAGGCTTTCTT-CCTCGTCTCCACGTGGGATTTGCTGAGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838498 217 + 57149010 I e cebCap1.NW_016107870v1 1123924 27 + 1231380 I e aotNan1.NW_018500483v1 2653168 44 + 11732439 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=637271.000000 s hg38.chr20_KI270870v1_alt 77952 77 + 183433 TAGCTTGTCAAAGC---GCTTGGGTCTTTACACCTACAGGG--TTTTTGGGTTCTGAAAATCAAATGGCTTTAGCAGTCCTG s panTro5.chr20 132291 77 - 66533130 TAGCTTGTCAAAGC---GCTTGGGTCTTTACACCTACAGGG--TTTCTGGGTTCTGAAAATCAAATGGCTTTAGCAATCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083094 77 + 62195757 TAGCTTGTCAAAGC---GCTTGGGTCTTTACACCTACAGGG--TTTCTGGGTTCTGAAAATCAAATGGCTTTAGCAATCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468321 77 - 578057 TAGCTTGTCAAAGC---GCTTGGGTCTTTACACCTACGGGG--TTTTTGGGTTCTGAAAATCAAATGGCTTTAGCAGTCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997132 78 - 110113093 TAGCTTGTCAAAGC---ACTTGGGTCTTTACACCTACAGGG-TTTTTTGGGTTCTGAAAATCAAATGGCTTTAGCAGTCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723552 80 - 92844088 -AGCTTGTCAAAGCTAGACTTGGGTCTTCACACCTACAGAG-TTTTTTGAATTCTGAAAATCAAATGGCTTTAGCAGTCATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391532 80 + 96509753 -AGCTTGTCAAAGCTAGACTTGGGTCTTCACACCTACAGAG-TTTTTTGAATTCTGAAAATCAAATGGCTTTAGCAGTCATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862841 80 - 16982598 -AGCTTGTCAAAGCTAGACTTGGGTCTTCACACCTACAGAG-TTTTTTGAATTCTGAAAATCAAATGGCTTTAGCAGTCATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664043 80 - 3785965 -AGCTTGTCAAAGCCAGACTTGGGTCTTCACACCTACAGAG-TTTTTTGAATTCTGAAAATCAAAAGGCTTTAGCAGTCATG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49172 80 - 179258 -AGCTTGTCAAAGCCAGACTTGGGTCTTCACACCTACAGAG-TTTTTTGAATTCTGAAAATCAAATGGCTTTAGCAGTCATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535000 80 - 5823884 -AGCTTGTCGAAACTCAACTTGGGTCTTCACACCTACAGAG-CTTTCTGAATTCTGAAAATCAAACAGCTTTAGCAGTCGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 17354 79 + 372756 GAACTTGTCAAAGC---ACTTGGGTTTTTACACCTACAGGGTTTTTTTGAGTTCTGAAAATCAAAAGTCTTTAGCAGTCATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255565 79 + 16356641 TAACTTGTCAAAGC---ACGGGGGTCTTTACACCTACAGGGTTTCTTTGAGTTCTGAAAATCAAAAATCTTTAGCAGTCATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1123951 79 + 1231380 TAACTTGTCAAAGC---ACTTGGGTCTTTACACCAACAGGGTTTTTTTGAGTCCTGAAAATAAAAAATCTTTAGCAGTCATG i cebCap1.NW_016107870v1 I 27 C 0 s aotNan1.NW_018500483v1 2653212 79 + 11732439 TAACTTGTCAAAGC---ACTTGGGTCTTTACACCTACAGGGTTTTTTTGAGTTCTGAAAATCAAAGATCTTTAGCAGTCATG i aotNan1.NW_018500483v1 I 44 C 0 s canFam3.chr24 47582450 73 + 47698779 -----TGTCCGGAC---GCTTCCGTCTCTGCACCCGCGGGG-CTTGCTGCGTTCTGACCGTGCCGTGCCTTCGGCCGTCGAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 220007 74 - 397369 TGACTGGTCACAGC---ACTTAGGTCCATAGGTCTTAA-----CTCGCGAGTTCTGAGAATCAAAGGGTTTTTGGAACCCTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838498 217 + 57149010 I e otoGar3.GL873542 22815697 3262 + 22939663 I a score=644681.000000 s hg38.chr20_KI270870v1_alt 78029 64 + 183433 --CTCTGTGGGCAGCCAAAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTTACAAG----------ACTTAGAGC------ s panTro5.chr20 132368 64 - 66533130 --CTCTGTGGGCAGCCAAAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTTACAAG----------ACTTAGAGC------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083171 64 + 62195757 --CTCTGTGGGCAGCCAAAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTTACAAG----------ACTTAGAGC------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468398 64 - 578057 --CTCTGTGGGCAGCCAAAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTTACAAG----------ACTTAGAGC------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997210 64 - 110113093 --CTCTGTGTGCAGCCAGAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTTACAAG----------ACTTAGAGC------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723632 64 - 92844088 --CTCTGTCGGCAGCCCGAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTCACAAG----------ACTTAGAGC------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391612 64 + 96509753 --CTCTGTCGGCAGCCCAAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTCACAAG----------ACTTAGAGC------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862921 64 - 16982598 --CTCTGTCGGCAGCCCAAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTCACAAG----------ACTTAGAGC------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664123 64 - 3785965 --CTCTGTCGGCAGCCCAAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTCACAAG----------ACTTGGAGC------ i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49252 64 - 179258 --GTCTGTCGGCAGCCCAAGTGGCTCCTAACTGAAGGTGCTGCCCATTCTTCACAAG----------ACTTGGAGC------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535080 62 - 5823884 --CTCTGTCGGCAG-CCAAGTGGCTCCT-ACTGAAGGTGCTGCCCATTCTTCACAAA----------ACTTAGATC------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 17433 64 + 372756 --CTCTGTGGGCAGCCCAAGTGGCTCCTAACTGGAGGTGCTGCCCACTCTTTACAAT----------ACTCAGAGC------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255644 64 + 16356641 --CTCTGTGGGCAGCCCACGTGGCTCCTAACTGGAGGTGCTGCCCCCTCTTTACAGT----------ACTCAGAGC------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124030 63 + 1231380 --CGCTGTGGGCAGCCCCAGTGGCTCCTGACTGGAGATGCTGCCCACTCTTTACA-T----------ACTCAGAGC------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653291 63 + 11732439 --CTCTGT-GGCAGCCCCAGCGGCTCCTGACTGGAGGTGCTGCCCACTCTTTACAAT----------ACCCAGAGC------ i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56838715 64 + 57149010 --CTCTGTGGGCAGCCCGAGCGGTTTCTAACCGAAGGTGCTGCCTCTTCTTTGCTAG----------ACTCAGAGC------ i micMur3.chr18 I 217 I 181 s otoGar3.GL873542 22818959 64 + 22939663 --CTCTGTGGGCAGCCCAAGTGTCTTCTAACTGAAAGTGCTGCCTGTTCTTTGCTGG----------ACTCAGAGC------ i otoGar3.GL873542 I 3262 C 0 s canFam3.chr24 47582523 57 + 47698779 ----CCGCGTG-AGCCCAGGTG--------------AGGCCGCCCGTTCTCCACGGGCCTTCCGTCAACCCAGAGC------ i canFam3.chr24 C 0 I 24 s dasNov3.JH569290 220081 63 - 397369 CTATCCTGGGCCTCCCCCCGTCGTTCCTAACCCAAGGTG---------CTCTGCTAG----------ACCTGGGGGCTCACC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I a score=271218.000000 s hg38.chr20_KI270870v1_alt 78093 31 + 183433 TGGGGGACAAGTTCCCTCTT-------GGCTCTGAGTT s panTro5.chr20 132432 31 - 66533130 TGGGGGACAAGTTCCCTCTT-------GGCTCTGAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083235 31 + 62195757 TGGGGGACAAGTTCCCTCTT-------GGCTCTGAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468462 31 - 578057 TGGGCGACAAGTTCCCTCTT-------GGCTCTGAGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997274 31 - 110113093 TGGGGGACAAGTTCCCTCTC-------GGCTCTGAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723696 31 - 92844088 TGGGGGACAAGCTCCCTCTC-------GGCTCTGACTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391676 31 + 96509753 TGGGGGACAAGCTCCCTCTC-------GGCTCTGACTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16862985 31 - 16982598 TGGGGGACAAGCTCCCTCTC-------GGCTCTGACTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664187 31 - 3785965 TGGGGGACAAGCTCCCTCTC-------GGCTCTGACTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49316 31 - 179258 TGGGGGACAAGCTCCCTCTC-------GGCTCTGACTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535142 31 - 5823884 TGGGGGACAAGTTTCCTCTC-------GGCTCTGACTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 17497 31 + 372756 TGGGGGACAAGTTCCCTCTC-------GGCTCTGAGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255708 30 + 16356641 T-GGGGACAAGTTCCCTCTC-------AGCTCCGAGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124093 30 + 1231380 T-GGGGAGAAGTTCCCTCTC-------GGTTCTGAGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653354 30 + 11732439 T-GGGGGCAAGTTCCCTCTC-------GGCTCTGAGTT i aotNan1.NW_018500483v1 C 0 I 56 s otoGar3.GL873542 22819023 28 + 22939663 --TCAGACATG-GCCCTCTG-------TGCTCTGGTTT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47582604 31 + 47698779 TTGGGGACGCGGGTCCTCGT-------GGCCCTGGGCT i canFam3.chr24 I 24 C 0 s dasNov3.JH569290 220144 38 - 397369 TGTGGTGTAAATCCGTGCTTGTGGGCGGGCTCCAGGCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838779 181 + 57149010 I a score=81802.000000 s hg38.chr20_KI270870v1_alt 78124 7 + 183433 TCCCAGG s panTro5.chr20 132463 7 - 66533130 TCCCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083266 7 + 62195757 TCCCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468493 7 - 578057 TCCCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997305 7 - 110113093 TCCCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723727 7 - 92844088 TCCCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391707 7 + 96509753 TCCCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863016 7 - 16982598 TCCCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664218 7 - 3785965 TCCCAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49347 7 - 179258 TCCCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535173 7 - 5823884 TCCCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 17528 7 + 372756 TCCAAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255738 7 + 16356641 TCCCAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124123 7 + 1231380 TCCCAGG i cebCap1.NW_016107870v1 C 0 I 42 s otoGar3.GL873542 22819051 7 + 22939663 TCCCAGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47582635 7 + 47698779 TCCTGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 220182 7 - 397369 TCCCAGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838779 181 + 57149010 I e aotNan1.NW_018500483v1 2653384 56 + 11732439 I a score=200035.000000 s hg38.chr20_KI270870v1_alt 78131 41 + 183433 ATAACTGCCGTCCCAGGGAGCCCGGG----GATGGTTCAGAGCAG s panTro5.chr20 132470 41 - 66533130 ATAACTGCCATCCCAGGGAGCCTGGA----GATGGTTCAGAGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083273 41 + 62195757 ATAACTGCCATCCCAGGGAGCCTGGA----GATGGTTCAGAGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468500 41 - 578057 ATAACTGCCGTCCCGAGGAGCCCGGG----GATGGTTCAGAGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997312 41 - 110113093 GTATCTGCCGACCCAGGGATCCCAGG----GATGGTTCGAAGCGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723734 41 - 92844088 GTATTTACCGTCCCGGGGATCCCAGG----GATGGTTCAAAGCGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391714 41 + 96509753 GTATTTACCGTCCCGGGGATTCCAGG----GATGGTTCAAAGCGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863023 41 - 16982598 GTATTTACCGTCCCAGGGATCCCAGG----GATGGTTCAAAGCGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664225 41 - 3785965 GTATTTACCGTCCCGGGGATCCCAGG----GATGGTTCAAAGCGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49354 41 - 179258 GTATTTACCGTCCCGGGGATCCCAGG----GATGGTTCAAAGCGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535180 41 - 5823884 GTATCTACCGTCCCGGGGATCCCAGG----GATGGTTCAACGCGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 17535 42 + 372756 -CGTCAGCTGTCCTACGGATCCCAGGTGTGGGTGGTTCAAACC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255745 41 + 16356641 -CGTCATCTGCCCCACGGAT-CCAGGTGCAGGTGGTTCAAACC-- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22819058 45 + 22939663 GGATCCTCTTACCTAAGGACTCCAGACTTGGGTGGTTCAAAATGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47582642 45 + 47698779 GCAGGGACCGCCCTAGGATCTCCCAGGCTGGGTGGTTCAAAGCCA i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 220189 38 - 397369 -GGTCAACAGTCCCGGGGCCGCCAGGCCT-GGTGGTTCAT----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838779 181 + 57149010 I e cebCap1.NW_016107870v1 1124130 42 + 1231380 I e aotNan1.NW_018500483v1 2653384 56 + 11732439 I a score=187008.000000 s hg38.chr20_KI270870v1_alt 78172 29 + 183433 CCT-CCCAGTTA------CTGCTGACTGAATACTTG s panTro5.chr20 132511 29 - 66533130 CCT-CCCAGTTA------CTGCTGACTGAATACTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083314 29 + 62195757 CCT-CCCAGTTA------CTGCTGACTGAATACTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468541 31 - 578057 CCT-CCCAGTTACT----CTGCTGACTGAATACTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997353 29 - 110113093 CCT-CTCAGTTA------CTGCTGACCCAACACTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723775 30 - 92844088 CCTGCCCGGTTA------CTGCTGACCGAACACTTG i rheMac8.chr10 C 0 I 32 s macFas5.chr10 96391755 30 + 96509753 CCTGCCCGGTTA------CTGCTGACCGAACACTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863064 30 - 16982598 CCTGCCCGGTTA------CTGCTGACCGAACACTTG i macNem1.NW_012014244v1 C 0 I 32 s cerAty1.NW_012001373v1 3664266 30 - 3785965 CCTGCCCGGTTA------CTGCTGACCGAACACTTG i cerAty1.NW_012001373v1 C 0 I 32 s manLeu1.NW_012101652v1 49395 30 - 179258 CCTGCCCGGTTA------CTGCTGACCGAACACTTG i manLeu1.NW_012101652v1 C 0 I 32 s colAng1.NW_012114444v1 5535221 30 - 5823884 CCTGCCCAGTTA------CTGCCGACCGAACACTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 17577 29 + 372756 -CTGCCCAGTTG------CTGCCAACTGAACACTTG i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16255786 28 + 16356641 -C-GCCCAGTTG------CTGCCACCGGAACACGTG i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1124172 29 + 1231380 -CTGCCCAGTTG------CTGCCAACTGAACACTTG i cebCap1.NW_016107870v1 I 42 I 1 s otoGar3.GL873542 22819103 35 + 22939663 TCTGCTGAGTTACC-AAGCTGCTAACTTAACAATTG i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47582688 35 + 47698779 -CCGCTCAGTCACGGGAACTGCTAACTGAACAGTTA i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 220227 13 - 397369 ------------------CTGC-----GGGTGCTGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838779 181 + 57149010 I e aotNan1.NW_018500483v1 2653384 56 + 11732439 I a score=28554.000000 s hg38.chr20_KI270870v1_alt 78201 8 + 183433 GTTGTCAG s panTro5.chr20 132540 8 - 66533130 GTTGTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083343 8 + 62195757 GTTGTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468572 8 - 578057 GTTGTCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997382 8 - 110113093 GTTGTCAG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96391785 8 + 96509753 CTCGCCAG i macFas5.chr10 C 0 I 8 s colAng1.NW_012114444v1 5535251 8 - 5823884 CTCGTCAG i colAng1.NW_012114444v1 C 0 I 25 s calJac3.chrUn_GL286459 17607 8 + 372756 TTTGTCAG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16255815 8 + 16356641 TTTGTCAG i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1124202 8 + 1231380 TTTGTCAG i cebCap1.NW_016107870v1 I 1 C 0 s otoGar3.GL873542 22819139 8 + 22939663 TTTGTTAA i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47582723 8 + 47698779 ATTGGCGT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 220240 8 - 397369 ATTTACAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838779 181 + 57149010 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e aotNan1.NW_018500483v1 2653384 56 + 11732439 I e rheMac8.chr10 92723805 32 - 92844088 I a score=6485.000000 s hg38.chr20_KI270870v1_alt 78209 2 + 183433 TC s panTro5.chr20 132548 2 - 66533130 TT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083351 2 + 62195757 TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468580 2 - 578057 TC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997390 2 - 110113093 TT i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17615 2 + 372756 TC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255823 2 + 16356641 TC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124210 2 + 1231380 TC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22819147 2 + 22939663 TC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47582732 2 + 47698779 TT i canFam3.chr24 I 1 I 4 s dasNov3.JH569290 220248 2 - 397369 TT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838779 181 + 57149010 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e aotNan1.NW_018500483v1 2653384 56 + 11732439 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=81279.000000 s hg38.chr20_KI270870v1_alt 78211 27 + 183433 GCTCGTCAGCATGTGGGATTGTGCTCA s panTro5.chr20 132550 27 - 66533130 GCTCGTCAGCATGTGGGATTGTGCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083353 27 + 62195757 GCTCGTCAGCATGTGGGATTGTGCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468582 27 - 578057 GTTCGTCAGCGTGTGGAATTGTGCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997392 27 - 110113093 GTTCGTCAGCACGTGGAATTGTGCTCA i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17617 27 + 372756 ATTCGTCAGCACCTGGAATTGTGCTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255825 27 + 16356641 GTTCGTCAGCACCTGGAATTGTGTTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124212 27 + 1231380 ATTCGTCAGCACCTGGAATTGTGTTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653440 27 + 11732439 GCTCGTCAGCACCTGGAATTCTACTCA i aotNan1.NW_018500483v1 I 56 C 0 s otoGar3.GL873542 22819149 27 + 22939663 ATCAGTTAGCATGTGAAATTGTGTCAT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47582738 27 + 47698779 ATTGTTTTGCACGTGGAGCTGTGCACA i canFam3.chr24 I 4 C 0 s dasNov3.JH569290 220250 10 - 397369 ----TCCCACACAT------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838779 181 + 57149010 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=12175.000000 s hg38.chr20_KI270870v1_alt 78238 4 + 183433 CCCT s panTro5.chr20 132577 4 - 66533130 CCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083380 4 + 62195757 CCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468609 4 - 578057 CCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997419 4 - 110113093 CCCT i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17644 4 + 372756 TTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255852 4 + 16356641 TTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124239 4 + 1231380 TTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653467 4 + 11732439 TTCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22819176 4 + 22939663 TTCT i otoGar3.GL873542 C 0 I 9 s dasNov3.JH569290 220260 2 - 397369 --CT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832184 520 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838779 181 + 57149010 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=56850.000000 s hg38.chr20_KI270870v1_alt 78242 12 + 183433 GCCCTTACCAAA s panTro5.chr20 132581 12 - 66533130 GCCCTTACCGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083384 12 + 62195757 GCCCTTACCAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468613 12 - 578057 GCCCTTACCAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997423 12 - 110113093 GCCATTACCAAA i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17648 12 + 372756 GCCCTCACCGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255856 12 + 16356641 GCCCTTGCCAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124243 12 + 1231380 GCCCTTACCAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653471 12 + 11732439 GCCCTTACCAAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1832704 12 - 2029793 GCCTTTGCCAAA i proCoq1.NW_012150197v1 I 520 C 0 s otoGar3.GL873542 22819189 12 + 22939663 TACCTTATCAAA i otoGar3.GL873542 I 9 C 0 s dasNov3.JH569290 220262 12 - 397369 ACTCTTACCAAA i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56838779 181 + 57149010 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=146651.000000 s hg38.chr20_KI270870v1_alt 78254 30 + 183433 GTTTTGTTTAGGGAAAAACAGAGATTTGAA s panTro5.chr20 132593 30 - 66533130 GTTTTGTTTAGGGAAAAACAGGGATTTGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083396 30 + 62195757 GTTTTGTTTAGGGAAAAACAGGGATTTGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468625 30 - 578057 GTTTTGTTTAGGGAAAAACAGGGATTTGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997435 30 - 110113093 GTTTTGTTTAGGGAAAAACAGGGATTTGAA i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17660 28 + 372756 GTTTTGTTTAGGGAAAAAT--GGATTTGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255868 28 + 16356641 GTTTTGTTTAGGGAAAAAT--GGATTTGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124255 28 + 1231380 ATTTTGTTTAGGGAAAAAT--GCATTTGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653483 28 + 11732439 GTTTCGTTTAGGGAACAAC--AGATTTGAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56838960 30 + 57149010 GTTTTGTTTAGGGAAAAACAGGGACTGGAA i micMur3.chr18 I 181 C 0 s proCoq1.NW_012150197v1 1832716 30 - 2029793 GTTTTGTCTAGGGAAAAACAGGGACTGGAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22819201 28 + 22939663 ATTTTGTTCAGGG--AAACAGAGACTTAAA i otoGar3.GL873542 C 0 I 266 s dasNov3.JH569290 220274 30 - 397369 GTTTTCTTTAGCCAGAAATAGGGACTTGAA i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=227588.000000 s hg38.chr20_KI270870v1_alt 78284 48 + 183433 ATTGGGACGACTTACTATGGTTAA---------------------------------CATTATTTTCATTGAGACTGGGCC- s panTro5.chr20 132623 48 - 66533130 ATTGGGATGACTTACTATGTTTAA---------------------------------CATTATTTTCATTGAGACTGGGCC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083426 48 + 62195757 ATTGGGATGACTTACTATGGTTAA---------------------------------CATTATTTTCATTGAGACTGGGCC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468655 48 - 578057 ATTGGGATGACTTACTATGTTTAA---------------------------------CATTATTTTCATTGAGACTGGGCC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997465 48 - 110113093 ATTGGGACGACTTACGATGTTTAA---------------------------------CATTATTTTCATCGAGACTGGGCC- i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17688 48 + 372756 ATTGGGATGACTTACTATATTTAA---------------------------------CATTATTTTCATTGAGACTGGGCC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255896 48 + 16356641 ATTGGGATGACTTACTGTATTTAA---------------------------------CATTAGTTTCATTGAGACTGGGCC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124283 48 + 1231380 ATTGGGATGACTTACTATATTTAA---------------------------------CATTATTTTCATTGAGACTGGGCC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653511 48 + 11732439 ATTGGGATGACTTACTATATTTAA---------------------------------CATTATTTTCATTTAGACTGGGCC- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56838990 48 + 57149010 ATTGGGAAGGCTTGCCATATTTTA---------------------------------CATTGTTTTCATTGAAACTGGGCC- i micMur3.chr18 C 0 I 1 s proCoq1.NW_012150197v1 1832746 48 - 2029793 ATTGGGAAGGCTTGCTGTATTTAA---------------------------------CGTTATTTTCATTGAGACTGGGCC- i proCoq1.NW_012150197v1 C 0 I 208 s otoGar3.GL873542 22819495 81 + 22939663 aTTGAGAAGGCTTAGtatatttaatattatttaaaaaataaaaaaCCCCAAAAAACCCATTATTTTTATTGGGATTAGGCC- i otoGar3.GL873542 I 266 I 1 s dasNov3.JH569290 220304 41 - 397369 ATTGGGAGGTCTATTTACACTAAC---------------------------------CTGGGCCCTCACT--------GCCC i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=-3760.000000 s hg38.chr20_KI270870v1_alt 78332 2 + 183433 TT- s panTro5.chr20 132671 2 - 66533130 TT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083474 2 + 62195757 TT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468703 2 - 578057 TT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997513 2 - 110113093 TT- i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17736 2 + 372756 TT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255944 2 + 16356641 TT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124331 2 + 1231380 TT- i cebCap1.NW_016107870v1 C 0 I 343 s aotNan1.NW_018500483v1 2653559 2 + 11732439 TT- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56839039 1 + 57149010 T-- i micMur3.chr18 I 1 C 0 s otoGar3.GL873542 22819577 1 + 22939663 T-- i otoGar3.GL873542 I 1 C 0 s dasNov3.JH569290 220345 2 - 397369 -TC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832794 208 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=128727.000000 s hg38.chr20_KI270870v1_alt 78334 51 + 183433 AATCTTCG-AATGGAACAAAAAATCTGACTTAGGTCGTAAGGGGCAGAGAAA s panTro5.chr20 132673 51 - 66533130 AATCTTTG-AATGGAACAAAAAATCTGACTTAGGTCGCAAGGGGCAAAGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083476 51 + 62195757 AATCTTTG-AATGGAACAAAAAATCTGACTTAGGTCGCAAGGGGCAAAGAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468705 52 - 578057 AATCTTTGAAATGGAACAAAAAATCTGACTTAGGTCGCAAGGGGCAAAGAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997515 52 - 110113093 AATCTATGAAATGGAACAAAAAATCTGACTTAGGTCGCAAGGGGCAAAGAAA i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17738 48 + 372756 ----TATGAAATGGAACAATAAATATGACTTAGGTAGCAAGGGGCAAATAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255946 48 + 16356641 ----TAAGAAGTGGAACGAGAAAGATGACGTAGGTCGCAAGGGGCAAAGACA i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2653561 48 + 11732439 ----TATGAAATGGAAGAATAAATATGACTTAGGTCGCAAGGGGCAAATAGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56839040 51 + 57149010 CACCTGT-GAACGGGACCAAAAATATGACTTAGGTTGTGAGGGGCAGATAGG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22819578 52 + 22939663 TATCTATAAAATGAAACCAAAAATATTACTTAGGTTGTGAGGGACAAATAAA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 220347 50 - 397369 -GACTCTCCAATGGAGC-AGACACATCCTCTGGGGAGagagggaccgttcag i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832794 208 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e cebCap1.NW_016107870v1 1124333 343 + 1231380 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=101429.000000 s hg38.chr20_KI270870v1_alt 78385 23 + 183433 CACGTTTGACGCTGTTATTTTAA s panTro5.chr20 132724 23 - 66533130 CACGTTTGACACTGTTATTTTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083527 23 + 62195757 CACGTTTGACACTGTTATTTTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468757 23 - 578057 CACGTTTGACACTGTTATTTTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997567 23 - 110113093 CACGTTTGACACTGTTATTTTAA i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17786 23 + 372756 CACATTTGACAGTGTTATTTTAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16255994 21 + 16356641 CACATTTGACA--GTTATTTTAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124676 23 + 1231380 CACATTTGACACTGTTATTTTAA i cebCap1.NW_016107870v1 I 343 C 0 s aotNan1.NW_018500483v1 2653609 23 + 11732439 CACATTTGACCCTGTTATTTTAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56839091 23 + 57149010 CACATCTGACGCTGTTATTTTAA i micMur3.chr18 C 0 I 672 s otoGar3.GL873542 22819630 23 + 22939663 CACATCTGACATTGCTATTTTAA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 220397 23 - 397369 cacgtttggtgtagctgctgcag i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832794 208 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=415867.000000 s hg38.chr20_KI270870v1_alt 78408 134 + 183433 TCG-----TTGAGACCGT-----GCTAACTTGTTCAGTTCTCATGAA------CGTG-----------------TTCTGTACTGGACACTGAGGCTGGGAGGCAAATTAGCTTCCCAGGTGAGTGGTGTAGCTCGAATCTAAGATCTTTCCAGCACAGCCTCCCTCA s panTro5.chr20 132747 134 - 66533130 TCA-----TTGAGACTGT-----GCTAACTTGTTTAATTCTCATGAA------CGTG-----------------TTCTGTACTGGACACTGAGGCTGGGAGGCAAATTAGCTTCCCAGGTGAGTGGTGTAGCTTGAATCTAAGATCTTTCCAGCACAGCCTCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083550 134 + 62195757 TCA-----TTGAGACTGT-----GCTAACTTGTTTAATTCTCATGAA------CGTG-----------------TTCTGTACTGGACACTGAGGCTGGGAGGCAAATTAGCTTCCCAGGTGAGTGGTGTAGCTTGAATCTAAGATCTTTCCAGCACAGCCTCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468780 133 - 578057 TCA-----TTGAGACTGT-----GCTAACTTGTTTAATTCTCATGAA------CGTG-----------------TTCTGTACTGGACACTGAGGCTGGGAGGCAAATTAGCTTCCCAGGTGAGTGGTGTAGCTCGAATCT-AGATCTTTCCAGAACAGCCTCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997590 134 - 110113093 TCA-----TTGAGACTGT-----GCTAACTTGTTTAATTCTCATGAA------TGTG-----------------TTCTGTGCTGGACACTGAGGCTGGGAGGCAAATTAGCTTCCCAGGTGAGTGGTGTAGCTGGAATCTGAGATCTTTCCAGAACAGCCTCCCTCA i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17809 134 + 372756 TCA-----TTGGGACTGT-----GCTAACTCGTTTAATTCTCGTTAA------TGTG-----------------TTCTGTGCTGGACACTGAGGCTGGGAGGCAAATTAGCTTCCCAGGTGAGTGGTGTAGCTCGAATCTGAACTGTTTCCAGGACAGCCCCCGTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256015 134 + 16356641 TCA-----TCGGGACTGC-----GGTAACGCGTTTAATTCTCGTTAA------TGCG-----------------TTCCGTGCTGGACACTGAGGCTGGGAGGCAAATTAGCTTCCCAGGTGAGTGGTGTAGCTCGAATCTGAACTGTTTCCAGGACAGCCCCCGTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124699 132 + 1231380 TCA-----TTTGGACTGT-----GCTAACTCGTTTAATTCTCCTTAA------TGTG-----------------TTCTGTGCTGGACAC--AGGCTAGGAGGCAAATTAGCTTCCCAGGTGAGTGGTGTAGCTCGAATCTGAACTGTTTCCAGGACAGCCCCCGTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653632 134 + 11732439 TCA-----CTGGGACTGT-----GCTAACTCGTTTAATTCTCGTTAA------TATG-----------------TTCTGTGCTGGACACTGAGGCTGGGAGGCAAATTCGCTTCCCAGGTGAGTGGTGTAGCTCGAATCTGAACTGTTTCCGGGACAGCCCCCGTCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22819653 121 + 22939663 TCA-----TTGTACCTA------------GTGTTTAATTTTCCTTAA------GATG-----------------TTCTAGACTAGAAGCAAAGGCTGGGAGGCCAGTTCACCTTCTGG------TGTGTAGTTGGGATTCCAAACACTTCTGGAAGAGCCTCCCTCG i otoGar3.GL873542 C 0 I 2 s dasNov3.JH569290 220420 148 - 397369 tcaccgtgttgggattacgttaagttaactcatttagttctcctaaaaccccttgtgggtagactttgttaccattttGT-TTACCCACAAAGGCTGGGACGTACA------------------GCCATAGCTGGAGTGTGAAGTGCTCTCAGAAGTGCCTTCCTCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1832794 208 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=110025.000000 s hg38.chr20_KI270870v1_alt 78542 28 + 183433 CAGT--------------------CCCACCCAGCCCCACCCAGCCTTC s panTro5.chr20 132881 28 - 66533130 CAGT--------------------CCCACCCAGCCCCACCCAGCCTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083684 28 + 62195757 CAGT--------------------CCCACCCAGCCCCACCCAGCCTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468913 28 - 578057 CAGT--------------------CCCACCCAGCCCCACCCAGCCTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997724 48 - 110113093 CAGTcccacccagccccacccagccccacccagccccacccagccTTC i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 17943 28 + 372756 CAGT--------------------CCCACCCAGCCCCACCCAGCCTTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256149 27 + 16356641 cagc--------------------cccacccagccccacccagccTT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124831 28 + 1231380 CAGT--------------------CTCACCCAGCCCCGCCCAGCCTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653766 28 + 11732439 CAGT--------------------CCCACCCAGCCCCACCCAGCCTTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1833002 28 - 2029793 CAGC--------------------CCCACCCGGCCCCACCCAGCCTTC i proCoq1.NW_012150197v1 I 208 C 0 s otoGar3.GL873542 22819776 28 + 22939663 CAGC--------------------CCCACTGGGTCCCACCCAGCCTTC i otoGar3.GL873542 I 2 C 0 s dasNov3.JH569290 220568 15 - 397369 ----------------------CGAAGGCCCAGCACC----------- i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I e macFas5.chr10 96391793 8 + 96509753 I a score=85415.000000 s hg38.chr20_KI270870v1_alt 78570 16 + 183433 CTGCCGAGTGCCCCAG s panTro5.chr20 132909 16 - 66533130 CTGCCCAGTGTCCTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083712 16 + 62195757 CTGCCCAGTGTCCTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468941 16 - 578057 CTGCCCAGTGTCTCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997772 16 - 110113093 CTGCCCAGTGTCCCAG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96391801 16 + 96509753 CTTCCCAGTGCCCCAA i macFas5.chr10 I 8 C 0 s calJac3.chrUn_GL286459 17971 16 + 372756 CTGCCCAGTGTCCCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256176 16 + 16356641 CTGCCCAGAGTCCCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124859 16 + 1231380 CTGCCCAGAGTCCCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653794 16 + 11732439 CTGCCCAGTGTCCCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1833030 16 - 2029793 TCGCCCAGCGCCCCAG i proCoq1.NW_012150197v1 C 0 I 490 s otoGar3.GL873542 22819804 16 + 22939663 TTGTCCAGTGCCCCAG i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 220583 16 - 397369 CCGCCTGGCACCCCAA i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I a score=28244.000000 s hg38.chr20_KI270870v1_alt 78586 12 + 183433 GCTGCCATGGAG- s panTro5.chr20 132925 12 - 66533130 GCTGCCATGGAG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083728 12 + 62195757 GCTGCCATGGAG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468957 12 - 578057 GCTGCCATGCAG- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997788 12 - 110113093 GCTGCCTTGGAG- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96391817 6 + 96509753 GCTGCC------- i macFas5.chr10 C 0 C 0 s calJac3.chrUn_GL286459 17987 12 + 372756 ACTGCCGTGGAG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256192 12 + 16356641 ACTGCCCTGGAG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124875 12 + 1231380 ACTGCCGTGGAG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653810 10 + 11732439 ACTGCCGTGG--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22819820 12 + 22939663 ACAGCCATGGAG- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 220599 10 - 397369 ---ACCCAGAGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664296 32 - 3785965 I e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e manLeu1.NW_012101652v1 49425 32 - 179258 I e macNem1.NW_012014244v1 16863094 32 - 16982598 I e rheMac8.chr10 92723805 32 - 92844088 I a score=72421.000000 s hg38.chr20_KI270870v1_alt 78598 12 + 183433 GCTGCCCGCAGG s panTro5.chr20 132937 12 - 66533130 GCTGCCCGCAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083740 12 + 62195757 GCTGCCCGCAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468969 12 - 578057 GCTGCCCGCAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997800 12 - 110113093 GCTGCCCGCAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723837 12 - 92844088 GCTGCCCGCAGA i rheMac8.chr10 I 32 C 0 s macFas5.chr10 96391823 6 + 96509753 ------CGCAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863126 12 - 16982598 GCTGCCCGCAGA i macNem1.NW_012014244v1 I 32 C 0 s cerAty1.NW_012001373v1 3664328 12 - 3785965 GCTGCCCGCAGA i cerAty1.NW_012001373v1 I 32 C 0 s manLeu1.NW_012101652v1 49457 12 - 179258 GCTGCCCGCAGA i manLeu1.NW_012101652v1 I 32 C 0 s calJac3.chrUn_GL286459 17999 12 + 372756 GCTGCCTGCAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256204 12 + 16356641 GCTGCCTGCTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124887 12 + 1231380 GCTGCCTGCCGC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22819832 12 + 22939663 CTTGTCCTCAGA i otoGar3.GL873542 C 0 I 1 s dasNov3.JH569290 220609 11 - 397369 ACCATCCTCAG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e colAng1.NW_012114444v1 5535259 25 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e aotNan1.NW_018500483v1 2653820 0 + 11732439 C a score=1770895.000000 s hg38.chr20_KI270870v1_alt 78610 218 + 183433 CCACAGTATGACCCTCACTG---CCCTCGTGTCTCTTCCTCACAGCCTGGGACATATCTAGAGCCTGTCCCCAGCATACC--CTCCAACCTTATTCTCCGTCCCAAACTGGGTTGTTACCCACGATTCCCAAACATGCCTCCCTATCTCCCTTCATCTCCTGCAGCTGAATTTTTGCTTCTCTTTCAAGGCTTCTTACAGATGCCACCCC-GGGCCCTCCTT-TA s panTro5.chr20 132949 218 - 66533130 CCACAGTATGACCCTTACTG---CCCTCGTGTCTCTTCCTCACAGCCTGGGACATATCTAGAGCCTGTCCCCAGCATGCC--CTCCAACCTTATTCTCCGTCCCAAACTGGGTTGTTACCCACGATTCCCAAACATGCCTCCCTATCTCCCTTCATCTCCTGCAGCTGAATTTTTGCTTCTCTTTCAAGGCTTCTTATAGATGCCACCCC-GGGCCCTCCTT-TA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083752 218 + 62195757 CCACAGTATGACCCTTACTG---CCCTCGTGTCTCTTCCTCACAGCCTGGGACATATCTAGAGCCTGTCCCCAGCATGCC--CTCCAACCTTATTCTCCGTCCCAAACTGGGTTGTTACCCACGATTCCCAAACATGCCTCCCTATCTCCCTTCATCTCCTGCAGCTGAATTTTTGCTTCTCTTTCAAGGCTTCTTATAGATGCCACCCC-GGGCCCTCCTT-TA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 468981 218 - 578057 CCACAGTATGACCCTTACTG---CCCTCGTGTCTCTTCCTCACAGCCTGGGACATATCTAGAGCCTGTCCCCAGCATGCC--CTCCAACCTGATTCTCCGTCCCAGATTGGGTTGTTACCCACGATTCCCAAACATGCCTCCCTATCTCCCTTCATCTCCTGCAGCTGAATTTTTGCTTCTCTTTCAAGGCTTGGTACAGATGCCACCCC-GGGCCCTCCTT-TA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109997812 218 - 110113093 CCACAGTATGACCCTTACTG---CCCTCGTGTCTCTTCCTCACAGCCTGGGACACATCTAGAGCCTGTCCCCAGCATGCC--CTCCAACCTTATTCTCCGTCCCAAGCTGGGTTGTTACCCAAGATTCCCGAACATGCCTCCCTATCTCCCTTAATCTCCTGCAGTTGAATTTTTGCTTCTCTTTCAAGGCTTGGTACAGATGCCACCCT-GGACCCTCCTT-TA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92723849 219 - 92844088 CCACAGTGTGACCCTTACTG---CCCTCGTGTCTCTTCCTCACTGCCTGGGAGACACGTGGAGCCTGTCCCCAGCCTGCC--CTCCAACCTTACTCTCCGTCCCAAACTGGGCTGTTACCCAAGATTCCCTAACGTGCCTCCCTATGTCCCTTCATCTCCTGCAGTTGAAGTTTTGCTTCTCTTTCAAGGCTCGGTACAGATGCCGCCCCTGGGCCTTCCTT-TA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96391829 219 + 96509753 CCACAGTATGACCCTTACTG---CCCTCGTGTCTCTTCCTCACTGCCTGGGAGACACGTGGAGCCTGTCCCCAGCCTGCC--CTCCAACCTTACTCTCCGTCCCAAACTGGGCTGTTACCCAAGATTCCCTAACGTGCCTCCCTATGTCCCTTCATCTCCTGCAGTTGAAGTTTTGCTTCTCTTTCAAGGCTCAGTACAGATGCCACCCCTGGGCCTTCCTT-TA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863138 219 - 16982598 CCACAGTATGACCCTTACTG---CCCTCGTGTCTCTTCCTCACTGCCTGGGAGACATGTGGAGCCTGTCCCCAGCCTGCC--CTCCAACCTTATTCTCCGTCCCAAACTGGGTTGTTACCCAAGATTCCCTAACGTGCCTCCCTATGTCCCTTCATCTCCTGCAGTTGAATTTTTGCTTCTCTTTCAAGGCTCAGTACAGATGCCACCCCTGGGCCTTCCTT-TA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664340 219 - 3785965 CCACAGTATGACCCTTACTG---CCCTCGTGTCTCTTCCTCACCGCCTGGGAGACATCTGGAGCCTGTCCCCAGCCTGCC--CTCCAACCTTATTCTCCGTCCCAAACTGGGTTGTTACCCAAGATTCCCTAACGTGCCTCCCTATGTCCCTTCATCTCCTGCAGTTGAATTTTTGCTTCTCTTTCAAGGCTTAGTACAGGTGCCACCCCTGGGCCTTCCGT-TA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49469 219 - 179258 CCACAGTATGACCCTTACTG---CCCTTGTGTCTCTTCCTCACCGCCTGGGAGACATCTGGAGCCTGTCCCCAGCCTGCC--CTCCGACCTTATTCTCCGTCCCAAACTGGGTTGTTACCCAAGATTCCCTAACGTGCCTCCCTATGTCCCTTCATCTCCTGCAGTTGAATTTTTGCTTCTCTTTCAAGGCTTAGTACAGATGCCACCCCTGGGCCTTCCTT-TA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535284 219 - 5823884 CCACAGTATGACCCTTACTG---CCCTGGTGTCTCTTCCTCACCGCCTGGGAGACATCTAGAGCCTGTCCCCAGCCTGCC--CTCCAACCTTATTCTCCGTCCCAAACTGGGTTGTTACCCAAGATTCCCTAACATGCCTCCCTATCTCCCTTCATCTCCTGCAGTTGAATTTTTGCTTCTCTTTCAAGGCTTAGTACAGATGCCACCCCTGTGCCTTCCTT-TA i colAng1.NW_012114444v1 I 25 C 0 s calJac3.chrUn_GL286459 18011 215 + 372756 CCACAGGGTGACCCTTACTG---CTCTCATGTCTCTTCCTTTCAGCCTGGGAGGCACCTAGGTCCTGTCCCCAGCTTTCC--CTCCAACCTTTTTCTGCATCCCAAAGTGGGTTGTTGCCCAAGATCCCGGAGCACACCTCCCTATCTCCCTCCATCTCCCGCTGCTGGAGCTTTGCTTCTCGTTCAAGGCTTCGTGCAGATGCCGCCCC-GGG---TTCTT-TA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256216 216 + 16356641 CCACAGGGAGACCCTC-CTG---CCCTCCTGTCTCTTCCTTTCTGCCTGGGAGACGCCTAGGTCCCGTCCCCAGCTTGCC--CTCCATCCTTATTCTCCATCCCAGAGTGGGTTGTTGCCCAAGATCCCTGAGCACCCCTTCCTTTCTCCCTCCATCTCCTGCAGCTGGAGTTTTGCTTCTCTTTCAAGGCTTCGTACAGATGCCGCCTG-GGT-TCTTCTT-TC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1124899 217 + 1231380 CCACAGGGTGACCCTA-CTG---CCCTCATGTCCCTTCCTTTCAGCCTGGGAGACGCCTAGGTCCTGTCTCGGCCTTGCCCTCTCCAAGCTTATTCTCCATCCCAAAGTGGGTTGTTGCCCAAGATCCCTGAGCACCCCTCCCTTTCTCCCTCCATCTCCCGCAGCTGGA--TTTGCTTCTCTTTCAAGTTTTCGTGCAGATGCCGCCCC-GGGTTCTTCTT-TA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2653820 197 + 11732439 ----AGGGTGACCCTGACTG---CCC----------------CAGCCTGGGAGACACCCAGGTCCTGTCCCCAGCTTGCC--CTTCCACCTTATTCTCCATCCCAAAGTGCGTTGTTGCCCAAGACCCCTGAGCACACTTCCCTTTTCCCCTCCATCTCCTGCAGCTGGAGTTTTGCTTCTCTTTCAAGGCTTCGTGCAGATGCCACCCG-GGT-TCTTCTT-TA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22819845 202 + 22939663 CCA-----TGACCCTTGCTG---CCCTGAT-----CTCCTCATGGCCTGGG--TCATCCTGGGTCTGTCCTCAGCCTGCC--TTCTGGTCTTCCTCTACTTTCCCAAATGGGTTATT-CCCAAGACCCTC-AACATGTCTCC--ATCTCCCCCCACCTCTTACAGTTGGG-TTTTGCTTTTCTTTCAAGGCCTAGCACAGATATCCTTCT-ACACCCTTCTTCTG i otoGar3.GL873542 I 1 C 0 s dasNov3.JH569290 220620 175 - 397369 --ACAGCTCTGCCTGCACCGTGTCTGCCGCGGCCCTTTCTCA-----------------------GGTCCCCAACCCGGC--CCCCACCTGCCTTCTTCAGCCC-----GGGT-----CACCAGACCCCTCAACACGCCTCCTC-----------TCACCTGCAGTTGGAATTTTACATCTGTCCCGAGGCTGAGCATGGAGGCTGCTCT-GGGAGGCTCTG-TG i dasNov3.JH569290 C 0 I 159 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I a score=1170623.000000 s hg38.chr20_KI270870v1_alt 78828 151 + 183433 CTTACCTTTACTCTCACGTGTCTCACATTTGAAATCCCGCTCTCGGGATGCAATGTCTCTGCTGTGACATTGCATCAGACTGATG------GGTATCCCTGCTTGCTTTCCGGGAGAGCCTGCAGGCAACCAGCTCTGGGGGC----------------------------------TGCTGGGCCTGAGG s panTro5.chr20 133167 151 - 66533130 CTTACCTTTACTCTCACGTGTCTCACATTTGAAATCCCGCTCTCGGGATGCAATGTCTCTGCTGTGACATTGCATCAGACTGATG------GGTATCCCTGCTTGCTTTCCGGGAGAGCCTGCAGGCAACCAGCTCTGGGGGC----------------------------------TGCTGGGCCTGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62083970 151 + 62195757 CTTACCTTTACTCTCACGTGTCTCACATTTGAAATCCCGCTCTCGGGATGCAATGTCTCTGCTGTGACATTGCATCAGACTGATG------GGTATCCCTGCTTGCTTTCCGGGAGAGCCTGCAGGCAACCAGCTCTGGGGGC----------------------------------TGCTGGGCCTGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469199 151 - 578057 CTTACCTTTACTCTCACGTGTCTCACATTTGAAATCCCGCTCTCGGGATGCAATGTCTCTGCTGTGACATTGCATCAGACTGATG------GGTATCCCTGCTTGCTCTCCGGGAGAGCCTGCAGGCAACCAGCTCTGGGGGC----------------------------------TGCTGGGCCTGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998030 139 - 110113093 CTTACCTTTACTCTCATGTGTCTCACATTTGAAATCCCACTCTCGGGATGCAGTGTCTCTGCTGT------------GACTGATG------GGCGTCCCTGCTTGCCTTCCGGGAGAGCCTGCAGGTAACCAGCTCTGGGGGC----------------------------------TGCCGGGCCCGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724068 150 - 92844088 CTTACCTTTACTCTCATGTGTCTCACATTTGAAATCCCGCTCTCCGGATGTAGTGTCTCTGCTGTGACATTGCATCAGGCTGATG------GGTGTCCCTGCTTGCCTCCCGGGAGAGCCTGCAGGCAACCACCTCTGGGGG-----------------------------------TGCCGGGCCTGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392048 150 + 96509753 CTTACCTTTACTCTCATGTGTCTCACATTTGAAATCCCGCTCTCCGGATGTAGTGTCTCTGCTGTGACATTGCATCAGGCTGATG------GGTGTCCCTGCTTGCCTCCCAGGAGAGCCTGCAGGCAACCACCTCTGGGGG-----------------------------------TGCCGGGCCTGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863357 150 - 16982598 CTTACCTTTACTCTCATGTGTCTCACATTTGAAATCCCGCTCTCCGGATGTAATGTCTCTGCTGTGACATTGCATCAGGCTGATG------GGTGTCCCTGCTTGCCTCCCGGGAGAGCCTGCAGGCAACCACCTCTGGGGG-----------------------------------TGCCGGGCCTGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664559 150 - 3785965 CTTACCTTTACTCTCACGGGTCTCACATTTGAAATCCCGCTCTCCGGATGTAATGTCTCTGCTGTGACATTGCATCAGGCTGATG------GGTGTCCCTGCTTGCCTCCCGGGAGAGCCTGCAGGCAACCACCTCTGGGGG-----------------------------------TGCCGGGCCTGAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49688 150 - 179258 CTTACCTTTACTCTCACGTGTCTCACATTTGAAATCCCGCTCTCCGGATGTAATGTCTCTGCTGTGACATTGCATCAGGCTGATG------GGTGTCCCTGCTTGCCTCCCGGGAGAGCCTGCAGGCAACCACCTCTGGGGG-----------------------------------TGCCGGGCCTGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535503 116 - 5823884 CTTACCTTTACTCTCACGTGTCTCACATTTGAAATCCCGCTCTCCGGATGTA----------------------------------------GTGTCCCTGCTTGCCTTCCGGGAGAGCCTGCAGGCAACCACCTCTGGGGG-----------------------------------TGCCGGGCCTGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18226 144 + 372756 CCTACGTTTACTCTCATGTGTCTCACATTTGAAATCCCTCTCTCAGCA-------GCGCTGCTGTGACATTGCATCAGAGTGATG------GGTGTCCCCGCTTGCCTTCCAGGAAAGCCTGCAGGCAACCGGCTCCAAGGCC----------------------------------TGCTGGGCCTGGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256432 178 + 16356641 CTTACGTTTACTCTCATGTGTCTCACATTTGAAATCCCTCTCTCGGCA-------GTGCTGCTGTGACACTGCATCAGAGTGATG------GGTGTCCCTGCTTGCCTTCCAGGAGAGCCTGCAGGCAACCAGCTCTAAGGCCTGCTGAACATGAGGGGTACCGGAAGTCTAGGACATGCTGGGCCTGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125116 144 + 1231380 CTTACGTGTACTCTCATGTGTCTCACATTTGAAATCCCTCTCTCAGCA-------GCACTGCTGTGACATTGCATCAGAGCGATG------GGCGTCCCTGCTTGCCTTCCAGGAGAGCCTGCAGGCAACCAGCTCTAAGGCC----------------------------------TGCTGGCCCCGAGG i cebCap1.NW_016107870v1 C 0 I 191 s aotNan1.NW_018500483v1 2654017 143 + 11732439 C-TGCGTTTACTCTCATGTGTCTCACATTTGAAATCCGTTTCTCGGCA-------GCGCTGCTGTGACATTGCATCAGGGTGATG------GCTGTCCCTGCTTGCCTTCCAGGAGAGCCTGCAGGCAACCAGCTCTAAGGCC----------------------------------TGCTGGACCCGAGG i aotNan1.NW_018500483v1 C 0 I 150 s otoGar3.GL873542 22820047 138 + 22939663 CTTACCTTTACTGGCATGTGTCACA-----------CCTCTCTTGCCA-------GCTCTGCCAAGACATTGCACCAGACAGTGGACTTACAGTGCCCCTGTTTGCCCTCCCGGACAGCCTGCTGACAGCCAGCTCTGGGCC-----------------------------------TGCCTTACACCAGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e dasNov3.JH569290 220795 159 - 397369 I a score=68208.000000 s hg38.chr20_KI270870v1_alt 78979 15 + 183433 AAAG----------------------------------------------------------------------CATCCCAAGTC s panTro5.chr20 133318 15 - 66533130 AAAG----------------------------------------------------------------------CATCCCAAGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084121 15 + 62195757 AAAG----------------------------------------------------------------------CATCCCAAGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469350 15 - 578057 AAAG----------------------------------------------------------------------CATCCCAAGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998169 15 - 110113093 AAAG----------------------------------------------------------------------CATCCCAAGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724218 15 - 92844088 AAAG----------------------------------------------------------------------CACCCCAAGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392198 85 + 96509753 AAAGCACCCCAAGTCTGGGGCAGCTGGACCCAACGAGGCCACCCCAAGTCTGGGGCAGCTGGACCCAATGAGGCCACCCCAAGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863507 15 - 16982598 AAAG----------------------------------------------------------------------CACCCCAAGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664709 15 - 3785965 AAAG----------------------------------------------------------------------CACCCCAAGTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49838 15 - 179258 AAAG----------------------------------------------------------------------CACCCCAAGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535619 15 - 5823884 AAAG----------------------------------------------------------------------CACCCCAAGTC i colAng1.NW_012114444v1 C 0 I 119 s calJac3.chrUn_GL286459 18370 13 + 372756 --GG----------------------------------------------------------------------CACCCCAAGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256610 13 + 16356641 --GG----------------------------------------------------------------------GACCCCGAGTC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22820185 15 + 22939663 AGAA----------------------------------------------------------------------GGGCCCGAGTC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e dasNov3.JH569290 220795 159 - 397369 I e cebCap1.NW_016107870v1 1125260 191 + 1231380 I e aotNan1.NW_018500483v1 2654160 150 + 11732439 I a score=48516.000000 s hg38.chr20_KI270870v1_alt 78994 19 + 183433 -----------AAGGGGCTGCTGG------------------ACCCAA- s panTro5.chr20 133333 19 - 66533130 -----------AAGGGGCTGCTGG------------------ACCTGA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084136 19 + 62195757 -----------AAGGGGCTGCTGG------------------ACCTGA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469365 19 - 578057 -----------AAGGGGCTGCTGG------------------ACCCGA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998184 19 - 110113093 -----------TAGGGGCTGCTGG------------------ACCCCA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724233 18 - 92844088 ------------TGGGGCAGCTGG------------------ACCCAA- i rheMac8.chr10 C 0 I 171 s macFas5.chr10 96392283 18 + 96509753 ------------TGGGGCAGCTGG------------------ACCCAA- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863522 18 - 16982598 ------------TGGGGCAGCTGG------------------ACCCAA- i macNem1.NW_012014244v1 C 0 I 173 s cerAty1.NW_012001373v1 3664724 18 - 3785965 ------------TGGGGCAGCTGG------------------ACCCAA- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49853 18 - 179258 ------------TGGGGCAGCTGG------------------ACCCAA- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 18383 19 + 372756 -----------TAGGACATGCTGG------------------GCCTGG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256623 19 + 16356641 -----------TAGGATCTGCTGG------------------GCCCAA- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22820200 49 + 22939663 TAGCTCAGCCCTGGTGTGTGCTGGCCTGGAGGTTCCCTTTCCACCCCAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e colAng1.NW_012114444v1 5535634 119 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e dasNov3.JH569290 220795 159 - 397369 I e cebCap1.NW_016107870v1 1125260 191 + 1231380 I e aotNan1.NW_018500483v1 2654160 150 + 11732439 I a score=-6887.000000 s hg38.chr20_KI270870v1_alt 79013 2 + 183433 T----G s panTro5.chr20 133352 2 - 66533130 T----G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084155 2 + 62195757 T----G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469384 2 - 578057 T----G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998203 3 - 110113093 TG---G i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96392301 2 + 96509753 T----G i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3664742 2 - 3785965 T----G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49871 2 - 179258 T----G i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 18402 2 + 372756 -G---G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256642 2 + 16356641 -G---G i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22820249 5 + 22939663 -CACAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e colAng1.NW_012114444v1 5535634 119 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e dasNov3.JH569290 220795 159 - 397369 I e macNem1.NW_012014244v1 16863540 173 - 16982598 I e cebCap1.NW_016107870v1 1125260 191 + 1231380 I e aotNan1.NW_018500483v1 2654160 150 + 11732439 I e rheMac8.chr10 92724251 171 - 92844088 I a score=19041.000000 s hg38.chr20_KI270870v1_alt 79015 4 + 183433 GGGC s panTro5.chr20 133354 4 - 66533130 GGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084157 4 + 62195757 GGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469386 4 - 578057 GGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998206 4 - 110113093 GGGC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96392303 4 + 96509753 AGGC i macFas5.chr10 C 0 I 71 s cerAty1.NW_012001373v1 3664744 4 - 3785965 AGGC i cerAty1.NW_012001373v1 C 0 I 95 s manLeu1.NW_012101652v1 49873 4 - 179258 AGGC i manLeu1.NW_012101652v1 C 0 I 95 s calJac3.chrUn_GL286459 18404 4 + 372756 GTAC i calJac3.chrUn_GL286459 C 0 I 3 s saiBol1.JH378156 16256644 4 + 16356641 GGGC i saiBol1.JH378156 C 0 I 75 s otoGar3.GL873542 22820254 4 + 22939663 GGGC i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 220954 4 - 397369 GGGC i dasNov3.JH569290 I 159 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e colAng1.NW_012114444v1 5535634 119 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e macNem1.NW_012014244v1 16863540 173 - 16982598 I e cebCap1.NW_016107870v1 1125260 191 + 1231380 I e aotNan1.NW_018500483v1 2654160 150 + 11732439 I e rheMac8.chr10 92724251 171 - 92844088 I a score=-4634.000000 s hg38.chr20_KI270870v1_alt 79019 6 + 183433 ACTGCA- s panTro5.chr20 133358 6 - 66533130 ACCGCA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084161 6 + 62195757 ACCGCA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469390 6 - 578057 ACCGCA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998210 6 - 110113093 ACCGCA- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96392378 6 + 96509753 ACGGCA- i macFas5.chr10 I 71 I 18 s calJac3.chrUn_GL286459 18411 1 + 372756 A------ i calJac3.chrUn_GL286459 I 3 C 0 s saiBol1.JH378156 16256723 1 + 16356641 A------ i saiBol1.JH378156 I 75 C 0 s otoGar3.GL873542 22820258 2 + 22939663 ----TA- i otoGar3.GL873542 C 0 I 4 s dasNov3.JH569290 220958 6 - 397369 -CCTCCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664748 95 - 3785965 I e colAng1.NW_012114444v1 5535634 119 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e manLeu1.NW_012101652v1 49877 95 - 179258 I e macNem1.NW_012014244v1 16863540 173 - 16982598 I e cebCap1.NW_016107870v1 1125260 191 + 1231380 I e aotNan1.NW_018500483v1 2654160 150 + 11732439 I e rheMac8.chr10 92724251 171 - 92844088 I a score=-2448.000000 s hg38.chr20_KI270870v1_alt 79025 1 + 183433 -A s panTro5.chr20 133364 1 - 66533130 -A i panTro5.chr20 C 0 I 86 s panPan2.chr20 62084167 1 + 62195757 -A i panPan2.chr20 C 0 I 86 s gorGor5.CYUI01015848v1 469396 1 - 578057 -A i gorGor5.CYUI01015848v1 C 0 I 86 s nomLeu3.chr13 109998216 1 - 110113093 -A i nomLeu3.chr13 C 0 I 123 s macFas5.chr10 96392402 1 + 96509753 -G i macFas5.chr10 I 18 C 0 s colAng1.NW_012114444v1 5535753 1 - 5823884 -A i colAng1.NW_012114444v1 I 119 C 0 s calJac3.chrUn_GL286459 18412 1 + 372756 -A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256724 1 + 16356641 -A i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22820264 1 + 22939663 -G i otoGar3.GL873542 I 4 C 0 s dasNov3.JH569290 220964 1 - 397369 C- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e cerAty1.NW_012001373v1 3664748 95 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e manLeu1.NW_012101652v1 49877 95 - 179258 I e macNem1.NW_012014244v1 16863540 173 - 16982598 I e cebCap1.NW_016107870v1 1125260 191 + 1231380 I e aotNan1.NW_018500483v1 2654160 150 + 11732439 I e rheMac8.chr10 92724251 171 - 92844088 I a score=8666.000000 s hg38.chr20_KI270870v1_alt 79026 1 + 183433 G s panTro5.chr20 133451 1 - 66533130 G i panTro5.chr20 I 86 C 0 s panPan2.chr20 62084254 1 + 62195757 G i panPan2.chr20 I 86 C 0 s gorGor5.CYUI01015848v1 469483 1 - 578057 G i gorGor5.CYUI01015848v1 I 86 C 0 s rheMac8.chr10 92724422 1 - 92844088 G i rheMac8.chr10 I 171 C 0 s macFas5.chr10 96392403 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863713 1 - 16982598 G i macNem1.NW_012014244v1 I 173 C 0 s cerAty1.NW_012001373v1 3664843 1 - 3785965 G i cerAty1.NW_012001373v1 I 95 C 0 s manLeu1.NW_012101652v1 49972 1 - 179258 G i manLeu1.NW_012101652v1 I 95 C 0 s colAng1.NW_012114444v1 5535754 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18413 1 + 372756 G i calJac3.chrUn_GL286459 C 0 I 315 s saiBol1.JH378156 16256725 1 + 16356641 G i saiBol1.JH378156 C 0 I 4 s aotNan1.NW_018500483v1 2654310 1 + 11732439 G i aotNan1.NW_018500483v1 I 150 C 0 s otoGar3.GL873542 22820265 1 + 22939663 A i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 220965 1 - 397369 G i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e cebCap1.NW_016107870v1 1125260 191 + 1231380 I e nomLeu3.chr13 109998217 123 - 110113093 I a score=35980.000000 s hg38.chr20_KI270870v1_alt 79027 4 + 183433 TCTG s panTro5.chr20 133452 4 - 66533130 TCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084255 4 + 62195757 TCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469484 4 - 578057 TCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998340 4 - 110113093 TCTG i nomLeu3.chr13 I 123 C 0 s rheMac8.chr10 92724423 4 - 92844088 TCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392404 4 + 96509753 TCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863714 4 - 16982598 TCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664844 4 - 3785965 TCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49973 4 - 179258 TCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535755 4 - 5823884 TCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18729 4 + 372756 TCTG i calJac3.chrUn_GL286459 I 315 C 0 s saiBol1.JH378156 16256730 4 + 16356641 TCTG i saiBol1.JH378156 I 4 C 0 s aotNan1.NW_018500483v1 2654311 4 + 11732439 TCTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22820266 4 + 22939663 GCAG i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 220966 3 - 397369 -TTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e cebCap1.NW_016107870v1 1125260 191 + 1231380 I a score=752020.000000 s hg38.chr20_KI270870v1_alt 79031 79 + 183433 GACCAGGGAAGGATCCACATTTTAGCTTTGAGGTTGGAAGGACACTTGTGTTGGGAAG------AAAAGCTACTTAAATGCTCAG s panTro5.chr20 133456 79 - 66533130 GACCAGGGAAGGATCCACATTTTAGCTTTGAGGTTGGAAGGACACTTATGTTGGGAAG------AAAAGCTACTTAAATGCTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084259 79 + 62195757 GACCAGGGAAGGATCCACATTTTAGCTTTGAGGTTGGAAGGACACTTGTGTTGGGAAG------AAAAGCTACTTAAATGCTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469488 79 - 578057 GACCAGGGAAGGATCCACATTTTAGCTTTGAGGTTGGAAGGACACTTGTGTTGGGAAG------AAAAGCTACTTAAATGCTCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998344 79 - 110113093 GACCAGGGAAGGATCCACATTTTAGCTTTGAGGTTGGAAGGACACTTGTGTTGGGGAG------AAAAGCTACTTAAATGCTCAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724427 79 - 92844088 GACCAGGGGAGGATCCACATTTTAGCTTTGAGGTTGGAAGGAGACTTGTGTTGGGAAG------AAAAGCTGCTTAAATGCTCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392408 79 + 96509753 GACCAGGGGAGGATCCACATTTTAGCTTTGAGGTTGGAAGGAGACTTGTGTTGGGAAG------AAAAGCTGCTTAAATGCTCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863718 79 - 16982598 GACCAGGGGAGGATCCACATTTTAGCTTTGAGGTTGGAAGGAGACTTGTGTTGGGAAG------AAAAGCTGCTTAAATGCTCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664848 79 - 3785965 GACCAGGGGAGGATCCACATTTTAGCTTTGAGGTTGGAAGGAGACTTGTGTTGGGAAG------AAAAGCTGCTTAAATGCTCAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 49977 79 - 179258 GACCAGGGGAGGATCCACATTTTAGCTTTGAGGTTGGAAGGAGACTTGTGTTGGGAAG------AAAAGCTGCTTAAATGCTCAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535759 79 - 5823884 GACCAGGGGAGGATCCACATTTTGGCTTTGAGGTTGGAAGGAGACTTGTGTTGGGAAG------AAAAGCTGCTTAAATGCTCAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18733 78 + 372756 GACCAGGAAAGGATCTA-GTTTTGGCTTTGAGGTTGGAAGGATACTTGTGGTGGGAGG------AAAAGCTACTTAAATGCTCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256734 79 + 16356641 GACCAGGAAAGGATCTACATTTTGGCTTTGAGGTTGGAAGGATACTTGTGGTGGGAGG------AAAAGCTACTTAAATGCTCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125451 79 + 1231380 GACCAGGAAAGGATCTACATTTTGGCTTTGAGGTTGGAAGGATACGTGTGGTGGGAGG------AAAAGCTACTTAAATGCTCAG i cebCap1.NW_016107870v1 I 191 C 0 s aotNan1.NW_018500483v1 2654315 79 + 11732439 GACCAGGAAAGGATCTACATTTTGGCTTTGAGGTTGAAAGGATACTTGTGGTGGGAGG------AAAAGCTACGTAAACGCTCAG i aotNan1.NW_018500483v1 C 0 I 129 s otoGar3.GL873542 22820270 84 + 22939663 -AGCCAGGAAGGATCTTTGTTTTGGCACTAAGATGGGAAGGAAATATGAGGTGAGAAGAAAAACAAAAACTACTTCCATGCCCAG i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 220969 65 - 397369 GA--GGCGGAAGTTTTAAATGCAGGCTTTGTGG------GAACA-----GGTGAAAGA------AAGAGCTAC-TAAGTGCTCAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I a score=140070.000000 s hg38.chr20_KI270870v1_alt 79110 26 + 183433 TTGAG-------CAGTTCTGAATTATTCCTCCA s panTro5.chr20 133535 9 - 66533130 TTGAG-------CAGT----------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084338 26 + 62195757 TTGAG-------CAGTTCTGAATTTTTCCTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469567 26 - 578057 TTGAG-------CAGTTCTGAATTTTTCCTCCA i gorGor5.CYUI01015848v1 C 0 I 2 s nomLeu3.chr13 109998423 26 - 110113093 TTGAG-------CAGTTCTGAATTTTTCCTCCA i nomLeu3.chr13 C 0 I 2 s rheMac8.chr10 92724506 26 - 92844088 TCGAG-------TGGTTCTGAATTTTTCCTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392487 26 + 96509753 TCGAG-------TGGTTCTGAATTTTTCCTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863797 26 - 16982598 TCAAG-------TGGTTCTGAATTTTTCCTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664927 26 - 3785965 TCGAG-------TGGTTCTGAATTTTTCCTCCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50056 26 - 179258 TCGAG-------TGGTTCTGAATTTTTCCTCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535838 26 - 5823884 TCGAG-------TGGTTCTGAATTTTTCCTCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18811 25 + 372756 CTGTG-------GAGTTCTGAATT-TTCCTGCA i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16256813 25 + 16356641 CTGTG-------GAGTTCTGAATT-TTCCTCCA i saiBol1.JH378156 C 0 I 2 s cebCap1.NW_016107870v1 1125530 25 + 1231380 CTGTG-------GAGTTCTGAATT-TTCCTCCA i cebCap1.NW_016107870v1 C 0 I 2 s otoGar3.GL873542 22820354 33 + 22939663 TGGAGGAGTTTTCAGTTCTGAATCTTCCCTCTA i otoGar3.GL873542 C 0 I 2 s dasNov3.JH569290 221034 31 - 397369 TGGAAAAATTT-CCGTTCTGAGTT-TTCCTCTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839114 672 + 57149010 I e aotNan1.NW_018500483v1 2654394 129 + 11732439 I a score=106603.000000 s hg38.chr20_KI270870v1_alt 79136 13 + 183433 --CTCTGTTCCTTCT s panTro5.chr20 133544 12 - 66533130 ---TCTGTTCCTTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084364 13 + 62195757 --CTCTGTTCCTTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469595 13 - 578057 --CTCTGTTCCTTCT i gorGor5.CYUI01015848v1 I 2 C 0 s nomLeu3.chr13 109998451 13 - 110113093 --CTCTGTTCCTTCT i nomLeu3.chr13 I 2 C 0 s rheMac8.chr10 92724532 13 - 92844088 --CTCTGTTCCTTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392513 13 + 96509753 --CTCTGTTCCTTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863823 13 - 16982598 --CTCTGTTCCTTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664953 13 - 3785965 --CTCTGTTCCTTCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50082 13 - 179258 --CTCTGTTCCTTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535864 13 - 5823884 --CTCTGTTCCTTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18838 13 + 372756 --ATCTGCTCCTCCT i calJac3.chrUn_GL286459 I 2 C 0 s saiBol1.JH378156 16256840 13 + 16356641 --ATCTGCTCGTCCT i saiBol1.JH378156 I 2 C 0 s cebCap1.NW_016107870v1 1125557 13 + 1231380 --ATCTGCTTGTCCT i cebCap1.NW_016107870v1 I 2 C 0 s micMur3.chr18 56839786 13 + 57149010 --CTCTGCTCCTTTG i micMur3.chr18 I 672 C 0 s otoGar3.GL873542 22820389 13 + 22939663 --ATCTGCTCCTTCT i otoGar3.GL873542 I 2 C 0 s dasNov3.JH569290 221065 12 - 397369 TTATCTGCTTCT--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833046 490 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e aotNan1.NW_018500483v1 2654394 129 + 11732439 I a score=586070.000000 s hg38.chr20_KI270870v1_alt 79149 53 + 183433 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATCAAGTCCGCCTAGATAAAA s panTro5.chr20 133556 53 - 66533130 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATCAAGTCCGCCTAGATAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084377 53 + 62195757 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATCAAGTCCGCCTAGATAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469608 53 - 578057 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATCAAGTCCGCCTAGATAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998464 53 - 110113093 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGCGATCATGTCCGCCTAGATAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724545 53 - 92844088 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATCATGTCTGCCCAGATAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392526 53 + 96509753 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATCATGTCTGCCCAGATAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863836 53 - 16982598 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATCATGTCTGCCCAGATAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3664966 53 - 3785965 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATCATGTCTGCCCAGATAAAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50095 53 - 179258 TGAGGTTGAGCCCTGCCTTCTGGTTATTTAAGATCATGTCTGCCCAGATAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535877 53 - 5823884 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATCATGTCTGCCCAGATAAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18851 53 + 372756 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATAATGTCCACCCAGATAAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256853 53 + 16356641 TGAAGTTGATCCCTGCCTTCTGGTTATTTGAGATAATGTCCATCCAGATAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125570 53 + 1231380 TGAGGTTGAGCCCTGCCTTCTGGTTATTTGAGATAATGTCCACCCAGATAAAA i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56839799 53 + 57149010 TGAGGTTAAGCCCTGCCTTTTGGTGATTTGAGACCAAGTGCACCCAGATAAAA i micMur3.chr18 C 0 I 826 s proCoq1.NW_012150197v1 1833536 53 - 2029793 TGAGGTCGAGCCCTGCCTTTTGGTGATTTGAGACCGAGTCCACCCAGATAAAA i proCoq1.NW_012150197v1 I 490 I 427 s otoGar3.GL873542 22820402 53 + 22939663 CAGGCTTGAGCCTTGCCTTCTGGTGATTTGAGACCATGTCCACCCAGATAAAA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 221077 36 - 397369 TGAGGTTGG--------TTCTGGTGA-AGGGGCTCATGTCTACAC-------- i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e aotNan1.NW_018500483v1 2654394 129 + 11732439 I a score=7710.000000 s hg38.chr20_KI270870v1_alt 79202 1 + 183433 T s panTro5.chr20 133609 1 - 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084430 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469661 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998517 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724598 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392579 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863889 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665019 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50148 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535930 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18904 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256906 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125623 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22820455 1 + 22939663 A i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 221113 1 - 397369 T i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e aotNan1.NW_018500483v1 2654394 129 + 11732439 I a score=311190.000000 s hg38.chr20_KI270870v1_alt 79203 37 + 183433 GTTAGACTATTACTGCACATTAAAGAGGTACCTCTTA s panTro5.chr20 133610 37 - 66533130 GTTAGACTATTACTGCACATTAAAGAGGTACCTCTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084431 37 + 62195757 GTTAGACTATTACTGCACATTAAAGAGGTACCTCTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469662 37 - 578057 GTTAGACTATTACTGCACATTAAAGAGGTACCTCTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998518 37 - 110113093 GTTAGACTATGAATGCACATTGGAGAGGTCCCTCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724599 37 - 92844088 GTTAGACTATGAATGCACATTAAAGAGATACCTCTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392580 37 + 96509753 GTTAGACTATGAATGCACATTAAAGAGATACCTCTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863890 37 - 16982598 GTTAGACTATGAATGCACATTAAAGAGATACCTCTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665020 37 - 3785965 GTTAGACTATGAATGCACATTAAAGAGATACCTCTTA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50149 37 - 179258 GTTAGACTATGAATGCACATTAAAGAGATACCTCTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535931 37 - 5823884 GTTAGACTATGAATGCACATTAAAGAGATACCTCTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18905 37 + 372756 GTTGGACTATGAATGCACATTACAGAGGTACCTCTTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256907 37 + 16356641 GTTGGACTATGAATGCACATTAAAGAGGTACCTCTTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125624 37 + 1231380 GTTGGACTATGAGTGCACATTAGAGAGGTACCTCTTG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22820456 37 + 22939663 GTTGGACTACAAATCAGCACTAAAGAAGTACATCTTA i otoGar3.GL873542 C 0 I 111 s canFam3.chr24 47582765 35 + 47698779 GTCAGGCTG-GTATCCAAACTAAAGAG-TGCCTCTTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 221114 30 - 397369 AGTAGACGAT---CCCAC-CTAAAGAGGCTCCTC--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e aotNan1.NW_018500483v1 2654394 129 + 11732439 I a score=42881.000000 s hg38.chr20_KI270870v1_alt 79240 11 + 183433 CAGTCA----TTTTT s panTro5.chr20 133647 11 - 66533130 CAGTCA----TTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084468 10 + 62195757 CAGTCA-----TTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469699 10 - 578057 CAGTCA-----TTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998555 11 - 110113093 CAGTCA----TTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724636 14 - 92844088 CAGTCA-TTTTTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392617 14 + 96509753 CAGTCA-TTTTTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863927 15 - 16982598 CAGTCATTTTTTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665057 14 - 3785965 CAGTCA-TTTTTTTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50186 14 - 179258 CAGTCA-TTTTTTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535968 14 - 5823884 CAGTCA-TTTTTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18942 10 + 372756 CAGTCA-----CTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256944 10 + 16356641 CAGTCA-----CTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125661 10 + 1231380 CAGTCA-----CTTT i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22820604 11 + 22939663 cagcta----ttttt i otoGar3.GL873542 I 111 I 113 s canFam3.chr24 47582800 9 + 47698779 ------CTGGTTCTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 221144 2 - 397369 -------------TT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e aotNan1.NW_018500483v1 2654394 129 + 11732439 I a score=70169.000000 s hg38.chr20_KI270870v1_alt 79251 11 + 183433 TTTTAAGTGGT s panTro5.chr20 133658 11 - 66533130 TTTTAAGTGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084478 11 + 62195757 TTTTAAGTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469709 11 - 578057 TTTCCAGTGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998566 11 - 110113093 TTTTAAGTGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724650 11 - 92844088 TCTTCAGTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392631 11 + 96509753 TCTTCAGTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863942 11 - 16982598 TCTTCAGTGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665071 11 - 3785965 TCTTCAGTGGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50200 11 - 179258 TCTTCAGTGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535982 11 - 5823884 TCTTTAGTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18952 11 + 372756 TAAAAAGTGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256954 11 + 16356641 TAGAAAGCGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125671 11 + 1231380 TAGAAAGCGGT i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22820728 11 + 22939663 TTTTTAATGGT i otoGar3.GL873542 I 113 C 0 s canFam3.chr24 47582809 10 + 47698779 -CTTTAATGGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 221146 11 - 397369 TTTTTAGGGCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e aotNan1.NW_018500483v1 2654394 129 + 11732439 I a score=1002159.000000 s hg38.chr20_KI270870v1_alt 79262 104 + 183433 CTGATTTTGTTTTGGCTGGCTTATTTAGAGTTTTGTGCTTCCTCATTTTATTTCCACGAAGGCTGTG-CCCAACC-----TTAGCCT-C-GGTGAG-----CCGTGACCCAGCCATG s panTro5.chr20 133669 104 - 66533130 CTGATTTTGTTTTGGCTGGCTTATTTAGAGTTTTGTGCTTCCTCATTTTATTTCCACGAAGGCTGTG-CCCAACC-----CTAGCCT-T-GGTGAG-----CCGTGACCCAGCCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084489 104 + 62195757 CTGATTTTGTTTTGGCTGGCTTATTTAGAGTTTTGTGCCTCCTCATTTTATTTCCACGAAGGCTGTG-CCCAACC-----CTAGCCT-T-GGTGAG-----CCGTGACCCAGCCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469720 104 - 578057 CTGATTTTGTTTTGGCTGGCTTATTCAGAGTTTTGTGCTTCCTCATTTTATTTCCACGAAGGCTGTG-CCCAACC-----CTAGCCT-C-GGTGAG-----CCATGACCCAGCCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998577 104 - 110113093 CTGATTTTGTTTTGGCTGGCTTATTTAGAGTTTTGTGCTTCCTCATTTTATTTCCATGAAGGCTGTG-CCCAACC-----CTAGCCT-C-GGTGAG-----CCATGACCCAGTCATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724661 104 - 92844088 CTGATTTTGTTCTGGCTGGCTTATTTAGAGTTTTGTGCTTCCTCATTTTATTTCCATGAAGGCCATG-CCCAACC-----CTTGCCT-T-GGTGAG-----CCATGACCCAGCCATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392642 104 + 96509753 CTGATTTTGTTCTGGCTGGCTTATTTAGAGTTTTGTGCTTCCTCATTTTATTTCCACGAAGGCCATG-CCCAACC-----CTTGCCT-T-GGTGAG-----CCATGACCCAGCCATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16863953 104 - 16982598 CTGATTTTGTTCTGGCTGGCTTATTTAGAGTTTTGTGCTTCCTCATTTTATTTCCACGAAGGCCATG-CCCAACC-----CTTGCCT-T-GGTGAG-----CCATGACCCAGCCATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665082 104 - 3785965 CTGATTTTGTTCTGGCTGGCTTATGTAGAGTTTTGTGCTTCCTCATTTTATTTCCACGAAGGCCATG-CCCAACC-----CTAGCCT-T-GGTGAG-----CCATGACCCAGCCATG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50211 104 - 179258 CTGATTTTGTTCTGGCTGGCTTATGTAGAGTTTTGTGCTTCCTCATTTTATTTCCACGAAGGCCATG-CCCAACC-----CTAGCCT-T-GGTGAG-----CCATGACCCAGCCATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5535993 104 - 5823884 CTGATTTTGTTTTGGCTGGCTTATTTAGAGTTTTGTGCTTCCTCATGTTATTTCCACGAAGGCCATG-CCCAACC-----CTAGCCT-T-GGTGAG-----CCATGACCCAGCCATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 18963 99 + 372756 CTGA-----TTTTGAACAGGTTATTTAGAGTTTTGTGCTACCTTGTTTTATTTCTGCAAAGGCCATG-CCCAACC-----CTAGCCT-T-GGTGAG-----TTGTGACCCAGCCATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16256965 104 + 16356641 CCGATTTTGTTTTGAGTGGGTTATTTAGAGTTTTGTGCTACCTTGTTTTATTTCCACAAAGGCCATG-CCCAAGC-----CTAGCCT-T-GGTGAG-----TTATGACCCAGCCATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125682 104 + 1231380 CTGATTTTGTTTTGAACAGGTTATTTAGAGCTTTGTGCTTCCTTGTTTTATTTCCGCAGAGGCCATG-CCCAACC-----CCAGCCT-T-GGTGAG-----TTGTGACCCAGCCATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2654523 104 + 11732439 CTGATTTCGTTTCGAATGGGTTATTTAGAGTTTTGTGCTACCTTGTTTTATGTCCACAGAGGCCGTG-CCCCACC-----CTAGCCT-T-GGCGAG-----TGATGACCCAGCCGTG i aotNan1.NW_018500483v1 I 129 C 0 s otoGar3.GL873542 22820739 108 + 22939663 CTGATTTTGCTTCAGCTAGATTATTTAGAGATTCGTGTTACCTCATTTTATTTCTGTGGCGGCCACA-CCCAACC-----CTAGCCT-T-GGTGAAACTCTCCTTGGGTCAAG-ATG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47582819 105 + 47698779 CTGACTTTGTTCTGGCGAGATGGCTTAGGTTTCCGTGTGATCT-AGTTTATGGATGTGAAGCCCAGGCCCCAACT-----CCAGCCTCT-GGGGCT-----GCTTGGGCCTCTCGTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 221157 97 - 397369 TGGATTTTGTTTTGTCTAGATTATGCAGCGATTTGTGTGTCCT-------------CGAAGGCTGCA-CTCTGGTGCTAGCTAGCCT-TCAGGGTG-----TCCGGACCCAGCCATG i dasNov3.JH569290 C 0 I 1888 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I a score=150364.000000 s hg38.chr20_KI270870v1_alt 79366 18 + 183433 TCACCGATGCGTCAAAGT s panTro5.chr20 133773 18 - 66533130 TCGCCGATGCGTCAAAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084593 18 + 62195757 TCGCCGATGCGTCAAAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469824 18 - 578057 TCACCGATGCATCAAAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998681 18 - 110113093 TCACCAATGCATCAAAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724765 18 - 92844088 TCACCAACGCATCAGAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392746 18 + 96509753 TCACCAACGCATCAAAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864057 18 - 16982598 TCACCAACGCATCAAAGT i macNem1.NW_012014244v1 C 0 I 82 s cerAty1.NW_012001373v1 3665186 18 - 3785965 TCACCAACGCATCAAAGT i cerAty1.NW_012001373v1 C 0 I 78 s manLeu1.NW_012101652v1 50315 18 - 179258 TCACCAACGCGTCAAAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536097 18 - 5823884 TCACCAACGCATCAAAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19062 18 + 372756 TCACTGATGCATCAAAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257069 18 + 16356641 TCACTGATGCATCGGAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125786 18 + 1231380 TCACCGAGGTGTCAGAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2654627 18 + 11732439 TCACTGATGCATCAAAGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22820847 18 + 22939663 TTGCTGACGCATCGGAAT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47582924 9 + 47698779 -CACCGAAGC-------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=287281.000000 s hg38.chr20_KI270870v1_alt 79384 39 + 183433 GGGTTGGCTGTGAGGCATTCATTC-TCTCCCCATGACACA s panTro5.chr20 133791 39 - 66533130 GGGTTGGCTGTGAGGCGTTCGTTC-CCTCCCCATGACACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084611 39 + 62195757 GGGTTGGCTGTGAGGCGTTCGTTC-CCTCCCCATGACACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469842 39 - 578057 GGGTTGGCTGTGAGGCGTTCGTTC-CCTCCCCATGACACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998699 39 - 110113093 GTGTTGGCTGTGAGGCGTTCGTTC-CCTCCCCACGACACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724783 38 - 92844088 -GGTTGGCTGTGAGGTGTTTGTTC-CCTCCCCATGACACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392764 38 + 96509753 -GGTTGGCTGTGAGGTGTTTGTTA-CCTCCCCATGACACA i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 50333 38 - 179258 -GGTTGGCTGTGAGGTGTTTGTTC-CCTCCCCATGACACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536115 39 - 5823884 GGGTTGGCTGTGAGGTGTTTGTTC-CCTCCCCATGGCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19080 39 + 372756 GGGTCCGCTGTGAAGTGTTGGTTC-CCTCCCCATGACACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257087 39 + 16356641 GGGTTGGCTGTGAGGTGTTCGTTC-CCTCCCCATGACACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125804 39 + 1231380 GGGTCGGCTGTGAGGTGTTTGTTC-CCTCCCCATGACACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2654645 39 + 11732439 GGGCTGGCTGTGAGGTGTTCGTTC-CCTCCCCATGACACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22820865 33 + 22939663 -GGTCAGCTATGAGGTGCT------CCTCCTCACAATGCA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47582933 35 + 47698779 AGGTTAACGGGGAGG-----GTTCTCCTCCCCACAGCACA i canFam3.chr24 C 0 I 178 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e cerAty1.NW_012001373v1 3665204 78 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e macNem1.NW_012014244v1 16864075 82 - 16982598 I a score=51594.000000 s hg38.chr20_KI270870v1_alt 79423 8 + 183433 GATAGACA s panTro5.chr20 133830 8 - 66533130 GATAGACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084650 8 + 62195757 GATAGACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469881 8 - 578057 GATAGACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998738 8 - 110113093 GATAGACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724821 8 - 92844088 CATAGACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392802 8 + 96509753 CATAGACA i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 50371 8 - 179258 CATAGACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536154 8 - 5823884 CACAGACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19119 8 + 372756 CACAGACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257126 8 + 16356641 CACAGACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125843 8 + 1231380 CACAGACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2654684 8 + 11732439 CACAGACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22820898 8 + 22939663 CATGGACA i otoGar3.GL873542 C 0 I 14 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e cerAty1.NW_012001373v1 3665204 78 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e macNem1.NW_012014244v1 16864075 82 - 16982598 I a score=17262.000000 s hg38.chr20_KI270870v1_alt 79431 3 + 183433 AAT s panTro5.chr20 133838 3 - 66533130 AAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084658 3 + 62195757 AAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469889 3 - 578057 AAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998746 3 - 110113093 AAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724829 3 - 92844088 AAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96392810 3 + 96509753 AAT i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 50379 3 - 179258 AAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536162 3 - 5823884 AAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19127 3 + 372756 AAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257134 3 + 16356641 TGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1125851 3 + 1231380 AAT i cebCap1.NW_016107870v1 C 0 I 180 s aotNan1.NW_018500483v1 2654692 3 + 11732439 AAT i aotNan1.NW_018500483v1 C 0 I 180 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e cerAty1.NW_012001373v1 3665204 78 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e macNem1.NW_012014244v1 16864075 82 - 16982598 I e otoGar3.GL873542 22820906 14 + 22939663 I a score=5925.000000 s hg38.chr20_KI270870v1_alt 79434 3 + 183433 -TGG s panTro5.chr20 133841 3 - 66533130 -TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084661 3 + 62195757 -TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469892 3 - 578057 -TGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998749 3 - 110113093 -TGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92724832 3 - 92844088 -TGG i rheMac8.chr10 C 0 I 484 s macFas5.chr10 96392813 3 + 96509753 -TGG i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 50382 3 - 179258 -TGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536165 3 - 5823884 -TGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19130 3 + 372756 GTG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257137 3 + 16356641 GTG- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e cerAty1.NW_012001373v1 3665204 78 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e macNem1.NW_012014244v1 16864075 82 - 16982598 I e cebCap1.NW_016107870v1 1125854 180 + 1231380 I e aotNan1.NW_018500483v1 2654695 180 + 11732439 I e otoGar3.GL873542 22820906 14 + 22939663 I a score=13564.000000 s hg38.chr20_KI270870v1_alt 79437 38 + 183433 TCatatatatatatatatatatatatatatatatatat s panTro5.chr20 133844 38 - 66533130 TCCtatatgtatatatatatatatatatattttttttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084664 38 + 62195757 TCCtatatatatatatatatatatatattttttttttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469895 23 - 578057 TCCAATATATGTATATATAt---------------ttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998752 38 - 110113093 TCCTAGatatatatatatatatatatatatatatatat i nomLeu3.chr13 C 0 I 37 s macFas5.chr10 96392816 22 + 96509753 -CCCA---------------Attttttttttttttttt i macFas5.chr10 C 0 I 6 s manLeu1.NW_012101652v1 50385 22 - 179258 -CCCA---------------Attttttttttttttttt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536168 22 - 5823884 -CCCA---------------Attttttttttttttttt i colAng1.NW_012114444v1 C 0 I 6 s calJac3.chrUn_GL286459 19133 20 + 372756 TCCAA---------------TTATAtttt---attttt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257140 23 + 16356641 TCCAA---------------ttttttttttaaattttt i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e cerAty1.NW_012001373v1 3665204 78 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e macNem1.NW_012014244v1 16864075 82 - 16982598 I e cebCap1.NW_016107870v1 1125854 180 + 1231380 I e aotNan1.NW_018500483v1 2654695 180 + 11732439 I e rheMac8.chr10 92724835 484 - 92844088 I e otoGar3.GL873542 22820906 14 + 22939663 I a score=-5366.000000 s hg38.chr20_KI270870v1_alt 79475 46 + 183433 agagagagagagagagagagagagagagagagagagagagagagag s panTro5.chr20 133882 5 - 66533130 -----------------------------------------ttttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084702 2 + 62195757 --------------------------------------------tt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469918 2 - 578057 --------------------------------------------tt i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e cerAty1.NW_012001373v1 3665204 78 - 3785965 I e colAng1.NW_012114444v1 5536190 6 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 50407 0 - 179258 C e saiBol1.JH378156 16257163 0 + 16356641 C e macNem1.NW_012014244v1 16864075 82 - 16982598 I e cebCap1.NW_016107870v1 1125854 180 + 1231380 I e calJac3.chrUn_GL286459 19153 0 + 372756 C e aotNan1.NW_018500483v1 2654695 180 + 11732439 I e nomLeu3.chr13 109998790 37 - 110113093 I e rheMac8.chr10 92724835 484 - 92844088 I e otoGar3.GL873542 22820906 14 + 22939663 I e macFas5.chr10 96392838 6 + 96509753 I a score=627.000000 s hg38.chr20_KI270870v1_alt 79521 1 + 183433 a s panTro5.chr20 133887 1 - 66533130 t i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084704 1 + 62195757 t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469920 1 - 578057 t i gorGor5.CYUI01015848v1 C 0 C 0 s macNem1.NW_012014244v1 16864157 1 - 16982598 t i macNem1.NW_012014244v1 I 82 C 0 s calJac3.chrUn_GL286459 19153 1 + 372756 t i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257163 1 + 16356641 t i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e cerAty1.NW_012001373v1 3665204 78 - 3785965 I e colAng1.NW_012114444v1 5536190 6 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 50407 0 - 179258 C e cebCap1.NW_016107870v1 1125854 180 + 1231380 I e aotNan1.NW_018500483v1 2654695 180 + 11732439 I e nomLeu3.chr13 109998790 37 - 110113093 I e rheMac8.chr10 92724835 484 - 92844088 I e otoGar3.GL873542 22820906 14 + 22939663 I e macFas5.chr10 96392838 6 + 96509753 I a score=693522.000000 s hg38.chr20_KI270870v1_alt 79522 149 + 183433 gagacggagtcttgctctgttggcctggctggagtgcagtggcgccttcttgg----ctgcaacctccgcctccgggttcaa-gcaattccgtctgcctcagtctcccaagtagctgggactgcagatgcgtgccacc-aagtc-tgg-ctaatttt s panTro5.chr20 133888 143 - 66533130 gagacggagtcttgctctgttgcccaggctggagtgcagtggcgcc-tctcgg----ctgcaacctccgcctc--ggttcaa-gcaattccgtctgcctcagtctcccaagtagctgggactgcagatg-gtg-cacc-aagt--tgg-ctaatttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084705 152 + 62195757 gagacggagtcttgctctgttgcccaggctggagtgcagtggcgccttctcgg----ctgcaacctccgcctctgggttcaa-gcaattccgtctgcctcagtctcccaagtagctgggactgcagatgcgtgccacctaagtcttggtctaatttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 469921 149 - 578057 gagacggagtcttgctctgttgcccaggctggagtgcagtggcgccttctggg----ctgcaacctctgcctccaggttcaa-gcgattctgtctgcctcagtctcccgagtagctgggactgcagatgcgtgccacc-aagtc-tgg-ctaatttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998827 149 - 110113093 gagacagagtcttgctctgttgcccaggcaggaatgcagtggcgccatctcag----ctgcaacctctgcctccgggttcaa-gcaattctctctgcctcagtctcccgagtagctgggactgcagatgcgtgccacc-acgcc-tgg-ctaatttt i nomLeu3.chr13 I 37 C 0 s macFas5.chr10 96392844 150 + 96509753 gagatggcgtcttgctctgtcgcccaggctggagtgcagtggcgccatctcgg----ctgcaacctccgcctccaggttcaaggcaattctgtctacctcagcctcccgagtagctgggactgcaggtgtgtgccacc-acgcc-tgg-ctaatttt i macFas5.chr10 I 6 I 303 s macNem1.NW_012014244v1 16864158 150 - 16982598 gagatggcgtcttgctctgtcgcccaggctggagtgcagtggcgccatctcgg----ctgcaacctccgcctccaggttcaaggcaattctgtctacctcagcctcccgagtagctgggactgcaggtgtgtgccacc-acgcc-tgg-ctaatttt i macNem1.NW_012014244v1 C 0 I 2 s cerAty1.NW_012001373v1 3665282 150 - 3785965 gagatggcatctggctctgtcgcccaggctggagtgtagtggcgccatctcgg----ctgcaacctccgcctccaggttcaaggcaattctgtctgcctcagcctcccgagtagctgggactgcaggtgtgtgccacc-acgcc-tgg-ctaatttt i cerAty1.NW_012001373v1 I 78 C 0 s manLeu1.NW_012101652v1 50407 150 - 179258 gagatggcgtcttgctctgtcgcccaggctggagtgcagtggcgccatctcgg----ctgcaacctccgcctccaggttcaaggcaattctgtctgcctcagcctcccgagtagctgggactgcaggtgtgtgccacc-acgcc-tgg-ctaatttt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536196 149 - 5823884 gagatggcatcttgctctgtcacccaggctggagtgcagtggcgccatcttgg----ctgcaacctctgcctccaggttcaa-gcaattctgtctgcctcagcctcctgagtagctgggactgcaggtgtgtgccacc-atgcc-tgg-ctaatttt i colAng1.NW_012114444v1 I 6 C 0 s calJac3.chrUn_GL286459 19154 151 + 372756 cagatggagtcttgctctgtcacccagg-tggagtgcagtggggtgatctcagctcactgcaacctctgcctgtgggttcag-gcgattct-cctgcctcagcctctggagtatctgggattgcaggtacatgccact-attcccggg-ctaattc- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257164 152 + 16356641 gagatggagtcttgctctgtcacccaggctggagtgcagtggggtgatctcagctcactgcaacctctgcctctgggttcaa-gcgattct-cctgtctcagcctccggagtagctgggattgcaggtacatgccact-attcccagg-ctaattc- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e cebCap1.NW_016107870v1 1125854 180 + 1231380 I e aotNan1.NW_018500483v1 2654695 180 + 11732439 I e rheMac8.chr10 92724835 484 - 92844088 I e otoGar3.GL873542 22820906 14 + 22939663 I a score=1380.000000 s hg38.chr20_KI270870v1_alt 79671 10 + 183433 tgtatttttt s panTro5.chr20 134031 6 - 66533130 tgta----tt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084857 10 + 62195757 ttgaagtttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470070 8 - 578057 tgta--tttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998976 5 - 110113093 tgta-----t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725319 10 - 92844088 tgtatttttt i rheMac8.chr10 I 484 C 0 s macFas5.chr10 96393297 10 + 96509753 tgtatttttt i macFas5.chr10 I 303 C 0 s macNem1.NW_012014244v1 16864310 10 - 16982598 tatttttttt i macNem1.NW_012014244v1 I 2 C 0 s cerAty1.NW_012001373v1 3665432 8 - 3785965 --tgtatttt i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50557 8 - 179258 --tgtatttt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536345 10 - 5823884 tgcatttttt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19305 4 + 372756 tgta------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257316 4 + 16356641 tgta------ i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e cebCap1.NW_016107870v1 1125854 180 + 1231380 I e aotNan1.NW_018500483v1 2654695 180 + 11732439 I e otoGar3.GL873542 22820906 14 + 22939663 I a score=1226153.000000 s hg38.chr20_KI270870v1_alt 79681 151 + 183433 ttttttttaac-agagatggggttttgccatgttggcgaggctggtc-ttgaactcctgacctcaggtgatctgc-ctgcctccgcctcccaaagtgctggtattacaggtgtgagccactgtgcccggccAAATTTACCCAATTTTTAAGAGT s panTro5.chr20 134037 151 - 66533130 ttttttttaac-agagatggggttttgccatgttggcgaggctggtctttgaactcctgacctcaggtgatctgcgctgcctccgcct-ccaaagtgctggtattacaggcatgag-cactgtgcccggccAAATTTACCCAATTTTTAAGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62084867 152 + 62195757 ttttttttaactagagatggggttttgccatgttggcgaggctggtc-ttgaactcctgacctcaggtgatctgc-ctgcctccgcctcccaaagtgctggtattacaggcatgagccactgtgcccggccAAATTTACCCAATTTTTAAGAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470078 151 - 578057 ttttttttaac-agacatggggttttgtcatgttggcgaggctggtc-ttgaactcctgacctcaggtgatctgc-ctgcctccgcctcccaaagtgctggtattacaggcgtgagccactgtgcccggccAAATTTACCCAATTTTTAAGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109998981 151 - 110113093 ttttttttagc-agagatggggttttgccatgttggcaaggctggtc-ttgaactcctgacctcaggtgatctgc-ccacctcagcctcccaaagtgctggtattacaggcgtgagccactgtgcccggccAAATTTGCCCAGTTTTTAAGAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725329 151 - 92844088 ttttttttagt-agagatggggttttgccatgttgaccgggctggtc-tcgaactcctcacctcaggtgatctgc-ccgcctcagcctcccaaagtgctggtgtcacaggcgtgagccacggtgcccggcTAAATTTGCCCAATTTTTACGAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393307 151 + 96509753 ttttttttagt-agagatggggttttgccatgttgaccgggctggtc-tcgaactcctcacctcaggtgatctgc-ccgcctcagcctcccaaagtgctggtgtcacaggcgtgagccacggtgcccggcTAAATTTGCCCAATTTTTACGAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864320 151 - 16982598 ttttttttagt-agagatggggttttgccatgttgaccgggctggtc-tcgaactcctcacctcaggtgatctgc-ccgcctcagcctcccaaagtgctggtgtcacaggcgtgagccacggtgcccggcTAAATTTGCCCAATTTTTACGAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665440 151 - 3785965 ttttttttagt-agagatggggttttgccatgttgaccaggctggtc-tcgaactcctcacctcaggtgatctgc-ccgcctcagcctcccaaagtgctggtgtcacaggcgtgagccacggtgcccggcTAAATTTGCCCAATTTTTACGAGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50565 151 - 179258 ttttttttagt-agagatggggttttgccatgttgaccaggctggtc-tcgaactcctcacctcaggtgatctgc-ccgcctcagcctcccaaagtgctggtgtcacaggcgtgagccacggtgcccggcTAAATTTGCCCAATTTTTACGAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536355 151 - 5823884 ttttttttagt-agagatggggttttgccatgttgaccaggctggtc-tcgaactcctcacctcaggtgatctgc-ctgcctcagcctcccaaagtgctggtgttacaggcgtgagccactgtgcccACCTAAATTTGCCCAATTTTTAAGAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19309 147 + 372756 -ttttttaagt-agagatgggtttttgcca---cggtcaggctagtc-ttgaactcctgacctcagatgatctgc-ctgccttggcctcccaaagtgctgggattacaggtgtgagctaccatgcctggccTAATTTGCCCAGTTTTTAAGAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257320 150 + 16356641 -tttttttagt-acagatgggtttttgccatgttggtcaggctggtc-ttgaactcctgacctcagatgatctgc-ccgccttggcctcccaaagtgctgggattacaggcgtgagccaccatgcctggccTAATTTGCCCCATTTTTAAGAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1126034 151 + 1231380 ttttttttagt-agagttgggtttttgccatgttggtcaggctggtc-ttgaactcctgacctcagatgatctgc-ccgccttggcctcccaaagtgctgggattacaggcgtgagctaccatgtctggccTAATTTGCCCAGTTTTTAAGAGT i cebCap1.NW_016107870v1 I 180 C 0 s aotNan1.NW_018500483v1 2654875 150 + 11732439 ttttttttagt-agagatgggtttttg-catgttggtcaggctggtc-ttgaattcctgacctcagatgatctgc-cctcatcggcctcccaaagtgctgggattacaggtgtgagctaccgtgcctggccTAATTTGCCCAGTTTTTTAGAGT i aotNan1.NW_018500483v1 I 180 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22820906 14 + 22939663 I a score=1024148.000000 s hg38.chr20_KI270870v1_alt 79832 154 + 183433 TATGACGTGCTGCAAGCTTGCTGCCTTCCCTCATCCAGCGGTAAGTCCT-----GTAAGGAGTCTGCTTCCTAGGTGCATCAGCCAGATAGGGAAAACAAAG-GGATTTGTTACTGAATGGCATTCAGGGAAGCAAT-CCCTAGAAGGCTGCCTGGAGCCT s panTro5.chr20 134188 153 - 66533130 TATGA-GTGCTGCAAGCTTGCTGCCTTCCCTCATCCAGCGGTAAGTCCTGTAA-GTAAGGAGTCTGCTTCCTAGGTGCATCAGCCAGATAGGG-AAACAAAG-GGATTTGTTACTGAATGGCATTCAGGGAAGCAAT--CCTAGAA-GCTGCCTGG-CCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085019 158 + 62195757 TATGAGATGCTGCAAGCTTGCTGCCTTCCCTCATCCAGCGGTAAGTCCTGTAA-GTAAGGAGTCTGCTTCCTAGGTGCATCAGCCACATAGGGAAAACAAAG-GGATTTGTTACTGAATGGCATTCAGGGAAGCAAT-CCCTAGAAGGCTGCCTGGAGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470229 158 - 578057 TATGAGGTGCTGCGAGCTTGCTGCCTTCCCTCATCCAGCGGTAAGTCCTGTAA-GTAAGGAGTCTGCTTCCTAGGTGCATCAGCCAGATAGGGAAAACAAAG-GGATTTGTTACTGAATGGCATTCAGGGAAGCAAT-CCCTAGAAGGCTGCCTGGAGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999132 135 - 110113093 TATGAGGTGCTGTGAGCTTGCTGCCTTCCCTCATCTAGCGTTAAGTCCTGTAA-GCAGAGAGTCTGCTTCCTAGGTGCATCTGCCAGAGAGGGAAAACAAAGTGGATTTGTTACTGAGTGGCATTCAGGGAAGCAA------------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725480 159 - 92844088 TATGAGGTGCTGTGAGCTTGCTGCCTTCCCTTATCTAGCGGTAAGTCCTGTAA-GTAGGGAGTCGACTTCCCAGGTGCATCAGCCTGACAGGAAAGACAAAGTGGCTCTGTTGCCGAGTGGCATTCAGGGAAGCCGT-CCCTAGGAGGCTGCCTGGAGCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393458 159 + 96509753 TATGAGGTGCTGTGAGCTTGCTGCCTTCCCTTATCTAGCGGTAAGTCCTGTAA-GTAGGGAGTCGACTTCCCAGGTGCATCAGCCAGACAGGAAAGACAAAGTGGCTCTGTTGCCGAGTGGCATTCAGGGAAGCCGT-CCCTAGGAGGCTGCCTGGAGCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864471 159 - 16982598 TATGAGGTGCTGTGAGCTTGCTGCCTTCCCTTATCTAGCGGTAAGTCCTGTAA-GTAGGGAGTCGACTTCCCAGGTGCATCAGCCAGACAGGAAAGACAAAGTGGCTCTGTTGCCGAGTGGCATTCAGGGAAGCCGT-CCCTAGGAGGCTGCCTGGAGCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665591 133 - 3785965 TATGAGGTGCTGTGAGCTTGCTGCCTTCCCTTATCCAGCGGTAAGTCCTGTAA-GTAGGGAGTTGACTTCCCAGGTGCATCAGCCAGACAGGAAAGACAAAGT--------------------------GAAGCCAT-CCCTAGGAGGCTGCCTGGAGCCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50716 133 - 179258 TATGAGGTGCTGTGAGCTTGCTGCCTTCCCTTATCCAGCGGTAAGTCCTGTAA-GTAGGGAGTCGACTTCCCAGGTGCATCAGCCAGACAGGAAAGACAAAGT--------------------------GAAGCCAT-CCCTAGGAGGCTGCCTGGAGCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536506 136 - 5823884 TATGAGGTGCTGGGAGCTTACTGCCTTTCCTCATCCAGCAGTAAGTCCTGTAA-GCAGGGAGTCTACTTCCTAGGTGCATCAGCCAGACGGGAAAAACAAAGTGGCTCTT-----------------------CAGT-CCCTAGCAGGCTGCCTGGAGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19456 159 + 372756 TAAGAGGCGCTGTGAGCTTGCTGCTTTCCCTCATCTGGCAGTAAGTCCTGTAG-GTAGGGAGTCTGCTTCCTAGGTGCACCAGCCAGATGGGAAAAACAAAGTGGGTTTGTTACTGAATGGCA-TCAGGGAAGTAATCCTCTAGAAGGCTGCCTGGAGCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257470 158 + 16356641 TAAGAGGCGCTGTGAGCTTGCTGCCGTCCCTCATCCGGCAGTAAGTCCTGTAG-GCAGGGAGGCTGCTT-CTAGGTGCACCAGCCAGATGGGAAAAATGAAATGGATTTGTTACTGAGTGGTG-TCAGGGAAGCAGTCCCCTAGAATGCTGCCTAGAGCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1126185 158 + 1231380 TAAGAGGCGCTGTGAGTTT-CTGCCGTCTGTCATCTGGCAGTAAGTCCTGTAG-GTAGGGAGTCTGCTTCCTAGGTGCACCAGCCACATGGGAAAAACGAAGTGGATTTGTTCCTGAATGGTG-TCAGGGAAGCAATCCCCCGGAAGGCTGCCTGGAGCCT i cebCap1.NW_016107870v1 C 0 I 462 s aotNan1.NW_018500483v1 2655025 152 + 11732439 TAAGAGGCGCTGTGAGCCT-------CCCCTCATCCGGCAGTAAGTCCTGTCG-CGAGGGAGTCTGCTTCCTAGGTGCACCAGGCAGATGGGAAAAACAAAGTGGGTTTGTTACTGAATGGCA-TCAGGGAAGCAATCCCCTAGAAGGCTGCCTGGAGCCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22820920 132 + 22939663 TGTGAGGAGCTGTGAGTGGGCAGTCTTCTCTCATCCA-TGGTGCCTCCTATAAGGTCAGGTGTCTAATTGCCAGGTGCATAATTTGGAGGAGAAAAGAAAAG-TAATTTGTT-----------------TGAGCTCT----------GTCACCTGGACCTT i otoGar3.GL873542 I 14 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=85642.000000 s hg38.chr20_KI270870v1_alt 79986 23 + 183433 GTCTCGGGGAA-TCCGTTCCAGGA s panTro5.chr20 134341 24 - 66533130 GTCTCGGGGAATTCTGTTCCAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085177 23 + 62195757 GTCTCGGGGAA-TCTGTTCCAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470387 23 - 578057 GTCTCGGGGAA-TCCGTTCCAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999267 15 - 110113093 --------GAA-TCAATTCCAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725639 22 - 92844088 ATCCCGGGG-A-TCAGCTCCAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393617 22 + 96509753 ATCCCGGGG-A-TCAGCTCCAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864630 22 - 16982598 ATCCCGGGG-A-TCAGCTCCAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665724 22 - 3785965 ATCCCGGGG-A-TCAGCTCCAGGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50849 22 - 179258 ATCCCGGGG-A-TCAGCTCCAGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536642 23 - 5823884 GTCTCGGGGAA-TCAGCTCCAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19615 6 + 372756 GTCTTG------------------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257628 22 + 16356641 GTCTTGGGG-A-TCAGCTCGAGGA i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2655177 22 + 11732439 GTCTTGGGG-A-TCAGCTCTAGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22821052 22 + 22939663 GTCAGAAGG-A-ATTGTACCAGGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1833589 427 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e cebCap1.NW_016107870v1 1126343 462 + 1231380 I a score=200912.000000 s hg38.chr20_KI270870v1_alt 80009 28 + 183433 CTCTGGGCCCTGCACCTC----------TTCCCTGTGG s panTro5.chr20 134365 27 - 66533130 CTCTGGGCTCTGCACCTC----------TT-CCTGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085200 28 + 62195757 CTCTGGGCCCTGCACCTC----------TTCCCTGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470410 28 - 578057 CTCTGAGCCCTGCACCTC----------TTCCCTGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999282 28 - 110113093 CTCTGGGACCTGCACCTC----------TTCCCTGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725661 38 - 92844088 CTCTGGGCCCTACACCCCTTCCCTGTGGTTCCCTGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393639 38 + 96509753 CTCTGGGCCCTACACCCCTTCCCTGTGGTTCCCTGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864652 38 - 16982598 CTCTGGGCCCTACACCCCTTCCCTGTGGTTCCCTGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665746 38 - 3785965 CTCTGGGCCCTACACCCCTTCCCTGTGGTTCCCTGTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50871 38 - 179258 CTCTGGGCCCTACACCCCTTCCCTGTGGTTCCCTGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536665 28 - 5823884 CTCTGGGCCCTACACCTC----------TTCCCTGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19621 23 + 372756 ----GGGCCCTGCCCCTC----------TTCCCTGT-G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257650 28 + 16356641 CTCTGGGCCCTGCCCCTC----------CACCCTGCAG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2655199 28 + 11732439 CTCTGGGCCCCACCCCCC----------TTCCCTGCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1834016 28 - 2029793 CTCTGGGCCCTGCTCCTC----------TTCCCTGTGG i proCoq1.NW_012150197v1 I 427 I 342 s otoGar3.GL873542 22821074 27 + 22939663 CTCTTGTTCCTGTGCCTCT---------TTCCTTGT-- i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47582968 178 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e cebCap1.NW_016107870v1 1126343 462 + 1231380 I a score=15022.000000 s hg38.chr20_KI270870v1_alt 80037 3 + 183433 -AGT s panTro5.chr20 134392 3 - 66533130 -AGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085228 3 + 62195757 -AGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470438 3 - 578057 -AGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999310 3 - 110113093 -AGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725699 3 - 92844088 -AGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393677 3 + 96509753 -AGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864690 3 - 16982598 -AGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665784 3 - 3785965 -AGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50909 3 - 179258 -AGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536693 3 - 5823884 -AGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19644 3 + 372756 -AGC i calJac3.chrUn_GL286459 C 0 I 22 s saiBol1.JH378156 16257678 3 + 16356641 -AGC i saiBol1.JH378156 C 0 I 22 s aotNan1.NW_018500483v1 2655227 3 + 11732439 -AGC i aotNan1.NW_018500483v1 C 0 I 22 s otoGar3.GL873542 22821101 3 + 22939663 GGG- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e cebCap1.NW_016107870v1 1126343 462 + 1231380 I a score=95527.000000 s hg38.chr20_KI270870v1_alt 80040 15 + 183433 GTCACCCACACCGGT s panTro5.chr20 134395 15 - 66533130 GTCACCCACACCGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085231 15 + 62195757 GTCACCCACACCGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470441 15 - 578057 GTCACCCACGCCGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999313 15 - 110113093 GTCATCCACACCAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725702 14 - 92844088 GTCATCCAC-CTGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393680 14 + 96509753 GTCATCCAC-CTGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864693 14 - 16982598 GTCATCCAC-CTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665787 14 - 3785965 GTCATCCAC-CTGGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50912 14 - 179258 GTCATCCAC-CTGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536696 14 - 5823884 GTCATCCAC-CTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19669 15 + 372756 ATCATCCACACTGGT i calJac3.chrUn_GL286459 I 22 C 0 s saiBol1.JH378156 16257703 15 + 16356641 GTCATCCACACGGGT i saiBol1.JH378156 I 22 C 0 s cebCap1.NW_016107870v1 1126805 15 + 1231380 GTCATCCACACTGGC i cebCap1.NW_016107870v1 I 462 C 0 s aotNan1.NW_018500483v1 2655252 15 + 11732439 GTCATCCACACGGGT i aotNan1.NW_018500483v1 I 22 C 0 s otoGar3.GL873542 22821104 14 + 22939663 GCTGTCCAC-GCAGA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47582968 178 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=882090.000000 s hg38.chr20_KI270870v1_alt 80055 98 + 183433 GGCCTGGGCTTT-----GTCTGGCTGCAAATCGCACATGCGGCTTCTAA-GTCAGAACCTGCTGCTGGATG----TGGAGCTCCCTTCATCCCCAGGGTCTGAGCCTT s panTro5.chr20 134410 97 - 66533130 GGCCTGGGCTTT-----GTCTGGCTGCAAATCGCACATGCGGCTTCTAACGTCAGAACCTGCTGCTGGATG----TGGAGCTCCC-TCGTCCCCAGGG-CTGAGCCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085246 98 + 62195757 GGCCTGGGCTTT-----GTCTGGCTGCAAATCGCACATGCGGCTTCTAA-GTCAGAACCTGCTGCTGGATG----TGGAGCTCCCTTCGTCCCCAGGGTCTGAGCCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470456 98 - 578057 GGCCTGGGCTTT-----GTCTGGCTGCAAATCGCACATGCGGCTTCTAA-GTCAGAACCTGCTGCTGGATG----TGGAGCTCCCTTCATCCCCAGGGTCTGAGCCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999328 97 - 110113093 GGCCTGGGC-TT-----GTCTGGCTGCAAATCGCACATGCAGCTTCTAA-GTCAGAACCTGCTACTGGATG----TAGAGCTCCCTTCATCCCCAGGGTCTGAGCCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725716 97 - 92844088 GACCTGGGC-TT-----GTCTGGCTGCAAATCGCAGATGCAGCTTCTAA-GTCAGAACCTGCTACTGGATG----TGGAGCTGCCTTCATCCCCAGGGTCTGAGCCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393694 97 + 96509753 GACCTGGGC-TT-----GTCTGGCTGCAAATCGCAGATGCAGCTTCTAA-GTCAGAACCTGCTACTGGATG----TGGAGCTGCCTTCATCCCCAGGGTCTGAGCCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864707 97 - 16982598 GACCTGGGC-TT-----GTCTGGCTGCAAATCGCAGATGCAGCTTCTAA-GTCAGAACCTGCTACTGGATG----TGGAGCTGCCTTCATCCCCAGGGTCTGAGCCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665801 97 - 3785965 GACCTGGGC-TT-----GTCTGGCTGCAAATCGCAGATGCAGCTTCTAA-GTCAGAACCTGCTACTGGATG----TGGAGCTCCCTTCATCCCCAGGGTCTGAGCCTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 50926 97 - 179258 GACCTGGGC-TT-----GTCTGGCTGCAAATCGCAGATGCAGCTTCTAA-GTCAGAACCTGCTACTGGATG----TGGAGCTCCCTTCATCCCCAGGGTCTGAGCCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536710 97 - 5823884 GACCTGGGC-TT-----GTCTGGCTGCAAATCGCAGATGCAGCTTCTAA-GTCAGAAACTGCTACTGGATG----TGGAGCTCCCTTCATCCCCAGGGTCTGAGCCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19684 101 + 372756 GGCCTGGGC-TT-----GTCTGGCTGCAAATCGCACCTGCAGCTTCTAA-GTCAGAACCTGCTACTGGATGTGGATGGAGCTCCCTCCATCTCCAGGGTCTCAGCCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257718 101 + 16356641 GGCCTGGGC-TT-----GCCTGGCTGCAGATCGCACCTGCAGCTTCTAA-GTCAGAACCTGCTACGGGATGTGGATGGAGCTCCCTTCATCTGCAGGGTCTGAGCCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1126820 101 + 1231380 AGCCTGGGC-TT-----CTCTGGCTGCAGGTCGCACCTGCAGCTTCTAA-GTAAGAACCTGCTACGGGATGTGGATGGAGCTCCCTTCATCTCCAGGGTCTGAGCCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655267 101 + 11732439 GGCCTGGGC-TT-----GTCTGGCTGCAAATCGCACCTGCAGCTTCTAA-GTCAGAACCTGCTATTGTATGTGGATGGAGCTCCCTTCATCTCCAGGGGCTGAGCCTT i aotNan1.NW_018500483v1 C 0 I 12 s otoGar3.GL873542 22821118 80 + 22939663 GGCTGGTGC-CT-----GCTTGGCTGCAG-TCATGTGGGTAGCTCTCAA-GTGAGAGCTTACTGCCTGGCC----AGG----------------AGGAGCTGAGCCTT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47583146 100 + 47698779 GGCCCCGGC-TTTGCCCGCCTGGCCGCTAATCACAGGTTTGGCTCCGGG-TTCGGGACCTGCTGCTG--TG----TGGCCCTCCCGTCACGGCCCGCGTCTGGGCTCC i canFam3.chr24 I 178 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=81982.000000 s hg38.chr20_KI270870v1_alt 80153 11 + 183433 TGTCCTTGGCT s panTro5.chr20 134507 10 - 66533130 TGTCCTTGG-T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085344 11 + 62195757 TGTCCTTGGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470554 11 - 578057 TGTGCTTGGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999425 11 - 110113093 TGTGCTTGGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725813 11 - 92844088 TGTGCTTGGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393791 11 + 96509753 TGTGCTTGGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864804 11 - 16982598 TGTGCTTGGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665898 11 - 3785965 TGTGCTTGGCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51023 11 - 179258 TGTGCTTGGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536807 11 - 5823884 TGTGCTTGGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19785 11 + 372756 CAGGCTTGGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257819 11 + 16356641 CATGCTTGGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1126921 11 + 1231380 CATGCTTGGCT i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22821198 10 + 22939663 -GTGCTCACTC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47583246 11 + 47698779 CGCGCTTGGCT i canFam3.chr24 C 0 I 6 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e aotNan1.NW_018500483v1 2655368 12 + 11732439 I a score=2646.000000 s hg38.chr20_KI270870v1_alt 80164 1 + 183433 G- s panTro5.chr20 134517 1 - 66533130 G- i panTro5.chr20 C 0 I 222 s panPan2.chr20 62085355 1 + 62195757 G- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470565 1 - 578057 G- i gorGor5.CYUI01015848v1 C 0 I 2 s nomLeu3.chr13 109999436 1 - 110113093 G- i nomLeu3.chr13 C 0 T 3 s rheMac8.chr10 92725824 1 - 92844088 G- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393802 1 + 96509753 G- i macFas5.chr10 C 0 T 3 s macNem1.NW_012014244v1 16864815 1 - 16982598 G- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665909 1 - 3785965 G- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51034 1 - 179258 G- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536818 1 - 5823884 G- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19796 1 + 372756 G- i calJac3.chrUn_GL286459 C 0 T 3 s saiBol1.JH378156 16257830 1 + 16356641 G- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1126932 1 + 1231380 G- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22821208 2 + 22939663 AC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e aotNan1.NW_018500483v1 2655368 12 + 11732439 I a score=4095.000000 s hg38.chr20_KI270870v1_alt 80165 1 + 183433 A s panTro5.chr20 134740 1 - 66533130 A i panTro5.chr20 I 222 C 0 s panPan2.chr20 62085356 1 + 62195757 A i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92725825 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864816 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665910 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51035 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536819 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16257831 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22821210 1 + 22939663 A i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 470566 2 - 578057 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19797 3 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999437 3 - 110113093 T e macFas5.chr10 96393803 3 + 96509753 T a score=-880.000000 s hg38.chr20_KI270870v1_alt 80166 1 + 183433 -C s panTro5.chr20 134741 1 - 66533130 -C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085357 1 + 62195757 -C i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92725826 1 - 92844088 -C i rheMac8.chr10 C 0 I 1 s macNem1.NW_012014244v1 16864817 1 - 16982598 -C i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3665911 1 - 3785965 -C i cerAty1.NW_012001373v1 C 0 I 1 s manLeu1.NW_012101652v1 51036 1 - 179258 -C i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5536820 1 - 5823884 -C i colAng1.NW_012114444v1 C 0 I 1 s otoGar3.GL873542 22821211 1 + 22939663 G- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 470566 2 - 578057 I e saiBol1.JH378156 16257832 0 + 16356641 C e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19797 3 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999437 3 - 110113093 T e macFas5.chr10 96393803 3 + 96509753 T a score=21511.000000 s hg38.chr20_KI270870v1_alt 80167 33 + 183433 CCCTATCCTCTGGCATCTGGAGGAACCCAAACC s panTro5.chr20 134742 33 - 66533130 CCCTAACCTCTGGCATCTGGAGGAACCCAAACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085358 33 + 62195757 CCCTAACCTCTGGCATCTGGAGGAACCCAAACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470568 33 - 578057 CCCTAACCTCTGGCATCTGGAGGAAGCCAAACC i gorGor5.CYUI01015848v1 I 2 C 0 s otoGar3.GL873542 22821212 31 + 22939663 CCTGCCCCTCTGG--TTCGCAGGAAGCCACACC i otoGar3.GL873542 C 0 I 98 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19797 3 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999437 3 - 110113093 T e rheMac8.chr10 92725827 1 - 92844088 I e macFas5.chr10 96393803 3 + 96509753 T a score=1692.000000 s hg38.chr20_KI270870v1_alt 80200 3 + 183433 CTA s panTro5.chr20 134775 3 - 66533130 CTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085391 3 + 62195757 CTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470601 3 - 578057 CTA i gorGor5.CYUI01015848v1 C 0 T 38 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19797 3 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999437 3 - 110113093 T e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I e macFas5.chr10 96393803 3 + 96509753 T a score=-312.000000 s hg38.chr20_KI270870v1_alt 80203 7 + 183433 AC-----------------------------------CCCTA s panTro5.chr20 134778 42 - 66533130 ACCCCTAACCTCTGGCATCTGGAGGAACCCAACCCTACCCTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085394 7 + 62195757 AC-----------------------------------CCCTA i panPan2.chr20 C 0 T 38 s gorGor5.CYUI01015848v1 470566 7 - 578057 AC-----------------------------------CCCTA i gorGor5.CYUI01015848v1 T 38 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19797 3 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999437 3 - 110113093 T e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I e macFas5.chr10 96393803 3 + 96509753 T a score=7626.000000 s hg38.chr20_KI270870v1_alt 80210 28 + 183433 ACCTCTGGCATCTGGAGGAACCCAAACC s panTro5.chr20 134820 28 - 66533130 ACCTCTGGCATCTGGAGGAACCCAAACC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470573 28 - 578057 ACCTCTGGCATCTGGAGGAAGCCAAACC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62085401 38 + 62195757 T e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19797 3 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999437 3 - 110113093 T e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I e macFas5.chr10 96393803 3 + 96509753 T a score=15152.000000 s hg38.chr20_KI270870v1_alt 80238 12 + 183433 CTAACTCCCTAC s panTro5.chr20 134848 12 - 66533130 CTAACTCCCTAC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470601 12 - 578057 CTAACTCCCTAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999434 12 - 110113093 CTGACCCCCTAC i nomLeu3.chr13 T 3 C 0 s macFas5.chr10 96393800 12 + 96509753 CTGACTCCCTAC i macFas5.chr10 T 3 C 0 s calJac3.chrUn_GL286459 19794 12 + 372756 CTGACCCCCTAC i calJac3.chrUn_GL286459 T 3 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62085401 38 + 62195757 T e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=37938.000000 s hg38.chr20_KI270870v1_alt 80250 29 + 183433 ACCTCTGGCATCTGGAGGAACCC-----------------------------------------------------------------------AAACCC s panTro5.chr20 134860 100 - 66533130 ACCTCTGGCATCTGCAGGAAGCCAAACCCTAACCCCTAACCTCTGGCATCTGGAGGAACCAAACCCTAACCCTAACTCTGGCATCTGAGGAACCAAACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085363 29 + 62195757 ACCTCTGGCATCTGGAGGAACCC-----------------------------------------------------------------------AAACCC i panPan2.chr20 T 38 C 0 s gorGor5.CYUI01015848v1 470613 29 - 578057 ACCTCTGGCATCTGGAGGAACCC-----------------------------------------------------------------------AAACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999446 29 - 110113093 ACCTCTGGCATCTGGAGGAACCC-----------------------------------------------------------------------GAACCC i nomLeu3.chr13 C 0 T 41 s macFas5.chr10 96393812 29 + 96509753 GCCTCTGGCATCTGGAGGAACCC-----------------------------------------------------------------------AAACCC i macFas5.chr10 C 0 T 41 s calJac3.chrUn_GL286459 19806 29 + 372756 ACCTCTGGCATGTGGAGGAACCC-----------------------------------------------------------------------AAACCC i calJac3.chrUn_GL286459 C 0 T 41 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=19932.000000 s hg38.chr20_KI270870v1_alt 80279 37 + 183433 TAACCCCTAACCTCTGGCATCTGGAGGAACCCAAACC s panTro5.chr20 134960 37 - 66533130 TAACCCCTAACCTCTGGCATCTGGAGGAACCCAAACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085392 37 + 62195757 TAACCCCTAACCTCTGGCATCTGGAGGAACCCAAACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470642 37 - 578057 TAACCCCTAACCTCTGGCATCTGGAGGAAGCCAAAGC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19835 41 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999475 41 - 110113093 T e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I e macFas5.chr10 96393841 41 + 96509753 T a score=65908.000000 s hg38.chr20_KI270870v1_alt 80316 41 + 183433 CTAACTCCCTA-CACCTCTGGCATCTGGAGGAACCCAAACCC s panTro5.chr20 134997 42 - 66533130 CTAACTCCCTAACACCTCTGGCATCTGGAGGAAGCCAAACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085429 41 + 62195757 CTAGCCCCCTA-CACCTCTGGCATCTGGAGGAACCCAAACCC i panPan2.chr20 C 0 T 114 s gorGor5.CYUI01015848v1 470679 39 - 578057 CTAAC-CCCTA--ACCTCTGGCATCTGGAGGAAGCCAAACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999434 41 - 110113093 CTGACCCCCTA-CACCTCTGGCATCTGGAGGAACCCGAACCC i nomLeu3.chr13 T 41 T 41 s macFas5.chr10 96393800 41 + 96509753 CTGACTCCCTA-CGCCTCTGGCATCTGGAGGAACCCAAACCC i macFas5.chr10 T 41 T 41 s calJac3.chrUn_GL286459 19794 41 + 372756 CTGACCCCCTA-CACCTCTGGCATGTGGAGGAACCCAAACCC i calJac3.chrUn_GL286459 T 41 T 41 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=546.000000 s hg38.chr20_KI270870v1_alt 80357 2 + 183433 TA s panTro5.chr20 135039 2 - 66533130 TA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470718 2 - 578057 TA i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62085470 114 + 62195757 T e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19835 41 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999475 41 - 110113093 T e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I e macFas5.chr10 96393841 41 + 96509753 T a score=30594.000000 s hg38.chr20_KI270870v1_alt 80359 73 + 183433 ACCCCTA-ACCTCTGGCATCTGGAGGAAGCCAAACCCTAACCCCTAACCTCTG---------------------------------------------------------------------------GCATCTGGAGGAACCCAAACC s panTro5.chr20 135041 147 - 66533130 ACCCCTA-ACCTCTGGCATCTGGAGGaaccc-aaccctaacccctaacctctggcatctggaggaaccaaaccctaaccctaaccTCATGGCATCTGGAGGAACCCAAACCCTAACCCCTACACCTCTGCATCTGGAGGAACCCAAACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085356 73 + 62195757 ACCCCTA-ACCTCTGGCATCTGGAGGAACCCAAACCCTAACCCCTAACCTCTG---------------------------------------------------------------------------GCATCTGGAGGAACCCAAACC i panPan2.chr20 T 114 C 0 s gorGor5.CYUI01015848v1 470720 74 - 578057 ACCCCTACACCTCTGGCATCTGGAGGaacccaaaccctaacccctaacctctg---------------------------------------------------------------------------gcatctggaggaacccaaacc i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19835 41 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999475 41 - 110113093 T e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I e macFas5.chr10 96393841 41 + 96509753 T a score=14791.000000 s hg38.chr20_KI270870v1_alt 80432 12 + 183433 CTAACCCCCTAC s panTro5.chr20 135188 12 - 66533130 CTAACTCCCTAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085429 12 + 62195757 CTAGCCCCCTAC i panPan2.chr20 C 0 T 40 s gorGor5.CYUI01015848v1 470794 10 - 578057 ctaaccccta-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999434 12 - 110113093 CTGACCCCCTAC i nomLeu3.chr13 T 41 C 0 s macFas5.chr10 96393800 12 + 96509753 CTGACTCCCTAC i macFas5.chr10 T 41 C 0 s calJac3.chrUn_GL286459 19794 12 + 372756 CTGACCCCCTAC i calJac3.chrUn_GL286459 T 41 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=5379.000000 s hg38.chr20_KI270870v1_alt 80444 3 + 183433 ACC s panTro5.chr20 135200 3 - 66533130 ACC i panTro5.chr20 C 0 I 154 s panPan2.chr20 62085401 3 + 62195757 ACC i panPan2.chr20 T 40 C 0 s gorGor5.CYUI01015848v1 470804 3 - 578057 acc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999446 3 - 110113093 ACC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96393812 3 + 96509753 GCC i macFas5.chr10 C 0 C 0 s calJac3.chrUn_GL286459 19806 3 + 372756 ACC i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=50439.000000 s hg38.chr20_KI270870v1_alt 80447 26 + 183433 TCTGGCATCTGGAGGAACCCAAACCC s panTro5.chr20 135357 26 - 66533130 TCTGGCATCTGGAGGAACCCAAACCC i panTro5.chr20 I 154 C 0 s panPan2.chr20 62085404 26 + 62195757 TCTGGCATCTGGAGGAACCCAAACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470807 26 - 578057 tctggcatctggaggaacccaaaccc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999449 26 - 110113093 TCTGGCATCTGGAGGAACCCGAACCC i nomLeu3.chr13 C 0 T 38 s macFas5.chr10 96393815 26 + 96509753 TCTGGCATCTGGAGGAACCCAAACCC i macFas5.chr10 C 0 T 38 s calJac3.chrUn_GL286459 19809 26 + 372756 TCTGGCATGTGGAGGAACCCAAACCC i calJac3.chrUn_GL286459 C 0 T 38 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=1092.000000 s hg38.chr20_KI270870v1_alt 80473 2 + 183433 TA s panTro5.chr20 135383 2 - 66533130 TA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085430 2 + 62195757 TA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470833 2 - 578057 ta i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e cebCap1.NW_016107870v1 1126933 0 + 1231380 C e calJac3.chrUn_GL286459 19835 38 + 372756 T e aotNan1.NW_018500483v1 2655368 12 + 11732439 I e nomLeu3.chr13 109999475 38 - 110113093 T e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I e macFas5.chr10 96393841 38 + 96509753 T a score=5177.000000 s hg38.chr20_KI270870v1_alt 80475 2 + 183433 AC s panTro5.chr20 135385 2 - 66533130 GC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085432 2 + 62195757 GC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470835 2 - 578057 ac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999437 2 - 110113093 AC i nomLeu3.chr13 T 38 C 0 s macFas5.chr10 96393803 2 + 96509753 AC i macFas5.chr10 T 38 C 0 s calJac3.chrUn_GL286459 19797 2 + 372756 AC i calJac3.chrUn_GL286459 T 38 C 0 s cebCap1.NW_016107870v1 1126933 2 + 1231380 AC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655380 2 + 11732439 AC i aotNan1.NW_018500483v1 I 12 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e saiBol1.JH378156 16257832 0 + 16356641 C e macNem1.NW_012014244v1 16864818 1 - 16982598 I e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=3321.000000 s hg38.chr20_KI270870v1_alt 80477 1 + 183433 C s panTro5.chr20 135387 1 - 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085434 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470837 1 - 578057 c i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999439 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96393805 1 + 96509753 T i macFas5.chr10 C 0 C 0 s calJac3.chrUn_GL286459 19799 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257832 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1126935 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655382 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e cerAty1.NW_012001373v1 3665912 1 - 3785965 I e colAng1.NW_012114444v1 5536821 1 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 51037 1 - 179258 I e macNem1.NW_012014244v1 16864818 1 - 16982598 I e rheMac8.chr10 92725827 1 - 92844088 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=21000.000000 s hg38.chr20_KI270870v1_alt 80478 2 + 183433 CC s panTro5.chr20 135388 2 - 66533130 CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085435 2 + 62195757 CC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470838 2 - 578057 cc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999440 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725828 2 - 92844088 CC i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96393806 2 + 96509753 CC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864819 2 - 16982598 CC i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3665913 2 - 3785965 CC i cerAty1.NW_012001373v1 I 1 C 0 s manLeu1.NW_012101652v1 51038 2 - 179258 CC i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5536822 2 - 5823884 CC i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chrUn_GL286459 19800 2 + 372756 CC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257833 2 + 16356641 CC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1126936 2 + 1231380 CC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655383 2 + 11732439 CC i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e canFam3.chr24 47583257 6 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=430244.000000 s hg38.chr20_KI270870v1_alt 80480 50 + 183433 CTACACCTCTGGCATCTGGAGGAACCCAAACCCACTTCAATATAAGAGTT s panTro5.chr20 135390 50 - 66533130 CTACACCTCTGGCATCTGGAGGAACCCAAACCCACGTCAATATAAGAGTT i panTro5.chr20 C 0 I 1 s panPan2.chr20 62085437 50 + 62195757 CTACACCTCTGGCATCTGGAGGAACCCAAACCCACGTCAATATAAGAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470840 48 - 578057 t--aaccTCTGGCATCTGGAGGAACCCAAACCCACTTCAGTATAAGAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999442 50 - 110113093 CTACACCTCTGGCATCTGGAGGAACCCGAACCCACTTTGATATAAGAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725830 50 - 92844088 CTACGCCTCTGGCATCTGGAGGAACCCAAACCCACTTTGATCTAAGAGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393808 50 + 96509753 CTACGCCTCTGGCATCTGGAGGAACCCAAACCCACTTTGATCTAAGAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864821 50 - 16982598 CTACGCCTCTGGCATCTGGAGGAACCCAAACCCACTTTGATCTAAGAGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665915 50 - 3785965 CTACGCCTCTGGCATCTGGAGGAACCCAAACCCACTTTGATCTAAGAGTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51040 50 - 179258 CTACGCCTCTGGCATCTGGAGGAACCCAAACCCACTTTGATCTAAGAGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536824 50 - 5823884 CTACACCTCTGGCATCTGGAGGAACCCAAACCCACTTTGATACAAGAGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 19802 50 + 372756 CTACACCTCTGGCATGTGGAGGAACCCAAACCCACTTTGATGTAAGATTT i calJac3.chrUn_GL286459 C 0 I 301 s saiBol1.JH378156 16257835 50 + 16356641 CTACACCTCTGGCATGTGGAGGAACCCAAACCTACTTTGATATAAGAGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1126938 50 + 1231380 CTACACCTCTGGCATGTGGAGGAACCCAAAGCCACTTTGATATGAGAGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655385 49 + 11732439 CTACAACTCTGGCATGTGGAGGAACCCAAA-CCACTTTGATATGAGAATT i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47583263 50 + 47698779 CTGCGCCTCCGGGCTCTGGAGCACCCCAAACGACCCTGGGGATGCGGGGT i canFam3.chr24 I 6 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=484320.000000 s hg38.chr20_KI270870v1_alt 80530 70 + 183433 AGAGTCCAATTCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG----GAC--CCTGGACCTGGTGAGCTCTCCCCC-- s panTro5.chr20 135441 69 - 66533130 AGAGTCCAATTCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG-----AC--CCTGGACCTGGTGAGCTCTCCCCC-- i panTro5.chr20 I 1 C 0 s panPan2.chr20 62085487 70 + 62195757 AGAGTCCAATTCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG----GAC--CCTGGACCTGGTGAGCTCTCCCCC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470888 70 - 578057 AGAGTCCAATTCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG----GAC--CCTGGACCTGGTGAGCTCTCCCCC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999492 67 - 110113093 AGAGTCCAATCCCTCT-----GAGAACCGTCTGATGGCCTTCG----GGCCTCCTGGACCTGGTGGGCTCTCCCCC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725880 71 - 92844088 AGAGTCCAATTCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG----GACCTCCTGGACCTGGTGAGTTCT-CCCC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393858 71 + 96509753 AGAGTCCAATTCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG----GACCTCCTGGACCTGGTGAGTTCT-CCCC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864871 71 - 16982598 AGAGTCCAATTCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG----GACCTCCTGGACCTGGTGAGTTCT-CCCC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3665965 71 - 3785965 AGAGTCCAATCCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG----GACCTCCTGGACCTGGTGAGTTCT-CCCC-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51090 71 - 179258 AGAGTCCAATCCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG----GACCTCCTGGACCTGGTGAGTTCT-CCCC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536874 72 - 5823884 AGAGTCCAGTTCCTCTTCCTGGAGAGCCCTCTGATGGCCTTGG----GACCTCCTGGACCTGGTGAGTTCTCCCCC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 20153 61 + 372756 agaGTCCAATTCCTCTTCCAGGAGAGCCCTCTGAGGGT--------------CTTGGACCTGGTGAGCTCT-CCCC-- i calJac3.chrUn_GL286459 I 301 C 0 s saiBol1.JH378156 16257885 61 + 16356641 AGAGTCCAGTTCCTCTTCCTGGAGAGCCGTCTGAGGGC--------------CTTGAACCTGCTGAGCTCT-CCCC-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1126988 61 + 1231380 GGAGTCCAATTCTTCTTCCTGGAGAGACCTCTGAGGGC--------------CTTGGATCTGCTGAGCTCT-CCCC-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655434 61 + 11732439 AGACTCCAATTCCTCCTCCTGGAGAGCCCTCTGAGGGC--------------CTTGGACCTGGTGAGCTGT-CCCC-- i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47583313 58 + 47698779 -------------GCGTCCTGGAGCACACTCGGATGAGCTGCGTGTTGGC--CCGGGGGCTGGCG----CT-TCCCAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181771410 864 + 182113224 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=415793.000000 s hg38.chr20_KI270870v1_alt 80600 50 + 183433 -------TGCCA---GCCCCTCCTACTGGCCACCCACTTCCTGC-----CC-AGTCACCCAGAGGC s panTro5.chr20 135510 50 - 66533130 -------TGCCA---GCCCCTCCTGCTGGCCACCCACTTCCTGC-----CA-GGTCACCCAGAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085557 50 + 62195757 -------TGCCA---GCCCCTCCTACTGGCCACCCACTTCCTGC-----CC-AGTCACCCAGAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 470958 50 - 578057 -------TGCCA---GCCCCTCCTGCTGGCCACCCACTTCCTGC-----CC-AGTCACCCATAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999559 50 - 110113093 -------TGCCA---GCCCCTCCTGCTGGCCACCCACTTCCTGC-----CC-AGTCACCCAGAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92725951 50 - 92844088 -------TGCCA---GCCCCTCCTGCTGGCCACCCACTTCCTGC-----CC-AGTCACTCAGAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393929 50 + 96509753 -------TGCCA---GCCCCTCCTGCTGGCCACCCACTTCCTGC-----CC-AGTCACTCAGAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864942 50 - 16982598 -------TGCCA---GCCCCTCCTGCTGGCCACCCACTTCCTGC-----CC-AGTCACTCAGAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666036 50 - 3785965 -------TGCCA---GCCCCTCCTGCTGGCCACCCACTTCCTGC-----CC-AGTCACTCAGAGCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51161 50 - 179258 -------TGCCA---GCCCCTCCTGCTGGCCACCCACTTCCTGC-----CC-AGTCACTCAGAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536946 50 - 5823884 -------TGCCA---GCCCCTCCTGCTGGCCACCCACTTCCTGC-----CC-AGGCACTCAGAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 20214 50 + 372756 -------TGCCA---GCCCCTCCTTCTGGGCACCTACTTCCTGC-----CC-ACTCCCTAAGAGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257946 36 + 16356641 -------TGCCA---GCCCCTC--------------CTTCCTGC-----CC-ACTCCCTCAGAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127049 50 + 1231380 -------TGCCA---GCCCCTCCTTCTGGGAACCTACTTCCTGC-----CC-ACTCCCTCAGAGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655495 50 + 11732439 -------AGCCA---GCCCCTCCTTCTGGGCACCTACTTCCTGC-----CC-ACTCCCTCAGAGGC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181772274 55 + 182113224 -------TGCTA---ACCCATCACACTGGATATTCTTCTCTTTTGTCAGTC-AGTCACTCAAGAAA i mm10.chr2 I 864 C 0 s canFam3.chr24 47583371 59 + 47698779 CCCCAAGTGCTCTGTGCCCTCCCTGC--GATGGTCTCCTCTTGC-----CCGAGTCACTTGCAGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22821243 98 + 22939663 I a score=920623.000000 s hg38.chr20_KI270870v1_alt 80650 126 + 183433 CAGGCCACCTCTGGTGTGGGTAAAGCGTTTGTGTTTTCCCCA----------AATG-TGTTCTGTGTTGGCTCTC-GTGTACTGACCACTGTCCATCCAGGCTGG-GAAATTACCATACACATCCCCCCGCC------CCCCACA s panTro5.chr20 135560 125 - 66533130 CAGGCCACCTCTGGTGTGGGTGAAGCGTTTGTGTTTCCCCCA----------AATG-TGTTCTGTGTTGGCTCTC-GTGTACTGACCACTGTCCATCCAGGCTGGCGAAATTACCATACACATCCCCC--GC------CCCCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085607 126 + 62195757 CAGGCCACCTCTGGTGTGGGTGAAGCGTTTGTGTTTCCCCCA----------AATG-TGTTCTGTGTTGGCTCTC-GTGTACTGACCACTGTCCATCCAGGCTGG-GAAATTACCATACACATCCCCCCGCC------CCCCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471008 110 - 578057 CAGGCC----------------AAGCGTTTGTGTTTTCCCCA----------AATG-TGTTCTGTGTTGGCTCTC-GTGTACTGACCACTGTCCATCCAGGCTGG-GAAATTACCATACACATCCCCCCGCC------CCCCACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999609 126 - 110113093 CAGGCCGCCTCTGGTGTGGGTAAAGCGTTTATGTTTTCCCCA----------GATG-TGTTCTGTGTTGGCTCTC-GTGTACTGACCGCTGTCCATCCAGGCTGG-GAAATTACCATACACATCCCCGCACC------CCCCGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726001 123 - 92844088 CAGGCAGCCTCTGGTGTCTGTAAAGTG--TGTGTTTTCCCCA----------GATG-TGTTCTGTGTTGGC-GTC-GTTTACTGACCACTGTCCATCCAGGCTGG-GAAATGAGCATACACATCCCCTCGCC------CCCCATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96393979 123 + 96509753 CAGGCAGCCTCTGGTGTCTGTAAAGTG--TGTGTTTTCCCCA----------GATG-TGTTCTGTGTTGGC-GTC-GTTTACTGACCACTGTCCATCCAGGCTGG-GAAATGAGCATACACATCCCCTCGCC------CCCCATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16864992 123 - 16982598 CAGGCAGCCTCTGGTGTCTGTAAAGTG--TGTGTTTTCCCCA----------GATG-TGTTCTGTGTTGGC-GTC-GTTTACTGACCACTGTCCATCCAGGCTGG-GAAATGAGCATACACATCCCCTCGCC------CCCCATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666086 123 - 3785965 CAGGCAGCCTCTGGTGTCTGTAAAGTG--TATGTTTTCCCCA----------GACG-TGTTCTGTGTTGGC-GTC-GTTTACTGACCACTGTCCATCCAGGCTGG-GAAATGAGCATACACATCCCCTCGCC------CCCCATA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51211 123 - 179258 CAGGCAGCCTCTGGTGTCTGTAAAGTG--TGTGTTTTCCCCA----------GACG-TGTTCTGTGTTGGC-GTC-GTTTACTGACCACTGTCCATCCAGGCTGG-GAAATGAGCATACACATCCCCTCGCC------CCCCATA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5536996 124 - 5823884 CAGGCAGCCTCTGGTGTCTGTAAAGTC--TTTGTTTTCCCCA----------GATG-TGTTCTGTGTTGGCTGTC-GTTTACTGACCACTGTCCATCCAGGCTGG-GAAATTAGCATACACATCCCCTCGCC------CCCCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 20264 127 + 372756 CAGGCCACCTCTGGGGTCTGTAAAGTGTTTGTGTTTTCCCCA----------AATGCTGTTCTGTTTTGGCTCTT-GTGTACTGACCACTGTCCATCCAGGTTGG-GAAATTAGCATACACATTGCCCCATC------CCCCACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16257982 126 + 16356641 CAGGCCGCCGCTGGGGTCTGCACAGTGTTTGTGTTTTCCCC-----------AGTGCTGTTCTGTGTTGGCTTTT-GCGTGCTGACCACGGTCCATCCAGGCGGG-GAAATCAGCATACACATTGCCCCATT------CTCCACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127099 127 + 1231380 CAGGCCGCCTCTGGGGTCTGTAAAGTGTGTGTGTTTTCCCCA----------AATGCTGTTCTGTGTTGGCTCTT-GTGTGCTGACCACTGTCCATCCAGGCTGA-GAAATCAGCATACACTTTGTCCCATC------CCCCACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655545 136 + 11732439 CAGGCCGCCTCTGGGGTCTGTAAAGTGCTTGTGTTTACAACACAGAACAACCAACCGTG-TCTGTGTTGGCTCTT-GTGTGCTGACCACTGTCCAACCAGGCTGG-GAAATGCGCACACACACTGCCCCGTC------CCCCACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22821341 106 + 22939663 CAGACCA-CTCTGGCATGTGTAGAATGTTTGTGTTTTTATCA----------CACA--------TGTTAGCTTTCTGTGTCCTGAGTGTT-TCCTTCCAGGCTAG-GAAGTTAGCACATGTAGCCCC------------------ i otoGar3.GL873542 I 98 C 0 s mm10.chr2 181772329 125 + 182113224 CAAA--GCTTCTGGACATTAGGACATATTTGTATTTTCTCCA----------AAAC----TTTCTGTTCAC--TT-TTTAAATGAGCACTGTGTATCAAGTCTGG-AAAATTAATGCCTACTTTTCCACAGTGCTAAGCCTTACA i mm10.chr2 C 0 C 0 s canFam3.chr24 47583430 112 + 47698779 ------CACACTGGTGCCTGCAGGAGGCATTTGTTTCCTCCA----------GGGCCTGTTGAGCGCCGGGCTCC-GTGCACCGAGCGCCGTACACCCGGGCTGG-GAAATCAGCACGCGCAGCACCCCA--------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1834044 342 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=281393.000000 s hg38.chr20_KI270870v1_alt 80776 37 + 183433 ATTTTTCTAAGC----------------------------------------CTGTAGAG----CAGCAGA---------------------GGGGGCTGCT s panTro5.chr20 135685 35 - 66533130 A-TTTTCTAAGC----------------------------------------CTGTAGAG----CAGCAGA----------------------GGGGCTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085733 37 + 62195757 ATTTTTCTAAGC----------------------------------------CTGTAGAG----CAGCAGA---------------------GGGGGCTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471118 37 - 578057 ATTTTTCTAAGC----------------------------------------CTGTAGAG----CAGCAGA---------------------GGGGGCTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999735 37 - 110113093 ATTTTTCTAAGC----------------------------------------CTGAAGAG----CAGCAGA---------------------GGGGGCTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726124 36 - 92844088 ATTTTTCTAAGC----------------------------------------CTGAAAAG----CAGCAGA----------------------AGGGCTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394102 36 + 96509753 ATTTTTCTAAGC----------------------------------------CTGAAAAG----CAGCAGA----------------------AGGGCTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865115 36 - 16982598 ATTTTTCTAAGC----------------------------------------CTGAAAAG----CAGCAGA----------------------AGGGCTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666209 36 - 3785965 ATTTTTCTAAGC----------------------------------------CTGAAAAG----CAGCAGA----------------------AGGGCTGCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51334 36 - 179258 ATTTTTCTAAGC----------------------------------------CTGAAAAG----CAGCAGA----------------------AGGGCTGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537120 34 - 5823884 ATTTTTCTAAGC----------------------------------------CTGAAAAG----CAGCAGA----------------------AGGAC--CT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 20391 37 + 372756 ATTTTTCTAAGT----------------------------------------CTGAAAAG----CAGCACA---------------------GGGGGCTGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16258108 37 + 16356641 ATTTTTCTAAGC----------------------------------------CTGAAAAG----CAGCACA---------------------GGGGCCTGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127226 37 + 1231380 ATTTTTCTAAGC----------------------------------------CTGAAAAG----CAGCACA---------------------GGGGGCCGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655681 37 + 11732439 ATTTTTCTAAGC----------------------------------------CTGAAAAG----CAGCACA---------------------GGGGGCCGCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1834386 36 - 2029793 ATTTTTCTAA-C----------------------------------------CTGAAAAG----CAGAAGA---------------------GGGGGCCACG i proCoq1.NW_012150197v1 I 342 C 0 s otoGar3.GL873542 22821447 33 + 22939663 ATTTGTCCAA-C----------------------------------------CTGGAAAG----CAGAAGA---------------------AGTCCCT--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181772454 36 + 182113224 ATCTGCACTGGG----------------------------------------CTGTTGCT----GAGTAGA----------------------AAGGTCACT i mm10.chr2 C 0 C 0 s canFam3.chr24 47583542 102 + 47698779 GTATTTCTAAGCTAAGGCCGGGGCGGGGGGTGGTGGCTGTTGCTGGGCAGCGCTGCGAGGATGACAGCGGGCTCCCCCCACACCCGAAAATTGGGGGCGACT i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56839852 826 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=602875.000000 s hg38.chr20_KI270870v1_alt 80813 53 + 183433 CTGA-GCCCTGGAGCTAGGGCTGCAGTTGGACCCATCAGAGAGCAG-CTGCCT---------------GG s panTro5.chr20 135720 55 - 66533130 CTGAGGCCCTGGAGCTAGGGCTGCAGTTGAACCCATCAGAGAGCAGCCTGCCT---------------GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085770 53 + 62195757 CTGA-GCCCTGGAGCTAGGGCTGCAGTTGAACCCATCAGAGAGCAG-CTGCCT---------------GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471155 53 - 578057 GTGA-GCCCTGGAGCTAGGGCTGCAGTTGAACCCATCAGAGAGCAG-CTGCCT---------------GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999772 53 - 110113093 CTGA-GCCCTGGAGCTGGGGCTGCAGTTGAACCCATCAGAGAGCAG-CTGCCT---------------GG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726160 52 - 92844088 CTGA-GCCC-GGAGCTGGGGCTGCAGTTGAGGCCACCAGAGAGCAG-CGGCCT---------------GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394138 52 + 96509753 CTGA-GCCC-GGAGCTGGGGCTGCAGTTGAGGCCACCAGAGAGCAG-CGGCCT---------------GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865151 52 - 16982598 CTGA-GCCC-GGAGCTGGGGCTGCAGTTGAGGCCACCAGAGAGCAG-CGGCCT---------------GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666245 52 - 3785965 CTGA-GCCC-GGAGCTGGGGCTGCAGTTGAGGCCACCAGAGAGCAG-CTGCCT---------------GG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51370 52 - 179258 TTGA-GCCC-GGAGCTGGGGCTGCAGTTGAGGCCACCAGAGAGCAG-CTGCCT---------------GG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537154 53 - 5823884 CTGA-GCCCTGGAGCTGGGGCTGCAGTTGAAGCCACCAGAGAGCAG-CTGCCT---------------GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 20428 53 + 372756 CTGA-GCCCTGGAGCTGGGGCTTCCGTCAAACCCACCAGAGAGGAG-CTGCCT---------------GG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16258145 53 + 16356641 CTGA-GCCCTGGAGCTGGGGCTTCTGTTGAACCCACCAGAGAGGAG-CTGCCT---------------GG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127263 53 + 1231380 CTGA-GCCCTGGAGCGGGGGCTTCTGTTGAACCCACCAGAGAGGAG-CTGCCT---------------GG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655718 53 + 11732439 CTGA-GCCCTGGAGCTGGGGCTTCCGTTGAACCCACCAGCGAGGAG-CTGCCT---------------GG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56840678 53 + 57149010 CTGA-GCCCTGGAGCTGGGGCTGCAGTTAAACCCACCCGGGAGCAG-CTGCCT---------------GG i micMur3.chr18 I 826 C 0 s proCoq1.NW_012150197v1 1834422 53 - 2029793 CTGA-GCCCTGGAGCTGGGGCTGCAGTTAAACCCGTCAGGGAGCAG-CTGCCT---------------GG i proCoq1.NW_012150197v1 C 0 I 840 s otoGar3.GL873542 22821480 44 + 22939663 ATGG-GCCCCAGATCTGGGGCTGCAGTTAAGCCCATCATG--------TGTAC----------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181772490 37 + 182113224 TTAG-AGCATGGTGGTGAGTTTGCAG----------------GCAG-CTGCCT---------------AG i mm10.chr2 C 0 C 0 s canFam3.chr24 47583644 68 + 47698779 CTGA-GCCCTGGAGCTGGGGCTACAATTAAACTCACCAGGGAACAG-CTGCCTCCCGTCAGCCGCCTGGG i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 221254 1888 - 397369 I a score=45909.000000 s hg38.chr20_KI270870v1_alt 80866 3 + 183433 GCT s panTro5.chr20 135775 3 - 66533130 GCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085823 3 + 62195757 GCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471208 3 - 578057 GCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999825 3 - 110113093 GCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726212 3 - 92844088 GCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394190 3 + 96509753 GCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865203 3 - 16982598 GCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666297 3 - 3785965 GCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51422 3 - 179258 GCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537207 3 - 5823884 GCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 20481 3 + 372756 GCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16258198 3 + 16356641 GCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127316 3 + 1231380 GCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655771 3 + 11732439 GCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56840731 3 + 57149010 GCT i micMur3.chr18 C 0 I 1805 s otoGar3.GL873542 22821524 3 + 22939663 TCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181772527 3 + 182113224 GCT i mm10.chr2 C 0 I 5 s canFam3.chr24 47583712 3 + 47698779 GCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1834475 840 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 221254 1888 - 397369 I a score=260596.000000 s hg38.chr20_KI270870v1_alt 80869 41 + 183433 -----TACCCTACCCAAGCAGGGATTTGGG-CAGG------GGTCCTGCA--GTT s panTro5.chr20 135778 42 - 66533130 -----CACCCTACCCAAGCAGGGATTTGGGCCAGG------GGTCCTGAA--GTT i panTro5.chr20 C 0 n 0 s panPan2.chr20 62085826 41 + 62195757 -----CACCCTACCCAAGCAGGGATTTGGG-CAGG------GGTCCTGAA--GTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471211 41 - 578057 -----CACCCTACCCAAGCAGGGATTTGGG-CAGG------GGTCCTGCA--GTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999828 41 - 110113093 -----CACCCTACCCACGCAGGGATTTGGG-CAGG------GGTCCTGCG--GTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726215 39 - 92844088 -----CACCCGACCCAAACAGGAATGTGGG-CAGG------AGCCCTGCA--G-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394193 39 + 96509753 -----CACCCGACCCAAACAGGAATGTGGG-CAGG------AGCCCTGCA--G-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865206 39 - 16982598 -----CACCCGACCCAAACAGGAATGTGGG-CAGG------AGCCCTGCA--G-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666300 41 - 3785965 -----CACCCGACCCAAACAGGAATGTGGG-CAGG------AGCCCTGCAGTG-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51425 41 - 179258 -----CACCCGACCCAAACAGGAATGTGGG-CAGG------AGCCCTGCAGTG-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537210 41 - 5823884 -----CACCCGACCCAAACAGGAATTTGGG-CAGG------AGTCCTGCGGTG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 20484 41 + 372756 -----CACCCTAGCCAAGCAGGAATTTAGG-TAGG------GGTCCTGCAGTG-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16258201 41 + 16356641 -----CACCCTAGCCAAACAGGAATTTAGG-CAGG------GTTCCTGCAGCG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127319 41 + 1231380 -----CACCCTAGCCAAACAGGAATTTAGG-CAGG------GGCCCTGCAGTG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655774 41 + 11732439 -----CACCCTGGCCAAACAGGAATTTAGG-CAGG------GGTCCTGCAGTG-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22821527 38 + 22939663 ------TCTGTACCCAAAGGGGAATTTGGG-CAAGTCTGACAGTC---------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181772535 41 + 182113224 -----TTCCTTAGCCAAATTTAAATTTGAG-CAAG------GGTCTTAGAATT-- i mm10.chr2 I 5 C 0 s canFam3.chr24 47583715 44 + 47698779 CGCCCATCTCCCCCTAAACAGGGATGCTTC-CA--------TTTCCTGCAGGG-- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1834475 840 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=682231.000000 s hg38.chr20_KI270870v1_alt 80910 108 + 183433 GGAGAGCCTGG-GATTGGAGAAGGAAAACAGAACTGTTGTGAAAGCCAAAATCCCCAAGGGCTTTGAGGCCTG--------GGGATCTTCCCTCGAGCTCTCTCCCTTCTGA--ACTGG s panTro5.chr20 66311795 108 + 66533130 GGAGAGCCTGG-GATTGGAGAAGGAAAACGGAACTGTTGTGAAAGCCAAAATCCCCAAGGGCTTTGAGGCCTG--------GGGATCTTCCCTCGAGCTCTCTCCCTTCTGA--ACTGG i panTro5.chr20 T 85471 C 0 s panPan2.chr20 62085867 108 + 62195757 GGAGAGCCTGG-GCTTGGAGAAGGAAAACGGAACTGTTGTGAAAGCCAAAATCCCCAAGGGCTTTGAGGCCTG--------GGGATCTTCCCTCGAGCTCTCTCCCTTCTGA--ACTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471252 108 - 578057 GGAGAGCATGG-GATTGGAGAAGGAAAACGGAACTGTTGTGAAAGCCAAAATCCCCAAGGGCTTTGAGGCCTG--------GGGATCTTCCTTCGAGCTCTCTCCCTTCTGA--ACTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999869 108 - 110113093 GGAGAGCCTGG-GGTTAGAGAAGGAAAACGGAACTGTTGTGAAAGCCAAAATCCCCAAGGGCTTTGAGGCCTG--------GAGATCTTCCCTCGAGCCCTCTCCCTTCTGA--ACTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726254 82 - 92844088 GCAGAGCCTGG-GGTTAGAGGAGGAAAACAGAACTGTTGTGA------------------------AGGCCTG--------GAG--CTTCCCTCGAGCCCTCTCCTTTCTGA--ACTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394232 82 + 96509753 GCAGAGCCTGG-GGTTAGAGGAGGAAAACAGAACTGTTGTGA------------------------AGGCCTG--------GAG--CTTCCCTCGAGCCCTCTCCTTTCTGA--ACTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865245 82 - 16982598 ACAGAGCCTGG-GGTTAGAGGAGGAAAACAGAACTGTTGTGA------------------------AGGCCTG--------GAG--CTTCCCTCGAGCCCTCTCCTTTCTGA--ACTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666341 82 - 3785965 GCAGAGCCTGG-GGTTAGAGGAGGAAAACAGAACTGTTGTGA------------------------AGGCCTG--------GAG--CTTCCCTCGAGCCCTCTCCTTTCTGA--ACTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51466 82 - 179258 GCAGAGCCTGG-GGTTAGAGGAGGAAAACAGAACTGTTGTGA------------------------AGGCCTG--------GAG--CTTCCCTCGAGCCCTCTCCTTTCTGA--ACTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537251 82 - 5823884 GGAGAGCCTGG-GGTTGGAGAAGGAAAACAGAACTGTTGTGA------------------------AGGCCCG--------GAG--CTTCCCTGGGGCCCTCTCCTTTCTGA--ACTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 20525 108 + 372756 AGAGAGCCTGG-GGTTAGAGAAGGAAAAGGGAGCGGCTGTCAAAGCCATAATCCCCAAGGGCTCTGAGGCCTG--------GGGATCTTCCCTCGAGCCCTCTCTCTTCTGA--ACTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16258242 108 + 16356641 AGAGAGCCTGG-GGTTAGAGAAAGAAAAGGGAGCTGTCGTCAAAGCCATAATCCCCAAGGGCTCTGAGGCCTG--------GCGATCTTCCCTTGAGCCCTCTCCCGTCTGA--ACCGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127360 108 + 1231380 AGAAAGCCTGG-GGTTAGAGGAGGACAAGGGAGCTGTCGTCAAAGCCGTAATCGTGAAGGGCTCTGAGGCCTG--------GGGATCTTCCCTCGAGCCCTGTCTCTTCTGA--ACTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655815 100 + 11732439 AGAGAGCCTGG-GGTTAGAGAGGGAAAAGGGAGGTGT--------CCATAATACACAAGGGCTCTGAGGCCTG--------GGGATCTTCCCTCGAGCCCTCTCCCTTCTGA--ACTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22821565 99 + 22939663 AGGGAGACTGGAGGTGAGAGGAGGAATCCATCACTCTGGTGACGCTCAGACTCTTCCTGCCCAT--ATGTCCT--------GGG----CCCTTAGAGC----TGCTTTCTGA--ACTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181772576 109 + 182113224 ACAGGAACTAG-TATGGAAGGAGGAAAATGGGGCTATTTTAAAAACTATCTCCTCTTGGTTCTTCAAGGCAAGAGAGAGAAGAG-------GTAGAGCCTGCTCTTTTCTGA--GCTAG i mm10.chr2 C 0 I 168 s canFam3.chr24 47583759 105 + 47698779 ---GGACC--G-GGTGGGATGTCAGAACCGTCCCCGCCCCCAGGGCCGGAGCCCCAGAGCTGCCTGGGCCCCG--------CAGGGCATCCTTCGCCTGCTCTCCTGCCTGGTTCCCAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1834475 840 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=604495.000000 s hg38.chr20_KI270870v1_alt 81018 93 + 183433 GGATGAGCC---------------------AGCGTGTGGGCTCATCCTGACCCTAAAGGGA-----------------------------ATGTGAGAT-G-CCCCTCCTAGTGGAATT---TTGTCTTC-AAGGCCTCAGTAAAATGT s panTro5.chr20 66311903 93 + 66533130 GGATGAGCC---------------------AGGGTGTGGGCTCATCCTGACCCTAAAGGGA-----------------------------ATGTGAGAT-G-CCCCTCCTAGTGGAATT---TTGTCTTC-AAGGCCTCAGTAAAATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62085975 93 + 62195757 GGATGAGCC---------------------AGGGTGTGGGCTCATCCTGACCCTAAAGGGA-----------------------------ATGTGAGAT-G-CCCCTCCTAGTGGAATT---TTGTCTTC-AAGGCCTCAGTAAAATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471360 93 - 578057 GGATGAGCC---------------------AGGGTGTGGGCTCATCCTGACCCTAAAGGGA-----------------------------ATGTGAGAT-G-CCCCTCCTAGTGGAATT---TTGTCTTC-AAGGCCTCAGTAAAATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 109999977 86 - 110113093 GGATGAGCC---------------------AGGGTGTGG-------CAGACCCGATAGGGA-----------------------------ATGTGAGAT-G-CCCCTCCTAGTGGAATT---TTATCTTC-AAGGCCTCAGTAAAATGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726336 79 - 92844088 GGATGAGCC---------------------AGGGTGTGGG------CAGACCCGAAAGGGA-----------------------------ATGTGGGAT-G-CCCGTCCTCGTGGGATT------------AAGGCCTCAGTGAAATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394314 79 + 96509753 GGATGAGCC---------------------AGGGTGTGGG------CAGACCCGAAAGGGA-----------------------------ATGTGGGAT-G-CCCGTCCTCGTGGGAGT------------AAGGCCTCAGTGAAATGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865327 79 - 16982598 GGATGAGCC---------------------AGGGTGTGGG------CAGACCCGAAAGGGA-----------------------------ATGTGGGAT-G-CCCGTCCTCGTGGGAGT------------AAGGCCTCAGTGAAATGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666423 79 - 3785965 GGATGAGCC---------------------AGGGTGTGGG------CAGACCCGAAAGGGA-----------------------------ATGTGGGAT-G-CCCGTCCTCGTGGGAGT------------AAGGCCTCAGGAAAATGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51548 79 - 179258 GGATGAGCC---------------------AGGATGTGGG------CAGACCCGAAAGGGA-----------------------------ATGTGGGAT-G-CCCGTCCTCGTGGGAGT------------AAGGCCTCAGTAAAATGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537333 79 - 5823884 GGATGGGCC---------------------AGGGTGTGGG------CAGACCCGAAAGGGA-----------------------------ATGTGGGAT-G-CCCGTCCTAGTGGGAGT------------AAGGCCTCAGTAAAATGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 20633 90 + 372756 GGATGAGCC---------------------AGGGCATGGA------CAGACCTGAAAGAGA-----------------------------ATGTGGGAT-G-CCTTTCCTAGTGGAATAATTTTCTCTTC-AAGGCCTCAATAAAATGT i calJac3.chrUn_GL286459 C 0 I 314 s saiBol1.JH378156 16258350 90 + 16356641 GGAAGAGCC---------------------AGGGCATGGA------CAGACCTGAAAGGGG-----------------------------ATGTGGGAT-G-CCTTTCCTGGTTGAATAATTTTCTCTTC-AAGGCCTCAGTAAAATGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127468 90 + 1231380 GGATGAGCC---------------------AGGGCGTGGA------CAGACATGAAAAGGG-----------------------------ACGTGGGAT-G-CCTTTCCTAGTGGAATAATTTTCTCTTC-AAGCCCTCAATAAAATGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2655915 90 + 11732439 GGATGAGCC---------------------AGGGCATGGA------CAGGCCTGAAAGGGA-----------------------------ATGTGGGAT-G-CCTTTCCTAGTGGAATAATTTTCTCTTC-AAGGCCTCAATAAAATGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22821664 87 + 22939663 AGAAGAGCC---------------------AGGCTGTGGG------CAGAACTGATGGAAA-----------------------------CGTTGAGGT-GTCTCTTTCTGATTGGGTT-----ATCTGCAAAGGCCTCAATAAAGTAt i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47583864 134 + 47698779 GGTGGAGGCCTGAGCGCCTGCTCCCTCCTGGGCGTGTGGA------CAGACCCTGGAGGGCCCTTTAAGCAGATTAGTTCCATTCTGTTTGTGCAAGAGAG-CCCATTCCAGGGGG------TCACCCTC-AAGAGCCGGGT-AAGCGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1834475 840 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181772685 168 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=484999.000000 s hg38.chr20_KI270870v1_alt 81111 53 + 183433 GGTTTTAAGGCAGAAGGAGATGGCCATTTCCTTTC-TTTTTGGGCTGGAAAGCT s panTro5.chr20 66311996 53 + 66533130 GGTTTTAAGGCAGAAGGAGATGGCCATTTCTTCTG-TTTTTGGGCTGGAAAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086068 53 + 62195757 GGTTTTAAGGCAGAAGGAGATGGCCATTTCTTCTC-TTTTTGGGCTGGAAAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471453 53 - 578057 GGTTTTAAGGCAGAAGGAGATGGCCATTTCTTCTC-TTTTTGGGCTGGAAAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000063 54 - 110113093 GGTTTTAAGGCAGAAGGAGATGGCCATTTCTTCTCTTTTTTGGGCTGGAAAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726415 53 - 92844088 GGGTTTAAGGAAGAAGGAGATGGCAGTTTCTTCTC-TTTTTGGGCTGGAAAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394393 53 + 96509753 GGGTTTAAGGAAGAAGGAGATGGCAGTTTCTTCTC-TTTTTGGGCTGGAAAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865406 53 - 16982598 GGGTTTAAGGAAGAAGGAGATGGCAGTTTCTTCTC-TCTTTGGGCTGGAAAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666502 53 - 3785965 GGGTTTAAGGAAGAAGGAGATGGCAGTTTCTTCTC-TTTTTGGGCTGGAAAGCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51627 53 - 179258 GGGTTTAAGGAAGAAGGAGATGGCAGTTTCTTCTC-TTTTTGGGCTGGAAAGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537412 53 - 5823884 GGTTTTAAGGAAGAAGGAGATGGCAGTTTCTTCTC-TTTTTGGGCTGGAAAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21037 53 + 372756 GGTTTTAAGGAAGAAGGAGATGGCCATTGCTTCTC-TTCTTGGGCTGGAAAGCT i calJac3.chrUn_GL286459 I 314 C 0 s saiBol1.JH378156 16258440 53 + 16356641 GGTTTTAAGGAAGAAGGAGATGGCCATTGCTTCTC-TTCTCAGGCTGGAAAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127558 53 + 1231380 GGTTTTAAGGAAGAAGGAGATGGCCATTGCTTCTC-TTCTCAGGCTGGAAAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656005 53 + 11732439 GGTTTTAAGGAAGAAGGAGATGGCCATTGCTTCTC-TTCTCGGGCTGGAAAGCT i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47583998 53 + 47698779 GGCTGCAGAGGAGATGGAAGTGGTCCCTTCTCCTC-TCCCCGGGCTGGACAGTT i canFam3.chr24 C 0 I 891 e proCoq1.NW_012150197v1 1834475 840 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181772685 168 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22821751 0 + 22939663 C a score=1102192.000000 s hg38.chr20_KI270870v1_alt 81164 168 + 183433 GAACGGTTCTAAGAAAAATTTCTGGGACCAAGGAACGAAAATGCTGGAGCAGAATTCCAGAGCAGGACCTCTTGATCCCGCGAAGCCGACGTGTCTTCTGGGGAGTTCCCAAAGATCCATGGGGAAGACGCCCCCAAACCCAGTGCTGCTGGCTCTGGCCATACCCtc s panTro5.chr20 66312049 168 + 66533130 GAACGGTTCTAAGAAAAATTTCTGGGACTAAGGAACGAAAATGCTGGAGCAGAATTCCAGAGCAGGACCTCTTGATCCTGCGAGGCTGACGTGTCTTCTGGGGAGTTCCCAAAGATCCATGGGGAAGACGCCCCCAAACCCAGCGCTGCCGGCTCTGGCCATACCCtc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086121 168 + 62195757 GAACGGTTCTAAGAAAAATTTCTGGGACTAAGGAACGAAAATGCTGGAGCAGAATTCCAGAGCAGGACCTCTTGATCCTGCGAGGCTGACGTGTCTTCTGGGGAGTTCCCAAAGATCCATGGGGAAGACGCCCCCAAACCCAGCGCTGCCGGCTCTGGCCATACCCtc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471506 168 - 578057 GAACGGTGCTAAGAAAAATTTCTGGGACCAAGGAACGAAAATGCTGGAGCAGAATTCCAGAGCAGGACCTCTTGATCCCGCGAGGCCGACGTGTCTTCTGGGGAGTTCCCAAAGATCCATGGGGAAGATGCCCCCAAACCCAGCCCTGCCAGCTCTGGCCATACCCtc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000117 168 - 110113093 GAACGGTTCTAAGAAAAATTTCTGGGACCAAGGAACGAAAATGCTGGAGCAGAATTCCAGAGCAGGACCTCTTGATCCTGCGAGGCTGCCATGTCTTCTGGGGAGTTCCCAAAGATCCATGGGCAAGATGCCCCCAAACCCAGCCCTGCTGGCTCTGGCCGTACCAtc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726468 119 - 92844088 GTAGGGTTCTAAGAAAAATTTCTGGGACAGAGGAACGAAAATGCTGGAGCAGAATTCCAGAGCGGGACCTCTTGATCCTGCGAGGCC-------------------------------------------------AACCCAGCCCTACTGGCTCTGGCCATACCCtc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394446 119 + 96509753 GTAGGGTTCTAAGAAAAATTTCTGGGACAGAGGAACGAAAATGCTGGAGCAGAATTCCAGAGCGGGACCTCTTGATCCTGCGAGGCC-------------------------------------------------AACCCAGCCCTACTGGCTCTGGCCATACCCtc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865459 119 - 16982598 GTAGGGTTCTAAGAAAAATTTCTGGGACAGAGGAACGAAAATGCTGGAGCAGAATTCCAGAGTGGGACCTCTTGATCCTGCGAGGCC-------------------------------------------------AACCCAGCCCTACTGGCTCTGGCCATACCCtc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666555 119 - 3785965 GAAGGGTTCTAAGAAAAATTTCTGGGACAGAGGAACAAAAATGCTGGAGCAGAATTCCAGAGCGGGACCTCTTGATCCTGCGAGGCC-------------------------------------------------AACCCAGCCCTACTGGCTCTGGCCATACCCtc i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51680 119 - 179258 GAAGGGTTCTAAGAAAAATTTCTGGGACAGAGGAACGAAAATGCTGGAGCAGAATTCCAGAGCGGGACCTCTTGATCCTGCGAGGCC-------------------------------------------------AACCCAGCCCTACTGGCTCTGGCCATACCCtc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537465 168 - 5823884 GAACGGTTCTGAGAAAAATTGCTGGGACAGAGGAACGAAAATGCTGGAGCAGAATTCCAGGGCGGGACCTCTTGATCCTGCGAGGCCGATGTGTCTTCTGGGGAGTTCCCAAAGATCCGTGGGGAAGACGCCCCCAAACCCAGCCCTACTGGCTCTGGCCATACCCtc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21090 168 + 372756 GAACGGTTCTAAGAGCAATTTCTGGGACTGAGGAACCAAAGTGCTGGAGCAGAATTCCAGAGCAGGCCCCCTTGACCATGCAAAGCCAGCGTGTCTTCTGGGGAGTTCCCAAAGATCCATGGGGAGGACGCCCCCAAACCCAGCCCTGCTGGCTCTGGCCATACCCtc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16258493 160 + 16356641 GAACGG--------GCAATTTCTGGGACTGAGGAACCCAAGTGCTGGAGCAGAATTCCAGAGCAGGCCCCCTTGACCCTGCAAGGCCGGCGTGTCTTCTGGGGAGTTCCCAAAGATCCATGGTGAGGACACCCCCAAACCCAGCCCTGCTGGCTCCGACCATACCCtc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127611 168 + 1231380 GAACGGTTCTAAGAGCCATTTCTGGGACTGAGGGACAAAAGTGCTAGAGCAGAATTCCAGAGCAGGCCCCATTGACCCTGCAAGGCCAGCGTGTCTTCTGGGGAGTTCCCAAAGATCCATGGGGAGGACGCCCCCAAACCCAGCCCTGCTGGCTCCGGCCATACCCtc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656058 168 + 11732439 GAACGGTTCTAAGAGCAATTTCTGGGACTGAGGAACAAAAGTGCTGGAGCAGAATTCCAGAGCAGGCCCCCTCGACCCTGCAAGGCCAGCGTGTCTTCTGGGGAGTGCCCAAAGATCCATGGGGAGGACGCCCCCAAACCCAGCCCTGCTGGCTCTGGCCATACCCTC i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1834475 840 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181772685 168 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22821751 0 + 22939663 C a score=2333423.000000 s hg38.chr20_KI270870v1_alt 81332 288 + 183433 ttttttttttttt-ttttttttttgaagatggagtctcactctgttgcccaggctggagtgcagtggcgtgatcttggctcactgcaacctccgcctactgggttc-agcaattctcctgcctcggcct-cc-----------------tgcatgtgccaccacacctggctaatttttgtatctttagtagagacagggtttcaccatgttggtcaggctggtctttaactcctgccctcaagtgatccacccacctcggcctcccaaagtgttagga-ttacagg--cttgagccaccattcctggccT s panTro5.chr20 66312217 281 + 66533130 -------tttctt-ttttttttttgaagacggagtctcactctgttgcccaggctggagtgcagtggtgtgatcttggctcactgcaacctccgcctactgggttc-agcaattctcctgcctcggcct-cc-----------------tgcatgtgccaccacacctggctaatttttgtatctttagtagagacagggtttcaccatgttggtcaggctggtctttaactcctgccctcaagtgatccacccacctcggcctcccaaagtgttagga-ttacagg--cttgagccaccattcctggccT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086289 279 + 62195757 ---------tttc-ttttttttttgaagacggagtctcactctgttgcccaggctggagtgcagtggtgtgatcttggctcattgcaacctccgcctactgggttc-agcaattctcctgcctcggcct-cc-----------------tgcatgtgccaccacacctggctaatttttgtatctttagtagagacagggtttcaccatgttggtcaggctggtctttaactcctgccctcaagtgatccacccacctcggcctcccaaagtgttagga-ttacagg--cttgagccaccattcctggccT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471674 275 - 578057 ------------t-ttttttttttgaagacggagtctcactctgttgcccgggctggagtgcagtggcgtgatcttggctcactgcaacctccgcctactgggttc-agcaattctcctgcctcggcct-cc-----------------tgcatgtgccaccacacctggctaatttttgtatctttagtagagacagggtttcaccatgttggtcaggctggtctttaactcctgccctcaagtgatccacccacctcggcctcccaaa-tgttagga-ttacagg--cttgagccaccattcctggccT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000285 287 - 110113093 ----ttttttttt-ttttttttttaaagacggagtctcactctgttgcccaggctggagtgcagtggcgtgatcttggctcactgcaacctctgcctactgggttc-agcaattctcctgcctcggcct-cc-----------------tgcatgtgccactacacctggctaatttttgtatctttagtagaggcagggtttcaccatgttggccaggctggtctttaactcctgccctcaagtgatccacccacctcggcctcccgaagtgttaggaGCCACCATTCCTTGAGCCACCATTCCTGGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726587 298 - 92844088 -------tttttc-tttttttcttaaagatggagtctcaccctgttgcccaggctggagggcagtggcgtgatcttggctccctgcaacctccgcctcctgggttc-agcaattctcctgccttagcct-ccaagtagctgagattacaggcttgtgccaccacacctggctaatttttgtatctttagtggagatggggtttcaccatgttggccaggctggtctttaactcttgccctcgagtgatccacccgccttggcctcccaaagtgttagga-ttacagg--cttgagccaccatgcctggccT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394565 298 + 96509753 -------tttttc-tttttttcttaaagatggagtctcaccctgttgcccaggctggagggcagtggcgtgatcttggctccctgcaacctccgcctcccgggttc-agcaattctcctgccttagcct-ccaagtagctgagattacaggcttgtgccaccacacctggctaatttttgtatctttagtggagatggggtttcaccatgttggccaggctggtctttaactcttgccctcgagtgatccacccgccttggcctcccaaagtgttagga-ttacagg--cttgagccaccatgcctggccT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865578 298 - 16982598 -------tttttc-tttttttcttaaagatggagtctcaccctgttgcccaggctggagggcagtggcgtgatcttggctccctgcaacctctgcctcccgggttc-agcaattctcctgccttagcct-ccaagtagctgagattacaggcttgtgccaccacacctggctaatttttgtatctttagtggagatggggtttcaccatgttggccaggctggtctttaactcttgccctcgagtgatccacccgccttggcctcccaaagtgttagga-ttacagg--cttgagccaccatgcctggccT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666674 299 - 3785965 -------tttttctttttttttttaaagatggagtctcaccctgttgcccaggctggagggcagtggcgtgatcttggctccctgcaacctccgcctcccgggttc-agcaattctcctgccttagcct-ccaagtagctgagattacaggcttgtgccaccacacctggctaatttttgtatctttagtggagatggggtttcaccatgttggccaggctggtctttaactcttgccctcgagtgatccacccgccttggcctcccaaagtgttagga-ttacagg--cttgagccaccatgcctggccT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 51799 298 - 179258 -------tttttc-ttttttttttaaagatggagtctcaccctgttgcccaggctggagggcagtggcgtgatcttggctccctgcaacctccgcctcctgggttc-agcaattctcctgccttagcct-ccaagtagctgagattacaggcttgtgccaccacacctggctaatttttgtatctttagtggagatggggtttcaccatgttggccaggctggtctttaactcttgtcctcgagtgatccacccgccttggcctcccaaagtgttagga-ttacagg--cttgagccaccatgcctggccT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537633 299 - 5823884 -------tttttctttttctttttaaagatggagtctcaccctgttgcccaggctggagggcagtggcgtgatcttggctcactgcagcctccgcctactgggttc-agcaattctcctgcctcggcct-ctgagtagctgagattacaggcttgtgccaccacacctggctaattcttgtatctttattggagatggggtttcaccatgttggccaggctggtctttaactcccgccctcaagtgatccatccgccttggcctcccaaagtgttagga-ttacagg--cttgagccaccatgcctggccT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21258 287 + 372756 --------ttttt-atctttttttaaagatggggtctcgggctgttgcccaggctggagtgcagt------gtctcggctcattgcaacctccgcctactggtttt-agtaattctgc-gcctcggcct-ccgagtagctgggattacaggcatgcgccacctcacctggctaatttttgtatctttagtagagacggggtttcatcatgttggccaggctggtcttgaactcctgacctcaagtgatccagccatcttggcctcccaaagtgctggga-tcacagg--cgtgagccactgtgcccag--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16258653 287 + 16356641 --------ttttt-atcttttttaaaagatggggtctcgggctgttgcccaggctggagtgcaac------atcttggctcattgcaacctccgcctactgggttt-agcaattctgc-gccttggcct-ccgagtagctgggattacaggcatgcgccagctcacctggctaatttttgtacctttagcagagacgcggtttcatcatgttggccaggctgggcttgaactcctgacctcaagtgatccagccatcttggcctcccaaagtgctggga-tcacagg--catgagccactgtgcccag--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1127779 287 + 1231380 --------tttct-atcttttttaaaagacggggtctcaggctattgcccaggctgcagtgcagc------atctcagctcattgcaacctctgcctactgggttt-agcaattctgc-acctcggcct-ccgagtagctgggattataggcatgcgccacctcccctggctaatttttgtatctttagtagagatggggtttcgtcatgttggccaggctggtcttgaactcctgacctcaagtgatccagccgtcttggcctcccaaagtgctgaga-tcacagg--catgagccactgtgcccag--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656226 287 + 11732439 --------TTTAC-Atctttttttaaagacggggtctcgggctgttgcccaggctggagtgcaac------atctcggctcattgcaacctccgcctactggattt-agcagttctgc-gcctcggcct-ccgagtagctgggattacaggcatgttccacctcacccggctaatttttgtatctttagtagagacgaggtttcttcatgttggccaggctggtcttgaactcccgacctctagtgatccagccatcttggcctcccaaaatgctggga-ttacagg--cataaaccactgtgcccag--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22821751 277 + 22939663 --------------ttttttttttttagacagagtcttacttagtcatcctcaatagagtgctgtggt---gtcatagctcacagaaacctcaaactcttgggctcaagtgatcctcttgcctcagcctgccaagtagatgagactacaggcgcccaccacaatgctcggctagtttt------------agagacgaggtcttgc--ttttgctcaggctggtctcaaactcttgaacacaggcaggccacctgcctcagtctcccagagtgctaaga-ttacagg--tgtgagcctttgtgtctggctt i otoGar3.GL873542 C 0 I 219 e proCoq1.NW_012150197v1 1834475 840 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181772685 168 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I a score=562778.000000 s hg38.chr20_KI270870v1_alt 81620 64 + 183433 CATACCCTCTTAATTCTTATCTTGCATCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCACA s panTro5.chr20 66312498 64 + 66533130 CATACCCTCTTAATTCTTATCTTGCATCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086568 64 + 62195757 CATACCCTCTTAATTCTTATCTTGCATCTGGAATACCTTTTGGACCAGGCCTGTTTCCATCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 471949 64 - 578057 CATACCCTCTTAATTCTTATCTTGCATCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000572 64 - 110113093 CATACCCTCTTCATTCTTATCTTGCGTCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726885 64 - 92844088 CATACCCTCTTAATTCTTATCTTGCATCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394863 64 + 96509753 CATACCCTCTTAATTCTTATCTTGCATCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865876 64 - 16982598 CATACCCTCTTAATTCTTATCTTGCATCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3666973 64 - 3785965 CATACCCTCTTAATTCTTATCTTGCATCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCGCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52097 64 - 179258 CATACCCTCTTAATTCTTATCTCGCATCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537932 64 - 5823884 CATACCCTCTTAATTCTTATCTTGCGTCTGGAATGCCTGTTGGGCCAGGCCTGTTTCCATCGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21545 59 + 372756 -----ccTCTTAACTCTCATCCTGCATCTGGAATACCTGTTGGACCAGGCCTGTTTCCATCGCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16258940 59 + 16356641 -----ccTCTTAACTCTCACCTTGCCTCTGGAATGCCTGTTGGACCAGGCCTGTTTCCATCGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128066 59 + 1231380 -----ccTCTTAACTCTTACCTTGCATCTGGAATGCCTGTTGGACCAGGCCTGTTTCCATTGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656513 59 + 11732439 -----ccTCTTAACTCTCATCTTGCATCTGGAATACCTGTTGGACCAGGCTTGTTTCCATTGCA i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1834475 840 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181772685 168 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22822028 219 + 22939663 I a score=380451.000000 s hg38.chr20_KI270870v1_alt 81684 40 + 183433 GCCCCTTCTTATTGCCTTTGTGTTCTCTGTGTTCTACCCC s panTro5.chr20 66312562 40 + 66533130 GCCCCTTCTTATTGCCTTTGTGTTCTCTGTGTTCTACCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086632 40 + 62195757 GCCCCTTCTTATTGCCTTTGTGTTCTCTGTGTTCTACCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472013 40 - 578057 GCCCCTTCTTATTGCCTCTGTTTTCTCTGTGTTCTACCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000636 40 - 110113093 GCCCCTTCTTACTACCTTTGTTTTCTCTGTGTTCTCCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726949 40 - 92844088 GCCCCTTCTTACTGCCTTTGTTTTCTCTGTGTTCTCCCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394927 40 + 96509753 GCCCCTTCTTACTGCCTTTGTTTTCTCTGTGTTCTCCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865940 40 - 16982598 GCCCCTTCTTACTGCCTTTGTTTTCTCTGTGTTCTCCCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667037 40 - 3785965 GCCCCTTCTTACTGCCTTTGTTTTCTCTGTGTTCTCCCCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52161 40 - 179258 GCCCCTTCTTACTGCCTTTGTTTTCTCTGTGTTCTCCCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5537996 40 - 5823884 GCCCCTTCTTACTGCCTTTGTTTCCTCCGTGTTCTCCCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21604 39 + 372756 GCCCCTTCTTACTGCCTTTGTTTTCTCTGTGTTCTCCCC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16258999 39 + 16356641 GCCCCTTCTTACTGCCTTTGTTTTCTCTGTGTTCTCACC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128125 39 + 1231380 GCCCCTTCTTACTGCCTTTGCTTTCTCTGTGTTCTCCCC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656572 39 + 11732439 GCCCCTTCTTACCGCCTTTGTTTTCTCTGTGTGCTCCCC- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1835315 40 - 2029793 GCCCCTTCCCATTGCCTTTGTTTTCTCTGTGTCCCCACCC i proCoq1.NW_012150197v1 I 840 C 0 e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181772685 168 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22822028 219 + 22939663 I a score=39009.000000 s hg38.chr20_KI270870v1_alt 81724 9 + 183433 TTCCCATAC s panTro5.chr20 66312602 9 + 66533130 TTCCCATAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086672 9 + 62195757 TTCCCATAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472053 9 - 578057 TTCCCATAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000676 9 - 110113093 TTCCCATAC i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3667077 9 - 3785965 TTCCCATAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52201 9 - 179258 TTCCCATAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538036 9 - 5823884 TTCCCATAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21643 9 + 372756 CATCTGTAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259038 9 + 16356641 CGTCTGTAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128164 9 + 1231380 CGTCTGTAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656611 9 + 11732439 TGTCTGTAC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1835355 9 - 2029793 TGCCCATGC i proCoq1.NW_012150197v1 C 0 C 0 e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181772685 168 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e macNem1.NW_012014244v1 16865980 0 - 16982598 C e rheMac8.chr10 92726989 0 - 92844088 C e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96394967 0 + 96509753 C a score=439214.000000 s hg38.chr20_KI270870v1_alt 81733 66 + 183433 CCCAGGATTCAGGCAGGCGAGTCCAGTTGTGCCTGATTGGAAAAAGTGTCTCTGATGGTGGCCCAG s panTro5.chr20 66312611 66 + 66533130 CCCAGGATTCAGGCAGGCGAGTCCAGTTGTGCCTGATTGGAAAAAGTGTCTCTGATGGTGGCCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086681 66 + 62195757 CCCAGGATTCAGGCAGGCGAGTCCAGTTGTGCCTGATTGGAAAAAGTGTCTCTGATGGTGGCCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472062 64 - 578057 CCCAGGATTCAGGCAGGCGAGTCCAGTTGTGCCTGATTGGAAAAA--GTCTCTGATGGTGGCCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000685 66 - 110113093 CCCAGGATTCAGGCAGGCGAGTCCAGTTGTGCCTGATTGGAAAAAGGGTCTCTGATGGTAGCCCAG i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3667086 66 - 3785965 CCCAGGATTCAGGCAGGTGAGTCCAGTTGTGCCTGATCTGAAAAAGTGTCTCTGATGGTGGCCTAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52210 66 - 179258 CCCAGGATTCAGGCAGGTGAGTCCAGTTGTGCCTGATCTGAAAAAGTGTCTCTGATGGTGGCCTAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538045 66 - 5823884 CGCAGGATTCAGGCAGGTGAGTCCAGTTGTGCCTGATCTGGAAAAGTGTCTCTGATGGTGGCCTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21652 66 + 372756 CCCGGGATTCAGGCAAGCAAGTCTAGTTGTGCCTGATCTGAAAAAGGGTCTCTGATGGTGGCCCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259047 66 + 16356641 CCCAGGATTCAAGCAGGCAAGTCTGGCTGTGCCTGATCTGAAAAAGTGTCTCTGATGGTGGCCCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128173 66 + 1231380 CCTGGGATTCAGGCAGGCAAGTCTAGCTGTGCCTGATCTGAAAAAGTGTCTCTGATGGTGGCCCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656620 66 + 11732439 CCCGGGATTCAGGCCTGCAAGTCTAGTTGTGCCTGATCTGAAAAAGTGTCTCTGATGGTGGCCCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1835364 66 - 2029793 CCCAGGATTCAAACAGGTGAGTCCAGTCCTGCCTGGTCTGAAAAGGGGTCTGTGATGGTGGCCCAG i proCoq1.NW_012150197v1 C 0 I 556 s mm10.chr2 181772853 64 + 182113224 CTCAGGGTTCACATA-GCAAATCTTTTGGTGCCTGGTCTCAAAAGATGTTT-TGGTGATGACTCAG i mm10.chr2 I 168 C 0 e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e macNem1.NW_012014244v1 16865980 0 - 16982598 C e rheMac8.chr10 92726989 0 - 92844088 C e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96394967 0 + 96509753 C a score=162914.000000 s hg38.chr20_KI270870v1_alt 81799 32 + 183433 TGAGGCAAGGCCCATGGGTCAGCCTGGCCAAT s panTro5.chr20 66312677 32 + 66533130 TGAGGCAAGGCCCATGGGTCAGCCTGGCCACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086747 32 + 62195757 TGAGGCAAGGCCCATGGGTCAGCCTGGCCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472126 32 - 578057 TGAAGCAAGACCCATGGGTCAGCCTGGCCACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000751 32 - 110113093 TGAGGCAAGGCCCATGGGTCAGCCTGGCCACT i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3667152 32 - 3785965 TGAGGCAAGGCCCATGGGTGAGCCTGGCCACC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52276 32 - 179258 TGAGGCAAGGCCCATGGGTGAGCCTGGCCACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538111 32 - 5823884 TGAGGCAAGGCCCATGGGTCAGCCTGGCCAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21718 31 + 372756 TGAGGCAGGG-CCATGGGTCAGCCTGGCTACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259113 31 + 16356641 TGAGGCAGGG-TCATGGGTCAGCCTGGTCACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128239 31 + 1231380 TGAGGCAGGG-CCATGGGCCAGCCTGGCCGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656686 31 + 11732439 CGAGGCAGGG-CCATGGGTCAGCCTGGCTACC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181772917 26 + 182113224 TGAAG------CCAGATATCAGCCTTGTTATC i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e macNem1.NW_012014244v1 16865980 0 - 16982598 C e rheMac8.chr10 92726989 0 - 92844088 C e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96394967 0 + 96509753 C a score=1253153.000000 s hg38.chr20_KI270870v1_alt 81831 152 + 183433 ---TTCCCTCCCCTCCTGAGCACCGTGGGAGGGTCAGGCCTCAAGCAGCCCTCGGAGGCAGCAGTCACAGACAGAGGTGGGCTGTTGGACAGGTGCGGCTGATAGAGTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA s panTro5.chr20 66312709 152 + 66533130 ---TTCCCTCCCCTCCTGAGCACCGTGGGAGGGTCAGGCCTCAAGCAGCCCTCGGAGGCAGCAGTCACAGACAGAGGTGGGCTGTTGGACAGGTGCGGCTGATAGAGTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086779 152 + 62195757 ---TTCCCTCCCCTCCTGAGCACAGTGGGAGGGTCAGGCCTCAAGTAGCCCTCGGAGGCAGCAGTCACAGACAGAGGTGGGCTGTTGGACAGGTGCGGCTGATAGAGTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472158 152 - 578057 ---TTCCCTCCCCTCCTGAGCACCGTGGGAGGGTCAGGCCTCAAGCAGCCCTTGGAGGCAGCAGTCACAGACAGAGGTGGGCTGTTGGGCAGGTGCGGCTGATAGAGTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000783 152 - 110113093 ---TTTCCTCCCCTCCTGAGTACTGTGGGTGGGTCAGGCCTCGAGCAGCCCTTGGAGGCAGCAGTCACAGACAGAGGTGGGCTGTTGAGCAGGTGCGGCTGATAGAGTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92726989 152 - 92844088 ---TTCCCTCCCCTCCTGAGCACCATGGGAGGGTCAGGCCTCGAGCAGCCCTTGGAGGCAGCAGCCACAGACAGAGGTGGGCTGGTGGGCAGGTGCGGCTGATAGACTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96394967 152 + 96509753 ---TTCCCTCCCCTCCTGAGCACCATGGGAGGGTCAGGCCTCGAGCAGCCCTTGGAGGCAGCAGCCACAGACAGAGGTGGGCTGGTGGGCAGGTGCGGCTGATAGACTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16865980 152 - 16982598 ---TTCCCTCCCCTCCTGAGCACCATGGGAGGGTCAGGCCTCGAGCAGCCCTTGGAGGCAGCAGCCACAGACAGAGGTGGGCTGGTGGGCAGGTGCGGCTGATAGACTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667184 152 - 3785965 ---TTCCCTCCCCTCCTGAGCACCATGGGTGGGTCAGGCCTCGAGCAGCCCTTGGAGGCAGCAGCCACAGACAGAGGTGGGCTGGTGGGCAGGTGCGGCTGATAGAGTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52308 152 - 179258 ---TTCCCTCCCCTCCTGAGCACCATGGGTGGGTCGGGCCTCGAGCAGCCCTTGGAGGCAGCAGCCACAGACAGAGGTGGGCTGGTGGGCAGGTGCGGCTGATAGAGTGGGTGTCTTTTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538143 150 - 5823884 ---TTCCCTCCCCTCCTGAGCACCGTGGGTGGGTCAGGCCTCAAGCAGCCCTTGGAGGCAGCAGCCACAGACAGAGGTGGGCTGGTGGGCAGGTGCGGCTGATAGTGTGGGTGTC--CTGTGGGCTTCTCCCCAGCCTGTGGCCTGGCCTAGTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21749 133 + 372756 ---TTCCCTCCCTTCCTGAGCACTGTGGGTGGGTCAGGCCTCAGGCAGCCCTGGGAGGCAGCAGCCACAGACGGAGGTGGGCTGGTGGGCAGGTGTGGCTGACAGAGTGGATGTCTTT-------------------TGTGGCCTGGCCTGGTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259144 133 + 16356641 ---TTCCCTCCTGTCCTGAGCACTGTGGGTGGGTCAGGCCTCAGGCAGCCCCGGGAGGCAGCAGCCACAGACAGAGGTGGGCTGGTGGGCAGGTGTGGCCGACAGTGTAGATGTCTTT-------------------TGTGGACTGGCCTGGTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128270 133 + 1231380 ---TTCCCTCCCGTCCTGAGCACTGGGGGTGGGTCAGGCCTCAGGCAGCCCTGGGAGGCAGCAGCCACAGACAGAGATGGGCTGGTGGGCAGGTGTGGCTGACAGCGTGGATGTCTTT-------------------AGTGGCCTGGCCTGGTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656717 133 + 11732439 ---TCCCCTCCCGTCCTGAGCACTGTGGGTGGGTCAGGCCTCAGGCAGCCCTGGGAGGCAGCAGCCACAGACAGAGGTGGGCTGGTGGGCAGGTGTGGCTGACAGAGTGGATGTCTTT-------------------TGTGGCCTGGCCTGGTCA i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181772943 106 + 182113224 TTGTCACCTGCTTTCCTAA--------------------CCTAACCACCTCTTCAGGGAA--AGCTGCAAG-------GGGATGGTAGGCA--------------------TTATTTCCCTGGGGCTGTCCGTAGCCTGTGGCTTGGCCTGATCA i mm10.chr2 C 0 I 51 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22822028 219 + 22939663 I a score=355585.000000 s hg38.chr20_KI270870v1_alt 81983 47 + 183433 GTAGAGATGGTCAGGGGAGCAGGAGGGAG-CCCATACCCCAGTGCCTG s panTro5.chr20 66312861 47 + 66533130 GTAGAGATGGTCAGGGGAGCAGGAGGGAG-CCCGTACCCCAGTGCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086931 47 + 62195757 GTAGAGATGGTCAGGGGAGCAGGAGGGAG-CCCATACCCCAGTGCCTG i panPan2.chr20 C 0 I 50 s gorGor5.CYUI01015848v1 472310 47 - 578057 TTAGAGATGGTCAGGGGAGCAGGAGGGAG-CCCGTACCCCAGTGCCTG i gorGor5.CYUI01015848v1 C 0 I 50 s nomLeu3.chr13 110000935 46 - 110113093 GTAGAGATGGTCA-GGGAGGAGGAGGGAG-CCCGTACCCCAGTGCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727141 48 - 92844088 GGAGAGATGGTCAGGGGAGCAGGAGGGAGCCCCTTACCCCAGTGCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395119 48 + 96509753 GGAGAGATGGTCAGGGGAGCAGGAGGGAGCCCCTTACCCCAGTGCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866132 48 - 16982598 GGAGAGATGGTCAGGGGAGCAGGAGGGAGCCCCTTACCCCAGTGCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667336 48 - 3785965 GGAGAGATGGTCAGGGGAGCAGGAGGGAGCCCCTTACCCCAATGCCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52460 48 - 179258 GGAGAGATGGTCAGGGGAGCAGGAGGGAGCCCCTTACCCCAGTGCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538293 48 - 5823884 GGAGAGATGGTCAGGGGAGCAGGAGGGAGCCCCTTACCCCAGTGCCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21882 46 + 372756 GTGGAGATGGTCAGGGGAGCAGG-GGGAG-CCCCCAGCCCAGTGCCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259277 44 + 16356641 GTGGAGATGGTCAGGGGAGCA---GGGAG-CCCCCAGCCCAGTGCCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128403 46 + 1231380 GTGGAGATGGTCAGGGTAGCAGG-GGGAG-CCACCAGCCCAGTGCCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656850 46 + 11732439 GTGGAGACGGTCAGGGGAGCAGG-GGGAG-CCCTCAGCCCGGTGCCTG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e otoGar3.GL873542 22822028 219 + 22939663 I a score=72984.000000 s hg38.chr20_KI270870v1_alt 82030 11 + 183433 TAGTTGTGTCC s panTro5.chr20 66312908 11 + 66533130 TAGTTGTGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087028 11 + 62195757 TAGTTGTGTCC i panPan2.chr20 I 50 C 0 s nomLeu3.chr13 110000981 11 - 110113093 TAGTTGTGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727189 11 - 92844088 TAGTTGTGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395167 11 + 96509753 TAGTTGTGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866180 11 - 16982598 TAGTTGTGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667384 11 - 3785965 TAGTTGTGTCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52508 11 - 179258 TAGTTGTGTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538341 11 - 5823884 TAGTTGTGTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21928 11 + 372756 AAGCTGTGTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259321 11 + 16356641 CTGCTGTGCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128449 11 + 1231380 CCGCTGCGCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2656896 11 + 11732439 CAGCTGCGTCC i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 472357 50 - 578057 I e otoGar3.GL873542 22822028 219 + 22939663 I a score=15910.000000 s hg38.chr20_KI270870v1_alt 82041 4 + 183433 ATTT s panTro5.chr20 66312919 4 + 66533130 ATTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087039 4 + 62195757 ATTT i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110000992 4 - 110113093 ATTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727200 3 - 92844088 -TTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395178 3 + 96509753 -TTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866191 3 - 16982598 -TTT i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5538352 3 - 5823884 -ATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21939 4 + 372756 ATTT i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16259332 4 + 16356641 ATTT i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1128460 4 + 1231380 ATTT i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2656907 4 + 11732439 ATTT i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 472357 50 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e otoGar3.GL873542 22822028 219 + 22939663 I a score=15190.000000 s hg38.chr20_KI270870v1_alt 82045 3 + 183433 CCC s panTro5.chr20 66312923 3 + 66533130 TCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087043 3 + 62195757 CCC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110000996 3 - 110113093 CCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727203 3 - 92844088 CCC i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96395181 3 + 96509753 CCC i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16866194 3 - 16982598 CCC i macNem1.NW_012014244v1 C 0 I 2 s colAng1.NW_012114444v1 5538355 3 - 5823884 CCC i colAng1.NW_012114444v1 C 0 I 2 s calJac3.chrUn_GL286459 21944 3 + 372756 CCC i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16259337 3 + 16356641 CCC i saiBol1.JH378156 I 1 C 0 s aotNan1.NW_018500483v1 2656911 3 + 11732439 CCC i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 472357 50 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e otoGar3.GL873542 22822028 219 + 22939663 I a score=80184.000000 s hg38.chr20_KI270870v1_alt 82048 20 + 183433 CTCCCTGACTTCTCCTCCTG s panTro5.chr20 66312926 20 + 66533130 CTCCCTGACTTCTCCTCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087046 20 + 62195757 CTCCCTGGCTTCTCCTCCTG i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110000999 20 - 110113093 ATCCCTGACTTCTCCTCCTG i nomLeu3.chr13 C 0 T 42 s rheMac8.chr10 92727208 20 - 92844088 CTCCCTGGCTTCTCCTCCTG i rheMac8.chr10 I 2 C 0 s macNem1.NW_012014244v1 16866199 20 - 16982598 CTCCCTGGCTTCTCCTCCTG i macNem1.NW_012014244v1 I 2 C 0 s colAng1.NW_012114444v1 5538360 20 - 5823884 CTCCCTGGCCTCTCCTCCTG i colAng1.NW_012114444v1 I 2 C 0 s calJac3.chrUn_GL286459 21947 20 + 372756 CTCCCTGGCTTCTCTTCCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259340 20 + 16356641 CTCCCTGGCTTCTCCTCCTG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2656914 20 + 11732439 CTCCCTGGCTTCTCCTCCTG i aotNan1.NW_018500483v1 C 0 I 14 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 472357 50 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=6325.000000 s hg38.chr20_KI270870v1_alt 82068 4 + 183433 CAGC s panTro5.chr20 66312946 4 + 66533130 CAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087066 4 + 62195757 CAGC i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92727228 4 - 92844088 TAGC i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866219 4 - 16982598 TAGC i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5538380 4 - 5823884 TAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21967 4 + 372756 TTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259360 4 + 16356641 TTGC i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 472357 50 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001019 42 - 110113093 T e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=7730.000000 s hg38.chr20_KI270870v1_alt 82072 7 + 183433 ATCCTTC s panTro5.chr20 66312950 7 + 66533130 ATCTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087070 7 + 62195757 ATCTTTC i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92727232 7 - 92844088 ATCGTTC i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866223 7 - 16982598 ATCGTTC i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5538384 7 - 5823884 ATCGTTC i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 472357 50 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001019 42 - 110113093 T e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=2100.000000 s hg38.chr20_KI270870v1_alt 82079 1 + 183433 C s panTro5.chr20 66312957 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087077 1 + 62195757 C i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110000977 1 - 110113093 C i nomLeu3.chr13 T 42 C 0 s rheMac8.chr10 92727239 1 - 92844088 C i rheMac8.chr10 C 0 I 6 s macNem1.NW_012014244v1 16866230 1 - 16982598 C i macNem1.NW_012014244v1 C 0 I 6 s colAng1.NW_012114444v1 5538391 1 - 5823884 C i colAng1.NW_012114444v1 C 0 I 12 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 472357 50 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=183.000000 s hg38.chr20_KI270870v1_alt 82080 3 + 183433 CTT s panPan2.chr20 62087078 3 + 62195757 TTG i panPan2.chr20 C 0 T 53 s nomLeu3.chr13 110000978 3 - 110113093 CTG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 472357 50 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66312958 0 + 66533130 C e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=38917.000000 s hg38.chr20_KI270870v1_alt 82083 49 + 183433 TAGTTGTGT-CCATTTCCCCTCCCTGACTTCTCCTCCTGCAGCATCCTTC s panTro5.chr20 66312958 49 + 66533130 TAGTTGTGT-CCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087028 49 + 62195757 TAGTTGTGT-CCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTC i panPan2.chr20 T 53 C 0 s gorGor5.CYUI01015848v1 472407 47 - 578057 TAGTTGTGTCCCATTTCCCCTCCCTGACTT---CTCCTGCAGCATCTTTC i gorGor5.CYUI01015848v1 I 50 C 0 s nomLeu3.chr13 110000981 49 - 110113093 TAGTTGTGT-CCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTC i nomLeu3.chr13 C 0 T 53 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=2259.000000 s hg38.chr20_KI270870v1_alt 82132 4 + 183433 CCTT s panTro5.chr20 66313007 4 + 66533130 CTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087077 4 + 62195757 CTTG i panPan2.chr20 C 0 T 103 s gorGor5.CYUI01015848v1 472454 4 - 578057 CCTG i gorGor5.CYUI01015848v1 C 0 T 101 s nomLeu3.chr13 110000977 4 - 110113093 CCTG i nomLeu3.chr13 T 53 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=45599.000000 s hg38.chr20_KI270870v1_alt 82136 51 + 183433 TAGTTGTGTCCATTTCCCCTCCCTGACTTCTCCTCCTGCAGCATCTTTCCT s panTro5.chr20 66313011 51 + 66533130 TAGTTGTGTCCATTTTCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62086978 51 + 62195757 TAGTTGTGTCCATTTTCCCTCCCTGACTTCTCCTCCTGCAGCATCTTTCCT i panPan2.chr20 T 103 C 0 s gorGor5.CYUI01015848v1 472357 51 - 578057 TAGTTGTGTCCATTTCCCCTCCCTGACTTCTCCTCCTGCAGCATCTTTCCT i gorGor5.CYUI01015848v1 T 101 C 0 s nomLeu3.chr13 110000981 51 - 110113093 TAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTCCT i nomLeu3.chr13 C 0 T 50 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=37170.000000 s hg38.chr20_KI270870v1_alt 82187 48 + 183433 AGTTGTGT-CCATTTCCCCTCCCTGACTTCTCCTCCTGCAGCATCTTTC s panTro5.chr20 66313062 47 + 66533130 AGTTGTGT-CCATTTCCCCTCCCTGACTTCTCCT-CTGCAGCATCTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087029 48 + 62195757 AGTTGTGT-CCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472408 46 - 578057 AGTTGTGTCCCATTTCCCCTCCCTGACTTCTC---CTGCAGCATCTTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000982 48 - 110113093 AGTTGTGT-CCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTC i nomLeu3.chr13 T 50 T 53 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=45557.000000 s hg38.chr20_KI270870v1_alt 82235 54 + 183433 CTTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC s panTro5.chr20 66313109 54 + 66533130 CCTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087077 54 + 62195757 CTTGTAGTTGTGTCCATTTTCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 C 0 I 103 s gorGor5.CYUI01015848v1 472454 53 - 578057 CCTGTAGTTGTGTCCATTTCCCCTCCCTGGC-TCTCCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000977 54 - 110113093 CCTGTAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTCC i nomLeu3.chr13 T 53 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=29.000000 s hg38.chr20_KI270870v1_alt 82289 1 + 183433 T s gorGor5.CYUI01015848v1 472507 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001031 1 - 110113093 T i nomLeu3.chr13 C 0 T 53 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087131 103 + 62195757 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313163 0 + 66533130 C e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=573.000000 s hg38.chr20_KI270870v1_alt 82290 2 + 183433 TG s gorGor5.CYUI01015848v1 472508 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000979 2 - 110113093 TG i nomLeu3.chr13 T 53 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087131 103 + 62195757 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313163 0 + 66533130 C e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=41972.000000 s hg38.chr20_KI270870v1_alt 82292 50 + 183433 TAGTTGTGTCCATTTCCCCTCCCTGACTTCTCCTCCTGCAGCATCCTTCC s panTro5.chr20 66313163 50 + 66533130 TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087234 50 + 62195757 TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 I 103 C 0 s gorGor5.CYUI01015848v1 472510 49 - 578057 TAGTTGTGTCCA-TTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000981 50 - 110113093 TAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTCC i nomLeu3.chr13 C 0 T 50 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=15969.000000 s hg38.chr20_KI270870v1_alt 82342 37 + 183433 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT s panTro5.chr20 66313213 40 + 66533130 TTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087284 37 + 62195757 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT i panPan2.chr20 C 0 T 100 s gorGor5.CYUI01015848v1 472559 37 - 578057 CTGTAGTTGTGTCCATTTCCCTCCCTGCTCTC---CTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=44682.000000 s hg38.chr20_KI270870v1_alt 82379 91 + 183433 GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTG s panTro5.chr20 66313253 91 + 66533130 GCAGCATCCTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC---TAGTTGTGTCCATTTCCCCTCCCTG i panTro5.chr20 C 0 T 103 s panPan2.chr20 62087221 91 + 62195757 GCAGCATCTTTCC---TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTG i panPan2.chr20 T 100 C 0 s gorGor5.CYUI01015848v1 472596 92 - 578057 GCAGCATCTTTCCC--TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCTCTCCCTG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=3714.000000 s hg38.chr20_KI270870v1_alt 82470 9 + 183433 GCTT---CTCCT s panTro5.chr20 66313241 12 + 66533130 GCTTCTCCTCCT i panTro5.chr20 T 103 C 0 s panPan2.chr20 62087312 9 + 62195757 GCTT---CTCCT i panPan2.chr20 C 0 T 37 s gorGor5.CYUI01015848v1 472688 9 - 578057 GCTT---CTCCT i gorGor5.CYUI01015848v1 C 0 I 3 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=3494.000000 s hg38.chr20_KI270870v1_alt 82479 13 + 183433 GCAGCATCTTTCC s panTro5.chr20 66313253 13 + 66533130 GCAGCATCCTTCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472700 13 - 578057 GCAGCATCTTTCC i gorGor5.CYUI01015848v1 I 3 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087321 37 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=13332.000000 s hg38.chr20_KI270870v1_alt 82492 32 + 183433 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT s panTro5.chr20 66313266 32 + 66533130 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT i panTro5.chr20 C 0 T 103 s panPan2.chr20 62087284 32 + 62195757 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT i panPan2.chr20 T 37 C 0 s gorGor5.CYUI01015848v1 472713 28 - 578057 CTGTAGT--TGTCCATT--CCCCTCCTGACTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=2892.000000 s hg38.chr20_KI270870v1_alt 82524 5 + 183433 CTCCT s panTro5.chr20 66313195 5 + 66533130 CTCCT i panTro5.chr20 T 103 C 0 s panPan2.chr20 62087316 5 + 62195757 CTCCT i panPan2.chr20 C 0 T 50 s gorGor5.CYUI01015848v1 472741 5 - 578057 CTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=12966.000000 s hg38.chr20_KI270870v1_alt 82529 24 + 183433 GTAGCATCTTTCCCTGTAGTTGTG s panTro5.chr20 66313200 24 + 66533130 GCAGCATCTTTCCTTGTAGTTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087271 24 + 62195757 GCAGCATCTTTCCCTGTAGTTGTG i panPan2.chr20 T 50 C 0 s gorGor5.CYUI01015848v1 472746 24 - 578057 GCAGCATCTTTCCCTGTAGTTGTG i gorGor5.CYUI01015848v1 C 0 I 103 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=273.000000 s hg38.chr20_KI270870v1_alt 82553 1 + 183433 T s panTro5.chr20 66313224 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087295 1 + 62195757 T i panPan2.chr20 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 472770 103 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=10696.000000 s hg38.chr20_KI270870v1_alt 82554 20 + 183433 CCATTCCCCCTCCCTGGCTT s panTro5.chr20 66313225 20 + 66533130 CCATTTCCCCTCCCTGGCTT i panTro5.chr20 C 0 I 56 s panPan2.chr20 62087296 20 + 62195757 CCATTTCCCCTCCCTGGCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472873 20 - 578057 CCATTCCCCCTCCCTGACTT i gorGor5.CYUI01015848v1 I 103 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=1236.000000 s hg38.chr20_KI270870v1_alt 82574 5 + 183433 CTCCT- s panTro5.chr20 66313301 5 + 66533130 CTCCT- i panTro5.chr20 I 56 C 0 s panPan2.chr20 62087316 5 + 62195757 CTCCT- i panPan2.chr20 C 0 T 203 s gorGor5.CYUI01015848v1 472893 6 - 578057 CTCCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=10323.000000 s hg38.chr20_KI270870v1_alt 82579 22 + 183433 GTAGCATCTTTCC---TAGTTGTGT s panTro5.chr20 66313306 22 + 66533130 GCAGCATCTTTCC---TAGTTGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087118 22 + 62195757 GCAGCATCTTTCC---TAGTTGTGT i panPan2.chr20 T 203 C 0 s gorGor5.CYUI01015848v1 472899 25 - 578057 GCAGCATCTTTCCCTGTAGTTGTGC i gorGor5.CYUI01015848v1 C 0 T 154 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=7713.000000 s hg38.chr20_KI270870v1_alt 82601 16 + 183433 CCATTTCCCCTCCCTG s panTro5.chr20 66313328 16 + 66533130 CCATTTCCCCTCCCTG i panTro5.chr20 C 0 T 192 s panPan2.chr20 62087140 16 + 62195757 CCATTTCCCCTCCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472770 15 - 578057 CCA-TTCCCCTCCCTG i gorGor5.CYUI01015848v1 T 154 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=11138.000000 s hg38.chr20_KI270870v1_alt 82617 43 + 183433 GCTTCTCCT---GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCC s panPan2.chr20 62087156 46 + 62195757 GCTTCTCCTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCGTTTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472785 46 - 578057 ACTTCTCCTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCC i gorGor5.CYUI01015848v1 C 0 I 146 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 192 + 66533130 T e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=4287.000000 s hg38.chr20_KI270870v1_alt 82660 18 + 183433 CTCCCTGGCTTCTCCT---GT s panPan2.chr20 62087202 21 + 62195757 CTCCCTGGCTTCTCCTCCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472977 21 - 578057 CTCCCTGGCTTCTCCTCCTGC i gorGor5.CYUI01015848v1 I 146 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 192 + 66533130 T e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=6276.000000 s hg38.chr20_KI270870v1_alt 82678 11 + 183433 AGCATCTTTCC s panTro5.chr20 66313152 11 + 66533130 AGCATCTTTCC i panTro5.chr20 T 192 C 0 s panPan2.chr20 62087223 11 + 62195757 AGCATCTTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472998 11 - 578057 AGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=11989.000000 s hg38.chr20_KI270870v1_alt 82689 15 + 183433 TAGTTGTGTCCATTT s panTro5.chr20 66313163 15 + 66533130 TAGTTGTGCCCATTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087234 15 + 62195757 TAGTTGTGCCCATTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473009 15 - 578057 TAGTTGTGTGCATTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000981 15 - 110113093 TAGTTGTGTCCATTC i nomLeu3.chr13 T 50 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128464 1 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=4930.000000 s hg38.chr20_KI270870v1_alt 82704 4 + 183433 CCCC s panTro5.chr20 66313178 4 + 66533130 CCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087249 4 + 62195757 CCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473024 4 - 578057 CCCC i gorGor5.CYUI01015848v1 C 0 T 197 s nomLeu3.chr13 110000996 4 - 110113093 CCCA i nomLeu3.chr13 C 0 C 0 s cebCap1.NW_016107870v1 1128465 4 + 1231380 CCCC i cebCap1.NW_016107870v1 I 1 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=26900.000000 s hg38.chr20_KI270870v1_alt 82708 19 + 183433 TCCCTGGCTTCTCCTCCTG s panTro5.chr20 66313182 19 + 66533130 TCCCTGGCTTCTCCTCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087253 19 + 62195757 TCCCTGGCTTCTCCTCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472831 19 - 578057 TCCCTGGCTTCTCCTCCTG i gorGor5.CYUI01015848v1 T 197 C 0 s nomLeu3.chr13 110001000 19 - 110113093 TCCCTGACTTCTCCTCCTG i nomLeu3.chr13 C 0 C 0 s cebCap1.NW_016107870v1 1128469 19 + 1231380 TCCCTGGCTTCTCCTCCTG i cebCap1.NW_016107870v1 C 0 I 14 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=10936.000000 s hg38.chr20_KI270870v1_alt 82727 12 + 183433 CAGCATCTTTCC s panTro5.chr20 66313201 12 + 66533130 CAGCATCTTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087272 12 + 62195757 CAGCATCTTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472850 12 - 578057 CAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001019 12 - 110113093 TAGCATCTTTCC i nomLeu3.chr13 C 0 T 54 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=13870.000000 s hg38.chr20_KI270870v1_alt 82739 29 + 183433 CTGTAGTTGTGTCCATTCCCCCTCCCTGG s panTro5.chr20 66313213 29 + 66533130 TTGTAGTTGTGTCCATTTCCCCTCCCTGG i panTro5.chr20 C 0 I 53 s panPan2.chr20 62087284 29 + 62195757 CTGTAGTTGTGTCCATTTCCCCTCCCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 472862 28 - 578057 CTGTAGTTGTG-CCATTCCCCCTCCCTGA i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=1458.000000 s hg38.chr20_KI270870v1_alt 82768 8 + 183433 CTT---CTCCT- s panTro5.chr20 66313295 11 + 66533130 CTTCTCCTCCT- i panTro5.chr20 I 53 C 0 s panPan2.chr20 62087313 8 + 62195757 CTT---CTCCT- i panPan2.chr20 C 0 T 100 s gorGor5.CYUI01015848v1 472890 9 - 578057 CTT---CTCCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=16774.000000 s hg38.chr20_KI270870v1_alt 82776 38 + 183433 GTAGCATCTTTCC---TAGTTGTGTCCATTTCCCCTCCCTG s panTro5.chr20 66313306 38 + 66533130 GCAGCATCTTTCC---TAGTTGTGTCCATTTCCCCTCCCTG i panTro5.chr20 C 0 T 399 s panPan2.chr20 62087221 38 + 62195757 GCAGCATCTTTCC---TAGTTGTGCCCATTTCCCCTCCCTG i panPan2.chr20 T 100 C 0 s gorGor5.CYUI01015848v1 472899 39 - 578057 GCAGCATCTTTCCCTGTAGTTGTGCCCATTCCCCCTCCT-- i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=300.000000 s hg38.chr20_KI270870v1_alt 82814 1 + 183433 G s panPan2.chr20 62087259 1 + 62195757 G i panPan2.chr20 C 0 T 50 s gorGor5.CYUI01015848v1 472938 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 399 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=2292.000000 s hg38.chr20_KI270870v1_alt 82815 8 + 183433 CTTCTCCT s panPan2.chr20 62087210 8 + 62195757 CTTCTCCT i panPan2.chr20 T 50 I 3 s gorGor5.CYUI01015848v1 472939 8 - 578057 CTTCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 399 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=23544.000000 s hg38.chr20_KI270870v1_alt 82823 45 + 183433 GTAGCATCTTTCCTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTC s panTro5.chr20 66312945 45 + 66533130 GCAGCATCTTTCCTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTC i panTro5.chr20 T 399 C 0 s panPan2.chr20 62087221 45 + 62195757 GCAGCATCTTTCCTAGTTGTGCCCATTTCCCCTCCCTGGCTTCTC i panPan2.chr20 I 3 T 103 s gorGor5.CYUI01015848v1 472947 44 - 578057 GCAGCATCTTTCCTAGTTGTGTCCA-TTCCCCTCCCTGGCTTCTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=7166.000000 s hg38.chr20_KI270870v1_alt 82868 18 + 183433 CT---GCAGCATCTTTCCCTG s panTro5.chr20 66312990 21 + 66533130 CTCCTGCAGCATCTTTCCTTG i panTro5.chr20 C 0 I 152 s panPan2.chr20 62087163 21 + 62195757 CTCCTGCAGCATCTTTCCCTG i panPan2.chr20 T 103 C 0 s gorGor5.CYUI01015848v1 472991 18 - 578057 CTCCTGCAGCATCTTTCC--- i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=14844.000000 s hg38.chr20_KI270870v1_alt 82886 29 + 183433 TAGTTGTGTCCATTTCCCCTCCCTGGCTT s panTro5.chr20 66313163 29 + 66533130 TAGTTGTGCCCATTTCCCCTCCCTGGCTT i panTro5.chr20 I 152 I 3 s panPan2.chr20 62087184 29 + 62195757 TAGTTGTGTCCGTTTCCCCTCCCTGGCTT i panPan2.chr20 C 0 I 53 s gorGor5.CYUI01015848v1 473009 29 - 578057 TAGTTGTGTGCATTTCCCCTCCCTGACTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=25799.000000 s hg38.chr20_KI270870v1_alt 82915 55 + 183433 ---CTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT s panTro5.chr20 66313195 58 + 66533130 ---CTCCTGCAGCATCTTTCCTTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCT i panTro5.chr20 I 3 C 0 s panPan2.chr20 62087266 55 + 62195757 ---CTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT i panPan2.chr20 I 53 T 153 s gorGor5.CYUI01015848v1 473038 59 - 578057 CTCCTCCTGCAGCATCTTTCCCTGTAGTTGTG-CCATTCCCCCTCCCT-GCTTCTCCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=23538.000000 s hg38.chr20_KI270870v1_alt 82970 50 + 183433 GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT s panTro5.chr20 66313253 53 + 66533130 GCAGCATCCTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCT i panTro5.chr20 C 0 T 64 s panPan2.chr20 62087168 50 + 62195757 GCAGCATCTTTCCCTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTT---CTCCT i panPan2.chr20 T 153 T 50 s gorGor5.CYUI01015848v1 473097 47 - 578057 GCAGCATCTTTCC---TAGTTGTGTGCATTTCCCCTCCCTGGCTT---CTCCT i gorGor5.CYUI01015848v1 C 0 I 3 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=3176.000000 s hg38.chr20_KI270870v1_alt 83020 12 + 183433 GTAGCATCTTTC s panPan2.chr20 62087168 12 + 62195757 GCAGCATCTTTC i panPan2.chr20 T 50 C 0 s gorGor5.CYUI01015848v1 473147 12 - 578057 GCAGCATCTTTC i gorGor5.CYUI01015848v1 I 3 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313306 64 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=12513.000000 s hg38.chr20_KI270870v1_alt 83032 30 + 183433 CCTGTAGTTGTGTCCATTCCCCCTCCCTGA s panPan2.chr20 62087180 30 + 62195757 CCTGTAGTTGTGTCCGTTTCCCCTCCCTGG i panPan2.chr20 C 0 I 50 s gorGor5.CYUI01015848v1 473159 27 - 578057 C---TAGTTGTGTGCATTCCCCCTCCCTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000977 30 - 110113093 CCTGTAGTTGTGTCCATTCCCCATCCCTGA i nomLeu3.chr13 T 54 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313306 64 + 66533130 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=21998.000000 s hg38.chr20_KI270870v1_alt 83062 24 + 183433 CTTCTCCTCCTGCAGCATCTTTCC s panTro5.chr20 66313242 24 + 66533130 CTTCTCCTCCTGCAGCATCCTTCC i panTro5.chr20 T 64 C 0 s panPan2.chr20 62087260 24 + 62195757 CTTCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 I 50 C 0 s gorGor5.CYUI01015848v1 473186 24 - 578057 CTTCTCCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001007 24 - 110113093 CTTCTCCTCCTGTAGCATCTTTCC i nomLeu3.chr13 C 0 T 53 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=41118.000000 s hg38.chr20_KI270870v1_alt 83086 53 + 183433 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCGTCTCCTCCTGCAGCATCTTTCC s panTro5.chr20 66313266 53 + 66533130 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087284 53 + 62195757 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCTTCTAGCATCTTTCC i panPan2.chr20 C 0 T 156 s gorGor5.CYUI01015848v1 473210 49 - 578057 ---TAGTTGTGTGCATTT-CCCTCCCTGACTTCTCCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000978 53 - 110113093 CTGTAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTCC i nomLeu3.chr13 T 53 T 50 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=873.000000 s hg38.chr20_KI270870v1_alt 83139 3 + 183433 CTG s panPan2.chr20 62087181 3 + 62195757 CTG i panPan2.chr20 T 156 C 0 s gorGor5.CYUI01015848v1 473259 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 I 203 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313319 0 + 66533130 C e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=13986.000000 s hg38.chr20_KI270870v1_alt 83142 25 + 183433 TAGTTGTGTCCATTTCCCCTCCCTG s panTro5.chr20 66313319 25 + 66533130 TAGTTGTGTCCATTTCCCCTCCCTG i panTro5.chr20 C 0 T 192 s panPan2.chr20 62087184 25 + 62195757 TAGTTGTGTCCGTTTCCCCTCCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473465 25 - 578057 TAGTTGTGTCCATTTCCCCTCCCTG i gorGor5.CYUI01015848v1 I 203 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=1941.000000 s hg38.chr20_KI270870v1_alt 83167 11 + 183433 GCTTCTCCT---GT s panPan2.chr20 62087209 14 + 62195757 GCTTCTCCTCCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473490 11 - 578057 GCTTCTCCT---GT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 192 + 66533130 T e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=6276.000000 s hg38.chr20_KI270870v1_alt 83178 11 + 183433 AGCATCTTTCC s panTro5.chr20 66313152 11 + 66533130 AGCATCTTTCC i panTro5.chr20 T 192 C 0 s panPan2.chr20 62087223 11 + 62195757 AGCATCTTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473501 11 - 578057 AGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 T 250 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=44544.000000 s hg38.chr20_KI270870v1_alt 83189 50 + 183433 TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC s panTro5.chr20 66313163 50 + 66533130 TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087234 50 + 62195757 TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473262 50 - 578057 TAGTTGTGTCCATTTCCCCTCCCTGACTTCTCCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 T 250 C 0 s nomLeu3.chr13 110000981 50 - 110113093 TAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTCC i nomLeu3.chr13 T 50 T 54 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=1899.000000 s hg38.chr20_KI270870v1_alt 83239 4 + 183433 CTGT s panTro5.chr20 66313213 4 + 66533130 TTGT i panTro5.chr20 C 0 I 53 s panPan2.chr20 62087284 4 + 62195757 CTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473312 4 - 578057 CTGT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=15889.000000 s hg38.chr20_KI270870v1_alt 83243 33 + 183433 AGTTGTGTCCATTCCCCCTCCCTGGCTT---CTCCT s panTro5.chr20 66313270 36 + 66533130 AGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCT i panTro5.chr20 I 53 C 0 s panPan2.chr20 62087288 33 + 62195757 AGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT i panPan2.chr20 C 0 T 100 s gorGor5.CYUI01015848v1 473316 33 - 578057 AGTTGTGCCCATTCCCCCTCTCTGACTT---CTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=19206.000000 s hg38.chr20_KI270870v1_alt 83276 38 + 183433 GTAGCATCTTTCC---TAGTTGTGTCCATTTCCCCTCCCTG s panTro5.chr20 66313306 38 + 66533130 GCAGCATCTTTCC---TAGTTGTGTCCATTTCCCCTCCCTG i panTro5.chr20 C 0 T 96 s panPan2.chr20 62087221 38 + 62195757 GCAGCATCTTTCC---TAGTTGTGCCCATTTCCCCTCCCTG i panPan2.chr20 T 100 C 0 s gorGor5.CYUI01015848v1 473349 41 - 578057 GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCTCTG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=611.000000 s hg38.chr20_KI270870v1_alt 83314 3 + 183433 GCT s panPan2.chr20 62087259 3 + 62195757 GCT i panPan2.chr20 C 0 T 39 s gorGor5.CYUI01015848v1 473390 3 - 578057 ACT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 96 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=642.000000 s hg38.chr20_KI270870v1_alt 83317 8 + 183433 TCTCCTGT s gorGor5.CYUI01015848v1 473393 8 - 578057 TCTCCTGC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087262 39 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 96 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=10236.000000 s hg38.chr20_KI270870v1_alt 83325 40 + 183433 AGCATCTTTCC---TAGTTGTGTCCATTTCCCCTCCCTGGCTT s panPan2.chr20 62087223 40 + 62195757 AGCATCTTTCC---TAGTTGTGCCCATTTCCCCTCCCTGGCTT i panPan2.chr20 T 39 C 0 s gorGor5.CYUI01015848v1 473401 43 - 578057 AGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 96 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=1746.000000 s hg38.chr20_KI270870v1_alt 83365 3 + 183433 CTC s panTro5.chr20 66313248 3 + 66533130 CTC i panTro5.chr20 T 96 C 0 s panPan2.chr20 62087263 3 + 62195757 CTC i panPan2.chr20 C 0 T 203 s gorGor5.CYUI01015848v1 473444 3 - 578057 CTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=25467.000000 s hg38.chr20_KI270870v1_alt 83368 47 + 183433 CTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT s panTro5.chr20 66313251 47 + 66533130 CTGCAGCATCCTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT i panTro5.chr20 C 0 I 3 s panPan2.chr20 62087063 47 + 62195757 CTGCAGCATCTTTCCTTGTAGTTGTGTCCATTTTCCCTCCCTGGCTT i panPan2.chr20 T 203 I 156 s gorGor5.CYUI01015848v1 473447 47 - 578057 CTGTAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=9975.000000 s hg38.chr20_KI270870v1_alt 83415 18 + 183433 CTCCTGCAGCATCTTTCC s panTro5.chr20 66313301 18 + 66533130 CTCCTGCAGCATCTTTCC i panTro5.chr20 I 3 T 106 s panPan2.chr20 62087266 18 + 62195757 CTCCTGCAGCATCTTTCC i panPan2.chr20 I 156 C 0 s gorGor5.CYUI01015848v1 473494 18 - 578057 CTCCTGTAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=18152.000000 s hg38.chr20_KI270870v1_alt 83433 37 + 183433 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT s panTro5.chr20 66313213 40 + 66533130 TTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCT i panTro5.chr20 T 106 C 0 s panPan2.chr20 62087284 37 + 62195757 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT i panPan2.chr20 C 0 T 87 s gorGor5.CYUI01015848v1 473512 40 - 578057 CTGTAGTTGTGTGCATTTCCCCTCCCTGACTTCTCCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=4105.000000 s hg38.chr20_KI270870v1_alt 83470 16 + 183433 GTAGCATCTTTCCCTG s panTro5.chr20 66313253 16 + 66533130 GCAGCATCCTTCCCTG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473552 16 - 578057 GCAGCATCTTTCCCTG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087321 87 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=25656.000000 s hg38.chr20_KI270870v1_alt 83486 47 + 183433 TAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCTGCAGCATCTTTCC s panTro5.chr20 66313269 50 + 66533130 TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panTro5.chr20 C 0 T 119 s panPan2.chr20 62087234 50 + 62195757 TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 T 87 C 0 s gorGor5.CYUI01015848v1 473568 50 - 578057 TAGTTGTGTCCATTTCCTCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=873.000000 s hg38.chr20_KI270870v1_alt 83533 3 + 183433 CTG s panPan2.chr20 62087284 3 + 62195757 CTG i panPan2.chr20 C 0 T 156 s gorGor5.CYUI01015848v1 473618 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313319 119 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=17796.000000 s hg38.chr20_KI270870v1_alt 83536 97 + 183433 TAGTTGTGTCCATTTC---------------------------------CCCTCCCTGGCTTCTCCT---GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT---GTAGCATCTTTCC s panPan2.chr20 62087131 103 + 62195757 TAGTTGTGTCCATTTC---------------------------------CCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 T 156 T 103 s gorGor5.CYUI01015848v1 473621 131 - 578057 TAGTTGTG-CCATTCCCCTCTGATTCTCCTGCGCTTCCTTTTTTGCATTCCCTCCCTGACTTC-CCTCCTGCAGCATCTTTCC---TAGTTGTGTGCCTTTCCCCTCCCTGACTTCTTCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313319 119 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=291.000000 s hg38.chr20_KI270870v1_alt 83633 3 + 183433 CTG s gorGor5.CYUI01015848v1 473752 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087234 103 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313319 119 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=8378.000000 s hg38.chr20_KI270870v1_alt 83636 34 + 183433 TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT--- s panPan2.chr20 62087131 34 + 62195757 TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT--- i panPan2.chr20 T 103 I 3 s gorGor5.CYUI01015848v1 473755 37 - 578057 TAGTTGTGTCCATTTCCCCTCCCTGGCGTCTCCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313319 119 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=24768.000000 s hg38.chr20_KI270870v1_alt 83670 48 + 183433 GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTC--- s panTro5.chr20 66313200 48 + 66533130 GCAGCATCTTTCCTTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTC--- i panTro5.chr20 T 119 T 48 s panPan2.chr20 62087168 48 + 62195757 GCAGCATCTTTCCCTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTTCTC--- i panPan2.chr20 I 3 C 0 s gorGor5.CYUI01015848v1 473792 51 - 578057 GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCGTCTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=573.000000 s hg38.chr20_KI270870v1_alt 83718 2 + 183433 CT s panPan2.chr20 62087216 2 + 62195757 CT i panPan2.chr20 C 0 I 3 s gorGor5.CYUI01015848v1 473843 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313248 48 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=6483.000000 s hg38.chr20_KI270870v1_alt 83720 12 + 183433 GTAGCATCTTTC s panTro5.chr20 66313200 12 + 66533130 GCAGCATCTTTC i panTro5.chr20 T 48 C 0 s panPan2.chr20 62087221 12 + 62195757 GCAGCATCTTTC i panPan2.chr20 I 3 C 0 s gorGor5.CYUI01015848v1 473845 12 - 578057 GCAGCATCTTTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=1000.000000 s hg38.chr20_KI270870v1_alt 83732 1 + 183433 C s panTro5.chr20 66313212 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087233 1 + 62195757 C i panPan2.chr20 C 0 T 53 s gorGor5.CYUI01015848v1 473857 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000977 1 - 110113093 C i nomLeu3.chr13 T 54 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=25404.000000 s hg38.chr20_KI270870v1_alt 83733 31 + 183433 CTGTAGTTGTGTCCATTCCCCCTCCCTGGCG s panTro5.chr20 66313213 31 + 66533130 TTGTAGTTGTGTCCATTTCCCCTCCCTGGCT i panTro5.chr20 C 0 T 53 s panPan2.chr20 62087181 31 + 62195757 CTGTAGTTGTGTCCGTTTCCCCTCCCTGGCT i panPan2.chr20 T 53 I 50 s gorGor5.CYUI01015848v1 473858 31 - 578057 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000978 31 - 110113093 CTGTAGTTGTGTCCATTCCCCATCCCTGACT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=19720.000000 s hg38.chr20_KI270870v1_alt 83764 22 + 183433 TCTCCTCCTGCAGCATCTTTCC s panTro5.chr20 66313191 22 + 66533130 TCTCCTCCTGCAGCATCTTTCC i panTro5.chr20 T 53 C 0 s panPan2.chr20 62087262 22 + 62195757 TCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 I 50 C 0 s gorGor5.CYUI01015848v1 473889 22 - 578057 TCTCCTCCTGCATCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001009 22 - 110113093 TCTCCTCCTGTAGCATCTTTCC i nomLeu3.chr13 C 0 T 54 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=15038.000000 s hg38.chr20_KI270870v1_alt 83786 32 + 183433 CTGTAGTTGTGTCCATTCCCCCTCCCTGGCTT s panTro5.chr20 66313213 32 + 66533130 TTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT i panTro5.chr20 C 0 I 3 s panPan2.chr20 62087284 32 + 62195757 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473911 31 - 578057 CTGTAGTTGTGCCCATT-CCCCTCTCTGACTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=2892.000000 s hg38.chr20_KI270870v1_alt 83818 5 + 183433 CTCCT s panTro5.chr20 66313248 5 + 66533130 CTCCT i panTro5.chr20 I 3 C 0 s panPan2.chr20 62087316 5 + 62195757 CTCCT i panPan2.chr20 C 0 T 87 s gorGor5.CYUI01015848v1 473942 5 - 578057 CTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=4367.000000 s hg38.chr20_KI270870v1_alt 83823 16 + 183433 GCAGCATCTTTCCCTG s panTro5.chr20 66313253 16 + 66533130 GCAGCATCCTTCCCTG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 473947 16 - 578057 GCAGCATCTTTCCCTG i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087321 87 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=16812.000000 s hg38.chr20_KI270870v1_alt 83839 32 + 183433 TAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTC s panTro5.chr20 66313269 35 + 66533130 TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTC i panTro5.chr20 C 0 T 209 s panPan2.chr20 62087234 35 + 62195757 TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTC i panPan2.chr20 T 87 C 0 s gorGor5.CYUI01015848v1 473963 35 - 578057 TAGTTGTGTCCATTTCCCCTCCCTGGCGTCTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=25860.000000 s hg38.chr20_KI270870v1_alt 83871 47 + 183433 CTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT s panTro5.chr20 66313095 47 + 66533130 CTGCAGCATCTTTCCCTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTT i panTro5.chr20 T 209 I 3 s panPan2.chr20 62087269 47 + 62195757 CTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT i panPan2.chr20 C 0 T 100 s gorGor5.CYUI01015848v1 473998 47 - 578057 CTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCTCTCCCTGACTT i gorGor5.CYUI01015848v1 C 0 I 3 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=22585.000000 s hg38.chr20_KI270870v1_alt 83918 44 + 183433 CTCCTGTAGCATCTTTCC---TAGTTGTGTCCATTTCCCCTCCCTGG s panTro5.chr20 66313145 44 + 66533130 CTCCTGCAGCATCTTTCC---TAGTTGTGCCCATTTCCCCTCCCTGG i panTro5.chr20 I 3 T 205 s panPan2.chr20 62087216 44 + 62195757 CTCCTGCAGCATCTTTCC---TAGTTGTGCCCATTTCCCCTCCCTGG i panPan2.chr20 T 100 C 0 s gorGor5.CYUI01015848v1 474048 47 - 578057 CTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCTCTCCCTGG i gorGor5.CYUI01015848v1 I 3 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=30441.000000 s hg38.chr20_KI270870v1_alt 83962 58 + 183433 CTTCTCCT---GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT s panTro5.chr20 66312984 61 + 66533130 CTTCTCCTCCTGCAGCATCTTTCCTTGTAGTTGTGTCCATTTTCCCTCCCTGGCTTCTCCT i panTro5.chr20 T 205 I 16 s panPan2.chr20 62087260 61 + 62195757 CTTCTCCTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT i panPan2.chr20 C 0 T 153 s gorGor5.CYUI01015848v1 474095 61 - 578057 CTTCTCCTCCTGCAGCATCTTTCCCTGTAGTTGTGCCCATTCCCCCTCTCTGACTTCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=3176.000000 s hg38.chr20_KI270870v1_alt 84020 12 + 183433 GTAGCATCTTTC s panPan2.chr20 62087168 12 + 62195757 GCAGCATCTTTC i panPan2.chr20 T 153 C 0 s gorGor5.CYUI01015848v1 474156 12 - 578057 GCAGCATCTTTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313045 16 + 66533130 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=2346.000000 s hg38.chr20_KI270870v1_alt 84032 4 + 183433 CCTG s panPan2.chr20 62087180 4 + 62195757 CCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474168 4 - 578057 CCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000977 4 - 110113093 CCTG i nomLeu3.chr13 T 54 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313045 16 + 66533130 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=30015.000000 s hg38.chr20_KI270870v1_alt 84036 35 + 183433 TAGTTGTGTCCATTCCCCCTCCCTGACTTCTCCTC s panTro5.chr20 66313061 35 + 66533130 TAGTTGTGTCCATTTCCCCTCCCTGACTTCTCCTC i panTro5.chr20 I 16 I 102 s panPan2.chr20 62087184 35 + 62195757 TAGTTGTGTCCGTTTCCCCTCCCTGGCTTCTCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474172 35 - 578057 TAGTTGTGTGCATTTCCCCTCCCTGACTTCTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000981 35 - 110113093 TAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=13846.000000 s hg38.chr20_KI270870v1_alt 84071 15 + 183433 CTGCAGCATCTTTCC s panTro5.chr20 66313198 15 + 66533130 CTGCAGCATCTTTCC i panTro5.chr20 I 102 C 0 s panPan2.chr20 62087219 15 + 62195757 CTGCAGCATCTTTCC i panPan2.chr20 C 0 T 103 s gorGor5.CYUI01015848v1 474207 15 - 578057 CTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001016 15 - 110113093 CTGTAGCATCTTTCC i nomLeu3.chr13 C 0 T 53 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=611.000000 s hg38.chr20_KI270870v1_alt 84086 3 + 183433 CTG s panTro5.chr20 66313213 3 + 66533130 TTG i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 110000978 3 - 110113093 CTG i nomLeu3.chr13 T 53 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087234 103 + 62195757 T e gorGor5.CYUI01015848v1 474222 0 - 578057 C e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=39595.000000 s hg38.chr20_KI270870v1_alt 84089 50 + 183433 TAGTTGTGTCCATTTCCCCTCCCTGGCGTCTCCTCCTGCAGCATCTTTCC s panTro5.chr20 66313216 50 + 66533130 TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCCTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087131 50 + 62195757 TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 T 103 C 0 s gorGor5.CYUI01015848v1 474222 49 - 578057 TAGTTGTGTGCCTTT-CCCTCCCTGACTTCTTCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000981 50 - 110113093 TAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTCC i nomLeu3.chr13 C 0 T 50 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=18632.000000 s hg38.chr20_KI270870v1_alt 84139 37 + 183433 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT s panTro5.chr20 66313266 40 + 66533130 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087181 37 + 62195757 CTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTT---CTCCT i panPan2.chr20 C 0 T 203 s gorGor5.CYUI01015848v1 474271 40 - 578057 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCGTCTCCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=7083.000000 s hg38.chr20_KI270870v1_alt 84176 13 + 183433 GTAGCATCTTTCC s panTro5.chr20 66313306 13 + 66533130 GCAGCATCTTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087015 13 + 62195757 GCAGCATCTTTCC i panPan2.chr20 T 203 C 0 s gorGor5.CYUI01015848v1 474311 13 - 578057 GCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 50 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=422.000000 s hg38.chr20_KI270870v1_alt 84189 1 + 183433 T s panTro5.chr20 66313319 1 + 66533130 T i panTro5.chr20 C 0 T 103 s panPan2.chr20 62087028 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474324 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 I 3 s nomLeu3.chr13 110000981 1 - 110113093 T i nomLeu3.chr13 T 50 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=23196.000000 s hg38.chr20_KI270870v1_alt 84190 27 + 183433 AGTTGTGTCCATTTCCCCTCCCTGGCT s panTro5.chr20 66313217 27 + 66533130 AGTTGTGTCCATTTCCCCTCCCTGGCT i panTro5.chr20 T 103 C 0 s panPan2.chr20 62087029 27 + 62195757 AGTTGTGTCCATTTCCCCTCCCTGGCT i panPan2.chr20 C 0 I 103 s gorGor5.CYUI01015848v1 474328 27 - 578057 AGTTGTGTCCATTTCCCCTCCCTGGCA i gorGor5.CYUI01015848v1 I 3 C 0 s nomLeu3.chr13 110000982 27 - 110113093 AGTTGTGTCCATTCCCCATCCCTGACT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=20088.000000 s hg38.chr20_KI270870v1_alt 84217 22 + 183433 TCTCCTCCTGCAGCATCTTTCC s panTro5.chr20 66313244 22 + 66533130 TCTCCTCCTGCAGCATCCTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087159 22 + 62195757 TCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 I 103 C 0 s gorGor5.CYUI01015848v1 474355 22 - 578057 TCTCCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001009 22 - 110113093 TCTCCTCCTGTAGCATCTTTCC i nomLeu3.chr13 C 0 T 54 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=11941.000000 s hg38.chr20_KI270870v1_alt 84239 23 + 183433 CTGTAGTTGTGTCCATTCCCCCT s panTro5.chr20 66313266 23 + 66533130 CTGTAGTTGTGTCCATTTCCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087181 23 + 62195757 CTGTAGTTGTGTCCGTTTCCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474377 23 - 578057 CTGTAGTTGTGCCCATTCCCCCT i gorGor5.CYUI01015848v1 C 0 I 499 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=2607.000000 s hg38.chr20_KI270870v1_alt 84262 8 + 183433 CCCTGGCT--- s panTro5.chr20 66313289 8 + 66533130 CCCTGGCT--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087204 8 + 62195757 CCCTGGCT--- i panPan2.chr20 C 0 T 99 s gorGor5.CYUI01015848v1 474899 11 - 578057 CCCTGGCGTCT i gorGor5.CYUI01015848v1 I 499 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=29.000000 s hg38.chr20_KI270870v1_alt 84270 1 + 183433 T s panTro5.chr20 66313297 1 + 66533130 T i panTro5.chr20 C 0 I 3 s gorGor5.CYUI01015848v1 474910 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087212 99 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=20145.000000 s hg38.chr20_KI270870v1_alt 84271 39 + 183433 CTCCTGTAGCATCTTTCC---TAGTTGTGTCCATTTCCCCTC s panTro5.chr20 66313301 39 + 66533130 CTCCTGCAGCATCTTTCC---TAGTTGTGTCCATTTCCCCTC i panTro5.chr20 I 3 C 0 s panPan2.chr20 62087113 39 + 62195757 CTCCTGCAGCATCTTTCC---TAGTTGTGTCCATTTCCCCTC i panPan2.chr20 T 99 C 0 s gorGor5.CYUI01015848v1 474911 42 - 578057 CTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTCCCCCTC i gorGor5.CYUI01015848v1 C 0 T 553 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=2346.000000 s hg38.chr20_KI270870v1_alt 84310 4 + 183433 CCTG s panTro5.chr20 66313340 4 + 66533130 CCTG i panTro5.chr20 C 0 T 96 s panPan2.chr20 62087152 4 + 62195757 CCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474400 4 - 578057 CCTG i gorGor5.CYUI01015848v1 T 553 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=611.000000 s hg38.chr20_KI270870v1_alt 84314 3 + 183433 GCT s panPan2.chr20 62087156 3 + 62195757 GCT i panPan2.chr20 C 0 I 64 s gorGor5.CYUI01015848v1 474404 3 - 578057 ACT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 96 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=642.000000 s hg38.chr20_KI270870v1_alt 84317 8 + 183433 TCTCCTGT s gorGor5.CYUI01015848v1 474407 8 - 578057 TCTCCTGC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087159 64 + 62195757 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 96 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=8846.000000 s hg38.chr20_KI270870v1_alt 84325 40 + 183433 AGCATCTTTCC---TAGTTGTGTCCATTTCCCCTCCCTGGCTT--- s panPan2.chr20 62087223 40 + 62195757 AGCATCTTTCC---TAGTTGTGCCCATTTCCCCTCCCTGGCTT--- i panPan2.chr20 I 64 C 0 s gorGor5.CYUI01015848v1 474415 46 - 578057 AGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCGTCTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 96 + 66533130 T e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=1746.000000 s hg38.chr20_KI270870v1_alt 84365 3 + 183433 CTC s panTro5.chr20 66313248 3 + 66533130 CTC i panTro5.chr20 T 96 C 0 s panPan2.chr20 62087263 3 + 62195757 CTC i panPan2.chr20 C 0 T 201 s gorGor5.CYUI01015848v1 474461 3 - 578057 CTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=573.000000 s hg38.chr20_KI270870v1_alt 84368 2 + 183433 CT s panTro5.chr20 66313251 2 + 66533130 CT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474464 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087266 201 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=23928.000000 s hg38.chr20_KI270870v1_alt 84370 45 + 183433 GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT s panTro5.chr20 66313253 45 + 66533130 GCAGCATCCTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT i panTro5.chr20 C 0 T 103 s panPan2.chr20 62087065 45 + 62195757 GCAGCATCTTTCCTTGTAGTTGTGTCCATTTTCCCTCCCTGGCTT i panPan2.chr20 T 201 I 156 s gorGor5.CYUI01015848v1 474466 45 - 578057 GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCTCTCCCTGACTT i gorGor5.CYUI01015848v1 C 0 I 3 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=29195.000000 s hg38.chr20_KI270870v1_alt 84415 55 + 183433 CTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT s panTro5.chr20 66313195 58 + 66533130 CTCCTGCAGCATCTTTCCTTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCT i panTro5.chr20 T 103 C 0 s panPan2.chr20 62087266 55 + 62195757 CTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT i panPan2.chr20 I 156 T 153 s gorGor5.CYUI01015848v1 474514 58 - 578057 CTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGACTTCTCCTCCT i gorGor5.CYUI01015848v1 I 3 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=19122.000000 s hg38.chr20_KI270870v1_alt 84470 45 + 183433 GTAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT- s panTro5.chr20 66313253 45 + 66533130 GCAGCATCCTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT- i panTro5.chr20 C 0 T 156 s panPan2.chr20 62087168 45 + 62195757 GCAGCATCTTTCCCTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTT- i panPan2.chr20 T 153 C 0 s gorGor5.CYUI01015848v1 474572 43 - 578057 GCAGCATCTTT-CCTGTAGTTGTGTCCATTTCCTCTCCT--GCTTT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=46951.000000 s hg38.chr20_KI270870v1_alt 84515 102 + 183433 CTCCT---GCAGCATCTTTCC--TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT---GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT s panTro5.chr20 66313142 108 + 66533130 CTCCTCCTGCAGCATCTTTCC--TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCCTTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT i panTro5.chr20 T 156 T 153 s panPan2.chr20 62087213 108 + 62195757 CTCCTCCTGCAGCATCTTTCC--TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT i panPan2.chr20 C 0 T 153 s gorGor5.CYUI01015848v1 474615 101 - 578057 CTCCT---GCA-CATCTTTCCTGTAGTTGTGCCCA-TTCCCCTCTCTGACTTCTCCT---GCAGCATCTTTCCCTGTAGTTGTGCCCA-TTCCCCTCTCTGGCTTCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=6343.000000 s hg38.chr20_KI270870v1_alt 84617 12 + 183433 GTAGCATCTTTC s panTro5.chr20 66313097 12 + 66533130 GCAGCATCTTTC i panTro5.chr20 T 153 C 0 s panPan2.chr20 62087168 12 + 62195757 GCAGCATCTTTC i panPan2.chr20 T 153 C 0 s gorGor5.CYUI01015848v1 474716 12 - 578057 GTAGCATCTTTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=44145.000000 s hg38.chr20_KI270870v1_alt 84629 54 + 183433 CCTGTAGTTGTGTCCATTCCCCCTCCCTGGCGTCTCCTCCTGCAGCATCTTTCC s panTro5.chr20 66313109 54 + 66533130 CCTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087180 54 + 62195757 CCTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474728 51 - 578057 C---TAGTTGTGTCCATTTCCCCTCCCTGGCGTCTCCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110000977 54 - 110113093 CCTGTAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTCC i nomLeu3.chr13 T 54 T 54 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=44699.000000 s hg38.chr20_KI270870v1_alt 84683 87 + 183433 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT---GCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT s panTro5.chr20 66313163 87 + 66533130 ---TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCCTTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT i panTro5.chr20 C 0 T 153 s panPan2.chr20 62087234 87 + 62195757 ---TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTCCCTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCT i panPan2.chr20 C 0 T 37 s gorGor5.CYUI01015848v1 474779 87 - 578057 CTGTAGTTGTGCCCATTCCCCCTCCCTGGCTTCTCCT---GTAGCATCTTTCCCTGTAGTTGTGTCCATTCCCCCTCCCTGGCTTCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=3167.000000 s hg38.chr20_KI270870v1_alt 84770 12 + 183433 GTAGCATCTTTC s panTro5.chr20 66313097 12 + 66533130 GCAGCATCTTTC i panTro5.chr20 T 153 C 0 s gorGor5.CYUI01015848v1 474866 12 - 578057 GTAGCATCTTTC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087321 37 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 54 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=600.000000 s hg38.chr20_KI270870v1_alt 84782 1 + 183433 C s panTro5.chr20 66313109 1 + 66533130 C i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474878 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 I 99 s nomLeu3.chr13 110000977 1 - 110113093 C i nomLeu3.chr13 T 54 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087321 37 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=1746.000000 s hg38.chr20_KI270870v1_alt 84783 3 + 183433 CTG s panTro5.chr20 66313110 3 + 66533130 CTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087284 3 + 62195757 CTG i panPan2.chr20 T 37 C 0 s nomLeu3.chr13 110000978 3 - 110113093 CTG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e gorGor5.CYUI01015848v1 474879 99 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=23018.000000 s hg38.chr20_KI270870v1_alt 84786 28 + 183433 TAGTTGTGTCCATTCCCCCTCCCTGGCG s panTro5.chr20 66313113 28 + 66533130 TAGTTGTGTCCGTTTCCCCTCCCTGGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087287 28 + 62195757 TAGTTGTGTCCATTTCCCCTCCCTGGCT i panPan2.chr20 C 0 T 156 s gorGor5.CYUI01015848v1 474978 28 - 578057 TAGTTGTGTCCATTTCCCCTCCCTGGCG i gorGor5.CYUI01015848v1 I 99 C 0 s nomLeu3.chr13 110000981 28 - 110113093 TAGTTGTGTCCATTCCCCATCCCTGACT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=19576.000000 s hg38.chr20_KI270870v1_alt 84814 21 + 183433 TCTCCTCCTGCAGCATCTTTC s panTro5.chr20 66313141 21 + 66533130 TCTCCTCCTGCAGCATCTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087159 21 + 62195757 TCTCCTCCTGCAGCATCTTTC i panPan2.chr20 T 156 C 0 s gorGor5.CYUI01015848v1 475006 21 - 578057 TCTCCTCCTGCAGCATCTTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001009 21 - 110113093 TCTCCTCCTGTAGCATCTTTC i nomLeu3.chr13 C 0 T 53 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=786.000000 s hg38.chr20_KI270870v1_alt 84835 4 + 183433 CCTG s panTro5.chr20 66313162 1 + 66533130 C--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087180 4 + 62195757 CCTG i panPan2.chr20 C 0 T 53 s gorGor5.CYUI01015848v1 475027 4 - 578057 CCTG i gorGor5.CYUI01015848v1 C 0 T 152 s nomLeu3.chr13 110000977 4 - 110113093 CCTG i nomLeu3.chr13 T 53 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=43230.000000 s hg38.chr20_KI270870v1_alt 84839 49 + 183433 TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTC s panTro5.chr20 66313163 49 + 66533130 TAGTTGTGCCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087131 49 + 62195757 TAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTC i panPan2.chr20 T 53 C 0 s gorGor5.CYUI01015848v1 474879 49 - 578057 TAGTTGTGTCCATTTCCCCTCCCTGGCGTCTCCTCCTGCAGCATCTTTC i gorGor5.CYUI01015848v1 T 152 C 0 s nomLeu3.chr13 110000981 49 - 110113093 TAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTC i nomLeu3.chr13 C 0 T 53 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=42848.000000 s hg38.chr20_KI270870v1_alt 84888 53 + 183433 CCTGTAGTTGTGTCCATTCCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTC s panTro5.chr20 66313212 53 + 66533130 CTTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCCTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087180 53 + 62195757 CCTGTAGTTGTGTCCGTTTCCCCTCCCTGGCTTCTCCTCCTGCAGCATCTTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474928 50 - 578057 CCTGTAGTTGTGTCCATTCCCCCTCCCTGGCTT---CTCCTGTAGCATCTTCC i gorGor5.CYUI01015848v1 C 0 T 299 s nomLeu3.chr13 110000977 53 - 110113093 CCTGTAGTTGTGTCCATTCCCCATCCCTGACTTCTCCTCCTGTAGCATCTTTC i nomLeu3.chr13 T 53 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=1000.000000 s hg38.chr20_KI270870v1_alt 84941 1 + 183433 C s panTro5.chr20 66313265 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087233 1 + 62195757 C i panPan2.chr20 C 0 I 50 s gorGor5.CYUI01015848v1 474679 1 - 578057 C i gorGor5.CYUI01015848v1 T 299 C 0 s nomLeu3.chr13 110001030 1 - 110113093 C i nomLeu3.chr13 C 0 T 12 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=17490.000000 s hg38.chr20_KI270870v1_alt 84942 37 + 183433 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT s panTro5.chr20 66313266 40 + 66533130 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTTCTCCTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087284 37 + 62195757 CTGTAGTTGTGTCCATTTCCCCTCCCTGGCTT---CTCCT i panPan2.chr20 I 50 T 87 s gorGor5.CYUI01015848v1 474680 36 - 578057 CTGTAGTTGTGCCCA-TTCCCCTCTCTGGCTT---CTCCT i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=3476.000000 s hg38.chr20_KI270870v1_alt 84979 13 + 183433 GCAGCATCTTTCC s panTro5.chr20 66313306 13 + 66533130 GCAGCATCTTTCC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 474716 13 - 578057 GTAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 I 249 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087321 87 + 62195757 T e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=0.000000 s hg38.chr20_KI270870v1_alt 84992 3 + 183433 CTG e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panPan2.chr20 62087321 87 + 62195757 T e gorGor5.CYUI01015848v1 474729 249 - 578057 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313319 0 + 66533130 C e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=13986.000000 s hg38.chr20_KI270870v1_alt 84995 25 + 183433 TAGTTGTGTCCATTTCCCCTCCCTG s panTro5.chr20 66313319 25 + 66533130 TAGTTGTGTCCATTTCCCCTCCCTG i panTro5.chr20 C 0 T 78 s panPan2.chr20 62087234 25 + 62195757 TAGTTGTGCCCATTTCCCCTCCCTG i panPan2.chr20 T 87 C 0 s gorGor5.CYUI01015848v1 474978 25 - 578057 TAGTTGTGTCCATTTCCCCTCCCTG i gorGor5.CYUI01015848v1 I 249 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=5231.000000 s hg38.chr20_KI270870v1_alt 85020 22 + 183433 GCTTCTCCT---GCAGCATCTTTCC s panPan2.chr20 62087259 25 + 62195757 GCTTCTCCTCCTGCAGCATCTTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475003 25 - 578057 GCGTCTCCTCCTGCAGCATCTTTCC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313344 78 + 66533130 T e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e otoGar3.GL873542 22822028 219 + 22939663 I e macFas5.chr10 96395184 2 + 96509753 I a score=3820.000000 s hg38.chr20_KI270870v1_alt 85042 4 + 183433 CTGT s panTro5.chr20 66313266 4 + 66533130 CTGT i panTro5.chr20 T 78 C 0 s panPan2.chr20 62087284 4 + 62195757 CTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475028 4 - 578057 CTGT i gorGor5.CYUI01015848v1 C 0 C 0 s otoGar3.GL873542 22822247 4 + 22939663 CTGT i otoGar3.GL873542 I 219 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47584051 891 + 47698779 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e macFas5.chr10 96395184 2 + 96509753 I a score=7209.000000 s hg38.chr20_KI270870v1_alt 85046 11 + 183433 AGTTGTGTCCA s panTro5.chr20 66313270 11 + 66533130 AGTTGTGTCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087288 11 + 62195757 AGTTGTGTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475032 11 - 578057 AGTTGTGTCTG i gorGor5.CYUI01015848v1 C 0 C 0 s otoGar3.GL873542 22822251 10 + 22939663 GG-TATGTCCA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47584942 11 + 47698779 AGCTCCACCCA i canFam3.chr24 I 891 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e cerAty1.NW_012001373v1 3667395 0 - 3785965 C e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e manLeu1.NW_012101652v1 52519 0 - 179258 C e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e macFas5.chr10 96395184 2 + 96509753 I a score=16044.000000 s hg38.chr20_KI270870v1_alt 85057 6 + 183433 TTTCCC s panTro5.chr20 66313281 6 + 66533130 TTTCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087299 6 + 62195757 TTTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475043 6 - 578057 TTTCCC i gorGor5.CYUI01015848v1 C 0 C 0 s cerAty1.NW_012001373v1 3667395 6 - 3785965 TTTCCC i cerAty1.NW_012001373v1 C 0 I 2 s manLeu1.NW_012101652v1 52519 6 - 179258 TTTCCC i manLeu1.NW_012101652v1 C 0 I 2 s otoGar3.GL873542 22822261 6 + 22939663 TTTCCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47584953 6 + 47698779 TTTCCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I e macFas5.chr10 96395184 2 + 96509753 I a score=7764.000000 s hg38.chr20_KI270870v1_alt 85063 4 + 183433 ------CTCC s panTro5.chr20 66313287 4 + 66533130 ------CTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087305 4 + 62195757 ------CTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475049 4 - 578057 ------CTCC i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96395186 4 + 96509753 ------CTCC i macFas5.chr10 I 2 C 0 s cerAty1.NW_012001373v1 3667403 4 - 3785965 ------CTCC i cerAty1.NW_012001373v1 I 2 C 0 s manLeu1.NW_012101652v1 52527 4 - 179258 ------CTGC i manLeu1.NW_012101652v1 I 2 C 0 s otoGar3.GL873542 22822267 4 + 22939663 ------TTCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47584959 10 + 47698779 CGGGTGCCCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181773049 51 + 182113224 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I a score=34968.000000 s hg38.chr20_KI270870v1_alt 85067 16 + 183433 CTG-GCTTCTCCT--CTTC- s panTro5.chr20 66313291 16 + 66533130 CTG-GCTTCTCCT--CCTG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62087309 16 + 62195757 CTG-GCTTCTCCT--CTTC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475053 16 - 578057 CTG-GCTTCTCCT--CTTC- i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96395190 16 + 96509753 CTG-GCTTCTCCT--CCTG- i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3667407 16 - 3785965 CTG-GCTTCTCCT--CCTG- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52531 16 - 179258 CTG-GCTTCTCCT--CCTG- i manLeu1.NW_012101652v1 C 0 C 0 s otoGar3.GL873542 22822271 16 + 22939663 TCA-GCTTTTCCT--CCTG- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181773100 15 + 182113224 CTT-GTTTCTTCC--TCT-- i mm10.chr2 I 51 C 0 s canFam3.chr24 47584969 20 + 47698779 CTGTGCTTCTCCTAGCCTCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e nomLeu3.chr13 110001031 12 - 110113093 T e rheMac8.chr10 92727240 6 - 92844088 I a score=38297.000000 s hg38.chr20_KI270870v1_alt 85083 13 + 183433 TAGCATCTTTCCT s panTro5.chr20 66313307 13 + 66533130 CAGCATCTTTCCT i panTro5.chr20 C 0 I 12354 s panPan2.chr20 62087325 13 + 62195757 TAGCATCTTTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475069 13 - 578057 TAGCATCTTTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001019 13 - 110113093 TAGCATCTTTCCT i nomLeu3.chr13 T 12 C 0 s macFas5.chr10 96395206 13 + 96509753 TAGCATCGTTCCT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3667423 13 - 3785965 TAGCATCGCTCCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52547 13 - 179258 TAGCATCGTTCCT i manLeu1.NW_012101652v1 C 0 C 0 s otoGar3.GL873542 22822287 13 + 22939663 GGGTGTCTTTTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181773115 13 + 182113224 TAGCTTCTTCTTT i mm10.chr2 C 0 I 1 s canFam3.chr24 47584989 13 + 47698779 TGCTATCTCTGCT i canFam3.chr24 C 0 I 2 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e rheMac8.chr10 92727240 6 - 92844088 I a score=8049.000000 s hg38.chr20_KI270870v1_alt 85096 3 + 183433 GCT s panPan2.chr20 62087338 3 + 62195757 GCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475082 3 - 578057 GCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001032 3 - 110113093 GCT i nomLeu3.chr13 C 0 I 2 s macFas5.chr10 96395219 3 + 96509753 GTT i macFas5.chr10 C 0 I 2 s cerAty1.NW_012001373v1 3667436 3 - 3785965 GTT i cerAty1.NW_012001373v1 C 0 I 2 s manLeu1.NW_012101652v1 52560 3 - 179258 GTT i manLeu1.NW_012101652v1 C 0 I 2 s otoGar3.GL873542 22822300 2 + 22939663 -CT i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181773129 3 + 182113224 GCC i mm10.chr2 I 1 I 2 s canFam3.chr24 47585004 3 + 47698779 GCT i canFam3.chr24 I 2 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e saiBol1.JH378156 16259364 0 + 16356641 C e macNem1.NW_012014244v1 16866231 6 - 16982598 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e calJac3.chrUn_GL286459 21971 0 + 372756 C e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313320 12354 + 66533130 I e rheMac8.chr10 92727240 6 - 92844088 I a score=14922.000000 s hg38.chr20_KI270870v1_alt 85099 6 + 183433 -------CCCTGG s panPan2.chr20 62087341 6 + 62195757 -------CCCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475085 5 - 578057 --------CCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001037 6 - 110113093 -------CCTGGG i nomLeu3.chr13 I 2 C 0 s rheMac8.chr10 92727246 5 - 92844088 --------CCTGG i rheMac8.chr10 I 6 I 1 s macFas5.chr10 96395224 5 + 96509753 --------CCTGG i macFas5.chr10 I 2 I 1 s macNem1.NW_012014244v1 16866237 5 - 16982598 --------CCTGG i macNem1.NW_012014244v1 I 6 I 1 s cerAty1.NW_012001373v1 3667441 5 - 3785965 --------CCTGG i cerAty1.NW_012001373v1 I 2 I 1 s manLeu1.NW_012101652v1 52565 5 - 179258 --------CCTGG i manLeu1.NW_012101652v1 I 2 I 1 s calJac3.chrUn_GL286459 21971 5 + 372756 --------CCTGG i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16259364 5 + 16356641 --------CCTGG i saiBol1.JH378156 C 0 I 1 s otoGar3.GL873542 22822304 6 + 22939663 -------CCCTGT i otoGar3.GL873542 I 2 I 1 s mm10.chr2 181773134 6 + 182113224 -------CCCTAA i mm10.chr2 I 2 I 1 s canFam3.chr24 47585007 13 + 47698779 CAGTCGTTCCTGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e colAng1.NW_012114444v1 5538392 12 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313320 12354 + 66533130 I a score=16870.000000 s hg38.chr20_KI270870v1_alt 85105 4 + 183433 TAGC s panPan2.chr20 62087347 4 + 62195757 TAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475090 4 - 578057 TAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001043 4 - 110113093 TAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727252 4 - 92844088 TGGG i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96395230 4 + 96509753 TGGG i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16866243 4 - 16982598 TGGG i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3667447 4 - 3785965 TGGG i cerAty1.NW_012001373v1 I 1 C 0 s manLeu1.NW_012101652v1 52571 4 - 179258 TGGG i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5538404 4 - 5823884 TGGG i colAng1.NW_012114444v1 I 12 C 0 s calJac3.chrUn_GL286459 21977 4 + 372756 TGGG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16259370 4 + 16356641 TAGG i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22822311 4 + 22939663 TGGG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181773141 3 + 182113224 TGG- i mm10.chr2 I 1 C 0 s canFam3.chr24 47585020 4 + 47698779 TGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e cebCap1.NW_016107870v1 1128488 14 + 1231380 I e aotNan1.NW_018500483v1 2656934 14 + 11732439 I e panTro5.chr20 66313320 12354 + 66533130 I a score=1360075.000000 s hg38.chr20_KI270870v1_alt 85109 186 + 183433 ------CTCTTGGGAGCCACCT----ATTTCTGGAGGTCC----CCACTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----GAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGCA-----TTGAACCC---CACTTGG---------AGCTGAGGATGTTCTCGCCCCAGAAGGAAAAGCT-GTGTGTGTCTGCGTGGAGC----AGTGTGGA--GTGGTTTCCTTGGTGCCGCCTG s panPan2.chr20 62087351 186 + 62195757 ------CTCTTGGGAGCCACCT----ATTTCTGGAGGTCC----CCACTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----GAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGCA-----TTGAACCC---CACTTGG---------AGCTGAGGATGTTCTCGCCCCAGAAGGAAAAGCT-GTGTGTGTCTGCGTGGAGC----AGTGTGGA--GTGGTTTCCTTGGTGCCGCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475094 186 - 578057 ------CTCTTGGGAGCCACCT----ATTTCTGGAGGTCC----CCACTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----GAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGCA-----CTGAACCC---CACTTGG---------AGCTGAGGATGTTCTCGCCCCAGAAGGAAAAGCT-GTGTGTGTCTGCGTGGAGC----AGTGTGGA--GTGGTTTCCTTGGTGCCGCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001047 185 - 110113093 ------CTCTTGGGAGCCACCT----ATTTCTGGAGGTCC----CCACTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----GAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGCA-----TTGAACCC---CACTTGG---------AGCTGAGGATGTTGTCGCCCCAGAAGGAGAATCC--TGTGTGTCTGCGTGGAGC----AGTGTGGA--GTGGTTTCCTTGGTGCCGCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727256 187 - 92844088 ------CTCTTGCGAGCCACCT----ATTTCTGGAGGTCC----CCCCTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----GAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGGG-----TTGAACCC---CACTTGG---------AGCTGAGGATGTTCTTGCCCCAGAAGGAAAATCCTGCGTGTGTCTGCATGGAGC----AGCGTGGA--GTGGTTTGCTTGGTGCCGCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395234 187 + 96509753 ------CTCTTGCGAGCCACCT----ATTTCTGGAGGTCC----CCCCTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----GAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGGG-----TTGAACCC---CACTTGG---------AGCTGAGGATGTTCTTGCCCCAGAAGGAAAATCCTGCGTGTGTCTGCATGGAGC----AGCGTGGA--GTGGTTTGCTTGGTGCCGCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866247 187 - 16982598 ------CTCTTGCGAGCCACCT----ATTTCTGGAGGTCC----CCCCTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----GAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGGG-----TTGAACCC---CACTTGG---------AGCTGAGGATGTTCTTGCCCCAGAAGGAAAATCCTGCGTGTGTCTGCATGGAGC----AGCGTGGA--GTGGTTTGCTTGGTGCCGCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667451 187 - 3785965 ------CTCTTGGGAGCCACCT----ATTTCTGGAGGTCC----CCCCTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----AAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGGG-----TTGAACCC---CACTTGG---------AGCTGAGGATGTTCTTGCCCCAGAAGGAAAATCCTGCGTGTGTCTGCCTGGAGC----AGCGTGGC--GTGGTTTGCTTGGTGCCGCCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52575 190 - 179258 ------CTCTTGGGAGCCACCT----ATTTCTGGAGGTCC----CCCCTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----AAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGGG-----TTGAACCCAATCACTTGG---------AGCTGAGGATGTTCTTGCCCCAGAAGGAAAATCCTGCGTGTGTCTGCATGGAGC----AGCGTGGC--GTGGTTTGCTTGGTGCCGCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538408 187 - 5823884 ------CTCTTGGGAGCCACCT----ATTTCTGGAGGTCC----CCCCTCTGGG---------------------TTCCTTGTCCTGGGTGTG-------------------GGGC----GAATGTGGT----------------------------------------------------GG--ACTGGGGTCACAGGG-----TTGAACCC---CACTTGG---------AGCTGAGGGTGTTCTTGCCCCAGAAGGAAAACCCTGCGTATGTCTGCATGGAGC----AGTGTGGA--GTGGTTTGCTTGGTGCCGCCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 21981 186 + 372756 ------CTCTTGGGAGCCACCT----ATTTCTAGAGTTCT----CCTTTCCGGG---------------------CTCCTTGTCCTGGATGTG-------------------GGGT----GAATGTGCC----------------------------------------------------GG--ACTGGGGTCACAGGG-----TTGCACC----CACCTGG---------AGCTGAGGCTGTTCTTGCCCCAGAAGGAAAATCC--CACCTGTCTGCGTGGAGC--AGAGTGTGGA--TTGGTTTGCTTGCTGCCGCCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259374 185 + 16356641 ------CTCTTGGGAGCCACCT----ATTTCTAGAGTCCT----CCCTTCTAGG---------------------CTTCTTGTCCTGGGTGTG-------------------GGGT----GAATGTGCT----------------------------------------------------GG--ACTGGGGTCACAGGG-----TTGCACC----CACCTGG---------AGCTGAGGCTGTTCTCGTCCCAGAAGGAAAATCC--CGCCTGTCTTCGTGGAGC--AGAGTGTGGA--GTGGTTTGCTTGGTGCCACC-A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128502 186 + 1231380 ------CTCTTGGGAGTCACCT----ATTTCTAGAGTCCT----CCCTTCTGGG---------------------CTCCTTGTCCTGGGTGTG-------------------GGGT----GAACGTGCT----------------------------------------------------GG--ACTGGGGTCACAGGG-----TTGTACC----CACCTGG---------AGCTGAGGCTGTTCTCGCCCCAGAAGGAAAATCC--CGCCTGTCTACGTGGAGC--AGAGTGTGGA--GTGGTTTTCCTGGTACCGCCTG i cebCap1.NW_016107870v1 I 14 C 0 s aotNan1.NW_018500483v1 2656948 188 + 11732439 ------CTCTTGGGAGCCACCT----ATTTCTAGAGTCCT----CCCTTCCGGG---------------------CTCCTTGTCCTGGGTGTG-------------------GGGT----GAATGTGCT----------------------------------------------------GG--ACTGGGGTCTCAGGG-----TTGCACC----CACCTGC---------AGCTGAGGCTGTCCTCGCCCCAGAAGGAAAATCC--CGCCCGTCTGCGTGGAGC--AGAGTGTGGAGTGTGGTCTGCTTGGTGCCGCCTG i aotNan1.NW_018500483v1 I 14 C 0 s otoGar3.GL873542 22822315 247 + 22939663 ------CTTTTGGAAACTGCCT----TTTTCCAGAGTCAT----ACCCTCTAGG---------------------CTCCTTGTCCTGGGGGTG-------------------GAGCAGGAGAGTGTGCCAACTTCTGAGCCCCCAGAGCACCCTGTGGACTTGCTAGCTGTATGGAGGGCAGG--ACCAGGGTGGCAGTG-----CTAGACTC---CACTTGG---------GGCTGCAGATGCTGACATCTTATGGGGGAAATCCTGTCTGTGTCTGTGTGAGGCAAAGAGAGCCAG--GAGGTGTGCTGCGTGCCGCCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181773144 172 + 182113224 ------TTTTTGGGAGTCACTT----CTTTCTGGAAT----------CTCTACC---------------------TTCACTCTTCTGA--GTG-------------------GGAT----TTTCATGGT----------------------------------------------------GACTGCTGAGGCTCCAAGAGCATCTTGAGTTC---TATCCAGCCCAGTGCAGGCCAGGGATG----------AGTGTAGAGCTCC-ACTTGTGACTGAATGGGTC----AG-----A--GTGGTCCTACTAGTG------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47585024 211 + 47698779 CTGTCCTCCTGGGGGGGCACCTGCAGGCCCCTGGAAGCCCTTGGCTCCTCTGGGGACAGAGCCTGTGAGCCCAGCCTCTGGGGCCTGGGTTTGTTGTCCGTCTCGCCAGCCCGGAC----GGAGGCGG-----------------------------------------------------GG--GCTGAGGTCCCTG-------TTGAACCC---CACTTGG---------GGCGGAAG----------CTTCGTGATAGGATCCTGTGAGCACCCGCGTGCCGC----A------A----------CCCGGTGCCTC--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56840734 1805 + 57149010 I e dasNov3.JH569290 221254 1888 - 397369 I e panTro5.chr20 66313320 12354 + 66533130 I a score=222145.000000 s hg38.chr20_KI270870v1_alt 85295 30 + 183433 GGTTCCGGGCACCCGGCCTGGGTGTGAGG--C s panPan2.chr20 62087537 30 + 62195757 GGTTCCGGGCATCCGGCCTGGGTGTGAGG--C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475280 30 - 578057 GGTTCCGGGCACCTGGCCTGGGTGTGAGG--C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001232 30 - 110113093 GGTTCCGGGCACCCGGCCTGGGTGTGAGG--C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727443 30 - 92844088 GGTTCCGGGCACCCGGCCTGGGTGTGAGG--C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395421 30 + 96509753 GGTTCCGGGCACCCGGCCTGGGTGTGAGG--C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866434 30 - 16982598 GGTTCCGGGCACCCGGCCTGGGTGTGAGG--C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667638 30 - 3785965 GGTTCCGGGCACCCGGCCTGGGTGTGAGG--C i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52765 30 - 179258 GGTTCCGGGCACCCGGCCTGGGTGTGAGG--C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538595 30 - 5823884 GGTTCCGGGCACCCGGCCTGGGTGTGAGG--C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22167 28 + 372756 GGTCCT-GGTGCCCGGCCTGAGGGTGATG--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259559 28 + 16356641 GGTTCT-GGTGCCTGGCCTGGGGGTGAGG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128688 29 + 1231380 GGTTCC-GGTGCCCGGCCTGGGGGTGAGGC-- i cebCap1.NW_016107870v1 C 0 I 18 s aotNan1.NW_018500483v1 2657136 29 + 11732439 GGTTCT-GGCGCCCGGCCTGGGGGTGAGG-C- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56842539 30 + 57149010 GGTTCTGGGCGCCTGGCCTGGGCATGAGG--C i micMur3.chr18 I 1805 C 0 s otoGar3.GL873542 22822562 29 + 22939663 -GTCCTGGATTCTTGTCCTGGGCATGAGA--C i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181773316 26 + 182113224 ---TCTAGGCACTTTA-TTGGGGCTGAGA--C i mm10.chr2 C 0 C 0 s canFam3.chr24 47585235 23 + 47698779 -GTTCCTGGCTCCCG-CCTGGGTGC------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 221254 1888 - 397369 I e panTro5.chr20 66313320 12354 + 66533130 I a score=136477.000000 s hg38.chr20_KI270870v1_alt 85325 20 + 183433 CTGGTCACATGGCTGAACTG s panPan2.chr20 62087567 20 + 62195757 CTGGTCACACGGCTGAACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475310 20 - 578057 CTGGTCACATGGCTGAACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001262 20 - 110113093 CTGGTCACACAGCTGAACTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727473 20 - 92844088 CTGGTCACACGGCTGAACGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395451 20 + 96509753 CTGGTCACACGGCTGAACGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866464 20 - 16982598 CTGGTCACACGGCTGAACGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667668 20 - 3785965 CTGGCCACACGGCTGAACGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52795 20 - 179258 CTGGCCACACGGCTGAACGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538625 20 - 5823884 CTGGTCACATGGCTGAACAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22195 17 + 372756 CTGGTCCCACAACTGGA--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259587 19 + 16356641 CTGGTCCCACAACTGGACT- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2657165 18 + 11732439 -TGGTCCCACAACTGGACT- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56842569 20 + 57149010 TTGGTCACACGGCCGGGCTG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22822591 20 + 22939663 CTGGTCACACGGTTGGGCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181773342 20 + 182113224 CTGGCCACATGGCAGTGCCA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e canFam3.chr24 47585258 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 221254 1888 - 397369 I e cebCap1.NW_016107870v1 1128717 18 + 1231380 I e panTro5.chr20 66313320 12354 + 66533130 I a score=417502.000000 s hg38.chr20_KI270870v1_alt 85345 61 + 183433 CTCTCCCAGGCACCCC-GGGAGGGA-TGAATGTGACACTATTGGTGTCCCTCCCAGCACACT--G s panPan2.chr20 62087587 61 + 62195757 CTCTCCCAGGCACCCC-GGGAGGGA-TGAATGTGACACTATTGGTGTCCCTCCCAGCACACT--G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475330 62 - 578057 CTCTCCCAGGCACCCCTGGGAGGGA-TGAATGTGACACTATTGGTGTCCCTCCCAGCACACT--G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001282 61 - 110113093 CTCTCCCAGGCACCCC-TGGAGGGA-TGAATGTGACACTATTGGTGTCCCTCCCAGCACACT--G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727493 62 - 92844088 CTCTCCCAGGAACCCCTGGGAGGGA-TGGATGTGACACTGTTGGTGTCCCTCCCAGCACACT--G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395471 62 + 96509753 CTCTCCCAGGCACCCCTGGGAGGGA-TGGATGTGACACTGTTGGTGTCCCTCCCAGCACACT--G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866484 62 - 16982598 CTCTCCCAGGCACCCCTGGGAGGGA-TGGATGTGACACTGTTGGTGTCCCTCCCAGCACACT--G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667688 62 - 3785965 CTCTCCCAGGCAGCCCTGGGAGGGA-TGGATGTGACACTGTTGGTGTCCCTCCCAGCACACT--G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52815 62 - 179258 CTCTCCCAGGCAGCCCTGGGAGGGA-TGGATGTGACACTGTTGGTGCCCCTCCCAGCACACT--G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538645 61 - 5823884 CTCTCCCAGGCACCCC-GGGAGGGA-TGGATGTGACACTGTTGGTGTCCCTCCCAGCGCACC--G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22212 60 + 372756 CTCTCCCAGGCGCCCC-GGGATGGA-TCAGTGTGACACTTTCGGCATCCCT-CCGGCACACT--G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259606 59 + 16356641 CTCTCCCAGGTG-CCC-GGGATGGA-TGAGTGTGACACTTTCGGCGTCCCT-CTGGCACACT--G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128735 48 + 1231380 CTCTCCCAGGCGCCCC-GGGATGGA-TGAGGGTGGCACTTTCGGTGT-------------CT--G i cebCap1.NW_016107870v1 I 18 C 0 s aotNan1.NW_018500483v1 2657183 60 + 11732439 CTCTCCCAGGCGCCCC-AGGATGGA-TGCGTGTGACACTTTCGGCCTCCCT-CTGGCACATT--G i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56842589 61 + 57149010 CTCTCTCAGGGACCCT-GGGGTAGAGGCAGTGTGACATTATCTGTGTCCCTCCTGGGACACT--- i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22822611 59 + 22939663 --CTCTGGGTGACCCT-GGGATAGAGTCAGTGTGACATTATCTGTGTCCCTTCTGGGACACT--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181773362 55 + 182113224 CTATCACAGCCACTGCTGGGTAGAA-GCAGTGTGACACTG-------ACTACTGGGGACACT--G i mm10.chr2 C 0 C 0 s canFam3.chr24 47585258 30 + 47698779 -----------------------------------CACCTATTGTGCCTCTCCCGGGACACCCGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 221254 1888 - 397369 I e panTro5.chr20 66313320 12354 + 66533130 I a score=45894.000000 s hg38.chr20_KI270870v1_alt 85406 6 + 183433 CCTGCC s panPan2.chr20 62087648 6 + 62195757 CCTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475392 6 - 578057 CCTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001343 6 - 110113093 CTTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727555 6 - 92844088 CCTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395533 6 + 96509753 CCTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866546 6 - 16982598 CCTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667750 6 - 3785965 CCTGCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52877 6 - 179258 CCTGCC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 22272 6 + 372756 CCTGCC i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2657243 6 + 11732439 TCTGCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56842650 5 + 57149010 -CTGCC i micMur3.chr18 C 0 I 2 s otoGar3.GL873542 22822670 5 + 22939663 -CTGCC i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181773417 4 + 182113224 -CTGC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47585288 6 + 47698779 CCCCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223142 6 - 397369 CCGGCC i dasNov3.JH569290 I 1888 C 0 e proCoq1.NW_012150197v1 1835430 556 - 2029793 I e colAng1.NW_012114444v1 5538706 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e saiBol1.JH378156 16259665 0 + 16356641 C e cebCap1.NW_016107870v1 1128783 0 + 1231380 C e panTro5.chr20 66313320 12354 + 66533130 I a score=479346.000000 s hg38.chr20_KI270870v1_alt 85412 54 + 183433 CTGGGCTGGGCA------------CACTCCTC-------------CCCTGTTGGCAGCCGGGGATGACAGGCCGCCTGG s panPan2.chr20 62087654 54 + 62195757 CTGGGCTGGGCA------------CACTCCTC-------------CCCTGTTGGCAGCCGGGGATGACAGGCCGCCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475398 54 - 578057 CTGGGCTGGGCA------------CACTCCTC-------------CCCTGTTGGCAGCCGGGGATGACAGGCTGCCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001349 53 - 110113093 CTGGGCTGGGCA------------CACTCCTC-------------CCCTGTTGGCAGCC-GGGATGACAGGCCGCCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727561 54 - 92844088 CCGGGCTGGGCA------------CACTCCTC-------------CCCTGTTGGCAGCCGGGGATGACAGGCCGCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395539 54 + 96509753 CCGGGCTGGGCA------------CACTCCTC-------------CCCTGTTGGCAGCCGGGGATGACAGGCCGCCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866552 54 - 16982598 CCGGGCTGGGCA------------CACTCCTC-------------CCCTGTTGGCAGCCGGGGATGACAGGCCGCCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667756 54 - 3785965 CCGGGCTGGGCA------------CACTCCTC-------------CCCTGCTGGCAGCCGGGGATGACAGGCCGCCTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52883 54 - 179258 CCGGGCTGGGCA------------CACTCCTC-------------CCCTGTTGGCAGCCGGGGATGACAGGCCGCCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538706 38 - 5823884 ----------------------------CCTC-------------CCCTGTTGGCAGCCGGGGATGACAGGCCGCCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22278 52 + 372756 CTGGGCTGGGCA------------CA--CCCT-------------CCCCGTCGGCAGCTAGGGATGACAGGCTGCCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259665 33 + 16356641 ----------------------------------------------CCCACCGGCAGCCAGGGACGACAGGCTGCCTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128783 33 + 1231380 ----------------------------------------------CCTGCCGGCAACCAGGGATGACAGGCTGCCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657249 52 + 11732439 CTGGGCTGGGCA------------CA--CCCT-------------CCCCGTCGGCGGCCAGGGACGACAGGCTGCCTGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56842657 53 + 57149010 CTGGGCTGGGCG------------CCCTCCT--------------CCCTGTTGGCAGCCTCGGATGACAGGCTGCCTGG i micMur3.chr18 I 2 I 1 s proCoq1.NW_012150197v1 1835986 54 - 2029793 CTGGGCGGGGCA------------CCCTCCTC-------------CCCTGTTGGCAGCCCTGGGTGACAGGCTGCCTGG i proCoq1.NW_012150197v1 I 556 I 1 s otoGar3.GL873542 22822678 64 + 22939663 -GGGGCTGGGCACCCACGGCCACTCCCTCCT--------------TCCAGTTGGCAGGCTTGGATGACAGGCTGGCTGG i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181773421 51 + 182113224 CTGAGTTGGACA---------------TCCTT-------------CTCTGTTGGCAGCCTCCAATGACAGGCCGCCTGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47585294 49 + 47698779 CGGGGCTGAGAT----------------CCTT-------------GCCTCCTGGCAGGC-TCACTGACAGGCCGCCCGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223148 63 - 397369 TGGGGCTGACAC------------CCCTCCCCGTTTTCCTGAGAGCCTCCCTGCCGGCCCG---TGACAGG-TGCCTGG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e panTro5.chr20 66313320 12354 + 66533130 I a score=204701.000000 s hg38.chr20_KI270870v1_alt 85466 24 + 183433 AGAGCCCGTCCTGTGATTTGGTTT s panPan2.chr20 62087708 24 + 62195757 AGAGCCCGTCCTGTGATTTGGTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475452 24 - 578057 AGAGCCCGTCCTGTGATTTGGTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001402 24 - 110113093 AGAGCCCGTCCTGTGATTTGGTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727615 23 - 92844088 AGAGCCCGTCCTGTGATTTGG-TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395593 23 + 96509753 AGAGCCCGTCCTGTGATTTGG-TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866606 23 - 16982598 AGAGCCCGTCCTGTGATTTGG-TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667810 23 - 3785965 AGAGCCCGTCCTGTGATTTGG-TT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52937 23 - 179258 AGAGCCCGTCCTGTGATTTGG-TT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538744 23 - 5823884 AGAGCCGGTCCTGTGATTTGG-TT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22330 23 + 372756 AGAGCC-ATCCTATGATTTGGTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259698 23 + 16356641 AGAGCC-ATCCTGTGATTTGGTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128816 23 + 1231380 AGAGCC-ATCCTGTGATTTGGTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657301 23 + 11732439 AGAGCC-ATCCTATGATTTGGTTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22822742 1 + 22939663 -----------------------T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181773472 24 + 182113224 AGAGCCAGTCCTGTGATTTGGTTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47585343 23 + 47698779 AGAGCC-GTCCTGTGATTTGGCTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223211 22 - 397369 AGAGC--GTCCTGTGATTTGGTTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1836040 1 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56842710 1 + 57149010 I e panTro5.chr20 66313320 12354 + 66533130 I a score=472085.000000 s hg38.chr20_KI270870v1_alt 85490 31 + 183433 GGAAAGTCATTATTACTGCAGAGCAGTTTAG s panPan2.chr20 62087732 31 + 62195757 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475476 31 - 578057 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001426 31 - 110113093 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727638 31 - 92844088 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395616 31 + 96509753 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866629 31 - 16982598 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667833 31 - 3785965 GGAAAGTCATTATTACTGCAGGGCAGTTTAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52960 31 - 179258 GGAAAGTCATTATTACTGCAGGGCAGTTTAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538767 31 - 5823884 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22353 31 + 372756 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259721 31 + 16356641 GGAAAGTCATTATTACTGCAGAGCAGTTTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128839 31 + 1231380 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657324 31 + 11732439 GGAAAGTCATTATTACTGCAGAGCAGTTTAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56842711 30 + 57149010 GGAAAGTCATTATTACTG-CACGCAGTTTAG i micMur3.chr18 I 1 C 0 s proCoq1.NW_012150197v1 1836041 31 - 2029793 GGAAAGTCATTGTTGCTGCCGCGCAGTTTCG i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22822743 30 + 22939663 GGAAAGTCATTATTACTG-GGAGCAGTTTAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181773496 31 + 182113224 GAAAAGTCATTATTACTGCGGAGCACTTTAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47585366 31 + 47698779 GGAAAGTCATTATTACCGCCGAGCAGTTTAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223233 29 - 397369 GGAAAGTCGTTATTACGGC--AGCAGTTTAG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e panTro5.chr20 66313320 12354 + 66533130 I a score=8200033.000000 s hg38.chr20_KI270870v1_alt 85521 443 + 183433 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGCCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCC s panTro5.chr20 66325674 443 + 66533130 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGCCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCC i panTro5.chr20 I 12354 C 0 s panPan2.chr20 62087763 443 + 62195757 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGCCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475507 443 - 578057 CTGTTGTTTTTACAGCTTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGCCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001457 443 - 110113093 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATGATAATATAAGAAAGACTCAGCCACAGTAACTGCCTGCAACACGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92727669 443 - 92844088 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGTCACAGTAACTGGCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTGTGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAACTGCCAGCT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTCACTTCTCTCTGGATTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96395647 443 + 96509753 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGTCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTGTGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAACTGCCAGCT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTCACTTCTCTCTGGATTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16866660 443 - 16982598 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGTCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTGTGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAACTGCCAGCT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTCACTTCTCTCTGGATTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3667864 443 - 3785965 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGTCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTGTGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAACTGCCAGCT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTCACTTCTCTCTGGATTCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 52991 443 - 179258 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGTCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTGTGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAACTGCCAGCT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTCACTTCTCTCTGGATTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5538798 443 - 5823884 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGTCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCGAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACT--CCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22384 444 + 372756 CTGTTGTTTTTACAGC-TTGGTAAAGTTAAAAGA---AATAATAATAATAATATAAGAAAGACTCAGCCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACAGTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTAGCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACTCCCCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16259752 444 + 16356641 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGCCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGA-GCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACTCCCCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCCCCACTCAGCAAGTCTTCATTTCACTTCTCTCTGGATTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1128870 445 + 1231380 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGGAAGACTCAGCCACAGGCACTGCCTGTAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTCAGACAGCCTGGGTGAAAGGTCATTATTTGCATATAAATGGAAAAGAAAGTGTGTGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGT-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACTCCCCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657355 445 + 11732439 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGCCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGAGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTGTAGAATTGCCAACTCCCCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAGAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56842741 441 + 57149010 CTGTTGTTTTTACAGCGTTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGCCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAAGGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-AAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACTCCCCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGT----CTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCC i micMur3.chr18 C 0 I 12 s proCoq1.NW_012150197v1 1836072 440 - 2029793 CTGTTGTTTTTACAGCGCTGGTGAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGCCGCAGTGACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGGCGGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGGAAGGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAAGGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-AAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAGCT-CCCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCCGGT----CTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCCGGATTCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22822773 444 + 22939663 CTGTTGTTTTCACAGCGTTGGTGAGGTTAAAAGA---AATAATGATAATAATATAAAAAAGCCTCAGCCATAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGGCAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGATGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAAGGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACT-CCCCTGCCCCCGCCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCTGGTCTGCCTTTGCGCCACTCAGCAAGTCTTCATTTTACTTCTCTCTGGATTCT i otoGar3.GL873542 C 0 I 11 s mm10.chr2 181773527 437 + 182113224 CTGTTGTTTTTGCAGCATTGGTAAGGTTAAAAGA---AATAATGATAATAATATAAGAAAGACTCAGTCATAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACATTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGAAAAAGAAAGTGTGTGATGTTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAGGGGACATGGCTTGCATTTGGCTTTTATTGAATAGAGAAAGTACTAGCAGAGGCTGATTTAGAAGCAAAATAAT--GAGAAATGTGCAAAGCTATAGAATTCCCGACT-CCCCTACCCCCACCTCCCTTCTCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCAGGTCCGTC--TGCTCCACTCAGCAAGTATT-------CTACTCTTTGGATTTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47585397 443 + 47698779 CTGTTGTTTTTACAGTGTTGGTAAGGTTAAAAGA---AATAATAATAATAATATAAGAAAGACTCAGCCACAGTTACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGCCTGGGTGAAAGGTCACTATTTGCATATAAATGGAAAAGAAAGTGTATGAAGCTGGAAGTTACATCTGTATTATTTTCTCAGCAGTGAGCTGCTGTTGGAGAGATTAAGGGACATGGCTTGGATTTGGCTTTTATAGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCCAACC-CCCCTGCCCCCACCTC---TCCCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCAGGTCTG-CTTTGCTCCACTCAGCAAGTCTCCATTTTAGTTCTCTTTGAATTCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223262 443 - 397369 CTGTTGTTTTTACAGTGCTCGTAAGGTTAAAAGaaataataataataataatataaaaaaGACTCAGCCACAGTAACTGCCTGCAACATGCTATTTGCATTTTTAAGGAAACACTTCTTTGAGACAGGCTGGGTGAAAGGTCACTATTTGCATATAAATGG-AAGGAAAGTGGGTGATG-GGGAAGTTACATCTGTATCATTTTCTCAGCAGCGAGCTGCTGTCGTAGAGATTAAGGGACATG--CTGCATTTGGCTTTTATTGAATAGAGAAAGTACCAGC-GAGGCTGATTTAGAAGCAAAATAATGAGAGAAATGTGCAAAGCTATAGAATTGCTGGCT-CCCCTCCCCCCACCTC---TCTCTTCTCTCATTTTCACCTAAACTCAGCAAAAGCAGGTCTGTCTTTACTCCACTCAGCAAGTCTTCATTTTACTTTTCTGTGAATTCC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=82117.000000 s hg38.chr20_KI270870v1_alt 85964 24 + 183433 AGAGAGG----------------AAAAAAAAAAAGGAAAG s panTro5.chr20 66326117 22 + 66533130 AGAGA------------------AAAAAAAAAAAGGAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62088206 21 + 62195757 AGAG-------------------AGAAAAAAAAAGGAAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475950 22 - 578057 AGAGA------------------GAAAAAAAAAAGGAAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001900 25 - 110113093 AGAGAGA---------------CAAAAAAAAAAAGGAAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728112 21 - 92844088 AGAGATT-------------------AAAAAAAAGGAAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396090 21 + 96509753 AGAGATT-------------------AAAAAAAAGGAAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867103 21 - 16982598 AGAGATT-------------------AAAAAAAAGGAAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668307 22 - 3785965 AGAGATT------------------AAAAAAAAAGGAAAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53434 22 - 179258 AGAGATT------------------AAAAAAAAAGGAAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539241 26 - 5823884 AGAGATTa--------------aaaaaaaaaaaaggaaag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22828 20 + 372756 AGAGA--------------------GGAAAAAAGGGAAAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260196 20 + 16356641 AGAGA--------------------GAAAAAACGGGAAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129315 20 + 1231380 AGAGA--------------------GAAAAAAAGGGAAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657800 20 + 11732439 AGAGA--------------------GAAAAAAAGAGAAAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1836512 19 - 2029793 -------A--------------GCTTaaaaaaaaaaaaag i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22823228 19 + 22939663 -------a--------------aagaaaaaaagaaaaagg i otoGar3.GL873542 I 11 I 5 s mm10.chr2 181773964 21 + 182113224 -------AG------------CTTTATTAAACCAGGAAAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47585840 32 + 47698779 --------AGCTaaacaaaaaaaaaaaaaaaaaaagaaag i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223705 25 - 397369 ---------------AGTTTAAAGAGAGAGACAGAGAGAG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843182 12 + 57149010 I a score=788087.000000 s hg38.chr20_KI270870v1_alt 85988 52 + 183433 AAAAAGAGCAAAACTTGCCCTCATTTTCCCCT-CGGTCCCATTTGTGTTTCCT s panTro5.chr20 66326139 52 + 66533130 AAAAAGAGCAAAACTTGCCCTCATTTTCCCCT-CGGTCCCATTTGTGTTTCCT i panTro5.chr20 C 0 I 535 s panPan2.chr20 62088227 52 + 62195757 AAAAAGAGCAAAACTTGCCCTCATTTTCCCCT-CGGTCCCATTTGTGTTTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 475972 52 - 578057 AAAAAGAGCAAAACTTGCCCTCATTTTCCCCT-CGGTCCCATTTGTGTTTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001925 52 - 110113093 AAAAAGAGCAAAACTTGCCCTCATTTTCCCCT-CGGTCCCATTTGTGTTTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728133 52 - 92844088 AAAAAGAGCAAAACTTGCCCTCATTTCCCCCT-TGGTCCCATTTGTGTTTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396111 52 + 96509753 AAAAAGAGCAAAACTTGCCCTCATTTCCCCCT-TGGTCCCATTTGTGTTTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867124 52 - 16982598 AAAAAGAGCAAAACTTGCCCTCATTTCCCCCT-TGGTCCCATTTGTGTTTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668329 52 - 3785965 AAAAAGAGCAAAACTTGCCCTCATTTCCCCCT-TGGTCCCATTTGTGTTTCCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53456 52 - 179258 AAAAAGAGCAAAACTTGCCCTCATTTCCCCCT-TGGTCCCATTTGTGTTTCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539267 52 - 5823884 aaaaagagcaaaaCGTGCCCTCATTTCCCCCT-TGGTCCCATTTGTGTTTCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22848 52 + 372756 AAAAAGAGCAAAACTTGCCCTCATTTTCCCCT-CAGTCCCATGTGTGTCTCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260216 52 + 16356641 AAAAAGAGCAAAACTTGCCCTCATTTTCCCCT-CAGTCCCATGTGTGTTTCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129335 52 + 1231380 AAAAAGAGCAAAACTTGCCCTCATTTTCCCCT-CAGTCCTGTGTGTGTTTCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657820 52 + 11732439 AAAAAGAGCAAAACTTGCCCTCATTTTCCCCT-CAGTCCAATGTGTGTTTCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56843194 52 + 57149010 AAAAAGACCAAAACTTGCCCTCATTTTCCCCT-CAGCCCTATTCGTGTTTCCT i micMur3.chr18 I 12 C 0 s proCoq1.NW_012150197v1 1836532 52 - 2029793 aaaaaGACCAGAACTTGCCCTCATTTTCCCCT-CAGCCCTATTCGTGTTTCCT i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22823252 52 + 22939663 aaaaaGAGCAAAACTTGCCCTCATTTTCCCCT-CAGCCCCATTTGTGTTTCTT i otoGar3.GL873542 I 5 C 0 s mm10.chr2 181773985 51 + 182113224 AAGAAGAACAAAATTTGCCCCTGGTCTCTCTTGTAGCCCTGTT--TGTTTCCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47585872 51 + 47698779 aaaaagaggaaaaCTTGCTCCCATTT-CCCCT-GGGCCCTGGTGACATTCCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223730 52 - 397369 AGAACAAGCAAAACTTTCCTTCATTTTCCACC-CTGCCCTGCTTGCTTGTCTA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=8399.000000 s hg38.chr20_KI270870v1_alt 86040 3 + 183433 GCC s panPan2.chr20 62088279 3 + 62195757 GCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476024 3 - 578057 GCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001977 3 - 110113093 GCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728185 1 - 92844088 G-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396163 1 + 96509753 G-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867176 1 - 16982598 G-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668381 3 - 3785965 GCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53508 3 - 179258 GCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539319 3 - 5823884 GCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22900 3 + 372756 ACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260268 3 + 16356641 GCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129387 3 + 1231380 GCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657872 3 + 11732439 GCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56843246 3 + 57149010 GCC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1836584 3 - 2029793 GCC i proCoq1.NW_012150197v1 C 0 I 500 s otoGar3.GL873542 22823304 3 + 22939663 GCC i otoGar3.GL873542 C 0 I 27 s mm10.chr2 181774036 3 + 182113224 GAT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 223782 3 - 397369 GCA i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47585923 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e panTro5.chr20 66326191 535 + 66533130 I a score=9555.000000 s hg38.chr20_KI270870v1_alt 86043 1 + 183433 A s panPan2.chr20 62088282 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476027 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001980 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3668384 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53511 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539322 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22903 1 + 372756 A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260271 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129390 1 + 1231380 A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657875 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56843249 1 + 57149010 A i micMur3.chr18 C 0 I 3086 s otoGar3.GL873542 22823334 1 + 22939663 A i otoGar3.GL873542 I 27 C 0 s mm10.chr2 181774039 1 + 182113224 A i mm10.chr2 C 0 I 6 s dasNov3.JH569290 223785 1 - 397369 A i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e canFam3.chr24 47585923 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e macNem1.NW_012014244v1 16867177 0 - 16982598 C e panTro5.chr20 66326191 535 + 66533130 I e rheMac8.chr10 92728186 0 - 92844088 C e macFas5.chr10 96396164 0 + 96509753 C a score=221454.000000 s hg38.chr20_KI270870v1_alt 86044 49 + 183433 GTGTTTCCTCCAGATG--------------CCCCAAACCCCGGAGCAGAAG---CCCCTGTGACTG s panPan2.chr20 62088283 49 + 62195757 GTGTTTCCTCCAGATG--------------CCCCAAACCCCGGAGCAGAAG---CTCCTGTGACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476028 49 - 578057 GTGTTTCCTCCAGATG--------------CCCCAAACCTCAGAGCAGAAG---CCCCTGTGACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110001981 49 - 110113093 GTGTTTCCTCCAGATG--------------CCCCAAACCCCGGAGCAGAAG---CCCCTGTGACTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728186 26 - 92844088 -------------------------------------CCCCGTAGCAGAAG---CCCCTGCAGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396164 26 + 96509753 -------------------------------------CCCCGTAGCAGAAG---CCCCTGCAGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867177 26 - 16982598 -------------------------------------CCCCGTAGCAGAAG---CCCCTGCAGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668385 48 - 3785965 GTGTTTCCTCCAGGTG--------------CCCCAAACCCCGTGGCAGAA----CCCCAGCGGCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53512 48 - 179258 GTGTTTCCTCCAGGTG--------------CCCCAAACCCCGTGGCAGAA----CCCCAGCGGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539323 48 - 5823884 GCGTTTCCTCCAGGTG--------------CCCCAA-ACCTGGAGCAGAAG---CCCCTGCGACTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22904 49 + 372756 ATGTTTCCTCCAGATG--------------CCCCAAACCCAGGAGCAGAAG---CCCCTGTGACTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260272 49 + 16356641 ATGTTTCTTCCAGATG--------------CCCCAAACCCAGGAGCAGAAG---CCCCTGCGACTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129391 49 + 1231380 ATGTTTCTTCCAGATG--------------CCCCGAACCCAGGAGCAGAAG---CCCCTGTGACTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657876 48 + 11732439 ATGTTTCTTCCAGATG--------------CCCCAAACCCAGGAGCAGAA----CCCCTGTGACTG i aotNan1.NW_018500483v1 C 0 I 63 s otoGar3.GL873542 22823335 52 + 22939663 GTGCCACCTCTAGATGT-------------CCCCAAATTCAGGAATGGAAT-GCCTCCTGCAACTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181774046 66 + 182113224 ATTTTGTTCCCGGACCTGTCCACTCCTATCCACCAAGGGTAGGGACAAAAATGTCTACTGCAACTG i mm10.chr2 I 6 C 0 s canFam3.chr24 47585923 8 + 47698779 --------------------------------------------GCAGAAG---G----------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223786 47 - 397369 AAGCTCTTCTCAGA----------------CCCCAAGCCCAGTCACGGAAG---CCCCCACAAATC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e panTro5.chr20 66326191 535 + 66533130 I a score=18386.000000 s hg38.chr20_KI270870v1_alt 86093 2 + 183433 TG s panPan2.chr20 62088332 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476077 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002030 2 - 110113093 CG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728212 2 - 92844088 TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396190 2 + 96509753 TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867203 2 - 16982598 TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668433 2 - 3785965 TG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53560 2 - 179258 TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539371 2 - 5823884 TG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22953 2 + 372756 CA i calJac3.chrUn_GL286459 C 0 I 3 s saiBol1.JH378156 16260321 2 + 16356641 TG i saiBol1.JH378156 C 0 I 3 s cebCap1.NW_016107870v1 1129440 2 + 1231380 TG i cebCap1.NW_016107870v1 C 0 I 37 s otoGar3.GL873542 22823387 2 + 22939663 TG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181774112 2 + 182113224 TA i mm10.chr2 C 0 C 0 s canFam3.chr24 47585931 2 + 47698779 TG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223833 2 - 397369 TG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e panTro5.chr20 66326191 535 + 66533130 I a score=108188.000000 s hg38.chr20_KI270870v1_alt 86095 24 + 183433 GCCCCCCAGGGT--------GTGGAGAGGAAG s panPan2.chr20 62088334 24 + 62195757 GCCCCCCAGGGT--------GTGGAGAGGAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476079 23 - 578057 G-CCCCCAGGGT--------GTGGAGAGGAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002032 24 - 110113093 GCCCCGCAGGGT--------GTGGAGAGGAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728214 24 - 92844088 GCCCTCCAGCGT--------GTGGAGTGGAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396192 24 + 96509753 GCCCTCCAGCGT--------GTGGAGTGGAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867205 24 - 16982598 GCCCTCCAGCGT--------GTGGAGTGGAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668435 24 - 3785965 GCCCTCCAGCGT--------GTGGAGTGGAAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53562 24 - 179258 GCCCTCCAGCGT--------GTGGAGTGGAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539373 24 - 5823884 GCCCTCCAGGGT--------GTGGAGTGGAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22958 24 + 372756 CTCTTCCAGAGT--------GTGGAGCAGAAG i calJac3.chrUn_GL286459 I 3 C 0 s saiBol1.JH378156 16260326 24 + 16356641 CTCTTCCAGAGT--------GTGGAGCGGAGG i saiBol1.JH378156 I 3 C 0 s otoGar3.GL873542 22823389 15 + 22939663 CCCTTCCAGGAT--------ATG--------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181774114 32 + 182113224 CTCTTCCAGGGTTGGAAGGGTTGGGGAGGAAG i mm10.chr2 C 0 I 299 s canFam3.chr24 47585933 14 + 47698779 ---GCCGGGTGG--------GTGGG------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223835 16 - 397369 --------GGCT--------CTGAGAAGGGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e panTro5.chr20 66326191 535 + 66533130 I a score=-10933.000000 s hg38.chr20_KI270870v1_alt 86119 9 + 183433 AGGCCCTC-------------------------------------------------------------G s panPan2.chr20 62088358 70 + 62195757 AGGCCCTCGGGGCGGGGACAAGAGGGCACCCCTCTCCGGGGGCGGGGACAAGAGGGCACCCCCTCTCCGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476102 9 - 578057 AGGCCCTC-------------------------------------------------------------G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002056 9 - 110113093 AGGCCCTC-------------------------------------------------------------G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728238 9 - 92844088 AGGCACTC-------------------------------------------------------------G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396216 9 + 96509753 AGGCACTC-------------------------------------------------------------G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867229 8 - 16982598 AGGCAC-C-------------------------------------------------------------G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668459 9 - 3785965 AGGCACTC-------------------------------------------------------------G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53586 9 - 179258 AGGCACTC-------------------------------------------------------------G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539397 9 - 5823884 AGGCACTC-------------------------------------------------------------G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 22982 9 + 372756 AGGCCTTC-------------------------------------------------------------G i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16260350 5 + 16356641 AGGCC----------------------------------------------------------------- i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47585947 9 + 47698779 ATGCTGAT-------------------------------------------------------------G i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223851 4 - 397369 GGGT------------------------------------------------------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e panTro5.chr20 66326191 535 + 66533130 I e otoGar3.GL873542 22823404 0 + 22939663 C a score=16127.000000 s hg38.chr20_KI270870v1_alt 86128 3 + 183433 GGG s panPan2.chr20 62088428 3 + 62195757 GGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476111 3 - 578057 GGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002065 3 - 110113093 GGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728247 3 - 92844088 GGG i rheMac8.chr10 C 0 I 15 s macFas5.chr10 96396225 3 + 96509753 GGG i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16867237 3 - 16982598 GGG i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3668468 3 - 3785965 GGG i cerAty1.NW_012001373v1 C 0 I 1 s manLeu1.NW_012101652v1 53595 3 - 179258 GGG i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5539406 3 - 5823884 GGG i colAng1.NW_012114444v1 C 0 I 1 s canFam3.chr24 47585956 3 + 47698779 GTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223855 3 - 397369 GAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e saiBol1.JH378156 16260355 0 + 16356641 C e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e calJac3.chrUn_GL286459 22991 2 + 372756 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e panTro5.chr20 66326191 535 + 66533130 I e otoGar3.GL873542 22823404 0 + 22939663 C a score=27482.000000 s hg38.chr20_KI270870v1_alt 86131 7 + 183433 CGGGGAC s panPan2.chr20 62088431 7 + 62195757 CGGGGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476114 7 - 578057 CGGGGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002068 7 - 110113093 CGGGGAC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96396229 7 + 96509753 CGGGGAC i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16867241 7 - 16982598 CGGGGAC i macNem1.NW_012014244v1 I 1 I 7 s cerAty1.NW_012001373v1 3668472 7 - 3785965 CGGGGAC i cerAty1.NW_012001373v1 I 1 C 0 s manLeu1.NW_012101652v1 53599 7 - 179258 CGGGGAC i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5539410 7 - 5823884 CCGGGAC i colAng1.NW_012114444v1 I 1 C 0 s canFam3.chr24 47585959 7 + 47698779 CAGGGAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223858 7 - 397369 CAGTGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e saiBol1.JH378156 16260355 0 + 16356641 C e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e calJac3.chrUn_GL286459 22991 2 + 372756 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e panTro5.chr20 66326191 535 + 66533130 I e rheMac8.chr10 92728250 15 - 92844088 I e otoGar3.GL873542 22823404 0 + 22939663 C a score=6438.000000 s hg38.chr20_KI270870v1_alt 86138 8 + 183433 AAGAGGGC s panPan2.chr20 62088438 8 + 62195757 AAGAGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476121 8 - 578057 AAGAGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002075 8 - 110113093 AAGAGGGC i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3668479 6 - 3785965 --GAGGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53606 6 - 179258 --GAGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539417 8 - 5823884 AAGAGGGC i colAng1.NW_012114444v1 C 0 C 0 s canFam3.chr24 47585966 1 + 47698779 ---A---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223865 3 - 397369 AAG----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e saiBol1.JH378156 16260355 0 + 16356641 C e macNem1.NW_012014244v1 16867248 7 - 16982598 I e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e calJac3.chrUn_GL286459 22991 2 + 372756 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e panTro5.chr20 66326191 535 + 66533130 I e rheMac8.chr10 92728250 15 - 92844088 I e otoGar3.GL873542 22823404 0 + 22939663 C e macFas5.chr10 96396236 0 + 96509753 C a score=5865.000000 s hg38.chr20_KI270870v1_alt 86146 4 + 183433 ACCC s panPan2.chr20 62088446 4 + 62195757 ACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476129 4 - 578057 ACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002083 4 - 110113093 ACCC i nomLeu3.chr13 C 0 I 30 s cerAty1.NW_012001373v1 3668485 4 - 3785965 ACCC i cerAty1.NW_012001373v1 C 0 I 12 s manLeu1.NW_012101652v1 53612 4 - 179258 ACCC i manLeu1.NW_012101652v1 C 0 I 12 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e canFam3.chr24 47585967 0 + 47698779 C e colAng1.NW_012114444v1 5539425 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223868 0 - 397369 C e saiBol1.JH378156 16260355 0 + 16356641 C e macNem1.NW_012014244v1 16867248 7 - 16982598 I e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e calJac3.chrUn_GL286459 22991 2 + 372756 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e panTro5.chr20 66326191 535 + 66533130 I e rheMac8.chr10 92728250 15 - 92844088 I e otoGar3.GL873542 22823404 0 + 22939663 C e macFas5.chr10 96396236 0 + 96509753 C a score=16606.000000 s hg38.chr20_KI270870v1_alt 86150 46 + 183433 CTCTCC-AGGGTG-GGGACAAGAGGGCACCCCTCTCCAGGGGTGGGGA s panTro5.chr20 66326726 44 + 66533130 CTCTCC-AGGGTG-GGGACATGAG--CACCCCTCTCCAGGGGTGGGGA i panTro5.chr20 I 535 C 0 s panPan2.chr20 62088450 46 + 62195757 CTCTCC-AGGGCG-GGGGCAAGAGGGCACCCCTCTCCAGGGGTGGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476133 46 - 578057 CTCTCC-AGGGTG-GGGACAAGAGGGCACCCCTCTCCGGGGGCGGGGA i gorGor5.CYUI01015848v1 C 0 I 263 s nomLeu3.chr13 110002117 47 - 110113093 CTCTCCGGGGGCG-GGGACAAGAGGGCACCCCTCTCCGGGGGCGGGGA i nomLeu3.chr13 I 30 C 0 s saiBol1.JH378156 16260355 15 + 16356641 ---------------------------------TTCCGGGGGTGGGGG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22823404 14 + 22939663 --------GGATG-GAGAAAGGA------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47585967 35 + 47698779 CTCCCC-AGACCC-AGGACGCAA----ACCGCCAGCCAGAG------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 223868 33 - 397369 ---TCA-AGGGTGAGGGGTGAGAGG-----------CTGGGATGGGCA i dasNov3.JH569290 C 0 I 1 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e cerAty1.NW_012001373v1 3668489 12 - 3785965 I e colAng1.NW_012114444v1 5539425 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e manLeu1.NW_012101652v1 53616 12 - 179258 I e macNem1.NW_012014244v1 16867248 7 - 16982598 I e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e calJac3.chrUn_GL286459 22991 2 + 372756 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e rheMac8.chr10 92728250 15 - 92844088 I e macFas5.chr10 96396236 0 + 96509753 C a score=15438.000000 s hg38.chr20_KI270870v1_alt 86196 20 + 183433 CATGAGGGCAC--CCCTCTCCG s panTro5.chr20 66326770 20 + 66533130 CATGAGGGTAC--CCCTCTCCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62088496 20 + 62195757 CATGAGGGCAC--CCCTCTCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476442 19 - 578057 CAAGAGGGCAC--CCCTCTCC- i gorGor5.CYUI01015848v1 I 263 C 0 s nomLeu3.chr13 110002164 20 - 110113093 CAAGAGGGCAC--CCCTCTCTG i nomLeu3.chr13 C 0 C 0 s otoGar3.GL873542 22823418 11 + 22939663 -ATCAGGCCAG--C-------- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 223902 22 - 397369 CCTGGGGGTACAGCCCTCCCCG i dasNov3.JH569290 I 1 I 995 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e canFam3.chr24 47586002 0 + 47698779 C e cerAty1.NW_012001373v1 3668489 12 - 3785965 I e colAng1.NW_012114444v1 5539425 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e manLeu1.NW_012101652v1 53616 12 - 179258 I e saiBol1.JH378156 16260370 0 + 16356641 C e macNem1.NW_012014244v1 16867248 7 - 16982598 I e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e calJac3.chrUn_GL286459 22991 2 + 372756 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e rheMac8.chr10 92728250 15 - 92844088 I e macFas5.chr10 96396236 0 + 96509753 C a score=25925.000000 s hg38.chr20_KI270870v1_alt 86216 30 + 183433 GGGGCGGGGACAAGAGGGCACCCCTCTCCA s panTro5.chr20 66326790 30 + 66533130 GGGGCAGGGACAAGAGGGCACCCCTCTCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62088516 30 + 62195757 GGGGCAGGGACAAGAGGGCACCCCTCTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476461 30 - 578057 GGGGCGGGGACAAGAGGGCACCCCTCTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002184 30 - 110113093 GGGGTGGGGACAAGAGGGCACCCCTCTCCA i nomLeu3.chr13 C 0 I 30 s saiBol1.JH378156 16260370 22 + 16356641 ---CTGGGGACCAAGGAGCACCCCT----- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22823429 15 + 22939663 -------------GAAGGCAGCCACCTC-- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47586002 15 + 47698779 ------GGGCCCCCGGGGCAC--------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e cerAty1.NW_012001373v1 3668489 12 - 3785965 I e colAng1.NW_012114444v1 5539425 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 53616 12 - 179258 I e macNem1.NW_012014244v1 16867248 7 - 16982598 I e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e calJac3.chrUn_GL286459 22991 2 + 372756 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e rheMac8.chr10 92728250 15 - 92844088 I e macFas5.chr10 96396236 0 + 96509753 C a score=4500.000000 s hg38.chr20_KI270870v1_alt 86246 3 + 183433 GGG s panTro5.chr20 66326820 3 + 66533130 GGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62088546 3 + 62195757 GGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476491 3 - 578057 GGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002244 3 - 110113093 GGG i nomLeu3.chr13 I 30 C 0 s calJac3.chrUn_GL286459 22993 3 + 372756 GGG i calJac3.chrUn_GL286459 I 2 I 7 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e canFam3.chr24 47586017 0 + 47698779 C e cerAty1.NW_012001373v1 3668489 12 - 3785965 I e colAng1.NW_012114444v1 5539425 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 53616 12 - 179258 I e saiBol1.JH378156 16260392 0 + 16356641 C e macNem1.NW_012014244v1 16867248 7 - 16982598 I e cebCap1.NW_016107870v1 1129442 37 + 1231380 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e rheMac8.chr10 92728250 15 - 92844088 I e otoGar3.GL873542 22823444 0 + 22939663 C e macFas5.chr10 96396236 0 + 96509753 C a score=12756.000000 s hg38.chr20_KI270870v1_alt 86249 9 + 183433 CAGGGACAA s panTro5.chr20 66326823 9 + 66533130 CAGGGACAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62088549 9 + 62195757 CAGGGACAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476494 9 - 578057 CGGGGACAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002247 9 - 110113093 CGGGGACAA i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 23003 9 + 372756 CAGCAACCA i calJac3.chrUn_GL286459 I 7 C 0 s cebCap1.NW_016107870v1 1129479 9 + 1231380 CAGGGACCA i cebCap1.NW_016107870v1 I 37 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e canFam3.chr24 47586017 0 + 47698779 C e cerAty1.NW_012001373v1 3668489 12 - 3785965 I e colAng1.NW_012114444v1 5539425 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 53616 12 - 179258 I e saiBol1.JH378156 16260392 0 + 16356641 C e macNem1.NW_012014244v1 16867248 7 - 16982598 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e rheMac8.chr10 92728250 15 - 92844088 I e otoGar3.GL873542 22823444 0 + 22939663 C e macFas5.chr10 96396236 0 + 96509753 C a score=8742.000000 s hg38.chr20_KI270870v1_alt 86258 6 + 183433 GAGGGT s panTro5.chr20 66326832 6 + 66533130 GACGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62088558 6 + 62195757 GACGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476503 6 - 578057 GAGGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002256 6 - 110113093 GAGGGC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96396236 6 + 96509753 GAGGGC i macFas5.chr10 C 0 C 0 s calJac3.chrUn_GL286459 23012 6 + 372756 GGGAGC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1129488 6 + 1231380 GGGAGC i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47586017 2 + 47698779 ----GT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e cerAty1.NW_012001373v1 3668489 12 - 3785965 I e colAng1.NW_012114444v1 5539425 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 53616 12 - 179258 I e saiBol1.JH378156 16260392 0 + 16356641 C e macNem1.NW_012014244v1 16867248 7 - 16982598 I e aotNan1.NW_018500483v1 2657924 63 + 11732439 I e rheMac8.chr10 92728250 15 - 92844088 I e otoGar3.GL873542 22823444 0 + 22939663 C a score=7975.000000 s hg38.chr20_KI270870v1_alt 86264 2 + 183433 AC s panTro5.chr20 66326838 2 + 66533130 AC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62088564 2 + 62195757 AC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476509 2 - 578057 AC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002262 2 - 110113093 AC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96396242 2 + 96509753 AC i macFas5.chr10 C 0 C 0 s colAng1.NW_012114444v1 5539425 2 - 5823884 AC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23018 2 + 372756 AC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1129494 2 + 1231380 AC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657987 2 + 11732439 AC i aotNan1.NW_018500483v1 I 63 C 0 s canFam3.chr24 47586019 2 + 47698779 GT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e cerAty1.NW_012001373v1 3668489 12 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 53616 12 - 179258 I e saiBol1.JH378156 16260392 0 + 16356641 C e macNem1.NW_012014244v1 16867248 7 - 16982598 I e rheMac8.chr10 92728250 15 - 92844088 I e otoGar3.GL873542 22823444 0 + 22939663 C a score=169968.000000 s hg38.chr20_KI270870v1_alt 86266 28 + 183433 CCCTCTCCGGAGCTAGTGGGCCTGTTTT s panTro5.chr20 66326840 28 + 66533130 CCCTCTCCGGAGCTAGTGGGCCTGTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62088566 28 + 62195757 CCCTCTCCGGAGCTAGTGGGCCTGTTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476511 28 - 578057 CCCTCCCCGGAGCTAGTGGGCCTGTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002264 28 - 110113093 CCCTCTCCGGAGCTAGTGGAGCTGTTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728265 28 - 92844088 CCCTCTCCGGAGCTAGTGGGGCTGTTTT i rheMac8.chr10 I 15 C 0 s macFas5.chr10 96396244 27 + 96509753 -CCTCTCCGGAGCTAGTGGGGCTGTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867255 28 - 16982598 CCCTCTCCGGAGCTAGTGGGGCTGTTTT i macNem1.NW_012014244v1 I 7 C 0 s colAng1.NW_012114444v1 5539427 28 - 5823884 CCCTCTCCGGAGCTAGTGGGGCTGTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23020 28 + 372756 CCCTCTCTGGAGTTAGTGGGGCTGTTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260392 24 + 16356641 ----CTCTGGAGCTAGCGGGGCTGTTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129496 28 + 1231380 CCCTCTCTGGAGCTAGTGGGGCTGTTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2657989 28 + 11732439 CCCTCTCTGGAGCTGGTGGGGCTGTTCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22823444 14 + 22939663 ------CCAGAGATCTTGGG-------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47586021 19 + 47698779 CTCGCCCCTGAGA-GGTGGG-------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e cerAty1.NW_012001373v1 3668489 12 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 53616 12 - 179258 I a score=2647023.000000 s hg38.chr20_KI270870v1_alt 86294 346 + 183433 GGACCCGCTGCTGG--GAAAGGCTGGGGGCAGGGG--CAAAT----GT-----GGGGGG-TCCTGTGTGGGCTGAGGGAGT-----CC-----TGTTCCA-------------------------CCTTCCCCTCAGCC--------------------------------CCATGGGACCCGCAGTTTCTAGGGCATGGGTTCCACCTTCTTCATGGAAATTTCCAAGCTTGTCAGACTTTCTCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCAGGATGCCCCCAGGAACAAAGCCAGCCATCCCTGAGAGAAACCCTGGGTGGGGCTGGGGCCGGCAC--CTGCC-CA-GCCAGCTTTGGAAGCAGACTTGGCTGAGCACATCAT-GGAC-TTCAGG--GTCTTCCAGGAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG s panTro5.chr20 66326868 354 + 66533130 GGACCCGCTGCTGG--GAAAGGCTGGGGGCAGGGG--CAAAT----GT-----GGGGGGGTCCTGTGTGGGCTGAGGGAGT-----CC-----TGTTCCA-------------------------CCTTCCTCTCAGCC--------------------------------CCATGGGACCCGCAGTTTCTAGGGCATGGGTTCCACCTTCTTCATGGAAATTTCCAAGCTTGTCAGACTTTCTCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCAGGATGCCCCCAGGAACAAAGCCGGCCATCCCTGAGAGAAACCCTGGGTGGGGCTGCGG-CGGCACGACTGCCTCAGGCCAGC-TTGGAAGCAGA-TAGGCTGGGCACATCATCGGACTTTCAGGCCGTCTTCATGGAG-AGTCCTGGG-----GACAGGCGTTGAGGTGGAG i panTro5.chr20 C 0 I 47 s panPan2.chr20 62088594 347 + 62195757 GGACCCGCTGCTGG--GAAAGGCTGGGGGCAGGGG--CAAAT----GT-----GGGGGGGTCCTGTTTGGGCTGAGGGAGT-----CC-----TGTTCCA-------------------------CCTTCCTCTCAGCC--------------------------------CCATGGGACCCGCAGTTTCAAGGGCATGGGTTCCACCTTCTTCATGGAAATTTCCAAGCTTGTCAGACTTTCTCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCAGGATGCCCCCAGGAACAAAGCCGGCCATCCCTGAGAGAAACCCTGGGTGGGGCTGGGGCCGGCAC--CTGCC-CA-GCCAGCTTTGGAAGCAGGCTTGGCTGAGCACATCAT-GGAC-TTCAGG--GTCTTCCAGGAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476539 347 - 578057 GGACCCGCTGCTGG--GAAAGGCTGGGGGCAGGGG--CAAAT----GT-----GGGGGGGTCCTGTGTGGGCTGAGGGAGT-----CC-----TGTTCCA-------------------------TCTTCCTCTCAGCC--------------------------------CCATGGGACCCGCAGTTTCTAGGGCATGGGTTCCACCTTCTTCATGGAAATTTCCAAGCTTGTCAGACTTTCTCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCAGGATGCCCCCAGGAACAGAGCCGGCCATCCCTGAGAGAAACCCTGGGTGGGGCTGGGGCCGGCAC--CTGCC-CA-GCCAGCTTTGGAAGCAGACTTGGCTGAGCACATCAT-GGAC-TTCAGG--GTCTTCCAGGAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002292 362 - 110113093 GGACCCCCTGCTGG--GAAAGGCTGGGGGCAGGGG--CAAATGGCGGC-----GGGGGGGTCCTGTGTGGGCTGAGGGAGT-----CC-----TGTTCCG-------------------------CCTTCCTCTCAGCC--------------------------------CCATGGGACCCGCAGCTTCTAAGGCCTGGGTTCCACCTTCTTTATGGAAATTTCCAAGCTTGTCAGACTTTCCCAGGTGCCTGGTC-----------CCCTCGGCTTcccaggaggcccccaggaggcccccaggaACAGAGCCGGCCATCCCTGAGAGAAACCCTGGGTGGGGCTGGGGTCTGCAC--CTGCC-CA-GCCAGCTTTGGAAACAGACTTGGATGAGCACATCGT-GGAC-TTTAGG--GTCTTCCAGGAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728293 340 - 92844088 GGAGCCGCTGCTGG--GAAAGACTGGGGGCTGGGG--CAAAT----GC-----GGGGGG-TCCAGTGTGGGCTGAGGGAGT-----CC-----TGTTCCG-------------------------CCTTCCTCTCAGCC--------------------------------CCATAGGACCCGTCGTTTCTAGGGCATGGGTTCCACCTTCTTTATGGAAATTTCCAAGCTTGTCAGACTTTCCCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCCGGAGGCCCCCAGGAACAGAGCCAGCCATCCCCGAGAGAAA-CCTGGGTGGGGCTGGGGCCAGCAC--CTGTC-CA-GCCAGCTTTGGAAGCA-----GGCCGAGTACATCAC-GGAC-TTTAGG--GTCTTCCAGCAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396271 340 + 96509753 GGAGCCGCTGCTGG--GAAAGACTGGGGGCTGGGG--CAAAT----GC-----GGGGGG-TCCAGTGTGGGCTGAGGGAGT-----CC-----TGTTCCG-------------------------CCTTCCTCTCAGCC--------------------------------CCATAGGACCCGTCGTTTCTAGGGCATGGGTTCCACCTTCTTTATGGAAATTTCCAAGCTTGTCAGACTTTCCCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCCGGAGGCCCCCAGGAACAGAGCCGGCCATCCCCGAGAGAAA-CCTGGGTGGGGCTGGGGCCGGCAC--CTGTC-CA-GCCAGCTTTGGAAGCA-----GGCCGAGTACATCAC-GGAC-TTTAGG--GTCTTCCAGCAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867283 339 - 16982598 GGAGCCGCTGCTGG--GAAAGACTGGGGGCTGGGG--CAAAC----GC-----GGGGGG-TCCAGTGTGGGCTGAGGGAGT-----CC-----TGTTCCG-------------------------CCTTCCTCTCAGCC--------------------------------CCATAGGACCCGTCGTTTCTAGGGCATGGGTTCCACCTTCTTTATGGAAATTTCCAAGCTTGTCAGACTTTCTCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCCGGAGGCCCCCAGGAACAGAGCCGGCCATCCCCGAGAGAAA--CTGGGTGGGGCTGGGGCCGGCAC--CTGTC-CA-GCCAGCTTCGGAAGCA-----GGCCGAGTACATCAC-GGAC-TTTAGG--GTCTTCCAGCAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668501 340 - 3785965 GGACCCGCTGCTGG--GAAAGACTGGGGGCTGGGG--CAAAC----GC-----GGGGGG-TCCAGTGTGGGCTGAGGGAGT-----CC-----TGTTCCG-------------------------CCTTCCTCTCAGCC--------------------------------CCATAGGACCCGTCGTTTCTAGGGCATGGGTTCCACCTTCTTTATGGAAATTTCCAAGCTTGTCAGACTTTCCCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCCGGAGGCCCCCAGGAACAGAGCCGGCCATCCCCGAGAGAAA-CCTGGGTGGGGCTGGGGCCTGCAC--CTGTC-CA-GCCAGCTTTGGAAGCG-----GGCCGAGTACATCAC-GGAC-TTTAGG--GTCTTCCAGCAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i cerAty1.NW_012001373v1 I 12 C 0 s manLeu1.NW_012101652v1 53628 340 - 179258 GGACCCGCTGCTGG--GAAAGACTGGGGGCTGGGG--CAAAC----GC-----GGGGGG-TCCAGTGTGGGCTGAGGGAGT-----CC-----TGTTCCG-------------------------CCTTCCTCTCAGCC--------------------------------CCATAGGACCCGTCGTTTCTAGGGCATGGGTTCCACCTTCTTTATGGAAATTTCCAAGCTTGTCAGACTTTCCCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCCGGAGGCCCCCAGGAACAGAGCCGGCCATCCCCGAGAGAAA-CCTGGGTGGGGCTGGGGCCTGCAC--CTGTC-CA-GCCAGCTTTGGAAGCA-----GGTCGAGTACGTCAC-GGAC-TTTAGG--GTCTTCCAGCAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i manLeu1.NW_012101652v1 I 12 C 0 s colAng1.NW_012114444v1 5539455 344 - 5823884 GGACCTGCTGCTGG--GAAAGAC--GGGGCTGGGG--CAAAT----GCGGGGGGGGGGG-TCCAGTGTGGGCTGAGGGAGT-----CC-----TGTTCCG-------------------------CCTTCCTCTCAGCC--------------------------------CCATAGGACCCGTCGTTTCTAGGGCATGGGTTCCACCTTCTTTATGGAAATGTCCAAGCTTGTCAGACTTTCCCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCCAGAGGCCCCCAGGAACAGAGCCGGCCATCCCCGAGAGAAACCCTGGGTGGGGCTGGGGCCTGCAC--CTGTT-CA-GCCAGCTTTGGAAGCA-----GGCCGAGTACATCAA-GGAC-TTTAGG--GTCTTCCAGCAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23048 325 + 372756 GGACCTGCTGCTGG--GAGAAGCTGGGGGCAGGGA-TCAGAT----GA-----GGGG----------------------GT-----CC-----TGTTCTG-------------------------CCATCATCACAGCC--------------------------------CCATGGGACCCACAGTTTCTGGGACATGGCTTCCACTTTCTTCATGGAAATTTCCAAGCTTGTCAGACTTTCCCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCAGGAGT-CCCCAGGAACAGAGCCGACCATCCCTGAGAGAAGCCCTGGGTGGAGCTGGGGCCTGTGC--CTGTC-CA-GCCAGCTTTGGCAGCCAGCTTGTCTGAGCACATCAT-AGAC-TTTAGG--GGCCTCCAGGAGCAGTCCT-GG-----GACAGAGG--GAGGTGGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260416 344 + 16356641 GGACCTGCTGCTGGGAGAGAGGCTGGGGGCAGGGA-TCAGAT----GA-----GGGGG--TTCCGTGTGGGCTGAGGCAGT-----CC-----TGTTCCA-------------------------CCATCATCACAGCC--------------------------------CCATGGGACCCACAGTTTCTAGGACATGGCTTCTACCCTCTTCATGGACATTTCCAAGCTTGTCAGACTTTCCCAGGTGCCTGGT------------CCCGGGGCTT-----------TCCAGGAGG---CCAGGAACAGAGCCGACCTTCCCTGAGAGAAACCCTGGGTGGAGCTGGGGCCTGTGC--CTGTC-CA-GCCAGCTTTGGCAGCCAGCTTGGCTGAGCACGTCGT-AGAC-TTTAAG--GCTCTCCAGGAGCGGTCCT-GG-----GGTAGAGG--GAGGTGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129524 343 + 1231380 GGACCCGCTGCTGG--GAGAGGCTGGGGGCAGGGA-TCAGAT----GA-----GGGG---TCCTGTGTGGGCTGAGGCAGT-----CC-----TGTTCCG-------------------------CTATCATCACAGCC--------------------------------CCATGGGACCCACAGTTTCTAGGACATGGCTTCTACCTTCTTCATGGAAATTTCCAAGCTTGTCAGCCTTTCCCAGGTGCCTGGTC-----------CCTGGGGCTT-----------TCCAGGACG-CCCCAGGAACAGAGCCGACCATCCCTGAGAGAAAGCCTGGGTGGAGCTGGGGCCTGTGC--CTGTC-CA-GCCAGCTTTGGCAGCCAGCTTGGCTGAGCACATCAT-AGAC-TTCAGG--GCCCTCCAGGAGCAGTCCT--G-----GACAGAGG--GAGGTGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2658017 331 + 11732439 GGACCCGCTGCTGG--GAGAGGCTGGGGGCAGGGA-TCAGAT----GA-----GGGG---TCCCGTGTGGGCTGAGGCAGT-----CC-----CGTTCCG-------------------------CCATCATCACAGCC--------------------------------CCATGGGACCCACAGTTTCTAGGACATGGCTTCCACCTTCTTCATGGAAATTTCCAAGCTTGTCAGACTTTCCCAGGTGCCTGGTC-----------CCCTGGGCTT-----------TCCAGGAGG-CCCCGGGAACAGAGCCGACCGTCCCTGAGAGAAGCCCTGGGTGGAGCTGGGGCCTGTGC--CTGTC---------------CAGCCAGCTTGGCTGAGCACATCCT-AGAC-TTCAGG--GGCCTCCAGGAGCAGTCCT-GG-----GACAGAGG--GAGGTGAAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22823458 306 + 22939663 ---------GCAGA--GCAAGGCTGGGGGCAGGGG-TCAAAT----GA-----GGG----TCCTGTGTGGGCTGAGGTAGTCTCCCCT-----TGTCCCTGACGCAGCCCCCACACATGGCCGCCCCTCTCACACAGCCCTGGCCTCCCCATCTGAGGCAGCCCTGCTGGTCCAAGGGAAGCGTAGTTTCTAGGGCACATGCACTGCCTTCCTCATGGAGATGTTCAAAGTTGTTGTGCTGTC----AAGCTGGG-------------CCCTCAGCTT-----------TCCGGGAGG---CCAGGGGTAGAGCTAGTCATCTCAGGGAGAAGCCTTGGACAGAGCTAGGAACTGCAG--------CA----------------------GGTGGAG-------------------------------------------------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47586040 276 + 47698779 --------------------GGCTGAGGAGAGGTGCTCAGGT----CT-----GGGAGCTTCCGG---GGGCTGAGGGGTC-----TCGAGGGTGCCCCA-------------------------CCTTTCCTGCAGCC--------------------------------CCTC----CCCGACGTGTTATGGGCACAGGTGCCACTTCCTTT-TGG--ATTTTCAGGGCTGTCGGAGTCTCCTGAGGGCCCGTCCTGCCCCACTGTCCCCAGGCTC-----------TGCAGGCGG------------AAGCCAGGCA-----------------------GGCCGGGGCCT------TGGCC-CA--------------------------GGACATTTCAG-CCAC-TGCAGG--G--TTCGAGGAGCAGCGCC-GGCCGTTGCTGGAGG--GACCTGAgc i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I a score=96195.000000 s hg38.chr20_KI270870v1_alt 86640 12 + 183433 CGTCCTGCCCGG s panPan2.chr20 62088941 12 + 62195757 CGTCCTGCCCGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476886 12 - 578057 CGTCCTGCCCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002654 12 - 110113093 CGTCCTGCCCGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728633 12 - 92844088 CGTCCTGCCCGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396611 12 + 96509753 CGTCCTGCCCGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867622 12 - 16982598 CGTCCTGCCCGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668841 12 - 3785965 CGTCCTGCCCGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53968 12 - 179258 CGTCCTGCCCGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539799 12 - 5823884 CGTCCTGCCCGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23373 12 + 372756 TGTCCTGCCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260760 12 + 16356641 TGTCCTGCCTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129867 10 + 1231380 TGTCCTGCCT-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2658348 12 + 11732439 TGTCCTGCCTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22823764 12 + 22939663 TGTCTTGCCTGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47586316 10 + 47698779 cccccccccc-- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774146 299 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e panTro5.chr20 66327222 47 + 66533130 I a score=187209.000000 s hg38.chr20_KI270870v1_alt 86652 31 + 183433 AGGAGGCACCTCAGGATCCTCCTTGGTCCCA s panPan2.chr20 62088953 31 + 62195757 AGGAGGCACCTCAGGATCCTCCTTGTTCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476898 31 - 578057 AGGAGGCACCTCAGGATCCTCCTTGGTCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002666 31 - 110113093 AGGAGGCACCTCAGGATCCTCCTTGGTCCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728645 31 - 92844088 ACGAGGCATCTCAGGATCCTCCTTGGTCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396623 31 + 96509753 ACGAGGCATCTCAGGATCCTCCTTGGTCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867634 31 - 16982598 ACGAGGCATCTCAGGATCCTCCTTGGTCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668853 31 - 3785965 ACGAGGCATCTCAGGATCCTCCTTGGTCCCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 53980 31 - 179258 ACGAGGCATCTCAGGATCCTCCTTGGTCCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539811 31 - 5823884 ACCAGGCATCTCAGGATCCTCCTTGGTCCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23385 30 + 372756 AGGAGGGGCTGCAGGATCC-CCTGGGTCCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260772 30 + 16356641 AGGAGGGGATGCAGGATCC-CCCGGGTCCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129877 29 + 1231380 -GGAGGGGCTGCAGTATCC-CCCGGGTCCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2658360 30 + 11732439 AGGAGGGGCTGCAGGATCC-CCCGGGTCCCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22823776 17 + 22939663 -------------GGGTCC-TCTTGGTCCTG i otoGar3.GL873542 C 0 I 5 s mm10.chr2 181774445 31 + 182113224 AGGTTGTGCCTGAGACTCCCTTCCTATCCCA i mm10.chr2 I 299 I 6 s canFam3.chr24 47586326 18 + 47698779 --------cccccgc-----ccTGGGTCCTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e panTro5.chr20 66327222 47 + 66533130 I a score=589874.000000 s hg38.chr20_KI270870v1_alt 86683 62 + 183433 GCT----TCTCTCTTCACAGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATCACAGTCCCCCATCCT s panTro5.chr20 66327269 61 + 66533130 GCT----TCTCTC-TCACAGAGGCCTCTCACTGACGACTGGTT----------ACTT--AATCACAGTCCCCCATCCT i panTro5.chr20 I 47 C 0 s panPan2.chr20 62088984 62 + 62195757 GCT----TCTCTCTTCACAGAGGCCTC-CACTGACGACTGGTT----------ACTT-AAATCACAGTCCCCCATCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476929 62 - 578057 GCT----TCTCTCTTCACAGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATCACAGTCCCCCATCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002697 62 - 110113093 GCT----TCTCTCCTCACAGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATCACAGTCCACCATCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728676 62 - 92844088 GCT----TCTCTTCTCACAGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATCGCAATCCCCCATCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396654 62 + 96509753 GCT----TCTCTTCTCACAGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATCACAATCCCCCATCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867665 62 - 16982598 GCT----TCTCTTCTCACAGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATCGCAATCCCCCATCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3668884 62 - 3785965 GCT----TCTCTTCTCACAGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATCGCAATCCCCCATCCT i cerAty1.NW_012001373v1 C 0 I 311 s manLeu1.NW_012101652v1 54011 62 - 179258 GCT----TCTCTTCTCACAGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATCGCAATCCCCCATCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539842 62 - 5823884 GCT----TCTCTTCTCACAGAGGCCTC-CGCTGACCACTGGCT----------ACTT-AAATCACAATCCCCCATCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23415 60 + 372756 GCT----TCTCTCCTCACAGAGGCCTC-CACTGACCACTGATT----------ACTT-AAATCGCA--CCCCCATCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260802 60 + 16356641 GCT----TCTCTCCTCACAGAGGCCTC-CACTGACTGCTGGTT----------ACTT-AAATCGCA--CCACTATCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129906 60 + 1231380 GCT----TCCCTCCTCACGGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATAGTA--CCCCCAGCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2658390 60 + 11732439 GCT----TCTCTCCTCATGGAGGCCTC-CACTGACCACTGGTT----------ACTT-AAATCGCA--CCCCCATCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22823798 60 + 22939663 AAT----CTCCTGTTCACAGAGGCCTC-CATTGACATCTGGTT----------GCTT-GCATCATG--ACCCCATCCT i otoGar3.GL873542 I 5 C 0 s mm10.chr2 181774482 63 + 182113224 TCT----TGCTTCTTCCCAGAGAACTC-TACTGATAAATTATTTTTCTTATCCATGT-AAATTACAATT--------- i mm10.chr2 I 6 C 0 s canFam3.chr24 47586344 65 + 47698779 GCTCCAGCCCCTCCTCACAGAGGCCTC-CACTGACCACCTGTT----------CCCTGAAATCACA-CCCCACACCC- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I a score=62018.000000 s hg38.chr20_KI270870v1_alt 86745 6 + 183433 CATTAT s panTro5.chr20 66327330 6 + 66533130 CATTAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089046 6 + 62195757 CATTAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476991 5 - 578057 CATT-T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002759 6 - 110113093 CATTAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728738 6 - 92844088 CATTAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396716 6 + 96509753 CATTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867727 6 - 16982598 CATTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669257 6 - 3785965 CATTAT i cerAty1.NW_012001373v1 I 311 C 0 s manLeu1.NW_012101652v1 54073 6 - 179258 CATTAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539904 6 - 5823884 CATTAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23475 6 + 372756 CATTAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260862 6 + 16356641 CATTAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129966 6 + 1231380 CATTAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2658450 6 + 11732439 CGTTAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22823858 6 + 22939663 TGTTAT i otoGar3.GL873542 C 0 I 2393 s mm10.chr2 181774545 4 + 182113224 --TTGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47586409 6 + 47698779 CATTAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I a score=173048.000000 s hg38.chr20_KI270870v1_alt 86751 18 + 183433 TTTCAAAAATACATTTTG s panTro5.chr20 66327336 18 + 66533130 TTTCAAAAATACATTTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089052 18 + 62195757 TTTCAAAAATACATTTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 476996 18 - 578057 TTTCAAAAATACATTTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002765 18 - 110113093 TTTCAAAAATACATTTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728744 18 - 92844088 TTTCAAAAATACATTTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396722 18 + 96509753 TTTCAAAAATACATTTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867733 18 - 16982598 TTTCAAAAATACATTTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669263 18 - 3785965 TTTCAAAAATACATTTTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54079 18 - 179258 TTTCAAAAATACATTTTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539910 18 - 5823884 TTTCAAAACTACATTTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23481 18 + 372756 TTTCAAAAATGCTTTTTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260868 18 + 16356641 TTTCAAAAATACTTTTTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129972 18 + 1231380 TTTCAAAAATACTTTTTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2658456 18 + 11732439 TTTCAAAAATAGTTTCTG i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181774549 9 + 182113224 ---------TTGTTTTTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47586415 17 + 47698779 -TTTAAAAATATATTTTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1836587 500 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=340170.000000 s hg38.chr20_KI270870v1_alt 86769 34 + 183433 AAACAATCTCAAAGCCACAGAAACGTTTCAAGTA s panTro5.chr20 66327354 33 + 66533130 AAAC-ATCTCAAAGCCACAGAAACGTTTCAAGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089070 34 + 62195757 AAACAATCTCAAAGCCACAGAAACGTTTCAAGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477014 34 - 578057 AAACAATCTCAAAGCCACAGAAACGTTTCAAGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002783 34 - 110113093 AAACAATCTCAAAGCCACAGAAACGTTTCAAGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728762 34 - 92844088 AAACAATCTCAAAGCCACAGAAATGTTTCAGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396740 34 + 96509753 AAACAATCTCAAAGCCACAGAAATGTTTCAGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867751 34 - 16982598 AAACAATCTCAAAGCCACAGAAATGTTTCAGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669281 34 - 3785965 AAACAATCTCAAAGCCACAGAAATGTTTCAGGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54097 34 - 179258 AAACAACCTCAAAGCCACAGAAATGTTTCAGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539928 34 - 5823884 AAACAATCTCAAAGCCACAGAAATGTTTCAAGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23499 34 + 372756 AAACAATCTCAAGCCCACAAAAATGTTTCAAGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260886 34 + 16356641 AAACAATCTCAAGCCCACAGAAATGTTTCAAGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1129990 34 + 1231380 AAACAATCTCAAGCCCACAGAAATGTTTCAAGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2658474 34 + 11732439 AAGCAATCTCAAGCCCACAGAAGTGTTTCAAGTA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1837087 34 - 2029793 AAACAATCTCAAACCCACAGAAACATTTCAAGTA i proCoq1.NW_012150197v1 I 500 I 2196 s mm10.chr2 181774558 34 + 182113224 AAATAATTTCAAACCTGAAGAAGTATTTCAAGTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47586432 17 + 47698779 ----GCACTCGAGACTAC------GTT------- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=47491.000000 s hg38.chr20_KI270870v1_alt 86803 8 + 183433 AAGGGCCA s panTro5.chr20 66327387 8 + 66533130 AAAGGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089104 8 + 62195757 AAGGGCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477048 8 - 578057 AAGGGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002817 8 - 110113093 AAGAGCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728796 8 - 92844088 ACGGGCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396774 8 + 96509753 ACGGGCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867785 8 - 16982598 ACGGGCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669315 8 - 3785965 ACGGGCCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54131 8 - 179258 ACGGGCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539962 8 - 5823884 ATGGGCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23533 7 + 372756 -AAGGCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260920 8 + 16356641 GAGGGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1130024 8 + 1231380 GAGGGCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2658508 8 + 11732439 GACGGCCA i aotNan1.NW_018500483v1 C 0 I 83 s mm10.chr2 181774592 8 + 182113224 TAGAACAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47586449 5 + 47698779 ---GGCCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=120428.000000 s hg38.chr20_KI270870v1_alt 86811 21 + 183433 AGCTGTTTCTCCTGAGCGTTT s panTro5.chr20 66327395 21 + 66533130 AGCTGTTTCTCCTGAGCGTTT i panTro5.chr20 C 0 I 85093 s panPan2.chr20 62089112 21 + 62195757 AGCTGTTTCTCCTGAGCGTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477056 21 - 578057 AGCTGTTTCTCCTGAGCGTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002825 20 - 110113093 AGCTG-TTCTCCTGAGCGTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728804 21 - 92844088 AGCTGTTTCTCCTGAGCGGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396782 21 + 96509753 AGCTGTTTCTCCTGAGCGGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867793 21 - 16982598 AGCTGTTTCTCCTGAGCGGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669323 21 - 3785965 AGCTGTTTCTCCTGAGCGGTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54139 21 - 179258 AGCTGTTTCTCCTGAGTGGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539970 21 - 5823884 AGCTGTTTCTCCTGAGGGGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23540 21 + 372756 CACTGCTTTTCCCGAGCTGTT i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16260928 21 + 16356641 CACTGCTTTTCCTGAGCCATT i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1130032 21 + 1231380 CACTGCTTTTCCTGAGCCGTT i cebCap1.NW_016107870v1 C 0 I 1 s mm10.chr2 181774600 18 + 182113224 AACCACTT---CTGAACCTCT i mm10.chr2 C 0 I 1 s canFam3.chr24 47586454 5 + 47698779 -------AGTCC--------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e aotNan1.NW_018500483v1 2658516 83 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=35359.000000 s hg38.chr20_KI270870v1_alt 86832 5 + 183433 GAGAG s panPan2.chr20 62089133 5 + 62195757 GAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477077 5 - 578057 GAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002845 5 - 110113093 GAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728825 5 - 92844088 GAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396803 5 + 96509753 GAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867814 5 - 16982598 GAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669344 5 - 3785965 GAGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54160 5 - 179258 GAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539991 5 - 5823884 GAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23562 5 + 372756 GAGAG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16260950 5 + 16356641 GAGAG i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1130054 5 + 1231380 GAGAG i cebCap1.NW_016107870v1 I 1 I 57 s mm10.chr2 181774619 5 + 182113224 TAGAG i mm10.chr2 I 1 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586459 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e aotNan1.NW_018500483v1 2658516 83 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=46046.000000 s hg38.chr20_KI270870v1_alt 86837 13 + 183433 CGTGTTGCTGATG s panPan2.chr20 62089138 13 + 62195757 CGTGTTGCTGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477082 13 - 578057 CATGTTGCTGATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002850 13 - 110113093 CGTGTTGCCGATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728830 13 - 92844088 CGTGTTGCTGATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396808 13 + 96509753 CGTGTTGCTGATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867819 13 - 16982598 CGTGTTGCTGATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669349 13 - 3785965 CGTGTTGCTGATG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54165 13 - 179258 CGTGTTGCTGATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5539996 13 - 5823884 TGTGTTGCTGATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23567 3 + 372756 --TGT-------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16260955 3 + 16356641 --TGT-------- i saiBol1.JH378156 C 0 C 0 s mm10.chr2 181774624 13 + 182113224 TATGCTGCTAGTG i mm10.chr2 C 0 I 5098 s canFam3.chr24 47586459 3 + 47698779 ----------ACG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e cebCap1.NW_016107870v1 1130059 57 + 1231380 I e aotNan1.NW_018500483v1 2658516 83 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=25236.000000 s hg38.chr20_KI270870v1_alt 86850 14 + 183433 CGATGCCATCACC-A- s panPan2.chr20 62089151 14 + 62195757 CAATGCCATCACC-A- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477095 14 - 578057 CAATGTCATCACC-A- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002863 14 - 110113093 CAATGCCATCACC-A- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728843 13 - 92844088 TGAGGCCATCACC--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396821 13 + 96509753 TGAGGCCATCACC--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867832 13 - 16982598 TGAGGCCATCACC--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669362 13 - 3785965 TGAGGCCATCACC--- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54178 13 - 179258 TGAGGCCATCACC--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540009 14 - 5823884 GGAGGCCATCGCCA-- i colAng1.NW_012114444v1 C 0 I 85 s calJac3.chrUn_GL286459 23570 6 + 372756 -------ATCACC--- i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16260958 6 + 16356641 -------ATCACC--- i saiBol1.JH378156 C 0 I 1 s canFam3.chr24 47586462 10 + 47698779 ----CCCACTGCC--C i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e cebCap1.NW_016107870v1 1130059 57 + 1231380 I e aotNan1.NW_018500483v1 2658516 83 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=180366.000000 s hg38.chr20_KI270870v1_alt 86864 49 + 183433 AGGACACTTGCATGGGTGTTTCCAGCAGAGAGGCCGCTCTCCCACTGCT--- s panPan2.chr20 62089165 49 + 62195757 AGGACACTTGCGTGGGTGTTTCCAGCAGAGAGGCCGCTCTCCTACTGCT--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477109 49 - 578057 AGGACACTTGGGTGGGTGTTTCCAGCAGAGAGGCCGCTCTCCCACTGCT--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002877 49 - 110113093 AGGACACTTGGGTGGGTGTTTCCAGCAGAGAGGCCGCTCTCCCACTGCT--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728856 48 - 92844088 AGGACATGTGGGTGGGTGTTTCCAACAGAGAGGCCGCCCTCCC-CTGCT--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396834 48 + 96509753 AGGACATGTGGGTGGGTGTTTCCAACAGAGAGGCCGCCCTCCC-CTGCT--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867845 48 - 16982598 AGGACATGTGGGTGGGTGTTTCCAACAGAGAGGCCGCCCTCCC-CTGCT--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669375 48 - 3785965 AGGACATGTGGGTGGGTGTTTCCAACAGAGAGGCCGCCCTCCC-CTGCT--- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54191 48 - 179258 AGGACATGTGGGTGGGTGTTTCCAACAGAGAGGCCGCCCTCCC-CTGCT--- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 23577 47 + 372756 AGGACACTTGGGCGGGTGTTTCCAACGACAGGGTCGCCTCCCA-CTTA---- i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16260965 47 + 16356641 AGGACACTTGGGTGGGTGTTTCCAATGACAGGGTCGCCTCCCG-CTCG---- i saiBol1.JH378156 I 1 C 0 s canFam3.chr24 47586472 46 + 47698779 AGAACCCTGGTCCGGGCGTTTCCAACAAAGAGG-AGCTT-----CTGCAGAA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e colAng1.NW_012114444v1 5540023 85 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e cebCap1.NW_016107870v1 1130059 57 + 1231380 I e aotNan1.NW_018500483v1 2658516 83 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=325207.000000 s hg38.chr20_KI270870v1_alt 86913 59 + 183433 CCACCCTCACCTTCTCGGCCATCTGGTCCTCAGACCCATTCAG----------GGGTGGGTTCAGAACC s panPan2.chr20 62089214 59 + 62195757 CCACCCTCACCTTCTCGGCCATCTGGTCCTCAGACCCATTCAG----------GGGTGGGTTCAGAACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477158 59 - 578057 CCACCCTCACCTTCTTGGCCATCTGGTCCTCAGACCAATTCAG----------GGCTGGGTTCAGAACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002926 59 - 110113093 CCACCCTCACCTTCACGGCCATCTGGTCCTCAGACCCATTCAG----------GGGTGGGTTCGGAACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728904 59 - 92844088 CCAGCCCCGCCCTCACAGCCACCTGGTCCTCAGACCCATTCGG----------GAGTGAGTTAGGAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396882 59 + 96509753 CCAGCCCCGCCCTCACAGCCACCTGGTCCTCAGACCCATTCGG----------GAGTGGGTTAGGAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867893 59 - 16982598 CCAGCCCCGCCCTCACAGCCACCTGGTCCTCAGACCCATTCGG----------GAGTGGGTTAGGAACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669423 59 - 3785965 CCAGCCCCACCCTCACAGCCACCTGGTCCTCAGACACATTCGG----------GAGTGGGTTAGGAATC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54239 59 - 179258 CCAGCCCCACCCTCACAGCCCCCTGGTCCTCAGACACATTCGG----------GAGTGGGTTAGGAACC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 23624 59 + 372756 CCATTGTCTCCTTCACGGCCATCTGGTCCTCAGACCCATTCAA----------GGGTGGGCTGAGAATC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261012 59 + 16356641 CTGTCCTCTCCTCCGTGGCTGTCTGGTCCTCAGACCCAGTCAA----------GGGCGGGCCCAGAATC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1130116 59 + 1231380 CCATCCTCTCCTTCACGGCCATCTGGTCCTCAGACCCACTCAC----------AGGTGGGCTCAGAATC i cebCap1.NW_016107870v1 I 57 C 0 s aotNan1.NW_018500483v1 2658599 59 + 11732439 CCATCCTCTCCTTCACGGCCGTCTGGTCCTCAGCCCCATTCAA----------GGGTGGGCTCAGAACC i aotNan1.NW_018500483v1 I 83 I 406 s canFam3.chr24 47586518 69 + 47698779 TCTTTGTCACCTGAGCGGACATGCGGTCCCCAGACTCCTCCAGCCGTCCCAGAGGATGGGCTCCGCGTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e colAng1.NW_012114444v1 5540023 85 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=19156.000000 s hg38.chr20_KI270870v1_alt 86972 6 + 183433 ACGTGC-- s panPan2.chr20 62089273 6 + 62195757 ACGTGC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477217 6 - 578057 ACATGC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002985 6 - 110113093 ACGTGT-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728963 6 - 92844088 GCGTGC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396941 6 + 96509753 GCGTGC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867952 6 - 16982598 GCGTGC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669482 6 - 3785965 GCGTGT-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54298 6 - 179258 GCGTGT-- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 23683 6 + 372756 CCGTGT-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261071 6 + 16356641 CCGTGT-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1130175 6 + 1231380 CCGTGC-- i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47586587 6 + 47698779 --ACGCTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e colAng1.NW_012114444v1 5540023 85 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=14344.000000 s hg38.chr20_KI270870v1_alt 86978 2 + 183433 TG s panPan2.chr20 62089279 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477223 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002991 2 - 110113093 TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728969 2 - 92844088 TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396947 2 + 96509753 TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867958 2 - 16982598 TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669488 2 - 3785965 TG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54304 2 - 179258 TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540108 2 - 5823884 TG i colAng1.NW_012114444v1 I 85 C 0 s calJac3.chrUn_GL286459 23689 1 + 372756 -G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261077 2 + 16356641 CG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1130181 2 + 1231380 TG i cebCap1.NW_016107870v1 C 0 I 133 s canFam3.chr24 47586593 2 + 47698779 TG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=67609.000000 s hg38.chr20_KI270870v1_alt 86980 11 + 183433 TGCGTGGTCCT s panPan2.chr20 62089281 11 + 62195757 TGCGTGGTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477225 11 - 578057 TGCGTGGTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110002993 11 - 110113093 TGTGTGGTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728971 11 - 92844088 TGCGTGGTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396949 11 + 96509753 TGCGTGGTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867960 11 - 16982598 TGCGTGGTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669490 11 - 3785965 TGCGTGGTCCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54306 11 - 179258 TGCGTGGTCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540110 11 - 5823884 TGCGTGGTCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23690 11 + 372756 TGCTTGGTCAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261079 11 + 16356641 TGCTTGGTCAT i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47586595 11 + 47698779 TGTTTGGTCTT i canFam3.chr24 C 0 I 487 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=301869.000000 s hg38.chr20_KI270870v1_alt 86991 79 + 183433 GGTGTCTCGTTCGTCTGAAGTCGTTTTTAGCACtcctcgcctttcgtgaccttgtgcttttggaagagcgctgagccgt s panPan2.chr20 62089292 79 + 62195757 GGTGTCTCGTTCCTCTAAAGTTGTTTTTAGCACtcctcgcctttcgtgaccttgtgcttttggaagagcactgagccgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477236 79 - 578057 GGCGTCTCGTTCGTCTAAAGTCGTTTTTAGCACtcctcgcctttcgtgaccttgtgcttttggaagaacactgagctgt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003004 79 - 110113093 GGTGTttcgttcatctaaagtcgttttcagcgctcctcgcctttcatgaccttgtgcttttggaagagcgctgagccgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92728982 75 - 92844088 GGCGTCTCGTTCGTCCGAAGTCG-TTTCAG---tccctatctttcacgacctcgtgcttttggaagggtgctgagccgt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96396960 75 + 96509753 GGCGTCTCGTTCGTCCGAAGTCG-TTTCAG---tccctatctttcacgacctcgtgcttttggaagggtgctgagccgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16867971 75 - 16982598 GGCGTCTCGTTCGTCCGAAGTCG-TTTCAG---TCCCTATCTCTCACGACCTCGTGCTTTTGGAAGGGTGCTGAGCCGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669501 76 - 3785965 GGCGTCTCGTTCGTCCGAAGTCGTTTTCAG---tccctatctttcacaacctcgtgcttttggaagggtgctgagccgt i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54317 76 - 179258 GGCGTCTCGTTCGTCCCAAGTCGTTTTCAG---tccctatctttcacaacctcgtgcttttggaggggtgctgagccgt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540121 75 - 5823884 GGCGTCTCGTTCGTCCGAAGTCGTCGTCAG---TCCCCgtctttcacgacctcgtgcttttggaa-ggcgctgagccgt i colAng1.NW_012114444v1 C 0 I 4 s calJac3.chrUn_GL286459 23701 75 + 372756 GGTGCCTCGTCGGCCTCAAGTACTTTTCAG----CCTTGTCTTCCCCAACCTTGTGGTTTTGGAAAAGCACTGCTCAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261090 75 + 16356641 GGTGCCTGGTCGGCCTCAACcagtcttcag----ccttgtcttccccgaccctgtggttttggaaaatcactgctcagt i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=80677.000000 s hg38.chr20_KI270870v1_alt 87070 21 + 183433 tattcagtgggatacccttca s panPan2.chr20 62089371 21 + 62195757 tattcagtgggatgcccttca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477315 21 - 578057 tattcagtgggatgcccttca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003083 21 - 110113093 tattcggtgggatacccttca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92729057 21 - 92844088 catttggtggaatgcccttca i rheMac8.chr10 C 0 I 40 s macFas5.chr10 96397035 21 + 96509753 catttggtggagtgcccttca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16868046 21 - 16982598 CATTTGGTGGAGTGCCCTTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669577 21 - 3785965 tatttggtggaatgcccttca i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54393 21 - 179258 tatttggtggaatgcccttca i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 23776 21 + 372756 TACCTGGTGGGACGCCCGTCA i calJac3.chrUn_GL286459 C 0 I 25 s saiBol1.JH378156 16261165 21 + 16356641 tacctgggggaatgcccgtca i saiBol1.JH378156 C 0 I 25 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=12406.000000 s hg38.chr20_KI270870v1_alt 87091 6 + 183433 acgtgg s panPan2.chr20 62089392 6 + 62195757 acgtgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477336 6 - 578057 acgtgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003104 6 - 110113093 acgtgg i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96397056 6 + 96509753 gtgtgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16868067 6 - 16982598 GCGTGG i macNem1.NW_012014244v1 C 0 I 31 s cerAty1.NW_012001373v1 3669598 6 - 3785965 gtgtgg i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54414 6 - 179258 gtgtgg i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e saiBol1.JH378156 16261186 25 + 16356641 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=1500.000000 s hg38.chr20_KI270870v1_alt 87097 1 + 183433 g s panPan2.chr20 62089398 1 + 62195757 g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477342 1 - 578057 g i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003110 1 - 110113093 g i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3669604 1 - 3785965 g i cerAty1.NW_012001373v1 C 0 I 34 s manLeu1.NW_012101652v1 54420 1 - 179258 g i manLeu1.NW_012101652v1 C 0 I 34 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=9513.000000 s hg38.chr20_KI270870v1_alt 87098 19 + 183433 AGCACTGAGCCGTTATTCG s panPan2.chr20 62089399 19 + 62195757 AGCACTGAGCCGTTATTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477343 19 - 578057 AGCACTGAGCCATTATTCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003111 19 - 110113093 atcgctgaGCCGTTATTCG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66327416 85093 + 66533130 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=25751.000000 s hg38.chr20_KI270870v1_alt 87117 33 + 183433 GTGGGATACCCTTCAACGTGGGAGCACTGAGCC s panTro5.chr20 66412509 33 + 66533130 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCC i panTro5.chr20 I 85093 C 0 s panPan2.chr20 62089418 33 + 62195757 GTGAGATACCCTTCAACGTGGGAGCACTGAGCC i panPan2.chr20 C 0 T 82 s gorGor5.CYUI01015848v1 477362 32 - 578057 GTG-GATGCCCTTCAACGTGGGAGCGCTGAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003130 32 - 110113093 GTGGGATA-CCTTCAACGTGGGAGCGCTGAGCC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=14317.000000 s hg38.chr20_KI270870v1_alt 87150 19 + 183433 GTTATTCGGTGGGATACCC s panTro5.chr20 66412542 19 + 66533130 GTTATTCGGTGGGATGCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089369 19 + 62195757 gttattcagtgggatgccc i panPan2.chr20 T 82 C 0 s gorGor5.CYUI01015848v1 477394 19 - 578057 ATTATTCGGTGGGATGCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003162 18 - 110113093 GTTATTCGGTGGGATACC- i nomLeu3.chr13 C 0 I 80 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=9550.000000 s hg38.chr20_KI270870v1_alt 87169 10 + 183433 TTCAACGTGG s panTro5.chr20 66412561 10 + 66533130 TTCAACGTGG i panTro5.chr20 C 0 T 62 s panPan2.chr20 62089388 10 + 62195757 ttcaacgtgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477413 10 - 578057 TTCAACGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003260 10 - 110113093 TTCAACGTGG i nomLeu3.chr13 I 80 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=-75.000000 s hg38.chr20_KI270870v1_alt 87179 1 + 183433 C s panPan2.chr20 62089398 1 + 62195757 g i panPan2.chr20 C 0 T 41 s gorGor5.CYUI01015848v1 477423 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003270 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66412571 62 + 66533130 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=9622.000000 s hg38.chr20_KI270870v1_alt 87180 19 + 183433 AGCACTGAGCCGTTATTCG s panPan2.chr20 62089358 19 + 62195757 agcactgagccgttattca i panPan2.chr20 T 41 C 0 s gorGor5.CYUI01015848v1 477424 19 - 578057 AGCACTGAGCCATTATTCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003271 19 - 110113093 AGCGCTGAGCCGTTATTCA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66412571 62 + 66533130 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=7122.000000 s hg38.chr20_KI270870v1_alt 87199 9 + 183433 GTGAGATAC s panTro5.chr20 66412509 9 + 66533130 GTGGGATGC i panTro5.chr20 T 62 C 0 s panPan2.chr20 62089377 9 + 62195757 gtgggatgc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477443 9 - 578057 GTGAGATAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003290 9 - 110113093 GTGGGATAC i nomLeu3.chr13 C 0 T 119 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=1200.000000 s hg38.chr20_KI270870v1_alt 87208 2 + 183433 CC s panTro5.chr20 66412518 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089386 2 + 62195757 cc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477452 2 - 578057 CC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e nomLeu3.chr13 110003299 119 - 110113093 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=9550.000000 s hg38.chr20_KI270870v1_alt 87210 10 + 183433 TTCAACGTGG s panTro5.chr20 66412520 10 + 66533130 TTCAACGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089388 10 + 62195757 ttcaacgtgg i panPan2.chr20 C 0 T 41 s gorGor5.CYUI01015848v1 477454 10 - 578057 TTCAACGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003180 10 - 110113093 TTCAACGTGG i nomLeu3.chr13 T 119 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=18142.000000 s hg38.chr20_KI270870v1_alt 87220 20 + 183433 GAGCACTGAGCCGTTATTCG s panTro5.chr20 66412530 20 + 66533130 GAGCACTGAGCCGTTATTCG i panTro5.chr20 C 0 T 41 s panPan2.chr20 62089357 20 + 62195757 gagcactgagccgttattca i panPan2.chr20 T 41 C 0 s gorGor5.CYUI01015848v1 477464 20 - 578057 GAGCACTGAGCCATTATTCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003190 20 - 110113093 GAGCACTGAGCCGTTATTCG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=9206.000000 s hg38.chr20_KI270870v1_alt 87240 10 + 183433 GTGGGATGCC s panTro5.chr20 66412509 10 + 66533130 GTGGGATGCC i panTro5.chr20 T 41 C 0 s panPan2.chr20 62089377 10 + 62195757 gtgggatgcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477484 10 - 578057 GTGGGATGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003210 10 - 110113093 GTGGGATACC i nomLeu3.chr13 C 0 T 40 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=600.000000 s hg38.chr20_KI270870v1_alt 87250 1 + 183433 C s panTro5.chr20 66412519 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089387 1 + 62195757 c i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477494 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e nomLeu3.chr13 110003220 40 - 110113093 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=44503.000000 s hg38.chr20_KI270870v1_alt 87251 52 + 183433 TTCAACGTGGGAGCACTGAGCCGTTATTCGGTGGGATACCCTTCAACGTGGG s panTro5.chr20 66412520 52 + 66533130 TTCAACGTGGGAGCACTGAGCCGTTATTCGGTGGGATGCCCTTCAACGTGGG i panTro5.chr20 C 0 T 63 s panPan2.chr20 62089388 52 + 62195757 ttcaacgtgggAGCACTGAGCCGTTATTCGGTGAGATACCCTTCAACGTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477495 52 - 578057 CTCAACGTGGGAGCGCTGAGCTGTTATTTGGTGAGATACCCTTCAACGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003180 51 - 110113093 TTCAACGTGGGAGCACTGAGCCGTTATTCGGTGGGATA-CCTTCAACGTGGG i nomLeu3.chr13 T 40 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=9120.000000 s hg38.chr20_KI270870v1_alt 87303 19 + 183433 AGCACTGAGCCGTTATTCG s panPan2.chr20 62089440 19 + 62195757 AGCACTGAGCCGTTATTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477547 19 - 578057 AGCACTGAGCCGTTATTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003231 19 - 110113093 ATCGCTGAGCCGTTATTCG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66412572 63 + 66533130 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=33270.000000 s hg38.chr20_KI270870v1_alt 87322 41 + 183433 GTGAGATACCCTTCAACGTGGGAGCACTGAGCCGTTATTCG s panTro5.chr20 66412509 41 + 66533130 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCCGTTATTCG i panTro5.chr20 T 63 T 41 s panPan2.chr20 62089459 41 + 62195757 GTGGGATACCCTTCAACGTGGGAGCACTGAGCCGTTATTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477566 41 - 578057 GTGAGATACCCTTCAATGTGGGAGCACTGAGCGGTTATTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003250 40 - 110113093 GTGGGATA-CCTTCAACGTGGGAGCGCTGAGCCGTTATTCA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=33096.000000 s hg38.chr20_KI270870v1_alt 87363 41 + 183433 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCCGTTATTTG s panTro5.chr20 66412509 41 + 66533130 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCCGTTATTCG i panTro5.chr20 T 41 T 41 s panPan2.chr20 62089500 41 + 62195757 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCCGTTATTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477607 41 - 578057 GTGAGATGCCCTTCAACGTGGGAGCAGTGAGCAGTTATTCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003290 40 - 110113093 GTGGGATA-CCTTCAACGTGGGAGCACTGAGCTGTTATTCA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=26763.000000 s hg38.chr20_KI270870v1_alt 87404 29 + 183433 GTGGGATGCCCTTCAACGTGGGAGCACTG s panTro5.chr20 66412509 29 + 66533130 GTGGGATGCCCTTCAACGTGGGAGCACTG i panTro5.chr20 T 41 C 0 s panPan2.chr20 62089541 29 + 62195757 GTGGGATGCCCTTCAACGTGGGAGCGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477648 29 - 578057 GTGGGATGCCCTTCAACGTGGGAGCACTG i gorGor5.CYUI01015848v1 C 0 I 41 s nomLeu3.chr13 110003330 29 - 110113093 GTGGAATGCCCTTCAACGTGGGAGCGCTG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=30565.000000 s hg38.chr20_KI270870v1_alt 87433 34 + 183433 AGCCGTTATTCGGTGGGATACCCTTCAACGTGGG s panTro5.chr20 66412538 34 + 66533130 AGCCGTTATTCGGTGGGATGCCCTTCAACGTGGG i panTro5.chr20 C 0 T 63 s panPan2.chr20 62089570 34 + 62195757 AGCCGTTATTTGGTGGGATGCCCTTCAACGTGGG i panPan2.chr20 C 0 T 41 s gorGor5.CYUI01015848v1 477718 34 - 578057 AGCAGTTATTCGGTGGGATGCCCTTCAACGTGGG i gorGor5.CYUI01015848v1 I 41 C 0 s nomLeu3.chr13 110003359 34 - 110113093 AGCCGTTATTCGGTGGGATACCCTTCAACGTGGG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=3166.000000 s hg38.chr20_KI270870v1_alt 87467 7 + 183433 AGCACTA s panPan2.chr20 62089563 7 + 62195757 AGCGCTG i panPan2.chr20 T 41 C 0 s gorGor5.CYUI01015848v1 477752 7 - 578057 AGCACTG i gorGor5.CYUI01015848v1 C 0 T 82 s nomLeu3.chr13 110003393 7 - 110113093 AGCGCTG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66412572 63 + 66533130 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=6063.000000 s hg38.chr20_KI270870v1_alt 87474 12 + 183433 AGCCGTTATTCA s panPan2.chr20 62089570 12 + 62195757 AGCCGTTATTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477677 12 - 578057 AGCCGTTATTCA i gorGor5.CYUI01015848v1 T 82 C 0 s nomLeu3.chr13 110003400 12 - 110113093 AGCCGTTATTCA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66412572 63 + 66533130 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=18148.000000 s hg38.chr20_KI270870v1_alt 87486 22 + 183433 GTGGGATGCCCTTCAACGTGGG s panTro5.chr20 66412509 22 + 66533130 GTGGGATGCCCTTCAACGTGGG i panTro5.chr20 T 63 C 0 s panPan2.chr20 62089582 22 + 62195757 GTGGGATGCCCTTCAACGTGGG i panPan2.chr20 C 0 T 82 s gorGor5.CYUI01015848v1 477689 22 - 578057 GTGGGATGCCCTTCGACGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003412 21 - 110113093 GTGGGATA-CCTTCAACGTGGG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=36369.000000 s hg38.chr20_KI270870v1_alt 87508 41 + 183433 AGCACTGAGCCGTTATTCAGTGGGATACCCTTCAACGTGGG s panTro5.chr20 66412531 41 + 66533130 AGCACTGAGCCGTTATTCGGTGGGATGCCCTTCAACGTGGG i panTro5.chr20 C 0 T 41 s panPan2.chr20 62089522 41 + 62195757 AGCACTGAGCCGTTATTCGGTGGGATGCCCTTCAACGTGGG i panPan2.chr20 T 82 C 0 s gorGor5.CYUI01015848v1 477711 41 - 578057 AGCACTGAGCAGTTATTCGGTGGGATGCCCTTCAACGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003433 41 - 110113093 AGCACTGAGCTGTTATTCAGTGGAATGCCCTTCAACGTGGG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=34242.000000 s hg38.chr20_KI270870v1_alt 87549 41 + 183433 AGCACTGAGCCGTTATTCGGTGAGATACCCTTCAACGTGGG s panTro5.chr20 66412531 41 + 66533130 AGCACTGAGCCGTTATTCGGTGGGATGCCCTTCAACGTGGG i panTro5.chr20 T 41 T 63 s panPan2.chr20 62089563 41 + 62195757 AGCGCTGAGCCGTTATTTGGTGGGATGCCCTTCAACGTGGG i panPan2.chr20 C 0 T 41 s gorGor5.CYUI01015848v1 477752 41 - 578057 AGCACTGAGCCGTTATTTGGTGAGATGCCCTTCAACGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003474 40 - 110113093 AGCGCTGAGCCGTTATTCGGTGGGATA-CCTTCAACGTGGG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=19863.000000 s hg38.chr20_KI270870v1_alt 87590 41 + 183433 AGCACTGAGCCGTTATTCGGTGAGATACCCTTCAAGGTGGG s panPan2.chr20 62089563 41 + 62195757 AGCGCTGAGCCGTTATTTGGTGGGATGCCCTTCAACGTGGG i panPan2.chr20 T 41 T 82 s gorGor5.CYUI01015848v1 477793 41 - 578057 AGCACTGAGCGGTTATTTGGTGGGATGCCCTTCAACGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003514 41 - 110113093 AGCACTGAGCTGTTATTCAGTGGGATACCCTTCAACGTGGG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66412572 63 + 66533130 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=42957.000000 s hg38.chr20_KI270870v1_alt 87631 82 + 183433 AGCACTGAGCCGTTATTCAGTGGGATACCCTTCAACGTGGGAGCACTGAGCCGTTATTTGGTGAGATACCCTTCAAGGTGGG s panPan2.chr20 62089522 82 + 62195757 AGCACTGAGCCGTTATTCGGTGGGATGCCCTTCAACGTGGGAGCGCTGAGCCGTTATTTGGTGGGATGCCCTTCAACGTGGG i panPan2.chr20 T 82 T 153 s gorGor5.CYUI01015848v1 477834 82 - 578057 AGCACCGAGCCGTTATTCGGTGGGATGCCCTTCAACGTGGGAGCGCTGAGCCGTTATTTGGTGGGATGCCCTTCAACGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003555 82 - 110113093 AGCGCTGAGCCGTTATTCAGTGGGATACCCTTCAACGTGGGAGCGCTGAGCCGTTATTTGGGGGGATACCCTTCAACGTGGG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66412572 63 + 66533130 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=3165.000000 s hg38.chr20_KI270870v1_alt 87713 11 + 183433 AGCACTGAGCT s gorGor5.CYUI01015848v1 477916 11 - 578057 AGCACTGAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003637 11 - 110113093 AGCACTGAGCT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e panPan2.chr20 62089604 153 + 62195757 T e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66412572 63 + 66533130 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=4110.000000 s hg38.chr20_KI270870v1_alt 87724 8 + 183433 GTTATTCA s panPan2.chr20 62089451 8 + 62195757 GTTATTCA i panPan2.chr20 T 153 C 0 s gorGor5.CYUI01015848v1 477927 8 - 578057 GTTATTCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003648 8 - 110113093 GTTATTCA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e panTro5.chr20 66412572 63 + 66533130 T e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=36073.000000 s hg38.chr20_KI270870v1_alt 87732 41 + 183433 GTGGGATACCCTTCAACGTGGGAGCACTGAGCCGTTATTCG s panTro5.chr20 66412509 41 + 66533130 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCCGTTATTCG i panTro5.chr20 T 63 T 41 s panPan2.chr20 62089459 41 + 62195757 GTGGGATACCCTTCAACGTGGGAGCACTGAGCCGTTATTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477935 41 - 578057 GTGAGATACCCTTCAACGTGGGAGCACTGAGCTGTTATTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003656 41 - 110113093 GTGGAATGCCCTTCAACGTGGGAGCGCTGAGCCGTTATTCG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=34624.000000 s hg38.chr20_KI270870v1_alt 87773 41 + 183433 GTGAGATACCCTTCAACGTGGGAGCACTGAGCCATTATTCG s panTro5.chr20 66412509 41 + 66533130 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCCGTTATTCG i panTro5.chr20 T 41 T 41 s panPan2.chr20 62089500 41 + 62195757 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCCGTTATTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 477976 41 - 578057 GTGAGATGCCCTTCAACGTGGGAGCACTGAGCGGTTATTCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003697 41 - 110113093 GGGGGATACCCTTCAACGTGGGAGCGCTGAGCCGTTATTCA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=36139.000000 s hg38.chr20_KI270870v1_alt 87814 40 + 183433 GTGGGATGCCCTTCAACGTGGgagcactgagccgttattc s panTro5.chr20 66412509 40 + 66533130 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCCGTTATTC i panTro5.chr20 T 41 C 0 s panPan2.chr20 62089541 40 + 62195757 GTGGGATGCCCTTCAACGTGGGAGCGCTGAGCCGTTATTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478017 40 - 578057 GTGGGATGCCCTTCAACGTGGGAGCACTGAGCCATTATTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003738 40 - 110113093 GTGGGATACCCTTCAACGTGGgagcactgagccgttattc i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e colAng1.NW_012114444v1 5540196 4 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=21623.000000 s hg38.chr20_KI270870v1_alt 87854 17 + 183433 ggtgggatgcccttcaa s panTro5.chr20 66412549 17 + 66533130 GGTGGGATGCCCTTCAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089581 17 + 62195757 GGTGGGATGCCCTTCAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478057 17 - 578057 GGTGGGATGCCCTTCAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003778 17 - 110113093 agtggaatgcccttcaa i nomLeu3.chr13 C 0 I 1 s colAng1.NW_012114444v1 5540200 17 - 5823884 ggtggaatgcccttcgg i colAng1.NW_012114444v1 I 4 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=1000.000000 s hg38.chr20_KI270870v1_alt 87871 1 + 183433 c s panTro5.chr20 66412566 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089598 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478074 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s colAng1.NW_012114444v1 5540217 1 - 5823884 c i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e nomLeu3.chr13 110003795 1 - 110113093 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=7365.000000 s hg38.chr20_KI270870v1_alt 87872 5 + 183433 gtggg s panTro5.chr20 66412567 5 + 66533130 GTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089599 5 + 62195757 GTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478075 5 - 578057 GTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003796 5 - 110113093 gtggg i nomLeu3.chr13 I 1 C 0 s colAng1.NW_012114444v1 5540218 5 - 5823884 gtggg i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397062 0 + 96509753 C a score=30627.000000 s hg38.chr20_KI270870v1_alt 87877 17 + 183433 tttgtccagtgttgccc s panTro5.chr20 66412572 17 + 66533130 TTTGTCCAGTGTTGCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089604 17 + 62195757 TTTGTCCAGTGTTGCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478080 17 - 578057 TTTGTCCAGTGTTGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003801 17 - 110113093 tttgtccagtgttgcct i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96397062 17 + 96509753 tgtgtccagtgttgcct i macFas5.chr10 C 0 I 14 s colAng1.NW_012114444v1 5540223 17 - 5823884 tttgtccagcgttgccc i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e saiBol1.JH378156 16261186 25 + 16356641 I e macNem1.NW_012014244v1 16868073 31 - 16982598 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e calJac3.chrUn_GL286459 23797 25 + 372756 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=8574.000000 s hg38.chr20_KI270870v1_alt 87894 3 + 183433 gtg s panTro5.chr20 66412589 3 + 66533130 GTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089621 3 + 62195757 GTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478097 3 - 578057 GTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003818 3 - 110113093 GTG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96397093 3 + 96509753 gtt i macFas5.chr10 I 14 C 0 s macNem1.NW_012014244v1 16868104 3 - 16982598 GTG i macNem1.NW_012014244v1 I 31 C 0 s colAng1.NW_012114444v1 5540240 3 - 5823884 gtg i colAng1.NW_012114444v1 C 0 I 14 s calJac3.chrUn_GL286459 23822 3 + 372756 GTT i calJac3.chrUn_GL286459 I 25 C 0 s saiBol1.JH378156 16261211 3 + 16356641 gtt i saiBol1.JH378156 I 25 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3669605 34 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54421 34 - 179258 I e cebCap1.NW_016107870v1 1130183 133 + 1231380 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e rheMac8.chr10 92729078 40 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=1031849.000000 s hg38.chr20_KI270870v1_alt 87897 136 + 183433 atgcaggaacacctgagtgggaggttctcccttcacctgatgctgatttgtcccttaactcataatgttgacttggtcactggattagatggggcatcccagcacctctatgccagagggaaatgccagtcatttt s panTro5.chr20 66412592 136 + 66533130 ATGCAGGAACACCTGAGTGGGAGGTTCTCCCTTcacctgatgctgatttgtcccttaactcataatgttgacttggtcactggattagatggggcatcccggcacctctatgccagagggaaatgccagtcatttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089624 136 + 62195757 ATGCAGGAACACCTGAGTGGGAGGTTCTCCCTTcgcctgatgctgatttgtcccttaactcataatgttgacttggtcactggattagatggggcatcccggcacctctatgccagagggaaatgccagtcatttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478100 136 - 578057 ATGCAGGAACTCCCGAGTGGGAGGTTCTCCCTTcacctgatgctgatttgtcccttaactcataatgttgacttggtcactggattagatggggcatcccggcacctctatgccagagggaaatgccagtcatttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110003821 136 - 110113093 ATGCAGGAACACCCGAGTGGGAGGTTCTCCCTTCACCTGACGCTGATTTGTCCCTTAACTCATAATGTTGACTTGGTCACTGGATTTGATGGGGCATCCCGGCACCTCTATGCCAGAGGGAAATGCCAGTCATTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92729118 136 - 92844088 atgcagggacacccgagtgggaggttctcccttcgcctgacgctcacttgtccctgaactaataatgttgacttggtcactggattcgctggggcatcccggcacctctatgccagagggaaatgccagtcatttt i rheMac8.chr10 I 40 C 0 s macFas5.chr10 96397096 136 + 96509753 atgcagggacacccgagtgggaggttctcccttcgcctgacgctcacttgtccctgaactaataatgttgacttggtcactggattcgctggggcatcccggcacctctatgccagagggaaatgccagtcatttt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16868107 136 - 16982598 ATGCAGGGACACCCGAGTGGGAGGGTCTCCCTTcgcctgacgctcacttgtccctgaactaataatgttgacttggtcactggattcgctggggcatcccggcacctctatgccagagggaaatgccagtcatttt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669639 136 - 3785965 atgcagggacacccgagtgggaggttctcccttcgcctgacgctgacttgtccctgaactaataatgttgacttggtcactggattcgctggggcatcccggcacctctatgccagagggaaatgccagtcatttt i cerAty1.NW_012001373v1 I 34 C 0 s manLeu1.NW_012101652v1 54455 136 - 179258 atgcagggacacccgagtgggaggttctcccttcgcctgacgctgacttgtccctgaactaataatgttgacttggtcactggattcgctggggcatcccggcacctctatgccagagggaaatgccggtcatttt i manLeu1.NW_012101652v1 I 34 C 0 s colAng1.NW_012114444v1 5540257 136 - 5823884 atgcagggacacccgagtgggaggttctcccttcgcctgacgctgatttgtccctgaactaatgatgttgacttggtcactggagtcgctggggcatcccggcacctctatgccggagggaaatgccagtcatttt i colAng1.NW_012114444v1 I 14 C 0 s calJac3.chrUn_GL286459 23825 136 + 372756 ATGCAGGAACACCCAAGTATGAACTTCTTTCTTCACCTGCCCCTgatttgttccttaactgatgatgctgacttggtcactggattagatggggcatcctggcacccctatgccaaagggaaatgccagtcatttt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261214 136 + 16356641 atgcaggaacacccaagtgtgagcttctcccttcacctgaccctgatttgtcccttaactgataatgctggcttggtcactggattagatggggcatcctggcacctctatgccaaagagaaatgccagtcatttt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1130316 136 + 1231380 atgcaggaacgcccaggtgtgagcttctcccttcacctgaccctgatttgtcccttaactgataatgttgacttggtcactggattagatggggcatcctggcacctctgtgccaaagggaaatgccagtcatttt i cebCap1.NW_016107870v1 I 133 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=1313962.000000 s hg38.chr20_KI270870v1_alt 88033 233 + 183433 ccctttgcaattaataaatatttggggggaaggtactttgaaactatggaaat-atctccatcctcaacaaaccatcactt-aactttGATGGatatctctatagactcgttgtttcctgttttaccccatgggctgaaagccttctttggatgctcagattgtccctgattgaccagtggaagcccagtacagaggctcctgcagcctCGGTCCAGCTCCCCTGTCCTTTCTTG s panTro5.chr20 66412728 233 + 66533130 ccctttgcaattaataaatatttggggggaaggtactttgaaactatggaaat-atctccatcctcaacaaaccatcactt-aattttgatggatatctctatagactcattgtttcctgttttatcccatgggctgaaagccttcttttgatgctcagattgtccctgattgaccagtggaagcccagtacagaggctcctgtagcctCGGTCCAGCTCCCCTGTCCTTTCTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089760 233 + 62195757 ccctttgcaattaataaatatttggggggaaggtactttgaaactatggaaat-atctccatcctcaacaaaccatcactt-aactttgatggatatctctatagactcattgtttcctgttttatcccatgggctaaaagccttcttttgatgctcagattgtccctgattgaccagtggaagcgcagtacagaggctcctgtagcctCGGTCCAGCTCCCCTGTCCTTTCTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478236 233 - 578057 ccctttgcaattaataaatatttgaggggaaggtactttgaaactatggaaat-atctccatcctcaacaaaccatcactt-aattttgatggatatctctatagactcattgtttcctgttttatcccatgggctaaaagccttattttgatgctcagattgtccctgattgaccagtggaagcccagtacagaggctcccgtagcctCGGTCCAGCTCCACTGTCCTTTCTTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92729254 221 - 92844088 ccctttgcaattcataaatatctggggggaaggtactttgaaactctggaaat-atctccatcctcaacaaaccatcacTT-GATTTTGATGAATGTCTCTATAGACTCATTATTTCCTGTTTTATCCCACGGGCT-AAAGCCTTCTTGTGATGCTCAGATTGTCCCTGATTGAC-----------CAGTACAGAGGCTTCCATAGCCTCAGTTCAGCTCCACTGTCCTTCCTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96397232 221 + 96509753 ccctttgcaattcataaatatctggggggaaggtactttgaaactctggaaat-atctccatcctcaacaaaccatcacTT-GATTTTGATGAAGGTCTCTATAGACTCATTATTTCCTGTTTTATCCCACGGGCT-AAAGCCTTCTTGTGATGCTCAGATTGTCCCTGATTGAC-----------CAGTACAGAGGCTTCCATAGCCTCAGTTCAGCTCCACTGTCCTTCCTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16868243 221 - 16982598 ccctttgcaattcataaatatctggggggaaggtactttgaaactctggaaat-atctccatcctcaacaaaccatcacTT-GATTTTGATGAATGTCTCTATAGACTCATTATTTCCTGTTTTATCCCACGGGCT-AAAGCCTTCTTGTGATGCTCAGATTGTCCCTGATTGAC-----------CAGTACAGAGGCTTCCATAGCCTCAGTTCAGCCCCACTGTCCTTCCTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3669775 232 - 3785965 ccctttgcaattcataaatatctggggggaaggtactttgaaactctggaaat-atctccatcctcaacaaaccatcacTT-GATTTTGATGAatgtctctatagactcattatttcctgttttatcccacgggct-aaagccttcttgtgatgctcagattgtccctgattgaccagtggaagctcAGTGCAGAGGCTTCCATGGCCTCAGTCCAGCTCCACTGTCCTTCCTTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54591 233 - 179258 ccctttgcaattcataaatatctggggggaaggtactttgaaactctggaaataatgtccatcctcaaCAAACCATCACTT-GATTTTGATGAGTGTCTCtatagactcattatttcctgttttatcccacgggct-aaagccttcttgtgatgctcagattgtccctgattgaccagtggaagctcAGTACAGAGGCTTCCATGGCCTCAGTCCAGCTCCACTGTCCTTCCTTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540393 233 - 5823884 ccctttgcagttcataaatatttggggggaaggtactttgaaactctggaaat-acctccatcctcaacaaaccatcacttaaattttGATGAATGTCTCTACAGACTCATTATTTCCTGTTTTATCCCATGGGCT-AAAGCCttcttttgatgctcagattgtccctgattgaccagtggaagctcAGGACAGAGGCTTCCATAGCCTCAGTCCAGCTCCACTGTCCTTCCTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 23961 222 + 372756 ccctttgcaattaatacatatttggggggaagtttctttgaaactgtggacat-atctccatcctcaacaaaccatcactt-aattttCACGGCTATCTTTATAGACTGATTATTTCCTGTTTTCTCCAACGGGCTGAAAGCCTT----------TCAGATTG-CCCCGACTGGCCAGCGGGAACTCAGTGCAGAGGCTCCCCTAGCCTCAGCACAACACCACTGCTTTTTCTTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261350 232 + 16356641 ccctttgcaattaatacatatttggggggaagtttctttgaaactgtggaaat-atctccatcctcaacaaactatcactt-attTTTCGCGGATCTCTCTGCAGACTCATTATTTCCCGTTTTCTCCAACGGGCTGAAAGCCCTGTTCTGAGGCTCAGATCT-CCCCGACTGGCCAGTGGAGGCTCAGTGCAGAGGCTCGTCGAGCCTCAGCGCAACACCACTGCTTTTTCTTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1130452 232 + 1231380 ccctttgcaattaatacatatttggggggaagtttctttgaaactgtagaaat-atctccatccgcaacaaaccatcactt-aattttcacaGATCTCTCTACAGACTCATTGTTTCCTGTTTTCTCCAGCGGGCTGAAAGCCTTGTTCTGACACTCAGATTG-CCCCGACTGGCCAGCGGGAGCTCAGTGCAGAGGCTCACTGAGCCTCAGCACACCACCACTGTGTTTTCTTG i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e aotNan1.NW_018500483v1 2658658 406 + 11732439 I e nomLeu3.chr13 110003957 0 - 110113093 C e otoGar3.GL873542 22823864 2393 + 22939663 I a score=836019.000000 s hg38.chr20_KI270870v1_alt 88266 113 + 183433 TTCTTGCCTTTCCTGCTTGGGGCCTggaactctggttccttttattagaaaatggtg-ttagcctgagacctgggtgttgggCCTCTAGTGGACATGGCTGGGAAGACGTATGT s panTro5.chr20 66412961 113 + 66533130 TTCTTGCCTTTCCTGCTTGGGGCCTggaactctggttccttttattagaaaatggtg-ttagcctgagacctgggtgttgggCCTCTAGTGGACACGGCTGGGAAGACGTATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62089993 113 + 62195757 TTCTTGCCTTTCCTGCTTGGGGCCTggaactctggttccttttattaaaaaatggtg-ttagcctgagacctgggtgttgggCCTCTAGTGGACACGGCTGGGAAGACGTATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478469 113 - 578057 TTCTTGCCTTTCCTGCTTGGGGCCTggaactctggttccttttattagaaaatggtg-ttagcctgagacctgggtgttgggCCTGTAGTGGACACAGCTGGGAGGACGTATGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92729475 114 - 92844088 TTCTTGCCTTTCTTGCTTGGGGCCTggaactcgggttccttttattagaaaatggtgcttagcctgagacctgggtgttGTGCCTCTAGTGGACACGGCTGGGAAGACGCATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96397453 114 + 96509753 TTCTTGCCTTTCTTGCTTGGGGCCTggaactcgggttccttttattagaaaatggtgcttagcctgagacctgggtgttGTGCCTCTAGTGGACACGGCTGGGAAGACGCATGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16868464 114 - 16982598 TTCTTGCCTTTCTTGCTTGGGGCCTggaactcgggttccttttattagaaaatggtgcttagcctgagacctgggtgttGTGCCTCTAGTGGACACGGCTGGGAAGACGCATGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3670007 114 - 3785965 TTCTTGCTTTTCCTGCTTGGGGCCTggaactcgggttccttttattagaaaatggtgcttagcctgagacctgggtgttGTGCCTGTAGTGGACACGGCTGGGAAGACGCATGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54824 114 - 179258 TTCTTGCCTTTCTTGCTTGGGGCCTggaactcgggttccttttattagaaaatggtgcttagcctgagacctgggtgttGTGCCTCTAGTGGACACGGCTGGGAAGACGCATGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540626 114 - 5823884 TTCTTGCCTTTCTTGCTTGGGGCCTggaactctggttccttttattagaaagtggtgcttagcctgagacctgggtgttGTGCCTCTAGTGGACACGGCTGGGAAGATGCACGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 24183 113 + 372756 TTCTTGCCTTTTCTGCTTGGGGCCTggaactctggttccttcgattagaaaatggtggttagcctgagacctgggtgttgggcctcgagtggacagggct-ggaagatgtgtgt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261582 113 + 16356641 TTCTTGCCTTTTCTGCTTGGGGCCTGGAACTCTGGTTCCTTTGATCAGAAAATGGTGGTTAGCCTGAGACCTGGGTGTTGGGCCTCAagtggacagggctgggaagattcgtg- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1130684 113 + 1231380 TTCTTGCCTTTTCTGCTTGGGGCCTGGAACTCTGATTCCTTTGATTAGAAAA-GGTGGTTAGCCTGAGACCTGGGTGTTGGGCCTCGAGGGgacagggctgggaagacgtgtgt i cebCap1.NW_016107870v1 C 0 I 68 s aotNan1.NW_018500483v1 2659064 113 + 11732439 TTCTTGCCTTTTCTGCTTGGGGCCTGGAACTCTGGTTCCTTTGATTAGAAAACGGTGGTTAGCCTGAGACCTGGGTGTT-GGCCTCGAGGGGACAGGGCTGGGAAGACGCGTGT i aotNan1.NW_018500483v1 I 406 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e nomLeu3.chr13 110003957 0 - 110113093 C e otoGar3.GL873542 22823864 2393 + 22939663 I a score=6600.000000 s hg38.chr20_KI270870v1_alt 88379 1 + 183433 G s panTro5.chr20 66413074 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090106 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478582 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92729589 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96397567 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16868578 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3670121 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54938 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540740 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 24296 1 + 372756 g i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2659177 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e saiBol1.JH378156 16261695 0 + 16356641 C e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e nomLeu3.chr13 110003957 0 - 110113093 C e otoGar3.GL873542 22823864 2393 + 22939663 I a score=61711.000000 s hg38.chr20_KI270870v1_alt 88380 13 + 183433 TGTacacacacat s panTro5.chr20 66413075 11 + 66533130 TGTACACACA--T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090107 13 + 62195757 TGTAGacacacat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478583 13 - 578057 TGTacacacacat i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92729590 13 - 92844088 TGTacacacacat i rheMac8.chr10 C 0 I 32 s macFas5.chr10 96397568 13 + 96509753 TATacacacacat i macFas5.chr10 C 0 I 32 s macNem1.NW_012014244v1 16868579 13 - 16982598 TGTacacacacat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3670122 13 - 3785965 TGTacacacacat i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54939 13 - 179258 TGTacacacacat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540741 13 - 5823884 TGTacacacacat i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16261695 13 + 16356641 ttcacacacacac i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2659178 13 + 11732439 GGcacacacacat i aotNan1.NW_018500483v1 C 0 I 1866 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e nomLeu3.chr13 110003957 0 - 110113093 C e otoGar3.GL873542 22823864 2393 + 22939663 I a score=4011.000000 s hg38.chr20_KI270870v1_alt 88393 2 + 183433 ac s panTro5.chr20 66413086 2 + 66533130 AC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090120 2 + 62195757 ac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478596 2 - 578057 ac i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92729635 2 - 92844088 ac i rheMac8.chr10 I 32 C 0 s macFas5.chr10 96397613 2 + 96509753 ac i macFas5.chr10 I 32 C 0 s saiBol1.JH378156 16261708 2 + 16356641 ac i saiBol1.JH378156 C 0 I 3 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3670135 0 - 3785965 C e colAng1.NW_012114444v1 5540754 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 54952 0 - 179258 C e macNem1.NW_012014244v1 16868592 0 - 16982598 C e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e nomLeu3.chr13 110003957 0 - 110113093 C e otoGar3.GL873542 22823864 2393 + 22939663 I a score=11278.000000 s hg38.chr20_KI270870v1_alt 88395 5 + 183433 tcaca s panTro5.chr20 66413088 5 + 66533130 TCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090122 5 + 62195757 tcaca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478598 5 - 578057 tgaca i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92729637 5 - 92844088 acaca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96397615 5 + 96509753 acaca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16868592 3 - 16982598 --aca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3670135 3 - 3785965 --aca i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54952 3 - 179258 --aca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540754 3 - 5823884 --aca i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e nomLeu3.chr13 110003957 0 - 110113093 C e otoGar3.GL873542 22823864 2393 + 22939663 I a score=196116.000000 s hg38.chr20_KI270870v1_alt 88400 69 + 183433 tgctacacacagttacacaatgctacac---acacacagttacacacacatactacaca----------caggctacacaca s panTro5.chr20 66413093 45 + 66533130 TGCtacacacagttacaca---------------------------cagatactacaca----------caggctacacaca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090127 69 + 62195757 tgctacacacagttacacaatgctacac---acacacagttacacacacatactacaca----------caggctacacaca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 478603 69 - 578057 tgctacacacagttacacaatgctacac---acacacagttacgcacacacgctacaca----------cacgctacacaca i gorGor5.CYUI01015848v1 C 0 I 594 s nomLeu3.chr13 110003957 64 - 110113093 Tgctacacacagttacaca----cacacgctacacacagttacacacacacgccacaca--------------ctacacaca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92729642 64 - 92844088 tgctacacacagttacaca------cacgccacacacagttacacacacatgctacacg------------cactacacaca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96397620 68 + 96509753 tgctacacacagttacaca------cacgccacacacagttacacacacatgctacacg--------cacacactacacaca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16868595 68 - 16982598 tgctacacacagttacaca------cacgccacacacagttacacacacatgctacacg--------cacacactacacaca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3670138 64 - 3785965 tgctacacacagttacaca------cacgccacacacagtt----acacatgctacacg--------cacacactacacaca i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 54955 64 - 179258 tgctacacacagttacaca------cccgccacacacagtt----acacatgctacacg--------cacacactacacaca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540757 68 - 5823884 tgctacacacagttacaca------ca---tacatgctat-----acacacgctacacacagttacacacacgccacacaca i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=39247.000000 s hg38.chr20_KI270870v1_alt 88469 11 + 183433 gttacacacac s panTro5.chr20 66413138 11 + 66533130 gttacacacaC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090196 11 + 62195757 gttacacacac i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110004021 11 - 110113093 gttacacacat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92729706 11 - 92844088 gttacatacat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96397688 11 + 96509753 gttacatacat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16868663 11 - 16982598 gttacatacat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3670202 11 - 3785965 gttacatacat i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 55019 11 - 179258 gttacatacat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5540825 11 - 5823884 gttatacacac i colAng1.NW_012114444v1 C 0 I 16 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e gorGor5.CYUI01015848v1 478672 594 - 578057 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=24685.000000 s hg38.chr20_KI270870v1_alt 88480 8 + 183433 gctacaca s panTro5.chr20 66413149 8 + 66533130 GCTACACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090207 8 + 62195757 actacaca i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110004032 8 - 110113093 accacaca i nomLeu3.chr13 C 0 I 1 s rheMac8.chr10 92729717 8 - 92844088 gctacaca i rheMac8.chr10 C 0 I 24 s macFas5.chr10 96397699 8 + 96509753 gctacaca i macFas5.chr10 C 0 I 13 s macNem1.NW_012014244v1 16868674 8 - 16982598 gctacaca i macNem1.NW_012014244v1 C 0 I 13 s cerAty1.NW_012001373v1 3670213 8 - 3785965 gctacaca i cerAty1.NW_012001373v1 C 0 I 13 s manLeu1.NW_012101652v1 55030 8 - 179258 gctacaca i manLeu1.NW_012101652v1 C 0 I 13 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e colAng1.NW_012114444v1 5540836 16 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e gorGor5.CYUI01015848v1 478672 594 - 578057 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=15482.000000 s hg38.chr20_KI270870v1_alt 88488 12 + 183433 gttacatgcatg s panTro5.chr20 66413157 12 + 66533130 GTTACATGCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090215 12 + 62195757 gttacatgcatg i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110004041 12 - 110113093 gctgcacacaca i nomLeu3.chr13 I 1 C 0 s macFas5.chr10 96397720 11 + 96509753 gttacaca-atg i macFas5.chr10 I 13 C 0 s macNem1.NW_012014244v1 16868695 11 - 16982598 gttacaca-atg i macNem1.NW_012014244v1 I 13 C 0 s cerAty1.NW_012001373v1 3670234 11 - 3785965 gttacaca-atg i cerAty1.NW_012001373v1 I 13 C 0 s manLeu1.NW_012101652v1 55051 11 - 179258 gttacaca-atg i manLeu1.NW_012101652v1 I 13 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e colAng1.NW_012114444v1 5540836 16 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e gorGor5.CYUI01015848v1 478672 594 - 578057 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e rheMac8.chr10 92729725 24 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=-174.000000 s hg38.chr20_KI270870v1_alt 88500 2 + 183433 ct s panTro5.chr20 66413169 2 + 66533130 CT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090227 2 + 62195757 ct i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110004053 1 - 110113093 c- i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012114444v1 5540852 2 - 5823884 ct i colAng1.NW_012114444v1 I 16 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3670245 0 - 3785965 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e gorGor5.CYUI01015848v1 478672 594 - 578057 I e manLeu1.NW_012101652v1 55062 0 - 179258 C e saiBol1.JH378156 16261710 3 + 16356641 I e macNem1.NW_012014244v1 16868706 0 - 16982598 C e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e rheMac8.chr10 92729725 24 - 92844088 I e otoGar3.GL873542 22823864 2393 + 22939663 I e macFas5.chr10 96397731 0 + 96509753 C a score=97180.000000 s hg38.chr20_KI270870v1_alt 88502 40 + 183433 ctatacagttatacac--acat-----------------------gctacacacaca--gttaca----ca s panTro5.chr20 66413171 46 + 66533130 CTATACAATTATacac--acat-----------------------gctacacacacacagttacagacaca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090229 42 + 62195757 ctatacagttatacac--acat-----------------------gctacacaca----gttacacacaca i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110004054 25 - 110113093 -----------tacac--acat-----------------------gctacacaca----gtta------ca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92729749 40 - 92844088 ctatacagttatgcac--acat-----------------------gccacacacaca--gttaca----ca i rheMac8.chr10 I 24 I 5 s macFas5.chr10 96397731 40 + 96509753 ctatacagttgtgcac--acat-----------------------gccacacacaca--gttaca----ca i macFas5.chr10 C 0 I 5 s macNem1.NW_012014244v1 16868706 63 - 16982598 ctctacagttgtgcac--acatgccacacacacagttacacacacgccacacacaca--gttaca----ca i macNem1.NW_012014244v1 C 0 I 5 s cerAty1.NW_012001373v1 3670245 40 - 3785965 ctatacagttatgcac--acat-----------------------gccacacacaca--gttaca----ca i cerAty1.NW_012001373v1 C 0 I 676 s manLeu1.NW_012101652v1 55062 40 - 179258 ctatacagttatgcac--acat-----------------------gccacacacaca--gttaca----ca i manLeu1.NW_012101652v1 C 0 I 656 s colAng1.NW_012114444v1 5540854 41 - 5823884 acacacagttacacacatacat-----------------------gctacacacac---gctaca----ca i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e gorGor5.CYUI01015848v1 478672 594 - 578057 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=76325.000000 s hg38.chr20_KI270870v1_alt 88542 59 + 183433 tttgcacacagttacacactcacatgct--acacacagttacacacat------acgccacacac---gc s panTro5.chr20 66413217 61 + 66533130 tttgcacacagttacacactcacatgct--acacacagttacacacat------acgccacacaca-tgc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090271 59 + 62195757 tttgcacacagttacacactcacatgct--acacacagttacacacat------acgccacacac---gc i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110004079 62 - 110113093 gttacacacagttacagttacacatgct--acacacaccattacacac------acaccacacacagtta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92729794 65 - 92844088 cacacacacagttacaca--cacatgctagacacacagttacacatgccacacaacactacacac---ac i rheMac8.chr10 I 5 I 2 s macFas5.chr10 96397776 65 + 96509753 cacacacacagttacaca--cacatgctagacacacagttacacatgccacacaacactacacac---ac i macFas5.chr10 I 5 I 2 s macNem1.NW_012014244v1 16868774 65 - 16982598 cacacacacagttacaca--cacatgctagacacacagttacacatgccacacaacactacacac---ac i macNem1.NW_012014244v1 I 5 I 2 s colAng1.NW_012114444v1 5540895 46 - 5823884 --------cagttacaca-----atggt--atacacagttacgcacac------atgccacacac---ac i colAng1.NW_012114444v1 C 0 I 38 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3670285 676 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e gorGor5.CYUI01015848v1 478672 594 - 578057 I e manLeu1.NW_012101652v1 55102 656 - 179258 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=31516.000000 s hg38.chr20_KI270870v1_alt 88601 37 + 183433 tacacacatgctacatgca--gtta----catgccacac-------------------a-gtc----- s panTro5.chr20 66413278 37 + 66533130 tacacacatgctacacgca--gtta----catgctacac-------------------a-gtc----- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090330 37 + 62195757 tacacacatgctacatgca--gtta----catgctacgc-------------------a-gtc----- i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110004141 43 - 110113093 cacacacatgctacacacagggttacat-catgctacac-------------------atgct----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92729861 44 - 92844088 tacacacacgctaca--ca--gttacacacatgctacac-------------------a-cacactac i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96397843 44 + 96509753 tacacacacgctaca--ca--gttacacacatgctacac-------------------a-cacactac i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16868841 63 - 16982598 tacacacacgctaca--ca--gttacacacatgctacacactacacagctacgcacata-catgctac i macNem1.NW_012014244v1 I 2 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3670285 676 - 3785965 I e colAng1.NW_012114444v1 5540941 38 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e gorGor5.CYUI01015848v1 478672 594 - 578057 I e manLeu1.NW_012101652v1 55102 656 - 179258 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=111886.000000 s hg38.chr20_KI270870v1_alt 88638 115 + 183433 acacacagttacaca--------------------------------ccacacgcagttacac--acacatgctacacacaggtacatgctacacaca--cgctacacacagt-------tatacatgctacacacacgctacac----acaGTT----ACATGCT s panTro5.chr20 66413315 134 + 66533130 acacacagttacacatg------ctacac-------acagttacacaccacacgcagttacac--acaaatgctacacacaggtacatgctacacaca--cgctacacacagt-------tatacatgctacacacaagctacac----acagtt----acaTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090367 77 + 62195757 acacacagttacaca------------------------------------------------------------------------tgctacacaca--cgctacacacagt-------tatacatgctacacacatgctacac----acaGTT----ACATGCT i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110004184 119 - 110113093 atgcatagttacaca----------------------------catgctacacacagttacac------atgcttcacac-------ggctacacaca--tgtgacacacagttacacgctacacatgctgcgcacacgctacacagttacacac----acatgct i nomLeu3.chr13 C 0 I 9 s rheMac8.chr10 92729905 153 - 92844088 acacacagctacgcacatacatgctacacacatgctacacacacactacacacacagttacgcacatacatgctacagaca------tgctacacaca--ctacacacacagttacgca-catacatgctacacacatgctacac----acggttacacacatgct i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96397887 153 + 96509753 acacacagctacgcacatacatgctacacacatgctacacacacactacacacacagttacgcacatacatgctacacaca------tgctacacaca--ctacacacacagttacgca-catacatgctacacacatgctacac----acggttacacacatgct i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16868904 122 - 16982598 acacat-gctacacaca------ctacac----------------------acacagttacgcacatacatgctacacaca--------ctacacaca--ctacacacacagttacgca-catacatgctacacacatgctacac----acggttacacacatgct i macNem1.NW_012014244v1 C 0 I 2 s colAng1.NW_012114444v1 5540979 130 - 5823884 acacacggttacacatg------ccacaca-acgctacacacacactacacacatgct-------acacgtgctacacaca-------gttacacacatgctacacacaca-ctacaca-caca---gttacgcacat-ccatac---------tacgcacatact i colAng1.NW_012114444v1 I 38 I 2 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3670285 676 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e gorGor5.CYUI01015848v1 478672 594 - 578057 I e manLeu1.NW_012101652v1 55102 656 - 179258 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=64369.000000 s hg38.chr20_KI270870v1_alt 88753 34 + 183433 ACACAGTTACATGCATGC--TCTATACAGTTATACa s panTro5.chr20 66413449 34 + 66533130 ACACAGTTACAGGCATGC--TCTATACAGTTATACa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090444 34 + 62195757 ACACAGTTACATGCATGC--TCTATACAGTTATACa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 479266 34 - 578057 acacaGTTACGTGCATGC--TCTATACAGTTATACA i gorGor5.CYUI01015848v1 I 594 C 0 s nomLeu3.chr13 110004312 30 - 110113093 acacagttaca--catgc--tacacacagt--taca i nomLeu3.chr13 I 9 C 0 s rheMac8.chr10 92730060 36 - 92844088 acacaattacacacatgccacacacacagttacaca i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96398042 36 + 96509753 acacaattacacacacgccacacacacagttacaca i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16869028 32 - 16982598 acacaatt----acacggcacacacacagttacaca i macNem1.NW_012014244v1 I 2 C 0 s colAng1.NW_012114444v1 5541111 34 - 5823884 acacggttacacacatgc--tatacacagttacaca i colAng1.NW_012114444v1 I 2 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3670285 676 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 55102 656 - 179258 I e saiBol1.JH378156 16261710 3 + 16356641 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=30285.000000 s hg38.chr20_KI270870v1_alt 88787 7 + 183433 cacatgc s panTro5.chr20 66413483 7 + 66533130 cacatgc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090478 7 + 62195757 cacatgc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 479300 7 - 578057 CACATGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110004342 7 - 110113093 cacaTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92730096 7 - 92844088 cacaTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96398078 7 + 96509753 cacaTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16869060 7 - 16982598 cacaTGC i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5541145 7 - 5823884 cacatgc i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16261713 7 + 16356641 cacatgc i saiBol1.JH378156 I 3 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3670285 676 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 55102 656 - 179258 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24297 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=22915.000000 s hg38.chr20_KI270870v1_alt 88794 19 + 183433 tacac---------------acacacagttacag s panTro5.chr20 66413490 19 + 66533130 tacac---------------acacacagttacag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090485 19 + 62195757 tacac---------------acatgcagttacag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 479307 19 - 578057 TACAC---------------ACACACCGTtacag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110004349 14 - 110113093 TAT--------------------tatagttacac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92730103 34 - 92844088 TTCATGCACAGTTACATGCtacacacagttacac i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96398085 34 + 96509753 TTCATGCACAGTtacatgctacacacagttacac i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16869067 34 - 16982598 TTCATGCACAGTtacatgttacacacagttacac i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5541152 17 - 5823884 cac-----------------acacacaGTtacac i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 24297 15 + 372756 tgcac---------------acacatggtt---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261720 15 + 16356641 tgcac---------------acacacagtg---- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e canFam3.chr24 47586606 487 + 47698779 I e cerAty1.NW_012001373v1 3670285 676 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 55102 656 - 179258 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=14477.000000 s hg38.chr20_KI270870v1_alt 88813 9 + 183433 acacacgcc--- s panTro5.chr20 66413509 9 + 66533130 acacacgcc--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090504 9 + 62195757 acacacgcc--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 479326 8 - 578057 acacacgc---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110004363 9 - 110113093 acacacgct--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92730137 8 - 92844088 acaca-gct--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96398119 8 + 96509753 acaca-gct--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16869101 8 - 16982598 acaca-gct--- i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5541169 9 - 5823884 acacatgct--- i colAng1.NW_012114444v1 C 0 C 0 s canFam3.chr24 47587093 12 + 47698779 ACACACGCAGAC i canFam3.chr24 I 487 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e cerAty1.NW_012001373v1 3670285 676 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 55102 656 - 179258 I e saiBol1.JH378156 16261735 0 + 16356641 C e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e calJac3.chrUn_GL286459 24312 0 + 372756 C e aotNan1.NW_018500483v1 2659191 1866 + 11732439 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=182570.000000 s hg38.chr20_KI270870v1_alt 88822 36 + 183433 acacacacaccctttttcacctaggtctgta--tttac s panTro5.chr20 66413518 36 + 66533130 acacacacaccctttttcacctaggtctgta--tttac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090513 36 + 62195757 acacacacaccctttttcacctaggtctgta--tttac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 479334 35 - 578057 -tacacacaccctttttcacctaggtctgta--tttac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110004372 36 - 110113093 acacacacgccctttttcacctaggtctgta--tttac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92730145 36 - 92844088 acacacacaccctttttcacctaggtctgta--tttac i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96398127 36 + 96509753 acacacacaccctttttcacctaggtctgta--tttac i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16869109 36 - 16982598 acacacacaccctttttcacctaggtctgta--tttac i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5541178 32 - 5823884 acacacacaccctttttcacctaggtctgta--t---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 24312 31 + 372756 acacacacgctccttttcacccaggtctgta------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261735 31 + 16356641 acacacacactccttttcgcccagctctgta------- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2661057 33 + 11732439 acacacacactccttttcacccaggtctgtatt----- i aotNan1.NW_018500483v1 I 1866 C 0 s canFam3.chr24 47587105 35 + 47698779 ACACGCATGCCCACTTGCACCT-GGTCTGTA--TTTAT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e cerAty1.NW_012001373v1 3670285 676 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 55102 656 - 179258 I e cebCap1.NW_016107870v1 1130797 68 + 1231380 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=661790.000000 s hg38.chr20_KI270870v1_alt 88858 112 + 183433 ttctccatctatcgatgtttattgaaaaacacaagttcatattgataacctctgattccaattcccacacagggttcattctaaggttctgcctttccgtaggcataacgtc s panTro5.chr20 66413554 112 + 66533130 ttctccatctatcgatgtttattgaaaaacacaagttcatattgataacctctgattccaattcccacacagggttcattctaaggttctgcctttccgtaggcataacgtc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090549 112 + 62195757 ttctccatctatcgatgtttattgaaaaacacaagttcatattgataacctctgattccaattcccacacagggttcattctaaggttctgcctttccgtaggcataacgtc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 479369 111 - 578057 ttctccatctatcgatgtttattgaaaaacacaagttcatattgataacctctgattccagttcccaca-agggttcattctaaggttctgcctttccgtagccataacgtc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110004408 112 - 110113093 ttctccatctatcgatgtacattgaaaaacacaagttcacattgataacctctgattccaattcccacacggggttcattctaaagtcctgcctttccgtaggcataacttg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92730181 112 - 92844088 ttctccatctatcgatgtatattgaaaaacacaagttcgcattgatcacctctgattccagttcccacacagggatcgctctgaagttctgccttcccgcaggcatgacttg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96398163 112 + 96509753 ttctccatctatcgatgtatattgaaaaacacaagttcgcattgatcacctctgattccagttcccacacagggttcgctctgaagttctgcctttccacaggcataacttg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16869145 112 - 16982598 ttctccatctatcgatgtatattgaaaaacacaagttcgcattgatcacctctgattccagttcccacacagggttcgctctgaagatctgcctttccacaggcataacttg i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5541210 112 - 5823884 ttctccatctatcgatgtatgttgaaaaacaacagttcgcgttgataaccgctgattccagttcccacacagcgttcattccgaagttctgcctttccacaggcatagcttg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 24343 112 + 372756 ttctctatctaccgatgtatatcgcaaaacacaagttcactttgacagtttctgattccaattcccacacagggttcactccagagctctgcctttccataggcataactta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261766 112 + 16356641 ttctccatctaccgatgtatattgcaaaacacaagttcacattgacagtctctgattccaattcccacacagggttcactccagagttctgcctttccgtaggcatgacttg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1130865 112 + 1231380 ttctccatctaccgatgtatattgcaaaacacaagtccacactgacagtctctgattccaattcccacacagggttcactccagagttctgcctttccataggcatgacttg i cebCap1.NW_016107870v1 I 68 C 0 s aotNan1.NW_018500483v1 2661090 110 + 11732439 --ctccatctgccgatgtatattgcaaatcacaaattcacattgacagtctctgattccagttcccacacagagttcactccagagtcctgccttcccataggcataacttg i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47587140 105 + 47698779 TTCTCCATTT-CCTCTGGATATAGGCAGCCACAGGTG-GCACAGGT-ACCTGCAATACCCGTCCCC-CAGGGCGCGCGTGCTAGGCCTCTGCCTTTCTCCGTGTGCGCC--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e cerAty1.NW_012001373v1 3670285 676 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e manLeu1.NW_012101652v1 55102 656 - 179258 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=4116436.000000 s hg38.chr20_KI270870v1_alt 88970 560 + 183433 ctcttccaacagtgagaaagctggtttccattatctttaatgtgtttacttctttgatcCACCTCTTTCCCCATACCAGCACCCTCCTTACTCCACACAAGTGCTGACCCCTTGCTGAGCCCCTCTCTGCAGGCCAA-CCTCTGGGTCGCCACAGGACAGCCCCACCCTCTGTTCTAGGCCTT-GGTGGGGACACCTTCTCCCCTGCAAGGGCTCTGGTGCTGGGGAGCCTCACTGGCCAGTTGCCCAGGACTTTGGGGTTCACAGGGTGTGGGCCAGGACAAT-CCAAGTATAATGGGCTGAT-----------TGGCCTCCCTGTGGCTCCAGAACTGGACCTTTTCGGACACTTGTGCTCACAGTGACCAGCTAGCTTCCTT-TGTAGCGTTGAGCGTTATCTTTCTTTATCTTCAGTGTTTCGCTGGTGGACCAAACA--GTTTACCAGTGTTATGTCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGACAGTGATCA-CCACCCCTGCCACATGCACCTCCCTGCCCTCGCTTCCCTTACTCGCG-------GTTCAATGCTCAGtttttgaggct s panTro5.chr20 66413666 559 + 66533130 ctcttccgacagtgagaaagctggtttccattatctt-aatgtgtttacttctttgatcCACCTCTTTCCCCGTAGCAGCACCCTCCTTACTCCACACAAGTGCTGACCCCTTGCTGAGCCCCTCTCTGCAGGCCAA-CCTCTGGGTCGCCACAGGACAGCCCCACCCTCTGTTCTAGGCCTT-GGTGGGGACACCTTCTCCCCTGCAAGGGCTCTGGCACTGGGGAGCCTCACTGGCCAGTTGCCCAGGACTTTGGGGTTCACAGGGTGTGGGACAGGACAAT-CCAAGTATAATGGGCTGAT-----------TGGCCTCCCTGTGGCTCCAGAACTGGACCTTTTCTGACGCTTGTGCTCACAGTGACCAGTTAGCTTCCTT-TGTAGCGTTGAGCGTTATCTTTCTTTATCTTCAATGTTTCGCTGGTGGACCAAACA--GTTTACCAGTGTTATGTCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGACGATGATCA-CCACCCCTGCCCCATGCACCACCCTGGCCTCACTTCCCTTACTCATT-------GTTCAATGCGCAGtttttgaggct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62090661 560 + 62195757 ctcttccgacggtgagaaagctggtttccattatctttaatgtgtttacttctttgatcCACCTCTTTCCCCGTAGCAGCACCCTCCTTACTCCACACAAGTGCTGACCCCTTGCTGAGCCCCTCTCTGCAGGCCAA-CCTCTGGGTCGCCACAGGACAGCCCCACCCTCTGTTCTAGGCCTT-GGTGGGGACACCTTCTCCCCTGCAAGGGCTCTGGCGCTGGGGAGCCTCACTGGCCAGTTGTGCAGGACTTTGGGGTTCACAGGGTGTGGGACAGGACAAT-CCAAGTATAATGGGCTGAT-----------TGGCCTCCCTGTGGCTCCAGAACTGGACCTTTTCTGACACTTGTGCTCACAGTGACCAATTAGCTTCCTT-TGTAGCGTTGAGTGTTATCTTTCTTTATCTTCAATGTTTCGCTGGTGGACCAAACA--GTTTACCAGTGTTATGTCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGACGATGATCA-CCACCCCTGCCCCATGCACCACCCTGGCCTCACTTCCCTTACTCATT-------GTTCAATGCGCAGtttttgaggct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 479480 560 - 578057 ctcttccaacagtgagaaagctggtttccattatctttaatgtgtttacttctttgatcCACCTCTTTCCCCGTACCAGCACCCTCCTTACTCCACACAAGTGCTGACCCCTTGCTGAGCCCCTCTCTGCAGGCCAA-CCTCTGGGTCGCCACAGGACAGCCCCACCCCCTGTTCTAGGCCTT-GGTGGGGACACCTTCTCCCCTGCAAGGGCTCTGGTGCTGGGGAGCCTCACTGGCCAGTTGCCCAGGACTTTGGGGTTCACAGGGTGTGGG-CAGGACAAT-CCAAGTATAATGGGCTGAT-----------TGGCCTCCCTGTGGCTCCAGAACTGGACCTTTTCTGACACTTGTGCTCACAGTGACCAGTTAGCTTCCTT-TGTAGCATTGAGC-TTATCTTTCTTTGTCTTCAATGTTTCGCTGGTGGACCAAACAGTGTTTACCAGTGTTATGTCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGACGATGATCA-CCACCCCTGCCCCATGCACCGCCCTGGCCTCACTTCCCTTACTCGCC-------ATTCAATGAGCAGtttttgaggct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110004520 561 - 110113093 ctcttccaacagtgagaaagctggtttccattatctttaatatgtttacttctttgatcCACCTCTTTCCTCATACCAGCACCCTCCTCACTCCACACAAGTGCTGACCCCTTGCTGAGCCTCTCTCTGCAGGCCAA-CCTCTGGGTCTCCACAGGCCAGCCCCACCCTCCGTTCTAGGCCTT-GGTGGGGACACCTTCTCCCCTGCAAGGGCTCTGGTGCTAGGGAGCCTCGCTGGCCAGTTGCCCAGGACTTTGGGGTGCATAGGGTGTAGGACAGGACATT-CCAAGTATAAGGGGCTGGT-----------TGGCCTCCCTGTGGCCCCAGAACTGGACC-TTTCTGACACTTGTGCTCACAGTGACCAGTTAGCTTCCTT-TGTAGCATTGAGCATTATCTTTCTTTATCTTCATTGTTTCGCTGCTGGACCAAGCAGTATTTACCAGTGTTATATCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGATAATGATCA-CCACCCCTGCCCCATGCACCGCCCTGGCCTCACTTCCCTTACTCACT-------GTTCAATGCGCAGtttttgaggct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92730293 527 - 92844088 ctcttccaacggtgagaaagctggtttccattatcttcaatatgtttacttccttgACCCACCTCTTTCCCCACACCAGCGCCCTCCTCACCCCACACACGTGCTGACCCCTTACTGGGCCCCTCTCTGCAGGCCAAACCTCTGGCTCTCCACAGGACAGCCCCACGCTCTGTTTTAGGCCTT-GGTGGGGACACCTTCTCCCCTGGAAGGGCTCTGGTGCTAGGGAGCCTCACTGGTCGGTTGCCCAGGACTGTGGGGTTCATGAGGTGTGGGACAGGACGATCCCAAGTATAATGGGCTGGT-----------TGGCCTCCCTGTGGCCCCAGAAC-------------------------------------TAGCTTCCTT-TGTAGCACTGAGCATTATCTTTCGTTATCTTCAACGTTTCACTGCTGGACCAAGCAGTATTTACCAGTGTTATATCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGATAATGATCA-CCACTCCTGCCGCAGGCACCGCCCTGGCCTCACTCCCCTTACTCAGT-------GTTCAATGCGCAGtttttgagact i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96398275 527 + 96509753 ctcttccaacagtgagaaagctggtttccattatcttcaatatgtttacttccttgatcCACCTCTTTCCCCACACCAGCGCCCTCCTCACCCCACACACGTGCTGACCCCTTACTGGGCCCCTCTCTGCAGGCCAAACCTCTGGCTCTCCACAGGACAGCCCCACGCTCTGTTTTAGGCCTT-GGTGGGGACACCTTCTCCCCTGGAAGGGCTCTGGTGCTAGGGAGCCTCACTGGTCGGTTGCCCAGGACTGTGGGGTTCATGAGGTGTGGGACAGGACGATCCCAAGTATAATGGGCTGGT-----------TGGCCTCCCTGTGGCCCCAGAAC-------------------------------------TAGCTTCCTT-TGTAGCACTGAGCATTATCTTTCGTTATCTTCAACGTTTCACTGCTGGACCAAGCAGTATTTACCAGTGTTATATCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGATAATGATCA-CCACTCCTGCCGCAGGCACCGCCCTGGCCTCACTCCCCTTACTCAGT-------GTTCAATGAGCAGtttttgagact i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16869257 527 - 16982598 ctcttccaacagtgagaaagctggtttccattatcttcaatatgtttacttccttgatcCACCTCTTTCCCCACACCAGCGCCCTCCTCACCCCACACACGTGCTGACCCCTTACTGGGCCCCTCTCTGCAGGCCAAACCTCTGGCTCTCCACAGGACAGCCCCACGCTCTGTTTTAGGCCTT-GGTGGGGACACCTTCTCCCCTGGAAGGGCTCTGGTGCTAGGGAGCCTCACTGGTCGGTTGCCCAGGACTGTGGGGTTCATGAGGTGTGGGACAGGACGATCCCAAGTATAATGGGCTGGT-----------TGGCCTCCCTGTGGCCCCAGAAC-------------------------------------TAGCTTCCTT-TGTAGCACTGAGCATTATCTTTCATTATCTTCAACGTTTCACTGCTGGACCAAGCAGTATTTACCAGTGTTATATCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGATAATGATCA-CCACTCCTGCCGCAGGCACCGCCCTGGCCTCACTCCCCTTACTCAGT-------GTTCAATGCGCAGtttttgagact i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3670961 527 - 3785965 ctcttccaacagtgagaaagctggtttccattatctttaatatgtttacttctttgatcCACCTCTTTCCCCATACCAGCGCCCTCCTCACCCCACACACGTGCTGACCCCTTACTGGGCCCCTCTCTGCAGGCCAAACCTCTGGCTCTCCACAGGACAGCCCCACCCTCTGTTTTAGGCCTT-GGTGGGGACACCTTCCCCCCTGGAAGGGCTCTGGTGCTAGGGAGCCTCACTGGTCGGTTGCCCAGGACTGTGGGGTTCATGAGGTGTGGGACAGGATGATCCCAAGTGTAATGGGCTGGT-----------TGGCCTCCCTGTGGCCCCAGAAC-------------------------------------TAGCTTCCTT-TGTAGCAGTGAGCATTATCTTTCATTATCTTCAACGTTTCACTGCTGGACCAAGCAGTATTTACCAGTGTTATATCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGATAATGATCA-CCACTCCTGCCGCAGGCACCGCCCTGGCCTCCCTCCCCTTACTCAGT-------ATTCAATGTGCAGtttttgagact i cerAty1.NW_012001373v1 I 676 C 0 s manLeu1.NW_012101652v1 55758 527 - 179258 ctcttccaacagtgagaaagctggtttccattatctttaatatgtttacttctttgatcCACCTCTTTCCCCATACCAGCGCCCTCCTCACCCCACACACGTGCTGACCCCTTACTGGGCCCCTCTCTGCAGGCCAAACCTCTGGCTCTCCACAGGACAGCCCCACCCTCTGCTTTAGGCCTT-GGTGGGGACACCTTCTCCCCTGGAAGGGCTCTGGTGCTAGGGAGCCTCACTGGTCGGTTGCCCAGGACTGTGGGGTTCAGGAGGTGTGGGACAGGATGATCCCAAGTATAATGGGCTGGT-----------TGGCCTCCCTGTGGCCCCAGAAC-------------------------------------TAGCTTCCTT-TGTGGCAGTGAGCATTATCTTTCATTATCTTCAACGTTTCACTGCTGGACCAAGCAGTATTTACCAGTGTTATATCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGATAATGATCA-CCACTCCTGCCGCGGGCACCGCCCTGGCCTCACTCCCCTTACTCAGT-------ATTCAATGTGCAGtttttgagact i manLeu1.NW_012101652v1 I 656 C 0 s colAng1.NW_012114444v1 5541322 528 - 5823884 ctcttccaacaatgagaaggctggtttccgttatctgtaatatgtgtacttctttgatcCACCTCTTTCCCCATACCAGCGCCCTCCACACCCCACACACGTGCTGACCCCTTACTGAGCCCCTCTTTGCAGGCCAACCCCCTGGCTCTCCACAGGACAGCCCCACCCTCTGTTTTAGGCCTT-GGTGGGGACACCTTCTCCCCTGGAAGGGCTCTGGTGCTAGGGAGCCTCACTGGTCGGTTGCCCAGGACTGTGGGGTTCATGAGGTGTGGGACAGGACGATCCCGAGTATAATGGGCTGGT-----------TGGCCTCCCTGTGGCCCCAGAAC-------------------------------------TAGCTTCCTT-TGTAGCACTGAGCGTTATCTTCCATTATCTTCAACGTTTCACTGCTGGACCAAGCAGTATTTACCAGTGTTATATCTCATACAAGATTTTGTGGTTTGTTTTTCTTGTAGATAATGATCACCCACTCCTGCCGCAGGCACCACCCTGGCCTCACTCCCCTTACTCAGT-------GTTCAGTGCGCAGtttttgagact i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 24455 552 + 372756 ctcttccaacattgagaaagctgatttctgttgtctttaatatatttacgtatttggtccacccCCTTCCCTGTACCAACAGCCTCCTTACTCCACAGAAGTGCTGACCCCTCTCTGGGCCCCTCTCT-CAGGCCAACCCTCTGGCTCTC--CAGGATA-CCCCACCCTCTGCTCTAGGCCCT-G--AGGGCCACC-TCTCCCCTGCAAGGGCTCTGGTGCTAGGGAGCCTCACGGGCCAGTTACCCAGCACTGTGGGGCTCATGGGGTGTGGGACAGGGCAGCCCCAAGTGTCATGGGGTGGT-----------TGGCCTCCCTGTGGCCCCAGAACTGGACCC-ATCTGCCACTTGTGCTCACAGTGACCAGTTAGCTTCCTT-TGTAGCATTGAGCATTATCT----TTATCTTCAATGTTTCACTGCTGGACCAAGCAGTATTTACCAGTGTTGTTTCTCATACAAGATTTTGTGTTTTGTTTTTCTTGAAGAAAATTATCA-CCACCCCTGCCCCATGCACCGCCCTGGCCTCATTCCACTTGCTTAGT-------GTTCAATGTGCAGTAtttgcgact i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16261878 544 + 16356641 cttttccaacactgagaaagctgatttccattatctttaatatatttacttatttgatccacccCCTTCCCTGTACCAACAGCCTCCTTACTCCACA-CAGTGCTGACCCCTCACTGGGCCCCTCTCT-CAGGCCAACCCTCTGGCTCTC--CAGGACG-CCCCACCCTCTGCTCTAGGCCTT-G--GGGGACCCC-TCTCCCCTGCAAGGGTTCTGGTGCTAGGGAGCCTCACTGGCCAGTTACCTAGTGCTGTGGGGCGCATGGGGTGTGGGACAGGGCAGCCCCAAGTGTCATGG------------------GGCTTCCCTGTGGCCCCAGAACTGGACCT-TTCTTCCACTTGTGCTCACAGCGAACAGTTAGCTTCCTT-TGTGGCATTGAGCATTATCT----TTATCTTCAATGTTTCCGTGCGAGACCAAGCAGTATTTACCAGCGTTATTTCTCATACAAGATTTTGTGTTTTGTTTTTCTTGCAGAAAATTATCA-CCACCCCTGCCCCACGCACCGCCCTGGCCTCATTCCCCTTGCTTAGT-------GTTCAATGTGCAGCAtttgcgact i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1130977 558 + 1231380 ctcttccaacgtcgagaaagctgatttccattatctttaatatatttacttatttgatccacccCCTTCCCTGTGCCAACAGCCTCCTTACTCCACACAAGTGCTGACCCCTTGCTGGGCCCCTCTCT-CAGGCCAACCCTCTGGCTCTC--CAGGACA-CCCCACCCTCTGCTCTAGGCCTT-G--GGGGATCCC-TCTCCCCTGCAAGGGCTCTGGTGCTAGGGAGCCTCACTGGCCAGTTACCCAGTGCTGTGGGGCTCATGGGGTGTGGGACAGGGCAGCCCCAAGTGTCATGGGGTGTT-GGCCTC-CTGGGGCTTCCCTGTGGCCTCAGAACTGGACCC--TCTGCCACTTGTGCTCACAGCGACCAGTTAGCTTCCTT-TGTAGCATTGAGCATTATCT----TTATCTTCAATGTTTCCCTGCTGGGCCAAGCAGTATTTAACAGCGTTATTTATCATACAAGATTTTGTGTTTTGTTTTTCTTGTAGAAAATTGTCA-CCACCCCTGCCCCACGCACCGCCCTGGCCTCATTCCCCTTGCT--GT-------GTTCAATGCACAGTGtttgcgact i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2661200 553 + 11732439 cccttccaacactgagaaagctgatttccattatctctaatatatttacttatttgatccacccCCTTCCCTGTACCAACAGCCTCCTTACTCCACATGAGTGCTGATCCCTCGCTGGGCCCCTCTCT-CAGGCCAACCCTCTGGCTCTC--CAGGACA-CCCCACCCTCTGCTCTAGGCCTTGG--GGGGACACC-TCTCCCATGCAAGGGCTCTGGTGCTAGGAAGCCTCACTGGCCAGTTACCCAGCACCGTGGGGCTCATGGGGTGTGGGACAGGGCAGCCCCAAGTGTCATGGGGTGGTTGGCCTCGCTGGGGCTTCCCCGTGGCCCCAGAACTGGACCC-TTCTGCCACCTGCGCTCACAGCAACCAGTTAGCTTCCTT-TGTAGCACTGAGTGTTATCT----TTATCTTCAATGCTTCACTGCTGGACCAGGCAGTGTTTGCCAGCGTTATTTCTCATACAAGATTTTGTG-TTTGTTTTTCTTGTAGAAAATTATCA-CCAGCCCTGTCCCATGCAC--CCCTG--------CCCCTCGCTTAGT-------GTTCAGTGCGCGGCAtttgcgact i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47587245 434 + 47698779 CCTTCCCCGCAGCGGGAGGCTTGGTTTCCATCACCCCCCAGAGGCACAGTGGGTGG-------------------CTGGAgccccccgcgcccccgccgggTGCTGCCCCAGGCCCGAGCGCCCCCCT-CA-------CCCCCTGCTCC---TGGCACAGCCCCGCAGGGCACTTCAGGCCTT---------------CGCCCCTGCTTGGCCCCGCGTGC------------------------CCAGGAC--TGGGGCTCCGTGCGCGGGCTCCAGGGCCAG-CCTGGCGTGATGAG----------------------------AGCCATGGGACCGGGCTC-TTCTGCCGCCGTCCCTCGGAG--------CAGCCTCCTCATGTCGCACGGGG-----TCTTTATTCACTT-----GTTTCACCACTGGGCCAAGCGGTGTGTGCAG--ATCATTTCTCATACCAGTT-------TTTGTCTTTCTTGTAGGTAATCATC--CCACCC----------CACTGCCCCAGC-----------TACTCGGTCCAGGGGGTGGCACGGCCCGCTCCGGGGGCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 223924 995 - 397369 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=2581309.000000 s hg38.chr20_KI270870v1_alt 89530 311 + 183433 gtgcatatctgg--attt-ttttat-tcttctacttcctgtgatcagtgttttgcctgggcatagag------gacatgccctgaag-ttgaatgtcaactcccttgaaattgggaagaggctttctctactgtctgtgaa-----tgctgctctggagcaatgtgatcctattctagttatcggttttgtttgtgactttttcccacttcaaaagcttttagggtcttttttctattcctggtgttttaaaattttatagtgccgggcttggttggatgtgggtctctttttattcacgattatgggcacttaatgggctttttaa s panTro5.chr20 66414225 308 + 66533130 gtgcatatctgg--attt-ttttat-tct---acttcctgtgatcagtgttttgcctgggcatagag------ggcatgccctgaag-ttgaatgtcaactcccttaaaattgggaagaggctttctctactgtctgtgaa-----cgctgctcttgagcaatgtgatcctattctagttatcggttttgtttgtgactttttcccacttcaaaagcttttagggtcttttttctattcctggtgttttaaaattttatagtgctgggcttggttggatgtgggtctctttttattcacgattatgggcacttaatgggctttttaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62091221 311 + 62195757 gtgcatatctgg--attt-ttttat-tcttctacttcctgtgatcagtgttttgcctgggcatagag------ggcatgccctgaag-ttgaatgtcaactcccttaaaattgggaagaggctttctctactgtctgtgaa-----cgctgctcttgagcaatgtgatcctattctagttatcagttttgcttgtgactttttcccacttcaaaagcttttagggtcttttttctattcctggtgttttaaaattttatagtgctgggcttggttggatgtgggtctttttttattcatgattatgggcacttaatgggctttttaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 480040 311 - 578057 gtgcatatctgg--attt-ttttat-tcttctacttcctgtgatcagtgttttgcctgggcatagag------ggcatgccctgaag-ttgaatgtcaactcccttaaaattgggaagaggctttctctactgtctgtgaa-----cgctgctcttgagcaatgtgatcctattctagttattggttttgtttgtgactttttcccacttcaaaagcttttagggtcttttttctattcctggtgttttaaaattttatagtgctgggcttggttggatgtgggtcttttttcattcacgattatgggctcttaatgggccttttaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110005081 307 - 110113093 gtgcatctctgg--attt-ttttac-tcttctacttcccgtgatcagtgttttgcc--ggcatagag------ggcatgccctgaag-ttgaatgtcaactcccttaaaactgggaagaggctttctctactgtctgtgaa-----cgctgctcctgag-aatgtgatcctattctagttatcagtttcgtttgtgactttttccccctttaaaagcttttagggtc-tttttctattcctggtgtttaaaaattttatagtgctgggcttggttggatgtgggtctttttttattcactgttatgggtgcttaatgggccttttaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92730820 314 - 92844088 gtgcgtatctgg--attt-ttttta-tccactacttcccgcgatcaatgttttgtctgggcatagag------ggtatgccctgaag-ttgaatgtcaacacccttaaaatcgggaagaggctttctctgctgtctgtgaacatcccactgctcctaagcaatgcgatcctattctagttatt-gtttcatttgtgactttttccccctttgaaagcttttagggtgtcttttctattcctggtgttttaaaattttatagtgctgggcttggttggatgtgggtc-ttttttattcactgttatgggcacttaatgggccttttaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96398802 314 + 96509753 gtgcgtatctgg--attt-ttttta-tccactacttcccgcgatcaatgttttgtctgggcatagag------ggtatgccctgaag-ttgaatgtcaacgcccttaaaatcgggaagaggctttctctgctgtctgtgaacatcccactgctcctaagcaatgcgatcctattctagttatt-gtttcatttgtgactttttccccctttgaaagcttttagggtgtcttttctattcctggtgttttaaaattttatagtgctgggcttggttggatgtgggtc-ttttttattcactgttatgggcacttaatgggccttttaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16869784 311 - 16982598 gtgcgtatctgg--attt-ttttta-tccactacttcccgcgatcagtgttttgtctgggcatagag------ggtatgccctgaag-ttgaatgtcaacgcccttaaaatcgggaagaggctttctctgctgtctgtgaacatcccactgctcctaagcaatgcgatcctattctagtta----tttcatttgtgactttttccccctttgaaagcttttagggtgtcttttctattcctggtgttttaaaattttatagtgctgggcttggttggatgtgggtc-ttttttattcactgttatgggcacttaatgggccttttaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3671488 314 - 3785965 gtgtgtatctgg--attt-ttttta-tctactacttcccgtgatcaatgttttgtctgggcatagag------ggtatgccctgaag-ttgaatgtcaactcccttaaaatcgggaagaggctttctctgctgtctgtgaacatcccactgctcctaagcaatgcgatcctattctagttatt-gtttcatttgtgactttttccccctttgaaagcttttagggtgtcttttctattcctggtgttttaaaattttatagtgctgggcttggttggatgtgggtc-ttttttattcactgttatgggcacttaatgggccttttaa i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 56285 314 - 179258 gtgcgtatctgg--attt-ttttaa-tctactacttcccgtgatcaatgttttgtctgggcatagag------ggtatgccctgaag-ttgaatgtcaactcccttaaaatcgggaagaggctttctctgctgtctgtgaacatcccactgctcctaagcaatgcgatcctattctagttatt-gtttcatttgtgactttttccccctttgaaagcttttagggtgtcttttctattcctggtgttttaaagttttatagtgctgggcttggttggatgtgggtc-ttttttattcactgttatgggcacttaatgggccttttaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5541850 317 - 5823884 gtgcatatctgg--attt-tttttattctactgcttcccatgatcaatgttttgtctgggcctagag------ggtatgccctgaagtttgaatgtcaactcccttaaaatcggaaagagcctttctctgctgtctgtgaacatcccactgctcctaagcaatgcgatcctgttccagttatt-gtttcatttgtaactttttccccctttaaaagcttttagggtctgttttctattcctggtgttttaaaatttgatagtgctgggcttggttggatgtgggtctttttttattcactgttatggacacttaatgggccttttaa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 25007 309 + 372756 ctgcatatctga-tgtat-ttttat-tctactacatcccttgatcaatattttgtctgggcatagag------ggtatgccctgaag-tcaaaaatcaact--cttaaaattgggaagc--ctttctctgctgtctgtgaacaccccgctgctcctgactagtgtgatcctattccagttagaggtttcgtttgtgacttttttcccctttaaaagtttttagggacttttttctattcctgg----ttaaaattttacagtgctgggcttggttacatgtgggtctttttttattcactgtgatgggcacttaatgggccttttaa i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16262422 314 + 16356641 gtgcgtatctga-tgtat-ttttat-tctattacatcccttgatcaatattttgtctggacatagag------ggtatgccctgaag-tcaaaaatcaactcccttaaaattgggaagc--ctttctctcctgtctgtgaacaccccgctgctcctgagtagtgtgatcctattctagttacaggtttcgtttgtgacttttttcccctttaaaagcttttagggacttttttctattcctggtg-tttaaaattttacagtgctgggcttggttggatgtgggtcttttttaattcactgtgatgggcacttaatgggccttttaa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1131535 314 + 1231380 ctgcatagctga-ggtat-ttttat-tctgctacatcccttgatcaatattttgtctgggcatagag------ggtatgccctgaag-tcaaaaatcaactcccttaaaattgggaagc--ctttctctactgcctgtgaacaccctgctgctcttgagtagtatgatcctatcctagttacaggattcatctgtgactttttttccctttaaaagcttttagggacttttttctattcctggtg-tttagaattttacagtgctgggcttggttggatgtgggtctttttttattcattgtgatgggcacttaatggcccttttaa i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2661753 313 + 11732439 gtgcgtatctga-tgtgt-ttttat-tctactacatccctcgatcagtattttgtctgggcgtagag------ggtatgccctgaag-tcaaaactcaactcccttaaaatcaggaaga--ctttctctaccgtctgtgaaca-cttgctgctcctgagaagtgtgaccctgttctagttacacgtttcgtttgtgacttttttcccttttaaaagcttttaggaacttttttctattcctggtg-tttaaaattttacagtgctgggcttggttggatgtgggtctttttttattcactgtgatgggcacttaatgggccttttaa i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47587679 278 + 47698779 GCGTGGCTCTGGGGGTGT-TTTCAT-TCTGCCGCTTCCCTTGCTTGAGACGGTGCCTGGGCCCAGAC------AGCACAC----AGG-CCGATTTTCAAC---CTTATAGTTTTGAAGt-tcttgcttcgctgtc---------------------gagaaacccgatgccatcccgatgatatcttttgcttgtgaccttt--ccccagtggaagcccggaggatcctcttggtactcctggtattttagaattttattgtgctcagcttggttgga-gcaggtctttgttt--------tgttaggtacgtaatgggtcttttaa i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 224919 296 - 397369 GTGCATCTTGGG--ACCTGCCTTTC-TCTACCACTTCCCTTCACTTGCATTTTGTCT-GGCACAGAGGGTGGTGGTGGGTTTTCAGC-TTGAAGGTGAATTCTC------------AGGATCTTGCTCCGC-GTGTTTCAGCATCACgctgctgctgagaaatcaggtgccat-ctggtcaat-gtctcttctgggaacttctccct-----ggaggtttttgggacactcctcccctcctggtgctttagcacgtcacag-gctgggcttgg----atgtgggtc-ttactcgtttcctgggctgggtgcttaatggttcttttaa i dasNov3.JH569290 I 995 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e otoGar3.GL873542 22823864 2393 + 22939663 I a score=3974783.000000 s hg38.chr20_KI270870v1_alt 89841 481 + 183433 tctaaaaatataatttcctttagttctcggaaaa-ttttttttatta-tttaacttacacttttccttcccattttcttaattctctctttctggaactcccaaatcgggtgtcagtcc-------tcactcagcgtttcctccgtctctgc--tatctcttcgtccttttgttcactttcct--agtatatttctttgactctatctcccaagtcttctgttgaatttttcattttggttttacaatttatttccaagTTGGGGAGGATGGACACAATGGTATTAAGCCTTCCCAAACAAGTC----------------CTCCTGTCACTGTCTGGGCTGGGCCA-TATCT-GCCCTGTCCACATGCGT-CTGGAGAGTCTGTGTCCTGCC------------------------TCCTGGTTTGTCCTTGTTCCTGCTCTAACCGCTGCCCACACTGTTAGTCGAGGGAGCCTGAAGGAGCCTCCTGAAACACTCATTTGCTCATCCAGTGCAGGTTCC----------------------T--CCCACAGGCCAGGAA s panTro5.chr20 66414533 481 + 66533130 tctaaaaatataatttcctttagttctcggaaaa-ttttttttatta-tttaacttacacttttccttcccattttcttaattctctctttctggaactcccaaactgagtgtcaggcc-------tcactcagcgtttcctccgtctctgc--tatctcttcgtccttttgttcaatttcct--agtatatttctttgactctatctcccaagtcttctgttgaatttttcattttggttttacaatttatttccaagTTGGGGAGGATGGACACAATGGTATTAAGCCTTCCCAAACAAGTC----------------CTCCTGTCACTGTCTGGGCTGGGCCA-TATCT-GCCCTGTCCACATGCGT-CTGGAGAGTCTGTGTCCCGCC------------------------TCCTGGTTTGTCCTTGTTCCTGCTCTAACCGCTGCCCACACTGTTAGTCGAGGGAGCCTGAAGGAGCCTCCTGAAACATTCATTTGCTCATCCAGTGCAGGTTCC----------------------T--CCCACAGGCCAGGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62091532 480 + 62195757 tctaaaaatataatttcctttagttctcgg-aaa-ttttttttatta-tttaacttacacttttccttcccattttcttaattctctctttctggaactcccaaatcgagtgtcagtcc-------tcactcagtgtttcctccgtctctgc--tatctcttcgtccttttgttcactttcct--agtatatttctttgactctatctcccaagtcttctgttgaatttttcattttggttttacaatttatttccaagTTGGGGAGGATGGACACAATGGTATTAAGCCTTCCCAAACAAGTC----------------CTCCTGTCACTGTCTGGGCTGGGCCA-TATCT-GCCCTGTCCACATGCGT-CTGGAGAGTCTGTGTCCCGCC------------------------TCCTGGTTTGTCCTTGTTCCTGCTCTAACCGCTGCCCACACTGTTAGTCGAGGGAGCCTGAAGGAGCCTCCTGAAACATTCATTTGCTCATCCAGTGCAGGTTCC----------------------T--CCCACAGGCCAGGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 480351 481 - 578057 tctagaaatataatttcctttagttctcagaaaa-ttttttttatta-tttaacttacacttttccttcccattttcttaattctctctttctggaactcccaaattgggtgtcaggcc-------tcactcagcgtttcctctgtctctgc--tatctcttcgtccttttgttcactttcct--agtatatttctttgactctatctcccaagtcttctgttgaatttttcattttggttttacaatttatttccaagTTGGGGAGGATGGACACAATGGTATTAAGCCTTCCCAAACAAATC----------------CTCCTGTCACTGTCTGGGCTGGGCCA-TATCT-GCCCTGTCCACATGCGT-CTGGAGAGTCTGTGTCCTGCC------------------------TCCTGGTTTGTCCTTGTTCCTGCTCTAACCGCTGCCCACACTGTTAGTCGAGGGAGCCTGAAGGAGCCTCCTGAAACATTCATTTGCTCATCCAGTGCAGGTTCC----------------------T--CCCACAGGCCAGGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110005388 481 - 110113093 tctaaaaatataatttcctttagttctggggaaa-ttttttttatca-tttaacttacgcttttccttcccattttcttaattctctctttctggaacttccaaatcgggtgtcaggcc-------tcactcagcgtttcctccgtctctcc--tatctcttcgtccttttgttcccttttct--agtatatttctttgactctatctcccaggtcttctgctgaatttttcattttggttttacaatttatttccaagTTGGGGAGGATGGACACAATGGTATCAAGACTTCCCAAATAAGTC----------------CTCCTGTCACTGTCTGGGCTGGGCCA-TATCT-GCCCTGTCCACATGCGT-CTGGAGAGTCTGTGTCCTGCC------------------------TCCTGGTCTGTCCTTGTTCCTGCTCTAACCGCTGCCCACACTGTTAGTGGAGGGAGCCTGAAGGAGCCTCCTGAAACATTCATTTGCTCATCTGGTGCAGGTTCC----------------------T--CCCACAGGTCAGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92731134 444 - 92844088 tctaaaaatataatttcctttagttctggggaat-ttttttttt----tttaacttatgcttttccttcccattttcttaattatttctttctggaactcccaaatcgggtgtcagacc-------tcgctcagtgtttcctctgtctctc------ctctttgtccttttgttctcttttct--agtatatttctttga--ctatctcccaagtcttctattgaatttttcatcttggttttacaatttatttccaagTTGGGGCAGATAGACACAATGGTATGAAACCTTCCCAAACAAGTC----------------CTCCTGTCGCTGTCTGGGCTGGGCCA-TATCT-GCGCTGTCCACATGTGT-C----------------------------------------------------TGTGCTTGTTCCTGCTCTAACCACTGCCCACACCGTTGGTCGAGGGACCCTGAAGGAGCCTCCTGAGACATTGATTTGCTCACCCGGTGCAGGTTCC----------------------T--CCCGCAGGCCTGGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96399116 444 + 96509753 tctaaaaatataatttcctttagttctggggaat-ttttttttt----tttaacttatgcttttccttcccattttcttaattatttctttctggaactcccaaatcgggtgtcagacc-------tcactcagtgtttcctctgtctctc------ctctttgtccttttgttctcttttct--agtatatttctttga--ctatctcccaagtcttctattgaatttttcatcttggttttacaatttatttccaagTTGGGGCAGATAGACACAATGGTATGAAACCTTCCCAAACAAGTC----------------CTCCTGTCGCTGTCTGGGCTGGGCCA-TATCT-GCGCTGTCCACATGTGT-C----------------------------------------------------TGTGCTTGTTCCTGCTCTAACCACTGCCCACACCGTTGGTCGAGGGACCCTGAAGGAGCCTCCTGAGACATTGATTTGCTCACCCGGTGCAGGTTCC----------------------T--CCCGCAGGCCAGGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870095 448 - 16982598 tctaaaaatataatttcctttagttctggggaat-ttttttttt----tttaacttatgcttttccttcccattttcttaattatttctttctggaactcccaaatcgggtgtcagacc-------tcactcagtgtttcctctgtctctcc--tatctctttgtccttttgttctcttttct--agtatatttctttga--ctatctcccaagtcttctattgaatttttcatcttggttttacaatttatttccaagTTGGGGCAGATAGACACAATGGTATGAAACCTTCCCAAACAAGTC----------------CTCCTGTCACTGTCTGGGCTGGGCCA-TATCT-GCGCTGTCCACATGTGT-C----------------------------------------------------TGTGCTTGTTCCCGCTCTAACCACTGCCCACACTGTTGGTCGAGGGACCCTGAAGGAGCCTCCTGAGACATTGATTTGCTCACCCGGTGCAGGTTCC----------------------T--CCCGCAGGCCAGGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3671802 431 - 3785965 tctaaaaatataatttcctttagttctggggaat-ttttttttttttatttaacttatgcttttccttcccattttcttaattatttctttttggaact------------------------------ctcagtgtttcctctgtctctcc--tatctctttgtccttttgttctcttttgt--agtatatttctttgactctatctcccaagtcttctattgaatttttcatcttggttttacaatttatttccaagTTGGGGCAGATAGACACAATGGTATGAAACCTTCCCAAACAAGTC----------------CTCCTGTCACTGTCTGGGCTGGGCCA-TATCT-GCGCTGTCCACATGTGT-C----------------------------------------------------TGTGCTTGTTCCTGCTCTAACCGCTGCCCACACCATTGGTCGAGGGACCCTGAAGGAGCCTCCTGAGACATTGATTTGCTCAGCCGGTGCAGGTTCC----------------------T--CCCACAGGCCAGGAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 56599 451 - 179258 tctaaaaatataatttcctttagttctggggaat-tttttttttt---tttaacttatgcttttccttcccattttcttaattatttctttctggaactcccaaatcgggtgtcagacc-------tcactcagtgtttcctctgtctctcc--tatctctttgtccttttgttctcttttct--agtatatttctttgactctatctcccaagtcttctattgaatttttcatcttggttttacaatttatttccaagTTGGGGCAGATAGACACAATGGTATGAAACCTTCCCAAACAAGTC----------------CTCCTGTCACTGTCTGGGCTGGGCCA-TATCT-GCGCTGTCCACATGTGT-C----------------------------------------------------TGTGCTTGTTCCTGCTCTGACCGCTGCCCACACCGTTGGTCGAGGGACCCTGAAGGAGCCTCCTGAGACGTGGATTTGCTCACCCGGTGCAGGTTCC----------------------T--CCCGCAGGCCAGGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542167 453 - 5823884 tctaaaaatataatttcctttagttctggggaat-tttttttttt---tttaacttatgcttttccttcccattttcttaattatttctttctggaactcccaaatcaggtgtcagacc-------tcactcggtgtttcctctgtctctcctatatctctttgtccttttgttctcttttct--agtatatttctttgactctgtctcccaagtcttctattgaatttttcatcttggttttacaatgtatttccaagTTGGGGCAGATAGACACAATGGTATGAAACCTTCCTGAACAAGTC----------------CTCCTGTCACTGTCTGGGCTGGGCCG-TATCT-GCCCTGTCCACATGTGT-C----------------------------------------------------TGTCCTTGTTCCTGCTCTAACCGCTACCCACACTGTTGGTCGAGGGACCCTGAAGGAGCCTCCTGAGACATTTATTTGCTTACCCGGTGCAGGTTCC----------------------T--CCCGCAGGCCAGGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 25316 462 + 372756 tctaagaatataatttcctttagttctgaggag--tttttttcatta-tttaacttatgcttttccttcccattttcttgattctctctttctgggactcccagattggatgtcaggcc-------tcacccagtgtttcttctaactcttc--tatctcttttaccttttgttcacttttttaaagtatatgtctttgactctatctcccaagtc-tctattgaatttttcattttggttttaccatttatttccaagCTGGGGAGGACTGACATGATGGTATTAAGCCTTCCCAGGCAACTC----------------CTCCTGTCACCGTCTGGATGGGGCCA-TGTCT-GTCCTGTCCACATGCCTGCTGGACAGTC-------------------------------------------TGTCCTTGTTCCTGCTCTAACCGCTGTCCACACTGTTAGTGGAGGGAGACTGAAGGAG-CTCCTGAAACATTCATTTACTCATCCAGTGCAGGTTCC----------------------T--CCTGCAGGCCAGGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16262736 459 + 16356641 tctaagaatataatttcctttagttctgaggaa--ttgtttttatta-tttaacttatgcttttccttcccatgttcttgattctctgtttctgggactcccagattggatgtcaggcc-------tcacccagtgtttcttccaactctcc--tatctctttgtcctttggttcacttcttt--agtatatttctttgactctatctcccaagtc-tctatcgaatttttaattttggttttaccatttatttccaagCTGGGGAGGACCGACATGATGGTATTGCGCCTTCCCAGGTAACT-----------------CTCCTGTCGCCATCTGGGTGGGGCTG-TGTCT-GCCCTGTCCACACACCCGCTGGACAGTC-------------------------------------------TGTCCTTGTTCCTGCTCTAACTGCTGTCCACACTGTTAGTCGAGGGAGCCTGAAGGAG-CTCCTGAAACATTAATTTGCTCATCCAGTGCAGGTTCC----------------------T--CCTGAAGGCCAGGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1131849 460 + 1231380 tctaagaatataatttccgttagttctgaggaa--ttgtttttatta-tttatcttatgcttttcctgcccatgttcctgatcctctctttctgggactcccagattggatgtcaggcc-------tcacccagtgtttcttccaactctcc--tacctctttgtccctttgttcactttttt-aagtatatttctttgactctatctcccaagtg-tctattgaatttttcattttggttttaccatttatttccaagCTGGGGAGCACCGACACGATGGTATTAACCCTTCCCAGGCAGCTC----------------CGCCTGTCG-TGTCTGGGTGGGGCCG-TGTCT-GCCCTGTCCACACGCCCACTGGACAGTC-------------------------------------------TGTCCTTGTCCCTGCTCTAACTGCTGTCCACACTGTTAGTTGAGGGAGCCTGAAGGAG-CTCCTGAAACATTCATTTGCTTATCCAGTGCAGGTTCC----------------------T--CCTGCAGGCCAGGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2662066 442 + 11732439 tctgagaatataatttcctttagttctgaggaa--ttttttttatta-t-----ttacgcttttccttcccattttcttgattctgtctttctgggactcccaggttggatgtcaggcc-------tcacccagcgtttcttccagctctcc--cgtctctttgtcctttcgttcagttttt---agaatatttctttgactctatctcccaagtc-tctattgaattttccattttggttttaccgtttatttcca-----------aCCGACACGACAGTGTTAACCCTTCCCAGGCAACTC----------------CTCCTGTCGCCGTCTGGGTGGGGCCG-TGTCT-GCCCCGTCCACACGCCTGCTGGACAGTC-------------------------------------------TCTCCTTGTTCCCGCTCTAACCGCTGTCCACACTGTTAGTCGAGGGACCCTGAAGGAG-CTCCCGAAACATTCATTTGCTCAT-CAGTGCAGGTTCC----------------------T--CCTGCAGGCCAGGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22826257 477 + 22939663 TCCAGCAATATA---------agttctgggaa---tattttttattt-tctaatttacactgcccct-cttatattcttggctctctctttctggaactccctcattagatggcagggc-------ttacacagcttttcttccttatctcc--catctttttgtcttcttgttcagttttct--agtatatttcttggactccatctctcaactcttctaccaaactttgcatttttgtttcataatttatttacaagTTAGAGAAGACAGACTTAA-AGTATTAGACCTTCCCAAACAGCTC------------------CCTGTCACTTCCTGGGCCAGGCCA-CACCT-GCTGCACTCG-GTGTTCACGGGACTGTCTGTGTTCAGCCCTCTCTACGACCCCCCCCACCCTGCCCCAGTCTGTTCTTGTTCTTGCGGTAGCC-TTGTTCATACTGTGGATA----------GAAGGAGCCCATCAAAACGTTTACTCTGTTGTCCATTG-AGGGTTC----------------------T--CCCACAGGTGGGAA- i otoGar3.GL873542 I 2393 C 0 s canFam3.chr24 47587957 469 + 47698779 tctagaaatataatttcctttagttctgggaaatcatttttttatta-attaattcatacttttccctcccatttt-ttggttctccttttctagaactctggaggtgggtgttcggtc-------tcacctggc---tccttccttactcc--catctc--------cttgctaacctttcc--agcacacaccttccactctaccttccagaccttgtgctggattcttcatgcggattttacattttatttccaaATTGGGAAAGACAGACACAGCGGTGCAGAGCCTCCCCAAAAAACTCCCACATGAGTCTTCAGCTCCCACCTCTGG-TGGGCTAGGCCG-TGTCT-GCTCCGTCTGGCTGCCC-TGGGTTC----------------------------------------------CGGCCCAGCTCCTGCCCT----GTTGTCCACCCCGT--------GGAG---GAGAGAGCTTCCTCACACGTGGACTTGTTCATCTGGCACAGGCTCCGAGGTGCATATCCGCCCCGAGGT--TCTAGATGCAGGGA- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 225215 422 - 397369 tctaaaaatataattccctttagttctgggaaa--taatttttat-a-tttaattaatactct-----------ttcttggttgtctctttccggaactcccaagtt-gatgtcaggtcctccatttttctcaagttttcctcattattttc--catct---tgtctttttattctccttcct--agtagatttctttgcctctaact-ccaactcttctcttatatttttcaattttcttccatattttatttccaaATT-GGGAAGTCAAACACAACAGTGTTATGCCTTCCAAATCAACTG----------------C-CATGCCAGCTTCCCGTCCTGGCCACTGTCTGGCCTTGTCCA--------G----------------------------------------------------TCGCCCTGCTCCCACTCTAAGCACCTTCCAC--------TGGAGCGAGCTGCAGTGCAGCTTCCTGGACACCC-----CCCACCTCCCCCAAGTTCC----------------------TGGCCCCCAGGCCCGG-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1837121 2196 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I a score=658867.000000 s hg38.chr20_KI270870v1_alt 90322 78 + 183433 AGGTCCCAGGAACAGCCATTATTGAGCACCCTGGCAGTTCTCAGACTGCG-GTGGGGACCT--CGCTTTGAACTTTGAGAG s panTro5.chr20 66415014 78 + 66533130 AGGTCCCAGGAACAGCCGTTATTGAGCACCCTGGCAGTGCTCAGGCTGCG-GTGGGGACCT--CGCTTTGAACTTTGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092012 78 + 62195757 AGATCCCAGGAACAGCCGTTATTGAGCACCCTGGCAGTGCTCAGGCTGCG-GTGGGGACCT--CGCTTTGAACTTTGAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 480832 78 - 578057 AGGTCCCAGGAACAGCCGTTATTGAGCACCCTGGCAGTTCTCAGACTGTG-GTGGGGACCT--CGCTTTGAACTTTGAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110005869 78 - 110113093 CGGTCCCAGGAACAGCTGTTATTGAGCGCCCTGGCAGTTCTCAGACTGCG-GTGGGGACCT--CGCTTTGAACTTTGAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92731578 77 - 92844088 AGGT-CCAGGAACAGCTGTGTTTGAGCACCCTGGCAGTCCTCAGACTGGG-GCGGGGACCT--CGCTTCGAACTCTGAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96399560 77 + 96509753 AGGT-CCAGGAACAGCTGTGTTTGAGCACCCTGGCAGTCCTCAGACTGGG-GCGGGGACCT--CGCTTCGAACTCTGAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870543 77 - 16982598 AGGT-CCAGGAACAGCTGTGTTTGAGCACCCTGGCAGTCCTCAGACTGGG-GCGGGGACCT--CGCTTCGAACTCTGAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672233 77 - 3785965 AGGT-CCAGGAACAGCTGTGTTTGAGCACCCTGGCAGTCCTCAGACTGGG-GCGGGGACCT--CGCTTCGAACTCTGAGAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57050 77 - 179258 AGGT-CCAGGAACAGCTGTGTTTGAGCACCCTGGCAGTCCTCAGACTGGG-GCGGGGACCT--CGCTTCGAACTCTGAGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542620 76 - 5823884 AGGT-CCA-GAACAGCTGTGTTTGAGCACCCTGGCAGTCCTCAGACTGGG-GCGGGGACCT--CGCTTCGAACTCTGAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 25778 80 + 372756 CAGTCCCAGGCACAGCTGCTACTGAGCACCCTGGCAGTGCTCAGACTGGG-GTGCGGACCTCCCATTTTGAACCTTGAGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263195 80 + 16356641 CAGTCCCAGGCACAGCTGCTACTGAGCACCCTGGCAGTTCTCAGACTGGG-GTGCGGACCTCCCACTTTGAACCTTGAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132309 74 + 1231380 CAGTCCCAGGC------GCTACTGAGCACCCTGGCAGTTCTCAGACTGGG-GTGCGGACCTCCCACTTTGAACCCTGAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2662508 64 + 11732439 CAGTCCCAGGC----------------ACCCTGGCAGTTCTCAGACTGGA-GTGCGGACCTCCCGCTTTGAACCTTGAGGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1839317 77 - 2029793 AGGTCCCAGGAGCAGCTGTCATTAAGCTCCCTGGCGGCTCCCAGGCT-GG-GTGGGGACCT--CGCCTTGAACTTGGAGAG i proCoq1.NW_012150197v1 I 2196 I 121 s otoGar3.GL873542 22826734 78 + 22939663 AGGTCCCAGGAGCAGCTGTCTTGAAGTTTCTTGGTGGTCCTCAGACTAGA-GTGGGGACCT--TGCTTTGAAAGTCGAGGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47588426 52 + 47698779 AGGCCCTGGGAACAGG--------------------------AATCTGGG-ATGGGGATCT--TACTGGGAATTTGGTGAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 225637 44 - 397369 ----------------CGTTGCCGAGCTCTCCG---------AGGCTGGGAATGGAGACCT--CATGCTGC---------- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I a score=649942.000000 s hg38.chr20_KI270870v1_alt 90400 103 + 183433 GCAGATGCTGGACCTAGTATTTCTGCTGCCTCCTC-------CAGGAGCCATGTGACATGGATGTGAGTCTGTTTGCCTCCTAGGGCCTTACCTTCCTATGTCTGGGGG--T s panTro5.chr20 66415092 103 + 66533130 GCAGATGCTGGACCTAGTTCTCCTGCTGCCTCCTC-------CAGGAGTCATGTGACATGGATGTGAGTCTGTTTGCCTCCTAGGGCCTTCCCTTCCTATGTCTGGGGG--T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092090 103 + 62195757 GCAGATGCTGGACCTAGTTCTCCTGCTGCCTCCTC-------CAGGAGTCATGTGACATGGATGTGAGTCTGTTTGCCTCCTAGGGCCTTCCCTTCCTATGTCTGGGGG--T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 480910 103 - 578057 ACAGATGCTGGACCTAGCTCTTCTGCTGCCTCCTC-------CAGGAGCCATGTGACATGGATGTGAGTCTGTTTGCCTCCTAGGGCCTTACCTTCCTATGTCTGGGGG--T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110005947 103 - 110113093 AGAGATGCTGGACCTAGTTCTTCTGCTGCCTCCTC-------CAGGAGCCATGTGACATAGATGTGAGTCTGTTTGCCTCCTAGTGCCTTACCTTCCCATGTCTGGGGG--T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92731655 103 - 92844088 ACAGATGCTGGACCTAGTTCTTCTGCTGCCTCCTC-------CAGGAGCCATGTGACATGGATGTGAGTCTGTTTGCTTCCTGGGGCCTTACCTCCCCATGTCTGGGGG--T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96399637 103 + 96509753 ACAGATGCTGGACCTAGTTCTTCTGCTGCCTCCTC-------CAGGAGCCATGTGACATGGATGTGAGTCTGTTTGCCTCCTGGGGCCTTACCTCCCCATGTCTGGGGG--T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870620 103 - 16982598 ACAGATGCTGGACCTAGTTCTTCTGCTGCCTCCTC-------CAGGAGCCATGTGACATGGATGTGAGTCTGTTTGCCTCCTGGGGCCTTACCTCCCCATGTCTGGGGG--T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672310 103 - 3785965 ACAGATGCTGGACCTAGTTCTTCTGCTGCCTCCTC-------CAGGAGCCATGTGACATGGATGTGAGTCTGTTTGCCTCCTGGGGCCTTACCTCCCCATGTCTGGGGG--T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57127 103 - 179258 ACAGATGCTGGACCTAGTTCTTCTGCTGCCCCCTC-------CAGGAGCCATGTGACATGGATGTGAGTCTGTTTGCCTCCTGGGGCCTTACCTCCCCATGTCTGGGGG--T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542696 90 - 5823884 ACAGATGCTGGACCTAGTTCTGCTGCTGCCTCCTC-------CAGGAGCCATTTGACATGGATGTGAGTCTGTTTGCCTCCTAGGGCCTTACCTCCC--------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 25858 81 + 372756 ACAGA------------------TGCGGCCTCCTC-------CAGGAGCCGTGTGGCATGGA--TGAGTCTGTTTGCCTCTGAGGG-CTCACCTTCCCCTGTCTGGGGG--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263275 81 + 16356641 ACAGA------------------TGTGGCCTCTTC-------CAGGAGCCGTGTGGCATGGA--TGAGTCCGTTTGCCTCTGAGGG-CACACCTTCCCATGTCTGGGGG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132383 88 + 1231380 ACAGA------------------TGTGGCCTCCTCCACATGACAGGAGCCGTGTGGCATGGA--TGAGTCTGTTTGCCTCTGAGGG--TCACCTTCCCATGTCTGGGGGC-- i cebCap1.NW_016107870v1 C 0 I 7 s aotNan1.NW_018500483v1 2662572 81 + 11732439 ACAGA------------------TGCGGCCTCCTC-------CAGGAGCCGTGTGGCATGGA--TGAGTCCGTTCGCCTCTGAGGG--CCACCTTCCCACGTCTGGGGG-C- i aotNan1.NW_018500483v1 C 0 I 6 s otoGar3.GL873542 22826812 39 + 22939663 ----AGGGTGCACCTGGCTCTCCTATTGCTTTCTC-------TGGGAGCC-------------------------------------------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47588478 87 + 47698779 ----------GTGCTAGACTGCCTTCTGCAGGCCC-------TGGGAGCCATGTGACGTGG------GTCTTCATGCCCCCGAGGACCTCGACTTCTTGTCTCTGGAGG--C i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 225681 84 - 397369 -CAAGCCCTGGGCCTGCTTCTCTGGCCACCACCTC-------TGGATGC--TGCGGTATGGG--TGTGCCTG------TCCCAGG----CTCGTCCTCAAGTGGGA------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1839394 121 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I a score=99171.000000 s hg38.chr20_KI270870v1_alt 90503 26 + 183433 GTAGCCTGGACCTCAGGGGTGTCCCC s panTro5.chr20 66415195 26 + 66533130 GCAGCCTGGACCTCAGGGGTGTCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092193 26 + 62195757 GCAGCCTGGACCTCAGGGGTGTCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481013 26 - 578057 GCAGCCTGGACCTCAGGGGTGTCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006050 26 - 110113093 GCAGCCTGGACCTCAGGGGTGTCACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92731758 25 - 92844088 GCAGCCTGGACCTC-GGGGTGTCACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96399740 25 + 96509753 GCAGCCTGGACCTC-GGGGTGTCACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870723 25 - 16982598 GCAGCCTGGACCTC-GGGGTGTCACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672413 25 - 3785965 GCAGCCTGGACCTC-GGGGTGTCACC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57230 25 - 179258 GCAGCCTGGACCTC-GGGGTGTCACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542786 22 - 5823884 ----CCTGGACCTCAGGGGTGTCACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 25939 5 + 372756 ---------------------CCATG i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16263356 5 + 16356641 ---------------------CCACG i saiBol1.JH378156 C 0 I 2 s canFam3.chr24 47588565 18 + 47698779 ACAGTCTGGACCT--GGGCT------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 225765 20 - 397369 ACAGTCTGGACCTCAGGATC------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1839394 121 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e cebCap1.NW_016107870v1 1132471 7 + 1231380 I e aotNan1.NW_018500483v1 2662653 6 + 11732439 I e otoGar3.GL873542 22826851 0 + 22939663 C a score=6126.000000 s hg38.chr20_KI270870v1_alt 90529 1 + 183433 T s panTro5.chr20 66415221 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092219 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481039 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006076 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92731783 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96399765 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870748 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672438 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57255 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542808 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 25946 1 + 372756 T i calJac3.chrUn_GL286459 I 2 C 0 s saiBol1.JH378156 16263363 1 + 16356641 G i saiBol1.JH378156 I 2 C 0 s aotNan1.NW_018500483v1 2662659 1 + 11732439 T i aotNan1.NW_018500483v1 I 6 C 0 s otoGar3.GL873542 22826851 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47588583 1 + 47698779 C i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1839394 121 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 225785 0 - 397369 C e cebCap1.NW_016107870v1 1132471 7 + 1231380 I a score=-8973.000000 s hg38.chr20_KI270870v1_alt 90530 7 + 183433 T------------------------------------------GGGTGT s panTro5.chr20 66415222 7 + 66533130 T------------------------------------------GGGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092220 7 + 62195757 T------------------------------------------GGGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481040 7 - 578057 C------------------------------------------GGGTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006077 7 - 110113093 T------------------------------------------GCGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92731784 49 - 92844088 TGGGTGTCAGAGGCTCTTTGAGGGGGTGCAGCCTGGACCTCAGGGGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96399766 49 + 96509753 TGGGTGTCAGAGGCTCTTTGAGGGGGTGCAGCCTGGACCTCAGGGGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870749 49 - 16982598 TGGGTGTCAGAGGCTCTTTGAGGGGGTGCAGCCTGGACCTCAGGGGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672439 49 - 3785965 TGGGTGTCAGAGGCTCTTTGAGGGGGTGCAGCCTGGACCTCAGGGGTGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57256 48 - 179258 TGGGTGTCAGAGGCTCTTTGAGGGGGTGCAGCCTGGACCTC-GGGGTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542809 7 - 5823884 T------------------------------------------GGGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 25947 7 + 372756 ------------------------------------------TGGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263364 7 + 16356641 ------------------------------------------TGGGCGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132478 7 + 1231380 ------------------------------------------TGGGCGT i cebCap1.NW_016107870v1 I 7 C 0 s aotNan1.NW_018500483v1 2662660 7 + 11732439 ------------------------------------------TGGGTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22826852 7 + 22939663 ------------------------------------------TGGGTGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47588584 6 + 47698779 ------------------------------------------TGGGTT- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1839394 121 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I e dasNov3.JH569290 225785 0 - 397369 C a score=623686.000000 s hg38.chr20_KI270870v1_alt 90537 61 + 183433 CAGAGGCTCTTTGGGACTAGAGGGAGGAATCCTGGGCTGTGGT-CC--CCCAGGAGTCTACTGT s panTro5.chr20 66415229 59 + 66533130 CAG--GCTCTTTGGGTCTAGAGGGAGGAATCCTGGGCTGTGGT-CC--CCCAGGAGTCTACTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092227 59 + 62195757 CAG--GCTCTTTGGGTCTAGAGGGAGGAATCCTGGGCTGTGGT-CC--CCCAGGAGTCTACTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481047 60 - 578057 CAGAGGCTCTTTGGGTCTAGAGGGAGG-ACCTAGGGCTGTGGT-CC--CCCAGGAGTCTACTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006084 60 - 110113093 CAGAGGCTCTTTGGGTCTAGAGAGAGA-ATCCTGGGCTGTGGT-CC--CCCAGGAGTCTACTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92731833 61 - 92844088 CAGAGGCTCTTTGGGTCTAGAGAGCGGAATCCTGGGCTGTGGT-CC--CCCAGGAGTCTACTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96399815 61 + 96509753 CAGAGGCTCTTTGGGTCTAGAGAGCGGAATCCTGGGCTGTGGT-CC--CCCAGGAGTCTACTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870798 61 - 16982598 CAGAGGCTCTTTGGGTCTAGAGAGCGGAATCCTGGGCTGTGGT-CC--CCCAGGAGTCTACTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672488 61 - 3785965 CAGAGGCTCTTTGGGTCTAGAGAGCGGAATCCTGGGCTGTGGT-CC--CCCAGGAGTCTACTGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57304 61 - 179258 CAGAGGCTCTTTGGGTCTAGAGAGCGGAATCCTGGGCTGTGGT-CC--CCCAGGAGTCTACTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542816 62 - 5823884 CAGAGGCTCTTTGGGTCTAGAGAGCGGAATCCTGGGCTGTGGTCCC--CCCAGGAGTCTACTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 25954 61 + 372756 CAGAGGCTC-TTGGGTCTAGAGAGGGGAAGCCTGGGCTGTGGT-GCT-CCCAAGAGTCTCCTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263371 59 + 16356641 CAGAGGCTCTTTGGGTCTAGAGA---GAAGCCTGGGCTGTGGT-CCT-CCCAAGAGTCTACTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132485 63 + 1231380 CAGAGGCTCTTTGGGTCTAGAGAGGGGAAGCCTGGGCTGTGGT-CCTCCCCAAGAATCTACTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2662667 59 + 11732439 CAGAGGCCT-TCGGGTCTAGAGAGGGGAAGCCTGGGCTGT-GT-CCT-CCC-AGAGTCTACTGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1839515 62 - 2029793 CAGAGGCTCTCTGGGTCCAGAGGGGGCAATTCTGGGTTGTGGT-CCC-CCCAGGAGTCTACTTT i proCoq1.NW_012150197v1 I 121 C 0 s otoGar3.GL873542 22826859 62 + 22939663 CAGAGGCTCTCTAGGTCTACAGAATAGAATTCTGGGTTGTGGT-TCC-CCCCAAAGTCTACTTT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47588590 62 + 47698779 CAGAGATTCTCTGGGTCTAGAGGGTGAAATTCTGGGCTGTGAT-CCC-CCCAGGTACCTACTGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 225785 27 - 397369 -----------------------------TCCTGGGTTCTGGG-CC--AC-----ATCTGCTGT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56843250 3086 + 57149010 I a score=491285.000000 s hg38.chr20_KI270870v1_alt 90598 42 + 183433 GACCTGTG-ACTGGTTTCGTGTGGGCCTTAAATTGTTTCTAAA s panTro5.chr20 66415288 42 + 66533130 GACCTGCG-ATGGGTTTCGTGTGGGCCTTACATTGTTTCTAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092286 42 + 62195757 GACCTGCG-ATGGGTTTCGTGTGGGCCTTACATTGTTTCTAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481107 42 - 578057 GACCTGTG-ATTGGTTTCGTGTGGGCCTTAAATTGTTTCTAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006144 42 - 110113093 GACCTGTG-ATTGGTTTCGTGCGGGCCTTAAATTGTTTCTAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92731894 42 - 92844088 GACCTGTG-CTTGGTTTCGTGCGGGCCTTAAATTGTTTCTAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96399876 42 + 96509753 GACCTGTG-CTTGGTTTCGTGCGGGCCTTAAATTGTTTCTAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870859 42 - 16982598 GACCTGTG-CTTGGTTTCGTGAGGGCCTTAAATTGTTTCTAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672549 42 - 3785965 GACCTGTG-CTTGGTTTCGTGCGGGCCTTAAATTGTTTCTAAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57365 42 - 179258 GACCTGTG-CTTGGTTTCGTGCGGGCCTTAAATTGTTTCTAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542878 42 - 5823884 GACCTGTG-ACTGGTTCCGTGCGGGCCTTAAATTGTTTCTAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26015 42 + 372756 GACCTGTG-GTTGGTTTTGTACAGGCCTTAAGTGGTTTCTAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263430 42 + 16356641 GACCTGTG-GTTGGTTTTGTACAGGCCTTAAATGGTTTCTAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132548 42 + 1231380 GACCTGTG-GTTGGTTTTGCACAGGCCTGAAATGGTTTCTAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2662726 42 + 11732439 GACCTGTG-CTTGCTTTTGCACAGGCCTTAAATGGCGTCTAAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56846336 42 + 57149010 GACCTGTG-GCCGGTTTTGTGAGGGCCTTAGACTGCTCCTACA i micMur3.chr18 I 3086 C 0 s proCoq1.NW_012150197v1 1839577 42 - 2029793 GACCTGTG-GCCGGTTTTGTGAGGGCCTTGAATTGTTCCTACG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22826921 42 + 22939663 GACTTGTG-TTTGGTTTTGTGAGGGCCTTAAATTGTTTCTATG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47588652 39 + 47698779 GACAGGTG-GTTAGT---GTGTGCACCTTAAATTATTTCTACA i canFam3.chr24 C 0 I 190 s dasNov3.JH569290 225812 30 - 397369 GGCCTGTGTGTGGGTTTTGTGGAGGCTTTG------------- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I a score=1040456.000000 s hg38.chr20_KI270870v1_alt 90640 88 + 183433 TTTTTATTCTAACCGTTTTCTTGCTGCCTTGCCAGGCTCTGATTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATGAGGGATTGAGA s panTro5.chr20 66415330 88 + 66533130 TTTTTATTCTAACCCTTTTCTTGCTGCCTTGCTAGGCTTTGATTTAAACCCAAGT-AGCAGCAAGAA--------------GTGGATAAATGAGGGATTGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092328 88 + 62195757 TTTTTATTCTAACCCTTTTCTTGCTGCCTTGCTAGGCTTTGATTTAAACCCAAGT-AGCAGCAAGAA--------------GTGGATAAATGAGGGATTGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481149 88 - 578057 TTTTTATTCTAACCCTTTTCTTGCTGCCTTGCTAGGCTTTGATTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATGAGGGATTGAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006186 88 - 110113093 GTTTTATTCTAACCCTTTTCTTGCTGCCTTGCTAGGCTTTGATTTAAACCCAAGT-AGCAGCAAGAA--------------GGAGATAAATGAGGGATTGAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92731936 88 - 92844088 TTTTTATTCTAACCCTTTTCTTGCTGCCTTGCAAGGCTTTAATTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATGGGGAATTGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96399918 88 + 96509753 TTTTTATTCTAACCCTTTTCTTGCTGCCTTGCAAGGCTTTAATTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATGGGGAATTGAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870901 88 - 16982598 GTTTTATTCTAACCCTTTTCTTGCTGCCTTGCAAGGCTTTAATTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATGGGGAATTGAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672591 88 - 3785965 TTTTTATTCTAACCCTTTTCTTGCCGCCTTGCAAGGCTTTAATTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATGGGGAATTGAGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57407 88 - 179258 TTTTTATTCTAACCCTTTTCTTGCTGCCTTGCAAGGCTTTAATTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATGGGGAATTGAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542920 70 - 5823884 TTTTTATTCTAAC------------------CAAGGCTTTAATTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATAGGGAATTGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26057 75 + 372756 TGTGTATCGTAAACCTTTTCTTGGTGCGTTGCTGGGCTTTGCTTTAAACCCAAGT-AGCAGCAAGAA------------------------TAGGGATT---A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263472 88 + 16356641 TTTTTATTGTAACCCTTTTCTTGGTGCCTTGCTAGGCTTTGCTTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATGAGGGATTTAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132590 88 + 1231380 TTTTTATTGTAACCCTTTTCTTGGTGCCTTGCTAGGCTTTGCTTTAAACCCAAGT-AGCAGCAAGAA--------------GGGGATAAATGAGGGATTCAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2662768 88 + 11732439 TTTTTTTTG-AACCCTTTTCTTGGTGCCTTGCTAGGCTTTGCTTTAAACCCAAGTAAGCAGCAAGAA--------------GGGGATAAGCAAGGGATTCAGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56846378 88 + 57149010 TTTTTATCCTAGAGTTGTTCTTCCTGCCTTGCGAGGCTTTGCTTTGAACTTGAGT-AGCAGCAAGGA--------------GGGGATAAATGAGGGATTGAGA i micMur3.chr18 C 0 I 20 s proCoq1.NW_012150197v1 1839619 87 - 2029793 TTTTTATTGTAAACCTGTTCTTCCTGCCTTGCTAGGCTTTGCTTTGAGCTTGAGT-AGCAGCGAGGA---------------GGGATAAACGAGGGATTGAGA i proCoq1.NW_012150197v1 C 0 I 302 s otoGar3.GL873542 22826963 88 + 22939663 TTTTAATTCTAGCCCTGTTCTTCCTGCCTTGCTAGACTTTGTTTTAAACTTGAGT-AGCAGCAAGGA--------------CAGGATAAATGAAGGATTGAGA i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47588881 101 + 47698779 TTTTTATTCCAACTGTTTTGTTCTTGACTTTCTGGGCTTTGCTTTAAGTCTGAGT-GACAGGGAGAAGGCGTGGGAGCTGAGGGGATGGATGAAG-ATTGAGA i canFam3.chr24 I 190 I 1 s dasNov3.JH569290 225842 86 - 397369 -TGCTCTTCTAACCCC-TGCTCCCAGCCTGGCTGGGTGTTACCTTAAATCTGAGC-AGCAGCAAGGA--------------GGGGATGGGTGAGAGATCGAGA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I a score=66887.000000 s hg38.chr20_KI270870v1_alt 90728 35 + 183433 GGAGAAGCAGGAAAAAAGt------------tttttgtttt-----ttgttt s panTro5.chr20 66415418 28 + 66533130 G---AAGCAGGAAAAAAGT------------TTTTTGTTTT-----TT---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092416 30 + 62195757 G---AAGCAGGAAAAAAGT------------TTTTTGTTTT-----TG--TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481237 35 - 578057 GGAGAAGCAGGAAAAAAGt------------tttttgtttt-----ttgttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006274 34 - 110113093 GAAGAAGTAGGAAAAAGTT------------TTTTTGTTTT-----GT-CTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732024 34 - 92844088 GGAGAAGTAGGAAAAAGGTG-----------GTTTTGTTTG-----TT--TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400006 35 + 96509753 GGAGAAGTAGGAAAAAGGTG-----------GTTTTGTTTG----TTT--TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16870989 34 - 16982598 GGAGAAGTAGGAAAAAGGTG-----------GTTTTGTTTG-----TT--TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672679 33 - 3785965 GGAGAAGTAGGAAAAAGGTG-----------GTTTTTTTTG------T--TT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57495 33 - 179258 GGAGAAGTAGGAAAAAGAT------------GTTTTTTTTG-----TT--TT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5542990 50 - 5823884 GGAGAAGTAGGAAAAAGGTAttttttgttttgttttgtttttgttttt--tt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26132 24 + 372756 AGAGAAGTAGGAAGAAT--------------GTTT-----------GT---T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263560 25 + 16356641 GGAGAAGTAGGAAAAAG--------------GTTT-----------TT--CT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132678 25 + 1231380 GGAGAAGTAGGAAAAAG--------------GTTT-----------TT--TT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2662856 27 + 11732439 GGAGAAGTAGGAAAAAGGT------------GTTT-----------TT--TT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22827052 17 + 22939663 GGAAAGTAAGGAAAAAT----------------------------------- i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47588983 35 + 47698779 AAAAAAACAGAAAAGAAAT------------GTTTTTCCTT-----TTATTT i canFam3.chr24 I 1 I 191 s dasNov3.JH569290 225928 16 - 397369 TGACAAGTAGGAAACC------------------------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1839706 302 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56846466 20 + 57149010 I a score=20010.000000 s hg38.chr20_KI270870v1_alt 90763 2 + 183433 tt s panPan2.chr20 62092446 2 + 62195757 TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481272 2 - 578057 tt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006308 2 - 110113093 TT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732058 2 - 92844088 TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400041 2 + 96509753 TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871023 2 - 16982598 TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672712 2 - 3785965 TT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57528 2 - 179258 TT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543040 2 - 5823884 tt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26156 2 + 372756 TT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263585 2 + 16356641 TT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132703 2 + 1231380 TC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2662883 2 + 11732439 TT i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47589209 2 + 47698779 TT i canFam3.chr24 I 191 C 0 s dasNov3.JH569290 225944 2 - 397369 TT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1839706 302 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56846466 20 + 57149010 I e panTro5.chr20 66415446 0 + 66533130 C e otoGar3.GL873542 22827069 0 + 22939663 C a score=1143947.000000 s hg38.chr20_KI270870v1_alt 90765 116 + 183433 tttCCTTTCGAATGGCAAGAT------GTAAGTTTATACTCAA-C-CCTGGGCCCAG---CTTTTCAGT---------------------------------------------------------------------TTCACTCTGCATGAGGTATGATGAAAGCTAAGAAGGCCTGCCCTCT------------------CCAGGGAAGTGG s panTro5.chr20 66415446 115 + 66533130 -TTCCTTTCGAATGACAAGAT------GTAAGTTTATACTCAA-C-CCTGGGCCCAG---CTTTTCAGT---------------------------------------------------------------------TTCACTCTGCATGAGGTATGATGAAAGCTAAGAAGGCCTGCCCTCT------------------CCAGGGAAGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092448 116 + 62195757 TTTCCTTTCGAATGACAAGAT------GTAAGTTTATACTCAA-C-CCTGGGCCCAG---CTTTTCAGT---------------------------------------------------------------------TTCACTCTGCATGAGGTATGATGAAAGCTAAGAAGGCCTGCCCTCT------------------CCAGGGAAGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481274 115 - 578057 tttCCTTTCAAATGGCAAGAT------GTAAGTTTATACTCAA-C-CCT-GGCCCAG---CTTTTCAGT---------------------------------------------------------------------TTCACTCTGCATGAGGTATGATGAAAGCTAAGAAGGCCTGCCCTCT------------------CCAGGGAAGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006310 116 - 110113093 TTTCCTTTCGAATGGCAAGAT------ATAAGTTTATACTCAA-C-CCAGGGCCCAG---CTTTTCCGT---------------------------------------------------------------------TTCACTCTGCATGAGGTATGATGAAAGCTAAGAAGGCCTGCCCTCT------------------CCAGGGAAGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732060 118 - 92844088 TTTGCTTTCGAATGGCAATAT------GTAAGTTTATACTCGA-C-CCGGGGCCCAGCTTCTTTTCAGT---------------------------------------------------------------------TTC-CTCTGCATGAGGTATGATGAAAGCTACGAAGGCCTGCCCTCT------------------CCGGGGACGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400043 118 + 96509753 TTTGCTTTCGAATGGCAATAT------GTAAGTTTATACTCGA-C-CCGGGGCCCAGCTTCTTTTCAGT---------------------------------------------------------------------TTC-CTCTGCATGAGGTATGATGAAAGCTACGAAGGCCTGCCCTCT------------------CCGGGGACGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871025 118 - 16982598 TTTGCTTTCGAATGGCAATAT------GTAAGTTTATACTCGA-C-CCGGGGCCCAGCTTCTTTTCAGT---------------------------------------------------------------------TTC-CTCTGCATGAGGTATGATGAAAGCTACGAAGGCCTGCCCTCT------------------CCGGGGACGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672714 118 - 3785965 TTTGCTTTCGAATGGCAATAT------GTAAGTTTATACTCGA-C-CCGGGGCCCAGCTTCTTTTCAGT---------------------------------------------------------------------TTC-CTCTGCATGAGGTATGATGAAAGCTACGAAGGCCTGCCCTCT------------------CCGGGGAAGTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57530 118 - 179258 TTTGCTTTCGAATGGCAATAT------GTAAGTTTATACTCGA-G-CCGGGGCCCAGCTTCTTTTCAGT---------------------------------------------------------------------TTC-CTCTGCATGAGGTATGATGAAAGCTACGAAGGCCTGTCCTCT------------------CCGGGGAAGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543042 119 - 5823884 tttGCTTTCGAATGGCAATAT------GTAAGTTTATACTCGA-C-CCGGGGCCTAGCTTCTTTTCAGT---------------------------------------------------------------------TTCACTCTGCATGAGGTATGATGAAAGCTAAGAAGGCCTGCCCTCT------------------CCAGGGAAGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26158 116 + 372756 TTTCCTTTGGAGTGGCAAGAT------GTAAGTTTATACAAAA-T-CCAGGGCCCAG---CTGTTCAGT---------------------------------------------------------------------TTCACCCTGCATGAGGTATGATGAAAGCTAAGAAGGCCTGCTCTCT------------------CTGGGGAAGTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263587 116 + 16356641 TTTCCTTTAGAATGGCAAGAT------GTAGGTTTATACTAAA-T-CCAGGGCCCAG---CTGTTCAGT---------------------------------------------------------------------TTCACTCTGCATGAGGGATGATGAAAGCTAAGAAGGCCTGCTCTCT------------------CTGGGGAAGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132705 116 + 1231380 TTTCCTTTAGAATGGCAAAAT------GTAAGTTTATACTAAA-T-CCAGGGCCCAG---CTGTTCAGT---------------------------------------------------------------------TTCACTCTGCATGAGATGTGATGAAAGCCAAGAAGGCCTGCTCTCT------------------CTGGGGAAGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2662885 116 + 11732439 TCTCCTTTAGAATGGCAAGAT------GTAAGTTTACACTAAA-T-CCAGGGCCCAG---CTGTTCAGT---------------------------------------------------------------------TTCACTCTGCATGAGGTACGATGAACGCTAAGAAGGCCTGCTCTCT------------------CTGGGGAAGTAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56846486 117 + 57149010 TTTCCTTTCAAATGGCAAGAT------ATAAGTTTCTGCTCAGTT-CCAGGGCCCAG---CTTTTCCGT---------------------------------------------------------------------TTCACTCTGAATGAGGAGTGATGAGAGCTAAGGAGGCCTTCCCTCA------------------CCAGGGCAGTGG i micMur3.chr18 I 20 I 348 s otoGar3.GL873542 22827069 117 + 22939663 TTTCATTTCAAACAGCAAGAT------GTAAGTTTAAACTCAATT-CTAGGGCCCAG---ATTGCCAAT---------------------------------------------------------------------TTCATTCTGAATAATGTACAATGAAAGCTAAGGAGGCCTGTGTTCT------------------TCAGGGCAGTGG i otoGar3.GL873542 C 0 I 16 s canFam3.chr24 47589211 202 + 47698779 TTTCCTTTTAAATGGCAAAAT------GT--GTTTGTACTCAA-TGCCAGGGCCCAG---CTTTCTAATGGAGAGACTCAGTTCACGGCTTTGAGGTGATGTGGGATGGGTGGGAGCAGGACCAGGCACTGCCAAAGCTTCCCTGTGCACAAGGACGCAGGGAGGCTGAGGATACCCGCCCTCTGCGCTGAGGATACCCGGCCCCAGGCAGCGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 225946 95 - 397369 TTATCCTTCACATGGCAAGATTGTCCCACATCTTCGTACGGGAGT-CCAGGACCAAG---CTCTCCAAT---------------------------------------------------------------------GCC-----------------------------AACGTTCGGCCTCT---------------GGCTTTGAGGGGT-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1839706 302 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I a score=463223.000000 s hg38.chr20_KI270870v1_alt 90881 51 + 183433 CGGCTGGAGC-AGCCA------CGGTGTCCCAGGGCGTGGCAGGCCCAGCCAATACGC s panTro5.chr20 66415561 51 + 66533130 CGGCTGGAGC-AGCCA------CGGTGTCCCAGGACGTGGCAGGCCCAGCCAATACGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092564 51 + 62195757 CGGCTGGAGC-AGCCA------CGGTGTCCCAGGACGTGGCAGGCCCAGCCAATACGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481389 51 - 578057 CGGCTGGAGC-AGCCA------CGGTGTCCCAGGACGTGGCAGGCCCAGCCGATGCGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006426 51 - 110113093 CGGCTGGAGC-AGCCA------CAGTGTCCCAGGACGTGGCAGGTCCAGCCAATGCGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732178 51 - 92844088 CAGCTGGAGC-AGCCA------CAGTGTCCCAGGACGTGGCAGGCCCAGCCGACGCGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400161 51 + 96509753 CAGCTGGAGC-AGCCA------CAGTGTCCCAGGACGTGGCAGGCCCAGCCGACGCGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871143 51 - 16982598 CAGCTGGAGC-AGCCA------CAGTGTCCCAGGACGTGGCAGGCCCAGCCAACGCGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672832 51 - 3785965 CAGCTGGAGC-AGCCA------CAGTGTCCCAGGACGTGGCAGGCCCAGCCAACGCGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57648 51 - 179258 CAGCTGGAGC-AGCCA------CAGTGTCCCAGGACGTGGCAGGCCCAGCCAACGCGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543161 51 - 5823884 CAGCTGGAGC-AACCA------CAGTGTCCCAGGACGTGGCAGGCCCAGCCAACGTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26274 51 + 372756 CAGCTGGAGC-AGCCA------CAGTGTCCTAGGATGTGGCAGGCCCAGCCATTGCAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263703 51 + 16356641 CAGCCGGAGC-GGCCA------CAGTGTCCCAGGGTGTGGCAGGCCCAGCCAATGCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132821 50 + 1231380 CAGC-GGAGC-AGCCA------CAGTGTCTCAAGATGTGGCAGGCCCAGCCATTGCGC i cebCap1.NW_016107870v1 C 0 I 16 s aotNan1.NW_018500483v1 2663001 49 + 11732439 CAGCCGGAGC-AGC--------CAGTGTCCCAGGATGTGGCAGGCCCAGCCACTGCTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22827202 46 + 22939663 TGGCTAGAGC-AGCCA------CAGTGTCCTGGGACATTGCAGACCGAGCAGG----- i otoGar3.GL873542 I 16 C 0 s canFam3.chr24 47589413 42 + 47698779 TGGCTGGAGCTGGCCACTCGCTCGGTGGCCCCGG---TGACACAC------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 226041 41 - 397369 CTTCATGAGT-GGCCG------CGGCATCCTGGGCTCTGGCAGTACTC---------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1839706 302 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56846603 348 + 57149010 I a score=13800.000000 s hg38.chr20_KI270870v1_alt 90932 3 + 183433 ACG s panTro5.chr20 66415612 3 + 66533130 ACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092615 3 + 62195757 ACG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481440 3 - 578057 ACG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006477 3 - 110113093 ACG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732229 3 - 92844088 ACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400212 3 + 96509753 ACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871194 3 - 16982598 ACG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672883 3 - 3785965 ACG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57699 3 - 179258 ACG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543212 3 - 5823884 ACG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26325 3 + 372756 ATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263754 3 + 16356641 GTG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2663050 3 + 11732439 ACG i aotNan1.NW_018500483v1 C 0 I 13 s otoGar3.GL873542 22827248 1 + 22939663 --G i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47589455 1 + 47698779 A-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 226082 3 - 397369 GTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1839706 302 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56846603 348 + 57149010 I e cebCap1.NW_016107870v1 1132871 16 + 1231380 I a score=89874.000000 s hg38.chr20_KI270870v1_alt 90935 23 + 183433 CACAGGCAGAATGGGGGGCTGTT s panTro5.chr20 66415615 23 + 66533130 CACAGGCAGAATGGGGGGCTGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092618 23 + 62195757 CACAGGCAGAATGGGGGGCTGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481443 22 - 578057 CACAGGCAGAAT-GGGGGCTGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006480 23 - 110113093 AACAGGCAGAATGGGGGGTTGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732232 23 - 92844088 CACAGGCAGAACGGGGGGCTGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400215 23 + 96509753 CACAGGCAGAACGGGGGGCTGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871197 23 - 16982598 CACAGGCAGAACGGGGGGCTGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672886 23 - 3785965 CATAGGCAGAACGGGGGGCTGTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57702 23 - 179258 CACAGGCAGAACGGGGGGCTGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543215 23 - 5823884 CACAGGCAGAATGGGGGGCTGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26328 6 + 372756 -------A----------ATGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263757 16 + 16356641 -------AACCTGGGGCCATGCT i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22827249 21 + 22939663 CACAGGTAGAGC-AGGCATCGT- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47589456 10 + 47698779 -------------GGAAGCTGCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 226085 22 - 397369 TCCCAGTAGACCGTGGAGAGGT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1839706 302 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56846603 348 + 57149010 I e cebCap1.NW_016107870v1 1132871 16 + 1231380 I e aotNan1.NW_018500483v1 2663053 13 + 11732439 I a score=744062.000000 s hg38.chr20_KI270870v1_alt 90958 96 + 183433 GCTGCTGGGTTAGCTAC--------CAGGTGGGATTGGCCCTGGCCATCGGCTCAGCTGCATGGATAGCTGTGGACACATCCTGACATAGC------------------------------------ACTGGCCGAGGTG s panTro5.chr20 66415638 96 + 66533130 GCTGCTGGGTTAGCTAC--------CAGGTGGGATTGGCCCTGGCCATCGGCTCAGCTGCATGGATAGCTGTGGACACATCCTGACATAGC------------------------------------ACTGGCCGAGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092641 96 + 62195757 GCTGCTGGGTTAGCTAC--------CAGGTGGGATTGGCCCTGGCCATCGGCTCAGCTGCATGGATAGCTGTGGACACATCCTGACATAGC------------------------------------ACTGGCCGAGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481465 96 - 578057 GCTGCTGGGTTAGCTAC--------CAGGTGGGATTGGCCCTGGCCATCGGCTCAGCTGCAGGGATAGCTGTGGACACATCCTGACATAGC------------------------------------ACTGGCCGAGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006503 96 - 110113093 GCTGCTGCATTAGCTAC--------CAGGTGGGATTGGCCCTGGCCATCGGTGCAGCTGCATGGATAGCTGCTGACACATCCTGACATAGC------------------------------------ACTGGCCGAGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732255 94 - 92844088 GCTGCTGGGTTAGCTAC--------CAGGTGGGATCGGCCCTGGCCATCGGCTCAGCTGCATGGATAGCTGCTGACACATCCTG--ACAGC------------------------------------GCTGGCCAAGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400238 94 + 96509753 GCTGCTGGGTTAGCTAC--------CAGGTGGGATCGGCCCTGGCCATCGGCTCAGCTGCATGGATAGCTGCTGACACATCCTG--ACAGC------------------------------------GCTGGCCAAGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871220 94 - 16982598 GCTGCTGGGTTAGCTAC--------CAGGTGGGATCGGCCCTGGCCATCGGCTCAGCTGCATGGATAGCTGCTGACACATCCTG--ACAGC------------------------------------GCTGGCCAAGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3672909 96 - 3785965 GCTGCTGGGTTAGCTAC--------CAGGTGGGATTGGCCCTGGCCATCGGCTCAGCTGCATGGATAGCTGCTGACACATCCTGACACAGC------------------------------------GCTGGCCAAGGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57725 96 - 179258 GCTGCTGGGTTAGCTAC--------CAGGTGGGATCGGCCCTGGCCATCGGCTCAGCTGCATGGATAGCTGCTGGCACATCCTGACACAGC------------------------------------GCTGGCCAAGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543238 96 - 5823884 GCTACTGGGTTAGCTAC--------CAGGTGGGATCGGCCCTGGCCATCGGCTCAGCTGCATGGATAGCTGCTGACACATCCTGACATAGC------------------------------------ACTGGCCAAGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26334 91 + 372756 ---GCTG-GTTGGTTAC--------TAGGTGGGATTGGCCCTGGCC-TCAGCTCAGCTGCCCGGAGAGCTGTGGGCACATCCTGACAGAGC------------------------------------CCTGGTGGAGGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263773 127 + 16356641 ---GCTG-GTTGGTTAC--------TAGGTGGGATTGGCCCCAGCC-TCGGCTCAGCTGCCCGGAGAGCTGTGGGCACATCCTGACAGAGCCCTGGTGCAGGTGGGAGGTGCACATCCTGACAGAGGCCTGGTGCAGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132887 94 + 1231380 GCTGCTG-GTTGGTGAC--------TAGGTGGGATTGGCCCCGGCC-TCGGCTCAGCTGCCCGGAGAGCTGTGGGCACCTCCTGACGGAGC------------------------------------CCTGGTGCAGGTG i cebCap1.NW_016107870v1 I 16 C 0 s aotNan1.NW_018500483v1 2663066 94 + 11732439 GCTGCTG-GTTGGTTAC--------TAGGTGGGATTGGCCCCGGCC-TCGGCTCAGCTGCCCGGAGAGCGGTGGGCACATCCTGACAGAGC------------------------------------CCTGGTGGAGGTG i aotNan1.NW_018500483v1 I 13 C 0 s otoGar3.GL873542 22827270 95 + 22939663 GCTG-TGGGCTAGCTGT--------CTGGCAGGATCGCCTGCACACCTTAGCTCAGCTGCACAATTAGCTGCTGACATACCCTGACATGGC------------------------------------CCTAGCAGATATG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47589466 72 + 47698779 ---GTTG-GTTAGTCGCGGTCGGGGCAGGGGGGAGAG-----------CGACGGAGCCATAC----AGCTGCCCCTGCATCCTGCTGTATC------------------------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 226107 79 - 397369 GCAGCTGGGCTCGTCGT--------CAGCTTGAATTGCCC-------TGAGGTCGTCCGTGTGGTTAGGGGCTGACCCATCCTGTTGTGAA------------------------------------GCC---------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1839706 302 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56846603 348 + 57149010 I a score=322635.000000 s hg38.chr20_KI270870v1_alt 91054 44 + 183433 GGAGGTGAGC-TTGGGCCGTTCTGGGTCCCGATGCCTCCT--GGCTG--------- s panTro5.chr20 66415734 44 + 66533130 GGAGGTGAGC-TTGTGCCGTTCTGGGTCACGATGCCTCCT--GGCTG--------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092737 44 + 62195757 GGAGGTGAGC-TTGTGCCGTTCTGGGTCACGATGCCTCCT--GGCTG--------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481561 44 - 578057 GGAGGTGAGC-TTGTGCCGTTCTGGGTCACGATGCCTCCT--GGCTG--------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006599 44 - 110113093 GGAGGTGAGC-TTGTGCTGTTCTGGGTCACGATGCCTCCT--GGCTG--------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732349 43 - 92844088 GGAGGTGAGC-TTGAGTCACG-ACGGTCACAACGCCTCCT--GGCTG--------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400332 43 + 96509753 GGAGGTGAGC-TTGAGTCACG-ACGGTCACGACGCCTCCT--GGCTG--------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871314 42 - 16982598 GGAGGTGAGC-TTGAGTCAC--ACGGTCACGACGCCTCCT--GGCTG--------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673005 41 - 3785965 GGAGGTGAGC-TTGAGTCACG-ACAGTCACGATGCCTCC----GCTG--------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57821 43 - 179258 GGAGGTGAGC-TTGAGTCACG-ACGGTCACGACGCCTCCT--GGCTG--------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543334 38 - 5823884 GGAGGTGAGC-TTGTGC------TGGTCACGACGCCTCCT--GGCTG--------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26425 43 + 372756 GGAGGTGAGC-TGCTGCTGTTCTGGGTCACGAC-TCTCCT--GGCTG--------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263900 43 + 16356641 GGAGGTGCGC-TGCTGCTGTTCTGGGTCACGAC-TCTCCT--GGCTG--------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1132981 43 + 1231380 GGAGGCGCGC-TGCTGCTGTTCTGGGTCACGAC-TCTCCT--GGCTG--------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2663160 42 + 11732439 GGAGGTGAGC-TG-TGCTGTTCTGGGTCACGAC-TCTCCT--GGCTG--------- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1840008 44 - 2029793 GGAGATGAGT-TTGTGCTGTTCCGGGTCACGATGCCTCCT--GGCTG--------- i proCoq1.NW_012150197v1 I 302 I 3411 s otoGar3.GL873542 22827365 44 + 22939663 CGAGGTGAGT-TTGTGCTGTTCTGGGTCACGATGCCTCCT--GGGTG--------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47589538 30 + 47698779 --------------TGCTCCC-TGGCTCACGATGCCTCCT--GGCTG--------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 226186 55 - 397369 AGGGCTGTGTGTTGTGCCATT-TATTTCATGATGCCACCTCCGGCCACCTTGTGGG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56846603 348 + 57149010 I a score=86312.000000 s hg38.chr20_KI270870v1_alt 91098 10 + 183433 TGCAGAGGCA s panTro5.chr20 66415778 10 + 66533130 TGCAGAGGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092781 10 + 62195757 TGCAGAGGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481605 10 - 578057 TGCAGAGGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006643 10 - 110113093 CACAGAGGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732392 10 - 92844088 CACAGAGGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400375 10 + 96509753 CACAGAGGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871356 10 - 16982598 CACAGAGGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673046 10 - 3785965 CACAGAGGCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57864 10 - 179258 CACAGAGGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543372 10 - 5823884 CACAGAGGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26468 9 + 372756 CACAGAGGC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263943 9 + 16356641 CACAGAGGC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133024 9 + 1231380 CACGGAGGC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2663202 9 + 11732439 CACAGAGGT- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22827409 10 + 22939663 CACAGAAGCA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47589568 10 + 47698779 CACTGAGGTG i canFam3.chr24 C 0 I 298 s dasNov3.JH569290 226241 10 - 397369 CACAGAAGTA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56846603 348 + 57149010 I a score=1198357.000000 s hg38.chr20_KI270870v1_alt 91108 141 + 183433 GGTCGCCTTCCTTTG-----GCCCTG---TTGAATGAGTACAGCTCTAACTGCTCTGGGGAGTGGGAGGGTGAAGTGGACCCAAGAGCTCTCACTCTGA----CCTCCGTGGCCTGTCTCGTGTCACTCGCATGACCCATCCTCCTGTTGTAT s panTro5.chr20 66415788 141 + 66533130 GGTCGCCTTCCTTTG-----GCCCTG---TTGAATGAGTACAGCTCTAACTGCTCTGAGGAGTGGGAGGGTGAAGTGGACCCAAGAGCTCTCACTCTGA----CCTCCGTGGCCTGTCTCATGTCACTCGCATGACCCATTCTCCTGTTGTAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092791 141 + 62195757 GGTCGCCTTCCTTTG-----GCCCTG---TTGAATGAGTACAGCTCTAACTGCTCTGGGGAGTGGGAGGGTGAAGTGGACCCAAGAGCTCTCACTCTGA----CCTCCGTGGCCTGTCTCATGTCACTCGCATGACCCATTCTCCTGTTGTAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481615 141 - 578057 GGTCGCCTTCCTTTG-----GCCTTG---TTGAATGAGTACAGCTCTAACTGCTCTGGGGAGTGGGAGGGTGAAGTGGACCCAAGAGCTCTCACTCTGA----CCTCCATGGCCTGTCTCATGTCACTCGCATGACCCATTCTCCTGTTGTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006653 141 - 110113093 GGTCACCTTCCTTTG-----GCATTG---TTGAATGAGTACAGCTCTAACTGCTCTGGGGAGTGGGAGGGTGCAGTGGACCCAAGAACTCTCACTCTGA----CCTCCATGGCCTGTCTCATATCACTCGCATGACCCATTCTCCTGTTGTAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732402 141 - 92844088 GGTCGTCTGCCTTTG-----GCCTCG---TTGAACGAATACAGCGCTGACTGCTCTGGGGAGTGGGAGGGTGAAGTAGACCCAACAGCTCTCACTCTGA----CCTCCATGGCCTGTCTCATGTCGCTCGCATGACCCATTCTCCTGCTGTAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400385 141 + 96509753 GGTCGTCTGCCTTTG-----GCCTCG---TTGAACGAATACAGCGCTGACTGCTCTGGGGAGTGGGAGGGTGAAGTAGACCCAACAGCTCTCACTCTGA----CCTCCATGGCCTGTCTCATGTCGCTCGCATGACCCATTCTCCTGCTGTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871366 141 - 16982598 GGTCGCCTGCCTTTG-----GCCTCG---TTGAACGAATACAGCGCTGACTGCTCTGGGGAGTGGGAGGGTGAAGTAGACCCAACAGCTCTCACTCTGA----CCTCCATGGCCTGTCTCATGTCGCTCGCATGACCCATTCTCCTGCTGTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673056 141 - 3785965 GGTCGCCTTCCTTTG-----GCCTCG---TTGAACGAATACAGCGCTGACTGCTCTGGGGAGTGGGAGGGTGAAGTAGACCCAACAGCTCTCACTCTGA----CCTCCATGGCCTGTCTCATGTCGCTCGCATGACCCATTCTCCTGCTGTAT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 57874 141 - 179258 GGTCGCCTTCCTTTG-----GCCTCG---TTGAACGAATACAGCGCTGACTGCCCTGGGGAGTGGGAGGGTGAAGTGGACCCAACAGCTCTCACTCTGA----CCTCCATGGCCTGTCTCATGTCGCTCGCATGACCCATTCTCCTGCTGTAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543382 140 - 5823884 GGTCGCCTTCCTTTG-----GCCTTG---TTGAATGAATACAGCTCTGACTGCTCTGGGGAGTGGGAGGGTGAAGTAGACCCAAGAGCT-TCACTCTGA----CCTCCATGGCCTGTCTCAGGTCACTCGCATGACCCGTTCTCCTGCTGTAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26477 140 + 372756 AGTTGCCTTCCTTTG-----GCTCTG---TTGGATGAGTACAGCCCTAACTGCCCTGGGGAGCGGGAGGGTGAAGTGGA-CCAGGGGTTCTCACTCTGA----CCTCCATGGCCTGTCTCCTGCCACTAGCATTACCCATTCTCCTGTTGTAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16263952 140 + 16356641 GGTCGTCTTCCTTTG-----GCCCTG---TTGGAGGAGTACAGCCCTAACTGCTCTGGGGAGCGGGAGGGTGAAGTGGA-CCAGGGGCTCTCGCTCTGA----CCTCCATGGCCTGTCTCCTGTCACGAGCATTATCCATTCTCCTGCCGTAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133033 140 + 1231380 GGTCGCCTTCCTTTG-----GCCCTG---TTGGATGAGTACAGCCCTAACTGCTCTGGGGAGCGGGAGGGTGTAGTGGA-CCAGGGGCTCTCACTCTGA----CCTCCATGGCCTGTCTCCTGTCACTAGCATTACCCATTCTCCTGCTGTAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2663211 140 + 11732439 GGTCGCCTTCCTTTG-----GCCCTG---TTGGATGAGTACAGCCCTAACTGCTCTGGGGAGCGGGAGGGTGAAGTGGA-CAAGGGGCTCTCACTCTGA----CCTCTATGGCCCGTCTCCTGTCACTACCATTACCCATTCTCCTGCTGTAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22827419 114 + 22939663 GCCTG-------------------TG---TTGACCACGTACAGCTGTTACTACCTGAGGG---GAGAGTGGGATGTGGGTCTGGGAGACCTCACCCTTC----CCTTCGTGGCCTGGCCCACATCACTGCCACCACCTATATT---------- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 226251 131 - 397369 -GCTGCTTTTGCTTGTCTGAGCCTTGGCTTGGTCCGTGGGCAAGACCACCTGTGTTG------------GCTGAGTGTAGCCA-CAGCTTGGACACCGAGAAGCCTCTGTGGCCTGTCCTGCGTAACTCAC---CACCATCCCCATGT----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e canFam3.chr24 47589578 298 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56846603 348 + 57149010 I a score=578003.000000 s hg38.chr20_KI270870v1_alt 91249 69 + 183433 CCCTGGACCCAGCCCTCCCTGGCCTCCA--------------------GGAGCAGGGAGTGATA-GGCA-T-CAAGGTGGTCCAGTTTGGGG s panTro5.chr20 66415929 69 + 66533130 CCCTGGACCCAGCCCTCCCTGGCCTCCA--------------------GGAGCAGGGAGTGATA-GGCA-T-CAAGGTGGTCCAGCTTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62092932 69 + 62195757 CCCTGGACCCAGCCCTCCCTGGCCTCCA--------------------GGAGCAGGGAGTGATA-GGCA-T-CAAGGTGGTCCAGCTTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481756 69 - 578057 CCCTGGACCCAGCCCTCCCTGGCCTCCA--------------------GGAGCAGGGAGTGATA-GGCA-T-CAAGGTGGTCCAGCTTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006794 70 - 110113093 CCCTGGACCCAGCCCTCCCTGGCCTCCA--------------------GGAGCAAGGAGTGACA-GGCA-TCCAAGGTGGTCCAGCTTGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732543 53 - 92844088 CCCTGGAC-----------------CCA--------------------GGAGCAAGGAGTGACA-GGTA-TCCAAGGTGGTCCAGCTTGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400526 53 + 96509753 CCCTGGAC-----------------CCA--------------------GGAGCAAGGAGTGACA-GGTA-TCCAAGGTGGTCCAGCTTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871507 53 - 16982598 CCCTGGAC-----------------CCA--------------------GGAGCGAGGAGTGACA-GGTA-TCCAAGGTGGTCCAGCTTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673197 53 - 3785965 CCCTGGAC-----------------CCA--------------------GGAGCAAGGAGTGACA-GGTA-TCCAAGGTGGTCCAGCTTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58015 53 - 179258 CCCTGGAC-----------------CCA--------------------GGAGCAAGGAGTGACA-GGTA-TCCAAGGTGGTCCAGCTTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543522 53 - 5823884 CCCTGGAC-----------------CCA--------------------GGAGCAAGGAGTGACA-GGTA-TCCAAGGTGGTCCAGCTTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26617 69 + 372756 CCCTGGACCTGGCCCTCCCTGGCCTCCA--------------------GGGGCAAGGAGTGATA-GGCA-TCCAAGGTGGTACAGC-TGGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16264092 68 + 16356641 CCCTGG-CCCGGCCCTCCCTGGCCTCCA--------------------GGAGCAAGGAGTGATA-AGCA-CCCAAGGTGGTCCAGC-TGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133173 68 + 1231380 CCCTGG-CCCGGCCCTCCCTGGCCTCCA--------------------GGAGCAAGGAGTAATA-GGCA-TCCAAGGTGGTCCAGC-TGGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2663351 69 + 11732439 CCCTGGACCCGGCCCTCCCTGGCCTCCA--------------------GGAGCAAGGAGTGATA-GGCA-TCCAAGGTGGTCCAGC-TGGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56846951 71 + 57149010 CCCTGGGCCCAGCCCTCCCTGGCCTTCA--------------------GGAGTAAGGGGTGGTG-GGGAGTCCAGGGTGGTCCAGCTTGGGG i micMur3.chr18 I 348 C 0 s otoGar3.GL873542 22827533 65 + 22939663 --CTGGACCTGGCCCTCCCTGGCCTCCA--------------------GGAGTAAGGTGTGATG-GGGAGTCCAGGGTGGTCCAGT----GG i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 226382 90 - 397369 CTCTGGACCCAGCCTTCCCTGGCCTCCAAAAGCGGCTGCTGGGTACCTGGAGAAGGGAGGTATGTGGTG-TCCAGGG-GTTCCAGCTCGGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e canFam3.chr24 47589578 298 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I a score=74458.000000 s hg38.chr20_KI270870v1_alt 91318 7 + 183433 TTGAGGC- s panTro5.chr20 66415998 7 + 66533130 TTGAGGC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093001 7 + 62195757 TTGAGGC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481825 7 - 578057 TTGAGGC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006864 7 - 110113093 TTGAGGC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732596 7 - 92844088 TTGAGGC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400579 7 + 96509753 TTGAGGC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871560 7 - 16982598 TTGAGGC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673250 7 - 3785965 TTGAGGC- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58068 7 - 179258 TTGAGGC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543575 7 - 5823884 TTGAGGT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26686 7 + 372756 TTGAGCT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16264160 7 + 16356641 CTGAGGC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133241 7 + 1231380 TTGAGGC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2663420 7 + 11732439 TTGAGGC- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56847022 7 + 57149010 TTGAGGC- i micMur3.chr18 C 0 I 17 s otoGar3.GL873542 22827598 7 + 22939663 TCGTGAT- i otoGar3.GL873542 C 0 I 2 s canFam3.chr24 47589876 7 + 47698779 TTGAGCC- i canFam3.chr24 I 298 C 0 s dasNov3.JH569290 226472 8 - 397369 TGGTGGTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I a score=1904.000000 s hg38.chr20_KI270870v1_alt 91325 12 + 183433 GCAGCGG--TCCAG s panTro5.chr20 66416005 12 + 66533130 GCAGCGG--TCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093008 12 + 62195757 GCAGCGG--TCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481832 12 - 578057 GCAGTGG--TCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006871 12 - 110113093 GCAGTGG--TCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732603 12 - 92844088 GCAGTGG--TCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400586 12 + 96509753 GCAGTGG--TCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871567 12 - 16982598 GCAGTGG--TCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673257 12 - 3785965 GCAATGG--GGCAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58075 12 - 179258 GCAATGG--GGCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543582 12 - 5823884 GCAGTGG--TCCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26693 7 + 372756 GGGGT-------CG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16264167 9 + 16356641 AGTGT-----CCCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133248 9 + 1231380 AGCGT-----CCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2663427 9 + 11732439 AGCGT-----CCAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22827607 3 + 22939663 GCA----------- i otoGar3.GL873542 I 2 C 0 s canFam3.chr24 47589883 14 + 47698779 TCAGTTTCCTCCAG i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 226480 12 - 397369 ACAGTGG--ACTGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847029 17 + 57149010 I a score=280165.000000 s hg38.chr20_KI270870v1_alt 91337 27 + 183433 AGGC----TGGCCCAGGACACAGGCTCAC---------------AG s panTro5.chr20 66416017 27 + 66533130 AGGC----TGGCCCGGGACACAGGCTCAC---------------AG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093020 27 + 62195757 AGGC----TGGCCCGGGACACAGGCTCAC---------------AG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481844 27 - 578057 AGGC----TGGCCCAGGACACAGGCTCAC---------------AG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006883 27 - 110113093 AGGC----TGGCCCAGGACACTGGCTCAC---------------AG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732615 27 - 92844088 AGGC----TGGCCCAGGACACAGGCTCAC---------------AG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400598 27 + 96509753 AGGC----TGGCCCAGGACACAGGCTCAC---------------AG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871579 27 - 16982598 AGGC----TGGCCCAGGACACAGGCTCAC---------------AG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673269 27 - 3785965 AGGC----TGGCCCAGGACACAGGCTCAC---------------AG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58087 27 - 179258 AGGC----TGGCCCAGGACACAGGCTCAC---------------AG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543594 27 - 5823884 AGGC----TGGCCCAGGACACAGGCTCAC---------------AG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26700 31 + 372756 AGGCAGTGTCACCCAGGACATAGGCTTGC---------------AG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16264176 27 + 16356641 AGGC----TCGCCCAGGACGCAGGCTTGC---------------AG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133257 27 + 1231380 AGGC----TCGCCCAGGATACAGGTTTGC---------------AG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2663436 27 + 11732439 AGGC----TTGCCCAGGACACAGGCTTGC---------------AG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56847046 27 + 57149010 AGGC----TGGACCAGGACATGGGTTCAC---------------AG i micMur3.chr18 I 17 C 0 s otoGar3.GL873542 22827610 27 + 22939663 AGGT----TGGACCAGGGCATGGGCTCAT---------------AG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47589903 42 + 47698779 GTGC----TGGGCAGGAGCATGCGCTCTCCCTTGACATCCTCCGGG i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 226492 22 - 397369 ---------GCTCCAGGAGGCAGATTCCT---------------AG i dasNov3.JH569290 C 0 I 4052 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I a score=358081.000000 s hg38.chr20_KI270870v1_alt 91364 38 + 183433 AACCCAGTCTGGAGAACCAAAGGGGAC-TTGCTGGGACC s panTro5.chr20 66416044 35 + 66533130 AACCCAGTCTGG---ACCGAAGGGGAC-TCGCTGGGACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093047 35 + 62195757 AACCCAGTCTGG---ACCGAAGGGGAC-TCGCTGGGACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481871 38 - 578057 AACCCAGTCTGGAGAACCAAAGGGGAC-TCGCTGGGACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006910 38 - 110113093 AACCCAGTCTGGAGAACCAAGGGGGAC-TTGCTGGGACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732642 38 - 92844088 AACCCCGTCTGGAGAACCAAGGGGGAC-TTGCTGGGACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400625 38 + 96509753 AACCCCGTCTGGAGAACCAAGGGGGAC-TTGCTGGGACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871606 38 - 16982598 AACCCCGTCTGGAGAACCAAGGGGGAC-TTGCTGGGACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673296 38 - 3785965 AACCCCATCTAGAGAACCAAGGGGGAC-TTGCTGGGACC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58114 38 - 179258 AACCCCGTCTAGAGAACCAAGGGGGAC-TTGCTGGGACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543621 38 - 5823884 AACCCAGTCTGGAGAACCAAGGGGGAC-TTGCTGGGACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26731 38 + 372756 AACCCAGTCTAGAGAACCAAAGGGGGC-TTGCTGGGACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16264203 38 + 16356641 AACCCAGTCTGGAGAACCAAAGGGGAC-TTGCTGGGACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133284 38 + 1231380 AACCCAGTCTGGAGAACCAAAGGGGAC-TTGCTGGGACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2663463 38 + 11732439 AACCCAGTCTGGAGAACCAAAGAGAAC-TTGCTGGGACC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56847073 38 + 57149010 GGTCCAGCCTGGAGAGCCAAAGGCGAC-CTGCTGGGACC i micMur3.chr18 C 0 I 2768 s otoGar3.GL873542 22827637 26 + 22939663 GACCCAGGCTGGAGAGCCCAAAGTGA------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47589945 37 + 47698779 CTCACCGCCTGGGG--CTGAGCAGGGCGCTGCAGAGGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e dasNov3.JH569290 226514 4052 - 397369 I a score=4775106.000000 s hg38.chr20_KI270870v1_alt 91402 552 + 183433 TCCTGCCCTAGGCAAGAGTCCCC-------AGA---------------------GTGTCTCACTGACCATCCACATGCC-------ACTGtttaaaaacagcgttattggaatgtaatgtgcacatcacagaattcacctattaaaaatatacaattcagtggttttagcgtacgtgtagggttgtacatctatcaccacagcccaagtttagaccgttttgatcaccccagaaagaaaccccatgcccgttcacagtcgttctccattt--tctcctccaccagtcctaggcaacc--------acgaatctactttctatctctacgaatttgcctgttctggc--------------catttcacaaatatggaattgttcaatatgtggt----------cttttgtccctggcctctttcactgaacacgaagtttttgagattcacccacattgttgcatgtataagcaacttcattcctttttattgccaaagactgtgccactgtatttcgtatcacccattcagcagttgatggacat---ttgggtttttccactttttggct-agtatgaataaagctgctatgaatagttgtgtacaagccttt-------------------------------------------------------atgt-gacat s panTro5.chr20 66416079 550 + 66533130 TCCTGCCCTCGGCAAGGGTCCCC-------AGA---------------------GTGTCTCGCTGACCATCCACACGCC-------ACTGtttaaaaacagcgttattggaatgtaatgtgcacatcacagaatccacctattaaacacacacgattcagtggttttagcgtacgtgtagggttgtacatctatcaccacagcccaagttcagaccgttttgatcaccccagaaagaaaccccatgccggttcacagtcgttctgcattt--tctcctccaccagtcctaggcagcc--------acgaatctactttcta--tctacgaattcgcctgttctggc--------------cgtttcgcaaatatggaattgttcaatatgtggt----------cttttgtccctggcctctttcactgaacacgaagtttttgagattcacccacatcgttgcatgtataagcaacttcattcctttttattgccaaagactgtgccactgtatttcgtatcacccattcagcagttgacggacat---ttgggtttttccactttttggct-agtatgaataaagctgctatgaatagttgtgtacaagccttt-------------------------------------------------------atgt-gacat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093082 552 + 62195757 TCCTGCCCTCGGCAAGGGTCCCC-------AGA---------------------GTGTCTCACTGACCATCCACACGCC-------ACTGtttaaaaacagcgttattggaatgtaatgtgcacatcacagaatccacctattaaacacacacgattcagtggttttagcgtacgtgtagggttgtacatctatcaccacagcccaagttcagaccgttttgatcaccccagaaagaaaccccatgccggttcacagtcgttctgcattt--tctcctccatcagtcctaggcagcc--------acgaatctactttctatctctacgaattcgcctgttctggc--------------cgtttcacaaatatggaattgttcaatatgtggt----------cttttgtccctggcctctttcactgaacacgaagtttttgagattcacccacatcgttgcatgtataagcaacttcattcctttttattgccaaagactgtgccactgtatttcgtatcacccattcagcagttgacggacat---ttgggtttttccactttttggct-agtatgaataaagctgctatgaatagttgtgtacaagccttt-------------------------------------------------------atgt-gacat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 481909 559 - 578057 TCCTGCCCTAGGCAAGGGTCCCC-------AGA---------------------GTGTCTCACTGACCATCCACATGCC-------ACTGtttaaaaacagctttattggaatgtaatgtgcacatcacagaattcacctattaaacatacacgattcagtggttttagcatacgtgtagggttgtaca---atcaccacagcccaagtttaggccgttttgatcaccccagaaagaaaccccatgcccgttcacagtcgttctccactt--cgtcctccaccagtcctaggcaacc--------acgaatctactttctatcgctacgaatttgcctgttctgga--------------catttcacagatatggaattgttcaatatgtggtcttttgtccccttttgtccctggcctctttcactgaacacaaagtttttgagattcacccacgttgttgcatgtataagcaacttcattcctttttattgccaaagactgtgcccctgtatttcgtatcacccattcagcagttgatggacat---ttgggtctttccactttttggct-agtatgaataaagctgctatgaatagttgtgtacaagccttt-------------------------------------------------------atgt-gacat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110006948 548 - 110113093 TTCTGCCCTATGCAAGAGTCCCC-------AGA---------------------GTGTCTCACTGACCCTCCACATGCC-------ACTGtttaaaaacagctttattggaatgtaatctgcacatcacagaattcacctattgaaagtatacaactcagtggttttagcata----tagggttgtgcatctatcaccacagcccaattttagactgttttaatcaccccagaaagaaaccccatgcccattcacagtcattctccattt--tctcctccaccagtcctaggcaacc--------atgaatccactttctatctctatgaatctgcctgttctgga--------------catttcataaatatggaattgttcaatatgtggt----------cttttgtccctggcctctttcaccgaacacaatgtttttgagattcacccacattgttgcatgtataagcaacttcattcctttttattgccaaagactatgccactgtatttcgtatcacccattcagcagttgatggacat---ttgggtttttccactttttggct-agtatgaataaagctgctataaatagttgtgtacaagccttt-------------------------------------------------------atgt-ggcat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92732680 553 - 92844088 TCCTGCCCTAAGCAAGAGTCCCT-------TGA---------------------GTGTCTCACTGACCATCCACATGGC-------ACTGtttaaaaacagctttattggaatgtaatttgcacatcacagaattcacctattaaaagtatacaactcaatggttttagcatatgcatagggttgtgcatctatcgtcacagctcagttttaggctgttttgatcaccccagaaagaaaccccatgcccattcacagtcattctccattt--tctcctccaccagtcctaggcaacc--------acgagtctactttctctctctatgaatttgcctgttctgga--------------catttcataaatatggaattgttcagtacgtggt----------cttttgtccctggcctctttcactgaacacgatgtttctgagattcacccacatcattgcgagtataagcaatttccttcctttttgttgccaaagacagtgccactgtatttcgtatcacccagtcagcagttgatggacat---ttgggtttttccactttttggtt-agtaggagtaaagctgctataaatacttgtgtacaagccttt-------------------------------------------------------atgtggacat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96400663 553 + 96509753 TCCTGCCCTAAGCAAGAGTCCCT-------TGA---------------------GTGTCTCACTGACCATCCACATGGC-------ACTGtttaaaaacagctttattggaatgtaatttgcacatcacagaattcacctattaaaagtatacaactcaatggttttagcatatgcatagggttgtgcatctatcgtcacagctcagttttaggccgttttgatcaccccagaaagaaaccccatgcccattcacagtcattctccattt--tctcctccaccagtcctaggcaacc--------acgagtctactttctctctctatgaatttgcctgttctgga--------------catttcataaatatggaattgttcagtacgtggt----------cttttgtccctggcctctttcactgaacacgatgtttctgagattcacccacatcattgcgagtataagcaatttccttcctttttgttgccaaagacagtgccactgtatttcgtatcacccagtcagcagttgatggacat---ttgggtttttccactttttggct-agtaggagtaaagctgctataaatacttgtgtacaagccttt-------------------------------------------------------atgtggacat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16871644 553 - 16982598 TCCTGCCCTAAGCGAGAGTCCCT-------TGA---------------------GTGTCTCACTGACCATCCACATGGC-------ACTGtttaaaaacagctttattggaatgtaatttgcacatcacagaattcacctattaaaagtatacaactcaacggttttagcatatgcatagggttgtgcatctatcgtcacagctcagttttaggctgttttgatcaccccagaaagaaaccccatgcccattcacagtcattctccattt--tctcctccaccagtcctaggcaacc--------acgagtctactttctctgtctatgaatttgcctgttctgga--------------catttcataaatatggaattgttcagtacgtggt----------ctcttgtccctggcctctttcaccgaacacgacgtttctgagattcacccacatcattgcgagtataagcaatttccttcctttttgttgccaaagacagtgccactgtatttcgtatcacccagtcagcagttgatggacat---ttgggtttttccactttttggct-agtaggagtaaagctgctataaatacttgtgtacaagccttt-------------------------------------------------------atgtggacat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673334 553 - 3785965 TCCTGCCCTAAGCGAGAGTCCCT-------TGA---------------------GTGTCTCACTGACCATCCACATGGC-------ACTGTTCaaaagcagctttattggaatgtaatttgcacatcacagaattcacctattaaaagtatacaactcaatggttttagcatatgcatagggttgtgcatctatcgtcacagctcagttttaggctgttttgatcaccccagaaagaaaccccatgcccattcacagtcattctccattt--tctcctccaccagtcctaggcaacc--------acgagtctactttctatctctatgaatttgcttgttctgga--------------catttcataaatatggaattgttcagtacgtggt----------cttttgtccctggcctctttcactgaacacgatgtttctgagattcacccacatcattgcgagtataagcaatttccttcctttttgttgccaaagacagtgccactgtatttcgtatcacccagtcagcagttgatggacat---ttgggttttcccactttttggct-agtaggagtaaagctgctataaatacttgtgtacaagccttt-------------------------------------------------------atgtggacat i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58152 553 - 179258 TCCTGCCCTAAGCGAGAGTCCCT-------TGA---------------------GTGTCTCACTGACCATCCACATGGC-------ACTGtttaaaagcagctttattggaatgtaatttgcacatcacagaattcacctattaaaagtatacaactcaatggttttagcatatgcatagggttgtgcatctatcgtcacagctcagttttaggctgttttgatcaccccagaaagaaaccccatgcccattcacagtcattctccattt--tctcctccaccagtcctaggcaacc--------acgagtctactttctatctctatgaatttgcctgttctgga--------------catttcataaatatggaattgttcagtacgtggt----------cttttgtccctggcctctttcactgaacacgatgtttctgagattcacccacatcattgcgagtataagcaatttccttcctttttgttgccaaagacagtgccactgtatttcgtatcacccagtcagcagttgatggacat---ttgggttttcccactttttggct-agtaggagtaaagctgctataaatacttgtgtacaagccttt-------------------------------------------------------atgtggacat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5543659 553 - 5823884 TCCTGCCCTAAGCAAGAGTCCCC-------GGA---------------------GTGTCTCACTGACCGTCCACATGGC-------ACTGTTTAAAaacagctttattggaatgtgatttgcacatcacagcattcacctattaaaagtatacaactcaatggttttagcatatgtgtagggttgtgcatctatcgtcacagctcaattttagactgttttgatcaccccagaaagaaaccccatgcccattcacagtcattctccattt--tctcctccaccagtcctaggcaacc--------acgaatctactttctatctctatgaatttgcctgttctgga--------------catttcataaatatggaattgttcagtacgtggt----------cttttgaccctggcctctttcactgaacacgatgtttctgagattcacccacatcattgcgagtataagcaatttccttcctttttgttgccaaagacagtgccactgtatttcatatcacccagtcagtagttgatggacat---ttggatttttccactttttggct-agtaggagtaaagctgctataaatacttgtgtacaagtcttt-------------------------------------------------------atgtggacat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 26769 545 + 372756 TCCTGCCCTGTGCAGGAGTCCCC-------AGA--------------------GGCGTCCCACTGACCATCCATGGGCT-------ACTGtttaaaaacagctttattggaatgtaatttacacatcacagaattcatctattaaaagtatacaattcagtggttttagtgtatttatagagctgtgcatctatcatcacaacccaattttaggtgattttgatcaccccggaaagaaaccccgtgcccacgaacagtcattgtccatct--gctcctccacgcgtccgaggtgac---------acaaatctactttctgtctttgtggatttgcctgttttgca--------------cctttggtaaatacagaattggtcaatacgtggc----------cttttctgcctggctttttccaccaagcatgatgttt-tgagatgcacccacattgtcctgtgtataagc-gctccattcctttttattgccaaagactatgcaactgtatcttgt----ctcactcagcggttgat-gaca----ttgggtttctccacttttctgct-agtgtgaataaagctgctatgcatagttgtgtacaagctttt-------------------------------------------------------atgtggacat i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16264241 550 + 16356641 TCCCGCCCTGTGCAGGAGTCCCC-------AGA--------------------GGCGTCCCACTGACCATCCATGGGCC-------ACTGtttaaaaacagctttattggaatgtaatttacacatcacagaattcacctattaaaagtatacaattcagtggttttagtgtatttatagagctgtgcatctatcatcacaacccaattttaggtgattttgatcaccccagaaagaaaccccatgcccacaaacagtcattctccgtct--gctcctccacgcgtcctcggtgac---------atgaatctactttctgtctctgtggatctgcctgttctgca--------------cctttcgtcagtatggaatctgtcaacacgtggc----------cttttctgcctggctttctccaccgagcgtgacgttt-tgagatgcacccacattgttgcatgtataagc-acccccttcctttttactgccaaggacgatgcaactgtatcttgtgtcactcgctcagcagctgatggaca----ttgggtttttccactttttggct-agtatgaataaagcttctatgcatagttgtgtacaagccttt-------------------------------------------------------atgtggacat i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133322 550 + 1231380 TCCCGCCTTGTGCAGGAGTCCCC-------AGA--------------------GGCGTCCCACTGACCATCCACAGGCC-------ACTGtttaaaaacagctttattggaatgtaatttacacatcacagaattcacctattaaaagtatgcaattcagtggttttactgtatttatagagctgtgcgtctatcatcacaacccaattttaggtgattttgatcaccccagaaagaagccccatgcccacaaacagtcattctccgcct--gctcctccacgcgtcctaggcgac---------atgaatctactttctatctctgtggatttgcctgttctgca--------------cctttcgtaaatatggaattggtcaatacgtggc----------cttttctgcctggctttttccaccgagcatgacgttt-tgagatgcacccacactgtcgcatgtataagc-accccattcttttttattgccaaagaccatgcaactgtatcttgtatcactcactcagcagtggatggata----ttgggtttttccagtttttggct-agtatgaataaagctgctatgcatagttgtgtacaagccttt-------------------------------------------------------atgtggacat i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2663501 533 + 11732439 TCCCGCCCTGTGCAGGGGTCCCC-------AGA--------------------GGCGTCCCACTGACCATCCATGGGCC-------ACTGtttaaaaacagctttattggaatgtaatttacacatcacagaattcgcctattaaaagcatacaattcagtggttttagtgtatttatagagctgtgcatctatcatcacaacccaattttaggtgattttgatcaccccagaaagaaaccccatgcccacgaacagtcattctccatct--gctcctccacgcgtcctaggcgac------------------------gtctctgtggatttgcctgttctgca--------------ccttccgtaaatacggaattggtcaatacgtggc----------cttttctgcctggctttttgcaccgagcgtgatgttt-tgagatgcacccacattgtcgcgtgtacacgc-act-cattccttcttattgccaaagactgtgcaactgtatcgtgtttcactcattcagcagttgatggaca----ttgggtttttccactttttggct--gtatgaataaagctgctatgcatagttgtggacaagccttt-------------------------------------------------------atgtggacat i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22827663 597 + 22939663 -CCTGCCGCATATCAGAGTTCCC-------AGA--------------------AGTGACTAATCGACCACTTGTATGCC-------ACtttttaaaa--agttttgtttgagtataatttacccatcatataattcaccaatctgaagcatataattcaatggttttagcatatttatagacttgttcatttatcatcacaatttaattttagaacatttc-atcaccctaaaaagaaatctcatggctattaacagccactctcctttgcaccccctcttccagtcctaggtagct--------gttaacttactttctgcct----ggatttgcctattctgga--------------catttcataaatgtgaaattg-taagtgtgtaat----------cttttacatcttacttttttcagggaccataaagtttttgaggttcacctattttgtagcatgtttgagc-actttattcctttttattgccaaacattatacaattgtattttgcatcatcttttcagcaattaatggacat---ttgggtttttctactttttggct----ctgcgtaaagctgctatgaatagttgtgtacaagGATTtttcttttttttttttttttgagacagaatttcactttgttgccttctgtagagtactgt-ggcat i otoGar3.GL873542 C 0 I 123 s canFam3.chr24 47589982 582 + 47698779 ACCTGACCTGTGCGGGGGTCTCCCCTCCGTAGACTTGGTCGTCGTAGGCCGGCGGTGAGCCCTGGGCCTGCGAGACGCCCAGTGAGGCTCCTTCGTGTAagcgttattgagatacaatttgcacgccgtgtaacccacgt-ttacaggtgcacagttcagggggcgtagcatatgggcag--ctgcgcacccgtcaccgcagct-ggttccaggacgttgtcgttagcccagaacgaaaccctgcggcc-ttcacagcctctctccgcct--gcacccctcccctgcccagccgtcccgggatctcctaacctgctcttggcctctgtggatttcccgtttctgggaattctgcaaattccactccgtaaatatgaaattgtacaatacgtggt----------c-cttgtgtctgact-----------------------tgaggtttg-ctacactgtacaacgtacgaga-acttggaccctttttgttgccaaatgctagtcagtggcattttgtgtcatctcttcagcaggtgatgggcacgtgtgggctttttccacttttgggaaaaatatgaataaagctacagcaaagagctgtgtac-agactcg-------------------------------------------------------gtgtgaacgt i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=218455.000000 s hg38.chr20_KI270870v1_alt 91954 19 + 183433 atgtttttatttctcttgg s panTro5.chr20 66416629 19 + 66533130 atgtttttatttctcttgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093634 19 + 62195757 atgtttttatttctcttgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482468 19 - 578057 atgtttttatttctcctgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110007496 19 - 110113093 atgtttttatttctcttgt i nomLeu3.chr13 C 0 I 29 s rheMac8.chr10 92733233 19 - 92844088 atgtttttatttctcttgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96401216 19 + 96509753 atgtttttatttctcttgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16872197 19 - 16982598 atgtttttatttctcttgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673887 19 - 3785965 atgtttttatttctcttgg i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58705 19 - 179258 atgtttttatttctcttgg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5544212 19 - 5823884 atgtttttatttcttttgg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 27314 19 + 372756 atgtttttatttctcttgg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16264791 19 + 16356641 atgtttttatttctcttgg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133872 19 + 1231380 atgtttttatttctcttgg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664034 19 + 11732439 atgtttttatttctcttgg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22828383 19 + 22939663 atatttttatttttcttta i otoGar3.GL873542 I 123 C 0 s canFam3.chr24 47590564 19 + 47698779 acattttcatttctcttgg i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=58155.000000 s hg38.chr20_KI270870v1_alt 91973 7 + 183433 ----gcaaata s panTro5.chr20 66416648 7 + 66533130 ----gcaaata i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093653 7 + 62195757 ----gcaaata i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482487 7 - 578057 ----gcaaata i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92733252 7 - 92844088 ----gcaaata i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96401235 7 + 96509753 ----gcaaata i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16872216 7 - 16982598 ----gcaaata i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673906 7 - 3785965 ----gcaaata i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58724 7 - 179258 ----gcaaata i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5544231 7 - 5823884 ----gcaaata i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 27333 7 + 372756 ----gcaaata i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16264810 7 + 16356641 ----gcaaata i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1133891 7 + 1231380 ----gcaaata i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664053 7 + 11732439 ----gcaaata i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22828402 7 + 22939663 ----gtagata i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47590583 7 + 47698779 ctccgta---- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e nomLeu3.chr13 110007515 29 - 110113093 I a score=1052771.000000 s hg38.chr20_KI270870v1_alt 91980 116 + 183433 tcta-gagtggaattcctgagtcat---gtaactctatgttgaacattttgagtaactgccatgccattttcc-aagtgattgtgctattttacattcgcatcagca-ttctatgagggttc---------------- s panTro5.chr20 66416655 116 + 66533130 tcta-gagtggaattcctgagtcat---gtaactctatgttgaacattttgagtaactgccatgccattttcc-aagtgactgtgctattttacattcgcatcagca-ttctatgagggttc---------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093660 116 + 62195757 tcta-gagtggaattcctgagtcat---gtaactctatgttgaacattttgagtaactgccatgccattttcc-aagtgattgtgctattttacattcgcatcagca-ttctatgagggttc---------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482494 117 - 578057 tcta-gagtggaattcctgagtcat---gtaactctatgttgaacattttgagtaactgccatgccattttcc-aagtgactgtgctattttacattcgcatcagcatttctatgagggttc---------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110007544 116 - 110113093 tcta-gagtggaattcctgagtcat---ataactctatgtttaacattttgagtaactgccatgccattttcc-aagtgattgtgctattttatattcgcatcagca-ttctatgagggttc---------------- i nomLeu3.chr13 I 29 C 0 s rheMac8.chr10 92733259 116 - 92844088 tcta-gagtggaattcctgagtcat---ataactctatatttaacattttgagtaactgctgtgccatcttcc-aagcgattgtgctattttacattcccatcagca-ttctatgagggttc---------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96401242 116 + 96509753 tcta-gagtggaattcctgagtcat---ataactctatatttaacattttgagtaactgctgtgccatcttcc-aagcgattgtgctattttacattcccatcagca-ttctatgagggttc---------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16872223 116 - 16982598 tcta-gagtggaattcctgagtcat---ataactctatatttaacattttgagtaactgctgtgccatcttcc-aagcgattgtgctattttacattcccatcagca-ttctatgagggttc---------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3673913 116 - 3785965 tcta-gagtggaattcctgagtcat---ataactctatatttaacattttgagtaactgccgtgccattttcc-aagcgattgtgctattttacattcccatcagca-ttctgtgagggttc---------------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58731 116 - 179258 tcta-gagtggaattcctgagtcat---ataactctatatttaacattttgagtaactgccgtgccattttcc-aagcgattgtgctattttacattcccatcagca-ttctatgagggttc---------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5544238 116 - 5823884 tcta-gagtggaattcctgagtcat---ataactctatatttaacattttgagtaactgccatgccgttttcc-aagcaattgtgctattttacattcccatcagca-ttctatgagggttc---------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 27340 120 + 372756 tctaggagtgaaatccctgagtcatatgataaccctatgtttaacattttgagtgactgccatgccattttcc-aagtgattgtcctattttacactcccatcagca-ttatatgagggttc---------------- i calJac3.chrUn_GL286459 C 0 I 16 s saiBol1.JH378156 16264817 118 + 16356641 tctaggagtgaaattcctgcatcatatgataaccccatgtttaaca-tttgagtgacttccatgccg-tttcc-aagtgattgtactattttacactcccatctgca-ttatatgagggttc---------------- i saiBol1.JH378156 C 0 I 16 s cebCap1.NW_016107870v1 1133898 118 + 1231380 tctaggagtgaaattcctgcgtcatatgataacccgatgtttaacattttgagtgactgccacgccattttcc-aagtgattgtcctattt--cactcccatcctca-ttatatgagggttc---------------- i cebCap1.NW_016107870v1 C 0 I 16 s aotNan1.NW_018500483v1 2664060 120 + 11732439 tctaggagtgaaattcctgagtcatatgataaccctacgtttaacattttgagtgactgctgtgccattttct-gagcgattgtactattttacactcccgtcagca-ttatacaagggttc---------------- i aotNan1.NW_018500483v1 C 0 I 57 s otoGar3.GL873542 22828409 121 + 22939663 cctaggagtagaattttggagtcatatgataattctatatttaataatttaggtacctgccagactattttccaaagcaattgtgccattttacattcctgtcagca-gtatatgagggttc---------------- i otoGar3.GL873542 C 0 I 16 s canFam3.chr24 47590590 126 + 47698779 cctcggagtcatatg-ctgggttacatggtaactc--tgtttaatattttg--------ccagactgttttccaaagtagttgtgctgctttatgctcccactggca-atgtagaagggtttcagtttctccatattc i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=387124.000000 s hg38.chr20_KI270870v1_alt 92096 51 + 183433 ttgccaacacttgttactatctgtttatcttt-----aacattacagccattttag------ s panTro5.chr20 66416771 51 + 66533130 tcgccaacacttgttactatctgtttatcttt-----aaaattacagccattttag------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093776 51 + 62195757 tcgccaacacttgttactatctgtttatcttt-----aaaattacagccattttag------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482611 51 - 578057 tcgtcaacacttgttactatctgtttatcttt-----aaaattacagccattttag------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110007660 51 - 110113093 ttgccaacacttgttactatctgtttgtcttt-----aaaattacagccgttttag------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92733375 51 - 92844088 tcgccaacacttgttactatctgtttatcttt-----aaaattacagtcattttag------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96401358 51 + 96509753 tcgccaacacttgttactatctgtttatcttt-----aaaattacagtcattttag------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16872339 51 - 16982598 tcgccaacacttgttactatctgtttatcttt-----aaaattacagtcattttag------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3674029 51 - 3785965 tcgccaacacttgttactatctgtttatcttt-----aaaattacagtcattttag------ i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58847 51 - 179258 tcgccaacacttgttactatctgtttatcttt-----aaaattacagtcattttag------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5544354 51 - 5823884 tcgccaacacttgttactatctgtttatcttt-----aaaattacagtcattttag------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 27476 44 + 372756 tcaccaacactggttactgtctgtttattttt-----aaaactaca-------tgg------ i calJac3.chrUn_GL286459 I 16 C 0 s saiBol1.JH378156 16264951 44 + 16356641 tcaccaacacttgttactgtctgtttattttt-----aaaactaca-------tgg------ i saiBol1.JH378156 I 16 C 0 s cebCap1.NW_016107870v1 1134032 44 + 1231380 tcaccaacacttgttactgtctgtttattttt-----aaaactaca-------cgg------ i cebCap1.NW_016107870v1 I 16 C 0 s otoGar3.GL873542 22828546 45 + 22939663 ttgtcaatacttgttattgtctgttttttttt--------cttaaggtgaatg--------- i otoGar3.GL873542 I 16 C 0 s canFam3.chr24 47590716 62 + 47698779 tcttcagcacttgttattgtctgttttctttttttctttaattacagccatttcagtgggcg i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e aotNan1.NW_018500483v1 2664180 57 + 11732439 I a score=2620652.000000 s hg38.chr20_KI270870v1_alt 92147 266 + 183433 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatgtgcttattggccattcccgtgttatctttggagaaatgtctgttcaagtcctctgctcattctaaaattgggttatttgtcttattat-gagttatgagagttcttttt---tccaaatacaagctctttatcagatttacgatttgcaaatattttctcccagtctttgggttgtcttttcaccatattgatagtgttat s panTro5.chr20 66416822 266 + 66533130 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---aggcatctcttcatgtgcttattggccattcccgtgttatctttggagaaatgtctgttcaagtcctctgctcattctaaaattgggttatttgtcttattat-gagttatgagagttcttttt---tccaaatacaagctctttatcagatttacgatttgcaaatattttctcccagtctttgggttgtcttttcaccttattgatagtgttat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62093827 266 + 62195757 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatgtgcttattggccattcccgtgttatctttggagaaatgtctgttcaagtcctctgctcattctaaaattgggttatttgtcttattat-gagttatgagagttcttttt---tccaaatacaagctctttatcagatttatgatttgcaaatattttctcccagtctttgggttgtcttttcaccttattgagagtgttat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482662 266 - 578057 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatgtgcttatcggccattcccgtgttatctttggagaaatgtctgttcaagtcctctgctcattttaaaattgggttatttgtcttattat-gagttacgagagttcttttt---tccaaatacaagctctttatcagatttacgatttgcaaatattttctcccagtctttgggttgtcttttcaccttattgatagtgttat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110007711 264 - 110113093 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatgtgcttattggccatttccatgttatctttggagaaatgtttgttcaaatcctctgctcatgttaaaattgggttatttgtcttgttat-gagttatgagagttcttttg---tccaaatacaagctctttgtcaggtttacgatttgcaaatattttctcccagtctttgggttctcttttcaccttattgacagtgtt-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92733426 265 - 92844088 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatgtgcttattggcca-ttccatgttatctttggagaaatgtctattcaaatcctctgctcattttaaaattgggttattaatcctattat-gagttatcagagttctttat---tccgaatacaagctctttatcagatacatgatttgcaaatattttctcccagtctttgggttgtcttttcaccttattgacagtgttat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96401409 265 + 96509753 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatgtgcttattggcca-ttccatgttatctttggagaaatgtctattcaaatactctgctcattttaaaattgggttattaatcctattat-gagttatcagagttctttat---tccgaatacaagctctttatcagatacatgatttgcaaatattttctcccagtctttgggttgtcttttcaccttattgacagtgttat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16872390 264 - 16982598 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatgtgcttattggcca-ttccatgttatctttggagaaatgtctattcaaatcctctgctcattttaaaattgggttattaatcctattat-gagttatcagagttctttat---tccgaatacaagctctttatcagatacatgatttgcaaatattttctcccagtctttgggttgtcttttcacctta-tgacagtgttat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3674080 265 - 3785965 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatgtgcttattggcca-ttccatgttatctttggagaaatgtctattcaaatcctctgctcattttaaaattgggttatttatcctattat-gagttatcagagttctttat---tccgaatacaagctctttatcagatacatgatttgcaaatattttctcccagtctttgggttgtcttttcaccttattgacagtgttat i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 58898 265 - 179258 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatgtgcttattggcca-ttccatgttatctttggagaaatgtctattcaaatcctctgctcattttaaaattgggttatttatcctattat-gagttatcagagttctttat---tccgaatacaagctctttatcagatacatgatttgcaaatattttctcccagtctttgggttgtcttttcaccttattgacagtgttat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5544405 266 - 5823884 tgcaatggtatctgagtgtggttttgatttgcatttcctggattactagctgtt---gggcatctcttcatatgcttattggccatttccatgttatctttggagaaatgtctattcaaatcctctgctcattttagaatcgggttatttatcttattat-gagttattagagttctttat---tccgaatacaagctctttatcagatacatgatttgcaaatattttctcccagtctttgggttgtcttttcaccttattgacagtgttat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 27520 267 + 372756 tacagtggtatccgagtgcggttttgatttgcattccctgagccactagatgat---gggcatcttttcatgagcttattggccatttctgtgttatcttcggagaaatgtctattcaaatccttcactcatttttaaattggatcatttctcttattatggagttgtaagagttctttat---tccaaatacaagttctttttcagatatatgatttgcaaatattttctcccaggttttgggttgtcttttcaccttactgacagtgttat i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16264995 266 + 16356641 tgcagtggtgtccaagtgtgg-tttgatttgcatttcctgagtcactagatgtt---gggcatcttttcatgagcttatgggccctttccgtgttatctttggagaaatgtctattcaaatcctttgctcatttttaaattgggtcatttgtcttattatggagttgtaagagttctttat---tccaaatacaagttctttttcagatatatgatttgcaaatattttctcccaggctttgggttgtcttttcaccttactgacagtgttat i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134076 267 + 1231380 tgcagtggtgtccaagtgtggttttgatttgcattttctgagtcactagatgtt---gggcatcttttcatgagcttattggccatttccctgttatctttggagaaatgtctattcaaatcctttgctcatttttaaagtggatcattcgtcttattatggagttgtaagagttctttat---tccaaatacaagttctttttcagatatatgattggcaagtattttctcccaggctttgggctgtctttccaccttactgacagtgttat i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664237 261 + 11732439 tgcggtggtatccgagcgtggttttgattcgcatttcctgagtcattggatgtt---gggcatcttttcatgagcttattggccatttccgtgttatctttggagaaatgtctattcaaatcctttgctcgtttttaaattgggtcatttgtcttattatggagttgtaagaggtctttat---tccaaatacaagttctttttcagatacatgatttgcaaatattttctcccaggctttgcattatcttttcacctcaccaacag------ i aotNan1.NW_018500483v1 I 57 C 0 s otoGar3.GL873542 22828591 246 + 22939663 tgcagtgatacctgatcatggatttgatttgaatttccctaattactaggtgct---gagcatcttgtcatatgtttattggccatttattcgatgtctttggggatatatctactcaaa-cctttgtccatttctaaattgggttatttaccttcttatggagttgtaagagt-----------------------tcttcatcatatatatgatttgcaagtattttctcccagtctatgggttatcttctctccttattggtggtgttat i otoGar3.GL873542 C 0 I 251 s canFam3.chr24 47590778 273 + 47698779 tgaagtagtatctcattgtggttttgattagcatttccctaatgactacatgttgaggagcatcttttcatgtgcatattggccatttatatgttgtgtttggagaaatgtatattcaaatattttatccatttttaaagtgggttatttgtcttattatgaagttttaagagttctttatgtatttggaatgaagtctcttattagatatatgatttgcaaatactttctcccagtctatgggttatattttcactttatcaatgacgttgt i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=23609.000000 s hg38.chr20_KI270870v1_alt 92413 8 + 183433 tcatttat s panTro5.chr20 66417088 8 + 66533130 tcatttat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094093 8 + 62195757 tcatttat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482928 8 - 578057 tcatttat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110007975 6 - 110113093 --atttat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92733691 8 - 92844088 ttatttat i rheMac8.chr10 C 0 I 16 s macFas5.chr10 96401674 8 + 96509753 ttATttat i macFas5.chr10 C 0 I 330 s macNem1.NW_012014244v1 16872654 8 - 16982598 ttatttat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3674345 8 - 3785965 ttatttat i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 59163 8 - 179258 ttatttat i manLeu1.NW_012101652v1 C 0 I 16 s colAng1.NW_012114444v1 5544671 8 - 5823884 ttatttat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 27787 4 + 372756 atat---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265261 4 + 16356641 ttat---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134343 4 + 1231380 atat---- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22829088 8 + 22939663 ttatttat i otoGar3.GL873542 I 251 C 0 s canFam3.chr24 47591051 1 + 47698779 ---t---- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e aotNan1.NW_018500483v1 2664498 0 + 11732439 C a score=28665.000000 s hg38.chr20_KI270870v1_alt 92421 3 + 183433 tta s panTro5.chr20 66417096 3 + 66533130 tta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094101 3 + 62195757 tta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482936 3 - 578057 tta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110007981 3 - 110113093 tta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92733715 3 - 92844088 tta i rheMac8.chr10 I 16 C 0 s macFas5.chr10 96402012 3 + 96509753 tta i macFas5.chr10 I 330 C 0 s macNem1.NW_012014244v1 16872662 3 - 16982598 tta i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3674353 3 - 3785965 tta i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 59187 3 - 179258 tta i manLeu1.NW_012101652v1 I 16 C 0 s colAng1.NW_012114444v1 5544679 3 - 5823884 tta i colAng1.NW_012114444v1 C 0 I 330 s calJac3.chrUn_GL286459 27791 3 + 372756 tta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265265 3 + 16356641 tta i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134347 3 + 1231380 tta i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22829096 3 + 22939663 tta i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e canFam3.chr24 47591052 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e aotNan1.NW_018500483v1 2664498 0 + 11732439 C a score=1543.000000 s hg38.chr20_KI270870v1_alt 92424 1 + 183433 t s panTro5.chr20 66417099 1 + 66533130 t i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094104 1 + 62195757 t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482939 1 - 578057 t i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110007984 1 - 110113093 t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92733718 1 - 92844088 g i rheMac8.chr10 C 0 I 12 s macFas5.chr10 96402015 1 + 96509753 g i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16872665 1 - 16982598 t i macNem1.NW_012014244v1 C 0 I 719 s cerAty1.NW_012001373v1 3674356 1 - 3785965 t i cerAty1.NW_012001373v1 C 0 I 321 s manLeu1.NW_012101652v1 59190 1 - 179258 g i manLeu1.NW_012101652v1 C 0 I 13 s calJac3.chrUn_GL286459 27794 1 + 372756 t i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265268 1 + 16356641 t i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134350 1 + 1231380 t i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22829099 1 + 22939663 t i otoGar3.GL873542 C 0 I 6 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e canFam3.chr24 47591052 0 + 47698779 C e colAng1.NW_012114444v1 5544682 330 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e aotNan1.NW_018500483v1 2664498 0 + 11732439 C a score=197582.000000 s hg38.chr20_KI270870v1_alt 92425 30 + 183433 ttttgagacagagtcttgctctgtcacgca s panTro5.chr20 66417100 30 + 66533130 ttttgagacagagtcttgctctgtcacgca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094105 30 + 62195757 ttttgagacagagtcttgctctgtcacgca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482940 30 - 578057 ttttgagacggagtcttgctctgtcacgca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110007985 30 - 110113093 ttttgagatggagtctcgctctgtcaccca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92733731 30 - 92844088 ttttgagacagagtctcgctctgtcaccca i rheMac8.chr10 I 12 C 0 s macFas5.chr10 96402016 30 + 96509753 ttttgagacagagtctcactctgttaccca i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3674678 30 - 3785965 ttttgagacagagtctcactctgttaccca i cerAty1.NW_012001373v1 I 321 C 0 s manLeu1.NW_012101652v1 59204 30 - 179258 ttttgagacagagtctcgctctgtcaccca i manLeu1.NW_012101652v1 I 13 C 0 s colAng1.NW_012114444v1 5545012 30 - 5823884 ttttgagacggagtctcactctgtcaccca i colAng1.NW_012114444v1 I 330 C 0 s calJac3.chrUn_GL286459 27795 30 + 372756 ttttgaggttgagtctcactctgtcaccca i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265269 30 + 16356641 ttttgaggttgagtttcactctgtcaccca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134351 30 + 1231380 ttttgaggccgagtatcactctgtcaccca i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664498 9 + 11732439 ---------------------tgtcaccca i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22829106 30 + 22939663 ttttgagacagcgtctcaagctattgctct i otoGar3.GL873542 I 6 C 0 s canFam3.chr24 47591052 9 + 47698779 ---------------------tgtcatgca i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e macNem1.NW_012014244v1 16872666 719 - 16982598 I a score=30201.000000 s hg38.chr20_KI270870v1_alt 92455 4 + 183433 ggct s panTro5.chr20 66417130 4 + 66533130 ggct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094135 4 + 62195757 ggct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482970 4 - 578057 ggct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110008015 4 - 110113093 ggct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92733761 4 - 92844088 ggct i rheMac8.chr10 C 0 I 297 s macFas5.chr10 96402046 4 + 96509753 ggca i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3674708 4 - 3785965 ggca i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 59234 4 - 179258 ggct i manLeu1.NW_012101652v1 C 0 I 296 s colAng1.NW_012114444v1 5545042 4 - 5823884 ggca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 27825 4 + 372756 ggct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265299 4 + 16356641 ggct i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134381 4 + 1231380 ggct i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664507 4 + 11732439 ggct i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22829136 4 + 22939663 gggt i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e canFam3.chr24 47591061 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e macNem1.NW_012014244v1 16872666 719 - 16982598 I a score=1951865.000000 s hg38.chr20_KI270870v1_alt 92459 263 + 183433 agagtgcagtcgcatgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcctaagtagctgggattacagacacgcaccgccatacccagctaa--ttttgtattttcagtagagacggggcttcaccatgctggccaggctggtctcgaacccctgacctcaagtgatctgcttgcctcagtctcccaaagtgttgggattacagccg--tgagccactgctcccggccgacag--tgttatt s panTro5.chr20 66417134 263 + 66533130 agagtgcagtcgcatgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacagacacgcaccgccacacccagctaa--ttttgtattttcagtagagatggggcttcaccatgctggccaggctggtctcgaacccctgacctcaagtgatctgcctgcctcagtctcccaaagtgttgggattacagccg--tgagccactgctcccggccgacag--tgttatt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094139 263 + 62195757 agagtacagtcgcatgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacagacacgcaccgccacacccagctaa--ttttgtattttcagtagagatggggcttcaccatgctggccaggctggtctcgaacccctgacctcaagtgatctgcctgcctcagtctcccaaagtgttgggattacagccg--tgagccactgctcccggccgacag--tgttatt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 482974 263 - 578057 agagtgcagtcgcatgatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacagacacgcaccgccacacccagctaa--ttttgtattttcagtagagacagggcttcaccatgctggccaggctggtctcgaacccctgacctcaagtgatctgcctgcctcagtctcccaaagtgttgggattacaggcg--tgagccactgctcccgtccgacag--tgctttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110008019 263 - 110113093 ggagtgcagtggcacgatattggctcactgcaagctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtagctgggactacagacacgcaccgccacacccggctaa--ttttgtattttcagtagaggtggggcttcaccatgttgaccaggccgctctcaaactcctgacctcaagtgatctgcctgcctcagtctcccaaagtgttgggattacaggcg--tgagccactgcgcccggccgacgg--tgttatt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92734062 263 - 92844088 ggagtgcagtggcataatattggctcactgcaacctccgcctcccagattcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcgcacaccaccacacccggttaa--ttttgcattttcagtggagatggggctttaccatgttggccaggctggtcttgaattcctgaccttaagcgatctgcctgcttcggcctcccaaagtatttggattacaggcg--tgagccaccgagcctggccatcag--tgttatt i rheMac8.chr10 I 297 C 0 s macFas5.chr10 96402050 263 + 96509753 ggagtgcagtggcataatattggctcaccgcaacctccgcctcccagattcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcgcacaccaccacacccggttaa--ttttgcattttcagtggagatggggctttaccatgttggccaggctggtcttgaattcctgaccttaagcgatctgcctgcttcggcctcccaaagtatttggattacaggcg--tgagccaccgagcctggccATCag--tgttatt i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3674712 263 - 3785965 ggagtgcagtggcataatattggctcactgcaacctccgcctcccagattcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcgcacaccaccacacccggtaaa--ttttgcattttcagtagagatggggctttaccatgttggccaggctggtcttgaattcctgaccttaagtgatctgcctgcttcggcctcccaaagtatttggattacaggcg--tgagccaccgagcctggccatcag--tgttatt i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 59534 263 - 179258 ggagtgcagtggcataatattggctcactgcaacctccgcctcccagattcaagtgattctcctgcctcagcctcccaagtagctgggactacaggtgcacaccaccacacccggttaa--ttttgcattttcagtagagatggggctttaccatgttggccaggctggtcttgaattcctgaccttaagtgatctgcctgcttcggcctcccaaagtatttggattacaggcg--tgagccaccgagcctggccatcag--tgttatt i manLeu1.NW_012101652v1 I 296 C 0 s colAng1.NW_012114444v1 5545046 263 - 5823884 ggagtgcagtagcataatcttggctcactgcaacctccgcctcccagtttcaagtgattctcctgcctcagcctcccaagtagctgggactacaggcacacaccaccacacccggttaa--ttttgcattttcggtagaaatggggctttaccatgttggccaggccagtcttgaattcctgaccttaagtgatctgcctgctttggcttcccaaagtatttggattgcaggtg--tgagccaccgtgcctggccatcag--tgttatt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 27829 265 + 372756 ggagtgcagtgacatgatcttgggtcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcacacaccatcacacttgcctaattttttgtattttcagtagagacggggctttatcatgttggtcaggctgatcttgaactcctgaccttaaatgatctgcccaccttggccttccaaagtgttgggattacagacg--tgagccaccttgcccaactgacag--tgttatt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265303 265 + 16356641 agagtgcagtgacactatcttgggtcactgcaccctctgcctcccaggttcaagtgattctcctgcctcagcctcctgagtagctggcactacaggcacacaccatcacacccgcctaattttttgtattttcagtagagatggggctttaccatgttggtcaggctagtcttgaacttctgacctcaaatgatctgcccgccttggccttccaaagtgttgggattacaggcg--tgagccaccttgcccgactgacag--tgttatt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134385 265 + 1231380 ggagtggagtgacacgatcttgggtcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcctgagtatctgtgactacaggcacacaccatcacagccgcctaattttttgtattttcagtagagatggggctttaccatgttggtcaggctggtcttgaactcctgacctcaaatgatctgcctgccttggtcttccaaagtgttgggattacaggcg--tgagccaccttgcccgactgacag--tgttatt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664511 265 + 11732439 ggagtgcagtgacacgatcttgaatcactgcaacctctgcctcccgggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcacacgccatcacggccgcctaattttttgtattttcagtagagacggggctttaccatgttgatcaagctggtcttgaactcctgacctcaaatgatctgcccgccttggccttccaaagtgctgggattacaggcg--tgagccgccttgcctgactgacag--tgttgtt i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22829140 240 + 22939663 agagtgctgtgg---agtcacagctcacagcaacttcaaactcttgggtttaagtggttctgttgcctcagcctcccaagtagctgggactacaggtgcccaccacaatgcctggcta---ttttttggttgtagttgtcattgttgtttggcaggc---ccaggctggattc-----------------tcatctgctagctctggtgt---atgtggctggcatcctagccacttgagctacCATGCCTAGCTGAAAGATTATTATT i otoGar3.GL873542 C 0 I 262 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e canFam3.chr24 47591061 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e macNem1.NW_012014244v1 16872666 719 - 16982598 I a score=60046.000000 s hg38.chr20_KI270870v1_alt 92722 9 + 183433 ttaactccg s panTro5.chr20 66417397 9 + 66533130 ttaactccg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094402 9 + 62195757 ttaactccg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 483237 9 - 578057 ttaactccg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110008282 9 - 110113093 ttaactccg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92734325 9 - 92844088 ttaactaca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96402313 9 + 96509753 ttaactaca i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3674975 9 - 3785965 ttaactaca i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 59797 9 - 179258 ttaactaca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5545309 9 - 5823884 ttaactaca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 28094 9 + 372756 ttaactaca i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265568 9 + 16356641 ttagctaca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134650 9 + 1231380 ttaactaca i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664776 9 + 11732439 ttaactaca i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e canFam3.chr24 47591061 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e macNem1.NW_012014244v1 16872666 719 - 16982598 I e otoGar3.GL873542 22829380 262 + 22939663 I a score=284486.000000 s hg38.chr20_KI270870v1_alt 92731 34 + 183433 aaagttttaaaccttgttgaagtccaatatatta s panTro5.chr20 66417406 34 + 66533130 aaagttttaaaccttgttgaagtccaatatatta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094411 34 + 62195757 aaagttttaaaccttgttgaagtccaatatatta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 483246 34 - 578057 aaagttttaaaccttgttgaagtccaatatatta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110008291 33 - 110113093 aaagttttaaacctt-ttgaagtccaatatatta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92734334 34 - 92844088 aaagttttgaaccttgttgaagtccaatatatta i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96402322 34 + 96509753 aaagttttgaaccttgttgaagtccaatatatta i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3674984 34 - 3785965 aaagttttgaaccttgttgaagtccaatatatta i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 59806 34 - 179258 aaagttttgaaccttgttgaagtccaatatatta i manLeu1.NW_012101652v1 C 0 I 2 s colAng1.NW_012114444v1 5545318 34 - 5823884 aaagttttgaaccttgttgaagtccattatatta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 28103 34 + 372756 aaagttttaaaccttgttgaagtccaatatatta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265577 34 + 16356641 aaagttttaaaccttgttgaagtccgatgtatta i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134659 33 + 1231380 aaag-tttaaaccttgttgaagtccaatatatta i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664785 34 + 11732439 gaagttttaagccttgttgaagtccagtatgtta i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47591061 34 + 47698779 aaagttttaaactttgatgaaatccaatttatcc i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e macNem1.NW_012014244v1 16872666 719 - 16982598 I e otoGar3.GL873542 22829380 262 + 22939663 I a score=1329885.000000 s hg38.chr20_KI270870v1_alt 92765 152 + 183433 ctttttttctttaatggcttgtagtgttgttgtcatagctaagaaaccattgctgaacccagagtcggaaagatttaccgcggtgttttctaggagttttggttcttacatttacatatgtgatccagtgcgagctaatttttgagagaggt s panTro5.chr20 66417440 152 + 66533130 ctttttttctttaatggcttgtagtgttgttgtcatagctaagaaaccattgctgaacccagagtcggaaagatttaccgcggtgttttctaggagttttggttcttacatttacatatgtgatccagtgcgagctaatttttgagagaggt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094445 152 + 62195757 ctttttttctttaatggcttgtagtgttgttgtcatagctaagaaaccattgctgaacccagagtcggaaagatttaccgcggtgttttctaggagttttggttcttacatttacatatgtgatccagtgcgagctaatttttgagagaggt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 483280 152 - 578057 ctttttttctttaatggcttgtactgttgttgtcatagctaagaaaccattgctgaacccagagtcggaaagatttaccgctgtgttttctaggagttttggtttttacgtttagatatgtgatccagtgcgacttaatttttgagagaggt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110008324 152 - 110113093 ctttttttctttaatggcttgtagttttgttgtcatagctaagaaaccattgctgaacccaaagtcggaaagatctatgcctgtgttttctaggagttttggttcttacatttagatatgtgatccagtgcgagttaatttttgagagaggt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92734368 152 - 92844088 ctttttttctttaatggcttgtagttttgttgtcatagctaagaaaccattgcttaacccaaagtcagaaggatttacccctgtgttttctaagagtttaggttcttacatttagatatgtgatccagtgtgagttaatttttgagagggtt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96402356 152 + 96509753 ctttttttctttaatggcttgtagttttgttgtcatagctaagaaaccattgcttaacccaaagtcagaaggatttacccctgtgttttctaagagtttaggttcttacatttagatatgtgatccagtgtgagttaatttttgagagggtt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16873385 152 - 16982598 ctttttttctttaatggcttgtagttttgttgtcatagctaagaaaccattgcttaacccaaagtcagaaggatttacccctgtgttttctaagagtttaggttcttacatttagatatgtgatctagtgtgagttaatttttgagagggtt i macNem1.NW_012014244v1 I 719 C 0 s cerAty1.NW_012001373v1 3675018 152 - 3785965 ctttttttctttaatggcttgtagttttgttgtcatagctaagaaaccattgcttaacccaaagtcagaaggatttacccctgtgttttctaagagtttaggttcttacatttagatatgtgatccagtgtgagttaatttttgagagggtt i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 59842 152 - 179258 ttttttttttttaatggcttgtagtttcgttgtcatagctaagaaaccattgcttaacccaaagtcagaaggatttacccctgtgttttctaagagtttaggttcttacatttagatatgtgatccagtgtgagttaatttttgagagggtt i manLeu1.NW_012101652v1 I 2 C 0 s colAng1.NW_012114444v1 5545352 152 - 5823884 ctttttttctttaatggcttgtagttttgttgtcatagctaagaaaccattgcttaacccaaagtcagaaggatttacccctgtgttttctaagagttttggttcttacatttagatatgtgatccagtgtgagttaatttttgagagggtt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 28137 150 + 372756 --ttatttttttaatggcttgtactgttgttgtcatagccaagaaaccattgcttaacccagagtcagaaagatttactcctaagttttttaagagttttggttcttacatttagatatgtgatccagtgtgagttaatttttgacaggggt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265611 150 + 16356641 --ttatttttttaatggcttgtacttttgttgtcatagccaagaaaccattgcttaacccagagtcagaaagatttgctcctaagttttttaagagttttggttcttacatttaaatatgtgatccagtgtgagttaatttttgacaggggt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134692 150 + 1231380 --ttatttttttaatggcttgtacttttgtggtcatagccaagaaaccattgcttaacccagagtcagaaagatttactcctaagttttttaagagttttggttcttacgtttagatgtgtgatccagtgtgagttaatttttgacagtggt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664819 136 + 11732439 --ttatttgtttaatggcttgtgcttttgctgt--------------cattgcttaacgcagagtcagaaagattttctcctcagtgttttcagagttttggttcttacatttagatatgtgctccagtgtgagttaatttttgacaggggt i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47591095 151 + 47698779 -atttgtttttttattgcttatgcttttggcattgcacctaagaaaccactgcctaacccaaagtcaggaagatttactccaatgttacatatgagttttagcttttatgtttagatttgggactcattgtgtgttaatttttgtgcatggt i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e otoGar3.GL873542 22829380 262 + 22939663 I a score=348312.000000 s hg38.chr20_KI270870v1_alt 92917 47 + 183433 ccaacttca------tttttttttttgatatctagttgtcctggcacgtttgt s panTro5.chr20 66417592 49 + 66533130 ccaacttca----tttttttttttttgatatctggttgtcctggcacatttgt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094597 48 + 62195757 ccaacttca-----ttttttttttttgatatctggttgtcctggcacatttgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 483432 48 - 578057 ccaacttca-----ttttttttttttgatatctagttgtcctagcacatttgt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110008476 50 - 110113093 ccaacttca---ttttttttttttttgatatctagttgtcctagcacatttgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92734520 50 - 92844088 ccaacttca---ttttttttttttttgatatctagttgtcctagtgcatttgt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96402508 53 + 96509753 ccaacttcatttttttttttttttttgatatctagttgtcctagtgcatttgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16873537 49 - 16982598 ccaacttca----tttttttttttttgatatctagttgtcctagtgcatttgt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3675170 46 - 3785965 ccaacttca-------ttttttttttgatatctagttgccctagtgcatttgt i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 59994 49 - 179258 ccaacttca----tttttttttttttgatatctagttgtcctagtgcatttgt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5545504 45 - 5823884 ccaacttca--------tttttttttgatatctagttgtcctagtgcatttgt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 28287 45 + 372756 ccaagttca--------ttttttcaggatatctagttgtcctagcacatttgt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265761 45 + 16356641 ccaagttca--------ttttttcaggatatctagttgtcctagcacatttgt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134842 45 + 1231380 ccaagttca--------ttttttcaggatatctagttgtcctagcacatttgt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2664955 45 + 11732439 ccaagttca--------ttttttcaagatatctagttttcctagcacatttgt i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e canFam3.chr24 47591246 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e otoGar3.GL873542 22829380 262 + 22939663 I a score=1484734.000000 s hg38.chr20_KI270870v1_alt 92964 183 + 183433 tgaaaagacag-tttttttcccattaaattgtttttgtgccattgtcaaaaatcaattgatcattaatagagggggttacttctggactctcaattatgtcccacttatccatatgcccgtcctgatgctagtaacacattgccttgattactgcagctttgtagtaagtttggaaactgagaa s panTro5.chr20 66417641 183 + 66533130 tgaaaagacag-tttttttcccattaaattgtttttgtgccattgtcaaaaatcaattgatcatcaatagagggggttacttctggactctcaattatgtcccacttctctatatgcccgtcctgatgctagtaacacattgccttgattactgcagctttgtagtaagtttggaaactgagaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094645 183 + 62195757 tgaaaagacag-tttttttcccattaaattgtttttgtgccattgtcaaaaatcaattgatcatcaatagagggggttacttctggactctcagttatgtcccacttctctatatgcccgtcctgatgctagtaacacattgccttgattactgcagctttgtagtaagtttggaaactgagaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 483480 183 - 578057 tgaaaagacagttttttttcccattaaattgtttttgtgccattgtcaaaaatcagttgatcatcaatagagggggttacttctggactctcaattatgtcccacttatctatatgcccgtcctgatgctagtaacacattgccttgattactgcagctttgtagtaagttt-gaaactgagaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110008526 183 - 110113093 tgaaaagacag-tttttttcccattaacttgtttttgtttcgttgtcaaaaatcaattgatcatcaatagagggggttatttctggactctcaattctgtcccacttatctatatgcccgtccttatgctagtaacacattgccttgattactgcagctttgtagtaagtttggaaactgagaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92734570 183 - 92844088 tgaaaagactg-gttttttcccattaaattgtttttgtgccattgtcaaaaatccattgatcatcagtagagggggttatttctggactctcaattctgtcccacttatctacatgcccgtcctcatgctagtagcacattgtcttgattactgcagctttgtagtaagtctggaaattgagaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96402561 183 + 96509753 tgaaaagactg-gttttttcccattaaattgtttttgtgccattgtcaaaaatccattgatcatcagtagagggggttatttctggactctcaattctgtcccacttatctacatgcccgtcctcatgctggtagcacattgtcttgattactgcagctttgtagtaagtctggaaattgagaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16873586 183 - 16982598 tgaaaagactg-gttttttcccattaaattgtttttgtgccattgtcaaaaatccattgatcatcagtagagggggttatatctggactctcaattctgtcccacttacctacatgcccgtcctcacgctggtagcacattgccttgattactgcagctttgtagtaagtctggaaattgggaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3675216 183 - 3785965 tgaaaagactg-tttttttcccattaaattgtttttgtgccattgtcaaaaatccattgatcatcagtagagggggttatttctggactctgaattctgtcccatttatctacatgcccgtcctcatgctagtcgcacattgccttgattactgcagctttgtagtaagtctggaaattgagaa i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 60043 181 - 179258 tgaaaagactg-gttttttcccattaaattgtttttgtgccattgtcaaaaatccattgatcatcagtaga-ggggttatttctggactctcaattctgtcccacttatctacatgcccgtcctcatgctagtggcacattgcctt-attactgcagctttgtagtaagtctggaaattgagaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5545549 182 - 5823884 tgaaaagacca-gttttttcccattaaattgtttttgtgccattgtcaaaaatccattgattatcagtagagggggttacttctggactctcaattctgtgccacttatctatatg-ctgccctcatgctagtagcacattgccttgattactgcagctttgtagtaagtctggaaatcgtgta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 28332 177 + 372756 tgaaaagacac-tttttttcccattagatt-ttttaatgcctttgt-gaaaagcaagtgaccatcaatata--gggttattcctggactctcaattctg-cccacttacctacatg-ccatccttatgctagtaccacattgccttgatgactgcagctttgtagtaagttttgaaattgagaa i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265806 179 + 16356641 tgaaaagacag-tttttttcccattaaatt-ttttagtgcctttgt-gaaaatcaactgaccatcaataca-ggggttattcctggactcccagttctgtcccacttccctgcatg-ccatccttatgctagtaccacattgccctgattactgcagctctgtagtaagttttgaaattgagaa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1134887 177 + 1231380 tgaaaagacag--ttttttcccattaaatt-ttttagtgcctttgt-gaaaatcagccgaccatcaatacg--gggttattcgtggactctcagttctgtcccacttccccacatg-ccaaccttgtgctggtaccacattgccttgatcactgcagctttgtagtaagttttgaaattgagaa i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2665000 176 + 11732439 cgagaagacag--tttttgcccattaaatt-tttc-gtgcctttgt-gaaaatcagctgaccatcaataca--gggtcattcctggactctcagctctgtcccacttacctacatg-ccacccttatgctaataccacgttgccttgattactgcagctgcgtagtaagttttgaaattgagaa i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22829642 180 + 22939663 tgaaaagatta--tcctttcccatcaaattgtcttagcactattgtcagaaatcttttgaccacgagtatgaggagtttcttctgcactctcagttccagcccagttgtctatgtg--tgtccttacgttagttccacattgtcctgatcaccacagctttgtagtaagttttgaaatcgagaa i otoGar3.GL873542 I 262 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e canFam3.chr24 47591246 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=13600.000000 s hg38.chr20_KI270870v1_alt 93147 1 + 183433 g s panTro5.chr20 66417824 1 + 66533130 g i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094828 1 + 62195757 g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 483663 1 - 578057 g i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110008709 1 - 110113093 g i nomLeu3.chr13 C 0 M 100 s rheMac8.chr10 92734753 1 - 92844088 g i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96402744 1 + 96509753 g i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16873769 1 - 16982598 g i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3675399 1 - 3785965 g i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 60224 1 - 179258 g i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5545731 1 - 5823884 g i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 28509 1 + 372756 g i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265985 1 + 16356641 g i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1135064 1 + 1231380 g i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2665176 1 + 11732439 g i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22829822 1 + 22939663 g i otoGar3.GL873542 C 0 I 2 s canFam3.chr24 47591246 1 + 47698779 g i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=598699.000000 s hg38.chr20_KI270870v1_alt 93148 66 + 183433 tgtgtcgtccaactttgctctttttcagaattgttttgactagtctatattccttgaattgccata s panTro5.chr20 66417825 66 + 66533130 tgtgtcgtccaactttgctctttttcagaattgttttggctagtctatattccttgaattgccata i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094829 66 + 62195757 tgtgtcgtccaactttgctctttttcagaattgttttggctagtctatattccttgaattgccata i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 483664 66 - 578057 tgtgtcgtccaactttgctctttttcagaattgttttggctagtctatattccttgaattgccata i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92734754 66 - 92844088 tatgtcttccaacttttctctttttcaaaattgttttggctagtctatatttcttgaattgccata i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96402745 66 + 96509753 tatgtcttccaacttttctctttttcaaaattgttttggctagtctatatttcttgaattgccata i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16873770 66 - 16982598 tatgtcttccaacttttctctttttcaaaattgttttggctagtctatatttcttgaattgccata i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3675400 66 - 3785965 tatgtcttccaacttttctctttttcaaaattgttttggctagtctatatttcttgaattgccata i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 60225 66 - 179258 tatgtcttccaacttttctctttttcaaaattgttttggctagtctatatttcttgaattgccata i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5545732 66 - 5823884 tatgtcttccaacttttctctttttcaaaattgttttggctagtcaatatttcttgaattgccgta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 28510 66 + 372756 tgtgtctcccaactttgctctttttcaaaattgttttggctagtctgtgttacttgaattgccata i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16265986 66 + 16356641 tgtgtcttccaactttgctctttttcaaaattgttttggctagtctatattacttgaattgccatg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1135065 66 + 1231380 tgtgtcttccaactttgctctttttcaaaattgttttggctagtctacattacttgaattgtcata i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2665177 66 + 11732439 tgtgtcttccaactttgctctttttcaaagttgttttggctagtctatattacttgaattgccata i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22829825 66 + 22939663 tgagtctttcaaccttgttctttttcaaaattgttttggctattctatattccttgaataaccata i otoGar3.GL873542 I 2 C 0 s canFam3.chr24 47591247 53 + 47698779 tgaggggtccaacttc-------------attgttttggttattctaagttcctttaattgccaaa i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e nomLeu3.chr13 110008710 100 - 110113093 M a score=3594015.000000 s hg38.chr20_KI270870v1_alt 93214 435 + 183433 caaatttttagaatgagtttgtcagtttttgcaaacagaacaAAACAACACAGCCAGAGAggtcagaaatggtcagattctggtgagatttagaaaataacattggcaggatttggggcc--aaggatgaccctcagggttctggcttgagga----gctgATGACTGAAGAGGGGAAGAGGAAAACCCCACGTCACGTAAGAAGCAGATATTGTGGGCAGCGAGG-AAGC-------AAAAAGGAGAAGCCATCTGACATGGGGTGGCCG----GGTGGC-CAGGAGG---------AGCCTGTACAGG--TGACCGACAAGGTCA-GGGGC-------------GAGTGTT-TGCCACAGAAGGGGG-------TGAACAGACACGCACCGCAGTGATGTCTAGT-GGGCCCTCACGTGCCCTGTGAACATGAAGCCGCCTGTTGTTCCAGT--AGAG----------GGATGTGGGTGGAGGCCAACTGTGGTGGGG s panTro5.chr20 66417891 435 + 66533130 caaatttttagaatgagtttgtcagtttttgcaaacagaacaAAACAACACAGCCAGAGAggtcagaaatggtcagattctggtgagatttagaaaataacattggcaggatttggggcc--aaggatgaccctcagggttctggcttgagga----gctgATGACTGAAGAGGGGAAGAGGAAAACCCCACGTCACGTAAGAAGCAGATATTGTGGGCAGAGAGG-AAGC-------AAAAAGGAGAAGCCATCTGACATGGGGTGGCCG----GGTGGC-CAGGAGG---------AGCCTGTACAGG--TGACCGACAAGGTCA-GGGGC-------------GAGTGTT-TGCCACAGAAGGGGG-------TGAACAGACACGCAACGCAGTGATGTCTAGT-GGGCCCTCACGTGCCCTGTGAACATGAAGCCGCCTGTTGTTCCAGT--AGAG----------GGATGTGGGTGGAGGCCAACTGTGGTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62094895 435 + 62195757 caaatttttagaatgagtttgtcagtttttgcaaacagaacaAAACAACACAGCCAGAGAggtcagaaatggtcagattctggtgagatttagaaaataacattggcaggatttggggcc--aaggatgaccctcagggttctggcttgagga----gctgATGACTGAAGAGGGGAAGAGGAAAACCCCACGTCACGTAAGAAGCAGATATTGTGGGCAGAGAGG-AAGC-------AAAAAGGAGAAGCCATCTGACATGGGGTGGCCG----GGTGGC-CAGGAGG---------AGCCTGTACAGG--TGACCGACAAGGTCA-GGGGC-------------GAGTGTT-TGCCACAGAAGGGGG-------TGAACAGACACGCAACGCAGTGATGTCTAGT-GGGCCCTCACGTGCCCTGTGAACATGAAGCCGCCTGTTGTTCCAGT--AGAG----------GGATGTGGGTGGAGGCCAACTGTGGTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 483730 435 - 578057 caaatttttagaatgagtttgtcagtttttgcaaacagaacaAAACAACACAGCCAGAGAggtcagaaatagtcagattctggtgagatttagaaaataacattggcaggatttggggcc--aaggatgaccctcagggttctggcttgagca----gctgATGACTGAAGAGGGGAAGAGGAAAACCCCACGTCACGTAAGAAGCAGATATTGTGGGCAGAGAGG-AAGC-------AAAAAGGAGAAGCCATCTGACATGGGGTGGCCG----GGTGGC-CAGGAGG---------AGCCTGTACAGG--TGACCGACAAGGTCA--GGGC-------------GAGTGTT-TGCCACAGAAGCGGG-------GGAACAGACACGCACCGCAGTGATGTCTAGTGGGGCCCTCACGTGCCCTGTGAACGTGAAGCCGCCTGTTGTTCCAGT--AGAG----------GGATGTGGGTGGAGGCCAACTGTGGTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110008810 442 - 110113093 CACATTTTTAGAATGAGTTTGTCAGTTTTTGCAGACAGAACAAAACAACATAGCtggagaggtcagaaattgtcagattctggtgagatttagaaaataacattggcaggatttgGGGCC--AAGGATGACCCTCAGGGTTCTGTCTTGAGGA----GCTGATGACTGAAGAGGGGAAGAGGAAAACCCCGAGTCACATAAGAAGCAGATACTGT-GGCAGAGAGG-AAGC-------AAAAAGGAGAGGGCGTCTGACATGGGGTGGCCA----GGTGGC-CAGGAGG---------AGCCCGTACAGG--TGACTGACAAGGTCG--GGGC-------------GAGTGTT-TGCCACAGAAGCGGG--------GAACAGACACGCACTGCAGTGATGTCTAGT-GGGCCCTCACGTGCCCTGTGAACATGAAGCCGCCTGTTGTTCCAGT--AGAGGGATGTGGGTGGATGTGGGTGGAGGTCAACTGTGGTGGGG i nomLeu3.chr13 M 100 C 0 s rheMac8.chr10 92734820 417 - 92844088 -tgaattttagaatgagtttgtcagtttttgcaaacagaacaAAACAACACAGCtggagaggtcagaagtggtcagattctggtgagatttagaaaataactttggcaggatttgGGGCC--AAGGATGACCCTCAAGGTTCTGGCTT-AGGA----GCTGATGACTGAAGAGGGGAAGAGGAAAACCCCAAGTCCCGTGAGAAGCAGATATTGTGGGCAGAGAGG-AAGC-------AAAAAGGAGAGGGCGTCTGACATG--------G----GGTGGC-TGGGTG-----------GTCGGTACAGG--TGACCGACAC-GTTG-GGGGT-------------GAGTGTT-TGCCACAGAAGGAG---------GGACAGACACGCACTGCGGTGATGCGT-AT-GGGCCCTCACATGCCCTGTGAACATGAAGCCACCTGTTGTTTCAGT--AGAG------------ATGTGGGTGGAGGCCAACTGTGCTGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96402811 427 + 96509753 -tgaattttagaatgagtttgtcagtttttgcaaacagaacaAAACAACACAGCtggagaggtcagaagtggtcagattctggtgagatttagaaaataactttggcaggatttgGGGCC--AAGGATGACCCTCAAGGTTCTGGCTT-AGGA----GCTGATGACTGAAGAGGGGAAGAGGAAAACCCCAAGTCCCGTGAGAAGCAGATATTGTGGGCAGAGAGG-AAGC-------AAAAAGGAGAGGGCGTCTGACATGGGGTGGCTG----GGTGGC-CGGGAGG---------CGCCGGTACAGG--TGACCGACAC-ATTG-GGGGT-------------GAGTGTT-TGCCACAGAAGGAG---------GGACAGACACGCACTGCGGTGATGCGT-AT-GGGCCCTCACATGCCCTGTGAACATGAAGCCGCCTGTTGTTTCAGT--AGAG------------ATGTGGGTGGAGGCCAACTGTGCTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16873836 419 - 16982598 -tgaattttagaatgagtttgtcagtttttgcaaacagaacaAAACAACACAGCtggagaggtcagaagtggtcagattctggtgagatttagaaaataactttggcaggatttgGGGCC--AAGGATGACCCTCAAGGTTCTGGCTT-AGGA----GCTGATGACTGAAGAGGGGAAGCGGAAAACCCCAAGTCCCGTGAGGAGCAGATATTGTGGGCAGAGAGG-AAGC-------AAAAAGGAGAGGGCGTCTGACATG--------G----GGTGGC-CGGGAGG---------CGCCGGTACAGG--TGACCGACAC-GTTG-GGGGT-------------GAGTGTT-TGCCACAGAAGGAC---------GGACAGACACGCACTGCGGTGATGCGT-AT-GGGCCCTCACATGCCCTGTGAACATGAAGCCGCCTGTTGTTTCAGT--AGAG------------ATGTGGGTGGAGGCCAGCTGTGCTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3675466 427 - 3785965 -tgaattttaggatgagtttgtcagtttttgcaaacagaacaAAACAACACAGCtggagaggtcagaaatggtcagattctggtgagatttagaaaataactttggcaggatttgGGGCC--AAGGATGACCCTCAAGGTTCTGGCTT-AGGA----GCTGATGACTGAAGAGGGGAAGAGGAAAACCCCAAGTCCCGTGAGAAGCAGATATTGTGGGCAGAGAGG-AAGC-------AAAAAGGAGAGGGCGTCTGACATGGGGTGGCTT----GGTGGC-CGGGAGG---------CGCCGGTACAGG--TGACCGACAC-GTTG-GGGGT-------------GAGTGTT-TGCCACAGAAGGAG---------GGACAGACACGCACTGCGGTGATGCGT-AT-GGGCCCTCACATGCCCTGTGAACATGAAGCCGCCTGTTGTTTCAGT--AGAG------------ATGTGGGTGGAGGCCAACTGTGCTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 60291 427 - 179258 -tgaactttagaatgagtttgtcagtttttgcaaaCAGAACGAAACAACACAGCtggagaggtcagaaatggtcagattctggtgagatttagaaaataactttggcaggatttgGGGCC--AAGGATGACCCTCAAGGTTCTGGCTT-AGGA----GCTGATGACTGAAGAGGGGAAGAGGAAAACCCCAAGTCCCGTGAGAAGCAGATATTGTGGGCAGAGAGG-AAGC-------AAAAAGGAGAGGGCGTCTGACATGGGGTGGCTG----GGTGGC-CGGGAGG---------CGCCGGTACAGG--TGACCGACAC-GTTG-GGGGT-------------GAGTGTT-TGCCACAGAAGGAG---------GGACAGACACGCACTGTGGTGATGCGT-AT-GGGCCCTCACATGCCCTGTGAACATGAAGCCGCCTGTTGTTTCAGT--AGAG------------ATGTGGGTGGAGGCCAACTGTGCTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5545798 431 - 5823884 -tgaattttagaatgagtttgtcagtttttgcaaacagaacaAAACAACACAGCtggagaggtcagaaatggtcagattctggtgagatttagaaaataacattggcaggatttgGGGCT--AAGGATGACCCTCAAGGTTCTGGCTT-AGGA----GCTGATGACTGAAGAGGGGAAGAGGAAAACCCCAAGTCCCATAAGAAGCAGATATTGTGGGCAGAGAGG-AAGC-------AAAAAGGAGAGGGCATCTGACATGGGGTGGCTG----GGTGGC-CAGGAGG---------CGCCTGTACAGG--TGACCGACAAGGTCG-GGGGT-------------GAGTGTT-TGCCACAGAAGGAG---------GGACAGACACGCACTGCAGTGATGCCTCGT-GGACCCTCACATGCCCTGTGAACAAGTAGCCGCCTGTTGTTTCAGTAGAGAG------------ATGTGGGTGGAGGCCAACTGTGGTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 28576 428 + 372756 -tgagttttagaatgagtttgtcaatttttgcaaacagaacaAAACAACACAGCTGGAGAGGTCAGAAATGGTCACATTCTGGTGAGATTTAGGAAACCATGTTGGCAGGATTTGGGGCC--AAGGATGACCCTCAGGGTTCTGTCTTGAGGA----GCTGATGACTGAAGATGGGAAGAGGAATG-CCCAAGTCACATACCAAGCAGAGATTGTGGGCAGAGGGG-AAGC-------AGAGAGGACAGGGTATCTGCCGTGGGGTGGCCA-----GTGGC-CAGGAGG---------AAACTATACAGT---GACTGACAAGGTCG-GGGGC-------------AGGTGTT-TGCCACAGGAGTGGG--------GAACAGACGTGCATTTCAGCAGTGCATAGT-GGGCCCTCATGTGCCCTGTG-ACGTGACGCCGGCTGCTGTTTCAGT--AGTG----------GGAT-TGGGTGGAGGCCAGTTGTGCTGGGG i calJac3.chrUn_GL286459 C 0 I 10 s saiBol1.JH378156 16266052 429 + 16356641 -tgagttttagaatgcgtttgtcaatttttgcaaacagaacaAAACCACACAGCtggagaggtcagaaatggccagattctggtgagatttaggaagcaacattggcaggatttgGGGCC--AAGGCTGACCCTCAGGGTTCTGGCTTGAGGA----GCTGATGACTGAAGATGGGAAGAGGAATG-CCCAAGTCACATACGAAGCAGAGATTGTGGGCAGAGAGG-ACGC-------AGAGAGGAGAGGGTGTGGGACGTGGGGTGGCCA-----GTGGC-CAGGAGG---------AACCAATGCAGG---GGCTGACAAGGTC--GGGGC-------------CGGTGTT-TGCCACAGAAGTGGG--------GAACAGACACGCATTTCAGCAACGCGTAGT-GGGCCCTCACGTGCCCTGTGAATGTGACACCGGCTGCTGTTTCAGT--AGTG----------GGATGTGGGTGGAGGCCAGTTGTGCTGGGG i saiBol1.JH378156 C 0 I 10 s cebCap1.NW_016107870v1 1135131 427 + 1231380 -tgagctttagagtgagtttgtcaatttttgcaaacagaacaaa---acacagctggAGAggtcagaaatggtcagattctggtgagatttaggaaacaacattggcaggatttgGGGCC--AAGGATGACCTTCAGGGTTCTGGCTTGAGGA----GTTGATGACTGAAGATGGGAAGAGGAATG-CCCAAGTCGCATACGAAGCAGAGATTGTGGGCAGAGAGG-AAGC-------AGAGAGGAGAGGGTGTCTGATGCAGGGTGGCCA-----GTCGC-CAGGAGG---------AACCTATACAGG---GACTGACAAGGTCG-GGGGC-------------GGGTGTT-TGCCGCAGGCGTGGG--------GAACAGACACGCATTTCAGCAACGCGTAGT-GGGCCCTCATGTGCCCTGTGAACGTGACGCCCGCTGCTGTTTCAGT--AGTG----------GGTTGTGGGTGGAGGCCAGCTGTGCTGAGG i cebCap1.NW_016107870v1 C 0 I 19 s aotNan1.NW_018500483v1 2665243 419 + 11732439 -tgagttttagaatgagtttgtcaatttttgcaaacagaacaAAACAACACAGCTGGAGAGGTCAGAAATGTTCAGATTCTGGTGAGATTTAGGGAAGAACATTGGCAGGATTTGGGGCC--AAGGATGACCCTCGGGGTTCTGGCTTGAAGA----GTTGATGACTGAAGATGGGAAGAGGAATG-CCCAAGTCACATACGAAGCAGAGATTGTGG------------GC-------AGAGAGGAGAGGGTGTCTGACGTGGGGTGGCCC-----GTGGC-CAGGAGG---------AGCCTATACAGT---GACTGACGAGGTCG-GGGGC-------------AGGTGTT-TGCCACAGGAGTGGG--------GAACAGACATGCATCTCAGCAACGCGCAGT-GGGCCCTCATGTGCCCTGTGAACAAGACGCCGACTGCTGTTTCAGT--AGTG----------GGATGTGGGTGGAGGCCGGTTGTGCTGGGG i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22829891 401 + 22939663 -tgaattttagaaggagtttgttaaattttgca-acaaaATAAAACAGAACAGCTGGAGAGGTCAGAAATGGTCAGATTTTGGCAAGATTCAGAAAATAACGTTGGCAGGACCTGGGATCTTAAGGC---------AGGTTCTGGGTTAAGGA----GATGAAGGCTGAAAAGG------------------GTCTTGTGAGAAGCAGACACAGTGGGCAGAGAGGCCATC-------ACAGAGGAGAGGGCTTCTGGCGTCTGGTGGCAG-----GTGGC-CATGTGGCACAAGAAAAGCCTGCACAGA--TGATGGAGGAGATAATGGGCT-------------GAGTGTTATACCGCAGGAGGGG----------------CACATAGTGCAGCA---CATAGT-GGA-CCTCATGTGCCGTGTGGATGTGATGCAG-TTGCTGTTTGGAT--GCAG------------AATGAGGTGGGG--CTGCTGTAGTGAGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47591300 452 + 47698779 -tggattttagagtcagtgtgtcaatctctgaaaacaaaaca-------acAGCTTGAGAGGACAGAAGTGGTCAGATTCTGGTAAGATGCAGCAAATAGCAATGGCAGGATTTGGGACC--CAAGGCAGTCCCCATTGTTGATGCTTGAGGAACTGACTGATGGCTGAGCCTGGGGA-AGGAAAAGCTTGAGTCCTGTGAGAAGCTGGTGTTATGAGCAGAGATG-GAGCTCCTCCGTGGAAGAGGAGGCCGTGGGATGGCAGATGGGAGAAGGAGTGGAGCAGAAAG---------AGCCTGCATGGTGTCGGAGGAGAGGCTCG-GGTGCAGGGGGACGTAGGGAGCATC-CACCAGACAAGGAGGGAGTGAGTGTGCAGTGGTGCACAATGACGATGTGACAT-AGACGTTAGTG------GTGATCTT----CCACCCCCTGTTTTGGT--GGAG----------GGCTCTA-GTGGAGA-CAATTGGAGTGGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=18449.000000 s hg38.chr20_KI270870v1_alt 93649 3 + 183433 AGT s panTro5.chr20 66418326 3 + 66533130 AGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62095330 3 + 62195757 AGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484165 3 - 578057 AGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009252 3 - 110113093 AGT i nomLeu3.chr13 C 0 I 16 s rheMac8.chr10 92735237 3 - 92844088 AGT i rheMac8.chr10 C 0 I 16 s macFas5.chr10 96403238 3 + 96509753 AGT i macFas5.chr10 C 0 I 16 s macNem1.NW_012014244v1 16874255 3 - 16982598 AGT i macNem1.NW_012014244v1 C 0 I 16 s cerAty1.NW_012001373v1 3675893 3 - 3785965 AGT i cerAty1.NW_012001373v1 C 0 I 16 s manLeu1.NW_012101652v1 60718 3 - 179258 AGT i manLeu1.NW_012101652v1 C 0 I 16 s colAng1.NW_012114444v1 5546229 3 - 5823884 AGT i colAng1.NW_012114444v1 C 0 I 16 s calJac3.chrUn_GL286459 29014 3 + 372756 AGT i calJac3.chrUn_GL286459 I 10 I 6 s saiBol1.JH378156 16266491 3 + 16356641 AGT i saiBol1.JH378156 I 10 I 6 s aotNan1.NW_018500483v1 2665663 2 + 11732439 TG- i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22830292 3 + 22939663 GGT i otoGar3.GL873542 C 0 I 7 s canFam3.chr24 47591752 3 + 47698779 CGT i canFam3.chr24 C 0 I 34 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e cebCap1.NW_016107870v1 1135558 19 + 1231380 I a score=825604.000000 s hg38.chr20_KI270870v1_alt 93652 101 + 183433 GAAGCGTAGTTATGAAGC-----------------AGGAGG-----AGATGGAGAGGGGGCTGGGCAGGGGCGT-GAGGTCCAAAGAGACTGTG-T--TTTTAAACA-------TGGA-TGCCTCAAGCCAGTTG s panTro5.chr20 66418329 101 + 66533130 GAAGCGTAGTTATGAAGC-----------------AGGAGG-----AGATGGAGAGGGGGCTGGGCAGGGACGT-GAGGTCCAAAGAGACTGTG-T--TTTTAAACA-------TGGA-TGCCTCAAGCCTGTTG i panTro5.chr20 C 0 I 1907 s panPan2.chr20 62095333 101 + 62195757 GAAGCGTAGTTATGAAGC-----------------AGGAGG-----AGATGGAGAGGGGGCTGGGCAGGGACGT-GAGGTCCAAAGAGACTGTG-T--TTTTAAACA-------TGGA-TGCCTCAAGCCTGTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484168 101 - 578057 GAAGCGTAGTTATGAAGC-----------------AGGAGG-----AGATGGAGAGGGGGCTGGGCAGGGACGT-GTGGTCCAAAGAGACTGTG-T--TTTTAAACA-------TGGA-TGCCTCAAGCCTGTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009271 98 - 110113093 GAAGCGTAGTTATGAAGC--------------------AGG-----AGATGGAGAGGGGGCTGGGCAGGGACGT-GCCGTCCAAAGAGACTGTG-T--TTTTAAATA-------TGGA-TGCCTCAAGCCTGTTG i nomLeu3.chr13 I 16 C 0 s rheMac8.chr10 92735256 99 - 92844088 GGTGTGTAGTTATGAAGC-----------------AGGAGG-----AGATGGAGAGGGGGCCGGGCCGGGACGT-GTGGTCAAGAGAGACTG---T--TTTTAAACA-------TGGA-TGCCTCAAGCCTGTTG i rheMac8.chr10 I 16 C 0 s macFas5.chr10 96403257 99 + 96509753 GGTGTGTAGTTATGAAGC-----------------AGGAGG-----AGATGGAGAGGGGGCCGGGCCGGGACGT-GCGGTCAAGAGAGACTG---T--TTTTAAACA-------TGGA-TGCCTCAAGCCTGTTG i macFas5.chr10 I 16 C 0 s macNem1.NW_012014244v1 16874274 99 - 16982598 ggtgtgtagctatgaagc-----------------aggagg-----agatggagagggggctgggccgggacgt-gcggtcaagagagactg---t--ttttaaaca-------tgga-tgcctcaagcctgttg i macNem1.NW_012014244v1 I 16 C 0 s cerAty1.NW_012001373v1 3675912 99 - 3785965 GGTGTGTAGTTATGAAGC-----------------AGGAGG-----AGATGGAGAGGGGGCCGGGCCGGGACGT-GTGGTCAAGAGAGACTG---T--TTTTAAACA-------TGGA-TGCCTCAAGCCTGTTG i cerAty1.NW_012001373v1 I 16 C 0 s manLeu1.NW_012101652v1 60737 99 - 179258 GGTGTGTAGTTATGAAGC-----------------AGGAGG-----AGATGGAGAGGGGGCCGGGCCGGGACGT-GTGGTCAAGAGAGACTG---T--TTTTAAACA-------TGGA-TGCCTCAAGCCTGTTG i manLeu1.NW_012101652v1 I 16 C 0 s colAng1.NW_012114444v1 5546248 102 - 5823884 GATGTGTAGTTATGAAGC-----------------AGGAGG-----AGATGGAGAGGGAGCCGGGCAGGGACGT-GCGGTCAAGAGAGACTGTCTT--TTTTAAACA-------TGGA-TGCCTCAAGCCTGTTG i colAng1.NW_012114444v1 I 16 C 0 s calJac3.chrUn_GL286459 29023 98 + 372756 GAAGTATAGTTATGAAGC-----------------AGGAGG-----TGAGGGAGAGGGGGCC-GGCAGGAACGT-GGGGTCCAGAGAGACTG---T--TTTTAAATA-------TGGT-TGCCTCAAGCCTGCTG i calJac3.chrUn_GL286459 I 6 C 0 s saiBol1.JH378156 16266500 98 + 16356641 GAAGTATAGTTACGAAGC-----------------GGGAGG-----TGAGGGAGAGGGGTCC-GGCAGGAACGT-GGGGTCCAGAGAGACTG---T--TTTTAAATA-------TGAA-TGCCTCAAGCCTGCTG i saiBol1.JH378156 I 6 C 0 s cebCap1.NW_016107870v1 1135577 100 + 1231380 GAAGTATAGTTACGAAGC-----------------AGGAGG-----TGAGGGAGAGGGGGCC-GGCAGGAACGT-GGGGTCCAGAGAGACTG---TGCTTTTAAATA-------TGGA-TGCCTCAAGCCTGTTG i cebCap1.NW_016107870v1 I 19 C 0 s aotNan1.NW_018500483v1 2665665 94 + 11732439 GAGGAGGAGTC----GGC-----------------AGGAGG-----TGAGGGAGAGGGGGCC-GGCAGGAACGT-GGGGTCCAGAGAGACTG---T--TTTTAAATA-------CGGA-TGCCTCAAGCCTGTTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22830302 129 + 22939663 GGCATGGATGTATCAGGCTTCCTCAGAGATGGTTGTGGAGGTATGCAAACAGAGTGGTAGCC--GCAGGACTGTGGGGGGCAAGAAAGACTGT--T--TTTTAAACAGCAGTCTTGAACTGCTTCAAGCTTGTTG i otoGar3.GL873542 I 7 C 0 s canFam3.chr24 47591789 95 + 47698779 GAAGCTTGGATATGCAGG-----------------GGGTGG-----AGATGGAATAGTAGCA-------GGTGT-GGAGTCCAGATGGGTTGTGTT--CTTTAAACA-------CGGA-GTCCTCAAGCTTGTTG i canFam3.chr24 I 34 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=161825.000000 s hg38.chr20_KI270870v1_alt 93753 15 + 183433 AAGAGTTGGGAA-------------------------GAG s panTro5.chr20 66420337 15 + 66533130 aaGAGTTGGGAA-------------------------GAG i panTro5.chr20 I 1907 C 0 s panPan2.chr20 62095434 15 + 62195757 AAGAGTTGGGAA-------------------------GAG i panPan2.chr20 C 0 I 632 s gorGor5.CYUI01015848v1 484269 15 - 578057 AAGAGTTGGGAA-------------------------GAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009369 15 - 110113093 AAGAGTTGGGAA-------------------------GAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735355 15 - 92844088 AAGAGTTGGAAA-------------------------GAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403356 15 + 96509753 AAGAGTTGGAAA-------------------------GAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874373 15 - 16982598 aagagttggaaa-------------------------gag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676011 15 - 3785965 AAGAGTTGGAAA-------------------------GAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 60836 15 - 179258 AAGAGTTGGAAA-------------------------GAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546350 15 - 5823884 AAGAGTTGGAAA-------------------------GAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29121 15 + 372756 AAGAGTTGGAAA-------------------------GAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16266598 15 + 16356641 AAGAGTTGGAAA-------------------------GAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1135677 15 + 1231380 AAGAGTTGGAAA-------------------------GAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2665759 15 + 11732439 AAGAGTTGAAAA-------------------------GAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22830431 15 + 22939663 AAGAGTTGAAAA-------------------------GAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47591884 40 + 47698779 AAGAGTTGAAAAGCCCCAGGAAGGTTCAGTGTAGAAGGAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=4300.000000 s hg38.chr20_KI270870v1_alt 93768 1 + 183433 T s panTro5.chr20 66420352 1 + 66533130 T i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484284 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009384 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735370 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403371 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874388 1 - 16982598 t i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676026 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 60851 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546365 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29136 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16266613 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1135692 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2665774 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22830446 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47591924 1 + 47698779 T i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I e panPan2.chr20 62095449 632 + 62195757 I a score=497535.000000 s hg38.chr20_KI270870v1_alt 93769 55 + 183433 AGTTCAATATTCCAGAAGAATGGAGGGAAGAGTTGATATTCCTGGGAAC-TTTCA-T s panTro5.chr20 66420353 55 + 66533130 AGTTCAATATTCCAGAAGAATGGAGGGAAGAGTTGATATTCCTGGGAAC-TTTCA-T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096081 55 + 62195757 AGTTCAATATTCCAGAAGAATGGAGGGAAGAGTTGATATTCCTGGGAAC-TTTCA-T i panPan2.chr20 I 632 C 0 s gorGor5.CYUI01015848v1 484285 55 - 578057 AGTTCAATATTCCAGAAGAATGGAGGGAAGAGTTGATATTCCTGGGAAC-TTTAA-T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009385 55 - 110113093 AGTTCAATATTCCAGAAGAATGGAGGGAAGAGTTGATATTCCCGGGAAC-TTTAA-T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735371 55 - 92844088 GTTTCAGTATTCCAGAAGAATGGAGGGAAGAGTTGATCTTCCTGGGAAC-TTTAA-C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403372 55 + 96509753 GTTTCAGTATTCCAGAAGAATGGAGGGAAGAGTTGATCTTCCTGGGAAC-TTTAA-C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874389 55 - 16982598 gtttcagtattccagaagaatggagggaagagttgatCTTCCTGGGAAC-TTTAA-C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676027 55 - 3785965 GTTTCAGTATTCCAGAAGAATGGAGGGAAGAGTTGATCTTCCTGGGAAC-TTTAA-T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 60852 55 - 179258 GTTTCAGTATTCCAGAAGAATGGAGGGAAGAGTTGATCTTCCTGGGAAC-TTTAA-T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546366 55 - 5823884 GTTTCAGTATTCCTGAGGAATGGAGGGAAGAGCTGATCTTCCTGGGAAC-TTTAA-T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29137 55 + 372756 AGTTAAATATTCCAGAAGAAAGGAGGGAAGAGTTGATACTCCTGGGAAC-TTTAA-C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16266614 55 + 16356641 AGTTAAATATTCCAGAAGAATGGAGGGAAGAGCTGATACTCCTGGGAAC-TTTAA-C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1135693 55 + 1231380 AGTTAAATATTCCAGAATAACGGAGGGAAGAGTTGATACTCCTGGGAAC-TTTAA-C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2665775 55 + 11732439 AGTTAAATATTCCAGAAGAATGGAGGGAAGAGTTGATACTCCTGGGAAC-TTTAA-C i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22830447 53 + 22939663 GGTTAAATATTTCAGAGGA---TGTGGTAATGTTGGGACTCCTGGTACC-TTTCATT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47591925 49 + 47698779 GATCAAATATTCTAGAAGAAT-------ATGGTTGATACTCTAGGTGCCTTTTAA-T i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I e dasNov3.JH569290 226514 4052 - 397369 I a score=2065395.000000 s hg38.chr20_KI270870v1_alt 93824 248 + 183433 TGACAGTGGGAAGGAGGTGGGTATAAAGTCCAGATGGACAAGCTGGCTCAGCAGGGAGGCAAGACCCCATCTCCTGTGCT-------------GGAGACGGAGGAGGGCTGA----------------------------------------------GGGGGT---------------------------GCATGGGAGAATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGTGACTACCCTTCCCCTCTTTG----CTG----AGGGGCAGGTGG---TAACAGCTCCTG-----GCCCCAAAGGCAGCCC-TAGTTACCAGAGATGCAAAACCTAGTGAAGACT--GAAAACATGTGG s panTro5.chr20 66420408 248 + 66533130 TGACAGTGGGAAGGAGGTGGGTATAAAGTCCAGATGGACAAGCTGGCTCAGCAGGGAGGCAAGACCCCATCTCCTGTGCT-------------GGAGACGGAGGAGGGCTGA----------------------------------------------GGGGGT---------------------------GCATGGGAGAATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGTGACTACCCTTCCCCTCTTTG----CTG----AGGGGCAGGTGG---TAACAGCTCCTG-----GCCCCAAAGGCAGCCA-TAGTTACCAGAGATGCAAAACCTAGTGAAGACT--GAAAACATTTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096136 248 + 62195757 TGACAGTGGGAAGGAGGTGGGTATAAAGTCCAGATGGACAAGCTGGCTCAGCAGGGAGGCAAGACCCCATCTCCTGTGCT-------------GGAGACGGAGGAGGGCTGA----------------------------------------------GGGGGT---------------------------GCATGGGAGAATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGTGACTACCCTTCCCCTCTTTG----CTG----AGGGGCAGGTGG---TAACAGCTTCTG-----GCCCCAAAGGCAGCCA-TAGTTACCAGAGATGCAAAACCTAGTGAAGACT--GAAAACATTTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484340 246 - 578057 TGACAGTGGGAAGGAGGTGGGTATAAAGTCCAGATGGACAAGCTGGCTCAGCAGGGAGGCAAGA-CCCATCTCCTGTGCT-------------GGAGACAGAGGAGGGCTGA-----------------------------------------------GGGGT---------------------------GCATGGGAGAATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGTGACTACCCTTCCCCTCTTTG----CTG----AGGGGCAGGTGG---TAACAGCTCCTG-----GCCCCAAAGGCAGCCC-TAGTTACCAGAGATGCAAAACCTAGTGAAGACT--GAAAACATTTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009440 244 - 110113093 TGACAGTGGGAAGGAGGTGGGTATAAAGTCCAGATGGACAAGCCGGCTCAGCAGGGAGGCAAGACTCCATCTCCTGTGCT-------------GGAGAC---GGAGGGCTGG----------------------------------------------GGGGGT---------------------------GCATGGGAGAATGG------------------------------------AGGTA-------------------------CGGGCTCCTCTCAAGTGACTACCCTTCCACTCTTTG----CTG----AGGGGCAGGTGG---TAACAGCTCCTG-----GCCCCAAAGGCAGCCC-TAGTTACCAGGGATGCAAAACCT-GTGAAGACT--GAAAACATTTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735426 244 - 92844088 TGACAGTGGGAAGGAGGTGGA-ATAAAGTCCAGAGGGACAAGCCGGCTCAGCAGAGAGGCAAGACCCCACCTCCTTTGCT-------------GGAGCTGGAGGAGGGCTGA-----------------------------------------------GGGGT---------------------------GCATGGGAGGATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGCGACTACCCTTCGCCTCCTTGCATACTG----AGGGGCGGGCAG---TAA-AGCTCCTG-----GCCCCAA----AGCCC-GAGTCACCGGAGACGCAAAACCGAGTGAAGACC---AAAACATTTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403427 244 + 96509753 TGACAGTGGGAAGGAGGTGGA-ATAAAGTCCAGAGGGACAAGCCGGCTCAGCAGAGAGGCAAGACCCCACCTCCTTTGCT-------------GGAGCTGGAGGAGGGCTGA-----------------------------------------------GGGGT---------------------------GCATGGGAGGATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGCCACTACCCTTCGCCTCCTTGCATACTG----AGGGGCGGGCAG---TAA-AGCTCCTG-----GCCCCAA----AGCCC-GAGTCACCGGAGACGCAAAACCGAGTGAAGACC---AAAACATTTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874444 248 - 16982598 TGACAGTGGGAAGGAGGTGGA-ATAAAGTCCAGAGGGACAAGCCGGCTCAGCAGAGAGGCAAGACCCCACCTCCTTTGCT-------------GGAGCTGGAGGAGGGCTGA-----------------------------------------------GGGGT---------------------------GCATGGGAGGATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGCGACTACCCTTCGCCTCCTTGCATACTG----AGGGGCGGGCGG---TAA-AGCTCCTG-----GCCCCAAAGGCAGCCC-GAGTCACCGGAGATGCAAAACCGAGTGAAGACC---AAAACATTTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676082 249 - 3785965 TGACAGTGGGAAGGAGGTGGA-ATAAAGTCCAGAGGGACAAGCCGGCTCAGCAGAGAGGCAAGACCCCACCTCCTTTGCT-------------GGAGCTGGAGGAGGGCTGA-----------------------------------------------GGGGT---------------------------GCATGGGAGAATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGCGACTACCCTTCGCCTCCTTGCATACTG----AGGGGCGGGCAG---TAACAGCTCCTG-----GCCCCAAAGGCAGCCC-GAGTCACCGGAGATGCAAAACCGAGTGAAGACC---AAAACATTTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 60907 254 - 179258 TGACAGTGGGAAGGAGGTGGA-ATAAAGTCCAGAGGGACAAGCTGGCTCAGCAGAGAGGCAAGACCCCACCTCCTTTGCT-------------GGAGCTGGAGGAGGGCTGA-----------------------------------------------GGGGT---------------------------GCATGGGAGAATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGCGACTACCCTTCGCCTCCTTGCATACTG----AGGGGCCGGCAG---TAACAGCTCCTGTAACAGCCCCAAAGGCAGCCC-GAGTCACCGGAGATGCAAAACCGAGTGAAGACC---AAAACATTTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546421 250 - 5823884 TGACAGTGAGAAGGAGGTAGA-ATAAAGTCCAGAGGGACAAGCCGGCCCAGCAGAGAGGCAAGACCCCACCTCCTTTGCC-------------GGAGCTGGAGGAGGGCTGA----------------------------------------------GGGGGT---------------------------GCATGGGAGAATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCAAGCGACTACCATTCCCCTCTTTGCATACTG----AGGGGCAGGCAG---TAACAGCTCCTG-----GCCCCAAAGGCAGCTC-TAGTCACCAGAGATGCAAAACCTAGTGAAGACT---GAAACATTTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29192 234 + 372756 CGACAGTGGGAAGAAGGTAGGTATAAA-TCCAGATGGAGAGGCCTGCTCAGCAGGGAGGCAAGATCCCACCTCCTATGCT-------------GGAGACACAGGAGGGCTGA----------------------------------------------GAGGGT---------------------------ACACGGGAGAATGG------------------------------------AGATG-------------------------TGGGCTCCTCTCGAGAGACTCCATTTCCCCTC--TGCATGCTG----AGGAGCAGGTGG---TAACAGCTCCTG-----GCCCCAAAGGCAGCCC-TAGTCA---------------CCAGTGAAGACT--GAAAACGTTTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16266669 251 + 16356641 TGACAGTGGGAAGGAGGTGGGTATGAA-TCCAGATGGAGAGGCCTGCTCAGCAGGGAGGCAAGACCCCACCTCCTATGCT-------------GGAGACAGAGGAGGGCTGA----------------------------------------------GGGGGT---------------------------GCATGGGAGAATGG------------------------------------AGATG-------------------------TGGGCTCCTCTCGAGAGACTCCACTTCCCCTCTTTGCATGCTG----AGGGGCAGGTGG---TAACAGCTCCTG-----GCCCCAAAGGCAGCAG-TAGTCACCAGCGATACAAAACCCAGTGAAGACT--GAAAACGTTTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1135748 248 + 1231380 TGACAGTGGGAAGGAGGTGGGTACAAA-TCCAGATGGAGAGGCCTGCTCAGCAGGGAGGCAAGACCCCACCTCCTATGCT-------------GGAGACAGAGGAGGGCCGA----------------------------------------------G-GGGT---------------------------TCATGGGAGAATGG------------------------------------AGGTG-------------------------TGGGCTCCTCTCGAGAGACTCCGCTTCCCCTCTTTGCATGCTG----AGGGACAGGTGG---TAACAGCTCCTG-----GCCCCAAAGGC--CCC-TAGTCATCAGCAATACGGAACCCAGTGAGGACT--GAAAATGTTTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2665830 242 + 11732439 TGACAGTGGGAAGGAGGTGGCTATACA-TCCAGATGGAGAGGCCTGCTCAGCAGGGAGGCAGGACCCCACCTCCTATGCT-------------GGAGACAGAGGAGGGCTGA----------------------------------------------GGGAGT---------------------------GCATGGGAGAATGG------------------------------------AGATG-------------------------TGGGCTCCTCTCGAGAGACTCCACTTCCCCTCTTTGCGTGCTG----AGGGGCAGGTGG---TAACAGCTCCTG-----GTCCCAAAGGCAGCCC-TAGTCACCAGCGATACAAACCCCAGTGAAGACT--GA---------G i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22830500 249 + 22939663 TGGTAGTGGGAGGAGGGCTC--ATAAAATCCATGTGCA--------------AGGTTAGCGTGACTCCATCTCCCCATGT-------------GGGGATGGAGGAGGGCTGA-----------------------------------------------GGGTTGAGGCCTGAGTCCCAGATATGGCTTCGGTGTGGGAAAGCTG------------------------------------AGGTG-------------------------TAGGCTCTCCT--GGTGCCACCTCTTCCCCTCTTTGCATGCTG-----GGGGCAGAAGG---GAGCAGCCTCTG-----GG-CCAGAGGCCTCAG-TGGTCACCAGAGCCACGACACCT-GTGGAGACA----------CTGG i otoGar3.GL873542 C 0 I 5 s canFam3.chr24 47591974 317 + 47698779 CAGTAGTGGGAAGAGGGAGAT-ACCAAGCCCAGATGGAGAAGTCAGCTCAGCTGGGATGCAAGATCTC-CCTCCCTTATT-------------GGGGACAGAACAGGGACAG----------------------------------------------AGGACG---------------------------GCTGGGGCTGATGGGCTGACATTTCCTACCAAGTGATGAGAACCTCTGACAGGTGTGTGTCGGTGCGGGGCAGCCCACTTTGGGCTCTCTCTGCGTGAAGACCATTTCTC-CTTTGCATGCTGGGCGAGGGGCAGGAGG---TAACTGCCTCTG-----GCTCCAAAGGCAGCCCATGGTCACCAGAGACACAAAACCTAGTGAAGACTCTGAGAACATTTTG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 230566 307 - 397369 TGCCAGAAGGAAGGAGCGGGT-GCCCAGCCCAGGTGGAGAGGACGGCTCCTCCATGA-GCAAGGCCCT-TCTCCCCTGATCGGGGAGTGATGAGAGGACAGAAGAGGGGAGGACACCTCCCTGTCTCACAGAAATGCAGGGAGATCCCCCATGAGTGTGGGGGG---------------------------GCACAAGAAAGCTG------------------------------------AGAGG-------------------------TGCCCCCTCCCACGATGAC----CTCCGCCCTTACACATGCTG-----GGGGTGGATGGCTATAACAGCTCTTG-----ACCCTAGGGCCAGCCG-TGGTCCCCAGAGACGCAAACTCCAG-GGTGACTCTGGAGGCTTTTGA i dasNov3.JH569290 I 4052 C 0 e proCoq1.NW_012150197v1 1840052 3411 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56847111 2768 + 57149010 I a score=804739.000000 s hg38.chr20_KI270870v1_alt 94072 72 + 183433 CTTTCCACACTTACCACCTGGCCTCTCACTCAGTCTTCCTGTTATTTTGTTCTTGTTTTCAGAGTGGGGAGG s panTro5.chr20 66420656 72 + 66533130 CTTTCCACACTTACCACCTGGCCTCTCACTCAGCCTTCCTGTTATTTTGTTCTTGTTTTCAGAGTGGGGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096384 72 + 62195757 CTTTCCACACTTACCACCTGGCCTCTCACTCAGCCTTCCTGTTATTTTGTTCTTGTTTTCAGAGTGGGGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484586 72 - 578057 CTTTCCACACTTACCACCTGGCCTCTCACTCAGCCTTCCTGTTATTTTGTTCTTGTTTTCAGAGTGGGGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009684 72 - 110113093 CTTTCCACACTTACCACCTGGCCTGTCACTCAGCCTTCCTGTTATTTTGTTCTTGTTTTCAGAGTGGGGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735670 72 - 92844088 CTTTCCACACTTACCACCTGGCCTCTCCCTCGGCCTGCCTGTTGTTTTGTTCTTGTTTTCAGAGTGCGGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403671 71 + 96509753 C-TCCCACACTTACCACCTGGCCTCTCCCTCGTCCTGCCTGTTGTTTTGTTCTTGTTTTCAGAGTGCGGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874692 72 - 16982598 CTTTCCACACTTACCACCTGGCCTCTCCCTCGGCCTGCCTGTTGTTTTGTTCTTGTTTTCAGAGTGCGGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676331 72 - 3785965 CTTTCCACACTTACCACCTGGCCTCTCACTCAGGCTTCCTGTTGTTTTGTTCTTGTTTTCAGAGTGCGGAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61161 72 - 179258 CTTTCCACACTTACCACCTGGCCTCTCACTCATGCTTCCTGTTGTTTTGTTCTTGTTTTCAGAGTGCGGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546671 72 - 5823884 CTTTCCACACTTACCACCTGGCCTCTCACTCAGCCTTCCTGTTATTTTGTTCTTGTTTTCAGAGTGGGGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29426 72 + 372756 CTTTCCATGCTCACCACCTGGCCTCTCACTCAGCTTTCCTGTGGTTTTGTTCTTGTTTTCAGAGTAGGGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16266920 72 + 16356641 CTTTCTGTGCTCACCACCTGGCCTCTCACTCAGCTTTCCTGTTATTTTGTTCTTGTTTTCAGACTGCGGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1135996 41 + 1231380 CTTTCCGTGCTCACCACCTGGCCTCTTACTCAGC-------------------------------GGGGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666072 72 + 11732439 CTTTCCGTGCTCACCACCTGGCCTCTCACTCAGCTTTCCTGTTATTTTGTTCTTGTTTTCAGAGTGGGGAGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56849879 71 + 57149010 CTTTCCACACTCAACACTCGGCCTCTCGCTCAGCCTTCCTGTTA-TTTGTTCTTATTTTGGGGGTGAGGAGG i micMur3.chr18 I 2768 C 0 s proCoq1.NW_012150197v1 1843463 70 - 2029793 CTTTCCACCCTTAGCACGTGGCCTCTCGCTCAGCCTTCCTGTTG-TTGGTTCTTGTTTT-GGGGTGGGGAGG i proCoq1.NW_012150197v1 I 3411 C 0 s otoGar3.GL873542 22830754 67 + 22939663 CGCTCCACACTCACCACTAGGTC-CTCACTTAGCCTTCCTAGCA-TTTGTTT---TTTTAGGGGTAGGGAGG i otoGar3.GL873542 I 5 C 0 s canFam3.chr24 47592292 70 + 47698779 CCTTTTGCCATCACCACCTGACCCCTTGCTCAGGCTTCTTGTCATCTTATTGTTG--GGAGGGGGAGGGAGG i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 230873 69 - 397369 CTCCCCATGCTCCCCACCTGGGCTCT--CTGAGCCTCCCTGTCA-TCTGCTTTTGACTTGGGGAGGGGGAGG i dasNov3.JH569290 C 0 I 408 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I a score=140461.000000 s hg38.chr20_KI270870v1_alt 94144 19 + 183433 TTTTACACAGTGGAAGGGG s panTro5.chr20 66420728 19 + 66533130 TTTTACACAGTGGAAGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096456 19 + 62195757 TTTTACACAGTGGAAGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484658 19 - 578057 TTTTACACAGTGGAAGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009756 19 - 110113093 TTTTGCACAGTGGAAGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735742 19 - 92844088 CTTCGCACAGTGGAAGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403742 19 + 96509753 CTTCGCACAGTGGAAGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874764 19 - 16982598 CTTTGCACAGTGGAAGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676403 19 - 3785965 TTTTGCGCAGTGGAAGGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61233 19 - 179258 TTTTGCGCAGTGGAAGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546743 19 - 5823884 TTTTGCACAGTGGAAGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29498 19 + 372756 TTGTGCACAGTGGAAGGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16266992 19 + 16356641 TTGTGCGCCGTGGAAGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136037 7 + 1231380 TTGTGCA------------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666144 1 + 11732439 T------------------ i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56849950 19 + 57149010 CTTTGCCCAGTGGAAGGGG i micMur3.chr18 C 0 I 355 s proCoq1.NW_012150197v1 1843533 19 - 2029793 CTTCGCACAGTGGAAGGGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22830821 15 + 22939663 TTTT-CACAGTAGAAG--- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47592362 18 + 47698779 TTTCGAACTGAGGAAGGT- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e dasNov3.JH569290 230942 408 - 397369 I a score=140428.000000 s hg38.chr20_KI270870v1_alt 94163 15 + 183433 GTCAGGTTGCCAGGG s panTro5.chr20 66420747 15 + 66533130 GTCAGGTTGCCAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096475 15 + 62195757 GTCAGGTTGCCAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484677 15 - 578057 GTCAGGTTGCCAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009775 15 - 110113093 GTCGGGTTGCCAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735761 15 - 92844088 GTCGGGTTGCCAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403761 15 + 96509753 GTCGGGTTGCCAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874783 15 - 16982598 GTCGGGTTGCCAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676422 15 - 3785965 GTCGGGTTGCCAGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61252 15 - 179258 GTCGGGTTGCCAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546762 15 - 5823884 GTCGGGTTGCCAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29517 15 + 372756 GTCGGGTTGCCAGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267011 15 + 16356641 GTCGAGTTGCCAGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136044 5 + 1231380 ----------CGGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666145 13 + 11732439 --CGGGTTGCCAGTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1843552 15 - 2029793 GTTGGGCTGCCAGGG i proCoq1.NW_012150197v1 C 0 I 318 s canFam3.chr24 47592380 15 + 47698779 GTTGGACTGTCAGTG i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56849969 355 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e otoGar3.GL873542 22830836 0 + 22939663 C a score=322175.000000 s hg38.chr20_KI270870v1_alt 94178 54 + 183433 CTGGAGTGGATCAGAGCTAACTGCCACAGGGACTCCCATCCGGAGGCCCAGGGG s panTro5.chr20 66420762 54 + 66533130 CTGGAGTGGATCAGAGCTAACTGCCACGGGGACTCCCATCCGGAGGCCCAGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096490 54 + 62195757 CTGGAGTGGATCAGAGCTAACTGCCACAGGGACTCCCATCCGGAGGCCCAGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484692 54 - 578057 CTGGAGTGGATCAGAGCTAACTGCCACAGGGACTCCCATCCGGAGGCCCAGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009790 54 - 110113093 CTGGAGAGGATCAGAGCTAACCGCCACAGGGACTCCCACCCGGAGGTCCAGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735776 54 - 92844088 CTGGAGTGGATCAGAGCTAACCGCCACAGGGATTCCCACCCAGAGGCCCAGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403776 53 + 96509753 CTGGAGTGGATCAGAGCTAACCGCCACAGGGATTCCCACCCAGAGGCCCA-GGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874798 54 - 16982598 CTGGAGTGGATCAGAGCTAACCGCCACAGGGATTCCCACCCAGAGGCCCAGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676437 54 - 3785965 CTGGAGTGGATCAGAGCTAACGGCCACAGGGATTCCCACCCAGAGGCCCAGGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61267 54 - 179258 CTGGAGTGGATCAGAGCTAACCGCCACAGGGATTCCCACCCAGAGGCCCGGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546777 32 - 5823884 CTGGAGTGGATCAGAGCTAACCACCACAG----------------------GGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29532 29 + 372756 CTAGAGTGGTTCAGAGCTAAACACCACAG------------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267026 39 + 16356641 CTAGAGTGGGTCAGAGCTAAACACCACAG---------------GGCCCAGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136049 39 + 1231380 CTAGAGTGGGTCAGAGCTAAACACCACAG---------------GGCCCAGGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666158 39 + 11732439 CTAGAGTGGGTCAGAGCTGAACACCACAG---------------GGCCCAGGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22830836 40 + 22939663 ----------CCAGAACTGACCACCACAGGGATGCCCTGTTTGAGG----GGTA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47592395 26 + 47698779 -----CTGAGGCAGGGCT-----------------------GGAGGGACAGTGG i canFam3.chr24 C 0 I 51 e proCoq1.NW_012150197v1 1843567 318 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56849969 355 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=704530.000000 s hg38.chr20_KI270870v1_alt 94232 86 + 183433 ATGCACCATGGGGGCAGGTGGGCTCAGGCCAGATTCCAGGCTACCGAGCCAGCATGAAAACAGCCACGGTCGCCCGC-AGGGGGTCC s panTro5.chr20 66420816 86 + 66533130 ATGCACCATGGGGGCAGGTGGGCTCAGGCCAGATTCCAGGCTACCCAGCCAGCATGAAAACAGCCACGGTCACCCGC-AGGGGGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096544 86 + 62195757 ATGCACCATGGGGGCAGGTGGGCTCAGGCCAGATTCCAGGCTACCCAGCCAGCATGAAAACAGCCACGGTCGCCCGC-AGGGGGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484746 86 - 578057 ATGCACCATGGGGGCAGGTGGGCTCAGGCCAGATTCCAGGCTACCCAGCCAGCATGAAAACAGCCACGGTCGCCCGC-AGGGGGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009844 87 - 110113093 ATGCACCATGGGGGCAGGTGGGCTCAGGCCAGATTCCAGGCCACCCAGCCAGCATGAAAGCAGCCACGGTCGCCCGTGGGGGGGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735830 84 - 92844088 ATACACCATGGAGGCA-GTGGGTTCAGGCCAGATTCCAGGCCACCCAGCCAGCATGAAAG-AACCATGGTCACCCGT-GTGGGGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403829 84 + 96509753 ATACACCATGGAGGCA-GTGGGTTCAGGCCAGATTCCAGGCCACCCAGCCAGCATGAAAG-AACCATGGTCACCCGT-GTGGGGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874852 84 - 16982598 ATACACCATGGAGGCA-GTGGGTTCAGGCCAGATTCCAGGCCACCCAGCCAGCATGAAAG-AACCATGGTCACCCGT-GTGGGGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676491 85 - 3785965 ATACACCATGGGGGCA-GTGGGTTCAGGCCAGATTCCAGGCCACCCGGCCAGCATGAAAGCAACCATGGTCACCCGT-GTGGGGTCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61321 85 - 179258 ATGCACCATGGGGGCA-GTGGGTTCAGGCCAGATTCCAGGCCACCCAGCCAGCATGAAAGCAACCATGGTCACCCGT-GTGGGGTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546809 85 - 5823884 ATACACCATGGGGGCA-GTGGGTTCAGGCCAGATTCCAGGCCACCCAGCCAGCATGAAAGCAGCCATGGTCACCCGT-GTGGGGTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29561 85 + 372756 -GACACCATGAGGGCAGGTTGGTTCAGGCCAGATTCCAGGCCACCCAGCCAGCACGAAAGCAGCCATGGTCACCTGT-GTGAGGTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267065 86 + 16356641 AGGCACCGTGGGGGCAGGTTGGCGCAGGCCAGATTCTAAGCCACCCAGCCAGCATGAAAGCAGCCATGGTCACTGGG-GTGGGGACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136088 85 + 1231380 -GGCACCAGAGGGGCAGGTTGGCTCAGGCCAGATGCCAGGCCACCCAGCCAGCACGAAAGCAGCCATGGTCACCTGT-GTGGGGTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666197 86 + 11732439 AGGCACCATGGGGGCAGGTTGGCTCAGGCCAGATTCCCGGCCACCCAGCCAGCATGACAGCAACCATGGTCACCTGT-GTGGGGTCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22830876 81 + 22939663 TCATACCATCAGGGTAGGTTGCCTCAGGCCAA--TTCGAGCAACCCAGGAGGCATCATGGCAGATGTAGCCTCA----GTGGGGTCC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1843567 318 - 2029793 I e canFam3.chr24 47592421 51 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56849969 355 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=810058.000000 s hg38.chr20_KI270870v1_alt 94318 133 + 183433 CCCATGGGGTTGTGCGTGGAG--TGGCCACAGTGCCAGTGCAAGGAGGAAG---TGTGTGCTGGCAGTGGGTCAGCCGGCAGCTGGGGTGTTAGCTCTGGGACAAGGGGGCTCTCCTTGCCATGACGACAGAAGGAAA s panTro5.chr20 66420902 133 + 66533130 CCCATGGGGTTGTGCGTGGAG--TGGCCACAGTGCCAGTGCAAGGAGGAAG---TGTGTGCTGGCAGTGGGTCAGCCGGCAGCTGGGGTGTCAGCTCTGGGACAAGGGGGCTCTCCTTGCCACGATGACAGAAGGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096630 133 + 62195757 CACATGGGGTTGTGCGTGGAG--TGGCCACAGTGCCAGTGCAAGGAGGAAG---TGTGTGCTGGCAGTGGGTCAGCCGGCAGCTGGGGTGTCAGCTCTGGGACAAGGGGGCTCTCCTTGCCACGATGACAGAAGGAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484832 133 - 578057 CCCATGGGGTTGTGCGTGGAG--TGGCCACAGTGCCAGTGCAAGGAGGAAG---TGTGTGCTGGCAGTGGGTCAGCCGGCAGCTGGGGTGTTAGCTCTGGGACAAGGGGGCTCTCCTTGCCATGATGACAGAAGGAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110009931 133 - 110113093 CCCATGGGGTTGTGCGTGGAG--TGGCCACAGTGCCAGTGCAAGGAGGAAG---TGTGTGCTGGCAGTGGGTCAGCCGGCAGCTGGGGTGTTAGCTCTGGGACAAGGGGGCTCTCCTTGCCATGACGACAGAAGGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92735914 113 - 92844088 CCCGTGGGGCTGTGC----------------------GTGCCAGGAGGAAG---TGTGTGCTGGCAGTGGGTCAGCGGGCAGCTGGGGTGTTAGCTCTGGGACAAGGGGGCTCTCCTTGCCATGACGACAGGAGGAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96403913 113 + 96509753 CCCGTGGGGCTGTGC----------------------GTGCCAGGAGGAAG---TGTGTGCTGGCAGTGGGTCCGCGGGCAGCTGGGGTGTTAGCTCTGGGACAAGGGGGCTCTCCTTGCCATGATGACAGGAGGAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16874936 113 - 16982598 CCCGTGGGGCTGTGC----------------------GTGCCAGGAGGAAG---TGTGTGCTGGCAGTGGGTCAGCGGGCAGCTGGGGTGTTAGCTCTGGGACAAGGGGGCTCTCCTTGCCATGACGACAGGAGGAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676576 113 - 3785965 CCCGTGGGGTTGTGC----------------------GTGCCAGGAGGAAG---TGTGTGCTGGCAGTGGGTCAGCGGGCAGCTGGGGTGTTAGCTCTGGGACAAGGGGGCTCTCCTTGCCATGACGACAGGAGGAAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61406 113 - 179258 CCCGTGGGGTTGTGC----------------------GTGCCAGGAGGAAG---TGTGTGCTGGCAGTGGGTCAGCGGGCAGCTGGGGTGTTAGCTCTGGGACAAGGGGGCTCTCCTTGCCGTGACGACAGGAGGAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5546894 113 - 5823884 CCCATGGGGTTGTGC----------------------GTGCCAGGAGGTAG---TGTGTGCTGGCAGTGGGTCAGCAGGCAGCTGGGGTGTTAGCTCTGGGACAAGGGGGCTCTCCTTGCCATGACCACAGGAGGAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29646 105 + 372756 CTCATGGGGTTGTGAGTGGAG--TGGCCCCAGTGCCAGTGCAAGGAGGAAG---TGTGTGATGGCAAAGTGTCAGTGGGT----------------------------GGCTCTCCTTGCCATGACGACAGAAGGAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267151 105 + 16356641 CCCACGGGGTTGTGAGTGGAG--TGGCCCCAGTGCCAGTGCAAGGAGGAAG---TGTGTGCTGGCAAAGTGTCAGCGGGT----------------------------GGCTCTCCTTGCCATGATGACAGAAGGAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136173 104 + 1231380 CCCATGGGGTTGTGAGTGGAG--CGGCCCCGGTGCCAGTGCAAGGAGGAAG---TGTGTGCT-GCGAAGTGTCAGCGGGT----------------------------GGCTCTCCTTGCCATGACGGCAGAAGGAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666283 102 + 11732439 CCCATGCGGTTGTGAGTGGAG--CGGCCCCAGTGCCAGTGCAAGGaggaag---tgt-tgctggc--agtgtcagtgggt----------------------------ggctctccttgctatgaCGACAGAAGGAGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22830957 93 + 22939663 TCCATGGGGCTGTGCATGGGGACCAGTCCTGGCACCAGTGTGAGGAGGAAG---TGGGTGCT-GCCGTGGGCCAG------GCTGAG-----------------------------------TGAGAGCAGAGGGCAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47592472 118 + 47698779 CCTGTGGCGTTGGACCT------GGGCATGAACACCAGTGTCTGGAAGGAGAAATGGATGTCACCTGTGGTCCAA---------GGGTTTCCAGATGGGGCACCTCGGGGTCCCCCCGGGCATG-----GGAAGGAGA i canFam3.chr24 I 51 I 27 e proCoq1.NW_012150197v1 1843567 318 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56849969 355 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=503847.000000 s hg38.chr20_KI270870v1_alt 94451 64 + 183433 CCTTGGGG--TAGGCCAG-----------CAGCACTTCCTGGGAAGAGCCCAGCAGAGCACTGGCTCTCAGTGGAAG s panTro5.chr20 66421035 64 + 66533130 CCTTGGGG--TAGGCCAG-----------CAGCACTTCCTGGGAAGAGCCCAGCAGAGCACTGGCTCTCAGTGGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096763 64 + 62195757 CCTTGGGG--TAGGCCAG-----------CAGCACTTCCTGGGAAGAGCCCAGCAGAGCACTGGCTCTCAGTGGAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 484965 64 - 578057 CCTTGGGG--TAGGCCAG-----------CAGCACTGCTTGGGAAGAGCCCAACAGAGCACTGGCTCTCAGTGGAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010064 64 - 110113093 CCTTGGGG--CAGGCCAG-----------CAGCACTGCCTGGGAAGAGCCCAACAGAGTACTGGCTGTCAGTGCAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736027 64 - 92844088 CCTTGGGG--TAGGCCAG-----------CAGCACTGCCTGGGAAGAACCCAACAGAGTACTGGCTTTCAGTGGAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404026 64 + 96509753 CCTTGGGG--TAGGCCAG-----------CAGCACTGCCTGGGAAGAACCCAACAGAGTACTGGCTTTCAGTGGAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875049 64 - 16982598 CCTTGGGG--TAGGCCAG-----------CAGCACTGCCTGGGAAGAACCCAACAGAGTACTGGCTTTCAGTGGAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676689 64 - 3785965 CCTTGGGG--TAGGCCAG-----------CAGCACTGCCTGGGAAGAACCCAAAAGAGTGCTGGCTTTCAGTGGAAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61519 64 - 179258 CCTTGGGG--TAGGCCAG-----------CAGCACTGCCTGGGAAGAACCCAACAGAGTACTGGCTTTCAGTGGAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547007 64 - 5823884 CCTTGGGG--TAGGCCAG-----------CAGCACTGCCTGGGAAGAACCCAACAGAGTATTGGCTCTCAGTGGAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29751 63 + 372756 CCTTGGGG--TAGGCCAG-----------CAGCACTCCCTGGGAAGAGCCCAGCAGAGTACTGGTTCTCGGTG-AAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267256 63 + 16356641 CCTTGGGG--TAGGCCAG-----------CAGCACTCCCTGGGAAGAGCCCAGCGGAGTACTGGCTCTCGGTG-AAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136277 63 + 1231380 CCTTGGGG--TAGGCCAG-----------CAGCACTCCTTGGGAAGAGCCCAGCAGAGTACTGGCTCTCGGTG-AAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666385 50 + 11732439 CCTTGGGG--TAGGCCCG-----------TAGCACTCCCTGGGAAGAGCCCAGTAG-------------GGTG-AAA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22831050 68 + 22939663 CCTGGAGGGCCTGGCCTGGGATCCAGCTCCAGGCCTGTGTGCTATGTTCCATGCAGAGT--TAACGTGCA------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1843567 318 - 2029793 I e canFam3.chr24 47592590 27 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56849969 355 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=55514.000000 s hg38.chr20_KI270870v1_alt 94515 11 + 183433 CGTCCTGTCTG s panTro5.chr20 66421099 11 + 66533130 CGTCCTGTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096827 11 + 62195757 CGTCCTGTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485029 11 - 578057 CGTCCTGTCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010128 11 - 110113093 CGTCCTGTCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736091 10 - 92844088 TGTCC-GTTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404090 10 + 96509753 TGTCC-GTTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875113 10 - 16982598 TGTCC-GTTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676753 10 - 3785965 TGTCC-GTTTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61583 10 - 179258 TGTCC-GTTTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547071 10 - 5823884 TGTCC-ATCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29814 11 + 372756 TGTCGTGTCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267319 11 + 16356641 TGTCGTGTCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136340 11 + 1231380 TGTCGTGCCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666435 11 + 11732439 TGTCATGTCTG i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47592617 11 + 47698779 TGCCTTCTCAG i canFam3.chr24 I 27 C 0 e proCoq1.NW_012150197v1 1843567 318 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56849969 355 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e otoGar3.GL873542 22831118 0 + 22939663 C a score=575631.000000 s hg38.chr20_KI270870v1_alt 94526 47 + 183433 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGCTGCTGAGTTGGA s panTro5.chr20 66421110 47 + 66533130 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGCTGCTGAGTTGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096838 47 + 62195757 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGCTGCTGAGTTGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485040 47 - 578057 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGCTGCTGAGTTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010139 47 - 110113093 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGATGCTGAGTTGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736101 47 - 92844088 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGATGCTGAGTTGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404100 47 + 96509753 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGATGCTGAGTTGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875123 47 - 16982598 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGATGCTGAGTTGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676763 47 - 3785965 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGATGCTGAGTTGGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61593 47 - 179258 GGGCCTGGGTCAGGCTGGTCTCCAGTTTGCAGTGATGCTGAGTTGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547081 47 - 5823884 GGGCCTGGGTCAGGCTGGTCTCTGGTTTGTAGTGATGCTGAGTTGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29825 47 + 372756 GGGCCTGGGTCAGACTGGTCTCCAGTTTGCGGTGCTGCTGAGTTGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267330 47 + 16356641 GGGCCTGGGTCAGGCTAGTCTCCAGTTCGCCGTTCTGCTGAGTTGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136351 47 + 1231380 GGGCCTGGGTCAGACTGGTCTCCAGTTCGTGGTGCTGCTGAGTTGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666446 47 + 11732439 GGGCCTGGGTCAGACTGGTCTCCAGTTCGTGGTGCTGCTGAGTTGGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56850324 47 + 57149010 GGGCCTGAGTCAGGCTGGTCTCAGGTTTGCAGGGCTGCTGGGCTGGA i micMur3.chr18 I 355 I 683 s proCoq1.NW_012150197v1 1843885 47 - 2029793 GGGCCTGGGTCAGGCTGGGCTCAGGTTTGCAGCACTGCCGGGCTGGA i proCoq1.NW_012150197v1 I 318 C 0 s otoGar3.GL873542 22831118 40 + 22939663 GGGCCTGGCTCAGATT-GTCTTGGGTTTACAGCACTGCTGC------ i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47592628 44 + 47698779 GGGCCTGGCT-GGGCTGGCTGCAGGTCTGCAGGGTT-CTGGGTTGG- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e dasNov3.JH569290 230942 408 - 397369 I a score=214330.000000 s hg38.chr20_KI270870v1_alt 94573 20 + 183433 AAAAGAGGGCTT---CATTAGGA s panTro5.chr20 66421157 20 + 66533130 AAAAGAGGGCTT---CATTAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096885 20 + 62195757 AAAAGAGGGCTT---CATTAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485087 20 - 578057 AAAAGAGGGCTT---CGTTAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010186 20 - 110113093 AAAAGAGGGCTT---CATTAGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736148 20 - 92844088 AAAAGAGGGCTT---CGTTAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404147 20 + 96509753 AAAAGAGGGCTT---CGTTAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875170 20 - 16982598 AAAAGAGGGCTT---CGTTAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676810 20 - 3785965 AAAAGAGGGCTT---CGTTAGGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61640 20 - 179258 AAAAGAGGGCTT---CGTTAGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547128 20 - 5823884 AAAAGAGGGCTT---CGTTAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29872 20 + 372756 AAAAGAGGGCTT---CGTTAGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267377 20 + 16356641 AAAAGAGGGCTT---CGTTAGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136398 20 + 1231380 AAAAGAGGGCTT---CGTTAGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666493 20 + 11732439 AAAAGAGGGCTT---CGTTAGGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1843932 20 - 2029793 GACAGCGGGCTT---CATCAGGA i proCoq1.NW_012150197v1 C 0 I 977 s otoGar3.GL873542 22831158 11 + 22939663 ---------CTT---TTTTAGGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47592672 20 + 47698779 ---GGTGGGTGTTGGCATTAGGA i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=2278094.000000 s hg38.chr20_KI270870v1_alt 94593 267 + 183433 GAAG-ACAGACGGGGGGCTACAGCTCAGCACTGCACATCTCCCTGGCCTGTGTTGGAGTCTCTGG--CCAGTGAGGGGTGGT---------TCCCT---------CTCCTCT----GGACCTTTGTGCATCAATCTCAGCTGAGGAGGCCCTGTTTG-TT-TCCTGAGTTTTTCTGCCCACAAGAGCCCCATAAAAGTGAGTGTGGGGCCACCATGGGGACAGATGTGGGGGTTACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGCCGGGTCCCTAGAGAGGGGTCCCAGC s panTro5.chr20 66421177 267 + 66533130 GAAG-ACAGACGGGGGGCTACAGCTCAGCCCTGCACATCCCCCTGGCCTGTGTTGGAGTCTCTGG--CCAGTGAGGGGTGGT---------TCCCT---------CTCCTCT----GGACCTTTGTGCATCAATCTCAGCTGAGCAGGCCCTGTTTG-TT-TCCTGAGTTTTTCTGCCCACAAGAGCCCCATAAAAGTGAGTCTGGGGCCACCGTGGGGACAGATGTGGGGGTTACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGCCGGGTCCCTAGAGAGGGGTCCCAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62096905 267 + 62195757 GAAG-ACAGACGGGGGGCTACAGCTCAGCCCTGCACATCCCCCTGGCCTGTGTTGGAGTCTCTGG--CCAGTGAGGGGTGGT---------TCCCT---------CTCCTCT----GGACCTTTGTGCATCAATCTCAGCTGAGCAGGCCCTGTTTG-TT-TCCTGAGTTTTTCTGCCCACAAGAGCCCCATAAAAGTGAGTCTGGGGCCACCGTGGGGACAGATGTGGGGGTTACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGCCGGGTCCCTAGAGAGGGGTCCCAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485107 266 - 578057 GAAG-ACAGAC-GGGGGCTACAGCTCAGCCCTGCACATCTCCCTGGCCTGTGTTGGAGTCTCTGG--CCAGTGAGGGGTGGT---------TCCCT---------CTCCTCT----GGACCTTTGTGCATCAATCTCAGCTGAGCAGGCCCTGTTTG-TT-TCCTGAGTTTTTCTGCCCACAAGAGCCCCATAAAAGTGAGTCTGGGGCCACCGTGGGGACAGATGTGGGGGTTACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGCTGGGTCCCTAGAGAGGGGTCCCAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010206 267 - 110113093 GAAG-ACAGACGAGAGGCTGCAGCTCAGCTCTGCACATCTCCCTGGCCTGTGCTGGAGTCTCTGG--CCAGTGAGGGGTGGT---------TCCCT---------CTCCTCT----GGAACTTTGTGCATCAATCTCAGCTGAGCAGGCCCTGTTTG-TT-TACTGAGTTTTTCTGCCCACCAGAGCCCCATAAAAGTGAGCCTGGGGCCACTGTGGGGACAGATGTGGGGGTGACCTTGAGCAGGCAGGACTCCAGGTACAAAGATGCCGGGTCCCTAGAGAAGGGTCCCAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736168 266 - 92844088 GAGGGACAGAC-AGGGGCTGCAGCTCAGCTCTGCACATCTCCCTGGCGTGTGTTGGAGTCTCCGG--CCAATGAGGGGCGGT---------TCCCT---------CTCCTCT----GGACCCATGTGCGTCGGTCTCAGCGGAGCAGGCCCCGTTTG-TT-TACTGGGTTTTTCTGCCCACCGGAGCTCCACACAAGTGAGTCTGGGGCCACTGTGGGGACAGATAT-GGGGTGACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGTCGGGTCCCCAGAGAGGGGTCCCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404167 266 + 96509753 GAGGGACAGAC-AGGGGCTGCAGCTCAGCTCTGCACATCTCCCTGGCGTGTGTTGGAGTCTCCGG--CCAATGAGGGGCGGT---------TCCCT---------CTCCTCT----GGACCCATGTGCGTCGGTCTCAGCGGAGCAGGCCCCGTTTG-TT-TACTGGGTTTTTCTGCCCACCGGAGCTCCACACAAGTGAGTCTGGGGCCACTGTGGGGACAGATAT-GGGGTGACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGTCGGGTCCCCAGAGAGGGGTCCCAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875190 266 - 16982598 GAGGGACAGAC-AGGGGCTGCAGCTCAGCTCTGCACATCTCCCTGGAGTGTGTTGGAGTCTCCGG--CCAATGAGGGGCGGT---------TCCCT---------CTCCTCT----GGACCCATGTGCGTCGGTCTCAGCGGAGCAGGCCCCGTTTG-TT-TACTGGGTTTTTCTGCCCACCGGAGCTCCACACAAGTGAGTCTGGGGCCACTGTGGGGACAGATAT-GGGGTGACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGTCGGGTCCCCAGAGAGGGGTCCCAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3676830 266 - 3785965 GAGGGACAGAC-AGGGGCTGCAGCTCAGCTCTGCACATCTCCCTGGCGTGTGTTGGAGTCTCCGG--CCAATGAGGGGCGGT---------TCCCT---------CTCCTCT----GGACCCATGTGCGTCGGTCTCAGCGGAGCAGGCCCTGTTTG-TT-TACTGGGTTTTTCTGCCCACCGGAGCTCCACACAAGTGAGTCTGGGGCCACTGTGGGGACAGATAT-GGGGTGACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGTGGGGTCCCCAGAGAGGGGTCCCAGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61660 266 - 179258 GAGGCACAGAC-AGGAGCTGCAGCTCAGCTCTGCACATCTCCCTGGCGTGTGTTGGAGTCTCTGG--CCAATGAGGGGCGGT---------TCCCT---------CTCCTCT----GGACCCATGTGCGTCGGTCTCAGCTGAGCAGGCCCTGTTTG-TT-TACTGGGTTTTTCTGCCCACCGGAGCTCCACACAAGTGAGTCTGGGGCCACTGTGGGGACAGATAT-GGGGTGACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGTGGGGTCCCCAGAGAGGGGTCCCAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547148 266 - 5823884 GAGGGACAGAC-AGGAGCTGCAGCTCAGCTCTGCACATCTCCCTGGCCTGTGCTGGGGTCTCCGG--CCAATGAGGGGCGGT---------TCCCT---------CTCCTCT----GGACCCGTGTGCATCGGTCTCAGCTGAGCAGGCCCTGTTTG-TT-TACTGAGTTTTTCTGCCCACCGGAGCTCCACAAAAGTGAGTCTGGGGCCACTGTGGGGACAGATAT-GGGGTGACCTTGAGCAGGCAGGACTCCAGGTGCAAAGACGTCAGGTCCCTAGAGAGGGGTCCCAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 29892 260 + 372756 GAGGGGCAG---AGAGGCTGCAGCTCAGCTCTGCACATCTCCCTGGCCTCTGCTAGAGTCTCCAG--CCAATGAGGGGTGGT---------TGCCT------------CTCT----GGACCCTCGTGCAGCAATCTCAGCCAAGCAGG--CTGTTTG-TT-TACTGAGTTTTTCTGCCCACCAGAGTCCCACAAAAGTGAGTCTGGGGCCACTGTTGGGACAGATGTGGGAGCAACCTTGAGCAGGCAGGACTCCAGGTACAAAGATGCCAGGTCTATAGAGAGGGGTCCCAGC i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16267397 256 + 16356641 GAGGGGCAG---AGGGGGTGCAGCTCAGCTCCGCACATCTCCCTGGCCTCTGCTAGAGTCTCCAG--CCAGTGAGGGGTGGT---------TCCCT------------CTCT----GGACCCTCGTGCAGCAATCTCAGCTGAGCAGG--CTGTTTG-TT-TAC----TTTTTCTGCCCACTGGAGCCCCACAAAAGTGAGTCTGGGGCCACTGTGGGGACAGATGTGGGAGCAACCTTGAGCAGGCAGGACTCCAGGTGCACAGATGCCAGGTCTATAGAGAGGGGTCCCAGC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1136418 260 + 1231380 GAGGGGCAG---GGGGGCTGCAGCTCAGCTCTGCACATCTCCCTGGCCTCTGCTAGAGTCTCCAG--CCAGTGAGAGGTCGT---------TCCCT------------CTCT----GGACCCTCGTGCAGCAATCTCAGCTGAGCAGG--CTGATTG-TT-TACTGAGTTTTTCTGCCCACCAGAGCCCCACAGAAGTGAGTCTGGGGCCACTGTAGGGACAGATGGGGGAGCAACCTTGAGCAGGCAGGACTCCAGGTGCAAAGATGCCAGGTCTGTGGAGAGGGGTCCCAGC i cebCap1.NW_016107870v1 C 0 I 4 s aotNan1.NW_018500483v1 2666513 260 + 11732439 GAGGGGCAG---AGGGGCTGCAGCTCAGCTCTGCACATCTCCCTGGCCTCTGCTAGAGTCTCCAG--CCAATGAGGGGTGGT---------TCCCT------------CTCT----GGACTCTCGTGCAGCAATCTCCGCTGAGCAGG--CTGTTTG-TT-TACTGAGTTCTTCTGCCCACGAGAGCCCCACAAAAGTGAGTCTGGGGCCACTGTGGGGACAGATGTGGGAGCAACCTTGAGCAGGCAGGTCTCCAGGTGCAAAGATGCCAGGTCTATAGAGAGGGGTCCCAGC i aotNan1.NW_018500483v1 C 0 I 4 s otoGar3.GL873542 22831169 246 + 22939663 -AGGGATAGGC--CAGGCTGCA-TTTGTCTGTGAGCATTTCCCGGGCCTCTGCTGGCATCT-GGC--CCAGAGAAGGGGGAG---------TCCCT---------TTCCAAT----GGACCCATGAACAGCCTTCCCAGCTGAGCAGGCCCTGTCTG-TTCTGTTGAGTTTTTCTGCCTGC-ATAGTCTTGTGACTATGAGTCTGGGGCCATT-------------CGGGGGCAACAC--AGCCTGTAGGACTCAGGGT--AGAGATGCCAGTTCCCTAAAGGGAGGTCACAGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47592692 239 + 47698779 -------------------------CAGATCTG------GCTCTAGCCTGGGTCATGG-CTCTGACCCCAGTGGAGGGAGATGCTAATTGATCTCTCAGGAGATTCTCCTCGCCGAGGACCCGTATGTATCTGCT-------AACAACCCTTGGTTGCCT-TTCTGACCTTATCTGTCCACTGGCGTCCTGTAAAAGTGAGTTTGGGGCTTCTGTGGGGACAGACCC-TGGGCAGTATGGAACAGGCAG-------GGTGCACAG-TGCCTGGTCCC-AAAGAGAGATC----- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=508081.000000 s hg38.chr20_KI270870v1_alt 94860 143 + 183433 CAGCGCCGCCCTCTGGGTGCCGGGAGCTGATCCCGAGAGGCTTGTTTTCCAGGAGACGTGCTCAGGATGGAGCGGTCTCTGATGTTCCGTTTCCCATTCGCATCCACGAGCAGGGATTCAGATTAACTCACTAGAAACTCAAT s panTro5.chr20 66421444 143 + 66533130 CAGCGCCACCCTCTGGGTGCCGGGAGCTGATCCCGAGAGGCTTGTTTTCCAGGAGACGTGCTCAGGATGGAGCGGTCTCTGATGTTCCGTTTCCCATTTGCATCCACGAGCAGGGATTCAGATTAACTCACGAGAAGCTCAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097172 143 + 62195757 CAGCGCCACCCTCTGGGTGCCGGGAGCTGATCCCGAGAGGCTTGTTTTCCAGGAGACGTGCTCAGGATGGAGCGGTCTCTGATGTTCCGTTTCCCATTTGCATCCACGAGCAGGGATTCAGATTAACTCACGAGAAGCTCAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485373 143 - 578057 CAGCGCCGCCCTCTGGGTGCCGGGAGCTGATCCCGAGAGGCTTGTTTTCCAGGAGACGTGCTCAGGATGGAGCGGTCTCTGATGTTCCGTTTCCCATTTGCATCCACGAGCAGGGATTCAGATTAACTCACGAGAAGTTCAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010473 143 - 110113093 TAGCGCTGCCCTCTGGGTGCTGGGAGCTGATCCTGAGAGGCTTGTTTTCCGAGAGACGTACTCAGGATGTAGCTGTCTCTGATGTTCCGTTTCCCATCTGCATCGACGAGCAGGGATTCAGATTAACTCACGAGAAACTTAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736434 107 - 92844088 CAGTGCTGCCCTCTGGGTGC------------------------------------CGTGCTCCGGGTGTTGCAGTCTCCGAAGTTCCGTTTCCCATTTGCATCGACGAGCAGGGATTCAGATTAACTCACGAGAAACTTAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404433 107 + 96509753 CAGTGCTGCCCTCTGGGTGC------------------------------------CGTGCTCCGGGTGTTGCAGTCTCTGAAGTTCCGTTTCCCATTTGCATCGACGAGCAGGGATTCAGATTAACTCACGAGAAACTTAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875456 107 - 16982598 CAGTGCTGCCCTCTGGGTGC------------------------------------CGTGCTCCGGGTGTTGCAGTCTCTGAAGTTCCGTTTCCCATTTGCATCGATGAGCAGGGATTCAGATTAACTCACGAGAAACTTAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677096 107 - 3785965 CAGTGCTGCCCTCTGGGTGC------------------------------------CGAGCTCAGGATGTTGCAGTCTCTGAAGTTCCGTTTCCCATTTGCATCGATGAGCAGGGATTCAGATTAACTCACGAGAAACTTAAT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 61926 107 - 179258 CAGTGCTACCCTCTGGGTGC------------------------------------CGTGCTCAGGATGTTGCAGTCTCTGAAGTTCCGTTTCCCATTTGCATCGATGAGCAGGGATTCAGATTAACTCACGAGAAACTTAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547414 107 - 5823884 CAGTGCTGCCCTCTGGGTGC------------------------------------CATGCTCAGGATGTTGCAGTCTCTGATGTTCCGTTTCCCATTTGCATGGACGAGCAGGGATTCTGATTAACTCACGAGAAACTTAAT i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22831415 124 + 22939663 TAGTGCCACCCTCCAG--------------TCCTAAGTGGCCTGTTATCTGAGAGAC-TGTTCAGGATGTGGTGGCCTCT-ATGCTTGGTCTCCAGTCTGCATTAGTGACCAGGGATTCAGATTACCTC---AGAGACTTAGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47592931 61 + 47698779 ---------------------------------------------------------------------------------ATGGCTTGTTTGCTGTTTGTGTCTATGAGCAGGGTTTCAGAAGAACTCATTGGAGACTAAG- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e saiBol1.JH378156 16267653 1 + 16356641 I e cebCap1.NW_016107870v1 1136678 4 + 1231380 I e calJac3.chrUn_GL286459 30152 1 + 372756 I e aotNan1.NW_018500483v1 2666773 4 + 11732439 I a score=20372.000000 s hg38.chr20_KI270870v1_alt 95003 3 + 183433 AAC s panTro5.chr20 66421587 3 + 66533130 AAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097315 3 + 62195757 AAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485516 3 - 578057 AAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010616 3 - 110113093 AAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736541 3 - 92844088 AAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404540 3 + 96509753 AAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875563 3 - 16982598 AAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677203 3 - 3785965 AAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62033 3 - 179258 AAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547521 3 - 5823884 AAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30153 3 + 372756 AAG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16267654 3 + 16356641 AAG i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22831539 1 + 22939663 --C i otoGar3.GL873542 C 0 I 2 s canFam3.chr24 47592992 3 + 47698779 AAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e cebCap1.NW_016107870v1 1136678 4 + 1231380 I e aotNan1.NW_018500483v1 2666773 4 + 11732439 I a score=609716.000000 s hg38.chr20_KI270870v1_alt 95006 62 + 183433 CCAAGAGAACAGGCTCGTCTGGATGAAAACCT--CCACTTCACTTCAGATTCCTGACAAGAAAG s panTro5.chr20 66421590 62 + 66533130 CCAAGAGAACAGGCTCGTCTGGATGAAAACCT--CCACTTCACTTCAGATTCCTGACAAGAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097318 62 + 62195757 CCAAGAGAACAGGCTCGTCTGGATGAAAACCT--CCACTTCACTTCAGATTCCTGACAAGAAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485519 62 - 578057 CGAAGAGAACAGGCTCGTCTGGATGAAAACCT--CCACTTCACTTCAGATTCCTGACAAGAAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010619 62 - 110113093 CCAAGAGAAAAGGCTCGTCTGGATGAAAACCT--CCACGTCACTTCAGATTCCCGACAAGAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736544 62 - 92844088 CCAAGAAAACAGGCTCGTCTGGATGAAAACCT--CCACTTCACTTCAGATTCCCGACAAGAAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404543 62 + 96509753 CCAAGAAAACAGGCTCGTCTGGATGAAAACCT--CCACTTCACTTCAGATTCCCGACAAGAAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875566 62 - 16982598 CCAAGAAAACAGGCTCGTCTGGTTGAAAACCT--CCACTTCACTTCAGATTCCCGACGAGAAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677206 62 - 3785965 CCAAGAAAACAGGCTCGTCTGGATGAAAACCT--CCGCTTCACTTCAGATTCCCGACAAGAAAG i cerAty1.NW_012001373v1 C 0 I 239 s manLeu1.NW_012101652v1 62036 62 - 179258 CCAAGAAAACAGGCTCGTCTGGATGAAAACCT--CCACTTCACTTCAGATTCCCGACAAGAAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547524 62 - 5823884 CCAAGAGAACAGGCTCATCTGGATGAAAACCT--CCACTTCACTTCAGATTCCCGACAAGAAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30156 62 + 372756 CCAAGAGTAAGGGCTTGTCTTGATGAAAACCT--CCTCTTCACTTTAGATTCCCGACAGGAAAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267657 62 + 16356641 CCAAGAGAAAGGGCTCGTCTTGATGAAAACCT--CCTCTTCACTTCAGATTCCCAACGAGAAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136682 62 + 1231380 CCAAGAGAAAGGGCTCATCTTGATGAAAACCT--CCTCTTCACTTCAGATTCCCAACGAGAAAG i cebCap1.NW_016107870v1 I 4 C 0 s aotNan1.NW_018500483v1 2666777 62 + 11732439 CCAAGAGAAAGGGCTTGTCCTGATGAAAACCT--CCTCTTCACTTCAGACTCCTGACGAGAAAG i aotNan1.NW_018500483v1 I 4 C 0 s otoGar3.GL873542 22831542 64 + 22939663 CCTAAAGGAAGGGTCTGCCTTGGTAAAAGCCTCCCCCCTGCACTTTAGATTCTTGTTAAGAAAG i otoGar3.GL873542 I 2 C 0 s canFam3.chr24 47592995 62 + 47698779 CCAAAGAAGGCAGCCTGTCTTGAGGAAAACAT--CCTCCTCACTTGCAAGTCCTGATGATAAAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=17187.000000 s hg38.chr20_KI270870v1_alt 95068 6 + 183433 GCCATG-- s panTro5.chr20 66421652 6 + 66533130 GCCATG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097380 6 + 62195757 GCCATG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485581 6 - 578057 GCCATG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010681 6 - 110113093 GCCACG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736606 6 - 92844088 TCCGCA-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404605 6 + 96509753 TCCGCA-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875628 6 - 16982598 TCCACA-- i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101652v1 62098 6 - 179258 TCCACA-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547586 6 - 5823884 TCCACA-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30218 6 + 372756 GCCATG-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267719 6 + 16356641 GCCATG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136744 6 + 1231380 GCCATG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666839 6 + 11732439 GGCATG-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22831606 6 + 22939663 ACAGTG-- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47593057 3 + 47698779 -----GAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e cerAty1.NW_012001373v1 3677268 239 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=729796.000000 s hg38.chr20_KI270870v1_alt 95074 96 + 183433 GTGATGACAACAGCACTGACGTCCTCATGGGTTCACT----TCCAGGCT---------CCGTCCACACATGTCTCTCCATCTCCAAATAATTCTTCccctcccactttg s panTro5.chr20 66421658 96 + 66533130 GTGATGACAACAGCACTGACGTCCTCATGGGTTCACT----TCCAGGCT---------CCGTCCACGCATGTCTCTCCATCTCCAAATAATTCTTCccctcccactttg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097386 96 + 62195757 GTGATGACAACAGCACTGACGTCCTCATGGGTTCACT----TCCAGGCT---------CCGTCCACGCATGTCTCTCCATCTCCAAATAATTCTTCccctcccactttg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485587 96 - 578057 GTGATGACAACAGCACTGACGTCCTCATGGGTTCACT----TCCAGGCT---------CCGTCCACGCATGTCTCTCCATCTCCAAATAATTCTTCccctcccactttg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010687 96 - 110113093 GTGATGACAACAGCGCTGACCTCCTCATGGGTTCACT----TCCAGGCT---------CCGTCCGTGCGTGTCTCTCCATCTCCAAATAATTCTTCccctcccacttta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736612 95 - 92844088 GTGATGGCAGCAGTGCTGACGTCCTCTTGGGTTCACT----TCCAGGCT----------CGTCCATGTGTGTCTCTCCATCTCcagataattctttccctctcacttta i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404611 95 + 96509753 GTGATGGCAGCAGTGCTGACGTCCTCTTGGGTTCACT----TCCAGGCT----------CGTCCATGTGTGTCTCTCCATCTCcagataattctttccctctcacttta i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875634 95 - 16982598 GTGATGGCAGCGGTGCTGACGTCCTCTTGGGTTCACT----TCCAGGCT----------CATCCATGTGTGTCTCTCCATCTCcagataattctttccctctcacttta i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677507 94 - 3785965 GTGATGGCAGCAGTGCTGACGTCCTC-TGGGTTCACT----TCCAGGCT----------CGTCCATGTGTGTCTCTCCATCTCCAAATAATTCTTTccctctcacttta i cerAty1.NW_012001373v1 I 239 C 0 s manLeu1.NW_012101652v1 62104 93 - 179258 GTGATGGCAGCAGTGCTGACGTCCTC-TGGGTTCACT----TCCAGGCT----------CGTCCATGTGTGTCTCTCCATCTCcaaataattctttccctctc-cttta i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547592 95 - 5823884 GTGATGGCAGCAGTGCTGACATCCTCTTGGGTTCACT----TGCAGGCT----------TGTCCGTGCGTGTCTCTCCATCTCCAAATAATTCTTTccctctcacttta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30224 96 + 372756 GTGGTGACGGCAGTGCTGATGTCCTCATGCTTTCAGT----TCCAGGCT---------CTTCCTATGCACGTCTCTCCATCTCCAAATACATCTTttcctcccatgtta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267725 95 + 16356641 GTGGTGACAGCAGCGCTGATGTCCTCATGGTTTCAGT----TCCAGGCC---------CTTCCCAGGCATGTCTCTCCATCTCCAAATATGTCTttg-ctcccacgtta i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136750 95 + 1231380 GTGGTGAAAGCAGCGCTGATGTTCTCATGGTTTCAGT----TCCAGGCT---------CTTCCCATGCATGTCTCTCCATCTCCAAATACGTCTCTG-CTCCCACGTTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666845 96 + 11732439 GTGGTGACAGCAGTGCTCACGTCCTCATGGTGTCAGC----TCCAGGCT---------CTTCCCACGCATGCCTCTCCATCTCCAAATACGCCTTTGCCTCCCACGTTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22831612 94 + 22939663 TTGACCATAA-GGCAGTGATTCCCCCAGGCATTCAC-----TGAAGGCT---------CTTTCCATCCAGGCCTCTTAGCCTCCACATAGTTCTTTCCCTTCTACCTTG i otoGar3.GL873542 C 0 I 13 s canFam3.chr24 47593060 93 + 47698779 ---------------GTGATATTCTCGTGCATTCGCTATGCACTAGGCACAGAGGCCACTTGCCACACATG-CTCTAAATCCCCAAAAGGTTCTTTTTTTCCCACTTTA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=843720.000000 s hg38.chr20_KI270870v1_alt 95170 104 + 183433 ----tgggtgaaggacttaagtctcagagagggtagtgacctgctgctcaggtctgagttggtggcagtgcCCTGTGTGAGCTTTGGGGACCCT--------TGTTCCCACCACAG s panTro5.chr20 66421754 104 + 66533130 ----tgggtgaaggacttaagtctcagagagggtagtgacctgctgctcaggtctgagttggtggcagtgcCCTGTGTGAGCTTTGGGGACTCT--------TGTTCCCACCACAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097482 104 + 62195757 ----tgggtgaaggacttaagtctcagagagggtagtgacctgctgctcaggtctgagttggtggcagtgcCCTGTGTGAGCTTTGGGGACCCT--------TGTTCCCACCACAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485683 104 - 578057 ----tgggtgaagaacttaagtctcagagagggtagtgacctgctgctcaggtctgagttggcggcagtgcCCTGTGTGAGCTTTGGGGACCCT--------TGTTCCCACCACAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010783 104 - 110113093 ----tgggtgaagaacttcagtctcagagagggtagtgacctgctgctcaggtctgagttggcggcagtgcCCTGTGTGAGCTTTGGGGACCCT--------TGTTCCTACCACAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736707 110 - 92844088 ----tgggtgaagagctgaagtctcagagagggtagggacctgcgggccaggcctgagttggcggcagagccCTGCGTGAGCTCTGGGGACGCT--TGTCCCTGTTCCCACCACAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404706 110 + 96509753 ----tgggtgaagagcttacgtctcagagagggtagggacctgcgggtcaggcctgagttggcggcagtgccCTGTGTGAGCTCTGGGGACGCT--TGTCCCTGTTCCCACCACAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875729 110 - 16982598 ----tgggtgaagaacttaagtctcagagagggtagggacctgctggtcaggcctgagttggcggcagtgccCTGTGTGAGCTCTGGGGACCCT--TGTCCCTGTTCCCACCACAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677601 110 - 3785965 ----tgggtgaagaacttaagtctcagagagggtagggacctgctggtcaggcctgagttggcggcagtgcCCTGTGTGAGCTCTGGGGACCCT--TGTTCCTGTTCCCACCACAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62197 110 - 179258 ----tgggtgaagaacttaagtctcagagagggtagggacctgctggtcaggcctgagttggcggcagtgccCTGTGTGAGCTCTGGGGACCCT--TGTTCCTGTTCCCACCACAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547687 110 - 5823884 ----tgggtgaagaactgaagtctcagagagggtagggacctgctggtcaggtctgagttggcggcagtgcCCTGTGTGAGCTCTGGGGACCCT--TGTTCCTGTTCCTACCACAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30320 104 + 372756 ----tgggtgaagaacttaagtctcacagagggttgtgacctgccggtcaGGTCTGAGTTGCTAGCAGTGCTCTGTGTGAGCTTTGGGGGCCCT--------TGTTCCCACTGCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267820 103 + 16356641 ----tgggtgaagaacttaagtctcacagagggtcatgacctaccggtcaGGTCTGAGTTGCTGGTGGTGCTCTGTGTGAGCTTTGGGGG-CCT--------TGTTCTCACCACAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136845 103 + 1231380 ----TGGGTGAAGAACTTAAGTCTCACAGAGGGTCGTGACCTG-TGGTCAAGTCTGAGTTGCTGGCAGTGCTCTGTGTGAGCTTTGGGGGCCCT--------TGTTCCCACCACAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2666941 100 + 11732439 ----TGTGCGAAGAACTTAAGTCTCACCGAGGGTCGTGACCTGCCGGTCAGATCTGAGTTGCTGGCAGTGCTCTGTGTGAGCTTTGGGGGCCCT--------TGTTCCCACC---- i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47593153 86 + 47698779 TGTGTGGATGAAGAA-------------------GATGACTTGCAGGTCAGGTGTGGG-----------ACCCAGAGCGAGACCTACATTCCCCCCTGCATCCCTGCCCCCCTCCG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e otoGar3.GL873542 22831706 13 + 22939663 I a score=318630.000000 s hg38.chr20_KI270870v1_alt 95274 32 + 183433 AGTGTCCATGGAGCAGCATGACTTCTGGAAGG- s panTro5.chr20 66421858 32 + 66533130 AGTGTCCATGGAGCAGCATGACTTCTGGAAGG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097586 32 + 62195757 AGTGTCCATGGAGCAGCATGACTTCTGGAAGG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485787 32 - 578057 AGTGTCCATGGAGCAGCATGACTTCTGGAAGG- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010887 32 - 110113093 AGTGTCCATGGAGCAGCATGACTTCTGGAAGG- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736817 30 - 92844088 A--GTCCATGGAGCAGCGTGACTCCTGGAAGG- i rheMac8.chr10 C 0 I 122 s macFas5.chr10 96404816 32 + 96509753 AGTGTCCATGGAGCAGCGTGACTCCTGGAAGG- i macFas5.chr10 C 0 I 5 s macNem1.NW_012014244v1 16875839 32 - 16982598 AGTGTCCATGGAGCAGCGTGACTCCTAGAAGG- i macNem1.NW_012014244v1 C 0 I 22 s cerAty1.NW_012001373v1 3677711 32 - 3785965 AGTGTCCATGGAGCAGCGTGACTCCTAGAAGG- i cerAty1.NW_012001373v1 C 0 I 22 s manLeu1.NW_012101652v1 62307 32 - 179258 AGTGTCCATGGAGTAGCGTGACTCCTAGAAGG- i manLeu1.NW_012101652v1 C 0 I 22 s colAng1.NW_012114444v1 5547797 32 - 5823884 AGTGTGCATGGAGCAGCATGACTCCTGGAAGG- i colAng1.NW_012114444v1 C 0 I 5 s calJac3.chrUn_GL286459 30424 32 + 372756 AGTGTCCATGGAGCAGCATGACTTCTGGAAGG- i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16267923 32 + 16356641 AGTGTCCATGGAGCAGCATGACTTCTGGAAGG- i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1136948 32 + 1231380 AGTGTCCATGGAGCAGCAGGACTTCTGGAAGG- i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2667041 30 + 11732439 AGTGTCCACGGAGCAGCATGAC--CTGGAAGG- i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22831719 32 + 22939663 AGTGTCCATAGAGCAGCCTTGCTTGTGGAAGG- i otoGar3.GL873542 I 13 C 0 s canFam3.chr24 47593239 32 + 47698779 GGTGTTGGCTG-GCAGCACGACTTCTAGAAGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=7800.000000 s hg38.chr20_KI270870v1_alt 95306 1 + 183433 G s panTro5.chr20 66421890 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097618 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485819 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010919 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96404853 1 + 96509753 G i macFas5.chr10 I 5 C 0 s colAng1.NW_012114444v1 5547834 1 - 5823884 G i colAng1.NW_012114444v1 I 5 C 0 s calJac3.chrUn_GL286459 30457 1 + 372756 G i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16267956 1 + 16356641 G i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1136981 1 + 1231380 G i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2667072 1 + 11732439 G i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22831751 1 + 22939663 G i otoGar3.GL873542 C 0 I 16 s canFam3.chr24 47593271 1 + 47698779 G i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e macNem1.NW_012014244v1 16875871 22 - 16982598 I e rheMac8.chr10 92736847 122 - 92844088 I a score=64372.000000 s hg38.chr20_KI270870v1_alt 95307 13 + 183433 CGTCTTTATGGAA s panTro5.chr20 66421891 13 + 66533130 CGTCTTTATGGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097619 13 + 62195757 CGTCTTTATGGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485820 13 - 578057 CGTCTTTATGGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010920 13 - 110113093 CGTCTTTATGGAA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96404854 13 + 96509753 CATCTCTGTGGAA i macFas5.chr10 C 0 C 0 s colAng1.NW_012114444v1 5547835 13 - 5823884 CATCTTTATGGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30458 13 + 372756 CGTCTTTATGGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267957 13 + 16356641 CATCTTTATGGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136982 13 + 1231380 CGTCTTTATGGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667073 13 + 11732439 CATCTTTATGGAA i aotNan1.NW_018500483v1 C 0 I 88 s canFam3.chr24 47593272 11 + 47698779 CATCTTGATGG-- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e macNem1.NW_012014244v1 16875871 22 - 16982598 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I a score=7790.000000 s hg38.chr20_KI270870v1_alt 95320 4 + 183433 CACC s panTro5.chr20 66421904 4 + 66533130 CACC i panTro5.chr20 C 0 I 135 s panPan2.chr20 62097632 4 + 62195757 CACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485833 4 - 578057 CACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010933 4 - 110113093 CACC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96404867 3 + 96509753 CCC- i macFas5.chr10 C 0 C 0 s colAng1.NW_012114444v1 5547848 4 - 5823884 CCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30471 4 + 372756 CCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267970 4 + 16356641 CCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136995 4 + 1231380 CCCC i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593283 0 + 47698779 C e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e macNem1.NW_012014244v1 16875871 22 - 16982598 I e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I a score=-1749.000000 s hg38.chr20_KI270870v1_alt 95324 3 + 183433 TCC s panTro5.chr20 66422043 3 + 66533130 TCC i panTro5.chr20 I 135 C 0 s panPan2.chr20 62097636 3 + 62195757 TCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485837 3 - 578057 TCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010937 3 - 110113093 TCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96404870 3 + 96509753 TCC i macFas5.chr10 C 0 C 0 s calJac3.chrUn_GL286459 30475 2 + 372756 TT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267974 2 + 16356641 TT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1136999 2 + 1231380 TT- i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593283 0 + 47698779 C e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e macNem1.NW_012014244v1 16875871 22 - 16982598 I e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I a score=29128.000000 s hg38.chr20_KI270870v1_alt 95327 16 + 183433 ACGTTTCCGTGGAGAG s panTro5.chr20 66422046 16 + 66533130 ACGTTTCCGTGGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097639 16 + 62195757 ACGTTTCTGTGGAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 485840 16 - 578057 ATGTTTCCGTGGAGAG i gorGor5.CYUI01015848v1 C 0 I 179 s nomLeu3.chr13 110010940 16 - 110113093 ACGTTTCTGTGGAGAG i nomLeu3.chr13 C 0 I 45 s macFas5.chr10 96404873 16 + 96509753 ACGTTTCTGTGGCGAG i macFas5.chr10 C 0 C 0 s cebCap1.NW_016107870v1 1137001 16 + 1231380 ACATTTTGGTGGAGAG i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47593283 15 + 47698779 -CATCTCTGCACAGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I a score=14795.000000 s hg38.chr20_KI270870v1_alt 95343 7 + 183433 ATTTCCT s panTro5.chr20 66422062 7 + 66533130 TTTTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097655 7 + 62195757 TTTTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 486035 7 - 578057 TTTTCCT i gorGor5.CYUI01015848v1 I 179 C 0 s nomLeu3.chr13 110011001 7 - 110113093 TTTTCCT i nomLeu3.chr13 I 45 C 0 s macFas5.chr10 96404889 7 + 96509753 TTTTCCT i macFas5.chr10 C 0 C 0 s cebCap1.NW_016107870v1 1137017 7 + 1231380 CTTTCCT i cebCap1.NW_016107870v1 C 0 C 0 s canFam3.chr24 47593298 7 + 47698779 CCTTCCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I a score=16875.000000 s hg38.chr20_KI270870v1_alt 95350 14 + 183433 GTAGCCCGTGGCCC s panTro5.chr20 66422069 14 + 66533130 GTAGCACGTGGCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097662 14 + 62195757 GTAGCGCGTGGCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 486042 14 - 578057 GTAGCACGTGGCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011008 14 - 110113093 GTAGCGTGTGGCCC i nomLeu3.chr13 C 0 C 0 s cebCap1.NW_016107870v1 1137024 14 + 1231380 TTAGCACGTGGCCC i cebCap1.NW_016107870v1 C 0 I 7 s canFam3.chr24 47593305 14 + 47698779 CAGGCCTGGGGACT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=5640.000000 s hg38.chr20_KI270870v1_alt 95364 5 + 183433 CGGCA s panTro5.chr20 66422083 5 + 66533130 TGGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097676 5 + 62195757 CGGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 486056 5 - 578057 CGGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011022 5 - 110113093 CGGCA i nomLeu3.chr13 C 0 C 0 s canFam3.chr24 47593319 5 + 47698779 CTGCA i canFam3.chr24 C 0 I 24 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=54246.000000 s hg38.chr20_KI270870v1_alt 95369 64 + 183433 TCCACGTTTCCGTGGAGACTTTTCCTGTAGCCTGTGGCCCCGGCATCCACGTTTCCGTGGAGAG s panTro5.chr20 66422088 64 + 66533130 TCCACGTTTCCGTGGAGAGTTTTCCTGTAGCACGTGGCCCTGGCATCCACGTTTCCGTGGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097681 64 + 62195757 TCCACGTTTCCATGGAGAGATTTCCTGTAGCATGTGGCCCCAGCATCCATGTTTCTGTGGAGAG i panPan2.chr20 C 0 T 109 s gorGor5.CYUI01015848v1 486061 64 - 578057 TCCACGTTTCCGTGGAGACTTTTCCTGTAGCATGTGGCCCCGGCATCCACGTTTCTGTGGAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011027 64 - 110113093 TCCACGTTTCTGTGGAGAGTTTTCCTGTAGCGTGTGGCCCCGGCATCCACGTTTCTGTGGAGAG i nomLeu3.chr13 C 0 T 86 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=819.000000 s hg38.chr20_KI270870v1_alt 95433 3 + 183433 TTT s panTro5.chr20 66422152 3 + 66533130 TTT i panTro5.chr20 C 0 I 1 s gorGor5.CYUI01015848v1 486125 3 - 578057 TTT i gorGor5.CYUI01015848v1 C 0 I 226 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e panPan2.chr20 62097745 109 + 62195757 T e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e nomLeu3.chr13 110011091 86 - 110113093 T e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=11724.000000 s hg38.chr20_KI270870v1_alt 95436 22 + 183433 CCTGTAGCACGTGGCTCCGGCA s panTro5.chr20 66422156 22 + 66533130 CCTGTAGCACGTGGCCCCGGCA i panTro5.chr20 I 1 C 0 s gorGor5.CYUI01015848v1 486354 22 - 578057 CCTGTAGCACGTGGCCCCGGCA i gorGor5.CYUI01015848v1 I 226 C 0 s nomLeu3.chr13 110011005 22 - 110113093 CCTGTAGCGTGTGGCCCCGGCA i nomLeu3.chr13 T 86 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e panPan2.chr20 62097745 109 + 62195757 T e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=15593.000000 s hg38.chr20_KI270870v1_alt 95458 19 + 183433 TCCACGTTTCCGTGGAGAC s panTro5.chr20 66422178 19 + 66533130 TCCATGTTTCCGTGGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097636 19 + 62195757 TCCACGTTTCTGTGGAGAG i panPan2.chr20 T 109 C 0 s gorGor5.CYUI01015848v1 486376 19 - 578057 TCCACGTTTCTGTGGAGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011027 19 - 110113093 TCCACGTTTCTGTGGAGAG i nomLeu3.chr13 C 0 T 90 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=22984.000000 s hg38.chr20_KI270870v1_alt 95477 26 + 183433 TTTTCCTGTAGCCCGTGGCCCCGGCA s panTro5.chr20 66422197 26 + 66533130 TTTTCCTGTAGCACGTGGCCCCGGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097655 26 + 62195757 TTTTCCTGTAGCGCGTGGCCCCGGCA i panPan2.chr20 C 0 T 45 s gorGor5.CYUI01015848v1 486395 26 - 578057 TTTTCCTGTAGCATGTGGCCCCGGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010956 26 - 110113093 TTTTCCTGTAGCGTGTGGCCCCGGCA i nomLeu3.chr13 T 90 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=38342.000000 s hg38.chr20_KI270870v1_alt 95503 45 + 183433 TCCATGTTTCCGTGGAGAGTTTTCCTGTAGCACGTGGCTCCGGCA s panTro5.chr20 66422223 45 + 66533130 TCCACGTTTCCGTGGAGACTTTTCTTGTAGCACGTGGCCCTGGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097636 45 + 62195757 TCCACGTTTCTGTGGAGAGTTTTCCTGTAGCGCGTGGCCCCGGCA i panPan2.chr20 T 45 T 45 s gorGor5.CYUI01015848v1 486421 45 - 578057 TCCACGTTTCCGTGGAGAGTTTTCCTGTAGCACGTGGCCCCGGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110010982 45 - 110113093 TCCACGTTTCTGTGGAGAGTTTTCCTGTAGCGTGTGGCCCCGGCA i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=48999.000000 s hg38.chr20_KI270870v1_alt 95548 56 + 183433 TCCACGTTTCCGTGGAGAGTTTTCCTGTAGCCTGTGGCCCCGGCATCCACGTTTCC s panTro5.chr20 66422268 56 + 66533130 TCCATGTTTCTGTGGAGACTTTTCCTGTAGCATGTGGCCCCGGCATCCACGTTTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097636 56 + 62195757 TCCACGTTTCTGTGGAGAGTTTTCCTGTAGCGCGTGGCCCCGGCATCCACGTTTCC i panPan2.chr20 T 45 C 0 s gorGor5.CYUI01015848v1 486466 56 - 578057 TCCACGTTTCCGTGGAGAGTTTTCCTGTAGCATGTGGCCCCGGCATCCACGTTTCC i gorGor5.CYUI01015848v1 C 0 I 159 s nomLeu3.chr13 110011027 56 - 110113093 TCCACGTTTCTGTGGAGAGTTTTCCTGTAGCGTGTGGCCCCGGCATCCACGTTTCT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=40970.000000 s hg38.chr20_KI270870v1_alt 95604 51 + 183433 GTGGAGAGATTTCCTGTAGCCCGTGGCCCCGGCATCCACGTTTCCGTGGAG s panTro5.chr20 66422324 51 + 66533130 GTGGAGACTTTTCATGTAGCACGTGGCCCCGGCATCCACGTTTCTGTGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097692 51 + 62195757 ATGGAGAGATTTCCTGTAGCATGTGGCCCCAGCATCCATGTTTCTGTGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 486681 51 - 578057 GTGGAGAGATTTCCTGTAGCACATGGCCCTGGCATCCACGTTTCTGTGGAG i gorGor5.CYUI01015848v1 I 159 C 0 s nomLeu3.chr13 110011083 51 - 110113093 GTGGAGAGTTTTCCTGTAGCGTGTGGCCCCGGCATCCACGTTTCTGTGGAG i nomLeu3.chr13 C 0 T 90 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=40105.000000 s hg38.chr20_KI270870v1_alt 95655 47 + 183433 ACTTTTCCTGTAGCCCGTGGCCCCGGCATCCATGTTTCCGTGGAGAG s panTro5.chr20 66422375 47 + 66533130 ACTTTTCCTGTAGCACGTGGCCCCGGCATCCATGTTTCTGTGGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097743 47 + 62195757 AGTTTTCCTGTAGCACGTGGCCCTGGCATCCACGTTTCCGTGGAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 486732 47 - 578057 AGTTTTCCTGTAGCACGTGGCCCCGGCATCCACGTTTCCGTGGAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011044 47 - 110113093 AGTTTTCCTGTAGCGTGTGGCCCCGGCATCCACGTTTCTGTGGAGAG i nomLeu3.chr13 T 90 I 43 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=72957.000000 s hg38.chr20_KI270870v1_alt 95702 90 + 183433 TTTTCCTGTGGCACGTGGCCCCGGCATCCACGTTTCCGTGGAGAGTTTTCCTGTAGCCCATGGCCCCGGCATCCACGTTTCCGTGGAGAC s panTro5.chr20 66422422 90 + 66533130 CTTTCCTGTAGCACGCGGCCCCGGCATCCACATTTCTGTGGAGAGTTTTCCTGTAGCACGTGGCCCCGGCATCCATGTTTCCGTGGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097790 90 + 62195757 TTTTCCTGTAGCACGTCGCCCCGGCATCCACGTTTCCGTGGAGAGTTTTCCTGTAGCACGTGGCCCCGGCATCCACGTTTCCGTGGAGAC i panPan2.chr20 C 0 T 135 s gorGor5.CYUI01015848v1 486779 90 - 578057 TTTTCCTGTAGCACGTGGCCCCGACATCCACGTTTCTGTGGAGAGTTTTCCTGTAGTATGTGGCCCCAGCATCCACGTTTCCGTGGAGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011134 88 - 110113093 TTTTCCTGTAGCGTGTGGCCCCGGCATCCACGTTTCTGTG--GAGTTTTCCTGTAGCGTGTGGCCCCGGCATCCACGTTTCTGTGGAGAG i nomLeu3.chr13 I 43 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=158115.000000 s hg38.chr20_KI270870v1_alt 95792 194 + 183433 TTTTCCTGTAGCCCGTGGCCCCGGCATCCACGTTTCCATGGAGACTTTTCCTGTAGCCTGTGGCCCCGGCATCCATGTTTCCGTGGAGAGTTTTCCTGTAGCACGTGGCTCCGGCATCCACGTTTCCGTGGAGAGTTTTCCTGTAGCCTGTGGCCCCGGCATCCACGTTTCCGTGGAGAGTTTTCCTGTGGCAC s panTro5.chr20 66422512 194 + 66533130 TTTTCCTGTAGCACGTGGCCCCGGCATCCACGTTTCCGTGGAGACTTTTCTTGTAGCACGTGGCCCTGGCATCCATGTTTCTGTGGAGAGTTTTCCTGTAGCATGTGGCCCCAGCATCCACGTTTCTGTGGAGACTTTTCATGTAGCACGTGGCCCCGGCATCCACGTTTCTGTGGAGACTTTTCCTGTAACAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097745 194 + 62195757 TTTTCCTGTAGCACGTGGCCCTGGCATCCACGTTTCCGTGGAGAGTTTTCCTGTAGCACGTCGCCCCGGCATCCACGTTTCCGTGGAGAGTTTTCCTGTAGCACGTGGCCCCGGCATCCACGTTTCCGTGGAGACTTTTCCTGTAGCATGTGGCCCCGGCATCCACGTTTCTGTGGAGACTTTTCTTGTAGCAC i panPan2.chr20 T 135 C 0 s gorGor5.CYUI01015848v1 486869 194 - 578057 TTTTCCTGTAGCACGTGGCCCCGGCATCCACGTTTCCGTGGAGAGTTTTCCTGTAGCACGTGGCCCCGGCATCCACGTTTCTGTGGAGACTTTTCCTGTAGCACGTGGCCCTGGCATCCACATTTCTGTGGAGACTTTTCCTGTAGCATGTGGCCCCGGCATCCACGTTTCCGTGGAGAGTTTTCCTGTAGCAC i gorGor5.CYUI01015848v1 C 0 I 221 s nomLeu3.chr13 110011222 190 - 110113093 TTTTCCTGTAGCCTGTGGCCCCGGCATCCACGTTTCTGTGGAGAGTTTTCCTGTAGCGTGTGGCCCCGGCATCCACGTTTCTGTGGAGAGTTTTCCTGTAGCGTGTGGCCCCGGCATCCACGTTTCTGTGGAG--TTTTCCTGTAGCGTGTGGCCCCGGCATCCACGTTTCTGTGGAG--TTTTCCTGTAGCCT i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=78470.000000 s hg38.chr20_KI270870v1_alt 95986 96 + 183433 GTGGCCCCGGCATCCACGTTTCTGTGGAGAGTTTTCCTGTGGCACGTGGCCCCGGCATCCACGTTTCCGTGGAGACTTTTCCTGTAGCCTGTGGCC s panTro5.chr20 66422706 96 + 66533130 GTGGCCCCGGCATCCACGTTTCTGTGGAGAGATTTCCTGTAGCACGTGGCCCCGGCATCCACGTTTCCATGGAGACTTTTCCTGTAGCATGTGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62097939 96 + 62195757 GTGGCCCCGGCATCCACGTTTCTGTGGAGACTTTTTCTGTAGCACGTGGCCCCGGCATCCATGTTTCTGTGGAGACTTTTCCTGTAGCATGTGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487284 96 - 578057 GTGGCCCCAGCATCCACGTTTCTGTGGAGAGTTTTCTTGTAGCATGTGGTCCCGGCATCCACGTTTCTGTGGAGACTTTTCCTGTAGCATGTGGCC i gorGor5.CYUI01015848v1 I 221 C 0 s nomLeu3.chr13 110011412 92 - 110113093 GTGGCCCCGGCATCCACGTTTCTGTGGAG--TTTTCCTGTAGCCTGTGGCCCCGGCATCCACGTTTCTGTGGAG--TTTTCCTGTAGCCTGTGGCC i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181774637 5098 + 182113224 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=6530.000000 s hg38.chr20_KI270870v1_alt 96082 6 + 183433 CCGGCA s panTro5.chr20 66422802 6 + 66533130 CCGGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098035 6 + 62195757 CCGGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487380 6 - 578057 CCGGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011504 6 - 110113093 CCGGCA i nomLeu3.chr13 C 0 C 0 s mm10.chr2 181779735 6 + 182113224 CTGGTC i mm10.chr2 I 5098 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e cerAty1.NW_012001373v1 3677743 22 - 3785965 I e colAng1.NW_012114444v1 5547852 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e manLeu1.NW_012101652v1 62339 22 - 179258 I e saiBol1.JH378156 16267976 0 + 16356641 C e macNem1.NW_012014244v1 16875871 22 - 16982598 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=4095.000000 s hg38.chr20_KI270870v1_alt 96088 1 + 183433 T s panTro5.chr20 66422808 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098041 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487386 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011510 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s macNem1.NW_012014244v1 16875893 1 - 16982598 T i macNem1.NW_012014244v1 I 22 C 0 s cerAty1.NW_012001373v1 3677765 1 - 3785965 T i cerAty1.NW_012001373v1 I 22 C 0 s manLeu1.NW_012101652v1 62361 1 - 179258 T i manLeu1.NW_012101652v1 I 22 C 0 s colAng1.NW_012114444v1 5547852 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s mm10.chr2 181779741 1 + 182113224 T i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e saiBol1.JH378156 16267976 0 + 16356641 C e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e otoGar3.GL873542 22831752 16 + 22939663 I e macFas5.chr10 96404896 0 + 96509753 C a score=9690.000000 s hg38.chr20_KI270870v1_alt 96089 2 + 183433 CC s panTro5.chr20 66422809 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098042 2 + 62195757 CC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487387 2 - 578057 CC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011511 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 s macNem1.NW_012014244v1 16875894 2 - 16982598 CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677766 2 - 3785965 CC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62362 2 - 179258 CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547853 2 - 5823884 CC i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22831768 2 + 22939663 CT i otoGar3.GL873542 I 16 C 0 s mm10.chr2 181779742 2 + 182113224 CC i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e saiBol1.JH378156 16267976 0 + 16356641 C e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30477 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e macFas5.chr10 96404896 0 + 96509753 C a score=93597.000000 s hg38.chr20_KI270870v1_alt 96091 24 + 183433 ACGTTTCCGTGGAGAGTTTTCCT-G s panTro5.chr20 66422811 24 + 66533130 ACGTTTCCGTGGAGAGTTTTCCT-G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098044 24 + 62195757 ACGTTTCCGTGGAGAGTTTTCCT-G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487389 24 - 578057 ACGTTTCTGTGGAGAGTTTTCCT-G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011513 22 - 110113093 ACGTTTCTGTG--GAGTTTTCCT-G i nomLeu3.chr13 C 0 C 0 s macNem1.NW_012014244v1 16875896 23 - 16982598 ACATTTCTGTGGCGAGTTTTCCT-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677768 23 - 3785965 ACATTTCTGTGGCGAGTTTTCCT-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62364 23 - 179258 ACATTTCTGTGGCGAGTTTTCCT-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547855 24 - 5823884 ACATTTCTGTGGAGAGTTTTCCTT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30477 24 + 372756 ACATTTTGGTGGAGAGTTTTCCT-T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16267976 24 + 16356641 ACATTTTGGTGGAGAGTTTTCCT-T i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22831770 22 + 22939663 ACAATTCTGTG--CAGTTTTACT-T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779744 24 + 182113224 ACACTCCTGGGTAGGGCTCTCCT-C i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I e macFas5.chr10 96404896 0 + 96509753 C a score=50622.000000 s hg38.chr20_KI270870v1_alt 96115 27 + 183433 --------TGGCACGTGGCCCCGG----------------------------------------------------------------------------------------CATGTTGTTTG s panTro5.chr20 66422835 115 + 66533130 --------TAGTACGTGGCCCTGGCATCCACGTTTCCGTGGAGACTTTTCCTGTAGCATGTGGCCCCGGCATCCACGTTTCCGTGGAGAGTTTTCCTGTAGTACGTGGCCTACATGTTGTTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098068 27 + 62195757 --------TAGTACGTGGCCCCGG----------------------------------------------------------------------------------------CATGTTGTTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487413 27 - 578057 --------TAGCACATGGCCCCGG----------------------------------------------------------------------------------------CATGTTGTTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011535 27 - 110113093 --------TAGCCTGTGGCCCTGG----------------------------------------------------------------------------------------CATGTTGTTTT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96404896 26 + 96509753 --------CAGCACGTGGCCCTGG-----------------------------------------------------------------------------------------ATGTTGTTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875919 26 - 16982598 --------CAGCACGTGGCCCTGG-----------------------------------------------------------------------------------------ATGTTGTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677791 26 - 3785965 --------CAGCACGTGGCCCTGG-----------------------------------------------------------------------------------------ATGTTGTTTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62387 26 - 179258 --------CAGCACGTGGCCCTGG-----------------------------------------------------------------------------------------ATGTTGTTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547879 27 - 5823884 --------TAGCACGTGGCCCCGG----------------------------------------------------------------------------------------CATGTTGTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30501 20 + 372756 --------TAGCACGTGGCCCTGG----------------------------------------------------------------------------------------TACG------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268000 20 + 16356641 --------TAGCATGTGGCCCTGG----------------------------------------------------------------------------------------TATG------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22831792 24 + 22939663 --------TCATCTGTGACCTTGC---------------------------------------------------------------------------------------ACATCTTG---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779768 25 + 182113224 AGATTAGTTAGTACTT------------------------------------------------------------------------------------------------TATGCTGTT-- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56850371 683 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I a score=35629.000000 s hg38.chr20_KI270870v1_alt 96142 6 + 183433 GGTGCA s panTro5.chr20 66422950 6 + 66533130 GGTGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098095 6 + 62195757 GGTGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487440 6 - 578057 GGTGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011562 6 - 110113093 GGTGCA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96404922 6 + 96509753 GGTGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875945 6 - 16982598 GGTGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677817 6 - 3785965 GGTACA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62413 6 - 179258 GGTGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547906 6 - 5823884 GGTGCA i colAng1.NW_012114444v1 C 0 C 0 s micMur3.chr18 56851054 6 + 57149010 GGTGCG i micMur3.chr18 I 683 C 0 s otoGar3.GL873542 22831816 6 + 22939663 GGTGCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181779793 0 + 182113224 C e dasNov3.JH569290 230942 408 - 397369 I e saiBol1.JH378156 16268020 0 + 16356641 C e cebCap1.NW_016107870v1 1137038 7 + 1231380 I e calJac3.chrUn_GL286459 30521 0 + 372756 C e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I a score=167771.000000 s hg38.chr20_KI270870v1_alt 96148 19 + 183433 TGGGGACTTAATGTGCTGC s panTro5.chr20 66422956 19 + 66533130 TGGGGGCTTAATGTGCTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098101 19 + 62195757 TGGGGGCTTAATGTGCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487446 19 - 578057 TGGGGGCTTAATGTACTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011568 19 - 110113093 TGGGGGCTTAATGTGCTGC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96404928 19 + 96509753 CGGGGGCTCCACGTGCTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875951 19 - 16982598 TGGGGGCTTAATGTGCTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677823 19 - 3785965 TGGGGGCTTAATGTGCTGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62419 19 - 179258 TGGGGGCTTCATGTGCTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547912 19 - 5823884 TGGGGGCTTAATGTGCTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30521 19 + 372756 TGTGGACTTAATGTGCTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268020 19 + 16356641 TGGGGTCTTAATGTGCTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137045 19 + 1231380 TGGGGGCTTAATGTGCTGC i cebCap1.NW_016107870v1 I 7 C 0 s micMur3.chr18 56851060 19 + 57149010 TGGGGACTTAATGTGCTGC i micMur3.chr18 C 0 I 84 s otoGar3.GL873542 22831822 19 + 22939663 CAGGGGCTTGATTTGCTGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779793 16 + 182113224 ---GGACTTAGTATGTGAT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 230942 408 - 397369 I e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I a score=98558.000000 s hg38.chr20_KI270870v1_alt 96167 17 + 183433 TAGAGATGCTGATTGAG s panTro5.chr20 66422975 17 + 66533130 TAGGGATGCTGATTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098120 17 + 62195757 TAGGGATGCTGATTGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487465 17 - 578057 TAGGGATGCTGATTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011587 17 - 110113093 CGGGGATGCTGACTGAG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96404947 17 + 96509753 CGGGGATGCCGATTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875970 17 - 16982598 CAGGGATGCCGATTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677842 17 - 3785965 CAGGGATGCCGATTGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62438 17 - 179258 CAGGGATGCCGATTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547931 17 - 5823884 CAGGGATGCTGATTGCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30540 17 + 372756 TGGGGATGCTGATTGCG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268039 17 + 16356641 TGGGGATGCTGATTGCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137064 17 + 1231380 TGGGGATGCTGATTGCG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22831841 17 + 22939663 CTGGGGAGAGGTGTATG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779809 17 + 182113224 CAGAATTATGGATTTTA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e canFam3.chr24 47593324 24 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851079 84 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I a score=616.000000 s hg38.chr20_KI270870v1_alt 96184 9 + 183433 C-AGAGCCTA-- s panTro5.chr20 66422992 9 + 66533130 C-AGAGCCTA-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098137 9 + 62195757 C-AGAGCCTA-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487482 9 - 578057 C-AGAGCCTA-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011604 9 - 110113093 C-AGAGCCTA-- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96404964 6 + 96509753 TGAGAG------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875987 6 - 16982598 TAAGAG------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677859 10 - 3785965 TAAGAGCCTG-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62455 10 - 179258 TAAGAGCCTC-- i manLeu1.NW_012101652v1 C 0 I 2 s colAng1.NW_012114444v1 5547948 10 - 5823884 CAAGAGCCTG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30557 9 + 372756 C-AGAGCCTT-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268056 9 + 16356641 C-AGAGCCTA-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137081 9 + 1231380 C-GGAGCCTA-- i cebCap1.NW_016107870v1 C 0 I 6 s otoGar3.GL873542 22831858 7 + 22939663 CCATATC----- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779826 9 + 182113224 T-AGAGTCTA-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47593348 9 + 47698779 ---CAGTTCATT i canFam3.chr24 I 24 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851079 84 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e aotNan1.NW_018500483v1 2667086 88 + 11732439 I e rheMac8.chr10 92736847 122 - 92844088 I a score=110667.000000 s hg38.chr20_KI270870v1_alt 96193 24 + 183433 CAGACAGGAGA-GCTTTGTCTGGGG s panTro5.chr20 66423001 24 + 66533130 CAGACAGGAGA-GCTTTGTCTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098146 24 + 62195757 CAGACAGGAGA-GCTTTGTCTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487491 24 - 578057 CAGACAGGAGA-GCTTTGTCTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011613 24 - 110113093 CAGACAGGAGA-GCTTTGTCTGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736969 24 - 92844088 CAGGCAGGAGA-GCTTTGTCTGGGG i rheMac8.chr10 I 122 C 0 s macFas5.chr10 96404970 24 + 96509753 CGGGCAGGAGA-GCTTTGTCTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16875993 24 - 16982598 CAGACAGGAGA-GCTTTGTCTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677869 24 - 3785965 CAGACAGGAGA-GCTTTGTCTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62467 20 - 179258 CAGACAGGAGA-GCTT----TGGGG i manLeu1.NW_012101652v1 I 2 C 0 s colAng1.NW_012114444v1 5547958 24 - 5823884 CAGACAGGAGA-GCGTTGTCTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30566 6 + 372756 TGGACG------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268065 6 + 16356641 TGGATG------------------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22831865 24 + 22939663 CAGACAGGAGG-ATCTTGTCTGGGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779835 15 + 182113224 --GATAGTAGA--------CTAAAG i mm10.chr2 C 0 I 1 s canFam3.chr24 47593357 25 + 47698779 CAGACAGGAGGGGTCTTGCCTGTGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851079 84 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e cebCap1.NW_016107870v1 1137090 6 + 1231380 I e aotNan1.NW_018500483v1 2667086 88 + 11732439 I a score=20229.000000 s hg38.chr20_KI270870v1_alt 96217 2 + 183433 TG s panTro5.chr20 66423025 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098170 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487515 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011637 2 - 110113093 TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736993 2 - 92844088 CG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404994 2 + 96509753 TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876017 2 - 16982598 TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677893 2 - 3785965 TG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62487 2 - 179258 TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547982 2 - 5823884 TG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30572 2 + 372756 TG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268071 2 + 16356641 TG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137096 2 + 1231380 TG i cebCap1.NW_016107870v1 I 6 C 0 s otoGar3.GL873542 22831889 2 + 22939663 TG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779851 2 + 182113224 TA i mm10.chr2 I 1 C 0 s canFam3.chr24 47593382 2 + 47698779 CG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851079 84 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I e aotNan1.NW_018500483v1 2667086 88 + 11732439 I a score=360128.000000 s hg38.chr20_KI270870v1_alt 96219 38 + 183433 GAGCCTACTGAGCCCATGGGGCAGGGTTTGGCCATACA s panTro5.chr20 66423027 38 + 66533130 GAGCCTACTGAGCCCATGGGGCAGGGTTTGGCCATACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098172 38 + 62195757 GAGCCTACTGAGCCCATGGGGCAGGGTTTGGCCATACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487517 38 - 578057 GAGCCTACTGAGCCCATGGGGCAGGGTTTGGCCATACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011639 38 - 110113093 GAGCCTACTGAGCCCATGGGGCAAGGCTTGGCCATACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92736995 38 - 92844088 GAGCCTACTGAGCCCGTGGGGCAGGGCTTGGCCACACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96404996 38 + 96509753 GAGCCCACTGAGCCCGTGGGGCAGGGCTTGGCCACACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876019 38 - 16982598 GAGCCTACCGAGCCCATGGGGCAGGGCTTGGCCACACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677895 37 - 3785965 GAGCCTACTGAGCCCAT-GGGCAGGGCTTGGCCACACA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62489 38 - 179258 GAGCCTACTGAGCCCATGGGGCAGGGCTTGGCCACACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5547984 38 - 5823884 GAGCCTACTGAGCCCATGGGGCAGGGCTTGGCCGTACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30574 38 + 372756 GAGCCTACTGAGCCCACGGGGCAGGGCGTGGCCACACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268073 38 + 16356641 GAGACTACTGAGCCCACGGGGCAGGGCGTGGCCACATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137098 38 + 1231380 GAGCCTACTGAGCCCACGGGGCAGGGCGTGGCCACACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667174 38 + 11732439 GAGCCTGCTGAGCCCACGGGGCGGGGCGTGGCCACACA i aotNan1.NW_018500483v1 I 88 C 0 s otoGar3.GL873542 22831891 25 + 22939663 GAGCATGGTAAGTCCACGTGGCAAG------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779853 38 + 182113224 TAGCATGCAGAGTTCATAGGGCAGGACCTTGCCATATA i mm10.chr2 C 0 C 0 s canFam3.chr24 47593384 15 + 47698779 -----------------------GAGCCTGGCCACGTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851079 84 + 57149010 I e dasNov3.JH569290 230942 408 - 397369 I a score=206620.000000 s hg38.chr20_KI270870v1_alt 96257 23 + 183433 CAGGCCCCAGTAGGGGA--CCAAGA s panTro5.chr20 66423065 23 + 66533130 CAGGCCCCAGTAGGGGA--CCAAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098210 23 + 62195757 CAGGCCCCAGTAGGGGA--CCAAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487555 23 - 578057 CAGGCCCCAGTAGGGGA--CCAAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011677 23 - 110113093 CAGGCCCCAGTAGGGGA--CCAAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737033 22 - 92844088 CAGGCCCCAGTGGGGGA---CAAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405034 22 + 96509753 CAGGCCCCAGTGGGGGA---CAAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876057 22 - 16982598 CAGGCCCCAGTGGGGGA---CAAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677932 22 - 3785965 CAGGCCCCAGTGGGGGA---CAAGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62527 22 - 179258 CAGGCCCCAGTGGGGGA---CAAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548022 22 - 5823884 CAGGCCCCAGGAGGGGA---CAAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30612 23 + 372756 CAGGACCCAGTAGGGGA--CTGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268111 23 + 16356641 CAGGTCCCACTCGGGGA--CCGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137136 22 + 1231380 CAGGCCCCAGTC-GGGA--CCAAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667212 23 + 11732439 CAGGCCCCGGTCGGGGA--CCCAGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56851163 23 + 57149010 CAGGTCCCTGTGGGGGA--CCCAGA i micMur3.chr18 I 84 C 0 s otoGar3.GL873542 22831916 19 + 22939663 ----TCCCAGTGGGAGA--CCAGGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779891 22 + 182113224 TATGTCCCAGTGTAAAA---TAAAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47593399 25 + 47698779 CACTCCCCAGAGGGGGAGACAAAGA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 230942 408 - 397369 I a score=795686.000000 s hg38.chr20_KI270870v1_alt 96280 67 + 183433 GGGCCACAGG-----------------AGAAGAACTGGCATACCTTACTG--GGCTTCTAGTAGTGATAGCCGTTTGCTGCCAAGA s panTro5.chr20 66423088 67 + 66533130 GGGCCACAGG-----------------AGAAGAACTGGCATACCTTACTG--GGCTTCTAGTAGTGATAGCCGTTTGCTGCCAAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098233 67 + 62195757 GGGCCACAGG-----------------AGAAGAACTGGCATACCTTACTG--GGCTTCTAGTAGTGATAGCCGTTTGCTGCCAAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487578 67 - 578057 GGGCCACAGG-----------------AGAAGAACTGGCATACCTTACTG--GGCTTCTAGTAGTGTTAGCCGTTTGCTGCCAAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011700 67 - 110113093 GGGCCACAGG-----------------AGAAGAACTGGCGTACCTTACTG--GGCTTCTAGTAGTGATCGTCGTTTGCTGCCAAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737055 67 - 92844088 GGGCCACAGG-----------------AGAAGAACTGGCATACCTTACTG--GGCTTCTAGTAGTGATTGTTGTTTGCTGCCAAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405056 67 + 96509753 GGGCCACAGG-----------------AGAAGAACTGGCATACCTTACTG--GGCTTCTAGTAGTGATTGTTGTTTGCTGCCAAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876079 67 - 16982598 GGGCCACAGG-----------------AGAAGAACTGGCAAACCTTACTG--GGCTTCTAGTAGTGATTGTTGTTTGCTGCCAAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3677954 67 - 3785965 GGGCCACAGG-----------------AGAAGAACTGGCATACCTTACTG--GGCTTCTAGTAGTGATTGTCGTTTGCTGCCAAGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62549 67 - 179258 GGGCCACAGG-----------------AGAAGAACTGGCATACCTTACTG--GGCTTCTAGTAGTGATTGTCGTTTGCTGCCAAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548044 67 - 5823884 GGGCCACAGG-----------------AGAAGAACTGGCATACCTTACTG--GGCTTCTAGTAGTGATTGTCATTTGCTGCCAAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30635 64 + 372756 GAGCCATAGG-----------------AGAGGAGCTGGTAAACCTTACTG--GGCTTCTAACAGTGC---TTGTTTGCTGCCAAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268134 67 + 16356641 GAGCCACAGG-----------------AGAGGAGCTGGTATACCTTACTG--GGCTTCTCATAGTGCTTTTTGTTTGCTGCCAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137158 67 + 1231380 GAGCCACAGG-----------------AGAGGAGCTGGTATACCTTACTG--GGCTTCTAATAGTGCTTGTTGTTTGCTGCCAAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667235 67 + 11732439 GAGCCACAGA-----------------AGAGGAGCTGGTGTACCTTACTG--GGCTTCTAATGGTGCTTGTTATTTGCTGCCAAAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56851186 67 + 57149010 GGCCCACAGG-----------------AGAAGAACGGGCACACCCTGCTG--GGCTACTGGCAGTGACTGTGGTTTGCTGCCAAGA i micMur3.chr18 C 0 I 115 s otoGar3.GL873542 22831935 67 + 22939663 GGGCCAAAGG-----------------AGAAGACGTGGCACACCTCACTG--GACTTCTGCTAATAACTGTTGTTTGCTGGCAAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779913 58 + 182113224 GGATCATATG-----------------AGA---------ACCCCACACTGCTGACTCCTTTTAGTGATTCTTA-TTGCTG-CAAGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47593424 84 + 47698779 GGACCCCAAGGTGCTTTCCCAGCAAAAAGAAGCATGGCCACACTTTGCTG--GGTTTCTAGTAGTGACTGTACTTTGCTGCCAAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 231350 65 - 397369 GGGCCCCA-------------------AGCATCGCCGATGTACTTTACTG--GGCTTCTACTAGGAACCACAATTTGCTGCCAAGA i dasNov3.JH569290 I 408 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=1053720.000000 s hg38.chr20_KI270870v1_alt 96347 129 + 183433 CATTTCCTAGGAGAGGGAGGCTA--TCATGTCAAGGTTGAGCCGGGTCCTCAGGCCCTTGTAAAGGAGGGTCTACGCTTGGGGGTTTGTG-----GTTACTTGTGTGCTCTGTA-CCCAGGGGTATGGT-GCACAGG-T s panTro5.chr20 66423155 138 + 66533130 CATTTCCTGGGAGAGGGAGGCTAAATCATGTCAAGGTTGAGCCGGGTCCTCAGGTCCTTGTAAAGGAGGGTCTAAGCTTGGCGGTTTGTGCTTTGATTACTTGTGTGCTCTGTATCCCAGGGGTGTGGT-GCACAGGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098300 138 + 62195757 CATTTCCTGGGAGAGGGAGGCTAAATCATGTCAAGGTTGAGCCGGGTCCTCAGGTCCTTGTAAAGGAGGGTCTAAGCTTGGCGGTTTGTGCTTTGATTACTTGTGTGCTCTGTATCCCAGGGGTGTGGT-GCACAGGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487645 138 - 578057 CATTTCCTGGAAGAGGGAGGCTAAATCATGTCAAGGTTGAGCCGGGTCCTCAGGTCCTCGTAAAGGAGGGTCTAAGCTTGGGGGTTTGTGCTTTGATGACTTGTGTGCTCTGTATCCCAGGGGTGTGGT-GCACAGGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011767 138 - 110113093 CATTTCCTGCAGAAGGGAGGCTAAATCTTGTCAGGGTTGAGCCGGGTCCTCAGGTCCTCATAAAGGAGGGTCTAAGCTTGGGGGTTTGTGCTTTGATTACTTGTGTGCTCTGTATCCCAGGGGTGTGGC-ACAAAGGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737122 124 - 92844088 CATTTCCTGGAAAAGGGAGGCTAAATCATGTCAAGGTTGAGCCGGGTCCTCGAGTCCTCATAAAGGAGGTTCTAAGCTTGGGGGTATGTACTTTGATTACTTGTGTGCTCTGTATCCCAGGGG---------------T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405123 124 + 96509753 CATTTCCTGGAAAAGGGAGGCTAAATCATGTCAAGGTTGAGCCGGGTCCTCGAGTCCTCATAAAGGAGGTTCTAAGCTTGGGGGTATGTACTTTGATGACTTGTGTGCTCTGTATCCCAGGGG---------------T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876146 124 - 16982598 CATTTCCTGGAAAAGGGAGGCTAAATCATGTCAAGGTTGAGCCGGGTCCTCGAGTCCTCATAAAGGAGGTTCTAAGCTTGGGGGTATGTACTTTGATTACTTGTGTGCTCTGTATCCCAGGGG---------------T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678021 124 - 3785965 CATTTCCTGGAAAAGGGAGGCTAAATCATATCAAGGTTGAGCCGGGTCCTCGAGTCCTCATAAAGGAGGTTCTAAGCTTGGGGGTATGTACTTTGATGACTTGTGTGCTCTGTATCCCAGGGG---------------T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62616 124 - 179258 CATTTCCTGGAAAAGGGAGGCTAAATCATGTCAAGGTTGAGCCGGGTCCTCGAGTCCTCATAAAGGAGGTTCTAAGCTTGGGGGTATGTACTTTGATTACTTGTGTGCTCTGTATCCCAGGAG---------------T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548111 124 - 5823884 CATTTCCTGGAAAAGGGAGGCTAAATTCTGTCAAGGTTGAGCCGGGTCCTCGGGTCCTCATAAAGGAGGTTCTAAGCTTGAGGGTATGTACTTTGATTATTTGTGTGCTCTGTATCCCAGGGG---------------T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30699 137 + 372756 CATTTCCTGGAAAAGGGAGGCTAAATCATGTCAAGGTCGAGCTGGGTCCTCAGGTCCTCACAGATGAGGTTCTGAGCTTGGGGGTATGTACTTTGATTACTTGTGTGCTCTGCAT-CCAGGGGTGTGGT-GCAAAGGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268201 137 + 16356641 CATCTCCTGGAACAGGGAGGCTGAATCACGTCAAGGTCGAGCTGAGTCCTCGGGTCCTCGTAGATGAGGTTCTGAGCTTGGGGGTATGTACTTCAATTACTGCTGTACTCTGCAT-CCAGGGGTGGGGT-GCAAAGGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137225 137 + 1231380 CATTTTTTGGAAAAGGAAGGCTAAATCATGTCAAGGTCGAGCGGGGTCCTCAGGTCCTCATAGATGAGATTCTGAGCTTGGGGGTATGTACTTTGATTACTTGTGTGCTCTGCAT-CCAGGGGTGTGGT-GCAAGGGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667302 137 + 11732439 CATTTCCTGGAAAAGGGAGGCTAAATCATGTCAAGGTCGAGCTGGGTCCTCAGGTCCTCGTAGATGAGGTTCTGAGCTTGGGGGTGTGTACTTTGATTACTTGTGTGCTCTGCAT-CCAGGGGTGTGGT-GCAAAGGCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22832002 124 + 22939663 AATTCCCCAGAAAAAGGAGGCAGAATCATGTTGTGGTTGAGCTGGGT--------ACATGTGAATGTGGTTCTGAGCATGA--GTGTGTGCTTTGACCAAT-GTATGCTGCATGTCCCAGGAG--TGGT-GCGAGGTC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181779971 127 + 182113224 -AACTTGCAGACAAAGGAAGAAAAATTGTGTCATGCT--------GCTTTCAGGATCTTTTATACAAAGTTTTGA-CATGGGTGTCAGCACTTTGCTGAGCTCTATGATCTGTGTCTACGGGTTATGAG-GAAAAGCC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47593508 123 + 47698779 -ATTTCCCAGGAAAAGGAAA--GAGTTGCATCAAGGTAGAGCTGGGT--------CATCATAAATGAGGTTCTGA-CCTGGGGGGGGGTGCTTTGTTTACCTTGGCTCCC---GTCCCCGGGGCATGGCAACAAACGC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 231415 80 - 397369 AATTCCCCAGAAAAGGAAAGTGGAACCAT-----GGTGGAGCTGTGT--------CCTCGTCTGTGGGGCTCGGAGCTGGGAGCTATGCTCGC---------------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851253 115 + 57149010 I a score=421313.000000 s hg38.chr20_KI270870v1_alt 96476 43 + 183433 TTCAC-------CG-GGTGCCATTCTGCTCTTTTGCCCAGAG-AAGCTCAGC s panTro5.chr20 66423293 43 + 66533130 TTTAC-------CG-GGTGCCATTCTGCTCTTTTGCCCAGAG-AAGCTCAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098438 43 + 62195757 TTTAC-------CG-GGTGCCATTCTGCTCTTTTGCCCAGAG-AAGCTCAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487783 43 - 578057 TTCAC-------CG-GGTGCCATTCTGCTCTTTTGCCCAGGG-AAGCTCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011905 43 - 110113093 TTCAC-------CA-GGTGCCATTCTGCTCTTTTGTCCAGAG-AAGCTCAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737246 42 - 92844088 TTCAC-------CA-GGTGCCATTCTGCTC-TTTGCCCAGAG-AAGCTCGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405247 43 + 96509753 TTCAC-------CA-GGTGCCATTCTGCTCTTTTGCCCAGAG-AAGCTCGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876270 43 - 16982598 TTCAC-------CA-GGTGCCATTCTGCTCTTTTGCCCAGAG-AAGCTCGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678145 43 - 3785965 TTCAC-------CA-GGTGCCATTCTGCTCTTTTGCCCAGAG-AAGCTCGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62740 43 - 179258 TTCAC-------CA-GGTGCCGTTCTGCTCTTTTGCCCAGAG-AAGCTCGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548235 43 - 5823884 TTCAC-------CA-GGTGCCATTCTGCTCTTTTGCCCAGAG-AAGCTCGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30836 43 + 372756 TTTAC-------CA-GGTGCCATTCTGCTCTTTTGCCCAGAT-AAGCTCAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268338 43 + 16356641 TTTAC-------CA-GGTGCCATTCCGCCCTTTTGCCCAGAT-AAGCTCAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137362 43 + 1231380 TTTAC-------CA-GGTGCTGTTCTGCTCTTTTGCCCAGAT-AGGCTCAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667439 43 + 11732439 TTTAC-------CA-GGTGCCATTCTGCTCTTTTGCCCAGAT-AAGCTCAGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56851368 43 + 57149010 TTCAC-------CA-GGTGCCGTTCTGCTCTCTCGCCCCGAG-ACACTCGGT i micMur3.chr18 I 115 C 0 s otoGar3.GL873542 22832126 48 + 22939663 CTCACCAGCACACA-GGAGCCAGTCTGCTCCCCTGCTC--AG-ACACTCAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181780098 31 + 182113224 --------------------TGTGTTTTGCTTTTGTTCTGAA-ATGCTTCAT i mm10.chr2 C 0 I 1 s canFam3.chr24 47593631 35 + 47698779 ATCAC-------TACGGTGCTGTTCAGCATCTTTGCCCAGAG---------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 231495 34 - 397369 TTTAG-------CG----------CTGCGCCGCCTCCCAGGGTGAGCTGAG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1843952 977 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=919417.000000 s hg38.chr20_KI270870v1_alt 96519 90 + 183433 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGTGGCTCTTTGGAGGAGCAGTTGATCCCCGGGATGCTAGTGCTCTGCCTGAGCAGATGTGGGGC s panTro5.chr20 66423336 90 + 66533130 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGTGGCTCTTTGGAGGAGCAGTTGATCCCCGGGATGCTAGTGCTTTGCCTGAGCAGATGTGGGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098481 90 + 62195757 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGTGGCTCTTTGGAGGAGCAGTTGATCCCCGGGATGCTAGTGCTTTGCCTGAGCAGATGTGGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487826 90 - 578057 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGTGGCTCTTTGGAGGAGCAGTTGATCCCCGGGATGCTAGTGCTTTGCCTGAGCAGATGTGGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110011948 89 - 110113093 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGGGGCTCTTTGGAGGAGCAGTTGAT-CCCGGGATGCTAGTGCTTTTCCTGAGCAGATGTGGGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737288 82 - 92844088 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGTGGCTCTTTGGAGCAGCAGTTGATCCCCGGGATCCTAGTGC--------AGTAGATGTGGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405290 82 + 96509753 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGTGGCTCTTTGGAGCAGCAGTTGATCCCCGGGATCCTAGTGC--------AGTAGATGTGGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876313 90 - 16982598 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGTGGCTCTTTGGAGCAGCAGTTGATCCCCGGGATCCTAGTGCTTTGCCTAAGTAGATGTGGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678188 90 - 3785965 GGCTTTGATGCCT----CAGGGAGGCAGG-AGTGGCTCTTGGGAGCAGCAGTTGATCCCCGGGATCCTAGTGCTTTGCCTAAGTAGATGTGGGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62783 90 - 179258 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGTGGCTCTTTGGAGCAGCAGCTGATCCCCGGGATCCTAGTGCTTTGCCTAAGTAGATGTGGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548278 90 - 5823884 GGCTTTGCTGCCT----CAGGGAGGCAGG-AGTGGCTCTTTGGAGCAGCGGTTGATCCCCGGGATCCTAGTGCTTTGCCTAAGTAGATGTGGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30879 89 + 372756 GGCTTTGCTGCTG----CAGGGAGGCAGG-GGTGGCTCTTTGGAGGAGCACAGGA-CCCCGTGACCCTAGTGCTTTGCCTGAGCAGGTATGgggc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268381 90 + 16356641 GGCTTTTCCGCTG----CAGGGAGGCAGG-AGTGGCTCTTCGGAGGAGCACAGGACCCCCGTGATCCTAGAGCTTTGCCAGAGCAGGCGTGGGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137405 90 + 1231380 GGCTTTGCTGCTG----CAGGGAGGCAGG-AGTGGCTCTTCGGAGGAGCACAGGACCCCCGTGATCCTAGTGCTTTACCTGAGCAGGTGTGGGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667482 89 + 11732439 GGCTTTGCTGCTG----CAGGGAGGCAGG-AGTGGCTCTTCGGAGGAGCGCAGGGCCCCCGTGACCCTAGTGCTTCGTTCGAGCAGGCAT-GGGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56851411 79 + 57149010 GGCTTTGATGCC-----TGCGGGAGCAGG-AGTGGCTCTTTGG-GGGGCAG---------ATGATCCCGGTGCTTTGCCTGAGCAGATGTGGGGC i micMur3.chr18 C 0 I 60 s proCoq1.NW_012150197v1 1844929 80 - 2029793 GGCTTTGCTGCC-----TGGGGGAGCAGG-AGTGGCTCTTTGGAGGGGCAG---------GTGATCCTGGTGCTTTGCCTGAGCAGATGTGGGGC i proCoq1.NW_012150197v1 I 977 I 59 s otoGar3.GL873542 22832174 85 + 22939663 GGCTTTGCTGCTTGTTGTGGTGGGGTGGA-AGTGGCTCTCTGGAGGGGCAC---------GTGATCCTAATACTTTGCCTGAGCAAATGAAGGAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181780130 87 + 182113224 GGCTTTGTTACTA----ATGTTAGATAAG-AGCCACACTTTAG-GGAGTAGATGAGTTT-AAGGTCTTGGTACTTTG-CTGTGCAGATGTGGTAT i mm10.chr2 I 1 C 0 s canFam3.chr24 47593666 46 + 47698779 ---------------------GAGGCAGG-AGCAGCTCTTTAGAGTTG------------GTGGTGCTGG-----------AGCAGAGGTT---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 231529 82 - 397369 ------GATGCTG----CTGGGTGCCGGGCAGCAGCTGCTGGGAGGTGCAGCA---CTTAGCGCTTCTCAGCCCCTGCCCGAGCAGACGTGGAGC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=485588.000000 s hg38.chr20_KI270870v1_alt 96609 73 + 183433 CTCAGGGCCTCAGGACTTCAGAGCCCAGGGCTGACTGACCTAGGGACAG-GAGTGTAAGGGATGTGGGCAACGA s panTro5.chr20 66423426 73 + 66533130 CTCAGGGCCTCAGGACTTCAGAGCCCAGGGCTGACTGACCTAGGGACAG-GAGTGTAAGGGATGTAGGCAATGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098571 73 + 62195757 CTCAGGGCCTCAGGACTTCAGAGCCCAGGGCTGACTGACCTAGGGACAG-GAGTGTAAGGGATGTGGGCAATGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487916 73 - 578057 CTCAGGGCCTCAGGACTTCAGAGCCCAGGGCTGACTGACCTAGGGACAG-GAGTGTAAGGGATGTGGGCAATGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012037 73 - 110113093 CTCAGGGCCTCAGGACTTCAGAGCGCAGGGCTGACTGACCTAGGCACAG-GAGTGTAAGGGATGTGGGCAATGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737370 71 - 92844088 CTCAGGG-GTCAGGACTTCAGAGCCCAGGGCTGACTGACCTAGGGACAG-GAGTATAAGCG-TGTGGGCAATGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405372 71 + 96509753 CTCAGGG-GTCAGGACTTCAGAGCCCAGGGCTGACTGACCTAGGGACAG-GAGTATAAGCG-TGTGGGCAATGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876403 71 - 16982598 CTCAGGG-GTCAGGACTTCAGAGCCCAGGGCTGACTGACCTAGGGACAG-GAGTATAAGCG-TGTGGGCAATGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678278 71 - 3785965 CTCAGGG-GTCAGGACTTCAGAGCCCAGGGCTGACTGACCTAGGGACAG-GAGTGTAAGCG-TGTGGGCAATGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62873 71 - 179258 CTCAGGG-GTCAGGACTTCAGAGCCCAGGGCTGACTGACCTAGGGACAG-GAGTGTAAGCG-TGTGGGCAATGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548368 71 - 5823884 CTCAGGG-GTCAGGACTTCAGAGCCCAGGGCTGACTGACCCAGGGACAG-GAGTGTAAGCC-TGTGGGCAACGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 30968 71 + 372756 ctcagggcctcagggcctcagACTCCAGGTCTGACTGACCTA-GGAT-G-GAGTGTCAGGGATGTGAGCAATGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268471 64 + 16356641 CTCAGGACTTCAGAG--------TCCACGTCTGACTGACCTAGGGAT-G-GAGTGTCAGGGATGTGAGCAATGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137495 71 + 1231380 CTCAGG-CCTCAGGACTTCAGAGTCCAGGTCTGACTGACCTAGGGAT-G-GAGTGTCAGGGATGTGAGCAATGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667571 72 + 11732439 CTCAGGGCCTCAGGACTTCAGAGTCCAGGTCTGACTGACCTAGGGAT-G-GAATGTCAGGGATGTGAGCAATGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22832259 44 + 22939663 --------ATCAGGGCTGCCAAGCCCCAAGTTG----------------------TGAGTGATGTGAGTGATGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181780217 44 + 182113224 --------CTCAGG--------------------TTGACTTA-AAACAT-TAGTTCTTGGGCTAAAGGTGGTGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47593712 46 + 47698779 CCGAAGGCTCCAGTGCTTTGCAG----GAGCTGAT--------------------GCAGGGCTACGGGCA---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 231611 62 - 397369 --------CCCAGGACTGGAGGGGCCAGAGCTG----CCCCAGGGCCAGCGGGCCCAGGGGAGGCGGGCAATGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1845009 59 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851490 60 + 57149010 I a score=11849.000000 s hg38.chr20_KI270870v1_alt 96682 1 + 183433 A s panTro5.chr20 66423499 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098644 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487989 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012110 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737441 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405443 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876474 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678349 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62944 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548439 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31039 1 + 372756 A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268535 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137566 1 + 1231380 A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667643 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1845068 1 - 2029793 A i proCoq1.NW_012150197v1 I 59 C 0 s otoGar3.GL873542 22832303 1 + 22939663 A i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181780261 1 + 182113224 A i mm10.chr2 C 0 C 0 e canFam3.chr24 47593758 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851490 60 + 57149010 I e dasNov3.JH569290 231673 0 - 397369 C a score=568898.000000 s hg38.chr20_KI270870v1_alt 96683 54 + 183433 GAATTCCACAGGG-------------------------C----TGTATTTCCAGACTCCCATGGGTGGGTGTGGGTGGAGAAG s panTro5.chr20 66423500 54 + 66533130 GAATTCCACAGGG-------------------------C----TGTATTTCCAGACTCCCATGGGTGGGTGTGGGTGGAGAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098645 54 + 62195757 GAATTCCACAGGG-------------------------C----TGTATTTCCAGACTCCCATGGGTGGGTGTGGGTGGAGAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 487990 54 - 578057 GAATTCCACAGGG-------------------------C----TGTATTTCCAGACTCCCATGGGTGGGTGTGGGTGGAGAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012111 79 - 110113093 GAATTCCACATGAATGTGGAATTCAAATGAAGAATCTTC----CGTATTTCCAGACTCCCACGGGTGAGTGTGGGTGGAGAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737442 52 - 92844088 GAATTC--CAGGG-------------------------C----TTTATTTCCAGACTCCCATGGGTGTGTGTGGGTGGAGAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405444 52 + 96509753 GAATTC--CAGGG-------------------------C----TTTATTTCCAGACTCCCATGGGTGTGTGTGGGTGGAGAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876475 52 - 16982598 GAATTC--CAGGG-------------------------C----TTTATTTCCAGACTCCCATGGGTGTGTGTGGGTGGAGAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678350 52 - 3785965 GAATTC--CAGGG-------------------------C----TTTATTTCCAGACTCCCATGGGTGTGTGTGGGTGGTGAAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62945 52 - 179258 GAATTC--CAGGG-------------------------C----ATTATTTCCAGACTCCCATGGGTGTGTGTGGGTGGTGAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548440 54 - 5823884 GAATTCCGCAGGG-------------------------C----TTTATTTCCAGACTCCCATGTGTGTGTGTGGGTGGAGAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31040 54 + 372756 GAGTTCCACAGGG-------------------------C----TTAATTTCCAGACCTTCATGGGTGGGTGTGGGTGGAGAAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268536 58 + 16356641 GAATTCCACAGGG-------------------------CTTTTTTTATTTCCAGACTCTCATGGGTGGGTGTGGGTGGAGAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137567 54 + 1231380 GAATTCCACAGGG-------------------------C----TTTATTTCCAGACTCTCATGGGTGGGTGTGGGTGGAGAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667644 54 + 11732439 GAATTCCACAGGG-------------------------C----TTTATGTCCAGACTCTCATGGGTGGGTGTGGGTGGAGAAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56851550 54 + 57149010 GAATTCCACAGGG-------------------------C----TTCGTTTCCAGACTCTCGGGGGTGGGTGGGTGTGGAGAAG i micMur3.chr18 I 60 I 274 s proCoq1.NW_012150197v1 1845069 53 - 2029793 GAATCCCACAGGG-------------------------C----TTCATTTCCAGACTC-CTAGGGTGGGTGAGCGTGGAAAAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22832304 52 + 22939663 AAATTCCAGGCGG-------------------------C----TTCATTTTCACACTCTCTGCAGTGGGTGG--GGGGCAAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181780262 52 + 182113224 GAGTCCCAAAGGG-------------------------C----TG-ATTTCCAAAATCTTAGGGATG-GTGAGGCAGTAGAAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47593758 43 + 47698779 ---TCCCAC-GGG-------------------------C----TCTCCTTCCAGACCCCC-CAGGCAGGTGAGAGTA------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 231673 45 - 397369 -----CCGCGGGC-------------------------G----CCACTTCCCAGGTGCCCAGGTGTGTGTGCAGGTGTG---- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=422247.000000 s hg38.chr20_KI270870v1_alt 96737 55 + 183433 CCCCAGTGAGC------------------------------------------------TGGTTATCTCCCACCAAACA--AAACTGGAGGTCCCTTTGCAGAGA s panTro5.chr20 66423554 55 + 66533130 CCCCAGTGAGC------------------------------------------------TGGTTATCTCCCACCAAACA--AAACTGGAGGTCCCTTTGCAGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098699 55 + 62195757 CCCCAGTGAGC------------------------------------------------TGGTTATCTCCCACCAAACA--AAACTGGAGGTCCCTTTGCAGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488044 55 - 578057 CCCCAGTGAGC------------------------------------------------TGGTTATCTCCCACCAAACA--AAACTGGAGGTCCCTTTGCAGAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012190 55 - 110113093 CCCCAGTGAGC------------------------------------------------TGGTTCTCTCCCACCAAACA--AAACTGGAGGTCCCTTTGCAGAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737494 54 - 92844088 -CCCAGTGAGC------------------------------------------------TGGTTATCTCCAATCCAACA--AAACTGGAGGTCCCTTTGCAGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405496 102 + 96509753 -CCCAGTGAGCTTCTCCACCCACACACTGGAGATAACTCCACTGGAGATAACTCCCCAGTGGTTATCTCCAATCCAACA--AAACTGGAGGTCCCTTTGCAGAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876527 54 - 16982598 -CCCAGTGAGC------------------------------------------------TGGTTATCTCCAATCAAACA--AAACTGGAGGTCCCTTTGCAGAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678402 55 - 3785965 CCCCAGTGAGC------------------------------------------------TGGTTATCTCCAATCAAACA--AAACTGGAGGTCCCTTTGCAGAGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 62997 55 - 179258 CCCCAGTGAGC------------------------------------------------TGGTTATCTCCAATCAAACA--AAACTGGAGGTCCCTTTGCGGAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548494 55 - 5823884 CCCCAGTGAGC------------------------------------------------TGGTTATCTCCAATTGAACA--AAACTGGAGGTCCCTTTGCAGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31094 50 + 372756 CCCCAGTGAGC------------------------------------------------TGGTTAGCTCCCATCAAACA-------AAACATCCCTTTGCAGAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268594 39 + 16356641 CCCCAGGGAGC------------------------------------------------GGG---GCTTCT---------------GGGGGTCCCTTTGCAGAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137621 45 + 1231380 CCCCAGTGAGC------------------------------------------------TGGTTCTCTCCCATCAAACA--AAACTGGAGGTCCC---------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667698 55 + 11732439 CCCCAGTGAGC------------------------------------------------CGGTTATCTCCCATCAAACA--AAACTGGAGGTCCCTTTGCAGAGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1845122 50 - 2029793 TCCCAGTGTTT-------------------------------------------------------ATCCCACCAAACAGAAAACTGGAGGTCCCTTTGCAGAGA i proCoq1.NW_012150197v1 C 0 I 119 s otoGar3.GL873542 22832356 50 + 22939663 TCCCAGCATTT-------------------------------------------------------CTCCCATCAGACAGAAAACTGGAGATCTCTTTGTGGGGA i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181780314 56 + 182113224 -TGCCATACAT------------------------------------------------TGCTTATCTCTCATCCCACAGAACACTAGAGGTTCCTTTTCAGATA i mm10.chr2 C 0 C 0 s canFam3.chr24 47593801 32 + 47698779 ------------------------------------------------------------------------TCACACAGAAAACCAGAGGCCCCTTCACAGAG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 231718 37 - 397369 ------------------------------------------------------------------CACTGGTGGAGCA--GTGGTGGGAACCGGAACGCTGAGA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851604 274 + 57149010 I a score=768952.000000 s hg38.chr20_KI270870v1_alt 96792 104 + 183433 CTCTTGCAGTTCATGTCCACAT------GACTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAGCGCAGAACTCAGGGGAGTCGCACTC------------GGGA-G--------AGGCAGCGTCTCCTCTGGAGCAC--------------------- s panTro5.chr20 66423609 104 + 66533130 CTCTTGCAGTTCATGTCCACAT------GACTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAGCGCAGAACTCAGGGGAGTCGCACTC------------GGGA-G--------AGGCAGCGTCTCCTCTGGAGCAC--------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098754 104 + 62195757 CTCTTGCAGTTCATGTCCACAT------GACTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAGCGCAGAACTCAGGGGAGTCGCACTC------------GGGA-G--------AGGCAACGTCTCCTCTGGAGCAC--------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488099 104 - 578057 CTCTTGCAGTTCATGTCCACGT------GACTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAGCGCAGAACTCAGGGGAGTCGCACTC------------GGGA-G--------AGGCAGCGTCTCCTCTGGAGCAC--------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012245 104 - 110113093 CTCTTGCAGTTCATGTCCACAT------GGCTTTGCTGAGAAGCA-GG---------------------------AGAGACTCAGAGCAGAACTCAGGGGAGTCGCACTC------------GGGA-G--------AGGCAGCGTCTCCTCTGGAGGGC--------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737548 102 - 92844088 CTCTTGCAGTTCATGTCCATGT------GGCTTCTCCGAGAAGCA-GG---------------------------AGAGACTCAGAGCGGAACTCAGGGGAGTCGTACTG------------GG---G--------AGGCAGCGTCTCCTCTGGAACAC--------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405598 102 + 96509753 CTCTTGCAGTTCATGTCCATGT------GGCTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAGAGCGGAACTCAGGGGAGTCGTACTG------------GG---G--------AGGCAGCGTCTCCTCTGGAACAC--------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876581 104 - 16982598 CTCTTGCAGTTCATGTCCATGT------GGCTTCTCTGAGAAGCG-GG---------------------------AGAGACTCAGAGCGGAACTCAGGGGAGTCGTACTG------------GGGA-G--------AGGCAGCGTCTCCTCTGGAACAC--------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678457 104 - 3785965 CTCTTGCAGTTCATGTCCATGC------GGCTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAGAGCGGAACTCAGGGGAGTCGTACTG------------GGGA-G--------AGGCAGCATCTCCTCTGGAACAC--------------------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63052 104 - 179258 CTCTTGCAGTTCATGTCCATGC------GGCTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAGAGCGGAACTCAGGGGAGTCATACTG------------GAGA-G--------AGGCAGCGTCTCCTCTGGAACAC--------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548549 103 - 5823884 CTCTTGCAGTTCATGTCCATGT------GGCTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAGAGCAGAACTC-GGGGAGTTGCACTG------------GGGA-G--------AGGCAGCGTCTTCTCTGGAACAC--------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31144 101 + 372756 CGTTTGCAGTTCATGCCCACCT------GGCTTCTCTGAGAAGCA-GG---------------------------AAAGACTCAAAGCAGAACTCAGGGGAGTCACCATC------------GGGA-G--------AGGCAGTGCCT---GTGGAGCAC--------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268633 100 + 16356641 TGTTTGCAGTTCAT-CCCACCT------AGCTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAAAGCAGAACTCAGGGGAGTCACCATC------------GGGA-G--------AGGCAGCGTCT---CTGGAGCAC--------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137666 96 + 1231380 --TTTGAAGTTCATGCCCACCT------GGCTTCTCTGAGAAGCA-GG---------------------------AGAGACTCAAAGCAGAACTCAGGGGAGTCACCGTT------------GGGA-G--------AGGCAGCGTCT------GAGCAC--------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667753 101 + 11732439 TGTTTGCAGTTCATGCCTACCT------GGCTTCTCGGAGAAGCA-GG---------------------------AGAGACTCAAAGCAGAACTCAGGGGAGTTGCCATC------------GGGA-G--------AGGCAGCGTCT---CTGGGGCCC--------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22832408 83 + 22939663 CTTTTGTAGCTCATACCTACTT------GGCGTCTATGA-----------------------------------------------GCAGAACTCAGCAGACTCGGAGTT------------GTGCTC--------AGGAAGCTTCT---CTGGAGTAT--------------------- i otoGar3.GL873542 I 2 I 11 s mm10.chr2 181780370 73 + 182113224 CATATGCATGACAAG--------------------CTAAGGAGCA-GA---------------------------AGAGACCCACAG------------GAGATGCCTTT------------AGGG-C--------AGGTAGCTTCT-----GGGACAC--------------------- i mm10.chr2 C 0 I 10 s canFam3.chr24 47593833 105 + 47698779 -----GCGGCTCACA-GCGCTT------GGCTTCCCTGGGAAGCGCAG---------------------------GGAGG---AGAGCAGGA---AGGGCCTGTGCACCCTGCTGGGTGTGAGGAC-G--------GGACAGTCCCGCTCCTGCCAGAT--------------------- i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 231755 157 - 397369 -------AGCCTGTGCCCACCTCTGCCAGGCTGCTCTGT-AAGCA-GGGCTGAGGTGGGTGGGTCTGAGGCAGAAAGAGCCCCGGAGCCGTGCGT-GGGGATCCAGTCCC------------GGGC-GCGGCGAGCAGGAGGCACTTCTCCAGAGGTGCCTGGTTGGGGTGGCAGGGGGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1845172 119 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851604 274 + 57149010 I a score=1049698.000000 s hg38.chr20_KI270870v1_alt 96896 110 + 183433 ACAGACCT-------TATGTCCTTCCCTCCAGCTGTCAGCCAGACATGCCCCAGTTGTCTTGCATATATACATATG-TAATGGTAACAAGGAATTCTGCTTGAGCCTTGCCAATCAGC s panTro5.chr20 66423713 110 + 66533130 ACAGACCT-------TACGTCCTTCCCTCCAGCTGTCAGCCAGACATGCCCCAGTTGTCTTGCATATTTACATATG-TAATGGTAACAAGGAATTCTGCTTGAGCCTTGCCAATCAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098858 110 + 62195757 ACAGACCT-------TACGTCCTTCCCTCCAGCTGTCAGCCAGACATGCCCCAGTTGTCTTGCATATTTACATATG-TAATGGTAACAAGGAATTCTGCTTGAGCCTTGCCAATCAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488203 110 - 578057 ACAGACCT-------TATGTCCTTCCCTCCAGCTGTCAGCCAGACATGCCCCAGTTGTCTTGCATATTTACATATG-TAATGGTAACAAGGAATTCTGCTTGAGCCTTGCCAATCAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012349 110 - 110113093 ACAGACCT-------TATGTCCTTCGCTCCAGCTGTCAGCCAGACATGCCCCAGTTGTCGTGCATATTTACATATG-TAACGGTAACGAGAAATTCTGCTTGAGCCTTACCAATCAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737650 104 - 92844088 ACAGACCT-------TGTGTCCTTCCCTCCAGCTGTCAGCCAGACGGGCCCCGGTTGTCTT-CATGTTTACATACG-TAACGGTAACAAGAAATTCTGCTTGA-----GCCAATCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405700 104 + 96509753 ACAGACCT-------TGTGTCCTTCCCTCCAGCTGTCAGCCAGACGGGCCCCGGTTGTCTT-CATGTTTACATACG-TAACGGTAACAAGAAATTCTGCTTGA-----GCCAATCAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876685 105 - 16982598 ACAGACCT-------TGTGTCCTTCCCTCCAGCTGTCAGCCAGACGGGCCCCGGTTGTCTTGCATGTTTACATACG-TAACGGTAACAAGAAATTCTGCTTGA-----GCCAATCAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678561 104 - 3785965 ACAGACCT-------TGTGTCCTTCCCTCCAGCTGTCAGCCAGAC-GGCCCCGGTTGTCTTGCATATTTACATACG-AAACGGTAACAAGAAATTCTGCTTGA-----GCCAGTCAGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63156 109 - 179258 ACAGACCT-------TGTGTCCTTCCCTCCAGCTGTCAGCCAGAC-GGCCCCGGTTGTCTTGCATATTTACATACG-TAACGGTAACAAGAAATTCTGCTTGAGCCTTGCCAATCAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548652 110 - 5823884 ACAGACC--------TGTGTCCTTCCCTCCAGCTGTCAGCCAGACGGGCCCCAGTTGTCTTGGATATTTACATACGTTAACGGTAACAAGAAATTCTGCTTGAGCCTTGCCAATCAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31245 110 + 372756 CCAGACCT-------TATGCCCTTTCCTCCAACTGTCAGTCAGACATGCCCCAGTTGTCTTGCGTATTTACATATG-TAACCCTAACAAGAAATTCTGCTTGAGCCTTGCCAGTCAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268733 98 + 16356641 CCAGACC--------TATGCCCTTCCCTCCAGCTGTCAGTCGGACATGC-----------TGCATATTTACGTATG-TGACCCTAACAGGAAATTCTGCTTGAGCCTTGCCAGTCAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137762 97 + 1231380 CCAGACC--------TATGCCCTT-CCTCCAGCTGTCAGTCAGACATGT-----------TGCATATTTACATATG-TGACCCTAACAGGAAATTCTGCTTGAGCCTTGCCAGTCAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667854 110 + 11732439 CCAGACCT-------GACGCCCTTTCCTCCGGCTGTCAGTCAGACATGCCCCCGCTGTCTTGCATATTTACATGTG-TAACCCTAACGAGAAATTCTGCTTGAGCCTTGCCAGTCAGC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1845291 110 - 2029793 ACAGACCT-------TGCGTCCGTTCCTCCAGCTGTCAGCAAGACGTGCCCCAGTCACCTTGCGTATTTGCACACG-TAACCGCAACGAGAAATTCCGCTTGCGTCTTGCAGATCGAC i proCoq1.NW_012150197v1 I 119 C 0 s otoGar3.GL873542 22832502 87 + 22939663 GCAAGACC-------TGTATCCTTCCCTTCAGCTATCGT--GGACGTGCTCCAGGTGCCCTGC----------------------ACAGGAAGTTCTGCTAGAGTCTTGCAAATCAGC i otoGar3.GL873542 I 11 C 0 s mm10.chr2 181780453 108 + 182113224 TTAGAC---------TAAGTACTGTCCTTCAGTTGTCATTGAGCTATGCTCCAGTCACCTCACATGTTTGTATATG-ACCCTATAACAAATAATTCTGATTGAGCCTCATGAACCAGT i mm10.chr2 I 10 C 0 s canFam3.chr24 47593941 105 + 47698779 --AGGGGC-------TCCGTGCTCCCCTCCAGCTGTCAGGGGGACGTACTCCAGTTCCCTCGTGTGTTCACGTTCA-TTGCCGTGACAG---ACGCGGCCTGGGCCTTGCGGATCCGC i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 231912 105 - 397369 ACAATCCTGCCGGCCAGTGAACTTCCTCCCAGCTGTCAGCGCAGCCCGCTCCAGTTGCCTCGCATATCTACACCCG-TCACCCTAACCAG-AATTCCACTCAAGCCT----------- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851604 274 + 57149010 I a score=1122512.000000 s hg38.chr20_KI270870v1_alt 97006 96 + 183433 CCAGTGAGCAGGTTTCTGCAGCATCTTGTCTCCTGGGATAGATACTCAGAAAGTGAACCCTGTGCACTTTGGGGCC-----T--TGTCTCTCAGCTTC-TGTTG s panTro5.chr20 66423823 96 + 66533130 CCAGTGAGCAGGTTTCTGCAGCATCTTGTCTCCTGGGATAGATACTCAGAAAGTGAGCCCTGTGCACTTTGGGGCC-----T--TGTCTCTCAGCTTC-TGTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62098968 96 + 62195757 CCAGTGAGCAGGTTTCTGCAGCATCTTGTCTCCTGGGATAGATACTCAGAAAGTGAGCCCTGTGCACTTTGGGGCC-----T--TGTCTCTCAGCTTC-TGTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488313 95 - 578057 CCAGTGAGCAGGTTTCTGCAGCATCTTGTCTCCTGGGATAGATACTCAGAAAGTGAGCCCTGTGCACTTTGGGG-C-----T--TGTCTCTCAGCTTC-TGTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012459 96 - 110113093 CCAGTGAGCAGGTTTCTGCAGCATCTTGTCTCCTGGGGTAGATACTGAGAAAGTGAGTCCTGTGCACTTTGGGGCC-----T--TGTCTCTCAGCTTC-TGTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737754 96 - 92844088 CCAGTGAGCAGGTTTCTGCAGCGTCTTGTCTCCTGGGACAGATACTTGGAAAGTGAGCCCTGTGCACTTCGGGGCC-----T--TGTCTCTCAGCTTT-TGTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405804 96 + 96509753 CCAGTGAGCAGGTTTCTGCAGCGTCTTGTCTCCTGGGACAGATACTTGGAAAGTGAGCCCTGTGCACTTCGGGGCC-----T--TGTCTCTCAGCTTT-TGTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876790 96 - 16982598 CCAGTGAGCAGGTTTCTGCAGCGTCTTGTCTCCTGGGACAGATACTTGGAAAGTGAGCCCTGTGCACTTCGGGGCC-----T--TGTCTCTCAGCTTT-TGTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678665 96 - 3785965 CCAGTGAGCAGGTTTCTGCAGCGTCTTGTCTCCTGGGACAGATACTTGGAAAGTGAGCCCTGTGCACTTCGGGGCC-----T--TGTCTCTCAGCTTC-TGTTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63265 96 - 179258 CCAGTGAGCAGGTTTCTGCAGCATCTTGTCTCCTGGGACAGATACTTGGAAAGTGAGCCCTGTGCACTTCGGGGCC-----T--TGTCTCTCAGCTTC-TGTTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548762 96 - 5823884 CCAGTAAGCAGGTTTCTGCGGCATCTTGTCTCCTGGGATAGATACTCAGAAAGTGAGCCCTGTGCACTTTGGGGCC-----T--TATCTCTCAGCTTC-TGTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31355 96 + 372756 CCAGTGAGCAGGTTCCCGCAGCATCTTGTCTCCTGGGACAGATACTCAGAAAGCGAGCCCTGTGCACTCTGGGGCT-----T--TGCCTCTCGCCTTC-TGTTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268831 96 + 16356641 CCAGTGAGCAGATTCCCGCAGCATCTCATCTCCTGGGACAGATGCTCAGAAAGCGAGCCCTGTGCACTCTGGggcc-----t--tgcctctcaccgtc-tgttg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137859 96 + 1231380 CCAGTGAGCAGGTTCTTGCAGCGTCTTGTCTCCTGGGACAGACACTCAGAGAGTGAGCCCTGTGTGCTCTGGGGCC-----T--TGCCTCTCACTTTC-TGTTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2667964 84 + 11732439 CCAGTGAGCCGGTTCCCGCAGCATCTTCTCTCCTGGGACAGATACTCAGAAAGCGAGCCCTGTGGACTCTGGGGCC-----T--TGCCTCT------------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56851878 99 + 57149010 CCAGTGTGTAGGTTCCTGTAGCATCTTCTCTCCTGGGATGGATGCTCAGAAAGTGAGCCCTGTGCACTTGGGTGCC--CGGC--TGTCTCTCAGCTTC-TGTTG i micMur3.chr18 I 274 I 454 s proCoq1.NW_012150197v1 1845401 97 - 2029793 CCAGGGTGGAGGTTTCTGTAGCATCTTCTCTCCTGGGATGGATGCTCGGAAAGCGAGCCCTGTGCACGTTGGCGCC--CGGT--TG--TCTCAGCTTC-TGTTG i proCoq1.NW_012150197v1 C 0 I 443 s otoGar3.GL873542 22832589 89 + 22939663 CCAGTGTATAGGTTTATG-----TCTGCTGTCCTGTG-TGGATACTCAGAAATTGAGTCCTGTGCCCTAGGGGACC--------TGTCTCTCAGCTTC-CACTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181780561 96 + 182113224 -CAGTACACAGGCTTCTATAGCATGTTCT---CTGGGACATATATTCAGAATCAGAACCCTGAGCCTTTCAGGGTC--CAGT--TGTCTCCCAGTTCCTTAATG i mm10.chr2 C 0 C 0 s canFam3.chr24 47594046 97 + 47698779 GCTGCGTGTGGGATG-TGCAAGGTCTCCTCTCCCGGGAGCTGTGTGTAGAAAGTGCCCCCCATGTACTTTGTGGCC-----TGGGGCCTCCCAGCTTC-TACTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 232017 73 - 397369 --------CAGCTTTCTGCAGCGTCT------CCAGGACCTACGTGCAAAAAGTG--------GCGTGGCAGGGCCACACAA--TAGCTTCCACCTG------- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=672157.000000 s hg38.chr20_KI270870v1_alt 97102 132 + 183433 ACA-CATAAGAAA--------AGAGACACACAGAGGAC-CCCAC---------GCCCCATCTTCAAAGTGTGAAGCACACTCCCCGGCTGATACGATTCTTGTCGATTCACTTACGGAATCTTCCA---A-TATGCTTTTC---------------------------------------------------------------------------------C-------TCCCTATACCCCA- s panTro5.chr20 66423919 132 + 66533130 ACA-CATAAGAAA--------AGAGACACACAGAGGAC-CCCAC---------GCCCCATCTTCAAAGTGTGAAGCACACTCCCCGGCTGATACGATTCTTGTCGGTTCACTTACGGAATCTTCCA---A-TATGCTTTTC---------------------------------------------------------------------------------C-------TCCCTACACCCCA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099064 132 + 62195757 ACA-CATAAGAAA--------AGAGACACACAGAGGAC-CCCAC---------GCCCCATCTTCAAAGTGTGAAGCACACTCCCCGGCTGATACGATTCTTGTCGGTTCACTTACGGAATCTTCCA---A-TATGCTTTTC---------------------------------------------------------------------------------C-------TCCCTACACCCCA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488408 132 - 578057 ACA-CATAAGAAA--------AGAGACACACAGAGGAC-CCCAC---------GCCCCATCTTCAAAGTGTGAAGCACACTCCCCGGCTGATACGATTCTTGTCGGTTCACTTACGGAATCTTCCA---A-TATGCTTTTC---------------------------------------------------------------------------------C-------TCCCTATACCCCA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012555 132 - 110113093 TCA-CATAAAAAA--------AGAGACACACAGAGGAC-CGCAT---------GCCCCATCTTCAAAGTGTGAAGCACACTCCCCAGCTGATATGATTCTTGTCGGTTCACTTATGGAATCTTCTA---A-TATGTTTTTC---------------------------------------------------------------------------------C-------TCCCTATACGCCA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737850 119 - 92844088 TCACCATAAAAAA--------AGAG--ACACGGAGAAC-CCCAT---------GCCCCATCTTCAAAGTGTGAAGCACTCTCCCC-GCTGGCATGATTCTTGTTGGTTCACTGACGG---------------GTGTTTTTC---------------------------------------------------------------------------------C-------TCCCGATACCCCA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96405900 119 + 96509753 TCACCATAAAAAA--------AGAG--ACACGGAGAAC-CCCAT---------GCCCCATCTTCAAAGTGTGAAGCACTCTCCCC-GCTGGCATGATTCTTGTTGGTTCACTGACGG---------------GTGTTTTTC---------------------------------------------------------------------------------C-------TCCCGATACCCCA- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16876886 119 - 16982598 TCACCATAAAAAA--------AGAG--ACACGGAGAAC-CCCAT---------GCCCCGTCTTCAAAGTGTGAAGCACTCTCCCC-GCTGGCATGATTCTTGTTGGTTCACTGACGG---------------GTGTTTTTC---------------------------------------------------------------------------------C-------TCCCGATACCCCA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678761 132 - 3785965 TCACCATAAAAAAAG------AGAG--ACACGGAGAAC-CCCAT---------GCCCCATCTTCAAAGTGTGAAGCACTCTCCCC-GCTGGCATGATTCTTGTTGGTTCACTGACGGAATCTTCCA---A-CGTGTTTTTC---------------------------------------------------------------------------------C-------TCCCGATACCCCA- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63361 130 - 179258 TCACCATAAAAAA--------AGAG--ACACGGAGAAC-CCCAT---------GCCCCATCTTCAAAGTGTGAAGCACTCTCCCC-GCTGGCATGATTCTTGTTGGTTCACTGACGGAATCTTCCA---A-CGTGTTTTTC---------------------------------------------------------------------------------C-------TCCCGATACCCCA- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548858 133 - 5823884 TCACCATAAAAAA--------AGAGACACACGGAGAAC-CCCAT---------GCCCCATCTTCAAAGTGTGAAGCACTCTCCCCGGCTGGCATGATTCCTGTTGGTTCACTTACGGAATCTTCCA---A-TGTGTTTTTC---------------------------------------------------------------------------------C-------TCCCGATACCCCA- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31451 130 + 372756 TGACCAC---ACA--------AGAGCCACCCAGAGAAC-CCCAC---------GCCCTGTCTTCAAAGTGTGAGGCATCCTCCCTGGCTGGGGGAATTATTCTTTGTTCAGGTGCGGAATCTTCTG---G-TACATTTTGC---------------------------------------------------------------------------------C-------TCCCTATGCCCTG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16268927 130 + 16356641 tgaccat---gaa--------agagccacccagagaac-cccat---------gcctcatcttcaaagtgtgaggcctcctccctggctggcagaattattgtTTGTTCACGTACGGAATCTTCCA---G-TTTGTTCTGC---------------------------------------------------------------------------------C-------TCCCTCTGCCCTG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1137955 130 + 1231380 TGACCAT---AAA--------AGAGCCACCCAGAGAAC-CCCAT---------GCCCCGTCTTCAAAGTGTGAGGCATCCTCCCTGGCTGGCAGAATTACTGTTTGTTCACGTACGGAATCTTCCA---G-GATGTTTTGC---------------------------------------------------------------------------------C-------TCCCTATGCCCTG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668048 100 + 11732439 ------------------------------------------AT---------GCCCCGTCTTCTAAGCGTGAGGCACCCTCCCTGGCTGGCAGAATTATTGTTTGTTCACATACGGAATCTTCCA---G-TATGTTTTGC---------------------------------------------------------------------------------C-------TCCCTATGCCCTG- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22832678 104 + 22939663 TCACCAC---AGA--------GGATACAT---GAAGTC-CCCAT---------CTTCTGTCATC-AGGCAGGAAGCTCCATGACCAGC----------------------CCTTCCCAGCCTTCCA---A-CGTGCTTATC---------------------------------------------------------------------------------C-------TCCTTGTCCTCCA- i otoGar3.GL873542 C 0 I 103 s mm10.chr2 181780657 130 + 182113224 --------------GTACAGTGGAGACACATGATAACC-CTTAT---------ATGCCAGTTCC----CATAAAGAGTACCTAATGGCTGGCACAATTCTTGACTGTTCACTTATGACACCTTCCAAGTA-TGTATTCTTC---------------------------------------------------------------------------------CCAATGGTTTCTTCTGCA---- i mm10.chr2 C 0 I 2 s canFam3.chr24 47594143 103 + 47698779 ----------------TCACCAGAGTTGCAAGGGGATCTCCCAT---------CCCCCGTC----AAGTGTGTGACA--------------GGTGATCCTTGCTGACGCACCTCCTGAATTTCCTC---------CCTTCC---------------------------------------------------------------------------------A-------TCCCCCTGGGCTG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 232090 206 - 397369 ---CCACCTTCAA--------GGAGAAGCAAAGAAAGC-TCAACTGTTACTGGTCACCGTTTTCAAAGT---------------TGACTAGAATGATTCCTGCTTACT-GCTTCCAGAATCTTCCA---AGCATGCTTTCCTCTCCCTCCCCAGGGAACGAGGCTCTCTGCTCCCTCCCCTGTCTCCCGTATGTTGCTTTTACATCCTTTCTGGGGGCTCAGC-------TCCCAGCACCTCCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1845498 443 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851977 454 + 57149010 I a score=1676637.000000 s hg38.chr20_KI270870v1_alt 97234 226 + 183433 CATCCCT-GTCACAGA-----------GTTGAGAATTGGATTACCTGGTG-G----------------GCA-GGTGGGCCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------CGCTCACACCGGC------------TCAGTGCAGATGACCAGTGGC----------AGAT-GGGAACCCAGGAGGC--CTAGAGATCTT--GGGTGATAGGGAAGCTCCCGCAGCTCCCTCCTCACTAGTCCAGGCACCGGAGCCTGCGGTGGGAGCCCT-GTCATCTCAGCGACGGCCT-GCGGGTGACTTA s panTro5.chr20 66424051 226 + 66533130 CATCCCT-GTCACAGA-----------GTTGAGAATTGGATTACCTGGTG-G----------------GCA-GGTGGGCCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------CGCTCACACCGGC------------TCAGTGCAGATGACCAGTGGC----------AGAT-GGGAACCCAGGAGGC--CTAGAGATCTT--GGGTGATAGGGAAGCTCCCGCAGCTCCCTCCTCACTAGTCCAGGCACCGGAGCGTGCGGTGGGAGCCCT-GTCATCTCAGTGACGGCCT-GAGGGTGACTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099196 226 + 62195757 CATCCCT-GTCACAGA-----------GTTGAGAATTGGATTACCTGGTG-G----------------GCA-GGTGGGCCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------CGCTCACACCGGC------------TCAGTGCAGATGACCAGTGGC----------AGAT-GGGAACCCAGGAGGC--CTAGAGATCTT--GGGTGATAGGGAAGCTCCCGCAGCTCCCTCCTCACTAGTCCAGGCACCGGAGCGTGCGGTGGGAGCCCT-GTCATCTCAGTGACGGCCT-GAGGGTGACTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488540 227 - 578057 CATCCCT-GTCACAGA-----------GTTGAGAATTGGATTGCCTGGTG-G----------------GCAGGGTGGGCCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------CGCTCAGACTGGC------------TCAGTGCAGATGACCAGTGGC----------AGAT-GGGAACCCAGGAGGC--CTAGAGATCTT--GGGTGATAGGGAAGCTCCCGCAGCTCCCTCCTCACTAGTCCAGGCACCGGAGCATGCGGTGGGAGCCCT-GTCATCTCAGCGACGGCCT-GCGGGTGACTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012687 227 - 110113093 CATCCCT-GTCATAGA-----------GTTGAGAATTGGATTACCTGGTG-G----------------GCAGGCTGGGCCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACACTGGC------------TCAGTGCAGATGACCAGTGGC----------AGAT-GGGAACCCAGGGGAC--CTAGAGATCTT--GGGTTATGGGGAAACTCCCGCAGCTCCCTCCTCACTAGTCCAGGCACCGGAGCATGCGGTGGGAGCCCT-GTCATCTCAGCGATGGCCT-GCGGGTGACTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92737969 216 - 92844088 CATCCCT-GTCACAGA-----------GTTGAGAACTGGATTACCCGGTG-G----------------GCAGGCTGGGTCCCAGTT--------------------------------------------------------------------------------TGAGGC---------------------------------------------------------------------------ACCTCACACTGGC------------TCAGTGCAGATGACCAGTGGC----------AGAT--GGAACCCAGGGGGC--CTAGAGGTCTT--GGGCTATGGGGAAACTCCCGCGGCTCCCTCCTCACTAGTCCAGGCACCGGAGCATGCGGTGGGAGCCCT-GTCATCTCAGCGAC-----------TGACTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406019 216 + 96509753 CATCCCT-GTCACAGA-----------GTTGAGAACTGGATTACCTGGTG-G----------------GCAGGCTGGGTCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACACTGGC------------TCGGTGCAGATGACCAGTGGC----------AGAT--GGAACCCAGGGGGC--CTAGAGGTCTT--GGGCTATGGGGAAACTCCCGCGGCTCCCTCCTCACTAGTCCAGGCACCGGAGCATGCGGTGGGAGCCCT-GTCATCTCAGCGAC-----------TGACTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877005 216 - 16982598 CATCCCT-GTCACAGA-----------GTTGAGAACTGGATTACCTGGTG-G----------------GCAGGCTGGGTCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACACTGGC------------TCAGTGCAGATGACCAGTGGC----------AGAT--GGAACCCAGGGGGC--CTAGAGGTCTT--GGGCTATGGGGAAACTCCCGCGGCTCCCTCCTCACTAGTCCAGGCACCGGAGCATGCGGTGGGAGCCCT-GTCATCTCAGCGAC-----------TGACTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3678893 217 - 3785965 CATCCCTGGTCACAGA-----------GTTGAGAACTGGATTACCTGGTG-G----------------GCAGGCTGGGTCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACACTGGC------------TCAGTGCAGATGACCAGTGGC----------AGAT--GGAACCCAGGGGGC--CTAGAGGTCTT--GGGCTATGGGGAAACTCCCACAGCTCCCTCCTCACTAGTCCAGGCACCGGAGCGTGCGGTGGAAGCCCT-GTCATCTCAGCGAC-----------TGACTTA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63491 216 - 179258 CATCCCT-GTCACAGA-----------GTTGAGAACTGGATTACGTGGTG-G----------------GCAGGCTGGGTCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACACTGGC------------TCAGTGCAGATGACCAGTGGC----------AGAT--GGAACCCAGGGGGC--CTAGAGGTCTT--GGGCTATGGGGAAACTCCCGCAGCTCCCTCCTCACTAGTCCAGGCACCGGAGCGTGCGGTGGGAGCCCT-GTCATCTCAGCGAC-----------TGACTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5548991 215 - 5823884 CATCCCT-CTCACAGA-----------GTTGAGAACTGGATTACCTGGTG-G----------------GCAGGCTGGGTCCCAGTT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACACTGGC------------TCAGTGCAGATGGCCAGTGGC----------AGAT--GGAACCC-GGGGGC--CTAGAGGTCTT--GGGTTATGGGGAAACTCCCGCAGCTCCCTCCTCACTGGTCCAGGCACCGGAGCATGCAGTGGGAGCCCT-GTCGTCTCAGGGAC-----------TGACTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31581 212 + 372756 CATCCCT-GTCATAGA-----------GTTGAGAATTTGGTTACCTGGTG-G----------------GCAGGCTGGGCCCTC-TC--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACACTGGC------------TCAGTGCAGATG-------------------------GGAACCCAAGGGGC--CTCGAGATCTG--GGGTTATGGGGAGACCCCCGCAGCTCACTCCTCACTAGTCCAGGCACCGGTGCCTGTGGTGGGAGCCCT-GTCATCTCAGCGATGGCCT-GTGATTTTGTTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269057 212 + 16356641 CATCCCT-GTCATAGA-----------GTTGAGAATCTGGTTACCTGGTG-G----------------GCAGGCTGGGCCCTC-TC--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACGCTGGC------------TCGGTGCAGATG-------------------------GGAACCCAAGGGGC--CTTGAGATCTG--GGGTTATGGGAAGAGCCCCACAGCTCACTCCTCACTAGTCCAGGCACCGCTGCATGCGGTGGGAGCCCT-GTCATCTCAGCGATGCCCT-GTGATTTTGTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138085 212 + 1231380 CATCCCT-GTCATAGA-----------GTTAAGAATTTGGTTACCTGGTG-G----------------GCAGGCTGGGCCCTC-TC--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACGCTGGC------------TCAGTGCAGATG-------------------------AGAACCCAAGGGGC--CTCGAGATCTG--GGGTTATGGGGAAACCCCCGCAGCTCGCTCCTCACTGGTCCAGGCACCGGTGTGTGCGGTGGGAGCCCT-GTCATCTCAGCGATGGCCT-GCAATTTTGTTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668148 212 + 11732439 CATCCCT-GTCGTAGA-----------GTTGAGAATTCGGTTACCTGGTG-G----------------GCAGGCTGGGCCCTC-TC--------------------------------------------------------------------------------AGGGGC---------------------------------------------------------------------------ACCTCACACTGGC------------TCAGTGCAGATG-------------------------GGAACCCAAGGGGC--CTCGAGATCTG--GGGTTATGGGGAGACCCCCGCAGCTCACGCCTCACTAGTCCTGGCACCGGTGCCTGCGGTCGGAGCCCT-GTCATCTCAGCGACGGCCT-GTGATTTTGTTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22832885 224 + 22939663 TATCCCT-GCCATAGG-----------GTTAAGGATCTGGTTACCTAATG-G----------------GCAGGGT-TGTCCTGTGT--------------------------------------------------------------------------------AGAGGC---------------------------------------------------------------------------ACCTCACTCTGGC------------TCAGTGCTGACGACCAGTGAC----------AGAT--GGGACCCAGAGGGC--CCAAATGTCTT--GGGTTGTGGGGAAAAACCCACAGTCCATGTCTCACTAGTCAAAG--TTGGAGCATGTGCTTAAAGCCCT-GTTATTACAGCAGGGCTATGGTTGGTGACTCT i otoGar3.GL873542 I 103 C 0 s mm10.chr2 181780789 385 + 182113224 GATCCCT-TTCTTAGATATCTTATGTTGTTGGTGGC--AGTTGCCTAGTG-GTTCTTTTGGTACATAAGCA--CTAGGTTACAGTTCCTGCTATAAGACTCAAGGATGGATatagatagatagatagatagatagatagatagatagatagatagatgagagagagagagacagacagaCATAGAGATGATATATATATTATATATAGAGAGATGTAGATTATATAGATATATCTGTGGGAAAGCATACCTGATACCTGC------------TCAATAATGACGACCATTAACTTCCCTCTATAGAT--GAGACCCA-----------GAGACCTT--GAATTGTGAGAAAAGTCCTACACCTCATCCCTTTTTGGTCAA-----------ATGAAGCTGATCCTCA-GTATTTCCAT----------ATAGGGAACTCA i mm10.chr2 I 2 C 0 s canFam3.chr24 47594246 213 + 47698779 CTTCCTC-GTC-CAGC-----------CTCG----------TGCCATTTGCA----------------GCATTCTCCTTGTTAGTTCAG-----------------------------------------------------------------------------GGCGAT---------------------------------------------------------------------------CCCTCACATTCGCAGTGGAGGTTGGGGAATGTGAATACCCGCTGGG----------TGGC-CTGGCCCCATGTGACTGCTGGGCACCTTCCTGGCTCCAGGAAGAGACACAGGGCTCACACTTCCCTGGC----------------------GGAGGCTG-GTCCTCACAGGGTC-CCCT-GAAGGTGACCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 232296 220 - 397369 TGTTCCT-GCCACTGG-----------TTTGGGAATTTGATCACTTGGTG-G----------------ACA-GCCTGTCCTCACGT--------------------------------------------------------------------------------AGAAGC---------------------------------------------------------------------------AGCTCCCACCTGC------------TTGGTGCTGGCGGTGATGAACCCCATTTTACAGATGGGGGCCCCCAAAGGG--CCAGAGACCTT--GGGTTCTTGGGAAGTTGCC-CCGCTTCCTCCTCA-----------------GGGAGAAGTCGAAGCCCTAGTCCTCTCAGGGCTCTCCT-GCAGCTGGTTCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1845498 443 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56851977 454 + 57149010 I a score=125281.000000 s hg38.chr20_KI270870v1_alt 97460 11 + 183433 CAGCTCAATGA s panTro5.chr20 66424277 11 + 66533130 CGGCTCAATGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099422 11 + 62195757 CAGCTCAATGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488767 11 - 578057 CAGCTCAATGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012914 11 - 110113093 CAGCTCAATGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738185 11 - 92844088 CAGCTCAGTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406235 11 + 96509753 CAGCTCAGTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877221 11 - 16982598 CAGCTCAGTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679110 11 - 3785965 CAGCTCAGTGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63707 11 - 179258 CAGCTCAGTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549206 11 - 5823884 CAGCTCCATGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31793 11 + 372756 CAGCTCAATGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269269 11 + 16356641 CAGCTCAATGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138297 11 + 1231380 CAGCTCAATTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668360 11 + 11732439 CAGCTCAATGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56852431 11 + 57149010 CAGCTCAATGA i micMur3.chr18 I 454 I 1 s otoGar3.GL873542 22833109 4 + 22939663 TAGC------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181781174 11 + 182113224 CAGTTCAAAGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47594459 11 + 47698779 TAGCTCAGTGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 232516 10 - 397369 CAGC-AAACGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1845498 443 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=68786.000000 s hg38.chr20_KI270870v1_alt 97471 4 + 183433 GGGG s panTro5.chr20 66424288 4 + 66533130 GGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099433 4 + 62195757 GGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488778 4 - 578057 GGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012925 4 - 110113093 GGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738196 4 - 92844088 GGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406246 4 + 96509753 GGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877232 4 - 16982598 GGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679121 4 - 3785965 GGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63718 4 - 179258 GGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549217 4 - 5823884 GGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31804 4 + 372756 GGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269280 4 + 16356641 GGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138308 4 + 1231380 GGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668371 4 + 11732439 GGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56852443 4 + 57149010 GGGG i micMur3.chr18 I 1 C 0 s proCoq1.NW_012150197v1 1845941 4 - 2029793 GGGG i proCoq1.NW_012150197v1 I 443 C 0 s mm10.chr2 181781185 4 + 182113224 GAAG i mm10.chr2 C 0 I 62 s canFam3.chr24 47594470 4 + 47698779 GAGG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 232526 4 - 397369 GGGG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e otoGar3.GL873542 22833113 0 + 22939663 C a score=529688.000000 s hg38.chr20_KI270870v1_alt 97475 51 + 183433 AGGCACAGAGTAGGTGCACACAGTAGGTGCCGAATCTGAGTGGTTTTATTC s panTro5.chr20 66424292 51 + 66533130 AGGCACAGAGTAGGTGCACACAGTAGGTGCCGAATCTGAGTGGTTTTATTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099437 51 + 62195757 AGGCACAGAGTAGGTGCACACAGTAGGTGCCGAATCTGAGTGGTTTTATTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488782 51 - 578057 AGGCACAGAGTAGGTGCACACGGTAGGTGCCGAATCTGAGTGGTTTTATTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012929 51 - 110113093 AGGCACAGAGTAGGTGCACACAGTAGGTGCCGAATCTGAGTGGTTTTATTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738200 46 - 92844088 AGGCACAGAGTAGATGCACGGAGAAGGTGCCGAATCTGAGTGGTTT----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406250 46 + 96509753 AGGCACAGAGTAGGTGCACGGAGAAGGTGCCGAATCTGAGTGGTTT----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877236 46 - 16982598 AGGCACAGAGTAGGTGCACGGAGAAGGTGCCGAATCTGAGTGGTTT----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679125 46 - 3785965 AGGCACAGAGTAGGTGCACAGAGAAGGTGCCGAGACTGAGTGGTTT----- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63722 46 - 179258 AGGCACAGAGTAGGTGCACAGAGAAGGTGCCGAATCTGAGTGGTTT----- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549221 41 - 5823884 AGGCACAGAG----------GAGTAGGTGCCAAATCTGAGTGGTTTTATTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31808 51 + 372756 AGGCACGTAGTAGGTGCACACAGTAGGTGCTGAATCTGAGTGGTTTTATTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269284 51 + 16356641 AGGCACATAGTAGGTGCACACAGTAGGTGCCAAATCTGAGTGGTTTTATTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138312 51 + 1231380 AGGCACATAGTAGGTGCACACAGTAGGTGCCGAATCTGAGAGGTTTTATTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668375 50 + 11732439 -GGCACATAGTAGGTGCACCCAGTAGGTGCCGAATCTGAGTGGTTTTATTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56852447 49 + 57149010 AGGCACATAGTAGGTGCACACAGTAGGTGCCAAATCCTAGTGGCT--ACCC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1845945 49 - 2029793 AGGCACATAGTAGGTGTACACAGTAGGTGCCAAATCCTAGTGGTT--ACCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22833113 32 + 22939663 -----------------ACATAGTAGGTGCCAAGGCCTAGTGGCC--ACCT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47594475 51 + 47698779 AGGCGCACAGTAGGTGTACACAGTAGGTGTCAAGTCCCAGTGGTTTTACTC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 232530 38 - 397369 -------------CAGCACAGAGTAGGTGCCAAATACTAGCAGTTTCCCCC i dasNov3.JH569290 C 0 I 1 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181781189 62 + 182113224 I a score=2469581.000000 s hg38.chr20_KI270870v1_alt 97526 222 + 183433 GTTCCTCTGTAGACCT---CGTATTA--GGCTGTCTCCTTGACTACCAAATCTGCTTTCCTCTGTGTTTATGCTCTGGAAGGTAATCCGAAGCCCTTTAATGGGATGGAAGCATTTCCAGATAAGAAGAGGGT-GCTGTGGCCAGAGGCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAACCCTAGAGAAGAATTGCATTTGGGGATGCACATC---AAAAACACGAGGA s panTro5.chr20 66424343 222 + 66533130 GTTCCTCTGTAGACCT---CGTATTA--GGCTGTCTCCTTGACGACCAAATCTGCTTTCCTCTGTGTTTATGCTCTGGAAGGTAATCCGAAGCCCTTTAATGGGATGGAAGCGTTTCCAGATAAGAAGAGGGT-GCTGTGGCCAGAGGCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAACCCTAGAGAAGAATTGCATTTGGGGATGCACATC---AAAAACACAAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099488 222 + 62195757 GTTCCTCTGTAGACCT---CGTATTA--GGCTGTCTCCTTGACGACCAAATCTGCTTTCCTCTGTGTTTATGCTCTGGAAGGTAATCCGAAGCCCTTTAATGGGATGGAAGCATTTCCAGATAAGAAGAGGGT-GCTGTGGCCAGAGGCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAACCCTAGAGAAGAATTGCATTTGGGGATGCACATC---AAAAACACAAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 488833 222 - 578057 GTTCCTCTGTAGACCT---CGTATTA--TGCTGTCTCCTTGACGACCAAATCTGCTTTCCTCTGTGTTTATGCTCTGGAAGGTAATCCGAAGCCCTTTAATGGGATGGAAGCATTTCCAGATAAGAAGAGGGT-GCTGTGGCCAGAGCCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAACCCTAGAGAAGAATTGCATTTGGGGCTGCACATC---AAAAACACGAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110012980 222 - 110113093 ATTCCTCTGAAGACCT---CATATTA--TGCTGTCTCCTTGACGACCAAATCTGCTTTCCCCTGTGTTTATGCTCCAGAAGGTAATCCGAAGCCCCGTAATGGGATGGAAGCATTTCCAGATAAGAAGAGGAT-GCTGTGGCCAGAGCCGCAGGGCTGCCTGGGGCCAGGAGTGGCCAGAATCCTAGAGAAGAATTGCATTTGGGGATGCACATC---AAAAACATGAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738246 189 - 92844088 -----------------------------------TCCTTGACGGCCAAACCGGCTTTCCTCTGTGTTTCTGCTCTGGAAGGTAAT-CGAAGCCCTTTACTGGGATAGAAGCATTTCCAGATAAGAAGAGGAT-GCTGAGGCCACAGCCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAATCCTAGAGAAAAATTG--TTTGGGGATGCACCTC---AAAAACACGAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406296 189 + 96509753 -----------------------------------TCCTTGACGGCCAAACCGGCTTTCCTCTGTGTTTCTGCTCCGGAAGGTAAT-CGAAGCCCTTTACTGGGATAGAAGCATTTCCAGATAAGAAGAGGAT-GCTGAGGCCACAGCCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAATCCTAGAGAAAAATTG--TTTGGGGATGCACCTT---AAAAACACGAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877282 189 - 16982598 -----------------------------------TCCTTGACGGCCAAACCGGCTTTCCTCTGTGTTTCTGCTCCGGAAGGTAAT-CGAAGCCCTTTACTGGGATAGAAGCATTTCCAGATAAGAAGAGGAT-GCTGAGGCCACAGCCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAATCCTAGAGAAAAATTG--TTTGGGGATGCACCTC---AAAAACACGAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679171 190 - 3785965 -----------------------------------TCCTTGACGGCCAAATCGGCTTTCCTCTGTGTTTCTGCTCCGGAAGGTAATCCGAAGCCCTTTACTGGGATGGAAGCATTTCCAGATAAGAAGAGGAT-GCTGAGGCCACAGCCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAATCCTAGAGAAAAATTG--TTTGGGGATGCACCTC---AAAAACACGAGGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63768 190 - 179258 -----------------------------------TCCTTGACGGCCAAATCGGCTTTCCTCTGTGTTTCTGCTCCGGAAGGTAATCCGAAGCCCTTTACTGGGATGGAAGCATTTCCAGATAAGAAGAGGAT-GCTGAGGCCACAGCCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAATCCTAGAGAAAAATTG--TTTGGGGATGCACCTC---AAAAACACGAGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549262 222 - 5823884 ATTCCTTTGAAGACTT---TGTGTTA--TGTTGTCTCCTTGACGGCCAAATCGGCTTTCCTCTGTGTTTCTGCTCCGGAAGGTAATCCGAAGCCCTTTACTGGCATGGAAGCATTTCCAGATAAGAAGAGGAT-GCTGTGGCCACAGCCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAATCCTAGAGAAAAATTGCATTTGGGGATGCACCTC---AAAAACATGAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 31859 221 + 372756 TTTCCTCTGAAGACCT---TGTATTA--TGCTGTCTCCTTGACGACCAAATCTGCTTTCCTCTGTGTTTATGCTCTGGAAGGTAATCCGAAGCCCTTTAATAGGATGGAAGCATTTCCAGATAAGAAGAAGAT-GCTGTGGCCAGAGCCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAATCCTAGAGAAAAATTGCATTTGGGGATGCATGGG----GAAGCATAAGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269335 221 + 16356641 GTTCCTCTGAAGACCT---TGTATTA--CGCTGTCTCCTTGACGACCAACTTTGCTTTCCTCCGTGTTTATGCTCCGGAAGGTAATCCGAAGCCCTTTAATGGGATGGAAGCATTTCCAGATAAGAAGGGGAT-GCTGTGACCAGAGCCACAGGGCTGCCTGGGGCCAGGAGTGGCCAGAGTCCTAGAGAAAAATTGCATTTGGGGATGCACATC----GAAACGTGAGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138363 221 + 1231380 ATTCCTCTGAAGACCT---TGTATTA--CGCTGTCTCCTTGACGACCAAATCTGCTTTCCTCTGTGTTTATGCTCTGGAAGGTAATCCGAAGCCCTTTAATGGGATGGAAGCATTTCCAGATAAGAAGAGGAT-GCTGTGGCCAGAGCCACAGGGCTGCCTGAGGCCAGGAGTGGCCAGAATCCTAGAGAAAAATTGCATTTGGGGATGCACATC----GAAATGTGAGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668425 221 + 11732439 ATTCCTCTGAAGACCT---TGTATTA--CGCTGTCTCCTTGACGACCAAATCTGCTCTCCTCTGTGTTTATGCTGCGGAAGGTAATCCGAAGCCCTTTAATGGGATGGAAGCATTTCCAGATAAGAAGAGGGT-GCTGTGGGCAGAGCCACGGGGCTGCCTGGGGCCGGGAGTGGCCGGAATCCTGGAGAAAAAGTGCATTTGGGGATGCACATC----CAAACGTGAGGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56852496 222 + 57149010 ATTCCTTTGAAGACCT---TGCATTA--TGCTGTCTCCTTGACTACCAAATCTCCTGTCCTCAGTGTCTGTGCTCTGGAAGGTAATCCAAGGCCCTTTAAAGGGATGGAGGCATTTCTAGATAACAAGAGGGATGTTGAGGCCAGAGCCACAGGGCTGCCTGGGGCCAGGAGTGG-TGGAAATCTTGAGAAAAATAGCATTTGGGGAAGCACATC---AAAAATATGGGGA i micMur3.chr18 C 0 I 31 s proCoq1.NW_012150197v1 1845994 221 - 2029793 ATTCCTTTGAAGACCT---TGCCTTT--TGCCGTCTCCTTGACTACCAAATCTCCTTTGCTGTGTGTCTGTGCTCTGGAAGGTGATCCAAGGCCCTTTAAAGGGATGGAGGCATTTCTAGATAACAAGAGGAA-GTTGTGGCCAGAGCCACAGGGCTGCCTGGGGCCAGGAGAGG-TGGAAATCGTGAGAAAAATGGCATTTGGGGAAGCGCATC---AGAAACGTGAGGA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22833145 187 + 22939663 TTTCCTTTG--------------------------------------ACACTTTCTTTGCATTTTCCATATACTCTGGAAGGTAATCC-AGGCCCTTTAATGGCCTGGAGTCATTTCCAGATAACAAGAGTGT-GCTATGGCCAGAGCCACAGGGCTGCCCAGGGCCAGGAGTGG-TGGAATTCTTGAGAAAAATAGCATTTGGGGAAGTACATA---AAAAATGTGAGGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181781251 199 + 182113224 GTTCCTTTGGAGACTT---TGTA------------GCTTTGGCAGCTACGTCTAATTTATTCTTTGTCTTGGCTCATGAAGGGACTCTGA-GCCCTTTAAGGGGATGGAGATATTTTCAAGGAACAAGGTCAT-GATAT-------------AGGGTGACTGGGGCCAGGAGTGG-TAGAATTCTGGATAAAAACAGT-TTTGGTAATGCATCCCACTAAAAATATAGGGT i mm10.chr2 I 62 C 0 s canFam3.chr24 47594526 209 + 47698779 ATTCCTTTGAAGACCT---TGCATTA--GGCCATCTCCTTGACAACCAC-TCTGCTTCCCTGTGT---TGTGCTCCTTGAGGTCACAGGAGGCGCTTTAATGGGATGGAGACATTTTCAGAC---AAGAGGAT-GCTCTGGCCGGAGCCAT-GGGCCGCCTGGGG-CAGGAGT-GCTGGAATTTT--AGAAAAATAGCGTTTGGAG-TACATGTC---AGGAGCATGAGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 232569 200 - 397369 AGCCCGCCAAAGACCCGTGCGAGGCACCTGCCACCTCCTTGATGACCAGGTCCACTCTCCTCCATGTTTATAC-CCACAGAGTAAT------------------AAGGAGGCATTTCCAGAAAACAAGGAGCA-GCTGTGTCCAGTCCCA---GGCTGTGTGGGGCCACGAGTGGTCGGATTCT-----GTAAACGGCATTCGGGGACACATACC---AAAAATGCAAGGA i dasNov3.JH569290 I 1 I 1 e chlSab2.chr2 90273961 2150 - 90373283 I a score=84032.000000 s hg38.chr20_KI270870v1_alt 97748 7 + 183433 AAAGAAA s panTro5.chr20 66424565 7 + 66533130 AAAGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099710 7 + 62195757 AAAGAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489055 7 - 578057 AAAGAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013202 7 - 110113093 AAAGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738435 7 - 92844088 AAAGAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406485 7 + 96509753 AAAGAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877471 7 - 16982598 AAAGAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679361 7 - 3785965 AAAGAAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63958 7 - 179258 AAAGAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549484 7 - 5823884 AAAGAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32080 7 + 372756 AAAGGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269556 7 + 16356641 AAAGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138584 7 + 1231380 AAAGGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668646 7 + 11732439 AAAGGAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1846215 7 - 2029793 GAAGAAA i proCoq1.NW_012150197v1 C 0 I 16 s otoGar3.GL873542 22833332 7 + 22939663 AAAGGAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181781450 1 + 182113224 -----A- i mm10.chr2 C 0 C 0 s canFam3.chr24 47594735 7 + 47698779 GAAGAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 232770 7 - 397369 AAAAAAA i dasNov3.JH569290 I 1 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56852718 31 + 57149010 I a score=87404.000000 s hg38.chr20_KI270870v1_alt 97755 8 + 183433 GAAAGTGG s panTro5.chr20 66424572 8 + 66533130 GAAAGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099717 8 + 62195757 GAAAGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489062 8 - 578057 GAAAGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013209 8 - 110113093 GAAAGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738442 8 - 92844088 GAAAATGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406492 8 + 96509753 GAAAATGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877478 8 - 16982598 GAAAATGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679368 8 - 3785965 GAAAATGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63965 8 - 179258 GAAAATGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549491 8 - 5823884 GAAAATGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32087 8 + 372756 GAAAACGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269563 8 + 16356641 GAAGACGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138591 8 + 1231380 GAAAATGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668653 8 + 11732439 GAAAATGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22833339 5 + 22939663 ---AATGA i otoGar3.GL873542 C 0 I 11 s mm10.chr2 181781451 4 + 182113224 ----GTGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47594742 8 + 47698779 GATAATGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 232777 8 - 397369 GATGATGG i dasNov3.JH569290 C 0 I 2 e proCoq1.NW_012150197v1 1846222 16 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56852718 31 + 57149010 I a score=76767.000000 s hg38.chr20_KI270870v1_alt 97763 7 + 183433 GTGGGAA s panTro5.chr20 66424580 7 + 66533130 GTGGGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099725 7 + 62195757 GTGGGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489070 7 - 578057 GTGGGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013217 7 - 110113093 GTGGGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738450 7 - 92844088 GTGGGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406500 7 + 96509753 GTGGGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877486 7 - 16982598 GTGGGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679376 7 - 3785965 GTGGGAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63973 7 - 179258 GTGGGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549499 7 - 5823884 ATGGGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32095 7 + 372756 GTGGGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269571 7 + 16356641 GTGGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138599 7 + 1231380 GTGGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668661 7 + 11732439 GTGGGAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1846238 7 - 2029793 GTATGCC i proCoq1.NW_012150197v1 I 16 C 0 s otoGar3.GL873542 22833355 7 + 22939663 GTGTGCT i otoGar3.GL873542 I 11 C 0 s mm10.chr2 181781455 6 + 182113224 -TGGAGA i mm10.chr2 C 0 I 3 s canFam3.chr24 47594750 7 + 47698779 GTATGAC i canFam3.chr24 C 0 I 10 s dasNov3.JH569290 232787 7 - 397369 GTGGCAA i dasNov3.JH569290 I 2 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56852718 31 + 57149010 I a score=5641866.000000 s hg38.chr20_KI270870v1_alt 97770 397 + 183433 TAGCG---------TGCCTTCGGCAGAATCCAAACTCACT--------TCCAAGGCAAAGCC-AGGGCCCAACACGAGAATATTCATTTCCTG-TTTCATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGCGTTTCTTTGTCATGTCCAGCTGATGCGTTCAGCCTCTGCTCAGACATGGGAATTTATGTGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGACAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGGGGC-CCCCGGGATCCTGC---GGGAGG---------C-----------AAAGCTGATTTGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT s panTro5.chr20 66424587 397 + 66533130 TAGCG---------TGCCTTCGGCAGAATCCAAACTCACT--------TCCAAGGCAAAGCC-AGAGCCCAACACGAGAATATTCATTTCCTG-TTTCATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGTGTTTCTTTGTCATGTCCAGCTGATGCGTTCAGCCTCTGCTCAGACATGGGAATTTATGTGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGACAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGGGGC-CCCCGGGATCCTGC---GGGAGG---------C-----------AAAGCTGATCTGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62099732 397 + 62195757 TAGCG---------TGCCTTCGGCAGAATCCAAACTCACT--------TCCAAGGCAAAGCC-AGAGCCCAACACGAGAATATTCATTTCCTG-TTTCATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGTGTTTCTTTGTCATGTCCAGCTGATGCGTTCAGCCTCTGCTCAGACATGGGAATTTATGTGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGACAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGGGGC-CTCCGGGATCCTGC---GGGAGG---------C-----------GAAGCTGATCTGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489077 397 - 578057 TAGCG---------TGCCTTCAGCAGAATCCAAACTCACT--------TCCAAGGCAAAGCC-AGAGCCCAACACGAGAATATTCATTTCCTG-TTTCATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCGTTCAGCCTCTGCTTAGACATGGGAATTTATGTGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGACAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGGGGC-CCTTGGGATCCTGC---AGGAGG---------C-----------AAAGCTGATTTGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013224 398 - 110113093 TAGTG---------TGCCTTCGGCAAAATCCAAACTCACT--------TCCAAGG-GAAGCC-AGAGCAGAACGGGAGAATATTCATTTCCTG-TTTCATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTCTGCTCAGACATGGGAATTTATGTGA------GGAATTAAATATTAACTGGAGGCGTTGCCCTGGAGAGAGGCAGAAACACAGGGTGAGAAAAGATTTTGGAAACCAGGGCAAAGAG----CGTGCT-GGGC-CCCCGGGATCCTGCGGGGGGGGG---------C-----------AAAGCTGATTTGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738457 397 - 92844088 TAGTG---------TGCCTTCGGCAGAATCCAAACTCACT--------TCCAAGGCGAAGCC-AGAGCAGAATGCAAGGATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTCTGCTTAGACGTGGGAATTTAT-TGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGAGAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGAGGC-CCCTGGGATCCTGC---AGGAGG---------C-----------AAAGCTGATTGGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406507 397 + 96509753 TAGTG---------TGCCTTCGGCAGAATCCAAACTCACT--------TCCAAGGCGAAGCC-AGAGCAGAATGCAAGGATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATACATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTCTGCTTAGACGTGGGAATTTAT-TGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGAGAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGAGGC-CCCTGGGATCCTGC---AGGAGG---------C-----------AAAGCTGATTGGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877493 397 - 16982598 TAGTG---------TGCCTTCGGCAGAATCCAAACTCACT--------TCCAAGGCGAAGCC-AGAGCAGAATGCAAGGATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTCTGCTTAGACGTGGGAATTTAT-TGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGAGAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGAGGC-CCCTGGGATCCTGC---AGGAGG---------C-----------AAAGCTGATTGGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679383 397 - 3785965 TAGTG---------TGCCTTCGGCAGAATCCAAACTCACT--------TCCAAGGCAAAGCC-AGAGCAGAATGCAAGAATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTCGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTCTGCTTAGACATGGGAATTTAT-TGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGAGAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGAGGC-CCCTGGGATCCTGC---GGGAGG---------C-----------AAAGCTGATTGGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 63980 397 - 179258 TAGTG---------TGCCTTTGGCAGAATCCAAACTCACT--------TCCAAGGCAAAGCC-AGAGCAGAATGCAAGAATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTCTGCTTAGACGTGGGAATTTAT-TGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGAGAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGAGGC-CCCTGGGATCCTGC---GGGAGG---------C-----------AAAGCTGATTGGAGACC-AT-------------------------GGGTGG-ATCTCACTTTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549506 397 - 5823884 TAGTG---------TGCCTGCGGCAGAATCCAAACTCACT--------TCCAAGGCGAAGCC-AGAGCACAATGCAAGAATCTTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGCCGTGCAGGGAATAGGTACACAAGGCATTTCTTTGTCGTGTCCAGCTGATGCATTCAGCCTCTGCTTAGACGTGGGAATTTAT-TGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGAGAAAAGATGCTGGAAACCAGGGCAAAGAG----CATGCTGAGGC-CCCTGGGATCCTGC---GGGAGG---------C-----------AAAGCTGATTTGAGACC-AT-------------------------GGGTGG-GTCTCACTTTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32102 398 + 372756 CAGTG---------TGCCTTCAGCAGAACCCAAACTGACT--------TCCAAGGCAAAGGC-AGAGCAGAATGCAAGAATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTTCTTTGAAAT---GCTGCAGTTATGTAGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTCTGTTTAGACATGGGAATTTATGTGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGAGAAAGGACGATGAAAACCGGGGCAAAGAG----CCTGGTGGGGC-CCCCAGGATCCTGT---GGGAGG---------C-----------AAAGCTGACTGGACACC-AT-------------------------GGGTGG-ATCTCACTTTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269578 398 + 16356641 CAGTG---------TGCCTTCGGCAGAACCCAGACTCACT--------TCCGAGGCGAAGCC-AGAGCAGAATGCAAGAATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTGGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTCTGCTTAGACACGGGAATTTATGTGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGAGAAAAGACGATGAAAACCAGGGCAAAGAG----CCTGGTGGGGC-CCCCGGGATCCTGT---GGGAAG---------G-----------AAAGCTGACTTGACGCC-AT-------------------------GGGTGG-GTCTCACTTTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138606 392 + 1231380 CAGTG---------TGCCTTCAGCAGAGCCCAAACTCACT--------TCCGAGGCGAAGC------CAGAATGCAAGAATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTATGTGGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGGGCAGGGAATAGGTACACAATGCATTTCTTTGTCACGTCCAGCTGATGCATTCAGCCTCTGCTTAGACATGGGAATTTATGTGA------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGAAACACAGGGTGAG-AAGGACGATGAAAACCAGGGCAAAGAG----CCTGGTGGGGC-CCCCGGAGTCCTGC---GGGAAG---------C-----------AAAGCTGACTTGACGCC-AT-------------------------GCATGG-ATCTCACTTTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2668668 399 + 11732439 CAGTG---------TGCCTTCGGCAGAACCCAAACTCACT--------TCCGAGGCGAAGCC-AGAGCAGAATGCAAGAATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAT---GCTGCAGTTGTGTGGAAAGCAGGTTGTCATGGAAACGGGGAGTGACGTGCAGGGAATAGGTGCACAGTGCATTTCTTTGTCGTGTGCAGCTGATGCATTCAGCCTCTGCTTAGACATGGGAATTTACGTGA------GGAATTAAATATTAACTGGAGGCATTGCCCCGGAGAGAGGCAGAGACACAGGGTGAGAAAAGACGAGGAAAACCCGGGCGAAGAG----CCTGCTGGGGC-CCCCGGGACCCTGC---GGGAGG---------C-----------AAAGCTGACCTAACACC-AT-------------------------GAGTGGAATCTCACTTTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56852749 397 + 57149010 TGGCC---------CGCTTTCAGCAGAATCCAAACTCACT--------TCCAAGGAGAAACCGAGAGCAGAATGCAGAAATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAATGCCGCTGCAGT--TGTAGAAAGCAGGTTGTCATGGAAACAGAGAGTGACGTGCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTTGGCTTAGACTTGCGAATCTATGTAG------GGAATTAAATATTAACTGGAGGCATTGCCCTGGAGAGAGGCAGCAACACAGGGCGAGAAAAGATGCTG-GAAGGA-GGCAAAGAG----TGCCCGTGGGG-CCCAGGGCTCCTGT---GGGAGG---------C-----------AAAGCGGATGGGA-ACC-GC-------------------------GAGTGG-ACCTCACTGTCC i micMur3.chr18 I 31 C 0 s proCoq1.NW_012150197v1 1846245 399 - 2029793 TGGCC---------TGCTTTCAGCAGAATCCAAACTCACT--------TCCAAGGAGAAACCGAGAGCAGAATGCAGAAATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAATGCCGCTGCAGT--TGTGGAAAGCAGGTTGTCATGGAAACAGAGAGTGACGTGCAGGGAATAGGCACACAATGCGTTTCTTTGTCGTGTCCAGCTGATGCATTCAGCCTCGGCTGAGAC-TGTGAATCTATGTAA------GGAATTAAATATTAACTGGAGGCCTTGCCCTGGAGAGAGGCAGCAGCGCAGGGCGAGAAAAGATGCGG-AAAGGAGGGCGAAGCG----CGCCGGGGGGGCCCCCGGGCTCCTGT---GGGAGG---------C-----------AAAGCTGGTTGGG-ACC-GT------------------------GGGGTGG-ACCTCACTGTCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22833362 417 + 22939663 TGGCC---------TGGTTTCAGCAGAATCCAAACTCATT--------TCCAAGGAGAAACTGAAAGCAGAGTACAGAAATATTCATTTCCTGTTTTTATTGTTGGTTATTTAATGACCTTCCTTTGAAATGCTGCTGCAGT--TGTAGAAGGCAGGTTGCCATGGAAAC--AGAGTGACA-GCAGGGAATAGGTACACAATGCATTTCTTTGTCATGTCCAGCTGATGCATTCAGCCTCTGCTTAGACATGTGAATCTATGTAA------GGAATTAAATATTAACTGGAGGCATCACCC--AAAAGAGGCAGCAACAC-TGGCAAGAAAAGATGCTGAAAAGGAGGGCAAAGGA----CACTGGTGGGG-CCCAGGGCTCCAGT---GGGATG---------C-----------AAAGCCTATTGGG-TCC-TTGGTGGGCGGGGGTGGGGGGGTGAGGGGGTGG-G-GTCACTTCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181781464 406 + 182113224 TAATA-------------TTTATGATAATGTGTACTCAATCTGCCTTCTCCTAGGAGAAG---AAAGCAGAATGTAGGAATATTCATTTCCTGTTTTTATTGTTGGTAAC-TAATGACCTTCCTTTGAA-----ACTGCAG---CATAGAAAGCAGGTTGTCATGGAGACAGGGAATGACGTTCAGGGAATAGGTACACAATGAATTTCTTTGTTGTGTCCAGCTGATATATTCAGCCTCTGCTTAGATGTGTGAATTTATGTGAATTATGAGAATTAAATATTAACTGTAGGCATTGCTCTGGAGAGAGGTAAAACCA--GGAGGAGAAAATATACTGAAAACAAGTAATGAGTG----C-TAGTGGGGT-GCAGAGTTCCTTGT---GAGAGGCCATGTTATC-----------AGAAATGATCAGGCCCA-CC-------------------------GGATGG-GCTTCACTTTCC i mm10.chr2 I 3 C 0 s canFam3.chr24 47594767 339 + 47698779 TGACC---------TGCCTTCAGCTGAATCGAAGCTCACT--------TCTAAAGGGAAGCGGAGAGCAGAATGCAGGAATACTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCCTTTGAAAC---GCTGCAGT--TGTAGAAAGCTCGTTGTCATGGAAACAGGGAGTGCCACGCAGGGAATAGG---------CATTTCTTTGTCATGTCCAGCTGATGCCTTCAGCCTGTGCTTAGACATGTGAATTTATGTGA------GGAATTAAATATTTACTGGCGACATTGCCCTGGAGAGAGGCAGCAACG--GGGAGAGGAATGATGGCGGGACCCAGGGCCGAGGG----GACGCAAAGGG-TCCCACCCCCC------------------------------------------------------------------------------------------------- i canFam3.chr24 I 10 I 9 s dasNov3.JH569290 232794 414 - 397369 CAGTGCGCTAGATCTGCCTT---CAGAATTCAAAC-CTCT--------TAGAAGAAAAAGT--GGTTCAGAATGCAGGAATATTCATTTCCTGTTTTTATTGTTGGTTACTTAATGACCTTCTTTTGAAAT---GCCGCAAT--TGTAGAGGGCTGGTTGTCATGGAAACATGGAGTGACGTGCAGGGAATAGGTGCACAGTGCGTTTCTTTGTCATGTCCAGCTGATACATTCGGCCTCTGCTTAGACGTGTGAATTTATGTGA------GGAATTAAATATTAACTGGAGGGATTGCCCTGGAGAGAGGCCGTG-CACAGGGGAGGGAAAAACAC---GAACTAGGACAAAGCAGTGCCGTGCCGTGGG-CCCTGTGGCCCCTC-TTGGGAGG---------CGAAGTGCGGGAGAAGTCGACTTGGGGCTGGC-------------------------AGGGTG-TCCTCACTTTCC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=515431.000000 s hg38.chr20_KI270870v1_alt 98167 37 + 183433 TCAATCAATGGGCTCCAGAGAAGTCGTGCAAAACAAT s panTro5.chr20 66424984 37 + 66533130 TTAATCAATGGGCTCCAGAGAAGTCATGCAAAACAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100129 37 + 62195757 TTAATCAATGGGCTCCAGAGAAGTCATGCAAAACAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489474 37 - 578057 TCAATCAATGGGCTCCAGAGAAGTTGTGCAAAACAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013622 37 - 110113093 TCAATCAGTGGGCTCCAGAGAAGTCATGCAAAACAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738854 37 - 92844088 TCAATCAATGGGCTCCAGAGAAGTCGTGCAAAACAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406904 37 + 96509753 TCAATCAATGGGCTCCAGAGAAGTCGTGCAAAACAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877890 37 - 16982598 TCAATCAATGGGCTCCAGAGAAGTCGTGCAAAACAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679780 37 - 3785965 TCAATCAATGGGCTCCAGAGAAGTCGTGCAAAACAAT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64377 37 - 179258 TCAATCAATGGGCTCCAGAGAAGTCGTGCAAAACAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549903 37 - 5823884 TGAATCAATAGGCTCCAGAGAAGTCGTGCAAAACAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32500 37 + 372756 TCCATCAATGGGCTCCAGAGAAGTTGTACAAAACAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16269976 37 + 16356641 CCCATCAATGGGCTCCAGAGAAGTTGTGCAAAACAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1138998 37 + 1231380 TCCATCAGTGGGCTCCAGAGAAGTTGTGCAAAACAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669067 37 + 11732439 TCCATCAGTGGGCTCCAGAGAAGTTGTGCAAAACAAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56853146 37 + 57149010 TCAGTCAAAGGGCTCCAGAGAAGTTGTGCAAAGCAAT i micMur3.chr18 C 0 I 15 s proCoq1.NW_012150197v1 1846644 37 - 2029793 TTGGTCAAAGGGCTCCAGAGAGGTTGTGCAAAGCAAT i proCoq1.NW_012150197v1 C 0 I 3 s otoGar3.GL873542 22833779 37 + 22939663 TCCATCAGCGGGTTCCAGAGAAGTTGTGCAAAGCAAT i otoGar3.GL873542 C 0 I 142 s mm10.chr2 181781870 34 + 182113224 TCAGTCAGTGGGTGCTTGAGAAGTTG---AAAACATA i mm10.chr2 C 0 I 2 s dasNov3.JH569290 233208 37 - 397369 TCAACCAAGGGCCTCCAGCGCAGGCGTGCAAAGCAGT i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47595106 9 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=1193324.000000 s hg38.chr20_KI270870v1_alt 98204 101 + 183433 CTTCTTTT-------TCAAATGCATATGTACTGTGCATTCTTTTGAGGGGC-A-GAAGGATCTGGTTGTAATGCGAATAATTACTCATTAGTCAGCTCATTTTCAAAGTT s panTro5.chr20 66425021 101 + 66533130 CTTCTTTT-------TCAAATGCATATGTACTGTGCATTCTTTTGAGGGGC-A-GAAGGATCTGGTTCTAATGCGAATAATTACTCATTAGTCAGCTCATTTTCAAAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100166 101 + 62195757 CTTCTTTT-------TCAAATGCATATGTACTGTGCATTCTTTTGAGGGGC-A-GAAGGATCTGGTTGTAATGCGAATAATTACTCATTAGTCAGCTCATTTTCAAAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489511 100 - 578057 CTTCTTTT-------TCAAATGCATATGTACTGTGCATTCTTTTGAGGGG--A-GAAGGATCTGGTTGTAATGCGAATAATTACTCATTAGTCAGCTCATTTTCAAAGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013659 92 - 110113093 CTTCTTTT-------TCAAATGCATATGTACTGTGCATTCTTTTGAGGGGC-G-GAAGGATCTGGTTG---------TAATTACTCATTAGTCAGCTCATTTTCAAAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738891 101 - 92844088 CTTCTTTT-------TCAAATGCATATGTACTGTGCCTTCTTTTGAGGGGA-A-GAAGGATCTGGTTGTAAGGCGAATAATTACTCATTAGTCAGCTCATTTTCAAGGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96406941 101 + 96509753 CTTCTTTT-------TCAAATGCATATGTACTGTGCATTCTTTTGAGGGGA-A-GAAGGATCTGGTTGTAAGGCGAATAATTACTCATTAGTCAGCTCATTTTCAAGGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16877927 101 - 16982598 CTTCTTTT-------TCAAATGCATATGTACTGTGCATTCTTTTGAGGGGA-A-GAAGGATCTGGTTGTAAGGCGAATAATTACTCATTAGTCAGCTCATTTTCAAGGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679817 101 - 3785965 CTTCTTTT-------TCAAGTGCACATGTACTGTGCATTCTATTGAGGGGA-A-GAAGGATCTGGTTGTAAGGCGAATAATTACTCATTAGTCAGCTCATTTTCAAGGTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64414 101 - 179258 CTTCTTTT-------TCAAATGCACATGTACTGTGCATTCTTTTGAGGGGA-A-GAAGGATCTGGTTGTAAGGCGAATAATTACTCATTAGTCAGCTCATTTTCAAGGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5549940 101 - 5823884 CTTCTTTT-------TCAAATGCATATGTACCGTGCATTCTTTTGAGGGGA-A-GAAGGATCTAGTTGTAAGGCGAATAGTTACTCATTAGTCAGCTCATTGTCAAGGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32537 101 + 372756 CTGCTTTT-------TCAAATGAATATGTACTGTGCATTCTTTTGAGGGGC-A-GAAGGATCTGGTTGTAACATGAATAATGACTCGTTAGTCAGCTCATTTTCAAAGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270013 96 + 16356641 CTGCTTTT-------TCAAATGAATATGTGCTGTGCATTCTTTTGAGGGGC-A-GAAGGATCTGGTTGTAAC-TGAATAATTACTCGTT----AGCTGATTTTCAAAGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139035 97 + 1231380 CTGCTTTT-------TCAAATGAATATGTACTGTGCATTCTTCTGAGGAGC-A-GAAGGATCTGCTTATAACGTGAATAATTACTCCTT----AGCTCATTTTCAAAGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669104 101 + 11732439 CTGCTTTT-------TCAAATGAATATGTACCGTGCATTCTTTTGAGGGGC-A-GAAGGATCTGGTTGTAACGTGAATAATTACTCGTTAGTCAGCTCATTTTCAAAGTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56853198 102 + 57149010 tctttttt-------GCAAATGGATCTGTGCTGTTCATTCTTTTGGGGTCA-GTGAAGGATCTAGTTGTGATGTGAATAGTTACTCATTAGATAGCTCATTTTCAAAGTT i micMur3.chr18 I 15 C 0 s proCoq1.NW_012150197v1 1846684 89 - 2029793 --------------------TGGATCTGTGCTGTGCATTCTTTTGGGGACA-GTGAAGGATCTAGTTGTAATGTGAATAGTTACTCGTTAGATAGCTCGTTTTCAGAGTT i proCoq1.NW_012150197v1 I 3 C 0 s otoGar3.GL873542 22833958 98 + 22939663 ttctttct-------GCAAATGGATCTGTGCTGTGCATTCTTTTGTGGTCA-GTGAAGGATCTGGTTGTAATATGAATCGTTACTTAT----TAGCTCATTTTCAAAGTT i otoGar3.GL873542 I 142 C 0 s mm10.chr2 181781906 109 + 182113224 ATACATTTAACAAAAGCAAATGGACCTGAGCTGCACATTCTTTTGGGATAATA-AAAAAATGTAGTTATGATTGAGTTACTCACTCATTGGCCAGTTAGTTTTCAAAATC i mm10.chr2 I 2 I 341 s dasNov3.JH569290 233245 100 - 397369 -CTTTATT-------GCACATGGGTCTGCACTGGGAGTTCTATTGGGGCCC-T-GAAAGACCCGGTTGTGATGTGAATAATTACTCAGTAGTGAGCTCATTTTCAAAGTT i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47595106 9 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=16446.000000 s hg38.chr20_KI270870v1_alt 98305 3 + 183433 GGA s panTro5.chr20 66425122 3 + 66533130 GGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100267 3 + 62195757 GGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489611 3 - 578057 GGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013751 3 - 110113093 GGA i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 32638 3 + 372756 GGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270109 3 + 16356641 GGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139132 2 + 1231380 GG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669205 3 + 11732439 GGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56853300 3 + 57149010 GGA i micMur3.chr18 C 0 I 252 s proCoq1.NW_012150197v1 1846773 3 - 2029793 GGA i proCoq1.NW_012150197v1 C 0 I 292 s otoGar3.GL873542 22834056 3 + 22939663 GGA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 233345 3 - 397369 GGA i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47595106 9 + 47698779 I e cerAty1.NW_012001373v1 3679918 0 - 3785965 C e colAng1.NW_012114444v1 5550041 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782015 341 + 182113224 I e manLeu1.NW_012101652v1 64515 0 - 179258 C e macNem1.NW_012014244v1 16878028 0 - 16982598 C e rheMac8.chr10 92738992 0 - 92844088 C e macFas5.chr10 96407042 0 + 96509753 C a score=304917.000000 s hg38.chr20_KI270870v1_alt 98308 39 + 183433 GGGGTGACATGCCAAGTTTTCTCAAGGTG------GCTCTCAGCT s panTro5.chr20 66425125 39 + 66533130 GGGGTGACATGCCAAGTTTTCTCAAGGTG------GCTCTCAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100270 39 + 62195757 GGGGTGACATGCCAAGTTTTCTCAAGGTG------GCTCTCAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489614 39 - 578057 GGGGTGACATGCCAAGTTTTCTCAAGGTG------GCTCTCAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013754 39 - 110113093 GAGGTGAAATGCCAAGTTTTCTCAAGGTG------GCTGTCAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92738992 37 - 92844088 --GGTGAAATGCCACCTTTTCTCAAGGTG------GGTTTCAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407042 37 + 96509753 --GGTGAAATGCCAACTTTTCTCAAGGTG------GGTTTCAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878028 37 - 16982598 --GGTGAAATGCCAACTTTTCTCAAGGTG------GGTTTCAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679918 37 - 3785965 --GGTGAAATGCCAACTTTTCTCAAGGTG------GGTTTCAGCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64515 37 - 179258 --GGTGAAATGCCAACTTTTCTCAAGGTG------GGTTTCAGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550041 37 - 5823884 --GGTGAAATGCCAACTTTTCTCAAGGTG------GGTTTCAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32641 38 + 372756 GAGATTAAATGCCACATTTTCTC-AGGTG------GGTCTCAGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270112 38 + 16356641 GAGATTAAATGCCACATTTTCTC-AGGTG------GATCTTAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139134 38 + 1231380 GAGATTAAATGCCACATTTTCTC-AGGTG------GGTCTCAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669208 38 + 11732439 GAGATTAAATGCCACATTTTCCC-AGGTG------GGTCTCAGCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22834059 43 + 22939663 --ATTTGAATGCTATGTTTTCTCGAGGTGGAGGTAGGGCTCACCT i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 233348 39 - 397369 GCACTTAAATACCAAGCCTGCCCAAGGCA------GACTTCACCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1846776 292 - 2029793 I e canFam3.chr24 47595106 9 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782015 341 + 182113224 I e micMur3.chr18 56853303 252 + 57149010 I a score=537930.000000 s hg38.chr20_KI270870v1_alt 98347 83 + 183433 -GCCTTGTCCCAGCA--CTCTGCTGGCCGTGG--T--TGTCAGTGGGAACCAA--CACCT------------------------------AGAGCTGGGACAACAGTGCAGGGGACTGCA------GG s panTro5.chr20 66425164 83 + 66533130 -GCCTTGTCCCAGCA--CTCTGCTAGCCGTGG--T--TGTCAGTGGGAACCAA--CACCT------------------------------AGAGCTGGGACAACGGGGCAGGGGACTGCA------GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100309 83 + 62195757 -GCCTTGTCCCAGCA--CTCTGCTGGCCGTGG--T--TGTCAGTGGGAACCAA--CACCT------------------------------AGAGCTGGGACAACGGGGCAGGGGACTGCA------GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489653 83 - 578057 -GCCTTGTCCCAGCA--CTCTGCTGGCCGTGG--T--TGTCAGTGGGAACCAA--CACCT------------------------------AGAGCTGGGACAACGGTGCAGGGGACTGCA------GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013793 120 - 110113093 -GCCTTGTCCCAGCCCTCTCTGGTGGCCGTGG--T--TGTCAGTGGGAACCAA--CACCTACCC-AAGGCATGTTCCATGAAACGGCACCAGAGCTGGGACAACGGTGCAGGGGACTGTAGGTGCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739029 120 - 92844088 -GCCTTGTCCCAGCAATCTTTGGTGGGCGTGG--T--TGTCAGTGGGAACCAA--CACCCACCC-AAGGCATGTTCCATGAGACGGCACCAGAGCTAGGACAACGGTGCAGAGGACTGTAGGTGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407079 120 + 96509753 -GCCTTGTCCCAGCAATCTTTGGTGGGCGTGG--T--TGTCAGTGGGAACCAA--CACCCACCC-AAGGCATGTTCCATGAAACGGCACCAGAGCTAGGACAACGGTGCAGAGGACTGTAGGTGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878065 120 - 16982598 -GCCTTGTCCCAGCAATCTTTGGTGGGCGTGG--T--TGTCAGTGGGAACCAA--CACCCACCC-AAGGCATGTTCCATGAAACGGCACCAGAGCTAGGACAACGGTGCAGAGGACTGTAGGTGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3679955 120 - 3785965 -ACCTTGTCCCAGCAATCTTTGGCGGGCGAGG--T--TGTCAGTGGGAACCAA--CACCCACCC-AAGGCATGTTCCATGAAACGGCACCAGAGCTGGGACAACGGTGCAGACGACTGTAGGTGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64552 120 - 179258 -GCCTTGTCCCAGCAATCTTTGGCGGGCGAGG--T--TGTCAGTGGGAACCAA--CACCCACCC-AAGGCATGTTCCATGAAACGGCACCGGAGCTGGGACGACGGTGCAGACGACTGTAGGTGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550078 120 - 5823884 -GCCTTGTCCCAGCAATCTTTGGTGGGCGTGG--T--TGTCAGTGGGAACCAA--CACCTACCC-AAGGCATGTTCCATGAAACAGTACCAGAGCTGGGACAATGGTGCAGAGGACTGTAGATGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32679 101 + 372756 -GCCTTGTCCCAGCA--CTCTGGTGAGCACGG--C--TGACAGTGGGACCCAA-CCACCTACCC-AAGGCGCGTTGCATGA-GTAGCACCAGAGCTGGGACAATGGTG--GAG--------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270150 110 + 16356641 -GCCTTGTCCCAGCA--CTCTGGTGGGCATGG--C--TGACAGTGGGAACCAA-CCGCCTACCC-AAGGCATGTTGCATGA-ACAGCACCAGAGCGGGGACAATGGTG--GAGAACTGCAGG------ i saiBol1.JH378156 C 0 I 6 s cebCap1.NW_016107870v1 1139172 110 + 1231380 -GCCTTGTCCCAGCA--CTCTGGTGGGCATGG--C--TGACAGTGGGAACCAA-CCACCTACCG-AAGGCATGTTGAATGA-ACAGCACCAGAGCAGGGACAATGGTG--GAGGACTGCAGG------ i cebCap1.NW_016107870v1 C 0 I 54 s aotNan1.NW_018500483v1 2669246 110 + 11732439 -GCCTTATCCCAGCA--CTCTGGTGGGCATGA--C--TGACGGTGGTAACCGA-CCACCTACCC-AAGGCATGTTGCATGA-ACAGCACCAGAGCTGGGACAATGCTG--GAGGACTGCAGG------ i aotNan1.NW_018500483v1 C 0 I 6 s otoGar3.GL873542 22834102 95 + 22939663 -GATGTGT-GTGGCA-CCCCTGGGAGGAATAGCCC--TGTTGGAGGGGACCAG--CCTCC-CTC-AAGGCAC-------AAGGCAGCACCAGCCCTGTGGTGAGGAAG-AGA---------------- i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47595115 86 + 47698779 -GACTTGCACTAGCC--CCCTGGTAGGAGCTG--G--TGGTAGTGGAAACCG---CACCCACCTGGAGGCAGGT----------------GAAGATGGTGCATGGGTGCAGG---------------- i canFam3.chr24 I 9 C 0 s dasNov3.JH569290 233387 59 - 397369 GGACTTGCACCTCCCTCCCTGGTTTGGGCTGG--CTGTGTCAGGGGGCAACAGGGCGCCAG------------------------------------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1846776 292 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782015 341 + 182113224 I e micMur3.chr18 56853303 252 + 57149010 I a score=234293.000000 s hg38.chr20_KI270870v1_alt 98430 33 + 183433 AAGACTCCAGGGAGGC-CCCAAGTCAGA------------GAG-----------AAA s panTro5.chr20 66425247 33 + 66533130 AAGACTCCAGGGAGGC-CCCAAGTCAGA------------GAG-----------AAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100392 33 + 62195757 AAGACTCCAGGGAGGC-CCCAAGTCAGA------------GAG-----------AAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489736 33 - 578057 AAGACTCCAGGGAGGC-CCCAAGTCAGA------------GAG-----------AAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013913 34 - 110113093 AAGACTCCAAGGAGGCTCCCGAGTCAGA------------AAG-----------AAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739149 34 - 92844088 AAGACTTCGAGGAGGCTCCCGAGTCAGA------------GAG-----------AAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407199 34 + 96509753 AAGACTCCGAGGAGGCTCCCGAGTCAGA------------GAG-----------AAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878185 34 - 16982598 AAGACTCCGAGGAGGCTCCCGAGTCAGA------------GAG-----------AAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680075 34 - 3785965 AAGACTCCGAGGAGGCTCCCGAGTCAGA------------GAG-----------AAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64672 34 - 179258 AAGACTCCGAGGAGGCTCCCGAGTCAGA------------GAG-----------AAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550198 34 - 5823884 AAGACTCCAAGGAGGCTCCCGAGTCAGA------------GAG-----------AAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32780 32 + 372756 --GGCTCTGAGGAGGCTCCTGAGTCGGA------------GAG-----------AAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270266 34 + 16356641 AAGGCTCTGAGGAGGCTCTTGAGTCGGA------------GAG-----------AAA i saiBol1.JH378156 I 6 C 0 s aotNan1.NW_018500483v1 2669362 34 + 11732439 AAGGCTCTGAGGAGGCTCCTGAGTCGGA------------GAG-----------AAA i aotNan1.NW_018500483v1 I 6 C 0 s otoGar3.GL873542 22834198 32 + 22939663 CAGGTGCTGGAGAAG--CCCAAGTCAGA------------AAA-----------GCG i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47595201 41 + 47698779 -GTGCT----GGGAGCACCCCAGTCACAGGCTGTTTTCCTGAG-----------AAA i canFam3.chr24 C 0 I 4 s dasNov3.JH569290 233446 44 - 397369 -AAGCCTGGGAACAGCGCTCAAGTTAGA------------GGGTGCATTTTCTCAAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1846776 292 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782015 341 + 182113224 I e micMur3.chr18 56853303 252 + 57149010 I e cebCap1.NW_016107870v1 1139282 54 + 1231380 I a score=238699.000000 s hg38.chr20_KI270870v1_alt 98463 27 + 183433 ------TTGTCTCTTGTTCCTGAAGCAGCCATG s panTro5.chr20 66425280 27 + 66533130 ------TTGTCTCTTGTTCCTGAAGCAGCCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100425 27 + 62195757 ------TTGTCTCTTGTTCCTGAAGCAGCCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489769 27 - 578057 ------TTGTCTCTTGTTCCTGAAGCAGCCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013947 27 - 110113093 ------TTGTCTCTTGTCCCTGAAACAGCCATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739183 27 - 92844088 ------TTGTCTCTTGTGCCTGAAACGGCCGCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407233 27 + 96509753 ------TTGTCTCTTGTCCCTGAAACGGCCGCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878219 27 - 16982598 ------TTGTCTCTTGTCCCTGAAACGGCCGCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680109 27 - 3785965 ------TCGTCTCTTGTCCCTGAAACGGCCACA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64706 27 - 179258 ------TTGTCTCTTGTCCCTGAAACGGCCACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550232 27 - 5823884 ------TTGTCTCTTGTCCCTGAAACAGCCATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32812 27 + 372756 ------TTGTTTCTTGTCCCTGGAACAGCCATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270300 27 + 16356641 ------TTGTTTCTTGTCCCTGGAGCAGCCGTG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2669396 27 + 11732439 ------TTGCTTCTTGTCCCTGGAACAGCCATG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22834230 26 + 22939663 ------TTTTCTCTTGTCCCTGGAAGAGCCAG- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181782356 26 + 182113224 ------ctctctctctctcctggaACACCCAT- i mm10.chr2 I 341 C 0 s canFam3.chr24 47595246 27 + 47698779 ------CTATCCCTCATCCCTGGGACAGCCACA i canFam3.chr24 I 4 C 0 s dasNov3.JH569290 233490 29 - 397369 GGGCTCATTTCTCTGGTCCCTGAAACATG---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1846776 292 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56853303 252 + 57149010 I e cebCap1.NW_016107870v1 1139282 54 + 1231380 I a score=780311.000000 s hg38.chr20_KI270870v1_alt 98490 87 + 183433 GAGCCATGACCTTGTCTGTTTCTCCGGTGGATTCCAGGAAATAGGCATTGAATATATGATG-TTAAAAAAGTGCCTCAAGTTTCTCAC s panTro5.chr20 66425307 87 + 66533130 GAGCCATGACCTTGTCTGTTTCTCCGGTGGATTCCAGGAAATAGGGATTGAATATATGATG-TTAAAAAAGTGCCTCAAGTTTCTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100452 87 + 62195757 GAGCCATGACCTTGTCTGTTTCTCCGGTGGATTCCAGGAAATAGGGATTGAATATATGATG-TTAAAAAAGTGCCTCAAGTTTCTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489796 87 - 578057 GAGCCATGACCTTGTCTGTTTCTCCAGTGGATTCCAGGAAATAGGGATTGAATATATGATG-TTAGAAAAGTGCCTCAAGTTTCTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110013974 88 - 110113093 GAGCCATGACCTTGTCTGTTTTTCCAGTGGATTCCAGGAAATAGGGATTGAATATACGATGTTTAAAAAAGTGTCCCAAGTTTCTCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739210 88 - 92844088 GAGCCATGACCTTGTCTGTTTTTCCGGTGGCTTCCAGGAAATGGGGGTTGAATATATGATGTTTAAAAAAGTGCCCCAAGTTTCTCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407260 88 + 96509753 GAGCCATGACCTTGTCTGTTTTTCCGGTGGCTTCCAGGAAATGGGGGTTGAATATATGATGTTTAAAAAAGTGCCCCAAGTTTCTCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878246 88 - 16982598 GAGCCATGACCTTGTCTGTTTTTCCGGTGGCTTCCAGGAAATGGGGGTTGAATATATGATGTTTAAAAAAGTGCCCCAAGTTTCTCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680136 88 - 3785965 GAGCCATGACCTTGTCTGTTTTTCTGGTGGATTCCAGGAAATGGGGGTTGAATATATGATGTTTAAAAAAGTGCCCCAAGTTTCTCAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64733 88 - 179258 GAGCCATGACCTTGTCTGTTTTTCTGGTGGATTCCAGGAAATGGGGGTTGAATATATGATGTTTAAAAAAGTGCCCCAAGTTTCTCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550259 88 - 5823884 GAGCCATGACTTTGTCTGTTTATCCGGTGGATTCCAGGAAATGGGGGTTGAATATATGATGTTTAAAAAAGTGCCCCAAGTTTCTCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32839 88 + 372756 GAGCCATGACCTTGTCTGTTGCTCCATTAGATTTCAGAAAATAGGGATTGAATGTATGATGTATAAAAAAGTACCCCAAGCTTCTCAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270327 87 + 16356641 GAGCCGTGACCTTGTCCGTTGTTCTATTAGGTTTCTGAAAATAGGGATTGAATGTATGATGTAT-GACAAGTGCCCCAAGCCTCTCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139336 87 + 1231380 GAGCCATGACCTTGTCCGTTGTTCCATTAGATTTCAGAAAATAGGGATTGAATGTATGATGTAT-GAAAAGTGCCCCAAGCCTCTCAC i cebCap1.NW_016107870v1 I 54 C 0 s aotNan1.NW_018500483v1 2669423 88 + 11732439 GAGCCATGACCTTGTCTGTCGTTCCATTAGATTTCAGAAAATAGGGATTGAATGTATGATGTATAAAAGAGTGCCCCAAGCCTCTCAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22834256 84 + 22939663 GGGTCATGATCTTGTCCATTTTTCTGGTTG-CTCCATAAAGGAGAGGCTGTATAAATGCC--TTGTGAAAATGGCCCCAGTGCCTTA- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181782382 82 + 182113224 GAGCAGTGAATTTGTTTGTCTTTCAGATAGATTCCAGAGATTGTGC------TGTGCTACATTTAAAAGTGTCCTGCATTTTTTTTTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47595273 88 + 47698779 GGGCCTCGACTTTGCCCATCGTTCTGGTGGATTCCAGAAAGGAGGGATTGCATCAACACTGTGGAAAAGAGCCGTCCAAGTTTCTCCG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 233519 58 - 397369 GGGCTGCTGACTTG---------------GTTTCCAGAAAGGTGGGGCTGTGTGAATG--------GGATGTGCCTCCTGC------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1846776 292 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56853303 252 + 57149010 I a score=17290.000000 s hg38.chr20_KI270870v1_alt 98577 1 + 183433 T s panTro5.chr20 66425394 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100539 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489883 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014062 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739298 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407348 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878334 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680224 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64821 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550347 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32927 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270414 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139423 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669511 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56853555 1 + 57149010 T i micMur3.chr18 I 252 C 0 s otoGar3.GL873542 22834340 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181782464 1 + 182113224 T i mm10.chr2 C 0 C 0 s canFam3.chr24 47595361 1 + 47698779 T i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 233577 1 - 397369 T i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1846776 292 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=340913.000000 s hg38.chr20_KI270870v1_alt 98578 27 + 183433 TTCTCCCCTTGAGCCAGCACGGCTGGC---- s panTro5.chr20 66425395 27 + 66533130 TTCTCCCCTTGAGCCAGCACGGCTGGC---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100540 27 + 62195757 TTCTCCCCTTGAGCCAGCACGGCTGGC---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489884 27 - 578057 TTCTCCCCTTGAGCCAGCACGGCTGGC---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014063 27 - 110113093 TTCTCCCCTTGAGCCAGCACGGCTGGC---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739299 27 - 92844088 TTCTCCCCTTGAGCCAGCATGGCTGGC---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407349 27 + 96509753 TTCTCCCCTTGAGCCAGCATGGCTGGC---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878335 27 - 16982598 TTCTCCCCTTGAGCCAGCATGGCTGGC---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680225 27 - 3785965 TTCTCCCCTTGAGCCAGCATGGCTGGC---- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64822 27 - 179258 TTCTCCCCTTGAGCCAGCATGGCTGGC---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550348 27 - 5823884 TTCTCCCCTTGAGCCAGCATGGCTGGC---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32928 27 + 372756 TTTTCCTCTTGAGCCAGTGTGGCTGGC---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270415 27 + 16356641 TCTTCCTCTTGAGCCAGTGTGGCTGCC---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139424 27 + 1231380 TTTTCCTCTTGAGCCAGTGTGGCTGGC---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669512 27 + 11732439 TTTTCCTCTTGAGCCAGTGTGGCGGGC---- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56853556 26 + 57149010 TTCTCCCCTGGAGCCAGCAT-GCTGGC---- i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1847068 27 - 2029793 TTCTCTCCTTGGGCCAGCTCGGTTGGC---- i proCoq1.NW_012150197v1 I 292 C 0 s otoGar3.GL873542 22834341 26 + 22939663 TTCTCCCCT-GAGCCAGCATGTCTGGC---- i otoGar3.GL873542 C 0 I 226 s mm10.chr2 181782465 27 + 182113224 TTCTCTTCATGTGTCTGCCTAGCTGAT---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47595362 17 + 47698779 TTCCCCCCTTGAGCTGC-------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 233578 31 - 397369 TTCTCGACATGCACCAGCACGGCTCATCAGC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=2434758.000000 s hg38.chr20_KI270870v1_alt 98605 151 + 183433 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGAACCTTTTTAAACCCTCAGAAAATGAGTTCCGAGGTGAGCTGTTAAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACAC---CTGGGCAGACACTGCAAGGTGAG s panTro5.chr20 66425422 154 + 66533130 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGAACCTTTTTAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGTTAAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACACCTTCTGGGCAGACACTGCAAGGTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100567 154 + 62195757 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGAACCTTTTTAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGTTAAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACACCTTCTGGGCAGACACTGCAAGGTGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 489911 154 - 578057 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGAACCTTTTTAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTGAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGGCACCTTCTGGGCAGACACTGCAAGGTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014090 154 - 110113093 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGAACCTTTTTAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTAAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACACCTTCTGGGCAGGCACTGCAAGGTGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739326 153 - 92844088 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGTG-CTTTTCAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTGAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACACCTTCTTGGCAGACACTGCAAGGTGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407376 153 + 96509753 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGTG-CTTTTCAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTGAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACACCTTCTTGGCAGACACTGCAAGGTGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878362 153 - 16982598 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGTG-CTTTTCAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTGAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACACCTTCTTGGCAGACACTGCAAGGTGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680252 154 - 3785965 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGTGCCTTTTCAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTGAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACACCTTCTTGGCAGACACTGCAAGGTGAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 64849 154 - 179258 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGTGCCTTTTCAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTGAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACACCTTCTTGGCAGACACTGCAAGGTGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550375 154 - 5823884 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-ACCTTGTGCCTTTTTAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTAAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAGGACCTCAAGACACCTTCTTGGCAGACGCTGCAAGGTGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 32955 153 + 372756 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-AACTTGTATC-TTTTAAACCCTCAGAAAATGAGTTCCAGGGTGAGCTGCTAAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAAGACCTCAAGACCCCTCCTGGGCAGACCCTGCAAGGTGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270442 154 + 16356641 ACCCACCAAGCTT------------------------------------------TCCTTTTCTG-AACCTGTATCTTTTTAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTAAATCAGAGGTGGACACACGGAGGCCAGGCCAGCAGCTGCCAAACCTCAAGACCCCTCCTGGGCAGACCCTGCAAGGTGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139451 154 + 1231380 ACCCACCAGGCTT------------------------------------------TCCTTTTCTG-AACTTGTATCTTTTTAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTAAATCAGAGGTGGACTCACGGAGGCAAGGCCAGCAGCTGCAAAACCTCAAGACACCTCCTGGGCAGACCCTGCAAGGTGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669539 155 + 11732439 ACCCACCAAGCTT------------------------------------------TCCTTTTCTGAAACGTGTATCTTTTTAAACCCTTAGAAAATGAGTTCCGGGGTGAGCTGCTAAATCAGAGGTGGACACACGGAGGCAAGGCCAGCAGCTGCAAGACCTCAAGACCCCTTCTGGGCAGACCTTGCAAGGTGAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56853582 154 + 57149010 TCTCCCCAGGCTT------------------------------------------CCCTTTTCTG-ACCCTGTATCTTTCTAAATCCTCAGAAAATGAGTTCCGGGGTGAACTGCTAAACCAAAGGTGGACACACAGAGGCCAGGCCAGCAGCTGCAGGACCTCGAGACGCCTCCCGGGCAGACACGGCAAGGTGAG i micMur3.chr18 C 0 I 591 s proCoq1.NW_012150197v1 1847095 154 - 2029793 TCTCCTCAGGCTT------------------------------------------CCCTTTTCTG-ACCCTGTATCTTTCTGAATCCTCAGAAAATGAGTTCCGGGGTGAACTGCTAAACCAAAGGTGGACACACGGAGGCCAGGCCAGCAGCTGCAGGACCTCGAGACACCTCCCGGGCAGACGCAGCAAGGTGAG i proCoq1.NW_012150197v1 C 0 I 2 s otoGar3.GL873542 22834593 196 + 22939663 acccgccagccttggtaggtggctggcgccctactcactgagctgcgggAGCTTCCCCTTTTCTG-ACCCTGTATCTTTTTAAATTCTCAGAAAATGAGTTCCGGGGTGAGCTGCTAAACCAGAGGTGGACACACGGAAGCAAGGCCAGCAGCTGTAGGACCTCAAGACACCTCCTAGGCAGACACAGCAAGGTGAG i otoGar3.GL873542 I 226 I 2 s mm10.chr2 181782492 154 + 182113224 ATTTGTCAGAATT------------------------------------------CCCTTTTCTG-AACTTCTATTCTTTTAAATCCTCAGAAAATGAGTTCCGGGGCAAACTTCTGACCCAGAGGTGGACACAGGAAGACAAGACTAGTAGCTGCAGAACTGAGAGACATTTCCTGTGTAGATACAACAAGGTAAG i mm10.chr2 C 0 I 175 s canFam3.chr24 47595379 137 + 47698779 CTTCATTAGGTTT------------------------------------------TCTTTCTCTG------------------ACCCCCAGAAAATGAGTTCCGGGGTGAGCTGCTGAGTCAGAGGTGGACACAAGGAGACAAAGCCAGCAACTGCAGGACCTCGAGGCTCCTCCTGGGCCGACGCGGCAAGGTGAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 233609 154 - 397369 AGCCATCACGTTT------------------------------------------TCCTTCTCTG-ACCCTGTGCTTTTTCAAACCCTCAGAAAATGAGTTCCGGGGTGAGCTGCTGAGTCAAAGGTGGACACGCGAAGACAAGGCCAGTGGCTGCAGGACCTCAAAAAGCCTTCTGGGCAGACACAGCAAGGTGAG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=1929317.000000 s hg38.chr20_KI270870v1_alt 98756 185 + 183433 ACG----TGAGAGGGCAG--------------CCCCTGTCGTA----GGGCCCCACCCCATGGCTGCCTGCACAAAGCCTCTCTTCAGCT-GCAGGCATGAAGCAT-------GGAGGCGACTTTTGGTCTGATCCTCACCAGAGTCCGGGTTAGGTGAAGGG-TAAATGGGGACTAGGATCAGCAATGATCCGGTCACTTTAAAATTAAGGGAAG s panTro5.chr20 66425576 185 + 66533130 ACG----TGAGAGGGCAG--------------CCCCTGTCGTA----GGGCCCCACCCCATGGCTGCCTGCACGAAGCCCCTCTTCAGCT-GCAGGCATGAAGCAT-------GGAGGCGACTTTTGGTCTGATCCTCACCAGAGTCCGGGTTAGGTGAAGGG-TAAATGGGGACTAGGATCAGCAATGATCTGGTCACTTTAAAATTAAGGGAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100721 185 + 62195757 ACG----TGAGAGGGCAG--------------CCCCTGTCGTA----GGGCCCCACCCCATGGCTGCCTGCACGAAGCCCCTCTTCAGCT-GCAGGCATGAAGCAT-------GGAGGCGACTTTTGGTCTGATCCTCACCAGAGTCTGGGTTAGGTGAAGGG-TAAATGGGGACTAGGATCAGCAATGATCTGGTCACTTTAAAATTAAGGGAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490065 185 - 578057 ACG----TGAGAGGGCAG--------------CCCCCGTCGTA----GGGCCCCAGCCCACGGCTGCCTGCACAAAGCCTCTCTTCAGCT-GCAGGCATGAAGCAT-------GGAGGCGACTTTTGGTCTGATCCTCACCAGAGTCCAGGTTAGGTGAAGGG-TAAATGGGGACTAGGATCAGCAATGATCTGGTCACTTTAAAATTAAGGGAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014244 185 - 110113093 GCA----TGAGAGGGCAG--------------CCCCTGTCACA----GGGCCCCACCCCATGGCTGCCTGCACAAAGCCTCTCTTCAGCT-GCAGGCATGAAGCAT-------GGAGGCAACTTTTGGTCTGATCCTCACCAGAGTCCAGGTTAGGTGAAGGG-TAAATGGAGACTAGGATCAGCAATGATCTGGTCACTTTAAAATTAAGGGAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739479 185 - 92844088 GCG----TGAGAGGGCAG--------------CCCCTGTCTTG----GGGCCCCACCCCGTGGCTGCCTGCAGAAAGCCTCTCGTTGGCT-GCAGGCGTGAAGCGT-------GGAGACGACTTTGGGTCTGATCCTCACCAGAGTCCAGGTTAGGCGAAGGG-AAAATGGGGACTAGGATCAGCAATGCTCTGGTCACTTTAGAATTAAGGGAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407529 185 + 96509753 GCG----TGAGAGGGCAG--------------CCCCTGTCCTG----GGGCCCCACCCCGTGGCTGCCTGCAGAAAGCCTCTCGTTGGCT-GCAGGCGTGAAGCGT-------GGAGACGACTTTGGGTCTGATCCTCACCAGAGTCCAGGTTAGGCGAAGGG-AAAATGGGGACTAGGATCAGCAATGCTCTGGTCACTTTAGAATTAAGGGAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878515 185 - 16982598 GCG----TGAGAGGGCAG--------------CCCCTGTCCTG----GGGCCCCACCCCGTGGCTGCCTGCAGAAAGCCTCTCGTTGGCT-GCAGGCGTGAAGCGT-------GGAGACGACTTTGGGTCTGATCCTCACCAGAGTCCAGGTTAGGTGAAGGG-AAAATGGGGACTAGGATCAGCAATGCTCTGGTCACTTTAGAATTAAGGGAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680406 185 - 3785965 GCG----TGAGAGGGCAG--------------CCCCTGTCCTG----GGGCCCCACCCCGTGGCTGCCTGCAGAAAGCCTCTCGTTGGCT-GCAGGCGTGAAGCGT-------GGAGACGACTTTGGGTCTGATCCTCACCAGAGTCCAGGTTAGGCGAAGGG-AAAATGGGGACTAGGATCAGCAATGCTCTGGTCACTTTAGAATTAAGGGAAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65003 185 - 179258 GCG----TGAGAGGGCAG--------------CCGCTGTCCTG----GGGCCCCACCCCGTGGCTGCCTGCAGAAAGCCTCTCGTTGGCT-GCAGGCGTGAAGTGT-------GGAGACGACTTTGGGTCTGATTCTCACCAGAGTCCAGGTTAGGCGAAGGG-AAAATGGGGACTAGGATCAGCAATGCTCTGGTCACTTTAGAATTAAGGGAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550529 185 - 5823884 GCA----TGAGAGGGCAG--------------CCCCTGTCCTG----GGGCCCCACCCCATGGCTGCCTGCAGAAAGCCTCTCTTTGGCT-GCAGGCATGAAGCAT-------GGAGACGACTTTGGGTCTGATCCTCCCCAGAGTCCAGGTTAGGCGAAGGA-TAAATCGGGACTAGGATCAGCAATGATCTGGTCACTTTAGAATTAAGGGAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 33108 185 + 372756 GCA----CTAGACGGCGG--------------CCCCTGTCCTG----GGGCTCCACCACGTGGTTGCCTGCACAAAGCCTCTCCTCGGCC-GCAGGCACAAAGCGC-------GGAGGTGACTTTTGGTCTGATTATCACCAGAGTCCAGGTCAGGTGAAGGG-TAAATGGGGACCAGGATCAGCAATGATCTGGTAACTTTAAAATTAAGGGAAG i calJac3.chrUn_GL286459 C 0 I 312 s saiBol1.JH378156 16270596 183 + 16356641 GTG----CTAGAGAGCGG---------------CCCTGTCCT-----GGGCTCCACCCCATGGTTGCCTGCACAAAGCCTCTCCTCGGCC-GCAGGTGTGAAGCGT-------GGAGGCGACTTTTGGTGTGATCCTCACCAGAGTCCAGGTCAGGTGAAGGG-TAAATGGGGACCAGGATCAGCAATGATCTGGTAACTTTAAAATTAAGGAAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139605 183 + 1231380 GCA----CTAGAGGGCGG--------------CCCCTGTCCTG----GGGCTCCACCCCGCGGTTGCCTG-ACAAAGCCTCTCCTCGGCC-GCAGGCATGAAGCGT-------GGAGGCGGCTTTTGGTCTGATCATCACCAGAGTCCAGGTCAGGTGAAGGG-TAAAC-GGGACCAGGGTCAGCAGTGATCTGGTAACTTTAAAATTAAGGGAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669694 183 + 11732439 GCA----CTAGAGGGCGG---------------CCCCGTCCT-----GGGCTCCACCCCATGGTTGCCTGCACAAAGCCTCTCCTCGGCC-GCAGGCATGAAGCGT-------GGAGGCGACTTTTGGTCTGATCATCACCAGAGTTCAGGTCAGGTGAAGGG-TAAATGGGCACCAGGATCAGCAATGATCTGGTAACTTCAAAATTAAGGGAAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1847251 183 - 2029793 -AC----TCAGAGGGCAG---------------CCTTGTGCTG----GGGCCTCACCGCA-GGCTGCCTGTGCAAAGCCTCTTCTTGGTTCTTAGGCATGACATAC-------GGAGGTGACTTTTGGTCTAATCATCTTCAAAATCCAGGTTAGGCGAAGCA-TAAATGGGGACTAGGACCATCAGTGATCTTGTCACTTTAAAATTCAAGGAAG i proCoq1.NW_012150197v1 I 2 C 0 s otoGar3.GL873542 22834791 184 + 22939663 -AC----TCGGAGGT--G---------------GCCTGTACTG----AACACACA---CA-GGCTGCCTGTGCAAAGCTTCTTCTTGGTTCCCAGGCATGAAGCACAAAGTGAGGAGGTGACTTTTGGTCTAATCATCATCAAAGATTAGATTAGGTGAAGGA-TAAATGGAGATTA-GATCATCAATGATCTAGTCACTTTAAAATTAAAGGAAG i otoGar3.GL873542 I 2 C 0 s canFam3.chr24 47595516 186 + 47698779 GCGC---TTGGAGGGCAG--------------CCCCTTCCCTGCCACCTGCCCCCCGCCCTGG--GTCTGGGCAGGGCTCCTTCTCACTT-CCAAGCATGGGGCAC-------GGAGGTGACTTTT-GTCTGGTCACCAC--GAGTCTAGGGTAGACAGAGGGTTACATGGGGGCTAGGACCATCAGTGATCTGGTCACTGTGAACCTTAAGGAAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 233763 168 - 397369 ---GCACTCAGAGGGTAGGGGTCTGCGCAGAACCCCT---CTG----GGGCCCCCCGATA-AGCTGTCCATGCAAAGTTCTTCTCAGCTC-CCAGGCATCAAACAC-----------------------------------AGAGTCCAGATCTGGCGAAAGA-TAAATGGGAAATAGGACAATCAATGTTCTGATCACTTTAACACTAAAGGAAG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I a score=7847.000000 s hg38.chr20_KI270870v1_alt 98941 1 + 183433 A s panTro5.chr20 66425761 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100906 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490250 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014429 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739664 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407714 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878700 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680591 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65188 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550714 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 33605 1 + 372756 a i calJac3.chrUn_GL286459 I 312 C 0 s proCoq1.NW_012150197v1 1847434 1 - 2029793 A i proCoq1.NW_012150197v1 C 0 I 376 s canFam3.chr24 47595702 1 + 47698779 A i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 233931 1 - 397369 G i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e saiBol1.JH378156 16270779 0 + 16356641 C e cebCap1.NW_016107870v1 1139788 0 + 1231380 C e aotNan1.NW_018500483v1 2669877 0 + 11732439 C e otoGar3.GL873542 22834975 0 + 22939663 C a score=252721.000000 s hg38.chr20_KI270870v1_alt 98942 39 + 183433 AAAA---TGACTCTGAGTAGATCAAAACTAAAATGTGACCCC s panTro5.chr20 66425762 39 + 66533130 AAAA---TGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100907 39 + 62195757 AAAA---TGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490251 39 - 578057 AAAA---TGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014430 39 - 110113093 AAAA---TGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739665 42 - 92844088 AAAACGGCGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407715 42 + 96509753 AAAACGGCGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878701 42 - 16982598 AAAACGGCGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680592 42 - 3785965 AAAACGACGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65189 42 - 179258 AAAACGACGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550715 42 - 5823884 AAAACGACGACTCTGAGTAGATCAAAACTAAAATGTGACCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 33606 39 + 372756 aaAA---TGACTCTGAGCAGATCAAAACTAACATGTGACCCC i calJac3.chrUn_GL286459 C 0 T 352 s canFam3.chr24 47595703 39 + 47698779 AAAA---TGACTCTGAATAGAGTGAAACTAAAATATGACAGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 233932 36 - 397369 AAGA---TGACTTGGAATTGAATGAAACTAAATAgggag--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e saiBol1.JH378156 16270779 0 + 16356641 C e cebCap1.NW_016107870v1 1139788 0 + 1231380 C e aotNan1.NW_018500483v1 2669877 0 + 11732439 C e otoGar3.GL873542 22834975 0 + 22939663 C a score=156601.000000 s hg38.chr20_KI270870v1_alt 98981 16 + 183433 Agg-------ctg-ggcccggtgg s panTro5.chr20 66425801 16 + 66533130 Agg-------ctg-ggcccggtgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100946 16 + 62195757 Agg-------ctg-ggcccggtgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490290 16 - 578057 Agg-------ctg-ggcccggtgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014469 16 - 110113093 Agg-------ctg-ggcccggtgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739707 16 - 92844088 Agg-------ccg-ggcgcggtgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407757 16 + 96509753 Agg-------ccg-ggcgcggtgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878743 16 - 16982598 Agg-------ccg-ggcgcggtgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680634 16 - 3785965 Agg-------ccg-ggcgcagtgg i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65231 16 - 179258 Agg-------ccg-ggcgcggtgg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550757 16 - 5823884 Agg-------ctg-ggcgcggtgg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 33293 16 + 372756 Agg-------cca-ggcgcagtgg i calJac3.chrUn_GL286459 T 352 C 0 s saiBol1.JH378156 16270779 16 + 16356641 Agg-------cca-ggcgcagttg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139788 16 + 1231380 Agg-------cca-ggcgcagcgg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669877 16 + 11732439 Agg-------ccg-ggcgcagtgg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22834975 16 + 22939663 Agg-------ctg-gatgcattgg i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47595742 23 + 47698779 AGGGTGTTGCCTG-GGCCAGGTGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 233968 17 - 397369 aga-------atgtggcccagtgg i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I a score=23880.000000 s hg38.chr20_KI270870v1_alt 98997 2 + 183433 ct s panTro5.chr20 66425817 2 + 66533130 ct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100962 2 + 62195757 ct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490306 2 - 578057 ct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014485 2 - 110113093 ct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739723 2 - 92844088 ct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407773 2 + 96509753 ct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878759 2 - 16982598 ct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680650 2 - 3785965 ct i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65247 2 - 179258 ct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550773 2 - 5823884 ct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 33309 2 + 372756 ct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270795 2 + 16356641 ct i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139804 2 + 1231380 ct i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669893 2 + 11732439 ct i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22834991 2 + 22939663 ct i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 233985 2 - 397369 tt i dasNov3.JH569290 C 0 I 46 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I a score=88029.000000 s hg38.chr20_KI270870v1_alt 98999 8 + 183433 cacacctg s panTro5.chr20 66425819 8 + 66533130 cacacctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100964 8 + 62195757 cacacctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490308 8 - 578057 cacacctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014487 8 - 110113093 cacacctg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92739725 8 - 92844088 cacacctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407775 8 + 96509753 cacacctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878761 8 - 16982598 cacacctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680652 8 - 3785965 cacacctg i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65249 8 - 179258 cacacctg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550775 8 - 5823884 cacacctg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 33311 8 + 372756 cacacctg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16270797 8 + 16356641 cacgcctg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1139806 8 + 1231380 cacgcctg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2669895 8 + 11732439 cacgcctg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22834993 8 + 22939663 cacacctg i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I a score=579823.000000 s hg38.chr20_KI270870v1_alt 99007 118 + 183433 taatcccagcactttgggaggctgaggcaggtggatcacttgaggtcaagagttcaagaccagcctggccaacatggtgaaaccccgtctttactaaaaacacaaaaattagccggg---c- s rheMac8.chr10 92739733 117 - 92844088 taatcccagcactttgggaggctgaggcaggtgaatcacttgaggtcaagagttccagaccagcccggccaacatggtgaaaccccgtctttactaaaaatacaaaaattagccggg----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407783 117 + 96509753 taatcccagcactttgggaggctgaggcaggtgaatcacttgaggtcaagagttccagaccagcccggccaacatggtgaaaccccgtctttactaaaaatacaaaaattagccggg----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878769 117 - 16982598 taatcccagcactttgggaggctgaggcaggtgaatcacttgaggtcaagagttccagaccagcccggccaacatggtgaaaccccgtctttactaaaaatacaaaaattagccggg----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680660 118 - 3785965 taatcccagcactttgggaggctgaggcaggtgaatcagttgaggttaagagttccagaccagcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaattagccgggc---- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65257 118 - 179258 taatcccagcactttgggaggctgaggcaggtgaatcacttgaggtcaagagttccagaccagcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaattagccggg-c--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550783 118 - 5823884 taatcccagcaccttgggaggctgaggcaggtgaatcacttgaggtcaagagttccagaccagcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaattagccggg--c-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 33319 115 + 372756 taatcccagcactttgggaggctgaggtgggtggatcac--aaggtcaggagttcaggaccagcctgaccaacatggtgaaaccccatctctactaaaaatacagaaattagctggg----- i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16270805 115 + 16356641 taatcccagcactttgggaggctgaggcggatggatcac--aaggtcaggagttcaggaccagcctgaccaacatagtgaaaccctatctctactaaaaatacaaaaattagccggg----- i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1139814 115 + 1231380 taatcccagcactttgggaggctgaggcgggtggatcac--aaggtcaggagttcaggaccagcctgacgaacatggtgaaaccccatctctactaaaaatacaaaaattagccggg----- i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2669903 115 + 11732439 taatcccagcactttgggaggctgaggcgggtggatcac--aaggtcaggagttcaggaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccagg----- i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22835001 105 + 22939663 taatcacagtgctttgggaggc-------------ttgcttgaggccaggagttcaagaccagtctgagcaacatagtgagacccagtctctacaaaaaatagaaaaattaattggg----t i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e panPan2.chr20 62100972 0 + 62195757 C e gorGor5.CYUI01015848v1 490316 0 - 578057 C e panTro5.chr20 66425827 0 + 66533130 C e nomLeu3.chr13 110014495 0 - 110113093 C a score=45256.000000 s hg38.chr20_KI270870v1_alt 99125 29 + 183433 atggtggcatgcgcctgtaatcccagcta s rheMac8.chr10 92739850 15 - 92844088 --------------ctgtagttccagcta i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407900 15 + 96509753 --------------ctgtagttccagcta i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878886 15 - 16982598 --------------ctgtagttccagcta i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 33435 29 + 372756 gtggtgataggtgcctgtaatcccagctt i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16270921 29 + 16356641 gtggtgataggtgcctgtaatcccagcta i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1139930 29 + 1231380 atggtgataggtgcctgtagtcccaacta i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2670019 29 + 11732439 gtggtgacaggtgcctgtaatcccagcta i aotNan1.NW_018500483v1 I 1 I 203 s otoGar3.GL873542 22835106 27 + 22939663 gtcatgacacgc--ctgtagtcccaacta i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e cerAty1.NW_012001373v1 3680778 0 - 3785965 C e colAng1.NW_012114444v1 5550901 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e panPan2.chr20 62100972 0 + 62195757 C e gorGor5.CYUI01015848v1 490316 0 - 578057 C e manLeu1.NW_012101652v1 65375 0 - 179258 C e panTro5.chr20 66425827 0 + 66533130 C e nomLeu3.chr13 110014495 0 - 110113093 C a score=166151.000000 s hg38.chr20_KI270870v1_alt 99154 96 + 183433 tttgggggaggatcccagctaaggtgggaggatcacttgagcctgggaagtcaaggctgcagtgagctgagattgtgccactgcactccagcctgg s rheMac8.chr10 92739865 87 - 92844088 ctcgagag---------gctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgacccaagattgtgccactgcactccagcctgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96407915 87 + 96509753 ctcgagag---------gctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgacccaagattgtgccactgcactccagcctgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878901 87 - 16982598 ctcgagag---------gctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgacccaagattgtgccactgcactccagcctgg i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 33464 87 + 372756 cttggaag---------gccgaggcaggagaatcagttgaacccgggaggcggaggttgcagtgagctgagatcacaccactgcactccagcctgg i calJac3.chrUn_GL286459 C 0 I 8 s saiBol1.JH378156 16270950 87 + 16356641 ctcggaag---------gctgaggcaggagaatcagttgaacccaggaggcggaggttgcaatgagctgagatcacaccactgccctccagcctgg i saiBol1.JH378156 C 0 I 6 s cebCap1.NW_016107870v1 1139959 87 + 1231380 ctcagaag---------gctgaggcaggagaatcagttgaacccaggaggcggaggttgcagtgagctgagatcacaccactgcactccagcctgg i cebCap1.NW_016107870v1 C 0 I 96 s otoGar3.GL873542 22835133 87 + 22939663 cttgggag---------gctgaggtagaaggatctcttaagcccaggtgctggaggctgcagtgagctgtgatgctgctgctgtaccccagcctag i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e cerAty1.NW_012001373v1 3680778 0 - 3785965 C e colAng1.NW_012114444v1 5550901 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e panPan2.chr20 62100972 0 + 62195757 C e gorGor5.CYUI01015848v1 490316 0 - 578057 C e manLeu1.NW_012101652v1 65375 0 - 179258 C e aotNan1.NW_018500483v1 2670048 203 + 11732439 I e panTro5.chr20 66425827 0 + 66533130 C e nomLeu3.chr13 110014495 0 - 110113093 C a score=2463.000000 s hg38.chr20_KI270870v1_alt 99250 3 + 183433 ------gtg s rheMac8.chr10 92739952 3 - 92844088 ------gtg i rheMac8.chr10 C 0 I 131 s macFas5.chr10 96408002 3 + 96509753 ------gtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16878988 3 - 16982598 ------gtg i macNem1.NW_012014244v1 C 0 I 73 s calJac3.chrUn_GL286459 33559 3 + 372756 ------gag i calJac3.chrUn_GL286459 I 8 C 0 s saiBol1.JH378156 16271043 3 + 16356641 ------gag i saiBol1.JH378156 I 6 C 0 s otoGar3.GL873542 22835220 9 + 22939663 gctatagag i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e cerAty1.NW_012001373v1 3680778 0 - 3785965 C e colAng1.NW_012114444v1 5550901 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e panPan2.chr20 62100972 0 + 62195757 C e gorGor5.CYUI01015848v1 490316 0 - 578057 C e manLeu1.NW_012101652v1 65375 0 - 179258 C e cebCap1.NW_016107870v1 1140046 96 + 1231380 I e aotNan1.NW_018500483v1 2670048 203 + 11732439 I e panTro5.chr20 66425827 0 + 66533130 C e nomLeu3.chr13 110014495 0 - 110113093 C a score=4096.000000 s hg38.chr20_KI270870v1_alt 99253 18 + 183433 c-------agaTCTTATCTCAGAAG s macFas5.chr10 96408005 25 + 96509753 acagagcaagactccatctcaaaaa i macFas5.chr10 C 0 C 0 s calJac3.chrUn_GL286459 33562 19 + 372756 ------caagactcagtctaaaaaa i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271046 13 + 16356641 ------caagactcagtct------ i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22835229 19 + 22939663 ------caagaccctgtctaaaaag i otoGar3.GL873542 C 0 I 496 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e cerAty1.NW_012001373v1 3680778 0 - 3785965 C e colAng1.NW_012114444v1 5550901 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e panPan2.chr20 62100972 0 + 62195757 C e gorGor5.CYUI01015848v1 490316 0 - 578057 C e manLeu1.NW_012101652v1 65375 0 - 179258 C e macNem1.NW_012014244v1 16878991 73 - 16982598 I e cebCap1.NW_016107870v1 1140046 96 + 1231380 I e aotNan1.NW_018500483v1 2670048 203 + 11732439 I e panTro5.chr20 66425827 0 + 66533130 C e nomLeu3.chr13 110014495 0 - 110113093 C e rheMac8.chr10 92739955 131 - 92844088 I a score=-1644.000000 s hg38.chr20_KI270870v1_alt 99271 8 + 183433 T------------------------------------AAAGGGA s macFas5.chr10 96408030 44 + 96509753 acaagcaagcaagcaagcaagcaaacaaAAACCACCAAAATGgg i macFas5.chr10 C 0 C 0 s calJac3.chrUn_GL286459 33581 22 + 372756 a-----------------aaaaaaaaaaaaat-----taaggaa i calJac3.chrUn_GL286459 C 0 I 45 s saiBol1.JH378156 16271059 21 + 16356641 ------------------aaaaaaaaaaaaat-----taaggga i saiBol1.JH378156 C 0 I 45 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e cerAty1.NW_012001373v1 3680778 0 - 3785965 C e colAng1.NW_012114444v1 5550901 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e panPan2.chr20 62100972 0 + 62195757 C e gorGor5.CYUI01015848v1 490316 0 - 578057 C e manLeu1.NW_012101652v1 65375 0 - 179258 C e macNem1.NW_012014244v1 16878991 73 - 16982598 I e cebCap1.NW_016107870v1 1140046 96 + 1231380 I e aotNan1.NW_018500483v1 2670048 203 + 11732439 I e panTro5.chr20 66425827 0 + 66533130 C e nomLeu3.chr13 110014495 0 - 110113093 C e rheMac8.chr10 92739955 131 - 92844088 I e otoGar3.GL873542 22835248 496 + 22939663 I a score=3138.000000 s hg38.chr20_KI270870v1_alt 99279 9 + 183433 CTAGGAATg s macFas5.chr10 96408074 9 + 96509753 ccgggcgcg i macFas5.chr10 C 0 C 0 s calJac3.chrUn_GL286459 33648 9 + 372756 ctgggtgtg i calJac3.chrUn_GL286459 I 45 C 0 s saiBol1.JH378156 16271125 8 + 16356641 ctgggtgc- i saiBol1.JH378156 I 45 C 0 s cebCap1.NW_016107870v1 1140142 9 + 1231380 ctgggtgtg i cebCap1.NW_016107870v1 I 96 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e cerAty1.NW_012001373v1 3680778 0 - 3785965 C e colAng1.NW_012114444v1 5550901 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e panPan2.chr20 62100972 0 + 62195757 C e gorGor5.CYUI01015848v1 490316 0 - 578057 C e manLeu1.NW_012101652v1 65375 0 - 179258 C e macNem1.NW_012014244v1 16878991 73 - 16982598 I e aotNan1.NW_018500483v1 2670048 203 + 11732439 I e panTro5.chr20 66425827 0 + 66533130 C e nomLeu3.chr13 110014495 0 - 110113093 C e rheMac8.chr10 92739955 131 - 92844088 I e otoGar3.GL873542 22835248 496 + 22939663 I a score=12158.000000 s hg38.chr20_KI270870v1_alt 99288 14 + 183433 gtggcttttatctc s macFas5.chr10 96408083 14 + 96509753 gtggctcaagcctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879064 14 - 16982598 gtggctcaagtctg i macNem1.NW_012014244v1 I 73 C 0 s calJac3.chrUn_GL286459 33657 14 + 372756 gtggctcacacctg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271133 14 + 16356641 gtgactcacgcctg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140151 14 + 1231380 gtggcttacacctg i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e cerAty1.NW_012001373v1 3680778 0 - 3785965 C e colAng1.NW_012114444v1 5550901 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e panPan2.chr20 62100972 0 + 62195757 C e gorGor5.CYUI01015848v1 490316 0 - 578057 C e manLeu1.NW_012101652v1 65375 0 - 179258 C e aotNan1.NW_018500483v1 2670048 203 + 11732439 I e panTro5.chr20 66425827 0 + 66533130 C e nomLeu3.chr13 110014495 0 - 110113093 C e rheMac8.chr10 92739955 131 - 92844088 I e otoGar3.GL873542 22835248 496 + 22939663 I a score=168791.000000 s hg38.chr20_KI270870v1_alt 99302 41 + 183433 taatcccagcactttgggaggctgaggcaggtggatcactt s panTro5.chr20 66425827 41 + 66533130 taatcccagcactttgggaggctgaggcaggtggatcactt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62100972 41 + 62195757 taatcccagcactttgggaggctgaggcaggtggatcactt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490316 41 - 578057 taatcccagcactttgggaggctgaggcaggtggatcactt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014495 41 - 110113093 taatcccagtactttgggaggctgaggcaggtggatcactg i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96408097 39 + 96509753 taatcccagcactttgggaggccgagacgggcagatcac-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879078 38 - 16982598 taatcccagcacttt-ggagcccgaggcgggcggatcac-- i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 33671 41 + 372756 taatcccagcactttggaaggccaaggcaggtggattattt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271147 41 + 16356641 taatcccagcactttgagaggccaaggcaggtggatcactt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140165 41 + 1231380 taatcccagcactttgggaggccaaggcaggtggatcactt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670251 41 + 11732439 taattccagcactttcggaggccaaggcagctggatcactt i aotNan1.NW_018500483v1 I 203 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e cerAty1.NW_012001373v1 3680778 0 - 3785965 C e colAng1.NW_012114444v1 5550901 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e manLeu1.NW_012101652v1 65375 0 - 179258 C e rheMac8.chr10 92739955 131 - 92844088 I e otoGar3.GL873542 22835248 496 + 22939663 I a score=411648.000000 s hg38.chr20_KI270870v1_alt 99343 92 + 183433 gaggtca-agagttcaagaccagcctggccaacatggtgaaaccccgtctttactaa-aaacac-aaaaattagccgggcatggtggcatgcgcc s panTro5.chr20 66425868 92 + 66533130 gaggtca-agagttcaagaccagcctggccaacatggtgaaaccccgtctttactaa-aaacac-aaaaattagccgggcacggtggcacgcgcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101013 92 + 62195757 gaggtca-agagttcaagaccagcctggccaacatggtgaaaccccgtctttactaa-aaacac-aaaaattagccgggcacggtggcacgcgcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490357 92 - 578057 gaggtca-agagttcaagatcagcctggccaacatggtgaaaccccgtctttactaa-aaacac-taaaattagccgggcatggtggcacgcgcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014536 92 - 110113093 gaggtca-agaattcaagaccagcctggccaacgtggtgaaaccccatctttactaa-aaatgc-aaaaattagccgggcatggtggcacacgcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740086 94 - 92844088 gaggtca-ggagatcgagaccatcctggcgaacacggtgaaaccccgtctctactaagaaatacaaaaaactagccgggcgaggtggcgggcgtc i rheMac8.chr10 I 131 C 0 s macFas5.chr10 96408136 94 + 96509753 gaggtca-ggagatcgagaccatcctggcgaacacggtgaaaccccgtctctactaagaaatacaaaaaactagccgggcgaggtggcgggcgtc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879116 95 - 16982598 gaggtcagggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaatacaaaaaactagccgggcgtggtggcgggcgtc i macNem1.NW_012014244v1 C 0 C 0 s calJac3.chrUn_GL286459 33712 91 + 372756 gaggtca-ggagtttgggaccagcctggccaacatggtaaaa-cccatctttactaa-aaatac-aaaaattagctgtgctcagtgacacacgcc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271188 91 + 16356641 gaggtca-ggagtttgggaccagcctggccaacatggtaaaa-cccatctttactaa-aaatac-aaaaattagctgtgctcagtggcgcacgcc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140206 91 + 1231380 gaggtca-ggagtttgggaccagcctggccaacatggtaaaa-cccatttttactaa-aaatac-aaaaattagctgtgctcagtgacacatgcc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670292 91 + 11732439 gaggtca-ggagtttgggaccagcctggccaacatggtaaaa-cccatctttactaa-aaatac-gaaaattagctgcactcagtgacacacgcc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e cerAty1.NW_012001373v1 3680778 0 - 3785965 C e colAng1.NW_012114444v1 5550901 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e manLeu1.NW_012101652v1 65375 0 - 179258 C e otoGar3.GL873542 22835248 496 + 22939663 I a score=1019394.000000 s hg38.chr20_KI270870v1_alt 99435 126 + 183433 tgtaatcccagctactggggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgacccaagattgtgccactgcactccagcctgggtgacagagcaagactccatctcag s panTro5.chr20 66425960 126 + 66533130 tgtaatcccagctactggggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgacccaagattgtgccactgcactccagcctgggtgacagagcaagactccgtctcag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101105 126 + 62195757 tgtaatcccagctactggggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgacccaagattgtgccactgcactccagcctgggtgacagagcaagactccgtctcag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490449 126 - 578057 tgtaatcccagctactggggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgacccaagattgtgccactgcactccagcctgggtgacagagcaagactccatctcag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014628 126 - 110113093 tgtaatcccagctactgggaaagctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgacacaagattgtaccactgcattccagcctgggtgacagagcaagactccgtctcag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740180 126 - 92844088 tgtagtcccagctactcgggaggctgaggcaggagaatggcataaacccgggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgacagggcgagactccgtctcaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408230 126 + 96509753 tgtagtcccagctactcgggaggctgaggcaggagaatggcataaacccgggaggcggagcttgcagtgagctgagatccggccactgcactccagcctgggcgacagggcgagactccgtctcaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879211 121 - 16982598 -gta-tcccagcta-tcgggaggctga-gcaggagaatggcgtaaacccgggaggcggagcttgcagtgagctgagatcc-gccactgcactccagcctgggccgacgggcgagactccgtctcaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680778 126 - 3785965 tgtaattctagctactggggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgacccaagattgtgccactgcactccagcctgggtgacagagcaagactccatctcaa i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65375 126 - 179258 tgtagttccagctactcgggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagcaagactccatctcaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5550901 126 - 5823884 tgtagttccagctactcgggaggctgagacaggagaattgcttgaacctgggaggcagaggttgcagtgacccaagattgtgccactgcactccagcctgggtgacagagcaagactccatctcaa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 33803 126 + 372756 tataatcccacctacttaggagactgaggcaggagaatcacttgaacctgggaggcaaaggttgcagtgagccgagattgtgccactgcactccaggctgggcaacagaacaagactccatttcaa i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271279 126 + 16356641 tgtagtcccagctactcaggagactgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagattgtgccactgcattccaggctgggcaacagaacaagactccatttcaa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140297 126 + 1231380 tgtaatcccagctactcaggagactgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccgagattgtgccactgcactccagtctgggcaacagaacgagacttcatttcaa i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670383 126 + 11732439 tgcaatcccagctactcaggagactgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagccgagattgtgccattgcactccaggctggacaacagaacaagactccatttcaa i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e dasNov3.JH569290 233987 46 - 397369 I e otoGar3.GL873542 22835248 496 + 22939663 I a score=420567.000000 s hg38.chr20_KI270870v1_alt 99561 69 + 183433 a---aaacaagcaagcaag----------------caa--------acaaa-aaaaACCC-ACCAAAATGAAAATGTGACCCCAGAGTCTCACTTCCT----------- s panTro5.chr20 66426086 68 + 66533130 a---aaacaagcaagcaag----------------caa--------acaaa-aaaa-CCC-ACCAAAGTGAAAATGTGACCCCAGAGTCTCACTTCCC----------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101231 68 + 62195757 a---aaacaagcaagcaag----------------caa--------acaaa-aaaa-CCC-ACCAAAGTGAAAATGTGACCCCAGAGTCTCACTTCCC----------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490575 68 - 578057 a---aaacaagcaagcaag----------------caa--------acaaa-aaaa-CCC-ACCAAAATGAAAATGTGACCCCAGAGTCTCACTTCCC----------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014754 68 - 110113093 a---aatcaagcaagcaag----------------caa--------acaaa-aaaa-CCC-ACCAAAATGAAAATGTGACCCCAGAGTCTCACTTCCC----------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740306 66 - 92844088 aaacaaacaaacaaacaaa----------------caa--------------aaaa-acC-ACCAAAATGAAAACGTGACCCCAGAGTCTCACTTCCC----------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408356 63 + 96509753 a---aaacaaacaaacaaa----------------caa--------------aaaa-aCC-ACCAAAATGAAAACGTGACCCCAGAGTCTCACTTCCC----------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879332 63 - 16982598 a---aaaaaaaaaaaaaaa----------------aaa--------------aaca-aaC-ACCAAAATGAAAACGTGACCCCAGAGTCTCACTTCCC----------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680904 73 - 3785965 a---aTAcaagcaagcaag----------------caa----gcaagcaaacaaAA-ACC-ACCAAAATGAAAACGTGACCCCAGAGTCTCACTTCCC----------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65501 69 - 179258 a---aTACAAGCAAGCAAG----------------CAA--------GCAAACGAAA-ACC-ACCAAAATGAAAACGTGACCCCAGAGTCTCACTTCCC----------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551027 77 - 5823884 a---aaacaagcaagcaag----------------caagcaagcaaacaaacaaAA-ACC-ACCAAAAAGAAAATATGACCCCAGAGTCTCACTTCCC----------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 33929 84 + 372756 a---aaacaagcaagcaagcaagcaatcaaccaaccaa--------acaaa-aaaa-cCC-CACAAAACTAAAATGTGAACCCAGAGTCTCACTTCCC----------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271405 68 + 16356641 a---aaacgagcaagcaag----------------caa--------acaaa-aaaa-CCC-CACGAAGCTAAAATGTGAGCCCAGAGTCTCAGTTCCC----------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140423 81 + 1231380 a---aaacaagcaagcaagcaagcaaacaaa----CAA--------ACAAA-AAAA-CCCGCACAAAACTAAAATGTAAGCCCAGAGTCTCACTTCCC----------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670509 71 + 11732439 a---aaacaagcaaacaaaaaaa------------caa--------acaaa-aaaa-cC--CACAAAACTAAAATGTGAGCCCAGAGTCCCACTTCCA----------- i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 234033 68 - 397369 a---aaaaaGGTAAAAAAC----------------C----------CCAAA-CAAA-CAA-GCTAAAATGGCAA---------ATAGTTTTATCTCCCCACCAGACCCC i dasNov3.JH569290 I 46 C 0 e proCoq1.NW_012150197v1 1847435 376 - 2029793 I e canFam3.chr24 47595765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e otoGar3.GL873542 22835248 496 + 22939663 I a score=237343.000000 s hg38.chr20_KI270870v1_alt 99630 23 + 183433 TGCTTTGAGGTGTGACCACGTCT s panTro5.chr20 66426154 23 + 66533130 TGCTTTGAGGTGTGACCACGTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101299 23 + 62195757 TGCTTTGAGGTGTGACCACGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490643 23 - 578057 TGCTTTGAGGTGTGATCACGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014822 23 - 110113093 TGCTTTGAGGTATGATCACATCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740372 23 - 92844088 TGCTTTGAGGTATGATCACATCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408419 23 + 96509753 TGCTTTGAGGTATGATCACATCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879395 23 - 16982598 TGCTTTGAGGTATGATCACATCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3680977 23 - 3785965 TGCTTTGAGGTATGATCACATCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65570 23 - 179258 TGCTTTGAGGTATGATCACATCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551104 23 - 5823884 TGCTTTGAGGTATGATCACATCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34013 23 + 372756 TGCTTTGAGATAGGAGCACTTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271473 22 + 16356641 -GCTTTGAGGTGTGAGCACATCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140504 23 + 1231380 TGCTTTGAGGTATGAGCACATCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670580 23 + 11732439 TGCTTTGAGGTATCGGCACATCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1847811 23 - 2029793 TGCTTTGAGGTGTGATCGCGCCG i proCoq1.NW_012150197v1 I 376 C 0 s dasNov3.JH569290 234101 23 - 397369 TGCTTTGAGGCGTGATCACATGT i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47595765 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e otoGar3.GL873542 22835248 496 + 22939663 I a score=233003.000000 s hg38.chr20_KI270870v1_alt 99653 24 + 183433 GGGCTCTGTGATAGGCCTGAGCAA s panTro5.chr20 66426177 24 + 66533130 GGGCTCTGTGATGGGCCTGAGCAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101322 24 + 62195757 GGGCTCTGTGATGGGCCTGAGCAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490666 24 - 578057 GGGCTCTGTGATGGGCCTGAGCAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014845 24 - 110113093 GGGCTCTGTGATGTGCCTGAGCAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740395 24 - 92844088 GGGCTCTGTGTTGTGCCTGAGCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408442 24 + 96509753 GGGCTCTGTGTTGTGCCTGAGCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879418 24 - 16982598 GGGCTCTGTGTTGTGCCTGAGCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681000 24 - 3785965 GGGCTCTCTGTTGTGCCTGAGCAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65593 24 - 179258 GGGCTCTCTGTTGTGCCTGAGCAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551127 24 - 5823884 GGGCTCTGTGTTGTGCCTGAGCAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34036 24 + 372756 GGGCTCTGTGATGTGCCTGAGCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271495 24 + 16356641 GGGCTCCGTGATGTGTCTGAGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140527 24 + 1231380 GGGCCCCGTGATGTGCCTGAGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670603 24 + 11732439 GGGCTCTGTGATGTGCCTGAGAAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1847834 24 - 2029793 GGGCTCCGTCATGTGCCTCAGCAC i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47595765 19 + 47698779 GGGCTC-----TGGGTCTGGTCAC i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 234124 24 - 397369 GAGCTCCACAGTGTACCCCTGTAT i dasNov3.JH569290 C 0 I 1 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56853736 591 + 57149010 I e otoGar3.GL873542 22835248 496 + 22939663 I a score=762694.000000 s hg38.chr20_KI270870v1_alt 99677 73 + 183433 CTGTTCTCTATTCACCCTGCTTTTACCTGGCCAGGCTGAGAATCCCTACAGGATCTGACAGCAGAGATTGCTG s panTro5.chr20 66426201 73 + 66533130 CTGTTCTCTATTCACCCTGCTTTTACCTGGCCAGGCTGAGAATCCCTACAGGATCTGACAGCAGAGATTGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101346 73 + 62195757 CTGTTCTCTATTCACCCTGCTTTTACCTGGCCAGGCTGAGAATCCCTACAGGATCTGACAGCAGAGATTGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490690 73 - 578057 CTGTTCTCTATTCACCCTGCTTTTACCTGGCCAGGCTGAGAATCCCTACAGGATCTGTCAGCAGAGATTGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014869 73 - 110113093 CGGTTCTCTATTCACCCTGCATTCACCTGGGCAGGCTGAGAATCCCAACAGGATCTGACAGCAGAGATTGCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740419 73 - 92844088 CTGTTCCCTGTTCACCCTGCTTTTACCTGGGCAGGCTGAGAATCCCTACAGGATCTGACAGCAGAGATTGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408466 73 + 96509753 CTGTTCCCTGTTCACCCTGCTTTTACCTGGGCAGGCTGAGAATCCCTACAGGATCTGACAGCAGAGATTGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879442 73 - 16982598 CTGTTCCCTGTTCACCCTGCTTTTACCTGGGCAGGCTGAGAATCCCTACAGGATCTGACAGCAGAGATTGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681024 73 - 3785965 CTGTTCCCTGTTCACCCTGCTTTTACCTGGGCAGGCTGAGAATCCCTACAGGATCTGACGGCAGAGATTGTTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65617 73 - 179258 CTGTCCCCTGTTCACCCTGCTTTTACCTGGGCAGGCTGAGAATCCCTACAGGATCTGATGGCAGAGATTGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551151 73 - 5823884 CTGTTCCCTATTCACCCTGTTTTTACCTGGGCAGGCTGAGAATCCCTACAGGATCTGACAGCAGAGATTGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34060 70 + 372756 CTGTTCTCTATTCAC-TGGCTTTTACCAGGGTGGGCTGAG--TCCCTGCAGGATCTGACAGCAGAGTTTGCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271519 71 + 16356641 CTGTTCTCTATTCACTTGGCTTTTACCTGGGCAGGCTGAG--TCCCTACAGGATCTGACAGCAGAGTTTGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140551 71 + 1231380 CTGTTCTCTACTCACCTGGCTTTTACCTGGGCAGGCTGAG--TCTCTACAGGATCTGACAGCAGAGTTTGCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670627 71 + 11732439 CTGTTCTCTGTTCACCTGGCTTTTACCTGGGCAGGCTGAG--TCCCTACAGGATCTGACAGCAGAGTTTGCCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56854327 73 + 57149010 CTGTTCTTTCTTTACCGTGCTTTTACCTGGGCAGGCTGCGAGTCCCTCCAGGGTCTGACAGCAGACTTTGCTG i micMur3.chr18 I 591 C 0 s proCoq1.NW_012150197v1 1847858 71 - 2029793 CTGTTCTTCCTTTACCCTGCTTTTACCTGGGCAGGC--CGAGTCCCTTCAGGGTCTGACGGCAGCCTTTGCCG i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47595790 52 + 47698779 CTGTCCCCG-------TAGCTGCTCCCCAGGCAGGCCGAA--TGCTT------------GGTAGACTTTGCTG i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 234149 62 - 397369 CCATTCTCCATTTATCTTG---------GGCTGGGTAGAG--TCCCATCAGGCTCTGAAGGCAGATGTGGCTG i dasNov3.JH569290 I 1 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e otoGar3.GL873542 22835248 496 + 22939663 I a score=548491.000000 s hg38.chr20_KI270870v1_alt 99750 48 + 183433 GCAGGAGCTTATGAAGTCTGTTGGCC------TTGTTTTATTTCGATCTTCCTA s panTro5.chr20 66426274 48 + 66533130 GCAGGAACTTATGAAGTCTGTTGGCC------TTGTTTTATTTCGATCTTCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101419 48 + 62195757 GCAGGAACTTATGAAGTCTGTTGGCC------TTGTTTTATTTCGATCTTCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490763 48 - 578057 GCAGGAACTTATGAAGTCTGTTGGCC------TTGTTTTATTTCGATCTTCGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014942 48 - 110113093 GCAGGAACTTATGAAGTCTGTTGGCC------TTGTTTTATTTCGATCTTCCTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740492 48 - 92844088 GCAGGAACTTATGAAGTCTGTTGGCC------TTGTTTTATTTCGATCTTCCTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408539 48 + 96509753 GCAGGAACTTATGAAGTCTGTTGGCC------TTGTTTTATTTCGATCTTCCTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879515 48 - 16982598 GCAGGAACTTATGAAGTCTGTTGGCC------TTGTTTTATTTCAATCTTCCTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681097 48 - 3785965 GCAGGAACTTATGAAGTCTGTTGGCC------TTGTTTTATTTCAATCTTCCTA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65690 48 - 179258 GCAGGAACTTATGAAGTCTGTTGGCC------TTGTTTTATTTCAATCTTCCTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551224 48 - 5823884 GCAGGAACTTATGAGGTCTGTTGGCC------TTGTTTTATTTCGATCTTCCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34130 43 + 372756 GCAGGAACTTATGAGGTCTATTGGCC-----------TTATTTTGATTTTCCTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271590 43 + 16356641 GCAGGAACTTATGAGGTCTGTTGGCC-----------TTATTTTGATTTTCCTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140622 43 + 1231380 GCAGGAACTTATGAGGTCTGTTGACC-----------TTATTTTGATTTTCCTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670698 43 + 11732439 GCAGGAACTTATGAGGTCTGTTGGCC-----------TTATTTTGATTTTCCTA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56854400 54 + 57149010 GCAGGAGCTCATGAGGTCTGTTGGCCTTGGCCTTGTTCCATTCTGGTCTTCCCA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1847929 48 - 2029793 GCAGGAACTCAGGAGGCCTGTTGGGC-TGGTTTTGTTCCC-----ATCTTCCTA i proCoq1.NW_012150197v1 C 0 I 940 s otoGar3.GL873542 22835744 44 + 22939663 acaggggcc----aaaccTGTTGTCC------TTGTTTCCCTGTGATGTTCCTG i otoGar3.GL873542 I 496 C 0 s canFam3.chr24 47595842 46 + 47698779 -CGGGAGCTCACGGCATCCGTTGACC------TTGT-TTCTTTCCATCTTCCCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234211 48 - 397369 GCAGATGTGCATGAGGTCTGCTGACC------TTAGTCTATTTCAGTCTTCCTG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I a score=451757.000000 s hg38.chr20_KI270870v1_alt 99798 35 + 183433 AGGGGAGGCAGATGGTGC-----AAGCCCTTCTTATACCT s panTro5.chr20 66426322 35 + 66533130 AGGGGAGGCAGATGGTGC-----AAGCCCTTCTTATACCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101467 35 + 62195757 AGGGGAGGCAGATGGTGC-----AAGCCCTTCTTATACCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490811 35 - 578057 AGGGGAGGCAGATGGTGC-----AAGCCCTTCTTTTACCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110014990 35 - 110113093 AGGGGAGGCAGATGGTGC-----AAGCCCTCCTTATACCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740540 35 - 92844088 AGGGGAGGCAGATGGTGC-----ATGCCCTTCTTGTACCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408587 35 + 96509753 AGGGGAGGCAGATGGTGC-----ATGCCCTTCTTGTACCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879563 35 - 16982598 AGGGGAGGCAGATGGTGC-----ATGCCCTTCTTGTACCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681145 35 - 3785965 AGGGGAGGCAGATGGTGC-----ATGCCCTTCTTGTACCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65738 35 - 179258 AGGGGAGGCAGATGGTGC-----ATGCCCTTCTTGTACCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551272 35 - 5823884 AGGGGAGGCAGATGGTGC-----ATGCCCTTCTTGTACCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34173 35 + 372756 AGGGGAGGCAGATGGTGC-----ATGCCCTTCCTATACCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271633 40 + 16356641 AGGGGAGGCAGATGGTGCAGATGATGCCCTTCCTATACCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140665 35 + 1231380 AGGGGAGGCAGATGGTGC-----ATACCCTTCCTATACCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670741 35 + 11732439 AGGGGAGGCAGATGGTGC-----ATGCCCTTCCTATACCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56854454 35 + 57149010 AGTGGAGGCAGATGGTGC-----GTGCTCTTCTTGTACCT i micMur3.chr18 C 0 I 258 s otoGar3.GL873542 22835788 33 + 22939663 AGTGGAGGCAGATAGTGC-----CTGC-CTTCTC-TATCT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47595888 35 + 47698779 AGTGGGGGCAGATGGCAC-----ATGCCCTGCTCATGTCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234259 34 - 397369 -GGGGAGGCAGAGGGTGC-----ACGCCCTTCTCAGACCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I a score=71686.000000 s hg38.chr20_KI270870v1_alt 99833 7 + 183433 TCCCAGG s panTro5.chr20 66426357 7 + 66533130 TCCCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101502 7 + 62195757 TCCCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490846 7 - 578057 TCCCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015025 7 - 110113093 TCCCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740575 7 - 92844088 TCCCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408622 7 + 96509753 TCCCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879598 7 - 16982598 TCCCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681180 7 - 3785965 TCCCAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65773 7 - 179258 TCCCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551307 7 - 5823884 TCCCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34208 7 + 372756 TCCCAGA i calJac3.chrUn_GL286459 C 0 I 9 s saiBol1.JH378156 16271673 7 + 16356641 TCCCAGA i saiBol1.JH378156 C 0 I 9 s cebCap1.NW_016107870v1 1140700 7 + 1231380 TCTCAGA i cebCap1.NW_016107870v1 C 0 I 9 s aotNan1.NW_018500483v1 2670776 7 + 11732439 TCCCAGA i aotNan1.NW_018500483v1 C 0 I 51 s otoGar3.GL873542 22835821 7 + 22939663 GCCCAGA i otoGar3.GL873542 C 0 I 9 s canFam3.chr24 47595923 7 + 47698779 GCCTGGA i canFam3.chr24 C 0 I 6 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56854489 258 + 57149010 I e dasNov3.JH569290 234293 0 - 397369 C a score=375079.000000 s hg38.chr20_KI270870v1_alt 99840 55 + 183433 GTATAAGAT---------C---------TCCCTT------CGGGGACACTCCCGAA--CTGTGACATCACATGTGCTTACA s panTro5.chr20 66426364 55 + 66533130 GTATAAGAT---------C---------TCCCTT------CGGGGACACTCCCGAA--CTGTGACATCACATGTGCTTACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101509 55 + 62195757 GTATAAGAT---------C---------TCCCTT------CGGGGACACTCCCGAA--CTGTGACATCACATGTGCTTACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490853 55 - 578057 GTATAAGAT---------C---------TCCCCT------CGGGGACACTCCCGAA--CTGTGACATCACATGTGCTTACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015032 55 - 110113093 GTGTAAGAT---------C---------TCCCCT------CGGGGACACTCCCGAA--CTGTGATGTCACATGTGCTTACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740582 55 - 92844088 ATATAAGAT---------C---------TCCCCT------CGGGGACACTCCCAAA--CTGTGATATCACATGTGCTTACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408629 55 + 96509753 ATATAAGAT---------C---------TCCCCT------CGGGGACACTCCCAAA--CTGTGATATCACATGTGCTTACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879605 55 - 16982598 ATATAAGAT---------C---------TCCCCT------CGGGGACACTCCCAAA--CTGTGATATCACATGTGCTTACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681187 55 - 3785965 ATATAAGAT---------C---------TCCCCT------CGGGGACACTCCCAAA--CTGTGATATCACATGTGCTTACA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65780 55 - 179258 ATATAAGAT---------C---------TCCCCT------CGGGGACACTCCCAAA--CTGTGATATCACGTGTGCTTACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551314 55 - 5823884 ATATAAGAT---------C---------TCCCCT------CGGGGACACTCCCAAA--CTGTGATATCACATGTGCTTACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34224 54 + 372756 GGAGGGGAC---------C---------TCCCCT-------GGGGACACTCCCAAA--CTGTGATGTCACACGTGCTTATA i calJac3.chrUn_GL286459 I 9 C 0 s saiBol1.JH378156 16271689 54 + 16356641 GGAGGGGAC---------C---------TCCCCT-------CGGGACAGTCCCAAA--CTGTGATGTCACACGTGCTTACA i saiBol1.JH378156 I 9 C 0 s cebCap1.NW_016107870v1 1140716 54 + 1231380 GGAGGGGAC---------C---------CCCCCT-------GGGGACAGTCCCAAA--CTGTGATGTCACATGTGCTTACA i cebCap1.NW_016107870v1 I 9 C 0 s otoGar3.GL873542 22835837 66 + 22939663 GGAGGAGAT---------CAGCTCCCTGCCTCCC------CAGGGATACTCCCTCACCCTGGGGCATCACACAAGCTCACA i otoGar3.GL873542 I 9 C 0 s canFam3.chr24 47595936 71 + 47698779 TGATTGGGTTGACTCATGC---------TCCCTGCCTAAGCATAGATGCTCCCAAA-CCCAGGGCATACCATGTGCTTACA i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 234293 21 - 397369 -----------------------------------------GAGAGCCCTGTCAGC-------------CATGTG------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56854489 258 + 57149010 I e aotNan1.NW_018500483v1 2670783 51 + 11732439 I a score=45363.000000 s hg38.chr20_KI270870v1_alt 99895 4 + 183433 GCCA s panTro5.chr20 66426419 4 + 66533130 GCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101564 4 + 62195757 GCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490908 4 - 578057 GCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015087 4 - 110113093 GCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740637 4 - 92844088 GCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408684 4 + 96509753 GCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879660 4 - 16982598 GCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681242 4 - 3785965 GCCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65835 4 - 179258 GCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551369 4 - 5823884 GCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34278 4 + 372756 GCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271743 4 + 16356641 GCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140770 4 + 1231380 GTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670834 4 + 11732439 GCCA i aotNan1.NW_018500483v1 I 51 C 0 s otoGar3.GL873542 22835903 4 + 22939663 ACCT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47596007 4 + 47698779 GCCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234314 1 - 397369 ---A i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782646 175 + 182113224 I e micMur3.chr18 56854489 258 + 57149010 I a score=1151930.000000 s hg38.chr20_KI270870v1_alt 99899 158 + 183433 ---CTGTTCTCCACCACCAACCCTCTA------ATTCTAGAACTTCCCACCAATACTCTCTGGATGAGGCCAGGTCCCCAGGGTCAGGTGACCCTCACAGCTGGAAGTAGAGGCTGACAATAGGCTTAGGCTGAAGCCCTTCCCAGAGATCCGAT----TCT-GACCTCTCT- s panTro5.chr20 66426423 158 + 66533130 ---CTGTTCTGCACCACCAACCCTCTA------ATTCTAGAACTTCTCACCAATACTCTCTGGATGAGGCCAGGTCCCCAGGGACAGGTGACCCTCACAGCTGGAAGTAGAGGCTGACAACAGGCTTAGGCTGAAGCCCTTCCCAGAGATCCGAT----TCT-GACCTCTCT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101568 158 + 62195757 ---CTGTTCTGCACCACCAACCCTCTA------ATTCTAGAACTTCTCACCAATACTCTCTGGATGAGGCCAGGTCCCCAGGGTCAGGTGACCCTCACAGCTGGAAGTAGAGGCTGACAACAGGCTTAGGCTGAAGCCCTTCCCAGAGATCCGAT----TCT-GACCTGTCT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 490912 155 - 578057 ---CTGTTCTCCACCACCAACCCTCTA------ATTCTAGAACTTCCCACCAATACTCTCTGGATGAGGCCAGGTCCCCAGGGTCAGGTGACCCTCACAGCTGG-AGTAGAGGCTGACAACAGGCTTAGGCTGAAGCCCTTCCCAGAGATCC-AT----TCT-GACCTCTC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015091 157 - 110113093 ---CTGTTCTCCACCACCAACCCTCTA------ATTCTAGAACTTCCCACCAATACTCTCTGGATGAGGCCAGGTCCCCAGGGTCAGGTGACCCTCACAGCTGGAAGGAGAGGCTGACAACAGGCTTAGGTTGAAGCCCTTCCCAAAGATTGGAT----TCT-GACCTCTC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740641 155 - 92844088 ---CTGTTCTCCACCACCAACCCTCTA------ATTCTAGAACTTCGCACCAATACTCTCTGGGTGAAGCCAGGT-CCCAGGGTCAGGTGACCCTCACAGCTGGACGTGGAGGCTGACAACAGGCTTAGGGTGAAG-CCTTCCCGGATACCAGTT----TCT-GACCTCTC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408688 155 + 96509753 ---CTGTTCTCCACCACCAACCCTCTA------ATTCTAGAACTTCGCACCAATACTCTCTGGGTGAAGCCAGGT-CCCAGGGTCAGGTGACCCTCACAGCTGGACGTGGAGGCTGACAACAGGCTTAGGGTGAAG-CCTTCCCGGATACCAGTT----TCT-GACCTCTC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879664 155 - 16982598 ---CTGTTCTCCACCACCAACCCTCTA------ATTCTAGAACTTCGCACCAATACTCTCTCGGTGAAGCCAGGT-CCCAGGGTCAGGTGACCCTCACAGCTGGACGTGGAGGCTGACAACAGGCTTAGGGTGAAG-CCTTCCCAGATACCAGTT----TCT-GACCTCTC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681246 155 - 3785965 ---CTGTTCTCCACCACCAACCCTCTA------ATTCTAGAACTTCGCACCAATACTCTGTGGGTGAAGCCAGGT-CCCAGGGTCAGGTGACCCTCACAGCTGGAAGTAGAGGCTGACAACAGGCTTAGGGTGAAG-CCTTCCCAGATACCAGTT----TCT-GACCTCTC-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65839 155 - 179258 ---CTGTTCTCCACCACCAACCCTCTA------ATTCTAGAACTTCGCACCAATACTCTCTGGGTGAAGCCAGGT-CCCAGGGTCAGGTGACCCTCACAGCTGGAAGTAGAGGCTGACAACAGGCTTAGGGTGAAG-CCTTCCCGGATACCAGTT----TCT-GACCTCTC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551373 156 - 5823884 ---CTGTTCTCCACCACCAACCCTCTA------ATTCTAGAACTTCCCACCAATACTCTCTGGGTGAAGCCAGGTCCCCAGGGTCAGGTGACCCTCACAGCTGGAAGTAGAGGCTGACAACAGGCTTAGGGTGAAG-CCTTCCCAGATACCAGTT----TCT-GACGTCCC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34282 141 + 372756 ---CTGTTCT---CCACCAACACTCTG------ATTCTAGAACTTCCCGCCAATACTCTCTGG-TGAGGCCAGGT---------------CCACTCAGAGCTGGACGTAGAGGCCGACAAT-GGCTTAGGGTGCAGCCCTTTCCAGGCATCAGATTCTGTCT-GCCCTCTT-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271747 137 + 16356641 ---CTGTTCT---TCACCAACCCTCTG------GTTCTAGAACTTCCCACCAATACTCTCTGG-TGAGGCCAGGT---------------CCACTCAGAGCTGGAAGTAGAGGCTCTCAGT-GGCTTAGGGTGCAGCCCTTCCCAGACATCAGAT----TCT-GCCCTCTT-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140774 137 + 1231380 ---CTGTTCT---CCATCAACCCTCTG------GTTCTAGAACTTCCCACCAATACTCTCTGG-TGAGGCCAGGT---------------CCACTCATAGCTGGAAGtagaggccgacagt-ggcttagggtgcagccctttccagacatcagat----tCT-GCCCTCTT-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670838 123 + 11732439 ---CTGTTCT---CCACCAACCTTCTG------ATTCTAGAACTTCCCAGCAATACTCTCTGG-TGAGGCCAGGG---------------TCACGCAGAGCTGGAAGTGGAGGCCGACAGT-GGCTTAGGGTACAACCCTTCCCAG-------------------CCTCTT-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22835907 134 + 22939663 ---CTACTACCCACC--TATTCCTCTACCACCCACCCTGGAAC-TCCCTCCAACAAGCT-------GGGCCAGGT----------------TCCTCAGGAGTAGAAGTGGAGGCTGACAACAGGCTTGGGG-GCATCCTTTCTCAGATA--GGGC----TCT-GACCCTCA-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181782821 151 + 182113224 ---CTGGTTTTGGTCACTAACCCTCTA------ATTCTACAACTTCCTACTGACTTACTCTGTCTGAGACCCACT-CTCCAGAGCAGATGACA-TCAGAGCCGGGAGTCAAAATAGA-AAGAAGCATGGGGCAT---CATACTTGGAGGCCAGAT----GCC-AACCTCTT-- i mm10.chr2 I 175 I 232 s canFam3.chr24 47596011 136 + 47698779 ----------------------CACCA------ACTCTAGAACTTTCCA-TGatgcactctgggtgaagccggcttcccagggtctgatgaccctcagcgatggaagtggaag-ggacaacaggcctgtgg-gcattccttcccagacctcaggc----tccAGGTCTCTC-- i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 234315 120 - 397369 TTCTTGTTCT---CTAGCCACACCCTC------GTTCTAGAGCCTCCCGCTGACCCACTCAGG-TGAAGCCAGGCCCTTGGGGTCTGGCAACTCTTGGAGATGGAAATGGAGGTGGA-------------------------------------T----TCT-GACCTGCC-A i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56854489 258 + 57149010 I a score=50623.000000 s hg38.chr20_KI270870v1_alt 100057 14 + 183433 TTTTTCTTTTTTGC s panTro5.chr20 66426581 14 + 66533130 TTTTTCTTTTTTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101726 14 + 62195757 TTTTTCTTTTTTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491067 14 - 578057 TTTTTCTTTTTTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015248 12 - 110113093 --TCTTTTTTTTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740796 10 - 92844088 ----TTTTTTTCGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408843 10 + 96509753 ----TTTTTTTCGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879819 10 - 16982598 ----TTTTTTTCGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681401 10 - 3785965 ----TTTTTTTCGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 65994 10 - 179258 ----TTTTTTTCGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551529 10 - 5823884 ----TTTTTTTTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34423 10 + 372756 ----GTTTTCTTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271884 10 + 16356641 ----GTTTCCTTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140911 10 + 1231380 ----GTTTTCTTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670961 1 + 11732439 ----G--------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22836041 10 + 22939663 ----TCTTCTTGGC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47596148 10 + 47698779 ----GTTTCTTCAC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 234435 10 - 397369 ----CCTCCATGAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181782972 232 + 182113224 I e micMur3.chr18 56854489 258 + 57149010 I a score=103167.000000 s hg38.chr20_KI270870v1_alt 100071 10 + 183433 ATGTAGATGC s panTro5.chr20 66426595 10 + 66533130 ATGTAGATGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101740 10 + 62195757 ATGTAGATGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491081 10 - 578057 ATGTAGATGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015260 10 - 110113093 ATGTAGATGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740806 10 - 92844088 ATGTAGATGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408853 10 + 96509753 ATGTAGATGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879829 10 - 16982598 ATGTAGATGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681411 10 - 3785965 ATGTAGATGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 66004 10 - 179258 ATGTAGATGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551539 10 - 5823884 ATGTAGATGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34433 10 + 372756 ATGTGGGTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271894 10 + 16356641 ATGTGGATGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140921 10 + 1231380 ATGTGGATGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670962 10 + 11732439 ATATGGACGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22836051 10 + 22939663 ATAAAAGTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181783204 10 + 182113224 ATGCTGAAGC i mm10.chr2 I 232 C 0 s canFam3.chr24 47596158 10 + 47698779 AGGGTGATGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234445 10 - 397369 ATGTAGAAAC i dasNov3.JH569290 C 0 I 2 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56854489 258 + 57149010 I a score=375053.000000 s hg38.chr20_KI270870v1_alt 100081 37 + 183433 TCTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CATGGC s panTro5.chr20 66426605 37 + 66533130 TCTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CATGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101750 37 + 62195757 TCTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CATGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491091 37 - 578057 TCTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CATGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015270 37 - 110113093 TCTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CATGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740816 37 - 92844088 TTTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CACAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408863 37 + 96509753 TTTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CACAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879839 37 - 16982598 TTTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CACAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681421 37 - 3785965 TTTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CACGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 66014 37 - 179258 TTTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CACGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551549 37 - 5823884 TTTCCAGCAAGGATC-C-AGCTGTGACTCAGGG---CGTGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34443 40 + 372756 TCTCCAGCAAGGACC-C-AACTGTGATGCAGGGACTCAGGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271904 40 + 16356641 TCTCCAGCAAGGACC-C-AGCTGTGACACAGGGACTCAGGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140931 40 + 1231380 TCTCCAGCAAGGACC-C-AGCTGTGATGCAGGGACTCAGGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2670972 40 + 11732439 TCTCCAGCAAGGACC-C-AGCTGTGATGCAGGGACGCAGGGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56854747 36 + 57149010 TCTCCAGCAAGGATC-C-AACTG-TGACCAGGG---CATGGC i micMur3.chr18 I 258 I 58 s otoGar3.GL873542 22836061 37 + 22939663 TTTCCAGCAAGGATC-C-AGCTGATACCCAGGT---CATGGC i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181783214 37 + 182113224 TTTGCATTGAGTGTCTC-AGTCAACACCTAGG----CATTGC i mm10.chr2 C 0 I 1 s canFam3.chr24 47596168 38 + 47698779 TCTCCATCAAGGATC-CAAGCCATGATGCACGG---CATGGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234457 12 - 397369 TCTCCATCAAGG------------------------------ i dasNov3.JH569290 I 2 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=637054.000000 s hg38.chr20_KI270870v1_alt 100118 72 + 183433 TCAAGGAC-AGTGATGGCGTAGGGTGTAG-GCAAGGAGGGCTAT-GCAGTTGTA-GTGGGAACTTCATTTGGGGGT s panTro5.chr20 66426642 72 + 66533130 TCAAGGAC-AGTGATGGCGCAGGGTGTAG-GCAAGGAGGGCTAT-GCAGTTGTA-GTGGGAACTTCATTTGGGGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101787 72 + 62195757 TCAAGGAC-AGTGATGGCGTAGGGTGTAG-GCAAGGAGGGCTAT-GCAGTTGTA-GTGGGAACTTCATTTGGGGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491128 72 - 578057 TCAAGGAC-AGTGATGGCGTAGGGTGTAG-GCAAGGAGGGCTAT-GCAGTTGTA-GTGGGAACTTCATTTGGGGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015307 72 - 110113093 TCAAGGAC-AGTGATGGCGTAGAGTGTAG-GCAAGGAGGGCTAT-GCAGTTGCA-GTGGGAACTTCATTTGGGGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740853 72 - 92844088 TCAAGGAC-GGTGATGGCGCAGGGTGTAG-GCAAGGAGGGCTAT-GCAGTTGCG-GTGGGAACTTCATTTGGGGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408900 72 + 96509753 TCAAGGAC-GGTGATGGCGCAGGGTGTAG-GCAAGGAGGGCTAT-GCAGTTGCG-GTGGGAACTTCATTTGGGGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879876 71 - 16982598 TCAA-GAC-GGTGATGGCGCAGGGTGTAG-GCAAGGAGGGCTAT-GCAGTTGCG-GTGGGAACTTCATTTGGGGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681458 72 - 3785965 TCAAGGAC-GGTGATGGCGCAGGGTGTAG-GCAAGGAGGGCTAT-GCAGTTGCG-GTGGGAACTTCATTTGGGAGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 66051 72 - 179258 TCAAGGAC-GGTGATGGCGCAGGGTGTAG-GCAAGGAGGGCTAT-GCAGTTGCG-GTGGGAACTTCATTTGGGAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551586 72 - 5823884 TCAAGGAC-GGTGACGGCGTAGGGTGTAG-GCAAGGAGGGCCAT-GCAGTTGCA-GTGGGAACTTCATTTGGGGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34483 72 + 372756 TCAGGGAC-AGTGATGGCCTAGGGTGTAG-GCAGGGAGGGCTGT-GCAGTTACA-GTGGGACCTTCATTTGAGGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16271944 72 + 16356641 TCAGGGAC-AGTGAGGACCGAGGGTGCAG-GCAGGGAGGGCTGT-GCAGTTACA-GTGGGACCTTCATTTGAGGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1140971 72 + 1231380 TCAGGGAC-AATGATGGCCTAGGGTGTAG-GCAGGGAGGGCTGT-GCAGTTACA-GTGGGACCTTCATTTGAGGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2671012 72 + 11732439 TCAGGGAC-AGTGACGGCCTAGGGTGTGG-GCAGGGAGGGCTGT-GCAGTTTCA-GTGGGACCTTCATTGGAGGGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22836099 57 + 22939663 ACCAAGAC-AGTCGTGGCCCAGGGTGGAATGCA---AGTTCTCTCCCAGTTGAG-GAGAGAA-------------- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181783252 71 + 182113224 TCCAGGATAAGGGACAGCCTA-AATATAG-ATAGAAAAGACCAT-G-AGTTTAA-GGCAGAATGACATCTCAGGGT i mm10.chr2 I 1 C 0 s canFam3.chr24 47596206 56 + 47698779 ------------------CCAGGGTGCAG-ACGGGAAGGGCTAG-AAAATTTTAGGCAACAAGTTCACTTCATGGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234469 62 - 397369 ----------GTGGTG--CCAGGGTGCAG-ATGGGGAAGTCCGCCTTCTTTGGG-GTGGGAACCTCGCTGGAGGGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56854783 58 + 57149010 I a score=823130.000000 s hg38.chr20_KI270870v1_alt 100190 61 + 183433 GCTTGTGTTTTACTCTCAAAACCCAACCTTTTTCTTTTGAATCTGGTGGCGAGAATGTACA s panTro5.chr20 66426714 61 + 66533130 GCTTGTGTTTTACTCTCAAAACCCAACCTTTTTCTTTTGAATCTGGTGGCGAGAATGTACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101859 61 + 62195757 GCTTGTGTTTTACTCTCAAAACCCAACCTTTTTCTTTTGAATCTGGTGGCGAGAATGTACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491200 61 - 578057 GCTTGTGTTTTACTCTCAAAACCCAACCTTTTTCTTTTGAATCTGGTGGCGAGAATGTACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015379 61 - 110113093 GCTCTTATTTTACTCTCAAAACCCAACCTTTGTCTTTTGAATCTGGTGGTGAGAATGTACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740925 61 - 92844088 GCTTGTATTTTACTCTCAAAGCCCAACCTTTTTCTTTTGAATCTGGTGACGAGAATGTACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96408972 61 + 96509753 GCTTGTATTTTACTCTCAAAGCCCAACCTTTTTCTTTTGAATCTGGTGACGAGAATGTACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16879947 61 - 16982598 GCTTGTATTTTACTCTCAAAGCCCAACCTTTTTCTTTTGAATCTGGTGACGAGAATGTACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681530 61 - 3785965 GCTTGTATTTTACTTTCAAAGCCCAACCTTTTTCTTTTGAATCTGATGACGAGAATGTACA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 66123 61 - 179258 GCTTGTATTTTACTTTCAAAGCCCAACCTTTTTCTTTTGAATCTGGTGACGAGAATGTACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551658 61 - 5823884 GCTTGTGTTTTACTCTCAAAGCCCAACCTTTGTGTTTTGAATCTGGTGATGAGAATGTACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34555 61 + 372756 GCTTGTAATTTACTCTCAAGACCCAACCTTTTTATTTTGAATCTGGTGGTGAAAATGTACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16272016 61 + 16356641 GCTTGTATTTTACTCTCAAGACCCAACCTTTTTATTTTGAATCTGGTGACGAGAATGTACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1141043 61 + 1231380 GCTTGTATTTTACTCTCAAGACCCAACCTTTTTATTTTGAATCTGGTGACGAGAATGTACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2671084 61 + 11732439 GCTTGTATTTTACTCTCAAGACCCAACCTTTCTATTTTGAATCTGGTGACGACAATGTACA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56854841 61 + 57149010 GCTTGTATTTTACTCTCAAAACCTAACATTTTTCTTTTGAATCTGGCGTGGAGAATGTACA i micMur3.chr18 I 58 I 493 s otoGar3.GL873542 22836156 58 + 22939663 -CTTGCATTTTACTTCCCAAACCTAACATTTTTCTTTTGAATCAGGAGTTAAAAATATA-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181783323 61 + 182113224 ACTTGCATTTTACTATTAGAATATACTATTTCTCCTTCATGTCTGGTGATAGAAATGTATA i mm10.chr2 C 0 C 0 s canFam3.chr24 47596262 61 + 47698779 ACTTGTACTTTACTCTCAAAACCTAACATCTTTCCTTTGAACCTGGTGACTAGAATATAGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234531 61 - 397369 GCTTATATTTTATTCTCAAAGCTCAACATTTTTCTTTTGAATCTTGTGACTGGAATGTGCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=733663.000000 s hg38.chr20_KI270870v1_alt 100251 78 + 183433 TTTTAATGGGTCTGTTATAGACAACTTGCTGAGCACCTCCGCTCATATTTTGGCTCCCGcaggattatcagtgctctg s panTro5.chr20 66426775 78 + 66533130 TTTTAATGGGTCTGTTATAGACAACTTGCTAAGCACCTCCCCTCATATTTTGGCTCCCGcaggattatcagtgctctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101920 78 + 62195757 TTTTAATGGGTCTGTTATAGACAACTTGCTAAGCACCTCCGCTCATATTTTGGCTCCCGcaggattatcagtgctctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491261 78 - 578057 TTTTAATGGGTCTGTTATAGACAACTTGCTGAGCACCTCCGCTCATATTTTGGCTCCTGCAGGGTtatcagtgctctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015440 78 - 110113093 TTTTAATGGGTCTGTTATAGATACCTTGTTAAGCACCTCTGCTCATATTTTGGCTCCCacaggattctcagtgctctg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92740986 77 - 92844088 TTTTAATGGGTCTGTTATAGATGCCTCGTTAAGCGCCTCTGCT-GTGTTTTGGCTCCCacaggattatcagtgctctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96409033 77 + 96509753 TTTTAATGGGTCTGTTATAGATGCCTCGTTAAGCGCCTCTGCT-GTGTTTTGGCTCCCacaggattatcagtgctctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880008 77 - 16982598 TTTTAATGGGTCTGTTATAGATGCCTCGTTAAGCGCCTCTGCT-GTGTTTTGGCTCCCacaggattatcagtgctctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681591 78 - 3785965 TTTTAATGGGTCTGTTATAGATGCCTCGTTAAGCGCCTCTGCTCGTATTTTGGCTCCCacaggattatcagtgctctg i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 66184 78 - 179258 TTTTAATGGGTCTGTTATAGATGCCTCGTTAAGCGCCTCTGCTCGTATTTTGGCTCCCacaggattatcagtgctctg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551719 78 - 5823884 TTTTAATGGGTCTGTTATAGATGCCTCGTGAAATGCCTCTGCCCGTGTTTTGGCTCCCacaggattatgagtgctctg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34616 78 + 372756 TTTTAATGGGTCTGTTATAGATACCTTGTTCAGCCTCTCCGCTCATATTTTGGCTCCCataggattatccatgctcta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16272077 78 + 16356641 TTTTAATGGGTCTGTTATAGATACCTTGTTCAGCATCTCCGCTCATATTTTGGCTCCCataggattatccatgctctg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1141104 77 + 1231380 TTTTAATGGGTCTGTTATAGATACCTTGTTCAGCATCTCTGGTCATATTTTGGCT-CCataggattatccatgctctg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2671145 78 + 11732439 TTTTAATGGGTCTGTTATAGATACCTTGTTCAGGATCTCTGCTTGTGTTTTGGCTCCCataggattatccgtgctctg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22836214 42 + 22939663 ----------TGTGTGGTGG--------------------------TTTTTGGCTCATGAAGGGTCATcagagctctg i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181783384 68 + 182113224 -ATTAACAGGTCTATTATGATCACTTTGCTAAGTACTCAGACTC--ATTTTGATTCT-------TTATCAGTGTGCTG i mm10.chr2 C 0 I 26 s canFam3.chr24 47596323 75 + 47698779 CTTTAATGGGTCTCTTA---GCATCCTGTTAAGCACCTCCACTCCCACTTAGATTCCTGTAGGCTTGTCGgtgctctg i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234592 68 - 397369 -CTTATATGGTCTGT---------CTTGCTAAGCCCCTCCACTCATATTTTTATTCCAGTAAGATtatcagtaccctg i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56854902 493 + 57149010 I a score=1247862.000000 s hg38.chr20_KI270870v1_alt 100329 126 + 183433 ctgatccatgttggagcctg---gggcacaaggaagagtcagtaatatggatcctg-----------tc-tttatttaagg----ttttggt-----------------atcttgtttattagggg-tttttt-gcatca-tgttgatgtttc-taaatattgaat s panTro5.chr20 66426853 126 + 66533130 ctgatccatgttggagcctg---gggcacaaggaagagtcagtaatatggatcctg-----------tc-tttatttaagg----ttttggt-----------------atcttgtttattagggg-tttttt-gcatca-tgttgatgtttc-taaatattgaat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62101998 127 + 62195757 ctgatccatgttggagcctg---gggcacaaggaagagtcagtaatatggatcctg-----------tc-tttatttaagg----ttttggt-----------------atcttgtttattaggggttttttt-gcatca-tgttgatgtttc-taaatattgaat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491339 125 - 578057 ctgatccatgttggagcctg---gggcacaaggaggagtcggtaatatggatcctg-----------tc-tttatttaagg----ttttggt-----------------atc-tgtttattagggg-tttttt-gcatca-tgttgatgtttc-taaatattgaat i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015518 126 - 110113093 ctgatccatattggagcctg---aggcacaaggaagagttggtaatattgatcctg-----------tc-tttatttaaag----ttttggt-----------------atcttgtttattagggg-tttttt-gcatca-tgttgatgtttc-aaaatattgaat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92741063 125 - 92844088 ctgatccacactggagcctg---aggcacaaggaggagtcagtaatattgatcctg-----------tc-ttgatttaaag----ttttgat-----------------atcttgtttatcatgg--tttttt-gcatca-tgttgatgtttc-taaatattgaat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96409110 125 + 96509753 ctgatccacactggagcctg---aggcacaaggaggagtcagtaatattgatcctg-----------tc-ttgatttaaag----ttttgat-----------------atcttgtttatcatgg--tttttt-gcatca-tgttgatgtttc-taaatattgaat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880085 125 - 16982598 ctgatccacactggagcctg---aggcacaaggaggagtcagtaatattgatcctg-----------tc-ttgatttaaag----ttttgat-----------------atcttgtttatcatgg--tttttt-gcatca-tgttgatgtttc-taaatattgaat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681669 125 - 3785965 ctgatccacactggagcctg---aggcacaaggaggagtcagtaatattgatcctg-----------tc-ttgatttaaag----ttttggt-----------------atcttgtttatcatgg--tttttt-acatca-tgttgatgtttc-taaatattgaat i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 66262 125 - 179258 ctgatccacactggagcctg---aggcacaaggaggagtcagtaatattgatcctg-----------tc-ttgatttaaag----ttttggt-----------------atcttgtttatcatgg--tttttt-acatca-tgttgatgtttc-taaatattgaat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551797 124 - 5823884 ctgatccacactggagcctg---aggcacgaggaggagtcagtaata-tgatcctg-----------tc-ttgatttaaag----ttttggt-----------------atcttgtttatcatgg--tttttt-gcatca-tgttgatgtttc-taaatattgaat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34694 126 + 372756 ctgattcaccttggagcctg---aggcacaaggaagtgtcagtcatattggtcctg-----------tc-tttatttaaag----ttttggt-----------------attttgtttatcatggt-tttttt-gtatca-tgttgatgtttc-taaatattgaat i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16272155 125 + 16356641 ctgatccacattggagcctg---aggcacaaggaagtgtcagtcatattgatcctg-----------tc-tttatttaaag----ttttgac-----------------attttgtttatcat-tt-tttttt-gcatca-tgttgatgtttc-taaatattgaat i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1141181 127 + 1231380 ctgatccacagtggagcctg---aggcacaaggaagtgtctgtcatattgatcctg-----------tc-tttatttaaag----ttttggt-----------------attttgtttatcatgtt-ttttttggcttca-tgttgatgtttc-taaatattgaat i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2671223 126 + 11732439 ctgatccacattggagcctg---aggcacgaggaagtgtcagtcatattgatcctc-----------tc-tttatttaaag----ttttggt-----------------attttgtttatcatggt-tttttt-gcatca-tgttgatgtttc-taaatattgaat i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22836256 130 + 22939663 ctgaaccgaggtggagcctgagaaggcccaaggaa-agccagtaatactgacgctg-----------tc-tttacttaaag----ttttggt-----------------attttgtttatcctgga-cttttt-gcattagtcttgatattttaaaaatactgaat i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47596398 153 + 47698779 -----tcatgttggagctgg---aggca-aagggaaagtcagtagtaccgatcctgtattatttattta-tttatttaaaaatttttttgatcctatatttaaatttacattttattcatcaagga-ttcttg-acattaatttcgatgtttt-aaaatgttgcat i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234660 125 - 397369 ctgagccatattggagcctg---ggacaaaaaagaaaatcagcaatactggtcctg-----------tcttttattgaaaa----ctttgat-----------------at-tggttaattgtgga-tttctt-gcattacttttga--ttta-aaaatattgcat i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181783452 26 + 182113224 I e micMur3.chr18 56854902 493 + 57149010 I a score=3351644.000000 s hg38.chr20_KI270870v1_alt 100455 375 + 183433 taaaatattatttatcttgatcattgagtttttG------------------------------GCCTCATTCCCCTCACCCTAC------------------CCCAGATCCTGAGGATTCACATAGCGCTGTACTGGCATGAGATCATGTGAGCATGAACGTTACTTGACTTGAGGCCAGGGGCTCTG--CATGCAGCGTTATCTACAAATGTCTGGTGCCATGTCAGGGGTGGGTC---------GGAAGACTTTTGTCTC-CCCCTGG-CCCAGACATGACAAACTCAGAGAGTTTGGGACCTACCAT-GACAACCCATGGCTGTTCAAAGTGCTGCTT---CTGTGAACAAAGCCAGG-GACCCGTGCCCAGGTTCTCGTGGCATCACCAGCTCTTTCATCACTGCTCTGTTTGAGGGTC--------ATTTCCCTTCTTTTCTT s panTro5.chr20 66426979 375 + 66533130 taaaatattatttatcttgatcattgagtttttG------------------------------GCCTCATTCCCCTCACCCTAC------------------CCCAGATCCTGAGGATTCACATAGCGCTGTACTGGCATGAGATCATGTGAGCATGAACGTTACTTGACTTGAGGCCAGGGGCTCTG--CATGCAGCGTTATCTACAAATGTCTGGTGCCATGTCAGGGGTGGGTC---------GGAAGACTTTTGTCTC-CCCCTGG-CCCAGGCATGACAAACTCAGAGAGTTTGGGACCTACCAT-GACAACCCATGGCTGTTCAAAGTGCTGCTT---CTGTGAACAAAGCCAGG-GACCCGTGCCCAGGTTCTCGTGGCATCACCAGCTCTTTCATCACTGCTCTGTTTGAGGGTC--------ATTTCCCTTCATTTCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62102125 375 + 62195757 taaaatattatttatcttgatcattgagtttttG------------------------------GCCTCATTCCCCTCACCCTAC------------------CCCAGATCCTGAGGATTCACATAGCGCTGTACTGGCATGAGATCATGTGAGCATGAACGTTACTTGACTTGAGGCCAGGGGCTCTG--CATGCAGCGTTATCTACAAATGTCTGGTGCCATGTCAGGGGTGGGTC---------GGAAGACTTTTGTCTC-CCCCTGG-CCCAGGCATGACAAACTCAGAGAGTTTGGGACCTACCAT-GACAACCCATGGCTGTTCAAAGTGCTGCTT---CTGTGAACAAAGCCAGG-GACCCGTGCCCAGGTTCTCGTGGCATCACCAGCTCTTTCATCACTGCTCTGTTTGAGGGTC--------ATTTCCCTTCATTTCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491464 369 - 578057 taaaatattatttatcttgatcattgagtttttG------------------------------GCCTCATTCCCCTCA------------------------CCCAGATCCTGAGGATTCACATAGCGCTGTACTGGCATGAGATCATGTGAGCACGAAAGTTACTTGACTTGAGGCCAGGGGCTCTG--CATGCAGCGTTATCTACAAATGTCTGGTGCCATGTCAGGGGTGGGTC---------GGAAGACTTTTGTCTC-CCCCTGG-CCCAGGCATGACAAACTCAGAGAGTTTGGGACCTACCAT-GACACCCCATGGCTGTTCAAAGTGCTGCTT---CTGTGAACAAAGCCAGG-GGCCCGTGCCCAGGTTCTCGTGGCATCACCAGCTCTTCCATCACTGCTCTGTTTGAGGGTC--------ATTTCCCTTCATTTCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110015644 362 - 110113093 taaaatattatttatcttgatcattgagtttttG------------------------------GCCTCATTCCCCTCACCCTAC------------------CCCAAATCCTGAGGATTCACATAGCGCTGTACTGGCATGAGATCATGTGAGCATGAAAGTTACTTGATTTGAGGCCAGGGGCTCTG--CATGCAGTGTTATCTACAAATGTCTAGTGCCATGTCAGGGGTGAGTA---------GGAAGATTTTTGTCTC-CCCCTGG-CCCAGGCATGACAAACTC--AGAGTTTGGGACCTACCATGGACAACCCATGGCTGTTCAAAGTGCTGCTC---CTGTGAACAAAGCCAGG-GTCCCATGCCCAGGTCCTCGTGGCATCACCGGCTCTTTCATCACTGC------------TT--------ACTTCCCTTCATTTCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92741188 380 - 92844088 taaaatattatttatcttggtcattcagtttttG------------------------------GCCTCATTCCCCTTGCCCCAC------------------CCCAAACCCTGAGGATTCACATAGAGCTGTACTGGCCTGAGATCATGTGAGCATGAGAGTTACTTGATTTGAGGCCAGGGGCTCTG--CATGCAGTGTTATCTGCAAATGTCTGGTGCCATGCCAGGGGTGGGTA---------AGAAGATTTTTGTCTC-CCCCTGG-CCCAGGCATGACAAACTCAGAGAGTTTGGCACCTACATG-GACAACCCATGGCTGTTCAAAGTGCTGCTT---CTGTGAACAAAGCCAGG-GGCCCGTGCCCAGATTCTTGTGGCATCACCAGCTCTTTCATCT---CTCTGTCTGAGGGTCATTTCCTTATTTCCCTTCATTTCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96409235 380 + 96509753 taaaatattatttatcttggtcattcagtttttG------------------------------GCCTCATTCCCCTTGCCCCAC------------------CCCAAACCCTGAGGATTCACATAGAGCTGTACTGGCCTGAGATCATGTGAGCATGAGAGTTACTTGATTTGAGGCCAGGGGCTCTG--CATGCAGTGTTATCTGCAAATGTCTGGTGCCATGCCAGGGGTGGGTA---------AGAAGATTTTTGTCTC-CCCCTGG-CCCAGGCATGACAAACTCAGAGAGTTTGGCACCTACATG-GACAACCCACGGCTGTTCAAAGTGCTGCTT---CTGTGAACAAAGCCAGG-GGCCCGTGCCCAGATTCTTGTGGCATCACCAGCTCTTTCATCT---CTCTGTCTGAGGGTCATTTCCTTATTTCCCTTCATTTCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880210 380 - 16982598 taaaatattatttatcttggtcattcagtttttG------------------------------GCCTCATTCCCCTTGCCCCAC------------------CCCAAACCCTGAGGATTCACATAGAGCTGTACTGGCCTGAGATCATGTGAGCATGAGAGTTACTTGATTTGAGGCCAGGGGCTCTG--CATGCAGTGTTATCTGCAAATGTCTGGTGCCATGCCAGGGGTGAGTA---------AGAAGATTTTTGTCTC-CCCCTGG-CCCAGGCATGACAAACTCAGAGAGTTTGGCACCTACATG-GACAACCCACGGCTGTTCAAAGTGCTGCTT---CTGTGAACAAAGCCAGG-GGCCCGTGCCCAGATTCTTGTGGCATCACCAGCTCTTTCATCT---CTCTGTCTGAGGGTCATTTCCTTATTTCCCTTCATTTCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3681794 380 - 3785965 taaaatattatttatcttggtcattcagtttttG------------------------------GCCTCATTCCCCTTGCCCCAC------------------CCCAAACCCTGAGGATTCACATAGAGCTGTACTGGCCTGAGATCATGTGAGCATGAGAGTTACTTGATTTGAGGCCAGGGGCTCTA--CATGCAGTGTTATCTGCAAATGTCTGGTGCCATGCCAGGGGTGGGTA---------AGAAGATTTTTGTCTC-CCCCTGG-CCCAGGCATGACAAACTCAGAGAGTTTGGCACCTACATG-GACAACCCACGGCTGTTCAAAGTGCTGCTT---CTGTGAACAAAGCCAGG-GGCCTGTGCCCAGATTCTTGTGGCGTCACCAGCTCTTTCATCT---CTCTGTTTGAGGGTCATTTCCTTATTTCCCTTCATTTCTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 66387 380 - 179258 taaaatattatttatcttggtcattcagtttttG------------------------------GCCTCATTCCCCTTGCCCCAC------------------CCCAAACCCTGAGGATTCACATAGAGCTGTACTGGCCTGAGATCATGTGAGCATGAGAGTTACTTGATTTGAGGCCAGGGGCTCTA--CATGCAGTGTTATCTGCAAATGTCTGGTGCCATGCCAGCGGTGGGTA---------AGAAGATTTTTGTCTC-CTCCTGG-CCCAGGCATGACAAACTCAGAGAGTTTGGCACCTACATG-GACAACCCACGGCTGTTCAAAGTGCTGCTT---CTGTGAACAAAGCCAGG-GGCCTGTGCCCAGATTCTTGTGGCGTCACCAGCTCTTTCATCT---CTCTGTTTGAGGGTCATTTCCTTATTTCCCTTCATTTCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5551921 383 - 5823884 taaaatattatttatcttggtcattcagtttttG------------------------------GCCTCATTCCCCTTGCCCCAC------------------CCCAAACCCTGAGGATTCACATAGAGCTGTACTGGCCTGAGATCATGTGAGCATGAGAGTTACTTGATTTGAGGCCAGGGGCTCTG--CATGCAGTGTTATCTGCCGATGTCTGGTGCCATGCCAGGGGCGGGTA---------AGAAGATTTTTGTCTC-CCCCTGG-CCCAGGCATGACAAACTCAGAGAGTTTGGCACCTACATG-GACAACCCACGGCTGTTCAAAGCGCTGCTT---CTGTGAACAAAGCCAGG-GGCCCATGCCCAGATTATTGTGGCATCACCAGCTCTTTCATCTCTGCTCTGTTTGAGGGTCATTTCCTTATTTCCCTTCATTTCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 34820 366 + 372756 taaaatattatttatcttgatcgctgagtttttG------------------------------GCCTCATTCCCCTCACACTAC------------------CACAAGCCCTGAAGATTCACATAGAGCTGTCCTGGCATGAGGTCATGTGAG-----AAGTTACTTGATTTGAGGACAGGGCCTCTG--CATGAAGTGTTATCTACAAATGTCTGATGCCACGTCAGGGGTGGGTA---------GGAAGATTTTTGTCTA-CCCCTGGCCCCAAATATGACGCACTTATAGAGTTTGGGACCTGCCATGGATGACCCATGGCTGTTCAAAGTGCAAATT---CTGTGAACAAAGCCAGG-GGCCCATGCCCAGGTTCTCGCGGCATCACCAGCTCTTTCATCACTGCTCTGTTTGAGAGTC--------ATTTTCCTTTG------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16272280 370 + 16356641 taaaattttatttatcttgatcattgagtttttG------------------------------GCCTCATTCCCCTCACAGCAC------------------CACAGGCCCTGAGGATTCACAGAGAGCTGTCCTGACATGAGGTCATGTGAG-----AAGTAACTTGATTTGAGGACAGGGACTTTG--CATAAAGTGTTATCTACAAACGTCTGACGCCATGTCAGGGGTGGGTA---------GGAAGATTTTTGTCTA-CCCCCGGCCCCAAGTATGACAAACTCACAGAGTTTGGGACCTGCCATGGATGACCCATGGCTTTTCAAAGTGCAGCTT---CTGTGAACAAAGCCAGG-GGCCCATGCCCACATTCTTGCGGCATGACCAGCTCTTTCATCACTGCTCTGTTT--GAGTC--------ATTTTCCTTTATTTTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1141308 373 + 1231380 taaaatattatttatcttgatcgtcgagtttttG------------------------------GCCTCATTCCCCTCACACTAC------------------CACAAGCCCTGAGGATTCACATAGAGCTGTCCTGGCATGAGGTCATGTGAC-----AAGCTACTTGATTTGAGGACAGGGGCTCTG--CATGAAGTGTTATCTACAAACATCTGACGCCACGTCAGGGGTGGGTA---------GGAAGATTTTTGTTTATCCCCCGGCCCCAAGTACGACAAACTCAGAGAGTTTGGGACCTGCCATGGATGACCCATGGCTGTTCAAAGTGCAGCTT---CTGTGAACAAAGCCATG-GGCCCATGCCCAGGTTCTCGCGGCATCACCAGCTCTTTCATCACTGCTCTGTTTGAGAATC--------ATTTTCCTTTATTTTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2671349 371 + 11732439 taaaatattatttatcttgaccgttgagtttttG------------------------------GCCTCATTCCCCTCACACTAC------------------CACAAGCCCTGAGGATTCACATAGAGCTGTCCTGGCATGAGGTCATGTGAG------AGTTACTTGATTTGAGGACAGGGGCCCTG--CATGAAGTGTTATCTACAAACGTCTGATGCCACGTCAGGGGTGGGTA---------GGAAGATTTTTGTCTA-CCCCTGGCCCCAAGTATGACAAACTCGGAGAGTGTGGGACCTGCCGCGGATGACCCACGGCTGTTCAAGGTGCAGCTT---CTGTGAACAAAGCCAGG-GGCCCACGCCCGGGTTCTCGCGGCATCACCAGCTCTTTCATCACTGCTCTGTTTGAGAGTC--------ATTTTCCTTTATTTTTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22836386 319 + 22939663 taaaatgtcatttatgttggtcattgggtttttg------------------------------gcctca---------ccctgt------------------ctcacg-cctgagAACTCATGCAGTACTGC-CTGGCATGAAACCACATGA------------------------CCAGGGGTTCTA--AGTGAAGTGGTGCCTGCCCTTATCCAGTGC----------------------------AAG---TCTGTCTC-CCCGTGG-TCAAGGTGTGACAAGCTCAGAGGGTTTAGAAGCTGCCATGGACAAGGTATGATTGTCCATAATGCACCACCGGCTATGAAT--AGCCTGT-GGTACCTGCTTGGGTTCTTCTGGCACCACCAGCT-GTTCATTGATGCTCTGTTTGAGAATC--------ATTTTCCTCTATTTTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181783478 351 + 182113224 TAAAATATTATTTATTTCTATTACTGAATTTTTG------------------------------ACCTCTCTCATTTCACTGTAC------------------C-CAAGCCCAGAGGATTCCCCAAGAGACATG--GGTGTTAGATCATATGACCATGAAAGT-------------------GGCTCTA--AGCCTAATAGTTTCTGTAGTTGCTTGGTACCCTGTCAAAGTGAAGTA---------GGAAGACTCTGGTTTC-TCCACAG-ACCAGGCACAACATGCTCAGAAGGTTTGAG-CTTGCCATGAGCTACATGTGACTGTTCAGAATGCAGGTG---CTGGTAAT-AAGCCTGT-GGCTGACACTTGGGCCCTATTAGCAGCACTAAGGCTTT-ATGACTGTGTCATCTGTAAGCC--------AATCTGTTTTACTTTGg i mm10.chr2 I 26 C 0 s canFam3.chr24 47596551 334 + 47698779 taaacta----ttatcttgatcactaagtttttg--------------------------------tttcctaccctaaatttgcacctgggcaaatgcctcactcatctcTTGATGCTCAGTGTTGAGC-ATTCAAGC---AGATTTTGTGACTGAAAGAGTTATTTGGTCTGAGGTCAGGGGCTCTGGACATGAATCGATAGCT------------------GTTGGAGGTGTGTAAGGACACACAGAAGGCCTCTGTCTC-CCTATGG-CTCGGGT-TGACAAGCTCAGAGGGTGCAAGAACCA--------------------------------------CTGTGAGC--AGCCTGGTGGCCTATGCTCAGGCTTTCTTGGCAACATTGGCTCTTTCACAACCGCTCCATT----AGTC----------TTTCCTCTAGTTTGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 234785 364 - 397369 taaaatagtatgcattttgatacctgagtttttggtcccctttcaactttgcactgaagaagatgcctcgttcacttcaccctaC------------------TTCA-GCGCTGAGGACTCAAGGAGAGCTCCTTTGACATGAGGCCATTTGGCCATCAAAGTCACCTGATTGAAGGCCATTGGCCCTG--GGTGAAGGGCTGT---------TCCAGT----TGTCTGGGATGGGTA---------GGAGCACTGGC-CCTC-CCTGTGG-CCCTGGAATGACGTGCTCTCGGGCTCCAGGACCTGCTGTGGACCACATGTGACTGTTCAAAAC-CCACCA---CTGTGAATAAGCTCAGA-GCCC---ACTCAGCCTCTC-TGGCAGCATCGACACTGTC--CCTTTCCTGGTTTCAAC---------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1847977 940 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56854902 493 + 57149010 I a score=135214.000000 s hg38.chr20_KI270870v1_alt 100830 12 + 183433 ----GCAGAT------------AGGGCC s panTro5.chr20 66427354 12 + 66533130 ----GCAGAT------------AGGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62102500 12 + 62195757 ----GCAGAT------------AGGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491833 12 - 578057 ----GCAGAT------------AGGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016006 12 - 110113093 ----GCAGAT------------AGGGCC i nomLeu3.chr13 C 0 I 1 s rheMac8.chr10 92741568 12 - 92844088 ----GCAGAT------------AGGGCC i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96409615 12 + 96509753 ----GCAGAT------------AGGGCC i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16880590 12 - 16982598 ----GCAGAT------------AGGGCC i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3682174 12 - 3785965 ----GCAGAT------------AGGGCA i cerAty1.NW_012001373v1 C 0 I 1 s manLeu1.NW_012101652v1 66767 12 - 179258 ----GCAGAT------------AGGGCC i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5552304 12 - 5823884 ----GCAGAT------------AGGGCC i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chrUn_GL286459 35186 10 + 372756 ------GGAT------------AGGGCC i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16272650 12 + 16356641 ----GCAGAT------------AGGGCC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1141681 12 + 1231380 ----GCAGAT------------AGGGCC i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2671720 12 + 11732439 ----GCAGAT------------AGGGCC i aotNan1.NW_018500483v1 C 0 I 1 s proCoq1.NW_012150197v1 1848917 12 - 2029793 ----GCAGGT------------AGGGCC i proCoq1.NW_012150197v1 I 940 I 1 s otoGar3.GL873542 22836705 12 + 22939663 ----GCACAG------------AGGGCT i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181783829 24 + 182113224 ----acgtatctctgtgagctcaaggcc i mm10.chr2 C 0 I 21 s canFam3.chr24 47596885 12 + 47698779 ----GCAAAT------------AGGGCC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 235149 12 - 397369 TTGAACAGAG------------AA---- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56854902 493 + 57149010 I a score=475722.000000 s hg38.chr20_KI270870v1_alt 100842 34 + 183433 GAGTG-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGAA s panTro5.chr20 66427366 34 + 66533130 GAGTG-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62102512 34 + 62195757 GAGTG-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491845 34 - 578057 GAATG-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016019 34 - 110113093 GAGTT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGAA i nomLeu3.chr13 I 1 C 0 s rheMac8.chr10 92741581 34 - 92844088 GAGTT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGTA i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96409628 34 + 96509753 GAGTT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGTA i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16880603 34 - 16982598 GAGTT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGTA i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3682187 34 - 3785965 GAGTT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGACGTA i cerAty1.NW_012001373v1 I 1 C 0 s manLeu1.NW_012101652v1 66780 34 - 179258 GAATT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGTA i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5552317 34 - 5823884 GAGTT-----ACTGCTCT----------------------------G---AGTAGAGAAGCTAAGGTGTA i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chrUn_GL286459 35197 34 + 372756 GAGTT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGAA i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16272663 34 + 16356641 GAGTT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGAA i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1141694 34 + 1231380 GAGTT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGAA i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2671733 34 + 11732439 GAGTT-----ACTGCTCT----------------------------G---AATAGAGAAGCTAAGATGAA i aotNan1.NW_018500483v1 I 1 C 0 s micMur3.chr18 56855395 34 + 57149010 GAGTC-----ACTGCTCT----------------------------G---AGTAGAGAAGTTAAGACGAA i micMur3.chr18 I 493 C 0 s proCoq1.NW_012150197v1 1848930 34 - 2029793 GAGTT-----ACTGCTCT----------------------------A---AGTAGAGAAGCTAAGATGAA i proCoq1.NW_012150197v1 I 1 I 272 s otoGar3.GL873542 22836718 37 + 22939663 GAGTT-----GCTGCTCT----------------------------GTGCAGCAGAGAAGCTAAGAGGAA i otoGar3.GL873542 I 1 I 6 s mm10.chr2 181783874 67 + 182113224 gagttccaagacagctattacatggtgGCATTTAAAAAGAAAGAAAG---AAACAAAAAACTAAGATAAA i mm10.chr2 I 21 C 0 s canFam3.chr24 47596898 30 + 47698779 GAGTT-----ACTGTTCT----------------------------G---AGCAGAGGAGCTAAGA---- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 235161 34 - 397369 TGGTG-----ACTGCTCT----------------------------G---AATGAAGAAACAGCAGTGAA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=273711.000000 s hg38.chr20_KI270870v1_alt 100876 25 + 183433 AAGTGTGCCAGAGAAGGCGAGAGGA------ s panTro5.chr20 66427400 25 + 66533130 AAGTGTGCCAGAGCAGGTGAGAGGA------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62102546 25 + 62195757 AAGTGTGCCAGAGCAGGTGAGAGGA------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 491879 25 - 578057 AAGTGTGCCAGAGAAGGCGAGAGGA------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016053 25 - 110113093 AAGTGTGCCAGAGAAGGCGAGAGGA------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92741615 25 - 92844088 AAGTGTGCCAGAGAAGGTGAGAGGA------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96409662 25 + 96509753 AAGTGTGCCAGAGAAGGTGAGAGGA------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880637 25 - 16982598 AAGTGTGCCAGAGAAGGTGAGAGGA------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682221 25 - 3785965 AAGTGTGCCAGAGAAGGTGAGAGGA------ i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 66814 25 - 179258 AAGTGTGCCAGAGAAGGTGAGAGGA------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552351 25 - 5823884 AAGTGTGCCAGAGAAGGTGAGAGGA------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35231 25 + 372756 AAGTGTGCCAGAGAAGGCGAGAGGA------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16272697 25 + 16356641 GAGTGTGCCAGAGAAGGCGAGAGGA------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1141728 25 + 1231380 GAGTATGCCAGAGAAGGCGAGAGGA------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2671767 25 + 11732439 GAGAGTGCCAGAGAAGGCGAGAGGG------ i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56855429 25 + 57149010 GAGTGGGCTAGAGAAGGAGGGAGGA------ i micMur3.chr18 C 0 I 250 s otoGar3.GL873542 22836761 15 + 22939663 GAGTGGGGCAGAGAA---------------- i otoGar3.GL873542 I 6 C 0 s mm10.chr2 181783941 25 + 182113224 GAATAGGCCAGCAGAGGAGGGAAGA------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47596928 19 + 47698779 -----TGCCAGACAAGA-GAGAGGA------ i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 235195 21 - 397369 ----------GAGTGGGTAGGAGGCACTGTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1848964 272 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=1910262.000000 s hg38.chr20_KI270870v1_alt 100901 236 + 183433 TGAGAAAGGGTCGACTGCC----TAGAGGACAGTGGGGCAGCAGGTGCAAGTAGAA--TCTCCTGACTAA-GAGGCTGAGGAGGGTGGCAGCAGAGGGCATAAGCCGTGGTCACAGTGTGAGAATGTCACACAGCCACAGCAGCATCGGGGTCAGCCTTCCAGAGGCTGGCTTCGGACAGGAGATGGGT--GGTGAGGAGCCAGC--ATGGGAGGGCAGTGAA-------CACACAAACC-CTGTGCATGGGACC s panTro5.chr20 66427425 238 + 66533130 TGAGAAAGGGTCGACTGCC----TAGAGGACAGTGGGGCAGCAGGTGCAAGTAGAA--TCTCCTGACTAA-GAGGCTGAGGAGGGTGGCAGCAGAGGGCATAAGCCGTGGTCACAGTGTGAGAATGTCACACAGCCACAGCAGCATCGGGGTCAGCCTTCCAGAGGCTGGCTTCGGACAGGAGATGGGT--GGTGAGGAGCCAGCATATGGGAGGGCAGTGAA-------CACACAAACC-CTGTGCATGGGACC i panTro5.chr20 C 0 I 124 s panPan2.chr20 62102571 238 + 62195757 TGAGAAAGGGTCGACTGCC----TAGAGGACAGTGGGGCAGCAGGTGCAAGTAGAA--TCTCCTGACTAA-GAGGCTGAGGAGGGTGGCAGCAGAGGGCATAAGCTGTGGTCACAGTGTGAGAATGTCACACAGCCACAGCAGCATCGGGGTCAGCCTTCCAGAGGCTGGCTTCGGACAGGAGATGGGT--GGTGAGGAGCCAGCATATGGGAGGGCAGTGAA-------CACACAAACC-CTGTGCATGGGACC i panPan2.chr20 C 0 I 124 s gorGor5.CYUI01015848v1 491904 236 - 578057 TGAGAAAGGGTCGACTGCC----TAGAGGACAGTGGGGCAGCAGGTGCAAGTAGAA--TCTCCTGACTAA-GAGGCTGAGGAGGGTGGCAGCAGAGGGGATAAGCCGTGGTCACAGTGTGAGAATGTCACACAGCCACAGCAGCATCAGGGTCAGCCTTCCGGAGGCTGGCTTCGGACAGGAGATGGGT--GGTGAGGAGCCAGC--ATGGGAGGGCAGTGAA-------CACACAAACC-CTGTGCTTGGGACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016078 236 - 110113093 TAAGAAAGAGTCGACTGCC----TAGAGGACAGTGGG---GCAGGTGCAGGTAGAA--TCTCCTGACTAAGGAGGCTGAGGAGGGTGGCAGCAGAGGGGATGAGCCATGGTCACAGTGTGAGAATGTAACACAGCCACAGCAGCATTGGGGTCAGCCTTCCAGAGGCTGGCTTAGGACAGGAGATGGGTGAGGTGAGGAGCCAGC--ATGAGAGGGCAGTGAA-------CACACAAACC-TTGTGCAGGGGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92741640 240 - 92844088 TGAGAAAGGGTCGACTGCCTAGATAGAGGACAGTGGG---GCAGGTGCAGGTGGAA--TCTCCTGACTAAGGAGGCTGAAGAGGGTGGCAGTACAGGGGATGAGCCGTGGTCACAGTGCGAGAATGTCACACAGCCATAGCAGCATCAGGGTCGGCCTTCCAGAGGCTGGCTTAGGACAGGAGACGGGTGAGGTGAGGAGCCAGC--ATGGGAGGGCAGTGAA-------CACACAAACC-CTGTGCAGGGGACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96409687 240 + 96509753 TGAGAAAGGGTCGACTGCCTAGATAGAGGACAGTGGG---GCAGGTGCAGGTGGAA--TCTCCTGACTAAGGAGGCTGAAGAGGGTGGCAGTACAGGGGATGAGCCGTGGTCACAGTGCGAGAATGTCACACAGCCATAGCAGCATCAGGGTCGGCCTTCCAGAGGCTGGCTTAGGACAGGAGACGGGTGAGGTGAGGAGCCAGC--ATGGGAGGGCAGTGAA-------CACACAAACC-CTGTGCAGGGGACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880662 240 - 16982598 TGAGAAAGGGTCGACTGCCTAGATAGAGGACAGTGGG---GCAGGTGCAGGTGGAA--TCTCCTGACTAAGGAGGCTGAAGAGGGTGGCAGTACAGGGGATGAGCCGTGGTCACAGTGCGAGAATGTCACACAGCCATAGCAGCATCAGGGTCAGCCTTCCAGAGGCTGGCTTAGGACAGGAGACGGGTGAGGTGAGGAGCCAGC--ATGGGAGGGCAGTGAA-------CACACAAACC-CTGTGCAGGGAACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682246 240 - 3785965 TGAGAAAGGGTTGACTGCCTAGATAGAGGACAGTGGG---GCAGGTGCAGGTGGAA--TCTCCTGACTAAGGAGGCTGAAGAGGGTGGCAGTACAGGGGATGAGCCGTGGTCACAGTGCGAGAATGTCACACAGCCACAGCAGCATCAGGGTCAGCCTTCCAGAGGCTGGCTTAGGACAGGAGACGGGTGAGGTGAGGAGCCAGC--ATGGGAGGGCAGTGAA-------CACACAAACC-CTGTGCAGGGGACT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 66839 240 - 179258 TGAGAAAGGGTTGACTGCCTAGATAGAGGACAGTGGG---GCAGGTGCAGGTGGAA--TCTCCTGACTAAGGAGGCTGAAGAGGGTGGCAGTACAGGGGATGAGCCGTGGTCACAGTGCGAGAATGTCACACAGCCACAGCAGCATCAGGGTCAGCCTTCCAGAGGCTGGCTTAGGACAGGAGACGGGTGAGGTGAGGAGCCAGC--ATGGGAGGGCAGTGAA-------CACACAAACC-CTGTGCAGGGGACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552376 240 - 5823884 TGAGAAAGGGTTGACTGCCTAGATAGAGGACAGTGGG---GCAGGTGCAGGTGGAA--TCTCCTGACTAAGGAGGCTGAAGAGGGTGGCAGTACAGGGGCTGAGCCGTGGTCACAGTGCGAGAATGTCACACAGCCACAGCAGCATCAGGGTCAGCCTTCCAGAGGCTGGCTTAGGACAGGAGACGGGTGAGGTGAGGAGCCAGC--ACGGGAGGGCAGCGAA-------CACACAAATC-CCGTGCAGGGGACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35256 215 + 372756 TGAGAAA-GGTCGACTGCC----CAGAGGACAGTGGG---GCTGGTGCAGGTGGCG--TCTCCTGACTTA-GGGGCTGAGGAGGGTGGCAGCACAGGTCAT------------------GAGAATGTCACACAGCTACAGCAGCACT-GGATCAGCCTTGCAGAGGCTGGCTTCGGACAGGAGACAGGTGAGGTGAGGAGCCAGC--ACGGGAGGGCAGTTAA-------CAGACAAAGC-CTGTGCCAGGGACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16272722 234 + 16356641 TGAGAAAGGGTCGACTGCC----CAGAGGACAGTGGG---GCTGGTGCAGGTGGCG--TCTCCTGCCTTA-GGGGCTGAGGAGGGTGGCAGCACAGGTGATGAGCCGTGGCCACAGTGCGAGAATGTCACACAGCCACAGCAGCACC-GGATCAGCCTTCCAGAGGCTGGCTTCGGACAGGAGACAGGTGAGGTGAGGGGCCAGC--ACGGGAGGGCGGCGAA-------CAGACACGCC-CTGTGCAGGGGACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1141753 234 + 1231380 TGAGAAAGGGTCGACTGCC----CAGAGGACAGTGGG---GCTGGTGCAGGTGGCG--TCTCCTGACTTA-GGGGCTGAGGAGGGTGGCAGCACAGGTGATGAGCCGTGGCCACAGTGCGAGAATGTCACACAGCCACAGCAGCACC-GGATCAGCCTTCCAGAGGCTGGCTTCGGACAGGAGACAGGTGAGGTGAGGAGCCCGC--ACGGGAGGGCAGCGAA-------CCGACAAACC-CTGTGCAGGGGACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2671792 231 + 11732439 TGAGAAAGGGTCCACTGCC----CAGAGGACAGTGGG---GCTGGTGCAGGTGGCGTCTCTCCTGACTTA-GGGGCT---GAGGGTGGCAGCACAGGTGATGAGCCG-GGCCACAGTGTGAGAATGTCACACAGCCACAGCAGCACC-GGATCAGCCTTCCAGAGGCTGGCTTCGGACAGGAGACAGGTGAGGTGAGGAGACAGC--ACGGGAAGGCGGCGAA-------CAGACAGACC-CTGTGC-GGGGACC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22836776 180 + 22939663 GGGGAGGATGTCAATTTCC----CAGAAGGCTCTGGG---GTTGGTGCAGGTGATT--TCT----------GAGG-------AGGTGACAGCAT-GGAGCTAAGTGGTGGCCA-------AGTGCATCCCACAGCCACAGAAGCATCAGAATCAACCTTTTGGGGGCTGACCAAAGACAGCAGGTGGGTGAAGCAAGGAACCAGC--ACAGGAGAG--------------------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181783966 157 + 182113224 TGTGAATGGACTGATGGGT----CAGA--ACTGAGGG---GTA-GCATAGGTGATT--TCCTTTGAC--A-GAGACTAAGAGAAATAGCAT---------------------------------------------------------AGGTTAG------------TGACCTAAGATGGCATGTGGGTAAGATGAGGAGCCAAC--A-GGAAGGACCGTGGAAGTGGCCCACATAA-----------TAAGATC i mm10.chr2 C 0 I 1 s canFam3.chr24 47596953 213 + 47698779 TTTGACAGGATGGATTTCC----AGAAGGACTGCAGG---GCCGGCCCAGGTGGTA--AGTGCTGACTGAGCAGGCTAGGGGAGGCTGAAGCAGGGGGC---AGTGGTGGCCACGG---GAGAGCAGCGCATCACC-CAGCAA-----GGGT-----------GGACGGACTTCCCAT-GCAGGTGGGTGAGGTGGACCTCAGTG--CCTGGAGGGCGGTGGG-------AGCAGAGCCCGGTGTGGAGGGGAGC i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 235216 185 - 397369 TGTGAAAGGGCTGATATCC----CAGGAGG-ATCAGG---GCTGGCAGGGGTG-----CCTCTTGAG----GGGGCTGGGAAGG--TGCAGGACGTGGGAGTGGGGGTGTGCAGAGAGC---AGCACCACGCAGCT---------------TTGCCATCTCAGATCCAGGCCCCGGA--------GGCCAGGGTGA-----------TTGGGAAGGGAGGGGA-------ACGGCGCACC-CCGAGGCG------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1848964 272 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855454 250 + 57149010 I a score=157248.000000 s hg38.chr20_KI270870v1_alt 101137 21 + 183433 GTCACAG------CCTGCGGCGTGCCT s panTro5.chr20 66427787 21 + 66533130 GTGACAG------CCTGCGGCGTGCCT i panTro5.chr20 I 124 C 0 s panPan2.chr20 62102933 21 + 62195757 GTGACAG------CCTGCGGCGTGCCT i panPan2.chr20 I 124 C 0 s gorGor5.CYUI01015848v1 492140 21 - 578057 GTGACAG------CCTGCGGCGTGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016314 21 - 110113093 GTGACAG------CCTGCGGCATGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92741880 21 - 92844088 GTGACAG------CCTGCGGCATGCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96409927 21 + 96509753 GTGACAG------CCTGCGGCATGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880902 21 - 16982598 GTGACAG------CCTGTGGCATGCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682486 21 - 3785965 GTGACAG------CCTGCGGCATGCCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67079 21 - 179258 GTGACAG------CCTGCGGCATGCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552616 21 - 5823884 GTGACAG------CCTGAGGCATGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35471 20 + 372756 GTGATAG------CGTGCCGCTTG-CT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16272956 20 + 16356641 GTGACAG------CCTGCCGCTTG-CT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1141987 20 + 1231380 GTGTCAG------CCTGCGGCTTG-CT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672023 20 + 11732439 GTGACAG------CCTGCGGCTTG-CT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22836956 15 + 22939663 ----CAA------CCTGCCATGTGC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784124 15 + 182113224 GTGGTA------------TGCTTGCCT i mm10.chr2 I 1 I 1 s canFam3.chr24 47597166 27 + 47698779 GGGAGGGGCCCCCCCTGCCGTGCACCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 235401 21 - 397369 CTCACAG------GCTGCTGCGAGCCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1848964 272 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855454 250 + 57149010 I a score=550883.000000 s hg38.chr20_KI270870v1_alt 101158 33 + 183433 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- s panTro5.chr20 66427808 33 + 66533130 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62102954 33 + 62195757 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492161 33 - 578057 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016335 33 - 110113093 CTGAGTTCAGCAC----CAGGCCTGTGGACAGC-TCAG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92741901 33 - 92844088 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96409948 33 + 96509753 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880923 33 - 16982598 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682507 33 - 3785965 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67100 33 - 179258 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552637 33 - 5823884 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35491 33 + 372756 CTGAGTTCAGCAC----CAGGCATGTGGACAGC-TCAG--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16272976 33 + 16356641 GTGAGTTCAGCAC----CAGGCGTGTGGACAGC-TCAG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142007 33 + 1231380 CTGAGTTCAGCAC----CAGGAGTGTGGACAGC-TCAG--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672043 33 + 11732439 CTGAGTTCAGCAC----CAGGAGTGTGGACAGC-TCAG--- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56855704 33 + 57149010 CTGAGTTCAGCAC----TAGGCGTGTGGACAGC-TCAG--- i micMur3.chr18 I 250 I 337 s proCoq1.NW_012150197v1 1849236 33 - 2029793 CTGAGTTCAGCAC----CAGGCGTATGGACAGC-TCAG--- i proCoq1.NW_012150197v1 I 272 C 0 s otoGar3.GL873542 22836971 33 + 22939663 CTGAGTTCAGCAC----TGGGCATGTGGACAGC-TCAG--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784140 37 + 182113224 CTGAACTCACTACAGTTCAGGCAGCTGGATAGC-TTAG--- i mm10.chr2 I 1 C 0 s canFam3.chr24 47597193 33 + 47698779 CTGGGTTCAGCAC----CGGGCGTGTGGACAGC-TCAG--- i canFam3.chr24 C 0 I 5 s dasNov3.JH569290 235422 36 - 397369 CTGGTTTCAGCAC----CA-GCATGTGGACAGCGCCAGGTG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=258575.000000 s hg38.chr20_KI270870v1_alt 101191 23 + 183433 GACCGGTTGGAAGGGGCTGCCAG s panTro5.chr20 66427841 23 + 66533130 GACCGGTTGGAAGGGGCTGCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62102987 23 + 62195757 GACCGGTTGGAAGGGGCTGCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492194 23 - 578057 GACCGGTTGGAAGGGGCTGCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016368 23 - 110113093 GACTGGTTGGAAGGGGCTGCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92741934 23 - 92844088 GACCGGTTGGAAGGGGCTGCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96409981 23 + 96509753 GACCGGTTGGAAGGGGCTGCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880956 23 - 16982598 GACCGGTTGGAAGGGGCTGCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682540 23 - 3785965 GACCGGTTGGAAGGGGCTGCCAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67133 23 - 179258 GACCGGTTGGAAGGGGCTGCCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552670 23 - 5823884 GACCGGTTGGAAGGGGCTGCCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35524 23 + 372756 GACCGGTTGGAAGCGGCTGCCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273009 23 + 16356641 GACCGGTTGGAAGCGGCTGCCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142040 21 + 1231380 GGCCGGTTGGAAGCGGCTGCC-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672076 23 + 11732439 GACTGGTTGGAAGCGGCTGCCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1849269 23 - 2029793 AACCACTTGGAAGGGGCTGCCAG i proCoq1.NW_012150197v1 C 0 I 198 s otoGar3.GL873542 22837004 18 + 22939663 AACT-----GAAGAGGTAGCCAG i otoGar3.GL873542 C 0 I 5 s mm10.chr2 181784177 19 + 182113224 GACCATGTGG----GGCTGTTAG i mm10.chr2 C 0 I 2 s canFam3.chr24 47597231 18 + 47698779 GGCC-----GAAGGGGCTGTTAG i canFam3.chr24 I 5 I 3 s dasNov3.JH569290 235458 22 - 397369 GTCCAG-TGGCTGGAGTTGGGGG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=123491.000000 s hg38.chr20_KI270870v1_alt 101214 12 + 183433 AA--GTCAGGTGGT s panTro5.chr20 66427864 14 + 66533130 AAAAGTCAGGTGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103010 14 + 62195757 AAAAGTCAGGTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492217 14 - 578057 AAAAGTCAGGTGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016391 14 - 110113093 AAAAGTCAGGTGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92741957 14 - 92844088 AAAAGTCAGGTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410004 14 + 96509753 AAAAGTCAGGTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880979 14 - 16982598 AAAAGTCAGGTGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682563 14 - 3785965 AAAAGTCAGGTGGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67156 14 - 179258 AAAAGTCAGGTGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552693 14 - 5823884 GAAAGTCAGGTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35547 14 + 372756 AGAAGTTAGGTGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273032 14 + 16356641 AGAAGTCAGGTGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142061 13 + 1231380 -GGAGTCAGGTGGT i cebCap1.NW_016107870v1 C 0 I 9 s aotNan1.NW_018500483v1 2672099 14 + 11732439 CGAAGTCAGGTGGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22837027 12 + 22939663 --AAGGTAGGTAGT i otoGar3.GL873542 I 5 C 0 s mm10.chr2 181784198 12 + 182113224 --AAGGCCTATGTT i mm10.chr2 I 2 C 0 s canFam3.chr24 47597252 13 + 47698779 TAGGGTCCGGGGT- i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 235480 11 - 397369 ---AGGTAGGAGGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1849292 198 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=51511.000000 s hg38.chr20_KI270870v1_alt 101226 7 + 183433 CGTGTGT s panTro5.chr20 66427878 7 + 66533130 CGTGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103024 7 + 62195757 CGTGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492231 7 - 578057 CGTGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92741971 7 - 92844088 GGCGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410018 7 + 96509753 GGCGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16880993 7 - 16982598 GGCGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682577 7 - 3785965 GGTGTGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67170 7 - 179258 GGTGTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552707 7 - 5823884 GGTGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35561 7 + 372756 GGTGTGT i calJac3.chrUn_GL286459 C 0 I 3 s saiBol1.JH378156 16273046 7 + 16356641 GGTGCGT i saiBol1.JH378156 C 0 I 3 s aotNan1.NW_018500483v1 2672113 4 + 11732439 ---GTGT i aotNan1.NW_018500483v1 C 0 I 3 s otoGar3.GL873542 22837039 7 + 22939663 AGTATGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784210 7 + 182113224 GGTACGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47597265 7 + 47698779 GGTGTGT i canFam3.chr24 C 0 I 43 s dasNov3.JH569290 235491 7 - 397369 GGAGATT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1849292 198 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e cebCap1.NW_016107870v1 1142074 9 + 1231380 I e nomLeu3.chr13 110016405 0 - 110113093 C a score=468205.000000 s hg38.chr20_KI270870v1_alt 101233 71 + 183433 C---------------GGGG--------TATGC---------AGGAGCTGATGGT-------AGCTCCTCAAC---CCCCT-----TCTTG-----------CCAAATATTC------------------------------------------------------------AGAGATATGGAATCAAG s panTro5.chr20 66427885 71 + 66533130 C---------------GGGG--------TGTGC---------AGGCACTGATGGT-------AGCTCCTCAAC---CCCCT-----TCTTG-----------CCAAATATTC------------------------------------------------------------AGAGATACAGAATCAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103031 71 + 62195757 C---------------GGGG--------TGTCC---------AGGCACTGATGGT-------AGCTCCTCAAC---CCCCT-----TCTTG-----------CCAAATATTC------------------------------------------------------------AGAGATACAGAATCAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492238 71 - 578057 C---------------GGGG--------TGTGC---------AGGCACTGATGGT-------AGCTCCTCAAC---CCCCT-----TCTTG-----------CCAAATATTC------------------------------------------------------------AGAGATACGGAATCAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016405 68 - 110113093 ------------------GG--------TGTGC---------AGGCACTGATGGT-------AGCTCCTCAAC---CCCCT-----TCTTG-----------GAAAACATTC------------------------------------------------------------AGAGATACGGAATCAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92741978 87 - 92844088 CAG------------TGGGG--------TGTGC---------AGGCACGGATGGT-------AGCTCCTCAAC---CCCCT-----TCTTG-----------CAAATTATTCAGTGGACGACTG-----------------------------------------------TAGAGATATGGAATCAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410025 87 + 96509753 CAG------------TGGGG--------TGTGC---------AGGCACTGATGGT-------AGCTCCTCAAC---CCCCT-----TCTTG-----------CAAATTATTCAGTGGACGACTG-----------------------------------------------TAGAGATATGGAATCAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881000 87 - 16982598 CAG------------TGGGG--------TGTGC---------AGGCACTGATGGT-------AGCTCCTCAAC---CCCCT-----TCTTG-----------CAAATTATTCAGTGGACGACTG-----------------------------------------------TAGAGATATGGAATCAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682584 87 - 3785965 CAG------------TGGGG--------TGTGC---------AGGCACTGATGGT-------AGCTCCTCAAC---TCCCT-----TCTTG-----------CAAATTATTCAGTGGGTGACTG-----------------------------------------------TAGAGATATGGAATCAAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67177 87 - 179258 CAG------------TGGGG--------TGTGC---------AGGCACTGATGGT-------GGCTCCTCAAC---CCCCT-----TCTTG-----------CAAATTATTCAGTGGATGACTG-----------------------------------------------TAGAGATATGGAATCAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552714 87 - 5823884 CAG------------TGGGG--------TGTGC---------AGGCACTGATGGT-------AGCTCCTCAAC---CCCCT-----TCTTG-----------GAAATTATTCAGTGGACGACCG-----------------------------------------------TAGAGATATGGAATCAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35571 84 + 372756 ---------------TGGGA--------AGTGC---------AGGTGCTGACGGT-------AACTCCTTAAC---TCCCT-----TCTTG-----------CAAAACATTCAGTGGATGACTG-----------------------------------------------TGGAGATATGGAATCATA i calJac3.chrUn_GL286459 I 3 C 0 s saiBol1.JH378156 16273056 83 + 16356641 ---------------CGGGG--------AGCGC---------AGGCGCTGGCGGT-------AGCTCCCTAAC----CCCG-----TCTTG-----------CAAAATATTCAGTGGATGGCTG-----------------------------------------------TAGAGATATGGAATCATG i saiBol1.JH378156 I 3 C 0 s cebCap1.NW_016107870v1 1142083 83 + 1231380 ---------------CAGGG--------AGCGC---------AGGCGCTGGCTGT-------AGCTCCTTAAC---CCCCG-----TCTTG-----------C-AAATATTCAGTGGATGACTG-----------------------------------------------CAGAGATATGGAATCGTG i cebCap1.NW_016107870v1 I 9 C 0 s aotNan1.NW_018500483v1 2672120 83 + 11732439 ---------------TGGGG--------AGTGC---------AGGCGCTGACGGT-------AGCTCCTTAAC----CCCT-----TCTTG-----------CAAAATATTCAGTGGATGACTG-----------------------------------------------TAGAGGTGTGGAACCATG i aotNan1.NW_018500483v1 I 3 C 0 s otoGar3.GL873542 22837046 95 + 22939663 -TA------------GGGGG--------AGTGC---------AGGCTTTCCTGGCACAAAAAAGCACCACTATGGGCTCCA-----AATTG-----------CATAA-ATCCAGTGGATGACTA-----------------------------------------------TAGAATTATGAAGTCAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784217 89 + 182113224 ---------------TAGGGGAAACC-ATGTGCTAGTATGTTAGGCACAGATGGT-------GAACCTTGAAT---GCCTTCTGAACCTTA-----------AAGAATA---------------------------------------------------------------AAACCTTTGGTCCCAAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47597315 156 + 47698779 CAACTTAAGGAGAATAGGAG--------TAGGT---------AGGCATTGACTGT-------AGGTCCTTAAA---CCACT-----GCGTGACCTT-AAGAATGAAACATTGGAggggcgcctgggtggttcagtcggtggagcgtctgcctttgactcaggtcatgatcccagggccttgggatctag i canFam3.chr24 I 43 I 185 s dasNov3.JH569290 235498 99 - 397369 ---------------TGGGGAAGGCCTGGGCAC---------CTGCATCGATGGT-------AGTTCCTTACA---ATCCT-----TTTTGGCCTTGAAGAATAAAATATTT----GGGTGCTG-----------------------------------------------CAGATCTAAGGCATCCAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1849292 198 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=440695.000000 s hg38.chr20_KI270870v1_alt 101304 61 + 183433 GAAAAGATCAGTT----GCATGG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGCAGGAGGT s panTro5.chr20 66427956 61 + 66533130 GAAAAGATCAGTT----GCATGG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGCAGGGGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103102 61 + 62195757 GAAAAGATCAGTT----GCATGG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGCAGGGGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492309 61 - 578057 GAAAAGATCAGTT----GCATGG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGCAGGGGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016473 61 - 110113093 GAAAAGATCAGTT----GCATGG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGTAGGGGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742065 61 - 92844088 GAAAAGATCAGTT----GCATAG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGCAGGGGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410112 61 + 96509753 GAAAAGATCAGTT----GCATAG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGCAGGGGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881087 61 - 16982598 GAAAAGATCAGTT----GCATAG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGCAGGGGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682671 61 - 3785965 GAAAAGATCAGTT----GCATAG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGCAGGGGGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67264 61 - 179258 GAAAAGATCAGTT----GCATAG-----CCATTCAGCCAGCCCTTCT-TCCTGCCACCCAGGGCAGGGGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552801 61 - 5823884 GAAAAGATCAGTT----GCATAG-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAGGGCAGGGGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35655 60 + 372756 AAAAAGGGCAATT----GCATGA-----CCATTCAGCCAACACTTCT-TCTGC-CACCCAAGGCAGGGGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273139 65 + 16356641 AAAAAGGTCAATTGCACGCACGA-----CCATTCAGCCAACCCTTCT-TCCCCTTGCCCAAGGCAGGGGAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142166 21 + 1231380 AGAAAGGTCAATT----GCACGA-----CC----------------------------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672203 61 + 11732439 AAAAAGGTCAATT----GCATGA-----CCATTCAGCCAACCCTTCT-TCCTGCCACCCAAGGCAGGGGAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22837141 56 + 22939663 GAGAAGGGTGATT----GCATGG-----GCATTTAGTCAGTACTTTT-TTCTGCCAC-----GTGGGAGGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784306 39 + 182113224 GCATACACTACTT----A-GTGG-----ACAATTAGTTA-------------------TGAAACAAGG--- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 235597 63 - 397369 GAGAAATCTGGTG----ATAGGAAAGGTCCTGCCAGCCTACCTTCCTGTCCCCCCACCCCGAGTGAA---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1849292 198 - 2029793 I e canFam3.chr24 47597471 185 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=120989.000000 s hg38.chr20_KI270870v1_alt 101365 9 + 183433 GCCTCTGGC s panTro5.chr20 66428017 9 + 66533130 GCCTCTGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103163 9 + 62195757 GCCTCTGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492370 9 - 578057 GCCTCTGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016534 9 - 110113093 GCCTCTGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742126 9 - 92844088 GCCTCTGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410173 9 + 96509753 GCCTCTGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881148 9 - 16982598 GCCTCTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682732 9 - 3785965 GCCTATGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67325 9 - 179258 GCCTCTGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552862 9 - 5823884 GCCTCTGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35715 9 + 372756 GCCTCTGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273204 9 + 16356641 GCCTCTGGC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2672264 9 + 11732439 GCCTCTGGC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1849490 9 - 2029793 GCCTCTGGC i proCoq1.NW_012150197v1 I 198 C 0 s otoGar3.GL873542 22837197 9 + 22939663 GCCTCTGGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784345 9 + 182113224 ATCTCTGGT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 235660 9 - 397369 GCCTCTGTC i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47597471 185 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e cebCap1.NW_016107870v1 1142187 0 + 1231380 C a score=289977.000000 s hg38.chr20_KI270870v1_alt 101374 30 + 183433 AAGGACTACTGGAC--AGAGG-----------CTCCTGCAAGG s panTro5.chr20 66428026 30 + 66533130 AAGGACTACTGGAC--AGAGG-----------CTCCTGCAAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103172 30 + 62195757 AAGGACTACTGGAC--AGAGG-----------CTCCTGCAAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492379 30 - 578057 AAGGACTGCTGGAC--AGAGG-----------CTCCTACAAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016543 30 - 110113093 AAGGACTACTGGAT--AGAGG-----------CTCCTGCAAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742135 30 - 92844088 AAGGACTACTGGAT--AGAGG-----------CTCCTGCAAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410182 30 + 96509753 AAGGACTACTGGAT--AGAGG-----------CTCCTGCAAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881157 30 - 16982598 AAGGACTACTGGAT--AGAGG-----------CTCCTGCAAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682741 30 - 3785965 AAGGACTACTGGAT--AGAGG-----------CTCCTGCAAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67334 30 - 179258 AAGGACTACTGGAT--AGAGG-----------CTCCTACAAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552871 32 - 5823884 AAGGACTACTGGATAGAGAGG-----------CTCTTGCGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35724 30 + 372756 AAGGGCGACTGGAT--AGAGG-----------CTCCTGCAAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273213 30 + 16356641 AAGGGTGACTGGAT--AGAGG-----------CTCCTGCGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142187 29 + 1231380 -AGGGCGACGGGGT--AGAGG-----------CTCCTGCTTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672273 30 + 11732439 AAGGGCCACTGGAC--AGAGG-----------CTCCTGCAAGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1849499 30 - 2029793 CAGGACGACCGGAT--AGAGG-----------CTCCTGCAAGG i proCoq1.NW_012150197v1 C 0 I 45 s otoGar3.GL873542 22837206 7 + 22939663 AAGTAAG------------------------------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784354 29 + 182113224 AAGGACAATTAAAC--AGAAG-----------TAACTTCAGG- i mm10.chr2 C 0 C 0 s canFam3.chr24 47597656 41 + 47698779 AAGGTTGATTGCAT--AGAGGTTTAGCCGTCCTTCCTGAAAGG i canFam3.chr24 I 185 C 0 s dasNov3.JH569290 235669 30 - 397369 AAGGACGACAGGGC--AGATG-----------CTCCTGCTTAA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=284607.000000 s hg38.chr20_KI270870v1_alt 101404 36 + 183433 GAAGGAGCTGCCACTGGGTATGGCC------CTTCTGG----CCTC s panTro5.chr20 66428056 36 + 66533130 GAAGGAGCTGCCACTGGGTATGGCC------CTTCTGG----CCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103202 36 + 62195757 GAAGGAGCTGCCACTGGGTATGGCC------CTTCTGG----CCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492409 36 - 578057 GAAGGAGCTGCCACTGGGTATGGCC------CTTCTGG----CCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016573 36 - 110113093 GAAGGAGCTGCCACTGGGTATGGCC------CTTCTGG----CCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742165 40 - 92844088 GAAGGAACTGCCACTGGGTATGGCC------CTTCTGGCTTGCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410212 40 + 96509753 GAAGGAACTGCCACTGGGTATGGCC------CTTCTGGCTTGCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881187 40 - 16982598 GAAGGAACTGCCACTGGGTATGGCC------CTTCTGGCTTGCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682771 40 - 3785965 GAAGGAACTGCCACTGGGTATGGCC------CTTCTGGCTTGCCTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67364 40 - 179258 GAAGGAACTGCCACTGGGTATGGCC------CTTCTGGCTTGCCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552903 40 - 5823884 GAAGGAACTGCCACTGGGTATGGCC------CTTCTGGCTTACCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35754 39 + 372756 GAAGGAGCTGCCACAGGGTGTGGCCATTCTGCTT---G----CCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273243 33 + 16356641 GAAGACGCTGCCGCTGGGTGTGGCC------CTT---G----CCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142216 33 + 1231380 GAAGGAGCTGCCGCTGGGTGTGGCC------CTT---G----CCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672303 36 + 11732439 GAAGGAGCTGCCCCTGGGTGTGGCC------CTTCCAG----ACCC i aotNan1.NW_018500483v1 C 0 I 3 s otoGar3.GL873542 22837213 28 + 22939663 ------------ACTGGGTGTGTCC------CTTCTGGCCTGCCTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784383 31 + 182113224 GATGGAGGTAACTCTCTTTTTTAGC------TGTCTG--------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47597697 33 + 47698779 -GAGGGGGTACCACTGAGCCTGATC------TTTT--G----ACTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 235699 30 - 397369 GGGGGA----------GGTACGGCT------TTTCTGGCCGAACTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1849529 45 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=47726.000000 s hg38.chr20_KI270870v1_alt 101440 6 + 183433 TCTTTA s panTro5.chr20 66428092 6 + 66533130 TCTTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103238 6 + 62195757 TCTTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492445 6 - 578057 TCTTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016609 6 - 110113093 TCTTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742205 6 - 92844088 ACTTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410252 6 + 96509753 ACTTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881227 6 - 16982598 ACTTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682811 6 - 3785965 ACTTGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67404 6 - 179258 ACTTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552943 6 - 5823884 ACTTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35793 6 + 372756 ACTTGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273276 6 + 16356641 ACTTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142249 6 + 1231380 ACTTGA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22837241 6 + 22939663 ACTTAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784414 6 + 182113224 ACTTGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47597730 6 + 47698779 ACTGGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 235729 6 - 397369 ATTCAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1849529 45 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e aotNan1.NW_018500483v1 2672339 3 + 11732439 I a score=55539.000000 s hg38.chr20_KI270870v1_alt 101446 4 + 183433 TGTT s panTro5.chr20 66428098 4 + 66533130 TGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103244 4 + 62195757 TGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492451 4 - 578057 TGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016615 4 - 110113093 TGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742211 4 - 92844088 TGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410258 4 + 96509753 TGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881233 4 - 16982598 TGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682817 4 - 3785965 TGTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67410 4 - 179258 TGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552949 4 - 5823884 TGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35799 4 + 372756 TGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273282 4 + 16356641 TGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142255 4 + 1231380 TGTT i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1849574 4 - 2029793 TGTT i proCoq1.NW_012150197v1 I 45 C 0 s otoGar3.GL873542 22837247 4 + 22939663 TGTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784420 4 + 182113224 TGTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47597736 4 + 47698779 TGTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 235735 4 - 397369 CATT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e aotNan1.NW_018500483v1 2672339 3 + 11732439 I a score=566452.000000 s hg38.chr20_KI270870v1_alt 101450 46 + 183433 GTTGGATT-------------------------CTACCCTG-GGTGGGTATAAATTCCATTTATGCTG--GAGT s panTro5.chr20 66428102 46 + 66533130 GTTGGATT-------------------------CTACCCTG-GGTGGGTATAAATTCCATTTATGCTG--GAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103248 46 + 62195757 GTTGGATT-------------------------CTACCCTG-GGTGGGTATAAATTCCATTTATGCTG--GAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492455 46 - 578057 GTTGGATT-------------------------CTACCCTG-GGTGGGTATAAATTCCGTTTATGCTG--GAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016619 46 - 110113093 GTTGGATT-------------------------CTACCCTG-GGTGGGTATAAATTCCATTTATGCTG--GAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742215 46 - 92844088 GTTGGATT-------------------------CTACCCTG-GGTGGGTATAAATTCCATTTATGCTG--GAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410262 46 + 96509753 GTTGGATT-------------------------CTACCCTG-GATGGGTATAAATTCCATTTATGCTG--GAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881237 46 - 16982598 GTTGGATT-------------------------CTACCCTG-GATGGGTATAAATTCCATTTATGCTG--GAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682821 46 - 3785965 GTTGGATT-------------------------CTACCCTG-GGTGGGTATAAATTCCATTTATGCTG--GAGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67414 46 - 179258 GTTGGATT-------------------------CTACCCTG-GGTGGGTATAAATTCCATTTATGCTG--GAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552953 46 - 5823884 GTTGGATT-------------------------CTACCCTG-GGTGGGTATAAATTCCATTTATGCTG--GAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35803 46 + 372756 GCAGGAGT-------------------------CTGCCCTG-GGTAGGTGTGAATTCCACTTATGCTG--GGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273286 46 + 16356641 ACTGGAGT-------------------------CCGCCCTG-GGTGGGTGTGAATTCCACTTATGCTG--GGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142259 46 + 1231380 GCTGGAGT-------------------------CCGCCCTG-GGTGGGTGTGAATTCCACTTATGCTG--GGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672342 46 + 11732439 GCTGGAGT-------------------------CTGCCCTG-GGTGGGTGTAAACTCCACGTATGCTG--GGGT i aotNan1.NW_018500483v1 I 3 C 0 s proCoq1.NW_012150197v1 1849578 48 - 2029793 GCTGGATT-------------------------CTACCCTG-GGTGGGTAGAAGTTCCATTAATGCTGGAGTTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22837251 46 + 22939663 GCTGGATG-------------------------TTACCTTG-GGTGGGTAGAAATTCTGTTAATGCTG--ATTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784424 71 + 182113224 GTTGGATCAACAACCTGGAGAGATACAAACCAGTGACCCTG-GAGAGATACAAATTCCATTTATAACT--AAgt i mm10.chr2 C 0 I 124 s canFam3.chr24 47597740 48 + 47698779 GCTAGATT------------------------TCTACCCTGAGGTAGATGGAAATTCTACTTATGTTG--GAGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 235739 44 - 397369 GCTGCAAA---------------------------ACCCTG-GGTGGGTAGAAATTCCACTTACGCTG--GAGT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=201772.000000 s hg38.chr20_KI270870v1_alt 101496 16 + 183433 TTTTAACAGACGGTTG s panTro5.chr20 66428148 16 + 66533130 TTTTAACAGACAGTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103294 16 + 62195757 TTTTAACAGACGGTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492501 16 - 578057 TTTTAACAGACGGTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016665 16 - 110113093 TTTTAACAGACGGTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742261 16 - 92844088 TTTTAACAGATGGATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410308 16 + 96509753 TTTTAACAGACGGATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881283 16 - 16982598 TTTTAACAGACGGATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682867 16 - 3785965 TTTTAACAGACGGATG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67460 16 - 179258 TTTTAACAGACGGATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5552999 16 - 5823884 TTTTAACAGACGGATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35849 16 + 372756 TTTTAACAGATGGTTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273332 16 + 16356641 TTTTAACAGATGGATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142305 16 + 1231380 TTTTAACAGATGGATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672388 16 + 11732439 TTTTAACAGATGGATG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1849626 16 - 2029793 TTTGAACAGGTGGGTG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22837297 16 + 22939663 TTTTAACAGGTGGGTG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47597788 16 + 47698779 TTTAAACAGGCGGACC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 235783 16 - 397369 TTTTAACAGATGGAAG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181784495 124 + 182113224 I e micMur3.chr18 56855737 337 + 57149010 I a score=690452.000000 s hg38.chr20_KI270870v1_alt 101512 59 + 183433 CAGATATGGCTGCTTCATCAGGG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAA-T- s panTro5.chr20 66428164 59 + 66533130 CAGATATGGCTGCTTCATCAGAG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAA-T- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103310 59 + 62195757 CAGATATGGCTGCTTCATCAGGG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAA-T- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492517 59 - 578057 CAGATATGGCTGCTTCATCAGGG---------------------CATCCATTATGTAGCTCTAATTT-TTGATTTGGGAA-T- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016681 59 - 110113093 CAGATATGGCTGCTTCATCAGGG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAG-A- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742277 59 - 92844088 CAGATATGGCTGCTTCATCAGGG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAG-T- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410324 59 + 96509753 CAGATATGGCTGCTTCATCAGGG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAG-T- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881299 59 - 16982598 CAGATATGGCTGCTTCATCAGGG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAG-T- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682883 59 - 3785965 CAGATATGGCTGCTTCATCAGGG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAG-T- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67476 59 - 179258 CAGATATGGCTGCTTCATCAGGG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAG-T- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553015 59 - 5823884 CAGATATGGCTGCTTCATCAGGG---------------------TATCCATTATGTAGCTCTAATTT-TTGATTTGGGAG-T- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35865 59 + 372756 CAGATGTGGCTGCTTCACCAGGG---------------------TACCCATTACGTAGGTATAATTC-TTAATTTGGGAG-T- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273348 59 + 16356641 CAGATATGGCTGCTTCAGCAGGG---------------------TACCCATTACGTAAACATAATTC-TTAATTTGGGAG-T- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142321 59 + 1231380 CAGATATGGCTGCTTCACCAGGG---------------------TACCCATTACGTAGGCATAATTC-TTAATTTGGGAG-T- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672404 59 + 11732439 CAGATATGGCTGCTTCACCAGGG---------------------TACCCATTACGTAGGCATAATTC-TTAATTTGGGAG-T- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1849642 60 - 2029793 CAGATACAGCTGCTTCATCAAGG---------------------TGTCTGTTATGTAGCTGTAATTT-TTAATTTGGGGGTT- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22837313 74 + 22939663 CATATATGCCTGCTTCATCAAGGTATTATAGCTACATCAATGCCTGTCCATTATGTAGCTA--------TAATTTGGGGGCT- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784619 56 + 182113224 CAGATATGACTGCTTTACCAGGT---------------------AGCCTAAT---TGGTTATAATTT-TTATTTAGGGGT-T- i mm10.chr2 I 124 C 0 s canFam3.chr24 47597804 59 + 47698779 CATACGTAGCTGCTTCACTAGGG---------------------TGTCTACTGTACAGCTATAatttatttatttgaagg--- i canFam3.chr24 C 0 I 461 s dasNov3.JH569290 235799 60 - 397369 CAGACATGGCTTTTTCATTAGGA---------------------CTTCTATTGTAGAGCTGTGATTT-GTGACCTTGGGG-TT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=1045442.000000 s hg38.chr20_KI270870v1_alt 101571 79 + 183433 GAAGTGAGCCAGTATCCCATGCTTAGAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG s panTro5.chr20 66428223 79 + 66533130 GAAGTGAGCCAGTATCCCATGCTTAGAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103369 79 + 62195757 GAAGTGAGCCAGTATCCCATGCTTAGAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492576 79 - 578057 GACGTGAGCCAGTATCCCATGCTTACAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016740 78 - 110113093 GAAGTGAGCAAGTATCCCATGCTTAGAGCTGTCATGAGAA-CCC--TTCTCAGACATGTGTTAGATGATGCCCCATGGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742336 79 - 92844088 GAAGTGAGCCAGTATCCCATGCTTAGAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410383 79 + 96509753 GAAGTGAGCCAGTATCCCATGCTTAGAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881358 79 - 16982598 GAAGTGAGCCAGTATCCCATGCTTAGAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3682942 79 - 3785965 GAAGTGAGCCAGTATCCCATGCTTAGAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67535 79 - 179258 GAAGTGAGCCAGTATCCCATGCTTAGAGCTGTCAAGGGAACCCC--TTCTCAGACATATGTTAAATAATGCCCCATGGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553074 79 - 5823884 GAAGTGAGCCAGTATCCCACGCTTAGAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 35924 79 + 372756 GAAGTGAGCCAGTAGCCCATGCTTACAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273407 79 + 16356641 GAAGTGAGCCAGTATCCCATGTTTAGAGCTGTCAAGAGAACCCC--TTCTCAGACATGTGTTAAATAATGCCCCATGGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142380 79 + 1231380 GAAGTGAGCCAGTATCCCATGCTTAGAGGTGTCAAGAGAACCCC--TTCTCAGACATGCGTTAAATAATGACCCATGGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672463 79 + 11732439 GAAGTGAGCCAGTATCCCATGCTTAGAGCTGTCGAGAGAACCCC--TTCTCAGACGTGTTTTAAATAATGCCCCATGGAGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1849702 76 - 2029793 GGAGGAAGCCAGAATCCCGTGATTGGGGCTGTGAGGAGAATCCC--TCCTAAGACGTG--TTAAATAATGCTCCATGGGG- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22837387 77 + 22939663 GGAGTAAGCCAGAATCCCATGATTAGAGTAGTCAGGAGAATCTC--TCCTAAGACATG--TTAAATAATCTCCCATGGGgg i otoGar3.GL873542 C 0 I 117 s mm10.chr2 181784675 81 + 182113224 GGAGTGAGCCCAGATCTGATGTTTAGAACTGTCAAAGATACCCCCATCCTGAGGCATTTTCTGAATAATGTCTCATGGGTA i mm10.chr2 C 0 I 1 s canFam3.chr24 47598324 78 + 47698779 GGAGTGAGCCACAGTCCTCTGCTCAGAGATGTTAGGAGGATCCC--TCCTAAGACATGTGTTAAGTAATGCTCCATGGGG- i canFam3.chr24 I 461 C 0 s dasNov3.JH569290 235859 77 - 397369 GGAGTGAGCCATGGTCCCATGTCGAAGGATGTCAGGAGAGTC----TCCTGAGATGTGAGTTTAGTAACATCGCATGGTGG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=418939.000000 s hg38.chr20_KI270870v1_alt 101650 34 + 183433 TGTCCTTTCTATACCCCAAGGAGGAG------------GCTGGTCT s panTro5.chr20 66428302 34 + 66533130 TATCGTTTCTATACCCCAAGGAGGAG------------GCTGGTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103448 34 + 62195757 TGTCGTTTCTATACCCCAAGGAGGAG------------GCTGGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492655 34 - 578057 TGTCCTTTCTATACCCCAAGGAGGAG------------GCTGGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016818 34 - 110113093 TGTCCTTTCTGTACCCCAAGGAGGAG------------GCTGGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742415 34 - 92844088 TGTCCTTTCTGTATTCCAAGGAGGAG------------GCTGGTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410462 34 + 96509753 TGTCCTTTCTGTATTCCAAGGAGGAG------------GCTGGTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881437 34 - 16982598 TGTCCTTTCTGTATTCCAAGGAGGAG------------GCTGGTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683021 34 - 3785965 TGTCCTTTCTGTATTCCAAGGAGGAG------------GCTGGTCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67614 34 - 179258 TGTCCTTTCTGTATTCCAAGGAGGAG------------GCTGGTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553153 34 - 5823884 TGTCCTTTCTATATTCCAAGGAGGAG------------GCTGGTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36003 34 + 372756 TGTCCTTTCAATGTCCTAAGGAGGAG------------GCTGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273486 34 + 16356641 TGTCCTTTCAATGCCCTAAGGAGGAG------------GCTGGTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142459 34 + 1231380 TGCCCTTTCAATGCCCTAAGGAGGAG------------GCTGGTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672542 34 + 11732439 TGTCCTTTCAATGCCCTAAGGAGGAG------------GCTGGTGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1849778 34 - 2029793 TGTCCTTTCTGTACCCCAAGGAGGAG------------GCGGGTCT i proCoq1.NW_012150197v1 C 0 I 143 s otoGar3.GL873542 22837581 34 + 22939663 TGTCCTTTCTCTACCCCAAGGAGGAG------------GCAGATCT i otoGar3.GL873542 I 117 C 0 s mm10.chr2 181784757 33 + 182113224 TGACATTTCTATATCAC-AGGAAGTG------------GCAGGTCT i mm10.chr2 I 1 I 11 s canFam3.chr24 47598402 34 + 47698779 TGTCCTTTTTACAAAGCAAGGAAAAG------------CCTGTCGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 235936 46 - 397369 TGTCCTTTCTACAGCCCAGGGAGAGGCAGGTGACAGCCGCTGGTTT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=908421.000000 s hg38.chr20_KI270870v1_alt 101684 93 + 183433 ATTCTGCTG--------------AAT--TTGT----TGGGAGAATTTC---AG-------AATTTCAGACATGCAACAGGACATCACCCAATGTGA-GGACAGAACTATCTCTGCAAGGAACCA s panTro5.chr20 66428336 93 + 66533130 ATTCTGCTG--------------AAT--TTGT----TGGGAGAATTTC---AG-------AATTTCAGACATGCAACAGGACATCACCCAATGTGA-GGACAGGACTATCTCTGCAAGGAACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103482 93 + 62195757 ATTCTGCTG--------------AAT--TTGT----TGGGAGAATTTC---AG-------AATTTCAGACATGCAACAGGACATCACCCAATGTGA-GGACAGGACTATCTCTGCAAGGAACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492689 93 - 578057 ATTCTGCTG--------------AAT--TTGT----TGGGAGAATTTC---AG-------AATTTCAGACATGCAACAGGACATCACCCAATGTAG-GGACAGAACTATCTCTGCAAGGAACCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016852 93 - 110113093 ATTCTGCTG--------------AAT--TTGT----CAGGAGAATTTC---AG-------AATTTCAGACATGCAACAAGACATCACCCAATGTGG-GGACAGAACTGTCTCTGCAAGAAACCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742449 92 - 92844088 ATTCTGCTG--------------AAT--TTGT----CAGGAGAATTTC---AG-------AATTTCAGACATGCAACAGGA-ATCACCCAATGTGG-GGACAGAACTATCTCTGCAAGGAACCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410496 92 + 96509753 ATTCTGCTG--------------AAT--TTGT----CAGGAGAATTTC---AG-------AATTTCAGACATGCAACAGGA-ATCACCCAATGTGG-GGACAGAACTATCTCTGCAAGGAACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881471 92 - 16982598 ATTCTGCTG--------------AAT--TTGT----CAGGAGAATTTC---AG-------AATTTCAGACACGCAACAGGA-ATCACCCAATGTGG-GGACAGAACTATCTCTGCAAGGAACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683055 92 - 3785965 ATTCTGCTG--------------AAT--TTGT----CAGGAGAATTTC---AG-------AATTTCAGACATGCAACAGGA-ATCACCCAATGTGG-GGACAGAACTATCTCTGCAAGGAACCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67648 92 - 179258 ATTCTGCTG--------------AAT--TTGT----CAGGAGAATTTC---AG-------AATTTCAGACATGCAACAGGA-ATCACCCAATGTGG-GGATAGAACTATCTCTGCAAGGAACCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553187 91 - 5823884 ATTCTGCCG--------------AAT--TTGT----CAGGAGAATTTC---AG-------AATTTCAGACATGCAACAGGA-ATCACCCAATGTGG-GG-CAGAACTATCTCTGCAAGGAACCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36037 93 + 372756 AATCTGCTG--------------AAT--TTGT----CAGGAGAATTTC---AG-------AATTTCAGATGTGCAACAGGACATCACCCAATGTGG-AGAGAGAACTATCACTACAAGGAACCA i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16273520 93 + 16356641 AATCTGCTG--------------AAT--TCGT----CAGGAGGATTTC---AG-------AATTTCAGACATGAATCAGGACATCACCCAATGTGG-AGACAGAACTGTCACTACCAGGAACCA i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1142493 93 + 1231380 AATCTGCTG--------------AAT--TTGT----CAGGAGAATTTT---AG-------AATTTCAGACATGCAACAGGACATCACCCAATGTGG-AGACAGAACTATCACTACAAGGAACCA i cebCap1.NW_016107870v1 C 0 I 20 s aotNan1.NW_018500483v1 2672576 85 + 11732439 AATCTGCTG--------------AAT--TTGT----CAGG-----------AG-------AATTTCAGACACGCAACAGGACATCACCCACTGTGG-AGACAGAACTATCACTACAAGGAACCA i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22837615 102 + 22939663 ATACAGCTGCAAGCA--------GAT--TAAA----CCATGGAGTCTCAGGAG-------AATTTCAGACATGTATCATAT-ATCCTCCAAAGGGGAGGACAGAGCTGTGACTGCAAGGAACCA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181784801 98 + 182113224 AGTAGATTG--------------TATAATTGG----TGGAAGAA---C---AGTGAGGGTAATGTCAGACATGTATTAGGATATACCCCAAAG-GG-GAACAGAACTACCATTGCAAAGACCCA i mm10.chr2 I 11 I 1 s canFam3.chr24 47598436 109 + 47698779 ATTCAGCTGCCAGTAGGTCGAACAAT--GAAT----GGGTGGAATGTCAGGAG-------AGTTTCAGAGACACAGTGGGA-AGCCCCCAAAGGGG-GGACAGAACTATCATTTCAAGGAACCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 235982 100 - 397369 ATTCAGCTGTCAGT---------AGG--TTGCACAATGGGTGGATGTG---AG-------AAGTTCAGGCATACAGTGGCC-ATCTCCCAGAGGAG-GGGCCAGAGGCTCACTGCGAGGAACT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1849812 143 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=82146.000000 s hg38.chr20_KI270870v1_alt 101777 14 + 183433 AGGGTACTGTGATG s panTro5.chr20 66428429 14 + 66533130 AGGGTACGGTGATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103575 14 + 62195757 AGGGTACTGTGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492782 14 - 578057 AGGGTACTGTGATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016945 14 - 110113093 AGGGTACTGTGATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742541 14 - 92844088 GGGGTACTGTGATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410588 14 + 96509753 GGGGTACTGTGATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881563 14 - 16982598 GGGGTACTGTGATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683147 14 - 3785965 GGGGTACTGTGATG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67740 14 - 179258 GGGGTACTGTGATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553278 14 - 5823884 GGGGTACTGTGATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36131 5 + 372756 GGGGT--------- i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16273614 5 + 16356641 GGGGT--------- i saiBol1.JH378156 I 1 C 0 s aotNan1.NW_018500483v1 2672662 5 + 11732439 GGGGT--------- i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22837718 13 + 22939663 GGAGTGCTGCAAT- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181784900 14 + 182113224 GAAGTACTATGATG i mm10.chr2 I 1 C 0 s canFam3.chr24 47598545 14 + 47698779 GGGGTGCTGGGAGG i canFam3.chr24 C 0 I 5 s dasNov3.JH569290 236082 13 - 397369 GGGGTGCTGGAGT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1849812 143 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e cebCap1.NW_016107870v1 1142586 20 + 1231380 I a score=159694.000000 s hg38.chr20_KI270870v1_alt 101791 19 + 183433 GCTGCCAGTGGGGA--TCAGG s panTro5.chr20 66428443 19 + 66533130 GCTGCCAGTGGGGA--TCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103589 19 + 62195757 GCTGCCAGTGGGGA--TCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492796 19 - 578057 GCTGCCAGTGGGGA--TCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016959 19 - 110113093 GCTGCCAGTGGGGT--TCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742555 19 - 92844088 GCTGCCAGTGGGGT--GCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410602 19 + 96509753 GCTGCCAGTGGGGT--GCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881577 19 - 16982598 GCTGCCAGTGGGGT--GCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683161 19 - 3785965 GCTGCCAGTGGGGT--GCAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67754 19 - 179258 GCTGCCAGTGGGGT--GCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553292 19 - 5823884 GCTGCCAGTGGGGT--GCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36136 19 + 372756 GCTCCCAGTGGGGC--GCAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273619 19 + 16356641 GCTCCCAGTGGGGT--GCAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142606 19 + 1231380 GCTCCCAGTGGGGC--GCAGG i cebCap1.NW_016107870v1 I 20 C 0 s aotNan1.NW_018500483v1 2672667 19 + 11732439 GCTCCCAGTGGGGC--ACAGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22837731 20 + 22939663 GCTATTTTTGGGGTGGGCAG- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181784914 19 + 182113224 ACTCCTAGCGGGAT--ATAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47598564 19 + 47698779 GGTGAGGGAGGAGG--TCAGG i canFam3.chr24 I 5 C 0 s dasNov3.JH569290 236095 7 - 397369 -----------ACT--TTAG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1849812 143 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=649724.000000 s hg38.chr20_KI270870v1_alt 101810 59 + 183433 GGTGAGGGCATAT-GGTTTAGCCTCAGAGATCAAGAGAGTGGAAAGCAGGATGTGTGCTG s panTro5.chr20 66428462 59 + 66533130 GGTGAGGGCATAT-GGTTTAGCCTCAGAGATCAAGAGAGTGGAAAGCAGGATGTGTGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103608 59 + 62195757 GGTGAGGGCATAT-GGTTTAGCCTCAGAGATCAAGAGAGTGGAAAGCAGGATGTGTGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492815 59 - 578057 GGTGAGGGCATAT-GGTTTAGCCTCAGAGATCAAGAGAGTGGAAAGCAGGATGTGTGCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110016978 59 - 110113093 GGTGAGGGCATAT-GGTTTAGCCTCAGAGAGCAAGAGAGTGGAAAGCAGGATGTGTGCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742574 59 - 92844088 GGTGAGGGCATAT-GGTTTAGCCTCAGAGATCTAGAGAGTGGAAAGCAGGATGTGTGCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410621 59 + 96509753 GGTGAGGGCATAT-GGTTTAGCCTCAGAGATCTAGAGAGTGGAAAGCAGGATGTGTGCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881596 59 - 16982598 GGTGAGGGCATAT-GGTTTAGCCTCAGAGATCTAGAGAGTGGAAAGCAGGATGTGTGCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683180 59 - 3785965 GGTGAGGGCATAT-AGTTTAGCCTCAGAGATCTAGAGAGTGGAAAGCAGGATGTGTGCCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67773 59 - 179258 GGTGAGGGCACAT-AGTTTAGCCTCAGAGATCTAGAGAGTGGAAAGCAGGATGTGTGCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553311 59 - 5823884 GGTGAGGGCATAT-GGTTTAGCCTCAGAGATCTAGAGAGTGGAAAGCAGGATGTGTACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36155 59 + 372756 GGTGAGGGCTCAT-GGTTTAGCCTCAGAGATCAAGGGAGTAGAAAGCAGGATGTGTGTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273638 59 + 16356641 GGTGAGGGCTCAT-GGTTTAGCCTCAGAGATCAAGAGTGTGGAAAGCAGGGTGTGTGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142625 59 + 1231380 GGTGAGGGCTCGT-GGTTTAGCCTCAGAGACCAAGAGAGTGGAAAGCAGGATGTGAGCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672686 58 + 11732439 GGTGAAGGCTCAGAGATTTAGCCTCAGAGATCAAGA--GTGGAAAGCAGGATGTGTGCCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1849955 59 - 2029793 GGTGGGGGCATGT-ACTTTGGCCTCAGAGATCCAGAGAAAGGAAAGCAGGAAGTGTGCTG i proCoq1.NW_012150197v1 I 143 I 1396 s otoGar3.GL873542 22837751 59 + 22939663 GGTGAGGACATGT-AGATTGGCCTCAAAGATCCAGAGAATGGAAAACAGGATGCCTGTTG i otoGar3.GL873542 C 0 I 9 s mm10.chr2 181784933 40 + 182113224 GGCACGGGCACAT-GGTTTA-------------------TAGGAAGTAGAATGTACTTCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47598583 58 + 47698779 GCTGTGGGCATAT-GGTTTAGCCTCACAGGTC-GGAGAGTGGAAAGCTGAATGTGTGCAG i canFam3.chr24 C 0 I 10 s dasNov3.JH569290 236102 24 - 397369 --------------GGTG----CTTAGAAA-----------GGAGGCAGGAGA------- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=624221.000000 s hg38.chr20_KI270870v1_alt 101869 119 + 183433 AGGTCACCGACTTTCTATA----TCT--------------GTTCTGTGGGC-------TGAGCTGGCAGGCAGGTCCATGCACCAAAGAAAGGGAAG--GGGAG-----GGCTGT------------GGATGCAG---------------------------------CAGAAGATCC-TCCTG-----GGATA---------------CTCGGGAG s panTro5.chr20 66428521 119 + 66533130 AGGTCACCGACTTTCTATA----TCT--------------GTTCTGTGGGC-------TGAGCTGGCAGGCAGGTCCATGCGCCAAAGAAAGGGAAG--GGGAG-----GGCTGT------------GGATGCAG---------------------------------CAGAAGATCC-TCCTG-----GGATA---------------CTCGGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103667 119 + 62195757 AGGTCACCAACTTTCTATA----TCT--------------GTTCTGTGGGC-------TGAGCTGGCAGGCAGGTCCATGTGCCAAAGAAAGGGAAG--GGGAG-----GGCTGT------------GGATGCAG---------------------------------CAGAAGATCC-TCCTG-----GGATA---------------CTCGGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492874 119 - 578057 AGGTCACTGACTTTCTATA----TCT--------------GTTCTGTGGGC-------TGAGCTGGCAGGCAGGTCCATGTGCCAAAGAAAGGGAAG--GGGAG-----GGCTGT------------GGATGCAG---------------------------------CAGAAGATCC-TCCTG-----GGATA---------------CTCAGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017037 119 - 110113093 AGGTCACCGACTTTCTATA----TCT--------------GTTCTGTGGGC-------TGAGCTGGCAGACAGGTCCATGCTCCAAAGAAAGGGAAG--GGAAG-----GGCTGT------------GAACGCAG---------------------------------CAGATGATCC-TCCTG-----GGATA---------------CTCGGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92742633 119 - 92844088 AGCTCACCGACTTTCTATA----CCT--------------GTTCTGTGGGC-------TGAGCTGGCGGGCAGGTCCATGCTCCAAAGAAAGGGAAG--GGAAG-----GGCCGT------------GGACGCAG---------------------------------CAGGTGATCC-TCCTG-----GGATA---------------CTCGGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410680 119 + 96509753 AGCTCACCGACTTTCTATA----CCT--------------GTTCTGTGGGC-------TGAGCTGGCGGGCAGGTCCATGCTCCAAAGAAAGGGAAG--GGAAG-----GGCCGT------------GGACGCAG---------------------------------CAGGTGATCC-TCCTG-----GGATA---------------CTCGGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881655 119 - 16982598 AGCTCACCGACTTTCTATA----CCT--------------GTTCTGTGGGC-------TGAGCTGGCGGGCAGGTCCATGCTCCAAAGAAAAGGAAG--GGAAG-----GGCCGT------------GGACGCAG---------------------------------CAGGTGATCC-TCCTG-----GGATA---------------CTCGGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683239 119 - 3785965 AGCTCACCGACTTTCTGTA----CCT--------------GTTCTGTGGGC-------TGAGCTGGCGGGCAGGTCCATGCTCCAAAGAAAGGGAAG--GGAAG-----GGCTGT------------GGACGCAG---------------------------------CAGGTGATCC-TCCTG-----GGATA---------------CTCGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67832 119 - 179258 AGCTCACCGACTTTCTGTA----CCT--------------GTTCCGTGGGC-------TGAGCTGGTGGGCAGGTCCATGCTCCAAAGAAAGGGAAG--AGAAG-----GGCTGT------------GGACGCAG---------------------------------CAGGTGATCC-TCCTG-----GGATA---------------CTCGGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553370 119 - 5823884 AGCTCACCGACTTTCTATA----CCT--------------GTTCTGTGGGC-------TGAGCTGGCGGGCAGGTCCATGCTCCAAAGAAAGGGAAG--GGAAG-----GGCTGT------------GGACGCAG---------------------------------CAGGTGTTCC-TCCTG-----GGATA---------------CTCAGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36214 73 + 372756 AGGTCACTGACTTTCTGTA----TCT--------------GTTCTGTGGGC-------TGAGCTGGCAGGCAGGT--------------------------------------------------------------------------------------------------GACCC-TCCCG-----GGATT---------------CTTGGGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273697 73 + 16356641 AGGTCACCGACTTCCTGTA----TCT--------------GTTCTGTGGGC-------TGAGCTGGCAGGCAGGT--------------------------------------------------------------------------------------------------GATCC-TCCCG-----GGATA---------------CTTGGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142684 73 + 1231380 AGGTCACCGACTTCCTTTG----TCT--------------GTGCTGTGGGC-------TGAGCTGGCAGGCACGC--------------------------------------------------------------------------------------------------GACCC-GCCCC-----GGATA---------------CTTGGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672744 73 + 11732439 AAGTCACCGACTTTCTATA----TCT--------------GTTCTGTGGGC-------TGAGCTGGCAGGCAGGT--------------------------------------------------------------------------------------------------GATCC-TCCTG-----GGATA---------------CTTGGGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22837819 140 + 22939663 AGGTAGCAGGCTTTCCACA----TCT--------------GCTCTGTGGGC-------TGCGCTGGGACGCAGGAGCATGTTTGAGAGAAGGGAAAG--GGGggctggacgccgt------------ggctcatg---------------------------------cctgtaatccaggctg-----agacaggaggatcacttgagttcaggag i otoGar3.GL873542 I 9 I 300 s mm10.chr2 181784973 120 + 182113224 AGGG----GAACTTTTGCA----TCC---------------TTCTGTGCCT------ATGAGCTTACATACA------------AAAGGAAGGGCAA--GCATT-----AATGGTAATCAGAAAATGGGATAGAG---------------------------------ACTCTGATAG-TCCTGATTGTAGTTT---------------TTATGGAG i mm10.chr2 C 0 I 2 s canFam3.chr24 47598651 174 + 47698779 AGGTAGTAGGACTTGTACA----TCTTTGAAGAAGAAGCTGCTCTGCAGGCTGACCCTTGATCCGGCATGCAGGTACGTGCTCAGAAGAACGGGAAGCCAGGAG-----GGTTGT------------GCAGGCAGGCAGCAGCCTATGGGTCTGGGGATGGGGGGCTCTGAAGGATTC-CATTG-----GAGTG---------------CTTGGTG- i canFam3.chr24 I 10 I 3 s dasNov3.JH569290 236126 71 - 397369 ACGTCTACATCCTTCAGTAGGAGCCT--------------GCTCGGAGGGC-------AGTGATGGCCGTGCGGC---TGCAGCCTGGGAGGGGG-------------------------------------------------------------------------------------------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I a score=480171.000000 s hg38.chr20_KI270870v1_alt 101988 60 + 183433 GGGAGCAACACAAATGCTTGAATGCTGCTCTTAGATCGTTGAGTGGGAGCTTGGATCTTC s panTro5.chr20 66428640 60 + 66533130 GGGAGCAACACAAATGCTTGAATGCTGCTCTTAGATCGTTGAGTGGGAGCTTGGATCTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103786 60 + 62195757 GGGAGCAACACAAATGCTTGAATGCTGCTCTTAGATCGTTGAGTGGGAGCTTGGATCTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 492993 60 - 578057 GGGAGCAACACAAATGCTTGAATGCTGCTCTTAGATCGTTGAGTGGGAGCTTGGATCTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017156 60 - 110113093 GGGAGCAACGCAAATGCTTGAATGCTGCTCTTAGATCGTTGAGTGGGAACGTGGATCTTC i nomLeu3.chr13 C 0 I 2 s rheMac8.chr10 92742752 59 - 92844088 GGGAGCAAGACAAATGCTTGAATGCTGCTCTTAGATTGTTGAGTGGGAACGTGG-TCTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410799 59 + 96509753 GGGAGCAAGACAAATGCTTGAATGCTGCTCTTAGATTGTTGAGTGGGAACGTGG-TCTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881774 59 - 16982598 GGGAGCAAGACAAATGCTTGAATGCTGCTCTTAGATTGTTGAGTGGGAACGTGG-TCTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683358 59 - 3785965 GGGAGCAAGACAAATGCTTGAATGTTGCTCTTAGATTGTTGAGTGGGAACGTGG-TCTTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 67951 59 - 179258 GGGAGCAAGACAAATGCTTGAATGCTGCTCTTAGATTGTTGAGTGGGAACGTGG-TCTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553489 59 - 5823884 GGGAGCAAGGCAAATGCTTGAATGCTGCTCTTAGATTGTTGAGTGGGAACGTGG-TCTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36287 60 + 372756 GGGAACGAGGCAGATGCTTAAATGCTGCTCTGAGATCGCTGAGTGGGAACGTGCACCTTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273770 60 + 16356641 GGGAGTGAGGCAAATGTTTGAAAGCTGCTCTGAGATTGCTGAGTGAGAATGTGCACCTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142757 59 + 1231380 GGGAGCGAAGCAAATGCTTGAATGCTGCTCTGAAATCGC-GAGTGGGAACGTGCACCTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672817 60 + 11732439 GGGAACGAGGCAAATGCTTGAATGCTGCTCTGAGATCGCTGAGTGGGAACGTGCACCTTC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181785095 55 + 182113224 GAAAGTAAGTCTGGTGCTTGAAGGTTGCTCATGAATC-CTAAGTGGA---GTGC-TCTTT i mm10.chr2 I 2 I 7 s canFam3.chr24 47598828 52 + 47698779 AGGAGCACGGAACTCACTTCAATGCTGTTCCTAAATCCTTCAGTGAA--------GCTTC i canFam3.chr24 I 3 I 16 s dasNov3.JH569290 236197 31 - 397369 --GAGTGCGGCA-------------TCCCACTGGAGTGTTGGGGGG-------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e otoGar3.GL873542 22837959 300 + 22939663 I a score=673968.000000 s hg38.chr20_KI270870v1_alt 102048 100 + 183433 CACAATACT--GTCTGCTGTAATGGCTTCACAGCAGTGACAGGGAAGTTGATGCTGCCCTCAGTACATAAATGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC s panTro5.chr20 66428700 100 + 66533130 CACAATCCT--GTCTGCTGTAATGGCTTCACAGCAGTGACAGGGAAGTTGATGCTGCCCTCAGTACATAAATGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103846 100 + 62195757 CACAATACT--GTCTGCTGTAATGGCTTCACAGCAGTGACAGGGAAGTTGATGCTGCCCTCAGTACATAAATGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493053 100 - 578057 CACAATACT--GTCTGCTGTAATGGCTTCACAGCAGTGACAGGGAAGTTGATGCTGCCCTCAGTACATAAATGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92742811 100 - 92844088 CACGATGCT--CTCTGCCCTAATGGCTTCACAGCAGTGACAGGGAAGTTGATGCTGCCCTCAGTACCTAAGTGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410858 100 + 96509753 CACGATGCT--CTCTGCCCTAATGGCTTCACAGCAGTGACAGGGAAGTTGATGCTGCCCTCAGTACCTAAGTGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881833 100 - 16982598 CACGATGCT--CTCTGCCCTAATGGCTTCACAGCAGTGACAGGGAAGTTGATGCTGCCCTCAGTACCTAAGTGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683417 100 - 3785965 CACGATGCT--CTCTGCCCTAATGGCTTCACAGCAGTGACAGGGAAGTTGATGCTGCCCTCAGTACCTAAGTGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68010 100 - 179258 CACGATGCT--CTCTGCCCTAATGGCTTCACAGCAGTGACAGGGGAGTTGACGCTGCCCTCAGTACCTAAGTGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553548 100 - 5823884 CACAATGCT--GTCTACTGTAATGGCTTCACAGCAGTGACAGGGAAGTTGATGCTGCCCTCAGTACATAAGTGAG------------------------AGAAGAAAAC------AGGCCAGACCATGGCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36347 99 + 372756 CTCAATACT--GTCTGCTGTGATGGCTTCCCAATGGTGACAGGGAAGTTGGTGCTG-CCTCAGTACATAAGTGAG------------------------AGAAGAAAAC------AGGTCAGAAGATGGCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273830 100 + 16356641 CACAGTACT--GTCTGCTGCAAGGGCTTCCCAGTGGTGACAGGGAAGTTGGCGCTGCCCTCAGTACATGAGTGAC------------------------AGAAGAAAAC------AGGTCAGAAGATGGCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142816 100 + 1231380 CACAATACT--GTCTGCTGTAATGGCTTCCCAGTGGTGACAGGGAAGTTGGTGCTGCCCTCAGTACATAAGTTAG------------------------AGAAGAAAAC------AGGTCAGAAGATGGCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672877 96 + 11732439 CACAATACT--GTCTGCTGTAATGGCCTCCCAGTGGTGACGGGGAAGCTGGTGCTGCCCTCGGTACATAAGT--A------------------------AGAAGAAAAC------AGGTCAGAAGGTGGC-- i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181785157 114 + 182113224 CACAGTGGTAGATTTGGACTTGGGTCTGCACAG-------------GTTACTACTACTGTCAGAACACAAGACAGTTTGTAACCCTTTTGGCTGCCACAAGGAGAGCCCCCCCAAAAGACAAACCAT----- i mm10.chr2 I 7 C 0 s canFam3.chr24 47598896 85 + 47698779 CATGG------ATCTGCTGGAAGGGCTTCATGGTGGTGATGTGCGAGTTGG---------CTGTACACAAGCAAG------------------------AGAATGAAAC------AAGCCCAG--ATTGCTA i canFam3.chr24 I 16 C 0 s dasNov3.JH569290 236228 26 - 397369 ----------------------------------------------------------------------------------------------------CAAGGAAAG------TACCCAAGCCATGGTTC i dasNov3.JH569290 C 0 I 25 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e nomLeu3.chr13 110017216 2 - 110113093 I e otoGar3.GL873542 22837959 300 + 22939663 I a score=471544.000000 s hg38.chr20_KI270870v1_alt 102148 71 + 183433 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAAGTGAGACTGAATGTGGTGTGAGGTACTGCTG---GAGCCAGGC s panTro5.chr20 66428800 71 + 66533130 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAAGTGAGACTGAATGTGGTGTGAGGTACTGCTG---GAGCCAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62103946 71 + 62195757 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAAGTGAGACTGAATGTGGTGTGAGGTACTGCTG---GAGACAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493153 71 - 578057 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAAGTGAGACTGAATGTGGTGTGAGGTACTGCTG---GAGCCAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92742911 68 - 92844088 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAA--GTGACTGAATGT-GTGTGAGGCACTGTTG---GAGCCAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96410958 68 + 96509753 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAA--GTGACTGAATGT-GTGTGAGGCACTGTTG---GAGCCAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16881933 68 - 16982598 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAA--GTGACTGAATGT-GTGTGAGGCACTGTTG---GAGCCAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683517 70 - 3785965 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAATTGAGACTGAATGT-GTGTGAGGCACTGTTG---GAGCCGGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68110 70 - 179258 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAATTGAGACTGAATGT-GTGTGAGGCACTGTTG---GAGCCAGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553648 70 - 5823884 TGTCTTTCTCCCCTCCCCT-CACTGCAGAGAAGTGAGACTGAATGT-GTGTGAGGCACTGTTG---GAGCCAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36446 71 + 372756 TGTCCATCTCCCCTCCCCT-CACTGACGAGAAGTGAAACTGAATGTAGTGTGAGGCACTGCTG---GAGCCAGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16273930 71 + 16356641 TGTGCATCTCCCCTCCCCT-CACTGCCGAGAAGTGAAACTGAATGTGGTGTGAGGCACCGCTG---GAGCCAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142916 71 + 1231380 TGTCCATCTCCCCTCCCCT-CACTGCCGAGAAGTGAAGCCGAATGTGGTGTGAGGCACTGTTG---GAGCCGGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2672973 68 + 11732439 -GTCCATCTCCCCT-CCCT-CACTGCCGAGAAGTGAAGCTGAA-GTGGTGTGAGGCACCGTGG---GAGCCAGGC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181785271 51 + 182113224 TGTATTTATTTTTT-CTCT-CAATGGAGTGAA------------------TAAGATACTGCCAAGTGAACC---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47598981 62 + 47698779 CCCCTCCCCACTCTTCCCTCCCCTGGAGAAAGGGGACACTGGC---------AGATGCAGTTG---CAGCCAAT- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e dasNov3.JH569290 236254 25 - 397369 I e nomLeu3.chr13 110017216 2 - 110113093 I e otoGar3.GL873542 22837959 300 + 22939663 I a score=188119.000000 s hg38.chr20_KI270870v1_alt 102219 28 + 183433 AGGGTAGG--------GGACAGC-------CAGTTTCTG----------------------------------GCCA s panTro5.chr20 66428871 28 + 66533130 AGGGTAGG--------GGACAGC-------CAGTTTCTG----------------------------------GCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104017 28 + 62195757 AGGGTAGG--------GGACAGC-------CAGTTTCTG----------------------------------GCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493224 28 - 578057 AGGGTAGG--------GGACAGC-------CAGTTTCTG----------------------------------GCCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92742979 24 - 92844088 AGGGTGGG--------TGAT-----------AGTTTCTG----------------------------------GCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411026 28 + 96509753 AGGGTGGG--------TGATAGT-------CAGTTTCTG----------------------------------GCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882001 28 - 16982598 AGGGTGGG--------TGATAGT-------CAGTTTCTG----------------------------------GCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683587 28 - 3785965 AGGGTGGG--------TGATAGC-------CAGTTTCTG----------------------------------GCCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68180 28 - 179258 AGGGTGGG--------TGGTAGC-------CAGTTTCTG----------------------------------GCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553718 28 - 5823884 AGGGTGGG--------TGATAGC-------CAGTTTCTG----------------------------------GCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36517 28 + 372756 AGGGTGGG--------CAACGGC-------CAGCTTCTG----------------------------------GCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274001 28 + 16356641 AGGGTGGG--------CAACGGC-------CAGCTTCTG----------------------------------GCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1142987 28 + 1231380 AGGGTGGG--------CGATGGC-------CAGCTTCTG----------------------------------GCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673041 28 + 11732439 AGGGTGGG--------CGACGGC-------CAGCTTCTG----------------------------------GCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22838259 77 + 22939663 AGGGCAAGGCAGCACTTGAAGGCTGCTTTTTAGTTGCTGAGTGGAGCCCCTCCCCAGTCCCACCATCCACTGTGCTG i otoGar3.GL873542 I 300 C 0 s mm10.chr2 181785322 27 + 182113224 AGGGCAAG--------GGATGAC-------CAATTTTT-----------------------------------GCTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47599043 28 + 47698779 AGGGTGGG--------TGACTGC-------CAGGTCCCG----------------------------------GCCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e dasNov3.JH569290 236254 25 - 397369 I e nomLeu3.chr13 110017216 2 - 110113093 I a score=428476.000000 s hg38.chr20_KI270870v1_alt 102247 84 + 183433 CCTCCT---------------CACC-CCCCACTCTTC-----------------ACTG--GCCCCTTCCTTCTGGGAAGTGGCTGCCTATGGTCCGCTGGGACTCAGCAGGTGCTCTTC s panTro5.chr20 66428899 84 + 66533130 CCTCCT---------------CACC-CCCCAGTCTTC-----------------ATTG--GCCCCTTCCTTCTGGGAAGTGGCTGCCTATGGTCTGCTGGGACTCAGCAGGTGCTCTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104045 84 + 62195757 CCTCCT---------------CACC-CCCCAGTCTTC-----------------ATTG--GCCCCTTCCTTCTGGGAAGTGGCTGCCTATGGTCTGCTGGGACTCAGCAGGTGCTCTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493252 84 - 578057 CCTCCT---------------CACC-CTCCAGTCTTC-----------------ACTG--GCCCCTTCCTTCTGGGAAGTGGCTGCCTATGGCCTGCTGGGACTCAGCAGGTGCTCTTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92743003 78 - 92844088 CCTCCT---------------CGCC-CTGAAGTCTTC-----------------ATTG--GCCCCTTCCTCCCGGGAAAGGGCTGCCTATGGTCCCCTGGGACTCAGCAGATG------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411054 78 + 96509753 CCTCCT---------------CGCC-CTGAAGTCTTC-----------------ATTG--GCCCCTTCCTCCCGGGAAAGGGCTGCCTATGGTCCCCTGGGACTCAGCAGATG------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882029 78 - 16982598 CCTCCT---------------CGCC-CTGAAGTCTTC-----------------ATTG--GCCCCTTCCTCCTGGGAAAGGGCTGCCTATGGTCCCCTGGGACTCAGCAGATG------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683615 78 - 3785965 CGTCCT---------------CGCC-CCGAAGTCTTC-----------------ATTG--GCCCCTTCCTCCCGGGAGGGGGCTGCCTATGGTCCCCTGGGACTCAGCAGATG------ i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68208 78 - 179258 CCTCCT---------------CGCC-CCGAAGTCTTC-----------------ATTG--GCCCCTTCCTTCCGGGAAGGGGCTGCCTATGGTCCCCTGGGACTCAGCAGATG------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553746 78 - 5823884 CCTCCT---------------CACC-CCCAAATCTTC-----------------GTTG--GCCCCTTCCTCCTGAGAAGGGGCTGCCTGTGATCCCCTGGGACTCAGCAGGTG------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36545 68 + 372756 CCTCCT---------------CTCC-CCCAAG----------------------------------TCCTTCTGGGAAGGGGCTGCCTGTGGTCC-CTGGAGCTCAGCAGGTGCTCTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274029 68 + 16356641 CCTCCT---------------CTTC-CTCAGA----------------------------------TCCTTCTGGGAAGGGGCTGCCTGTGCTCC-CTGGGGCCCGGCAGGTGCTCTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143015 68 + 1231380 CTTCCT---------------CTCC-CCCAGG----------------------------------TCCTTCTGGGAAGGGGCTCCCTGTGGTCC-CTGGGGCTCAGCAGGTGCTCTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673069 68 + 11732439 CCTCCT---------------CTCC-CCCACG----------------------------------TCCTTCTGGGAAGGGACTGCCTGTGGTCC-CTGGGGCTCAGCAGGTGCTGTCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22838336 99 + 22939663 CTCCCT---------------CCCA-CACAAGTGTGCTGCTCCCAGGCCACACTGTGG--CTCTCTTTCTTCTGGACAGGGGCTACCTGTGGTCCCCTAGGG-TCAGTGGATGCTCCC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181785349 50 + 182113224 CATTTT---------------TACC-CCATAG-CTAC-----------------TTCA--GCTTTTTCCT-CTGTGCAGGGAAGACA-------------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47599071 100 + 47698779 CCTCCTGTTATGTTTCTCTGCCCTC-CTCACCCTTTC-----------------CATGTCACCCCTTCCTTCTAGGCAGCT-TTGTCTGTGGTCTCCTGAGGGTCAGTAGATGCCCCCT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 236279 82 - 397369 CCTTCT---------------CGCCTCCCATGTCTTC-----------------CCTG--GGTTCTTCCTCCTGGGCAGGGGCTGCCTGTGCTTC-CTGGGAGTCAGGCAGTGGTCC-- i dasNov3.JH569290 I 25 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e nomLeu3.chr13 110017216 2 - 110113093 I a score=961086.000000 s hg38.chr20_KI270870v1_alt 102331 146 + 183433 CTCTTCTTCTAGGTC-T-CTGGGAGGAAAACCATTATGCAAGAGGCTCAACCGTCCCACCGAGACACTATAACCTATGTAATTTTATGGATTTTTAAAGAATAGTTGTAAGTCCATTCTAATTCTCCAGATTTGCTGGCTGTCAGAAC-- s panTro5.chr20 66428983 146 + 66533130 CTCTTCTTCTAGGTC-T-CTGGGAGGAAAACCATTATGCAAGAGTCTCAACCGTCCCACCGAGACACTATAACCTATGTAATTTTAAGGATTTTTAAAGAATAGTTGTAAGTCCATCCTAATTCTCCAGATTTGCTGGCTGTCAGAAC-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104129 146 + 62195757 CTCTTCTTCTAGGTC-T-CTGGGAGGAAAACCATTATGCAAGAGTCTCAACCGTCCCACCGAGACACTATAACCTATGTAATTTTAAGGATTTTTAAAGAATAGTTGTAAGTCCATCCTAATTCTCCAGATTTGCTGGCTGTCAGAAC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493336 146 - 578057 CTCTTCTTCTAGGTC-T-CCGGGAGGAAAACCATTATGCAAGAGGCTCAACCGTCCCACCGAGACACTATAACCTATGTAATTTTATGGATTTTTAAAGAATAGTTGTAAGTCCATCCTAATTCTCCAGATTTGCTGGCTGTCAGAAC-- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92743081 135 - 92844088 -----------GGTC-T-CCGGGAGGAAAACCATTATGCAAGAGGCTCAACCGTCCCACCGAGACACTATAACCTTTGTAATTTTGTGGATTTTTAAAGAATAGTTGTCAGTCCATCCTAATTCTCCAGATTTTCTGGCTGTCAGAAC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411132 135 + 96509753 -----------GGTC-T-CCGGGAGGAAAACCATTATGCAAGAGGCCCAACCGTCCCACCGAGACACTATAACCTTTGTAATTTTGTGGATTTTTAAAGAATAGTTGTCAGTCCATCCTAATTCTCCAGATTTTCTGGCTGTCAGAAC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882107 135 - 16982598 -----------GGTC-T-CTGGGAGGAAAATCATTATGCAAGAGGCCCAACCGTCCCACCGAGACACTATAACCTTTGTAATTTTGTGGATTTTTAAAGAATAGTTGTCAGTCCATCCTAATTCTCCAGATTTCCTGGCTGTCAGAAC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683693 135 - 3785965 -----------GGTC-T-CCGGGAGGAAAACCATTATGCAAGAGGCCCAACCGTCCCACCGAGACACTATAACCTTTGCAATTTTATGGATTTTTAAAGAATAGTTGTCAGTCCATCCTAATTCTCCAGATTTTCTGGCTGTCAGAAC-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68286 135 - 179258 -----------GGTC-T-CTGGGAGGAAAACCATTATGCAAGAGGCCCAACCGTCCCACCGAGACACTATAACCTTTGCAATTTTATGGATTTTTAAAGAATAGTTGTCAGTCCATCCTAATTCTCCAGATTTTCTGGCTGTCAGAAC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553824 135 - 5823884 -----------GGTC-T-CTGGGAGGAAAACCATTATGCAAGAGGCCCAACCGTCCCACCGAGACACTATAACGTTTGTAATTTTATGGATTTTTAAAGAATAGTTGTAAGACCATCCTAATTCTCCAGATTTTCTGGCTGTCAGAAC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36613 144 + 372756 TTCTTCTTTTGGGTC-T-CTGGGAGGAATATCATCATGCAAGAGGCTCAAGCATCCCACCAGGACACCC-AACCTATGTAATTTTATGGATTTTT-AAGAATAGTTGTAAGACCATCCTAAATCTCCAGATTTGCTGGCTGTCAGAAC-- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1143083 145 + 1231380 CTCTTCTTTTGTGTC-T-CTGGGAGGAATACCTTCATGCAAGAGGCTCAAGCGTCCCGCCAGCACACCCTAACCTATGCAATTTTATGGATTTTT-AAGAATAGTTGTAAGTCCATCCTAAATCTCTAGATTTGCTGGCTGTCAGAGC-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673137 145 + 11732439 CTCTTCTTTTGGGTC-T-CTGGGAGGAACCCTGTCATGCAGGAGGCTCAAGCGTCCCACCAGGACACCCTAACCTATGGAATTTTATGGATTTTT-AAGAAGAGTTGTAAGTCCATCCTAAATCTCCAGATTTGCTGGCTGTCAGAAC-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22838435 95 + 22939663 ATCCCTTTCAAGATC-T-CTGGGAG---ACCTCTTTAGGAAGAGGCTCCATCCTCCCACAGGGATGCT--GACCTGTATAATCT--------------------------------------------GTTTTGCTCCCAGTT--AAC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181785399 137 + 182113224 -TCCTCCCCCAGGTC-T-CCAGAGGAAGTG----TGTACAAAAACCTTAGTC-TTCTGTTAGAACACGGTAATCTACATGATCCTATGGCTTT---AAAAACTGTTCTAAATCTATTCTAATATTTTAGCTTTTCTGGTTATTAGAGC-- i mm10.chr2 C 0 I 162 s canFam3.chr24 47599172 134 + 47698779 CTCTTTGTCTAGTTCTT-CCAGGAGGGAAAACACTGA-----------AACCCTTCCACGGGGACACTATAATCCATATAATCTTGTGGATTT--AAAAAATTGTGCTAAGTCCATTCTAATTTTCCAGCTTTGCTAGCTGTTGGAAC-- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 236361 116 - 397369 CTCTTCTTCTAGGTC-TACTCAGAGGAAAAGAGTCATTCCAGAAGCTCAAGC-CTCCACAGGGACACTG-GGCGCTGGCGGCTTCCAGGGCTT-------------------------------TCTAAGCTTCGTGGCTGTTGGAACAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e saiBol1.JH378156 16274097 0 + 16356641 C e nomLeu3.chr13 110017216 2 - 110113093 I a score=1217851.000000 s hg38.chr20_KI270870v1_alt 102477 171 + 183433 ACATTTTAAATAAAATAAAACACTACCGTGTCTCCTTCTCTGGCCCAGCGCTGGGGTGAATGGCCCCCGTGGTGTCAGAATGCCCGGAACCCCCCAGCTCAGCGTTCCCACA-TATGGCC-TCTCTGCAG--C-CCCTCTGACCACGGCTCTCCACACACCCCAGCCCCAGGGTTT s panTro5.chr20 66429129 171 + 66533130 ACATTTTAAATAAAATAAAACACTACCGTGTCTCCTTCTCTGGCCCAGGGCTGGGGTGAATGGCCCCCGTGGTGTCAGAATGCCCGGAACCCCCCAGCTCAGGGTTCCCACA-TATGGCC-TCTCTGCAG--C-CCCTCTGACCACGGCTCTCCACACACCCCAGCCCCAGGGTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104275 171 + 62195757 ACATTTTAAATAAAATAAAACACTACCGTGTCTCCTTCTCTGGCCCAGGGCTGGGGTGAATGGCCCCCGTGGTGTCAGAATGCCCGGAACCCCCCAGCTCAGGGTTCCCACA-TATGGCC-TCTCTGCAG--C-CCCTCTGACCACGGCTCTCCACACACCCCAGCCCCAGGGTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493482 170 - 578057 ACATTTTAAATAAAATAACACACTACCGTGTCTCCTTCTCTGGCCGAGGGCTGGGGTGAATGGCCCCCGTGGTGTCAGAATG-CCGGAACCCCCCAGCTCAGGGTTCCCACA-TATGGCC-TCTCTGCAG--C-CCCTCTGACCACGGCTCTCCACACACCCCAGCCCCAGGGTTT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92743216 169 - 92844088 ACATTTTAAAGAAAATGAAACACTGTCGTGTCTCCTGCTCTGGTCCAGGGCT-GGGTGAATGGCCCCTGTGGTGTCAGAACGCCCGGAACCCCCCAGCTCAGGGTTCCCACA-TATGGCC-TGTGTGCAG----CCCTCTGACCACGGCTCTCCACACACCCCAGCCCCAGGAGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411267 169 + 96509753 ACATTTTAAAGAAAATGAAACACTGTCGTGTCTCCTGCTCTGGTCCAGGGCT-GGGTGAATGGCCCCTGTGGTGTCAGAACGCCCGGAACCCCCCAGCTCAGGGTTCCCACA-TATGGCC-TGTGTGCAG----CCCTCTGACCACGGCTCTCCACACACCCCAGCCCCAGGAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882242 169 - 16982598 ACATTTTAAAGAAAATGAAACACTGTCGTGTCTCCTGCTCTGGTCCAGGGCT-GGGTGAATGGCCCCTGTGGTGTCAGAACGCCCGGAACCCCCCAGCTCAGGGTTCCCACA-TATGGCC-TGTGTGCAG----CCCTCTGACCACGGCTCTCCACACACCCCAGCCCCAGGAGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683828 169 - 3785965 ACATTTTAAAGAAAATGAAACACTGTCGTGTCTCCTGCTCTGGTCCAGGGCT-GGGTGAATGGCCCCTGTGGTGTCAGAACGCCCGGAACCCCCCAGCTCAGGGTTCCCACA-TATGGCC-TGTGTGCAG----CCCTCTGACCATGGCTCTCCACACACCCCAGCCCCAGGAGTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68421 169 - 179258 ACATTTTAAAGAAAATGAAACACTGTCGTGTCTCCTGCTCTGGTCCAGGGCC-GGGTGAATGGCCCCTGTGGTGTCAGAATGCCCGGAACCCCCCAGCTCAGGGTTCCCACA-TATGGCC-TGTGTGCAG----CCCTCTGACCACGGCTCTCCACACACCCCAGCCCCAGGAGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5553959 169 - 5823884 ACATTTTAAAGAAAATGAAACACTGTCGTGTCTCCTCCTCTGGTCCAGGGCT-GGGTGAATGGCCCCTGTGGTGTCAGAACGCCCGGAACCCCCCAGCTCAGGGTTCCCACA-TATGGCC-TATGTGCAG----CCGTCTGACCACGGCTCTCCACACACCCCGGCCCCAGGAGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36757 170 + 372756 ATATTTTAAATAAAATGAAACACTAATGTGTCTCCTCCTTTAGTCCAGAGCTGGGGTATATGGTCCCTGTTGTGTCAGAATGCCTGGAATCCCCCAGCTCAAGGCCCCCACA-TGTGGCC-T-TGTGTCG--C-CCCTCTGACCACGGCTCTCCATGTACCACAGCCCCAGGATTT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1143228 170 + 1231380 CAATTTTAAATAAAATGAAACACTAATGTGTCTCCTCCTCTAGCCCAGAGCTGGGGTAAATGGTCCCTGTGGTGTCAGAATGCCTGGAACCCCCCAACTCAAGGCCCCCACA-TTTGGCC-T-TGTGTGG--C-CCCTCTGACCATGGCTCTCGACGTTCCCCAGTCCCAGGATTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673282 169 + 11732439 ACATTTTAAATAAAATGAAACACTAATGTGTCTCCTCCTCTAGTCCAGAGCTGGGGTAAATGGTCCCTGTGGTGTCAGAATGCCTGGAA-CCCCCAGCTCAAGGCCCCCACA-TGTGGCC-T-TGTGTAG--C-CCCTCTGACCACGGCTCTCCACGTACCCCAGCCCCAGGATTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22838530 161 + 22939663 ACATGTTAAATAAAGTAAGACACTAATATGCCTCCCCTCCTAGCCCAGGGCTGAGGCTAGTGGCCCCT-CAGTATCAGGAACCCAATA--CCTCCAACTAGAGGCTCCCACA-TGCTGTC-CCTGTGCCATTC-CCCTCTGGCTGCTCCTCTACACCCACC-TAGTTC-------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181785698 156 + 182113224 ACATTTTAAGTAAAATAAAACACCAAAGTATCTCCT--TCCAATCCAGGGCTAGAATGAATGGCCC--ATGGTATCAAGAGGCCCAGAATTTCTAA--TCAAGACTC------TGCAGCTATCTGCTCAG--CTCTCTCTGATT-TATCCCTCCTC---CACCAGCACCAGCTT-- i mm10.chr2 I 162 C 0 s canFam3.chr24 47599306 146 + 47698779 ACATTCTACATAAAATGGAACCGTAACCTGTCTCCTCCTCCCGCCCCAGGTGGGGATGAGT-GCCCCCATGGCCTCAGGGGGTCTGGAACCCCC-----------------------GCC-TGCCTTCAG--G---CTCCGACTGCTCCTGCCCATATTCCCCGGTTCTAGGATCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 236477 160 - 397369 ACATTTTAAATGAAGTAAAACCTTAACCTGCCTCCTCCTCCCGCCCAGGACTGGGG--GGTGCCCTCCGAGGTCTCAGGAGGCCCAGA---CCCCTGCCCCTGGCTCCCATGCTCCAGGA-CCTGCTCAG--CCCCCTCTGATCACTCCTCGCTGTAT--------TCCAGGATTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e saiBol1.JH378156 16274097 0 + 16356641 C e nomLeu3.chr13 110017216 2 - 110113093 I a score=701858.000000 s hg38.chr20_KI270870v1_alt 102648 84 + 183433 CAGAGATGTTTCTGACTGTC-Cc--------------catttattcattcatccacctgtccatccacccatccTTAAATGACATGCACTAAGCAG----------------------CTG------- s panTro5.chr20 66429300 84 + 66533130 CAGAGATGTTTCTGACTGTC-Cc--------------catttattcattcatccacctgtccatccacccatccTTAAATGACATGCACTAAGCAG----------------------CTG------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104446 84 + 62195757 CTGAGATGTTTCTGACTGTC-Cc--------------catttattcattcatccacctgtccatccacccatccTTAAATGACATGCACTAAGCAG----------------------CTG------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493652 83 - 578057 CGGAGATGTTTCTGACTGTC-Cc--------------catttattcattcatccacctgtccatccacccatccTTAAATGAC-TGCACTAAGCAG----------------------CTG------- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92743385 84 - 92844088 CAGAGATGTTTCTGACTGTC-Cc--------------catttattcattcatccacctgtccatccacccatccTTAAATGACATGCACTAAGCAG----------------------CTC------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411436 84 + 96509753 CAGAGATGTTTCTGACTGTC-Cc--------------catttattcattcatccacctgtccatccacccatccTTAAATGACATGCACTAAGCAG----------------------CTC------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882411 84 - 16982598 CAGAGATGTTTCTGACTGTC-Cc--------------catttattcattcatccacctgtccatccacccatccTTAAATGACATGCACTAAGCAG----------------------CTC------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3683997 84 - 3785965 CAGAGATGTTTCTGACTGTC-CC--------------CATTTATTCATTCATCCACCTGCCCATCCACCCATCCTTAAATGACATGCACTAAGCAG----------------------TTC------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68590 84 - 179258 CAGAGATGTTTCTGACTGTC-Cc--------------catttattcattcatccacctgtccatccacccatccTTAAATGACATGCACTAAGCAG----------------------CTC------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554128 84 - 5823884 CAGAGATGTTTCTGACTGTC-CC--------------CATTTATTCAGTCATCCACCTGTCCATCCACCCATCCTTAAATGACATGCACTAAGCAG----------------------CTC------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 36927 84 + 372756 CAGAGATGTTTCTGCCTGTC-CC--------------CATTTATTCATCCATCCACCTGTGCATCCGCCCATCCTCACATGATATGCACTGAGCAG----------------------CTC------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274097 84 + 16356641 CAGAGATGTTTCTGCCTATC-Cc--------------catgtattcattcatccacctgtccatccacccatccttacatGATATGCACTGAGCAG----------------------CTC------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143398 72 + 1231380 CAGAGATGTTTCTGCCTGTC-CC--------------CATGTATTCATTCATCCA------------CCCATCCTTACATGATatgcactgagcag----------------------ctt------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673451 84 + 11732439 CAGAGACGTTTCTGCCTGTC-Cc--------------catttattcattcatccacctgtccatccacccatccttacatGATACACACTGAGCAG----------------------CTC------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22838691 77 + 22939663 CAGAGATGTTTCAAACCACC-CCACcattcattcattcattcattcattcTTCCACCTGTCCATCTACCCATTCTCTC-------------------------------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181785854 83 + 182113224 CTAAGATAGTTTTGACTG-C-CC--------------CACATACTCACTCATTCTTTTCTCCATCTGCTGTGCTTTGCTTGATGTGTCCTGAATAG----------------------CTC------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47599452 99 + 47698779 CAGAGACATTCCCAACTCTTGGC--------------CATTTGTCTATTTGTCTGCCTGT--------CGGCCCTTACATAATATGTGCCGAGCAGGGAATGAAGCCATGGCACCTCACTC------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 236637 71 - 397369 CAGAGACAT------------CC-----------------------ATTCATCTGTCCGTCCTTCTGGCGGTTCGTAAATCGTGTGTACTGAGCAC----------------------GTCCGTGTTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56855737 337 + 57149010 I e nomLeu3.chr13 110017216 2 - 110113093 I a score=631319.000000 s hg38.chr20_KI270870v1_alt 102732 63 + 183433 TCTGGAGGAG-----AGACAATGACCTTACAACCATGAATGAATGAG--------CTCATTT--------CAGATTGAGATGAG s panTro5.chr20 66429384 63 + 66533130 TCTGGAGGAG-----AGACAATGACCTTACAACCATGAATGAATGAG--------CTCATTT--------CAGATTGAGATGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104530 63 + 62195757 TCTGGAGGAG-----AGACAATGACCTTACAACCATGAATGAATGAG--------CTCATTT--------CAGATTGAGATGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493735 63 - 578057 TCTGGAGGAG-----AGACAATGACCTTACCACCATGAATGAATGAG--------CTCATTT--------CAGACTGAGATGAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92743469 63 - 92844088 TCTGGAGGAG-----AGACAATGACCTTACAACCATGAATGAATGAG--------CTCATTT--------CAGATTGAGATGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411520 63 + 96509753 TCTGGAGGAG-----AGACAATGACCTTACAACCATGAATGAACGAG--------CTCATTT--------CAGATTGAGATGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882495 63 - 16982598 TCTGGAGGAG-----AGACAATGACCTTACAACCATGAATGAACGAG--------CTCATTT--------CAGATTGAGATGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684081 63 - 3785965 TCTGGAGGAG-----AGACGATGAGCTTACAACCATGAATGAACGAG--------CTCATTT--------CAGATTGAGATGAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68674 63 - 179258 TCTGGAGGAG-----AGACGATGAGCTTACAACCGTGAATGAACGAG--------CTCATTT--------CAGATTGAGATGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554212 63 - 5823884 TCTGGAGGAG-----AGACAGTGACCTTACAACCATGAATGAATGAG--------CTCATTT--------CAGATTGAGATGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37011 63 + 372756 TCTGGAGGAG-----AGACAGTGACCTTAACACCATGAATGCAGGAG--------CTCATTT--------CAGACTGAGAAGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274181 63 + 16356641 TCTGGAGGAG-----AGACAGTGACCTTAACACCGTGAATGCAGGAG--------CTCATTT--------CAGACTGAGAATAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143470 63 + 1231380 tctgggggag-----agtcactgaccttaacaccgtgaatgcaggag--------ctcattt--------cagactgagaagag i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673535 63 + 11732439 TCTGGAGGAG-----AGACAGTGACCTTAACACTATGAATGCAGGAG--------CTCATTT--------CAGAGTGAGAAGAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56856074 63 + 57149010 TCTGTAGGAG-----AGTCAGTGGCCTTACAACCGTGAATAAATGAG--------CTCATTT--------CATATTGAGATGAG i micMur3.chr18 I 337 I 251 s otoGar3.GL873542 22838768 60 + 22939663 --TGTGCAAG-----A-CCAGTGGTCTTGCAGCCATGAATAATTGAG--------CTCATTT--------CAGATTAATGTGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181785937 68 + 182113224 TCTGCAAGAGGCAGCAGTGAATGACCTCACATTTGTGAAGGTGGGAG--------CTCTCCT--------CAGCACAAGATGGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47599551 63 + 47698779 TCTGTAGGAG-----AGGAAATGACCTTGAAAACACGAGTGAGTGAG--------CTTATTT--------CAGAGCAAGATGAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 236708 76 - 397369 TCCCGGGGA------ACGTAGTGCCCTGTC--CTCTTAATGCAGGAGAGGGAACAATGATCTGGCTGGCCCAGATCCAGGCAAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e nomLeu3.chr13 110017216 2 - 110113093 I a score=1454439.000000 s hg38.chr20_KI270870v1_alt 102795 201 + 183433 GACTGTGAGGGAAACAAACAGGCACAAGGTGGAGACTGAGAGGAGCTGGGA------AGA--GGCAGGGTGCTG-----------GCC------------------ACCTAAGAATGCTCCCAGCT--C----------------TACCT-----CT-GGAGTGCCTCCCACCCCA--------------GATGTCCTCAGG---TCACTGATCCATTCACCCTC-CCC------ATCCCTA-CCTGGCTCTCAACCCTTAGCAGAGCTCTCTGTTTCTTGAACTCT s panTro5.chr20 66429447 201 + 66533130 GACTGTGAGGGAAACAAACAGGCACAAGGTGGAGACTCAGAGGAGCTGGGA------AGA--GGCAGGGTGCTG-----------GCC------------------ACCTAAGAATGCTCCCAGCT--C----------------TACCT-----CT-GGAGTGCCTCCCACCCCA--------------GATGTCCTCAGG---TCACTGATTCATTCACCCTC-CCC------ATCCCTA-CCTGGCTCTCAACCCTTAGCAGAGCTCTCTGTTTCCTGAACTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104593 201 + 62195757 GACTGTGAGGGAAACAAACAGGCACAAGGTGGAGACTCAGAGGAGCTGGGA------AGA--GGCAGGGTGCTG-----------GCC------------------ACCTAAGAATGCTCCCAGCT--C----------------TACCT-----CT-GGAGTGCCTCCCACCCCA--------------GATGTCCTCAGG---TCACTGATTCATTCACCCTC-CCC------ATCCCTA-CCTGGCTCTCAACCCTTAGCAGAGCTCTCTGTTTCCTGAACTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493798 201 - 578057 GACTGTGAGGGAAACAAACAGGCACAAGGTGGAGACTGAGAGGAGCTGGGA------AGA--GGCAGGGTGCTG-----------ACC------------------ACCTAAGAATGCTCCCAGCT--C----------------TACCT-----CT-GGAGTGCCTCCCACCCCA--------------GATGTCCTCAGG---TCACTGATCCATTCACCCTC-CCC------ATCCCTA-CCTGGCTCTCAACCCTCAGCAGAGCTCTCTGTTTCTTGAACTCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92743532 200 - 92844088 GACTGTGAGGGAAACAAACAGGCACAGGGTGGAGATTGAGAGGAGGTGGGA------AGA--GGCAGGGTGTTG-----------GCC------------------ACCCAAGAAAGCTCCCGGCT--C----------------TACCT-----CT-GGAGTGCCCCCCA-CCCA--------------AATGTCCGCAGG---TCACCGATCCATCCACCCTC-CCC------ATCCCTA-CCTGGCTGTCAAGCCTTAGCAGAGCTCCCTGTTTCTTGAGCTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411583 200 + 96509753 GACTGTGAGGGAAACAAACAGGCACAGGGTGGAGACTGAGAGGAGGTGGGA------AGA--GGCAGGGTGTTG-----------GCC------------------ACCCAAGAAAGCTCCCGGCT--C----------------TACCT-----CT-GGAGTGCCCCCCA-CCCA--------------AATGTCCGCAGG---TCACCGATCCATCCACCCTC-CCC------ATCCCTA-CCTGGCTCTCAAGCCTTAGCAGAGCTCCCTGTTTCTTGAGCTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882558 200 - 16982598 GACTGTGAGGGAAACAAACAGGCACAGGGTGGAGACTGAGAGGAGGTGGGA------AGA--GGCAGGGTGTTG-----------GCC------------------ACCCAAGAAAGCTCCCGGCT--C----------------TACCT-----CT-GGAGTGCCCCCCA-CCCA--------------AATGTCCGCAGG---TCACTGATCCATCCACCCTC-CCC------ATCCCTA-CCTGGCTCTCAAGCCTTAGCAGAGCTCCCTGTTTCTTGAGCTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684144 201 - 3785965 GACTGTGAGGGAAACAAACAGGCACAGGGTGGAGACTGAGAGGAGGTGGGA------AGA--GGCAGGGTGTTG-----------GCC------------------ACCCAAGAAAGCTCCCGGCT--C----------------TACCT-----CT-GGAGTGCCTCCCACCCCA--------------AATGTCCGCAGG---TCACTGATCCATCCACCCTC-CCC------ATCCCTA-CCTGGCTCTCAAGCCTTAGCAGAGCTCCCTGTTTCTTGAGCTCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68737 201 - 179258 GACTGTGAGGGAAACAAACAGGCACAGGGTGGAGACTGAGAGGAGGTGGGA------AGA--GGCAGGGTGTTG-----------GCC------------------ACCCAAGAAAGCTCCCGGCT--C----------------TACCT-----CT-GGAGTGCCTCCCACCCCA--------------AATGTCCGCAGG---TCACTGATCCATCCACCCTC-CCC------ATCCCTA-CCTGGCTCTCAAGCCTTAGCAGAGCTCCCTGTTTCTTGAGCTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554275 200 - 5823884 GACTGTGAAGGAAACAAACAGGCACAGGGTGGAGACTGAGAGGAGGTGGGA------AGA--GGCAGGGTG-TG-----------GCC------------------ACCCAAGAAAGCTCCCGGCT--C----------------TACCT-----CT-GGAGTGCCTCCCACCCCA--------------AATGTCTGCAGG---TCACTGATCCATTCACCCTC-CCC------ATCCCTA-CCTGGCTCTCAAGCCTTAGCAGAGCTCCCTGTTTCTTGAGCTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37074 197 + 372756 GACTGCGGGGGAAGCAAGCAGGCACATGGTGGGGACTTTGA-GAGGT-GGA------GGA--GGCAGGGTGCTG-----------GCC------------------ACGCACGAATGCACCCAGCT--C----------------CACGT-----CT-GGAGTGTCTCCCACTGCA--------------CATGTCTTCGGA---TCACTGCTCCTTTCACCCTT-CCT------ATCCCTA-CCTGGCTCTCAAGCCTTAGC--AGCTCCCTCTGCCTCGGGCTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274244 197 + 16356641 GACTGCGAGGGAAACAAGCAGGCACAGGGTGGGGACTTCGA-GAGGT-GGA------AGA--GGCAGGGTGCTG-----------GCC------------------ACCCACGAATGTTCCCAACT--C----------------CACCT-----CT-GGAGTGTCTCCCACCCCA--------------GATGTCTTCAGG---TCACTGCTCCATTCACCCTC-CCT------ATCCCTA-CCTGGCTCTCAAGCCTTAGC--AGCTCCCTCTGCCTTGGGCTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143533 184 + 1231380 gactgcgaggGAAACAAGCAGGCACAGGGTGGGGACCTCGAGGAGGT-GGA------AGA--GGCAGGGTGCTG-----------GCC------------------ACCCATGAATGCTCCCAGGC--C----------------CACCT-----CT-GGAGTGTCTCCCACCCCA--------------GATGTCTTCGGG---TCA--------------CTC-CCT------ATCCCTA-CCTGGCTCTCAAGCCTTAGC--AGCTCCCTCTGCCTTGGGCTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673598 203 + 11732439 GGCTGCGAGGGGAACAAGCAGGCACAGGGTGGGGACTTTGAGGAGGT-GGA------AGA--GGCAGGGTGCTG-----------GCC------------------ACCCACCAGTGCTCCCAGCT--C----------------CACCT-----CT-GGAGTGTCTCCCACCCCA--------------GATGTCTTCGGG---TCACTGCTCCATTCACCCTC-CCTATCCCCATCCCCA-CCTGGCTCTCAAGCCTCAGC--AGCTCCCTCTG-CTTGGGCTCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22838828 148 + 22939663 GACCCTGAGGGA---GAAGAGGTAGAGAGCAGA----TAAGTGAGTGGGAA------AGA--GGT--GGTGCTG------------CC------------------ACCCAGGGATGCTCCCAGC---C----------------CATCT---------GAGTTTCTCCCTCC-----------------------------------------TGCACATCCTC-CCT------ACCTCCA-CTTGGCCCTCAAGCCTCAGC--AGCTCCCTC------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181786005 237 + 182113224 GACCTTTCAGGAAATGAACTGGTTAGGAACAAATAAAGAGATGTGGTCAGA------GGAATGGCAGAGGTCTG-----------ACCATTGAGTTTGATTTGTCTATCCAAAGGTACTCTTGGCT--CCTGGG----GATAACTTACCTCAATGCT-GAGGTGTCTCTCG---TG--------------GATACTCTTAGGTATTCACTTGTCAGATCACTGTT-CCT------ATCCCTAGTCAGGGTTTCAGG--GTCGCAGGGATCTGAGGTTATTTATCTTT i mm10.chr2 C 0 I 7 s canFam3.chr24 47599614 225 + 47698779 GACCATGAGGGGAATGAGCAGGCACAGAACAGAGA-----GGGTGGGAAAA------GGA--GGCACAGGCCTGACTTTTGAGAGGCC------------------ACCCAGGTGTGTTTCCTGCTTCC----------------CAGGA-----CT-GGAGCATCTCTTACCCCAAGGCCACCCTCCCTAAGACCCTCGGGTCATCACTGCTTCACTGAGCCTCATCC------CTCCCAC-CCAGGCTCCCAAGTCTGAGC--AGCCCCCTCCACCCTGAGCTCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 236784 195 - 397369 GGCCAGGAAGGAGACAAGCAG----AGGAAGGCGAAAGAGAGGTGGCTGAGGGGCCTGGA--GGGAAGGCACAG------------CC------------------GCCTGAGGGTGCTCCCAGCT--CCCCGGGTCTGGACGCTCCCAT-----CTGGGAATGTCTTC---CTGA--------------AACATCTTCAGG---TCGTCG-------------C-CCC------AT------CCAGGCCCCCGAGCCTTAG---AAGCCCCTGCCACCTGTGTGCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1850014 1396 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56856137 251 + 57149010 I e nomLeu3.chr13 110017216 2 - 110113093 I a score=74777.000000 s hg38.chr20_KI270870v1_alt 102996 12 + 183433 CCCC-----TGAGCACT s panTro5.chr20 66429648 12 + 66533130 CCCC-----TGAGCACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104794 12 + 62195757 CCCC-----TGAGCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 493999 12 - 578057 CCCC-----TGAGCACT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92743732 11 - 92844088 CCCC------GAGCACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411783 11 + 96509753 CCCC------GAGCACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882758 11 - 16982598 CCCC------GAGCACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684345 11 - 3785965 CCCC------GAGCACT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68938 11 - 179258 CCCC------GAGCACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554475 11 - 5823884 CCCC------GAGCACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37271 12 + 372756 CCCC-----TCACCACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274441 12 + 16356641 CCCC-----TCAACACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143717 12 + 1231380 CCCC-----TCAACGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673801 12 + 11732439 CCCC-----TCAACACT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1851410 12 - 2029793 CCCC-----TGAGCACC i proCoq1.NW_012150197v1 I 1396 C 0 s otoGar3.GL873542 22838976 12 + 22939663 ACCC-----TGAGCATC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181786249 12 + 182113224 CTCC-----TGAACAGC i mm10.chr2 I 7 I 2 s canFam3.chr24 47599839 15 + 47698779 TTCCTGGAGTGAGGA-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 236979 12 - 397369 CCCC-----TGCCCGCC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56856137 251 + 57149010 I e nomLeu3.chr13 110017216 2 - 110113093 I a score=48209.000000 s hg38.chr20_KI270870v1_alt 103008 3 + 183433 CCC s panTro5.chr20 66429660 3 + 66533130 CCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104806 3 + 62195757 CCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494011 3 - 578057 CCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017218 3 - 110113093 CCC i nomLeu3.chr13 I 2 C 0 s rheMac8.chr10 92743743 3 - 92844088 CCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411794 3 + 96509753 CCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882769 3 - 16982598 CCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684356 3 - 3785965 CCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68949 3 - 179258 CCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554486 3 - 5823884 CCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37283 3 + 372756 CCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274453 3 + 16356641 CCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143729 3 + 1231380 CCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673813 3 + 11732439 CCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1851422 3 - 2029793 CCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22838988 3 + 22939663 CCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181786263 3 + 182113224 CAT i mm10.chr2 I 2 C 0 s canFam3.chr24 47599854 3 + 47698779 CCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 236991 3 - 397369 CCC i dasNov3.JH569290 C 0 I 530 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56856137 251 + 57149010 I a score=465029.000000 s hg38.chr20_KI270870v1_alt 103011 75 + 183433 TGCCTCCCTGGGGTGATGTACAAATCTT-GGAATGCC-AGGCTGG-------TGCCCCTCAGGGCCAGAACAGCTCCTGCTG--------------------GG s panTro5.chr20 66429663 75 + 66533130 TGCCTCCCTGGGGTGATGTACAAATCTT-GGAATGCC-AGGCTGG-------TGCCCCTCAGGGCCAGGACACCTCCTGCTG--------------------GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104809 75 + 62195757 TGCCTCCCTGGGGTGATGTACAAATCTT-GGAATGCC-AGGCTGG-------TGCCCCTCAGGGCCAGGACACCTCCTGCTG--------------------GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494014 95 - 578057 TGCCTCCCTGGGGTGATGTACAAACCTT-GGAATGCC-AGGCTGG-------TGCCCCTCAGGGCCAGGACACCTCCTGCTGGGGCCAGGACACCTCCTGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017221 54 - 110113093 TGCCTCCCTGGGGTGATGTACAAACCTT-GGGATGCC-AGGCTGG-------TGCCCCTCA-----------------------------------------GG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92743746 54 - 92844088 TGCCACCCTGGAGTGATGTACAGACCTT-GGGATGCC-AGGCTGG-------TGCCCCTCA-----------------------------------------GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411797 54 + 96509753 TGCCACCCTGGAGTGATGTACAGACCTT-GGGATGCC-AGGCTGG-------TGCCCCTCA-----------------------------------------GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882772 54 - 16982598 TGCCACCCTGGAGTGATGTACAGACCTT-GGGATGCC-AGGCTGG-------TGCCCCTCA-----------------------------------------GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684359 54 - 3785965 TGCCACCCTGGAGTGATGTACAAACCTT-GGGATGCC-AGGCTGG-------TGCCCCTCA-----------------------------------------GG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 68952 54 - 179258 TGCCACCCTGGAGTGATGTACAAACCTT-GGGATGCC-AGGCTGG-------TGCCCCTCA-----------------------------------------GG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554489 54 - 5823884 TGCCACCCTGGAGTGATGTACAAACCTT-GGGACGCC-AGGCTGG-------TGCCCCTCA-----------------------------------------GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37286 54 + 372756 TGCCTCCTTGGAGTGACATACAAACCTT-GGGGTGCC-AGGCTCA-------TGCCCCTCA-----------------------------------------AG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274456 54 + 16356641 TGCCTCCTTGGAGTGACATGCAAACCTT-GGGGTGCC-AGGCTGA-------TGCCCCTCA-----------------------------------------GG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143732 54 + 1231380 TGCCTCCTCGGAGTGATGTACAAACCTT-GGGGTGCC-AGGCTGG-------TGCCCCTCA-----------------------------------------GG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673816 54 + 11732439 TGCCTCCTTGGAGTGACGTACAAACCTT-GGGGTGCC-AGGCTGG-------TGCCCCTCA-----------------------------------------GG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1851425 75 - 2029793 TGCCTTCCTGCAGTGATGTGCAAACCTTGGGGATGCCGAGGCTGG-------TGCC--CCAGGGCCAGGACTCCTCCTGCTG--------------------GG i proCoq1.NW_012150197v1 C 0 I 228 s otoGar3.GL873542 22838991 73 + 22939663 TACCTCCCTGGAGTGATGCATAAACCTTGGGGATGCCAAGGCTGG-------TGCC-TCCAGGGCAAGGA---CACCTAATA--------------------GG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181786266 42 + 182113224 TGCCTTTCTAGAATGATGTGAAAAACTC-CCAAGGCC-ATGTCA------------------------------------------------------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47599857 36 + 47698779 TACC-------------------ACCTG-GGGCTG---AGGCTGGCTCTCACTCCTCCT--------------------------------------------- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56856137 251 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I a score=99720.000000 s hg38.chr20_KI270870v1_alt 103086 10 + 183433 GCCAGGACAC s panTro5.chr20 66429738 10 + 66533130 GCCAGGACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104884 10 + 62195757 GCCAGGACAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494109 10 - 578057 GCCAGGACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017275 10 - 110113093 GCCAGGACAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92743800 10 - 92844088 GCCAGGACAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411851 10 + 96509753 GCCAGGACAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882826 10 - 16982598 GCCAGGACAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684413 10 - 3785965 GCCAGGACAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69006 10 - 179258 GCCAGGACAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554543 10 - 5823884 GCCAGGACAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37340 10 + 372756 GCCAGGACAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274510 10 + 16356641 GCCAGGACAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143786 10 + 1231380 GCCAGGACAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673870 10 + 11732439 GCCAGGACAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22839064 1 + 22939663 -----G---- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47599893 9 + 47698779 GCCAGGACA- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1851500 228 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786308 0 + 182113224 C e micMur3.chr18 56856137 251 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I a score=560655.000000 s hg38.chr20_KI270870v1_alt 103096 53 + 183433 CCTCCTGCTGGGGCCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACTGGCCCTGG s panTro5.chr20 66429748 53 + 66533130 CCTCCTGCTGGGGCCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACTGGGCCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104894 53 + 62195757 CCTCCTGCTGGGGCCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACTGGGCCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494119 53 - 578057 CCTCCTGCTGGGGCCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACTGGCCCCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017285 53 - 110113093 CGTCCTGCTGGGGCCAG------------GCTTCAGCCGGGATTCTGTCCTTTGACCCGCCCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92743810 53 - 92844088 CCTCCTGCTGGGGCCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACCGGCCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411861 53 + 96509753 CCTCCTGCTGGGGCCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACCGGCCCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882836 53 - 16982598 CCTCCTGCTGGGGCCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACCGGCCCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684423 53 - 3785965 CCTCCTGCTGGGGCCAT------------GCTTCAGCCAGGATTCTGTCCTTTGACCGGCCCTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69016 53 - 179258 CCTCCTGCTGGGGCCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACCGGCCCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554553 53 - 5823884 CCTCCTGCTGGGGCCAG------------TCTTCAGCCAGGATTCTGTCCTTTGACCGGCCCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37350 42 + 372756 CCTCATGCCAGGA-----------------------CCAGGATTCTGTCCTTTGAGCAGCCCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274520 53 + 16356641 CATCCTGCCAGGACCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACCAGCCCCGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143796 53 + 1231380 CCTCCTGCCGGGACCAG------------GCTTCAGTCAGGATTCTGTCCTTTGACCAGCCCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673880 53 + 11732439 CCTCCTGCCGGGACCAG------------GCTTCAGCCAGGATTCTGTCCTTTGACCAGCCCTGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56856388 53 + 57149010 CCTCCTACTGGGGCCAG------------GCTTCAGTCTGGATTCTGCCCTGCGGCTGGCTCTGG i micMur3.chr18 I 251 C 0 s otoGar3.GL873542 22839065 35 + 22939663 ------------------------------TTTCCTTCTGGATTCTGTCCTTGGGGTTGCCCTTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181786308 53 + 182113224 CCTCCATTTGGGGTCAA------------GTTTCAGCACAGATTCTGCCCTTGGATAATCCTTGG i mm10.chr2 C 0 I 225 s canFam3.chr24 47599902 62 + 47698779 ---CCTGCAGGGACTGGGGAGGCAGGACAGCCTCAGCATGAGTTCTGTTCTTTGTCCCACCCTTA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1851500 228 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 236994 530 - 397369 I a score=57810.000000 s hg38.chr20_KI270870v1_alt 103149 5 + 183433 GCCAT s panTro5.chr20 66429801 5 + 66533130 GCCAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104947 5 + 62195757 GCCAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494172 5 - 578057 GCCAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017338 5 - 110113093 GCCGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92743863 5 - 92844088 GCCAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411914 5 + 96509753 GCCAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882889 5 - 16982598 GCCAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684476 5 - 3785965 GCCAT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69069 5 - 179258 GCCAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554606 5 - 5823884 GCCAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37392 5 + 372756 GCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274573 5 + 16356641 GTCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143849 5 + 1231380 GCCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673933 5 + 11732439 GCCAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56856441 5 + 57149010 GCCAT i micMur3.chr18 C 0 I 209 s otoGar3.GL873542 22839100 5 + 22939663 GCCAT i otoGar3.GL873542 C 0 I 5 s canFam3.chr24 47599964 5 + 47698779 GCCGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1851500 228 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786361 225 + 182113224 I e dasNov3.JH569290 236994 530 - 397369 I a score=1025826.000000 s hg38.chr20_KI270870v1_alt 103154 116 + 183433 -----TGGTGCAGAAGGGATGTGATGGGG---GTTGAGGGAGGAAGCTGTTCAGCTCTGAGGGCCCTGTCCTGGGAGGAAGCATGAAAAAGGAATgaaagaggcagagagagacagagagggag s panTro5.chr20 66429806 116 + 66533130 -----TGGTGCAGAAGGGATGTGATGGGG---GTTGAGGGAGGAAGCTGTTCAGCTCTGAGGGCCCTGTCCTGGGAGGAAGCATGAAAAAGGAATgaaagaggcagagagagacagagagggag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62104952 116 + 62195757 -----TGGTGCAGAAGGGATGTGATGGGG---GTTGAGGGAGGAAGCTGTTCAGCTCTGAGGGCCCTGTCCTGGGAGGAAGCATGAAAAAGGAATgaaagaggcagagagagacagagagggag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494177 116 - 578057 -----TGGTGCAGAAGGGATGTGGTGGGG---GTTGAGGGAGGAAGCTGTTCAGCTCTGAGGGCCCTGTCCTGGGAGGAAGCATGAAAAAGGAATgaaagaggcagagagagacagacagggag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017343 116 - 110113093 -----TGGTGCAGAAGGGATGTGATGGGG---GTTGAGGGAGGAAGCTGTTCAGCTCTGAGGGCCCTGGCCTGGGAGGAAGCATGAAAAAGGAATgaaagaggcagagagagacagagagggag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92743868 115 - 92844088 -----TGGTGCAGAAGGGATGTTGTGGGG---GTTGAGGGAGGGAGCTGTTCAGCTCTCAGGG-CCTGGCCTGGGGAGAAGCATGGAAAAGGAATgaaagaggcagagagagacagagagagag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96411919 115 + 96509753 -----TGGTGCAGAAGGGATGTTGTGGGG---GTTGAGGGAGGGAGCTGTTCAGCTCTCAGGG-CCTGGCCTGGGGAGAAGCATGGAAAAGGAATgaaagaggcagagagagacagagagagag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16882894 115 - 16982598 -----TGGTGCAGAAGGGATGTTGTGGGG---GTTGAGGGAGGGAGCTGTTCAGCTCTCAGGG-CCTGGCCTGGGGAGAAGCATGGAAAAGGAATgaaagaggcagagagagacagagagagag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684481 115 - 3785965 -----TGGTGCAGAAGGGATGTTGTGGGG---GTTGAGGGAGGGAGCTGTTCAGCTCTCAGGG-CCTGGCCTGGGGAGAAGCATGGAAAAGGAATgaaagaggcagagagagacagagagagag i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69074 115 - 179258 -----TGGTGCAGAAGGGATGTTGTGGGG---GTTGAGGGAGGGAGCTGTTCAGCTCTCAGGG-CCTGGCCTGGGGAGAAGCATGGAAAAGGAATgaaagaggcagagagagacagagagagag i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554611 115 - 5823884 -----TGGTGCAGAAGGGATGTGATGGGG---GTTGAGGGAGGGAGCTGTTCAGCTCTCAGGG-CCTGGCCTGGGGAGAAGCATGAAAAAGGGATgaaagaggcagagagagacagagagagag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37397 97 + 372756 -----TGGTACAGAAGGGATGTGATGGGG---GCTGAGGGAGGGGGCTGTTCAGCTTT-------------------GAAGCATGAGAAAGGAACGACAGGGGCAGAGAGAGACAGAGAGGGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274578 111 + 16356641 -----TGGTACAGAAGGGTTGTGATGGGT---GCTGAGGGAGGGGGCTGTTCAGCTTTGAGGA-C----CCTGGGAGGAAGCATgagagagaaaggaaaggggcagagagagacagagagggag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143854 111 + 1231380 -----TGGTACAGAAGGGTTGTGATGGGG---GCTGAGGGAGGGGGCTGTTCAGCTTTGAGGA-C----CCTGGGAGGAAGCACGAGAAAGGAGTGGAAGGGGCAGAGAGGGACagagagggag i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2673938 110 + 11732439 -----TGGTACAGAAGGGATGTGATGGGG---GCTGAGGGA-GGGGCTGTTCAGCTTTGAGGA-C----CCTGGGAGGAAGCACGAGAAAGGAATGAAAGGGGCagagagagacagagagggag i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22839110 108 + 22939663 -----CAGAAAGGAAGGGGTGTGTTGTGA---GTTGGAGGGGGGAGCTCTTCAGCCCTGAAGG------CCCTGGAGAAAGCAGGAAAAAAGAGTGAAAGAGG--GAGAGAGACAGagagacag i otoGar3.GL873542 I 5 I 132 s canFam3.chr24 47599969 117 + 47698779 CCTTGTAAAAGAGCAGGGATGTGGCACAGCATGGAGAGGAGGGAAGCTCTTGGGCTGGAAG---C----CCTGGGAAGAGCCAagaagaaaggagagagtggggagggagagggagaatgtgag i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1851500 228 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786361 225 + 182113224 I e micMur3.chr18 56856446 209 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I a score=184027.000000 s hg38.chr20_KI270870v1_alt 103270 29 + 183433 tccgtgagtgagtgaggagaAATGGGTAA---------------------- s panTro5.chr20 66429922 29 + 66533130 tccgtgagtgagtgaggagaCGTGGGTAA---------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105068 29 + 62195757 tccgtgagtgagtgaggagaAGTGGGTAA---------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494293 29 - 578057 tcagtgaatgagtgaggagaAATGGGTGT---------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017459 29 - 110113093 tcagtgagtgagcgaggagaAATGGGTGT---------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92743983 29 - 92844088 tgaatgagtgagcgaggagaAATGGGTGT---------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412034 29 + 96509753 tgaatgagtgagcgaggagaAATGGGTGT---------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883009 29 - 16982598 tgaatgagtgagcgaggagaAATGGGTGT---------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684596 29 - 3785965 tgaatgagtgagcgaggagaAATGGGTGT---------------------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69189 29 - 179258 tgaatgagtgagcgaggagaAATGGGTGT---------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554726 29 - 5823884 tgaatgagtgagcgaggagaAATGGGTGT---------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37494 29 + 372756 TGAGTGACTGAGCAAGGAGAAACAGGCAT---------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274689 29 + 16356641 tgagtgaCTGAGCAAGGAAAAACGGGCGT---------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143965 28 + 1231380 tgagtgactgagcgaggagAAATGGGCG----------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674048 28 + 11732439 tgagtgactgagcaaggagaAACA-GCGT---------------------- i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47600086 51 + 47698779 taagagagagaagggggggaggaggACCCCTCCAGAGACCGCGAAGGATGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1851500 228 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786361 225 + 182113224 I e micMur3.chr18 56856446 209 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=188878.000000 s hg38.chr20_KI270870v1_alt 103299 19 + 183433 CCCTGAGCTGGGGCCCGGG s panTro5.chr20 66429951 19 + 66533130 CCCTGAGCTGGGGCCCGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105097 19 + 62195757 CCCTGAGCTGGGGCCCGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494322 19 - 578057 CCCTGAGCTGGGGCCTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017488 19 - 110113093 CCCTGACCTGGGGCCCGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744012 19 - 92844088 CCCTGAGCTGGGGCCCAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412063 19 + 96509753 CCCTGAGCTGGGGCCCAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883038 19 - 16982598 CCCTGAGCTGGGGCCCAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684625 19 - 3785965 CCCTGAGCTGGGGCCCGGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69218 19 - 179258 CCCTGAGCTGGGGCCTGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554755 19 - 5823884 CCCTGAGCTGGGGCCCGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37523 18 + 372756 CCCTGAGCT-GGGCCAGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274718 19 + 16356641 CCCTGAGCTGGGGCCAGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1143993 19 + 1231380 CCCCGAGCTGGGGCCAGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674076 19 + 11732439 CCCTGAGCTGGGGCCAGGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1851728 19 - 2029793 CCCTGAGCTTGGGCTGGGG i proCoq1.NW_012150197v1 I 228 I 1 s canFam3.chr24 47600137 19 + 47698779 CCCTGAACTTGGGGAGGGT i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786361 225 + 182113224 I e micMur3.chr18 56856446 209 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=1196676.000000 s hg38.chr20_KI270870v1_alt 103318 114 + 183433 AAGGAGT-----GGGGAGACGCAGCCTCTGGGGGCAAAGGTGGAAGTTGGCACAAAGCCCGTTGGGCTTCA------------TGGAAAATCTCCAACCCTGATATCTTTGGAAGCTGA--GTCTACCATTTC s panTro5.chr20 66429970 114 + 66533130 AAGGAGT-----GGGGAGACGCAGCCTCTGGGGACAAAGGTGGAAGTTGGCACAAAGCCCGTTGGGCTTCA------------TGGAAAATCTCCAACCCTGATATCTTTGGAAGCTGA--GTCTACCATTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105116 114 + 62195757 AAGGAGT-----GGGGAGACGCAGCCTCTGGGGACAAAGGTGGAAGTTGGCACAAAGCCCGTTGGGCTTCA------------TGGAAAATCTCCAACCCTGATATCTTTGGAAGCTGA--GTCTACCATTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494341 114 - 578057 AAGGAGT-----GGGGAGACGCAGCTTCTGGGGGCAAAGGTGGAAGTTGGCACAAAGCCCGTTGGGCTTCA------------TGGAAAATCTCCAACCCTGATATCTTTGGAAGCTGA--GTCTACCATTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017507 113 - 110113093 AAGGAGT-----GGGGAGACACAGCCTCTGGGGACAAAGGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCA------------TGGAAAATCTCCAACCCTGACATCTTTGGAAGTTGA--GTCT-CCCTTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744031 113 - 92844088 ATGGAGC------GGGAGGCACAGCCTCTGGGGGCAAATGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCA------------TGGAAAATATCCAACCCTGACATCTTTGGAAGCTGA--GTCTACCACTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412082 113 + 96509753 ATGGAGC------GGGAGGCACAGCCTCTGGGGGCAAATGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCA------------TGGAAAATATCCAACCCTGACATCTTTGGAAGCTGA--GTCTACCACTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883057 113 - 16982598 ATGGAGC------GGGAGGCACAGCCTCTGGGGGCAAATGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCA------------TGGAAAATATCCAACCCTGACATCTTTGGAAGCTGA--GTCTACCACTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684644 113 - 3785965 ATGGAGC------GGGAGACACAGCCTCTGGGGGTAAATGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCA------------TGGAAAATATCCAACCCTGACATCTTTGGAGGCTGA--GTCTACCACTTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69237 113 - 179258 ATGGAGC------GGGAGACACAACCTCTGGGGGTAAATGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCA------------TGGAAAATATCCAACCCTGACATCTTTGGAGGCTGA--GTCTACCACTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554774 114 - 5823884 ATGGAGC-----GGGGAGACACAGCCTCTGGGGGCAAATGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCG------------TGGAAAATATCCAACCCTGACATCTTTGGAAGCTGA--GTCTACCACTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37541 112 + 372756 AA-CGGC-----GGGAAGTCACAGCTTCT-GGGGCAAGGGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCA------------TGGAAAATCCCTAGCCCTGACATCTCTGGCAGTTGA--GTCCACCATTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274737 114 + 16356641 AAGGGGT-----GGGCAGTCACAGCCTCTGGGGGCAAGGGTGGAAGTTGGCACAAGGCCTGTTGGGCTTCA------------TGGAAAATCCCTAGCCCTGATGTCTTTGGCAGTTGA--GTCCACTCTTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144012 115 + 1231380 AAGGGGT-----GGGCAGTCACAGCCTCTGGGGGCGAGGGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCA-----------GTGGAAAATCCCTAGCCCTGACATCTTTGGCAGTTGA--GTCCACCATTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674095 113 + 11732439 AAGGGGT-----GGGCAGTCACAGCCTCT-GGGGCGAGAGTGGAAGTTGGCACAAAGCCTGTTGGGCTTCA------------TGGAAAATCCCTAGCCCTGACATCTTTGGTGGTTGA--GTCCACCATTTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56856655 114 + 57149010 AAGGGGT-----GGGCAGACACGGCCTCTGGGGGCAAAGGTGAAAGTTGGCACAAACCCTGCTGGGCTTCA------------TGGAAAGTCTCTAACCCTGACATTTTTGGAAGTTGA--GTCCACCGTTTC i micMur3.chr18 I 209 C 0 s proCoq1.NW_012150197v1 1851748 114 - 2029793 GAGGGGT-----GGGCAGACGTGGCCTCTGGGGGCAAAGGTGAAAGTTGGCACGAAGCCTGCTGGGCTTCA------------TGGAAAGTCTCTAACCCTGACATTTTTGGAAGTTGA--GTCCACTGTTTC i proCoq1.NW_012150197v1 I 1 C 0 s canFam3.chr24 47600156 133 + 47698779 GGGGGGTGCAGGGGGCAGACCTGGCCTCTGAGGGTAAAGGCGAAGCTTGGCACAAAGTCTGCTGGGCCTCGTTGCTCACCTCGTGAAAAATCTGTGACTGGACATTCAATGGACACTGAGGGCCTACGCTCTC i canFam3.chr24 C 0 I 10 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786361 225 + 182113224 I e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=27200.000000 s hg38.chr20_KI270870v1_alt 103432 2 + 183433 CC s panTro5.chr20 66430084 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105230 2 + 62195757 CC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494455 2 - 578057 CC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017620 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744144 2 - 92844088 CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412195 2 + 96509753 CC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883170 2 - 16982598 CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684757 2 - 3785965 CC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69350 2 - 179258 CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554888 2 - 5823884 CC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37653 2 + 372756 CC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274851 2 + 16356641 CC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144127 2 + 1231380 CC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674208 2 + 11732439 CC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56856769 2 + 57149010 CC i micMur3.chr18 C 0 I 192 s proCoq1.NW_012150197v1 1851862 2 - 2029793 CC i proCoq1.NW_012150197v1 C 0 C 0 e canFam3.chr24 47600289 10 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786361 225 + 182113224 I e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=12000.000000 s hg38.chr20_KI270870v1_alt 103434 1 + 183433 C s panTro5.chr20 66430086 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105232 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494457 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017622 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744146 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412197 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883172 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684759 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69352 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554890 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37655 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274853 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144129 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674210 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1851864 1 - 2029793 C i proCoq1.NW_012150197v1 C 0 I 125 e canFam3.chr24 47600289 10 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786361 225 + 182113224 I e micMur3.chr18 56856771 192 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=647023.000000 s hg38.chr20_KI270870v1_alt 103435 88 + 183433 TTAGAGGTTAGACACGAGTGGTTTGTTACTGGCTATGTGTCTGGGttcttttc-----attttttattttttttgagacggagtcttgctctg s panTro5.chr20 66430087 88 + 66533130 TTAGAGGTTAGACACGAGTGGTTTGTTACTGGCTATGTGTCTGGGttcttttc-----attttttattttttttgagacggagtcttgctctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105233 88 + 62195757 TTAGAGGTTAGACACGAGTGGTTTGTTACTGGCTATGTGTCTGGGttcttttc-----attttttattttttttgagacggagtcttgctctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494458 88 - 578057 TTAGAGGTTAGACATGAGTGGTTTGTTACTGGCTATGTGTCTGGGttcttttc-----atttttaattttttttgagacggagtcttgctctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017623 88 - 110113093 TTAGAGGTTAGACATGAGTGGTTTGCTACTGGCTATGTTTCTGGGttcttttc-----attttttagtttttttgagatggagtcttgctctg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744147 88 - 92844088 TTAGAGGTTAGACATGAGTGGTTTGTTACTGGCTGTGTTTCTGGGttcttttc-----attttttattttttttgagatggagtcttgctctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412198 88 + 96509753 TTAGAGGTTAGACATGAGTGGTTtgttactggctctgtttctgggttcttttc-----attttttattttttttgagacggagtcttgctctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883173 88 - 16982598 TTAGAGGTTAGACATGAGTGGTTtgttactggctctgtttctgggttcttttc-----attttttattttttttgagacggagtcttgctctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684760 88 - 3785965 TTAGAGGTTAGACATGAGGGGTTtgttactggctctgtttctgggttcttttc-----attttttattttttttgagacggagtcttgctctg i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69353 88 - 179258 TTAGAGGTTAGACATGGGGGGTTtgttactggctctgtttctgggttcttttc-----attttttattttttttgagacggagtcttgctctg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554891 93 - 5823884 TTAGAGGTTAGACATGAGTGGTTTGTTATTGGCTATGTTTCTGGGTtcttttcttttttttttttttttttttttagacggagtcttgctctg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37656 82 + 372756 TTAGAGATGAGACCTGAGTCGTTTGCTTCTGGCTATGtttctggttgtttttc---------ttgttgttttttgagac--aatcttgctcca i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274854 84 + 16356641 TTAGAGATTAGACCTGAGTGGTTTGCTTCTGGCTATGtttctggttctttttc---------taattattttttgagacagaatcttgcttca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144130 82 + 1231380 TTAGAGATTAGAC--GAGCGGTTTGCTTCTGGCTATGtttctggttctttttc---------ttattattttttgagacagaatcttgctcca i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674211 84 + 11732439 TTAGAGATTAGACATGAGTGGTTTGCTTCTGGCTATGtttctggttctttctc---------ttattattttttgagacagaatcttgctcca i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1851865 125 - 2029793 I e canFam3.chr24 47600289 10 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786361 225 + 182113224 I e micMur3.chr18 56856771 192 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=1178827.000000 s hg38.chr20_KI270870v1_alt 103523 159 + 183433 tcacccaggctggagtgcagtggcgtgttctcagctcacctcaacctttgcctcgggggttcaggtgattctcctgcctcagcctcccaggtagctgggactacaggcggccgccaccacacccggctaatttttgtatttttagtagagtcaggtttc s panTro5.chr20 66430175 159 + 66533130 tcacccaggctggagtgcagtggcgtgatctcagctcacctcaaccttcgcctcgggggttcaggcgattctcctgcctcagcctcccaggtagctgggactacaggtggccgccaccacacccggctaatttttgtatttttagtagagtcaggtttc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105321 159 + 62195757 tcacccaggctggagtgcagtggcgtgatctcagctcacctcaaccttcgcctcgggggttcaggcgattctcctgcctcagcctcccaggtagctgggactacaggtggccgccaccacacccggctaatttttgtatttttagtagagtcaggtttc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494546 159 - 578057 tcacccaggctggagtgcagtggcgtgatctcagctcacctcaaccttcgcctcgcgggttcaggcgattctcctgcctcagcctcccaggtagctgggactacaggtggccgccaccacacctggctaatttttgtatttttagtagagtcaggtttc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017711 159 - 110113093 tcacccaggctggagtgcagtggtgcaatctcagctcacctcaaccttcgcctcgcgagttcaggcgattctcctgcctcagcctcccagatagctgggactacaggtggccaccaccacacctggctaatttttgtatttttagtagagttaggtttc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744235 159 - 92844088 tcacccaggctggagtgcagtggtgcaatctcggcttacctcaacatttgcctcgtgggttcaggcaattctcctgcctcagcctcccaggtagctgggattacaggtggctgccaccatacctggctaatttttgtatttttagtacagtcaggtttc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412286 159 + 96509753 tcacccaggctggagtgcagtggtgcaatctcggcttacctcaacatttgcctcgtgggttcaggcaattctcctgcctcagcctcccaggtagctgggattacaggtggctgccaccatacctggctaatttttgtatttttagtacagtcaggtttc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883261 159 - 16982598 tcacccaggctggagtgcagtggtgcaatctcggcttacctcaacctttgcctcgtgggttcaggcaattctcctgcctcagcctcccaggtagctgggattacaggtggctgccaccatacctggctaatttttgtatttttagtacagtcaggtttc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3684848 159 - 3785965 tcgcccaggctggagtgcagtggtgcaatctcggcttacctcaacctttgcctcacgggttcaggcaattctcctgcctcagcctcccaggtagctgggattacaggtggctgccaccatacctggctaatttttgtatttttagtacagtcagggttc i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69441 159 - 179258 tcacccaggctggagtgcagtggtgcaatctcggcttaccacaacctttgcctcacgggttcaggcaattctcctgcctcagcctcccaggtagctgggattacaggtggctgccaccatacctggctaatttttgtatttttagtacagtgaggtttc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5554984 159 - 5823884 tcactcaggctggagtgcagtggtgcaatctcggcttacctcaacctttgcctcacgggttcaggcgattctcctgcctcagcctcccaggtagctgggactacaggcggctgccaccgcacctggctaatttttgtatttttagtacagtcaggtttc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37738 157 + 372756 --gcccaggctggagtgcagcggcgcaatctcggctcaccgaggtcttcgcctcttgggttcaagtgattctcctgcctcagcctcttgagtagctgggactacaggtggctgccaccacacccagctaattgttgtatttttagtagagtcgggtttc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16274938 155 + 16356641 --gcccaggctggagtgcagtggtgcaatctcggctcaccgcaatcttggcctcctgggttcaagtgattctcctgcctcagcctctcgagtagctgggactacaggtggctgccaccacacccagctagttgttgtatttttagt--agtcaggtttc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144212 157 + 1231380 --gcccaggctggagtgcagtggcgcaatctcgggtcaccacaatcttcgcctcctgggttcaagtgattctcctgcctcagcctctcgagtagctgggactacaggtggctgccaccacgcccagctaattgttgtatttttagtagagtcgggtttc i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1851865 125 - 2029793 I e canFam3.chr24 47600289 10 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786361 225 + 182113224 I e micMur3.chr18 56856771 192 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I e aotNan1.NW_018500483v1 2674295 0 + 11732439 C e otoGar3.GL873542 22839218 132 + 22939663 I a score=476890.000000 s hg38.chr20_KI270870v1_alt 103682 56 + 183433 accatgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgc s panTro5.chr20 66430334 56 + 66533130 accatgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105480 56 + 62195757 accatgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494705 56 - 578057 accatgcctgccttggcctcccaaagtgctgggattacaggcgtgagccaccacgc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017870 56 - 110113093 accatgcctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744394 56 - 92844088 accatgcctgcctcgacctcccgacgtgctgggattacaggcgtgagccaccacgc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412445 56 + 96509753 accatgcctgcctcgacctcccgacgtgctgggattacaggcgtgagccaccacgc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883420 56 - 16982598 accatgcctgcctcgacctcccgacgtgctgggattacaggcgtgagccaccacgc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685007 56 - 3785965 accatgcctgcctcggcctcccgacgtgctgggattacaggcgtgagccaccacgc i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69600 56 - 179258 accatgcctgcctcggcctcccgacgtgctgggattacaggcgtgagccaccacgc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555143 56 - 5823884 accatgcctgcctcggcctcccgaagtgctgggattacaggcgtgagccaccacgc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37895 56 + 372756 accatgcctgcctcagcctcccaaactgttgggattacaggtgtaagccaccgcac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275093 56 + 16356641 accatgcctgcctcggcctccccaactgttgggattacaggcgtgagccaccacac i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144369 56 + 1231380 accatgcctgccttggcctcccaaagtgttgggattacaggtgtgagccaccacac i cebCap1.NW_016107870v1 C 0 C 0 s mm10.chr2 181786586 55 + 182113224 actctgcttgcctctcccttgcca-gtgctgggattaaaggtgtatgccaccatgc i mm10.chr2 I 225 C 0 e proCoq1.NW_012150197v1 1851865 125 - 2029793 I e canFam3.chr24 47600289 10 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56856771 192 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I e aotNan1.NW_018500483v1 2674295 0 + 11732439 C e otoGar3.GL873542 22839218 132 + 22939663 I a score=636425.000000 s hg38.chr20_KI270870v1_alt 103738 94 + 183433 ccggccC---TGTTTCT-------------------------------------GGGTTCTGAGTGGATTTGTTACAGCTGCAGCCT-----CAGCGCAGATCCCTCT--AGGTTTCAAGATTGC----TTACTGCATTGGC------------------TTG s panTro5.chr20 66430390 94 + 66533130 ccggccC---TGTTTCT-------------------------------------GGGTTCTGAGTGGATTTGTTACAGCTGCAGCCT-----CAGCGCAGATCCTTCT--AGGTTTCAAGACTGC----TTACTGCATTGGC------------------TTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105536 94 + 62195757 ccggccC---TGTTTCT-------------------------------------GGGTTCTGAGTGGATTTGTTACAGCTGCAGCCT-----CAGCGCAGATCCCTCT--AGGTTTCAAGACTGC----TTACTGCATTGGC------------------TTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494761 94 - 578057 ccggccC---TGTTTCT-------------------------------------GGGTTCTGAGTGGATTTGTTACAGCTGCAGCCT-----CAGCTCAGATCCCTCT--AGGTTTCAAGACTGC----TTACTGCATTGGC------------------TTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110017926 96 - 110113093 ccagccC---TGTTTCT-------------------------------------GGGTTCTGAGTGTATTTGTCACAGCTGCAGCCT-----GAGTCCAGATTCCTCTGCAGGTTTCAAGACTGC----TTACTGCATTGGC------------------TTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744450 98 - 92844088 ccagccC---TGTTTCT-------------------------------------GGGCTCTGAGTGTATTTGTCACAGCTGCAGCCTA---AGAGTCCAGATTCCTCTGCAGGTTTCAAGACTGC----TAACTGCATTTGC------------------TTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412501 98 + 96509753 ccagccC---TGTTTCT-------------------------------------GGGCTCTGAGTGTATTTGTCACAGCTGCAGCCTA---AGAGTCCAGATTCCTCTGCAGGTTTCAAGACTGC----TAACTGCATTTGC------------------TTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883476 98 - 16982598 ccagccC---TGTTTCT-------------------------------------GGGCTCTGAGTGTATTTGTCACAGCTGCAGCCTA---AGAGTCCAGATTCCTCTGCAGGTTTCAAGACTGC----TAACTGCATTTGC------------------TTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685063 98 - 3785965 ccagccC---TGTTTCT-------------------------------------GGGCTCTGAGTGTATTTGTCACAGCTGCAGCCTA---AGAGTCCAGATTCCTCTGCAGGTTTCAAGACTGC----TAACTGCATTTGC------------------TTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69656 98 - 179258 ccagccC---TGTTTCT-------------------------------------GGGCTCTGAGTGTATTTGTCACAGCTGCAGCCTA---AGAGTCCAGATTCCGCTGCAGGTTTCAAGACTGC----TAACTGCATTTGC------------------TTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555199 98 - 5823884 ccagccC---TGTTTCT-------------------------------------GGCCTCTGAGTGTATTTGTCACAGCTGCAGCCTA---AGAGTCCAGATTCCTCTGCAGGTTTCAAGACTGC----TAACTGCATTTGC------------------TTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 37951 100 + 372756 ccagccC---TTTTTCT-------------------------------------GGGCTCTGAGTGCATTTCTCACAGCTTCAGCCTC---AGAGTCCAGATTGCTCTGCAGGCTTCTGGACTGC----TTATTGCATTTGC----------------TTTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275149 116 + 16356641 ccagGCC---TGTTTCA-------------------------------------GGGTTCTGAGTGCATTTCTCACAATTTCAGCCTC---AGAGTCCAGATTGCTCTGCAGGTTTCCGGACTGC----TTACTGCATTTGCttttttttttttttttttttt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144425 99 + 1231380 ccagccC---TGTTTCT-------------------------------------GGGTTCTGAGTGCGTTTCTCACAACTTCAGCCTC---TGAGTCCAGATTGCTCTGCAGGTTTCCGGACTGC----TTACTGCATTTGC-----------------TTTT i cebCap1.NW_016107870v1 C 0 C 0 s mm10.chr2 181786641 136 + 182113224 ctggcCCCATCGTTTCTTTTTAAAGACCAGCTATTTATTGTTTTGGCTGTATTGAGTTTCTGAGTTTATTTCTCAGA----CAACCAAAATAGAGCCAAAAGTAATCTTCAGGTTTTGAGGCTTC----TTGTTGTATTTGA------------------TA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47600299 89 + 47698779 CCGGCTC---TGTGTCT-------------------------------------GGGTTCCG------------ACAATCACAGCCCA---AGAGTCCGGACAAATCTATGGGTTTCGAGGCAGCATAATGACTGCATTTGC------------------TT- i canFam3.chr24 I 10 C 0 e proCoq1.NW_012150197v1 1851865 125 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56856771 192 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I e aotNan1.NW_018500483v1 2674295 0 + 11732439 C e otoGar3.GL873542 22839218 132 + 22939663 I a score=675890.000000 s hg38.chr20_KI270870v1_alt 103832 69 + 183433 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGTTTTGGCCAGGCCAGCATGCAGATGA s panTro5.chr20 66430484 69 + 66533130 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGTTTTGGCCAGGCCAGCATGCAGATGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105630 69 + 62195757 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGTTTTGGCCAGGCCAGCATGCAGATGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494855 69 - 578057 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGTTTTGGCCAGGCCAGCATGCAGATGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018022 69 - 110113093 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGGCTTGGCAAGGCCAGCACGCAGATGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744548 69 - 92844088 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGTTTTAGCAAGGCCAGCATGCAGATGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412599 69 + 96509753 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGTTTTAGCAAGGCCAGCATGCAGATGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883574 69 - 16982598 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGTTTTAGCAAGGCCAGCATGCAGATGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685161 69 - 3785965 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGTTTTAGCAAGGCCAGCATGCAGATGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69754 69 - 179258 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCACTCTGTTTTAGCAAGACCAGCATGCAGATGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555297 69 - 5823884 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGCATTCTGTTTTAGCAAGGCCAGCATGCAGATGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38051 69 + 372756 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGAACTCTGTTTTGCCAAGGGCCGTGTGCAGATGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275265 69 + 16356641 ttttGGTTCCTGAGTTTGTAAACACCCAACTCAGGGAACTCTGATTTGCCAAGGGCAGCATGCAGATGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144524 69 + 1231380 TTTTGGTTCCTGAGTTTGTAAACACCCAACTCAGGGAACTCTGTTTTGCCAAGGGCATCATGCAGATGA i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1851990 69 - 2029793 TTTTGGTCCCCAAGTTCGTAAACGCCCAACTCAGGGAACTCAGTTTTGGCGAGGGTAACACGCACACAG i proCoq1.NW_012150197v1 I 125 C 0 s mm10.chr2 181786777 55 + 182113224 TTTTGGTTCTTGACTTTGTAAAGGTTTGACACAGGGAGCTCAGTTTG--------------GCAAGTGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47600388 68 + 47698779 TGTTGGT-CCCAAGTTTGTGAATGTCCAACTTAGGAGACTCCGTTTTGGCAAGGGTGCTGTGCAGATGG i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56856771 192 + 57149010 I e dasNov3.JH569290 236994 530 - 397369 I e aotNan1.NW_018500483v1 2674295 0 + 11732439 C e otoGar3.GL873542 22839218 132 + 22939663 I a score=316417.000000 s hg38.chr20_KI270870v1_alt 103901 25 + 183433 GTCTGGAAAAGGGGCTGGTCTTCGT s panTro5.chr20 66430553 25 + 66533130 GTCTGGAAAAGGGGCTGGTCTTCGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105699 25 + 62195757 GTCTGGAAAAGGGGCTGGTCTTCGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494924 25 - 578057 GTCTGGAAAAGGGGCCGGTCTTCGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018091 25 - 110113093 GTCTGGAAAAGGGGCTGGTCTTCGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744617 25 - 92844088 GTCTGGAAAAGGGGCTGGTCTTCGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412668 25 + 96509753 GTCTGGAAAAGGGGCTGGTCTTCGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883643 25 - 16982598 GTCTGGAAAAGGGGCTGGTCTTCGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685230 25 - 3785965 GTCTGGAAAAGGGGCTGGTCTTCGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69823 25 - 179258 GTCTGGAAAAGGGGCTGGTCTTCGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555366 25 - 5823884 GTCTGGAAAAGGGGCTGGTCTTCGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38120 25 + 372756 GTCTGGAAAAGGGGCTGGTCTTCGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275334 25 + 16356641 GTCTGGAAAAGGGGCTGGTCTTCGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144593 25 + 1231380 GTCTGGAAAAGGGGCTGGTCTTCGT i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56856963 25 + 57149010 GTCTGGAAAAGGGGCTGGTCTTTGT i micMur3.chr18 I 192 C 0 s proCoq1.NW_012150197v1 1852059 25 - 2029793 GTCTGGAAAAGGGGCTGGTCTTTGT i proCoq1.NW_012150197v1 C 0 C 0 s mm10.chr2 181786832 24 + 182113224 GTAT-GAAAAGGGTCTAGTAATTGT i mm10.chr2 C 0 I 4 s canFam3.chr24 47600456 24 + 47698779 GTCT-GAAACGGGGCTGGTCTCTGC i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 236994 530 - 397369 I e aotNan1.NW_018500483v1 2674295 0 + 11732439 C e otoGar3.GL873542 22839218 132 + 22939663 I a score=123717.000000 s hg38.chr20_KI270870v1_alt 103926 14 + 183433 ACCATGTCATGGTG s panTro5.chr20 66430578 14 + 66533130 ACCATGTCATGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105724 14 + 62195757 ACCATGTCATGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494949 14 - 578057 AGCATGTCATGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018116 14 - 110113093 AGCATGTCATGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744642 14 - 92844088 CGCACGTCACGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412693 14 + 96509753 CGCACGTCACGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883668 14 - 16982598 CGCACGTCACGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685255 14 - 3785965 CGCACGTCACGGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69848 14 - 179258 CGCACGTCACGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555391 14 - 5823884 AGCACGTCATGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38145 14 + 372756 AGCATGTCATGGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275359 14 + 16356641 AGCATGTCATGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144618 14 + 1231380 AGCATGTCATGGTG i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56856988 14 + 57149010 AGCCTGTCCTGGTG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1852084 14 - 2029793 GGCCTGTCATGGTG i proCoq1.NW_012150197v1 C 0 I 7 s canFam3.chr24 47600480 14 + 47698779 AGCCTGACGCGGTA i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786856 4 + 182113224 I e dasNov3.JH569290 236994 530 - 397369 I e aotNan1.NW_018500483v1 2674295 0 + 11732439 C e otoGar3.GL873542 22839218 132 + 22939663 I a score=37970.000000 s hg38.chr20_KI270870v1_alt 103940 7 + 183433 AGAACtg s panTro5.chr20 66430592 7 + 66533130 AGAACtg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105738 7 + 62195757 AGAACtg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494963 7 - 578057 AGAACTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018130 7 - 110113093 AGAACTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744656 7 - 92844088 AGAACTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412707 7 + 96509753 AGAACTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883682 7 - 16982598 AGAACTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685269 7 - 3785965 AGAACTA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69862 7 - 179258 AGAACTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555405 7 - 5823884 AGAACTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38159 7 + 372756 ACAACTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275373 6 + 16356641 ACAACT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144632 6 + 1231380 ACAACT- i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56857002 7 + 57149010 CAAACTG i micMur3.chr18 C 0 C 0 e proCoq1.NW_012150197v1 1852098 7 - 2029793 I e canFam3.chr24 47600494 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786856 4 + 182113224 I e dasNov3.JH569290 236994 530 - 397369 I e aotNan1.NW_018500483v1 2674295 0 + 11732439 C e otoGar3.GL873542 22839218 132 + 22939663 I a score=328111.000000 s hg38.chr20_KI270870v1_alt 103947 78 + 183433 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg--------tgtgtATACttttttttttttgagacggagtctcactctgtc s panTro5.chr20 66430599 78 + 66533130 tgtgtgtgtgtgtgtgtgtgtatatatatatatata--------taCttgtttttttttttttttgagacggagtctcactctgtc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105745 73 + 62195757 tgtgtgtgtgtgtgtatatatatatatatat-------------TACtttttgttttttttttttgagacggagtctcactctgtc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 494970 86 - 578057 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtATATACttgtttttttttttttttgagacggagtctcactctatc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018137 73 - 110113093 tgtgtgtgtgtgtgtgtgtgtgtgtATATATATATA--------TACt-----ttttttttttttgagacggagtctcactctatc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744663 63 - 92844088 TGTGTGTGTGTG--TGTATATATATAC---------------------tttttttttctttttttgagacggagcctcactctgtc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412714 65 + 96509753 tgtgtgtgtgtgtgtgtATATATATAC---------------------tttttttttctttttttgagacggagcctcactctgtc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883689 65 - 16982598 TGTGTGTGTGTGTATATATATATATAC---------------------tttttttttctttttttgagacggagcctcactctgtc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685276 62 - 3785965 TGTGTGTGTGTG--TATATATATATAC----------------------ttttttttctttttttgagacggagcctcactctgtc i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69869 63 - 179258 TGTGTGTGTGTG--TATATATATATAC---------------------tttttttttctttttttgagacggagcctcactctgtc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555412 78 - 5823884 tgtgtgtgtgtgtgtgtatatatatatatatatatg--------tatttttttttttctttttttgagacggagcctcactctgtc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38166 61 + 372756 ----CGTGTATATATATATCTATAttt---------------------ccttttttttcttttttgagatggagtcttgctctgtc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275379 60 + 16356641 -----GTGTGTATATATATCTGTAttt---------------------ccttttttctcttttttgagatggagtctcactctgtc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144638 59 + 1231380 -----ATGTGTACATATATCTGTAttt---------------------ccttttttctc-tttttgagatggagtctcactctgtc i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1852098 7 - 2029793 I e canFam3.chr24 47600494 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786856 4 + 182113224 I e micMur3.chr18 56857009 0 + 57149010 C e dasNov3.JH569290 236994 530 - 397369 I e aotNan1.NW_018500483v1 2674295 0 + 11732439 C e otoGar3.GL873542 22839218 132 + 22939663 I a score=2179846.000000 s hg38.chr20_KI270870v1_alt 104025 261 + 183433 gcctaggctggagtgcagtggtgcaatctcagctcactgcaacctccacctcctgggttcaagtgatcctcctgcctcagcctcccaagtagctg-agactacaggcgtgcaccaccacacccaactaatttttgtattttcagtagagatggggtttcaccctgttggccaggcttgtcatgaactcctgacctcaagtgatccacccgcctcagcctcttaaagtgctgggattacagacgtgagccaccgtgcccagcc s panTro5.chr20 66430677 261 + 66533130 gcccaggctggagtgcagtggtgcaatctcagctcactgcaacctccacctcctgggttcaagtgatcctcctgcctcagcctcccaagtagctg-agactacaggcgtgcaccaccacacccgactaatttttgtattttcaatagagatggggtttcaccctgttggccaggcttgtcatgaactcctgacctcaagtgatccacccgcctcagcctcttaaagtgctgggattacagacgtgagccaccgtgcccagcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62105818 262 + 62195757 gcccaggctggagtgcagtggtgcaatctcagctcactgcaacctccacctcctgggttcaagtgatcctcctgcctcagcctcccaagtagctgtagactacaggcgtgcaccaccacacccgactaatttttgtattttcaatagagatggggtttcaccctgttggccaggcttgtcatgaactcctgacctcaagtgatccacccgcctcagcctcttaaagtgctgggattacagacgtgagccaccgtgcccagcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495056 261 - 578057 gcctaggctggagtgcagtggtgcaatctcagctcactgcaacccccacctcctgggttcaagtgatcctcctgcctcagcctcccaagtagctg-agactacaggcgtgcaccaccacacccgactaatttttgtattttcagtagagatggggtttcaccctgttggccaggcttatcatgaactcctgacctcaagtgatccacccgcctcagcctcttaaagtgctgggattacagacgtgagacaccatgcccagcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018210 261 - 110113093 acccaggctggagtgcagtggtgcaatctcagctcactgcaacctccgcctcccaggttcaagtgatcctcctgcctcagcctctcaagtagctg-agattacaggcacacgccaccacgcccgactaatttttgtattttcagtagagatgtggtttcaccctgttggccaggctggtcatgaactcctgacctcaagtgatccacctgcctcagcctctcaaagtgctgggattacagacatgagccaccgcgcccggcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744726 261 - 92844088 gcccaggctggagtgcagtggtgcaatcttggctcaccgcaacctccgcctcccaggttcaagtgatccttctgcctcagcctcctgagtaggtg-ggactacaggcatgcgccaccacacccaactaatttttgtatttttagtagacacagggtttcaccctgttgttcaggctggtcatgaactcctgacctcaagtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagctaccgcgcctggcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96412779 261 + 96509753 gcccaggctggagtgcagtggtgcaatcttggctcaccgcaacctccgcctcccaggttcaagtgatccttctgcctcagcctcctgagtaggtg-ggactacaggcatgcgccaccacacccaactaatttttgtatttttagtagacacagggtttcaccctgttgtccaggctggtcatgaactcctgacctcaagtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagctaccgcgcctggcc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16883754 261 - 16982598 gcccaggctggagtgcagtggtgcaatcttggctcactgcaacctccgcctcccaggttcaagtgatccttctgcctcagcctcctgagtaggtg-ggattacaggcatgcgccaccacacccaactaatttttgtatttttagtagacacagggtttcaccctgttgtccaggctggtcatgaactcctgacctcaagtgatctgcctgcctcggcctcccaaagtgctgggattacaggcgtgagctaccgcgcctggcc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685338 261 - 3785965 acccaggctggagtgcagtggtgcaatcttggctcaccgcaacctccacctcccaggttcaagtgatccttctgcctcagcctcctgagtaggtg-agactacaggcatgcgccaccacacccaactaatttttgtatttttagtagacacagggtttcaccctgttgtccaggctggtcatgaactcctgacctcaagtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggcc i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 69932 261 - 179258 acccaggctggagtgcagtggtgcaatcttggctcaccgcaacctccgcctcccaggttcaagtgatccttctgcctcagcctcctgagtaggtg-agactacaggcatgcgccaccacacccaactaatttttgtatttttagtagacacagggtttcaccctgttgtccaggctggtcatgaactcctgacctcaagtgacccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcctggcc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555490 261 - 5823884 gcccaggctggagtgcagtggtgcaatcttggctcactgcaacctctgcctcccaggttcaagtgatccttctgcctcagcctcctgagtagctg-agactacaggcatgcgctaccacacccaactaatttttgtatttttagtagacagggggtttcaccctgttgtccaggctggtcatgaactcctgacctcaagtgatccgcctgccttggcctcccaaaatgctgggattacaggcatgagccaccacacctggcc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38227 257 + 372756 acccaggctggagtgcagtgctgcagtctcggctcactgcaccttccgcctcctgggttcaaatgatcctccttcctcagcttcccaagcagctg-agactacaggtacctgccaccactccctactaatttttgtatttttagtagagacagggtttcaccatgttagccaggctgatcataaactc---acctcaagtgagccacctgctttggcctcccaaagcgctgggattataggcgggagccaccacgcccag-c i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275439 260 + 16356641 acccaggctggagtgcagtgctgcaatcttggctcactgcaccctccacctcctgggttcaaatgatcctcctgcctcagtctcctgagtagctg-agattacaggcacatgccaccacatcctactaatttttgtatttttagtagagacggggtttcaccatgttggccaggctgatcataaactcctaacctcaagtgatccacccgcttcggcctcccaaagtgctgcgatcataggc-ggagccaccgcacccagcc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144697 261 + 1231380 acccaggctggagtgcagtggcttgatctcggctcactgcaccctctgcctcctgggttcaaatgatcctcctgcctcagcctcccgagtagctg-agactacaggcacatgccaccacaccctactaatttttgtatttttagtagagacgggatttcaccatgttggccaggctgatcataaactcctaagctcaagtgatccacccgcttcagcctcccaaagtgctgggatcataggcgggagccaccgagcacagcc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674295 261 + 11732439 gcccaggctggagtgcagtggcgcaatctcggctcactgcaccctccgcctcctgggttcaaatgatcctcctgcctcagcctcccgagtagctg-agactacaggcacatgccaccacaccctactaatttttgtatttttagtagagatggggtttcaccatgttggccaggctgatcataaactcctaacctcaagtgatccacccacttcggcctcccaaagtgctgggttcataggcgggagccactgtgcccagcc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1852098 7 - 2029793 I e canFam3.chr24 47600494 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786856 4 + 182113224 I e micMur3.chr18 56857009 0 + 57149010 C e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=73869.000000 s hg38.chr20_KI270870v1_alt 104286 7 + 183433 AGAACCA s panTro5.chr20 66430938 7 + 66533130 agaacta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106080 7 + 62195757 agaacta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495317 7 - 578057 AGAACTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018471 7 - 110113093 AGAACTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744987 7 - 92844088 AGAACTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413040 7 + 96509753 AGAACTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884015 7 - 16982598 AGAACTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685599 7 - 3785965 AGAACTA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70193 7 - 179258 AGAACTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555751 7 - 5823884 AGAACTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38484 7 + 372756 AGAACTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275699 7 + 16356641 AGAACTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144958 7 + 1231380 AGAACTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674556 7 + 11732439 AGAACCA i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47600494 7 + 47698779 AGAACCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1852098 7 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786856 4 + 182113224 I e micMur3.chr18 56857009 0 + 57149010 C e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=112741.000000 s hg38.chr20_KI270870v1_alt 104293 12 + 183433 TGTATATTTTCA- s panTro5.chr20 66430945 12 + 66533130 tgtatatTTTCA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106087 12 + 62195757 tgtatatTTTCA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495324 12 - 578057 TGTATATTTTCA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018478 12 - 110113093 TGTACATTTTCA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92744994 12 - 92844088 TGTCTATTTTCA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413047 12 + 96509753 TGTCTATTTTCA- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884022 12 - 16982598 TGTCTATTTTCA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685606 12 - 3785965 TGTCTATTTTCA- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70200 12 - 179258 TGTCTATTTTCA- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555758 12 - 5823884 TGTCTATTTTCA- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38491 12 + 372756 CGTATATTTTCA- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275706 12 + 16356641 CGTGTATTTTCA- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144965 12 + 1231380 CGTGTATTTTCA- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674563 12 + 11732439 CGTATATTTTTA- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857009 12 + 57149010 TGTATATTTTGA- i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1852105 12 - 2029793 TGTATGTTTTGA- i proCoq1.NW_012150197v1 I 7 C 0 s canFam3.chr24 47600501 11 + 47698779 --TTTGTATTTAA i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181786856 4 + 182113224 I e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=1166047.000000 s hg38.chr20_KI270870v1_alt 104305 102 + 183433 AAAGAGCTTACATGATTAATCCTGACTTTACTAAACAGAAA-----TATAAAACAGAACAAAGCAAAAAC---------------------------------------ACACTTTTGAG-GAGACTGCTTTT-ATATGGCACTAAGA s panTro5.chr20 66430957 102 + 66533130 AAAGAGCTTACATGATTAATCCTGACTTTACTAAACAGAAA-----TATAAAACAGAACAAAGCAAAAAC---------------------------------------ACACTTTTGAG-GAGACTGCTTTT-ATATGGCACTAAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106099 102 + 62195757 AAAGAGCTGACATGATTAATCCTGACTTTACTAAACAGAAA-----TATAAAACAGAACAAAGCAAAAAC---------------------------------------ACACTTTTGAG-GAGACTGCTTTT-ATATGGCACTAAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495336 102 - 578057 AAAGAGCTTACATGATTAATCCTGACTTTACTAAACAGAAA-----TATAAAACAGAACAAAGCAAAAAC---------------------------------------ACACTTTTGAG-GAGACTGCTTTT-ATATGGCACTAAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018490 100 - 110113093 AATGAGCTTACATGATTAATGCTGACTTTACTAaaaagaaa-----tataaaacagaacaaagc-aaaac---------------------------------------aCACTTTTGA--GAGACTGCGTTT-ATATGGCACTAAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745006 102 - 92844088 AAAGAGCTTACATGGTTAATCCTGACTTAACTAaaaagaaa-----tataaaacagaacaaagcaaaaAC---------------------------------------ACACTTTTGAG-GAGACGGCTTTT-ATATGGCACTAAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413059 102 + 96509753 AAAGAGCTTACATGGTTAATCCTGACTTAACTAaaaagaaa-----tataaaacagaacaaagcaaaaAC---------------------------------------ACACTTTTGAG-GAGACGGCTTTT-ATATGGCACTAAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884034 102 - 16982598 AAAGAGCTTACATGGTTAATCCTGACTTAACTAaaaagaaa-----tataaaacagaacaaagcaaaaAC---------------------------------------ACACTTTTGAG-GAGACAGCTTTT-ATATAGCACTAAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685618 102 - 3785965 AAAGGGCTTACATGATTAATCCTGACTTAACTAaaaagaaa-----tataaaacagaacaaagcaaaaAC---------------------------------------ACACTTTTGAG-GAGACGGCTTTT-ATATGGCACTAAGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70212 102 - 179258 AAAGAGCTTGCATGATTAATCCTGACTTAACTAaaaagaaa-----tataaaacagaacaaagcaaaaAC---------------------------------------ACACTTTTGAG-GAGACGGCTTTT-ATATGGCACTAAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555770 102 - 5823884 AAAGAGCTTACACGATTAATCCTGAGTTAACTAaaaagaaa-----tataaaacagaacaaagcaaaaAC---------------------------------------ACACTTTTGAG-GAGACAGCTTTT-ATATGGCACTGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38503 91 + 372756 AAAGAGCTTACATGATTAATCCTGACTTTACTAAAAAGTAA-----TATAAAACAG-----------AAC---------------------------------------ACACTTTTGAG-GAGACTGCTTTT-ACATGGTACTAGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275718 102 + 16356641 AAAGAGCTTACATGATTAATCCTGACTTTTCTAAAAAGTAA-----TATAAAACAGAACAAAGCAAAAAC---------------------------------------ACACTTTTGAG-GAGACTGCTTTT-ACATGGTACAAGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1144977 102 + 1231380 AAAGAGCTTACGTGATTAATCCTGACTTTACTAAAAAGTAC-----TATAAAACAGAACAAAGCAAAAAC---------------------------------------ACAGTTTTGAG-GAGACTGCTTTT-ACATGGCACTAGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674575 102 + 11732439 AAAGAGCTTACATGATTAATCCTGACTTTACTAAAAAGTAA-----TATAAAACAGAACAAAGCAAAGAC---------------------------------------ACACTTTTGAG-GAGACTGCTTTT-ACTTGGTACTAGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857021 101 + 57149010 AAAAAACTTACATGATTAATCTTGACTTTATTAaaaagaaa-----tacaaaacagaacaaagcaaaaA----------------------------------------ATCCTCTATAG-GAGACTACTTTT-ATATGGTATTGAGA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1852117 102 - 2029793 AAAGAACCTACATGATTAATTTTGACTTTATTAaaaagaaa-----tacgaaacagaacaaagcaaaaAC---------------------------------------GTCCTCTATAG-GAGACTACTCTT-ATATGGTATTAAGA i proCoq1.NW_012150197v1 C 0 C 0 s mm10.chr2 181786860 141 + 182113224 AAAAAGCCTGAATGACTGGTCTTGCTTTTACTaa--agcaa-----tgcagaacagttcgaggcaaaaacaaaacaaaattaaatgaaaacaaaaacaaaaataaacaaaCACCCTCCAGTGAGATTGCTTTTAAGATAGTACCAAGG i mm10.chr2 I 4 C 0 s canFam3.chr24 47600512 106 + 47698779 AAAGAGCTTACGTGATTAATCTTGACTTTACAAAAAAAAAAAAAAGTACAAAACAGAACAAAATAGTAAC---------------------------------------ACCTTCTTGAGTGCGAC--CCATT-ATATGGCACTAACA i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 236994 530 - 397369 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=1505263.000000 s hg38.chr20_KI270870v1_alt 104407 127 + 183433 AAGCAAGTTAAATGGATGGACAAAGAGACAGTTCTCTTGGGTTA---------AT----TTGGCAAT-ATACAATGTATTTGCATTTATGAATTATTCTCCTCCCCACAGTTTTCATGGTTTTC----------CTATCGAAGGC--AGAACT- s panTro5.chr20 66431059 127 + 66533130 AAGCAAGTTAAATGGATGGACCAAGAGACAGTTCTCTTGGGTTA---------AT----TTGGCAAT-ATACAATGTATTTGCATTTATGAATTATTCTCCTCCCCACAGTTTTCATGGTTTTC----------CTATCGAAGGC--AGAACT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106201 127 + 62195757 AAGCAAGTTAAATGGATGGACCAAGAGACAGTTCTCTTGGGTTA---------AT----TTGGCAAT-ATACAATGTATTTGCATTTATGAATTATTCTCCTCCCCACAGTTTTCATGGTTTTC----------CTATCGAAGGC--AGAACT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495438 127 - 578057 AAGCAAGTTAAATGGATGGACAAAGAGACAGTTCTCTTGGGTTA---------AT----TTGGCAGT-ATACAATGTATTTGCAATTATGAGTTATTCTCCTCCCCACAGTTTTCATGGTTTTC----------CTATCGAAGGC--AGAACT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018590 127 - 110113093 AAGCAAGTTCAATGGATGGACAAAGAGACAGTTCTCTTGGGTTA---------AT----GTAGCAAT-GTACAACGTATTTGCATTTACGAATTATTCTCCTCCCCATAGTTTTCATGGTTTTC----------CTATTGAAGGC--AGAACT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745108 127 - 92844088 AAGCAAGTTAAATGGATGGACAAGGAGACAGTTCTCTCGGGTTA---------AT----TTGGCAGC-ATACAACGTATTTGCATTTATGAATTATTCTCCTCCCCATAGTTTTCATGGTTTTC----------CTACTGAAGGC--AGAACT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413161 127 + 96509753 AAGCAAGTTAAATGGATGGACAAGGAGACAGTTCTCTCGGGTTA---------AT----TTGGCAGC-ATACAACGTATTTGCATTTATGAATTATTCTCCTCCCCATAGTTTTCATGGTTTTC----------CTACTGAAGGC--AGAACT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884136 127 - 16982598 AAGCAAGTTAAATGGATGGACAAGGAGACAGTTCTCTCGGGTTA---------AT----TTGGCAGT-ATACAACGTATTTGCATTTATGAATTATTCTCCTCCCCATAGTTTTCATGGTTTTC----------CTACTGAAGGC--AGAACT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685720 127 - 3785965 AAGCAAGTTAAATGGATGGACAAGGAGACAGTTCTCTCGGGTTA---------AT----TTGGCAGT-ATACAACGTATTTGCATTTATGAATTATTCTCCTCCCCATAGTTTTCATGGTTTTC----------CTACTGAAGGC--AGAACT- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70314 127 - 179258 AAGCAAGTTAAATGGATGGACAAGGAGACAGTTCTCTCGGGTTA---------AT----TTGGCAGT-ATACAACGTATTTGCATTTATGAATTATTCTCCTCCCCATAGTTTTCATGGTTTTC----------CTACTGAAGGC--AGAACT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555872 127 - 5823884 AAGCAAGTTAAATGGATGGACAAGGAGACAGTTCTCTCGGGTTA---------AT----TTGGCAGT-ATACAACGTGTTTGCGTTTATGAATTATTCTCCTCCCCATAGTTTTCACGGTTTTC----------CTACTGAAGGC--AGAACT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38594 118 + 372756 AAGCAGGTTAAATGGATGGACAAAGAGACAATTCTCTTGGGTTA---------AT----TTGGCAAT-ATACAATGTATTTGCATTTGTGAATTATTCTCCTCCCCATA---------GTTTTC----------CTATTGAAGGC--AGAACT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275820 127 + 16356641 AAGCAAATTAAATGGATGGACAAAGAGACAATTCTCTTGGGTTA---------AT----TTGGCAAT-ATACAATGTATTTGCATTTGTGAATTATTCTCCTCCCCATAGTTTTCCTGGTTTTC----------CTAATGAAGGC--AGCACT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145079 127 + 1231380 AAGCAAGTTAAATGGATGGACAAAGAGACAATTCTCTTGGGTTA---------AT----TTGGCAAT-ATACAATGTATTTGCATTTGTGAATTATTCTCCTCCCCATAGTTTTCCTGGTTTTC----------CTATTGAAGGC--AGAACT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674677 125 + 11732439 AAGCAAGTTAAATGGATGGACAA--AGACAATTCTCTTGGGTCA---------AT----TTGGCAAT-ACACAACGTATTTGCATTTGTGAATTATTCTCCTCCCCATAGTTCTCCTGGTTTTC----------CTGTTGAAGGC--AGAACT- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857122 122 + 57149010 AAGCAAGTTAAATGAATGGATGAAGAGACAATTCTCTCTGGTTA---------ATAAATGTGGCAAA-ACATGGTGCACTTGCATTTGTAAATTACTCTCCTCCCCATAGTTTTCA-------------------TATTGAAGAC--AGAAGT- i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1852219 122 - 2029793 AAGCAAGTTACGTGAATGGATGAAGAGACAATTCTCTCTGGTTA---------ATAGACGAGGCAAA-ACATGATGTACTTGCATTTGTAAATTACTCTCCTCCCCATAGTTTTCA-------------------TACTGAAGGC--AGAAGT- i proCoq1.NW_012150197v1 C 0 C 0 s mm10.chr2 181787001 120 + 182113224 AATCAAGTTTAGTGCCTGGATAGAGACAGAGTTCTCTCAGGCTAAAGTAATAGAT----ATGGCTGA-ATACA--GTGTTTGTATTTGGAAATTATTTTCTCC--------------AATTTTC----------CTATACAAGGT--AAAACT- i mm10.chr2 C 0 I 1 s canFam3.chr24 47600618 118 + 47698779 AAGCAAGTTAAAGGGAAGGATGAAGAGACAATTCTCTCTGGTTA---------ATGGATGTGGCAAA-ACAGGATGTCTCTGCATTTATAAATTCTCTTCTGCACCG-------------TTTC----------CTCTTGAAAAC--AGAACT- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 237524 134 - 397369 AGGCAAGTTAGATG-ATGGATGAAGAGACAATTCTCTCTGG--A---------AT----GGTGCAGCAAAACAGTGTATTGGCATTTGCAAGTGA----CCTTCCTGCAGTTTTCATGTTTTCCTCTTGAAATACTATTGCAAGCGAAGAAACG i dasNov3.JH569290 I 530 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e otoGar3.GL873542 22839218 132 + 22939663 I a score=672238.000000 s hg38.chr20_KI270870v1_alt 104534 55 + 183433 ATTGAAATATTAATTAGAGCCT------------------------------CAAGACATGCTCGCAGTGGCAGAATGAAGCTGG s panTro5.chr20 66431186 55 + 66533130 GTTGAAATATTAATTAGAGCCT------------------------------CCAGACATGCTCGCAGTGGCAGAATGAAGCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106328 55 + 62195757 ATTGAAATATTAATTAGAGCCT------------------------------CCAGACATGCTCGCAGTGGCAGAATGAAGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495565 55 - 578057 ATTGAAATATTAATTAGAGCCT------------------------------CAAGACATGCTCGCAGTGGCAGAATGAAGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018717 55 - 110113093 ATTGAAATATTAATTGGAGCCT------------------------------CAAGACATGCTCGCAGTGGCAGAATGAAGCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745235 54 - 92844088 ATTGAAATATTAATTACAGCCT-------------------------------AAGACAAGCTCGCAGTGGCAGAATGAAGTTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413288 54 + 96509753 ATTGAAATATTAATTACAGCCT-------------------------------AAGACAAGCTCGCAGTGGCAGAATGAAGTTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884263 54 - 16982598 ATTGAAATATTAATTACAGCCT-------------------------------AAGACAAGCTCGCAGTGGCAGAATGAAGTTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3685847 54 - 3785965 ATTGAAATATTAATTACAGCCT-------------------------------AAGACATGCTCGCAGTGGCAGAATGAAGTTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70441 54 - 179258 ATTGAAATATTAATTACAGCCT-------------------------------AAGACATGCTCGCAGTGGCAGAATGAAGTTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5555999 54 - 5823884 ATTGAAATATTAATTACAGCCT-------------------------------AAGACATGCTCACAGTGGCAGAATGAAGTTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38712 55 + 372756 ATTGAAATATTAATTAGAGCCC------------------------------CAAGACATGTTCGCACTGGCAGAATGAAGTTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16275947 55 + 16356641 ATTGAAATATTAATTAGAGCCT------------------------------TAAGACATGTTCACGCTGGCAGAATGAAGTTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145206 55 + 1231380 ATTGAAATATTAATTAGAGCCT------------------------------TAAGACATGTTCGAGCTGGCAGAATGAAGTTAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2674802 55 + 11732439 ATTGAAATATTAATTAGAGCCC------------------------------TAAGACATGTTCACGCTGGCAGAATGAAGTTGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857244 55 + 57149010 ATTGAAATATTAATCAGGGCTG------------------------------TAAGACATGCTCCTGGTGGCAGAATGAAGTTGG i micMur3.chr18 C 0 I 138 s proCoq1.NW_012150197v1 1852341 55 - 2029793 ACTGAAATATTAATTAGAGCTG------------------------------TAAGACACGCTCCCGGCGGCAGAACGAAGTTGG i proCoq1.NW_012150197v1 C 0 I 143 s otoGar3.GL873542 22839350 55 + 22939663 ATTGAAATATTAATTAGAGCTG------------------------------TAAGACATGTTCTCAGTGGCAGAATGAAGTTGG i otoGar3.GL873542 I 132 C 0 s mm10.chr2 181787122 49 + 182113224 GATAAAAT----GTCAGAACTA-------------------------------AAGTTGTGCTC-TATCAGCAGTGTAACATTGA i mm10.chr2 I 1 I 2 s canFam3.chr24 47600736 85 + 47698779 GTTGAAATATTAATTAGAGCGGAGTGATGGTTTAAGGAGTGGAGGGAAGCTGTAAGACAGGCTCCTGGTGGCAGAAAGACGTTGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 237658 55 - 397369 GTTTACAGGGCATAGGGAGGCG------------------------------TGGAGCATGGTCTGAGCGGCAGAATCAAGTTGA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=1207352.000000 s hg38.chr20_KI270870v1_alt 104589 126 + 183433 CATTTGGAGAAACAGAG----CA----GAC---GTT---CTTGAGAAAGGTTGCCG-GCCCAGCAGTAAGAGTGGGTGATGGGGTCGTTCTG--------------------------CCTTTTCACTCTCAA-GGGGAGAGGTCACCGGGCTATCTGTGGGTTGCGC s panTro5.chr20 66431241 127 + 66533130 CATTTGGAGAAACAGAG----CA----GAC---GTT---CTTGAGAAAGGTTGCCG-GCCCAGCAGTGAGAGTGGGTGATGGGGTCGTTCTG--------------------------CCTTTTCACTCTCAAGGGGGAGAGGGCACTGGGCTATTTGTGGGTTACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106383 126 + 62195757 CATTTGGAGAAACAGAG----CA----GAC---GTT---CTTGAGGAAGGTTGCCG-GCCCAGCAGTGAGAGTGGGTGATGGGGTCGTTCTG--------------------------CCTTTTCACTCTCAA-GGGGAGAGGGCACTGGGCTATTTGTGGGTTACAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495620 126 - 578057 CATTTGGAGAAACAGAG----CA----GAC---GTT---CTTGAGAAAGGTTGCCG-GCCCAGCAGTGAGAGTGGGTGATGGGGTCGTTCTG--------------------------CCTTTTCACTCTCAA-GGGGAGAGGGCACTGGGCTATTTGTGGGTTGCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018772 126 - 110113093 CATTTGGAGAAACAGAG----CA----GAC---GTT---CTTGAGAAAGGTTGCCG-GCCCAGCAGTGAGAGTGGGTGATGGGGTCGTTCTG--------------------------CCTTTTCACTCTCAA-GGGGAGAGGGGACTGGGCTATTTCCAGGTTGCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745289 139 - 92844088 CA-TTGGAGAAACAGAA----CA----GGC---GTT---CCTGAGGGAGATTGCCG-GCCCAGCAGTGAGAGTGGGTAATGGGGTCATTCTGTCTC------------AGCAAAGGGAACTTTTCACCCTCAA-GGGGAGAGGGCACTGGGTTATTTGTGGGTTGCAC i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96413342 139 + 96509753 CA-TTGGAGAAACAGAG----CA----GGC---GTT---CCTGAGGGAGATTGCCG-GCCCAGCAGTGAGAGTGGGTAATGGGGTCATTCTGTCTC------------AGCAAAGGGAACTTTTCACCCTCAA-GGGGAGAGGGCACTGGGTTATTTGTGGGTTGCAC i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16884317 139 - 16982598 CA-TTGGAGAAACAGAG----CA----GGC---GTT---CTTGAGGGAGATTGCCG-GCCCAGCAGTGAGAGTGGGTAATGGGGTCATTCTGTCTC------------AGCAAAGGGACCTTTTCACCCTCAA-GGGGAGAGGGCACTGGGTTATTTGTGGGTTGCAC i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3685901 139 - 3785965 CA-TTGGAGAAACAGAG----CA----GAC---GTT---CTTGAGGGAGATTGCCG-GCCCAGCAGTGAGAGTGGGTAATGGGGTCATTCTGTCTC------------AACAAAGGGACCTTTTCACCCTCAT-GAGGAGAGGGCACTGGGTTATTTGTGGGTTGCAC i cerAty1.NW_012001373v1 C 0 I 1 s manLeu1.NW_012101652v1 70495 139 - 179258 CA-TTGGAGAAACGGAG----CA----GAC---GTT---CTTGAGGGAGATTGCCG-GCCCAGCAGTGAGAGTGGGTAATGGGGTCATTCTGTCTC------------AACAAAGGGACCTTTTCACCCTCAA-GAGGAGAGGGCACTGGGTTATTTGTGGGTTGCAC i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5556053 139 - 5823884 CA-TTGGAGAAACAGAG----CA----GAC---GTT---CTTGAGAGAGATTGCCG-GCCCAGCAGTGAGAGTGGGTCATGGGGTCATTCTGTCTC------------AACAAAGGGACCTTTTCACCCTCAA-GGGGAGAGGGCACTGGGTTATTTGTGGGTTGCAC i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chrUn_GL286459 38767 138 + 372756 CA-TTGGAGCAACAGAG----CA----GAG---GTT---CTTGAGAGAGATT-CTG-GCCCAGCAGTGAGAGTGGGTAATGGGGTCATCCTGTCTC------------AACAAAGGAAACTTTTCACCCTCAA-GGGGAGAGGGCACTGGCTTATTTGTGAGTTGTAC i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16276002 138 + 16356641 CA-TTGGAGCAACAGAG----CT----GAG---GTT---CTTGAGAGAGATT-CTG-GCCCAGCAGTGAGAGTGGGTAATGGGGTCATCCTGTCTC------------AACAAAGGAAACTTTTCACCCTCAA-GGGGAGAGGGCACTGGGTTATTTGTGGGTTGTAT i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1145261 136 + 1231380 CA-TTGGAGCAACAGAG----CT----GAG---GTT---CTTGAGAGAGATT-CTG-GCCCAGCAGTGAGAGTGGGCAATGGGGTCATCCTGTCTC------------AACAAAGGAA--TCTTCACCCTCAA-GGGGAGAGGGCACTGGGTTATTTGTGGGTTGTAC i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2674857 137 + 11732439 CA-TTGGAGCAACAGAG----CA----GAG---GTT---CTTGAGAGGGATT-CTG-GCCCAGCAGTGAGAGTGGGTAATGGGGTCGTCCTGTCTC-------------ACAAAGGAACCTTTTCACCCTCAA-GGGGAGAGGGCGCTGGGTTATTTGTGGGTTGTGC i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22839405 136 + 22939663 CA-TCAGAGAAACAGAG----CA----GACATGGCT---CTTGAGG----TTGCTG-GCCTGGTGATAAGAGTGGG--GTGAGGTTGGCCTGTTTC------------AACAAAAGGGCCTTTTCACCCTCAA-GGGGAGGGGACTTTGAATTATTTGTGAGATGTAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787173 118 + 182113224 ---TTAGAGAAACAG------CA----GAT---GTT---CCTGGGAAAGATCCCCG-ATCTCACAGTGGAGCAAGATTAT---------TTGTCTG------------AACAAAGAGACCCTTTCACCCTCAA-GGCAAGAGGCGATTGAGTTA--------ATGTGC i mm10.chr2 I 2 C 0 s canFam3.chr24 47600821 137 + 47698779 --CCCACAGAAACAGAG----CGCGACGCT---GCT---CTTGAGAGAGATCACCGCGCCCCATGGCGGGTGGGG---ACGGGGTCTGCCCGGCGC------------G--AAAGGGGCCTTTTCGCCCTCG--GGTGAGAGGCCATTCAGTAATCCCTGGGCCGGAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 237713 150 - 397369 TA-TGAAAGAAACAGGAAGTTCA----AAT---GTCCCGCTTGGCTGAGAGTGTCGGGTCCCACAGCG-GAGCGGG--AAGTGGCTGCCCTGCCCTTGGCTTGGCTGTGACAAAGGGGCCTTTTCACCCTGCA-GGCTGGAGGCC------TCGATCCTGGATTATAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1852396 143 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56857299 138 + 57149010 I a score=64230.000000 s hg38.chr20_KI270870v1_alt 104715 5 + 183433 AAAAA s panTro5.chr20 66431368 5 + 66533130 AAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106509 5 + 62195757 AAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495746 5 - 578057 AAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018898 5 - 110113093 AAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745429 5 - 92844088 AAAAA i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96413482 5 + 96509753 AAAAA i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16884457 5 - 16982598 AAAAA i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3686041 5 - 3785965 AAAAA i cerAty1.NW_012001373v1 I 1 C 0 s manLeu1.NW_012101652v1 70635 5 - 179258 AAAAA i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5556193 5 - 5823884 AAAAA i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chrUn_GL286459 38906 5 + 372756 AAAAC i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16276141 5 + 16356641 AAAAC i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1145398 5 + 1231380 AAAGC i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2674995 5 + 11732439 AAAAC i aotNan1.NW_018500483v1 I 1 C 0 s micMur3.chr18 56857437 4 + 57149010 -AAAA i micMur3.chr18 I 138 I 1 s otoGar3.GL873542 22839541 5 + 22939663 AAAAA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181787291 5 + 182113224 AAAAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47600958 5 + 47698779 AGAAA i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 237863 5 - 397369 AAAAA i dasNov3.JH569290 C 0 I 1 e proCoq1.NW_012150197v1 1852396 143 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=564996.000000 s hg38.chr20_KI270870v1_alt 104720 35 + 183433 AGGGACCTGGTTGGCTTGTGTTTGGAACAAGTAAA s panTro5.chr20 66431373 35 + 66533130 AGGGACCTGGTTGGCTCGTGTTTGGAACAAGTAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106514 35 + 62195757 AGGGACCTGGTTGGCTCGTGTTTGGAACAAGTAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495751 35 - 578057 AGGGACCTGGTTGGCTCGTGTTTGGAACAAGTAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018903 35 - 110113093 AGGGACCTGGTTGGCTTGTGTTTGGAACAAGTAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745434 35 - 92844088 AGGGACCTGGTTGGTTTGTGTTTGGAACAAGTGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413487 35 + 96509753 AGGGACCTGGTTGGTTTGTGTTTGGAACAAGTGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884462 35 - 16982598 AGGGACCTGGTTGGTTTGTGTTTGGAACAAGTGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686046 35 - 3785965 AGGGACCTGGTTGGTTTGTGTTTGGAACAAGTGAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70640 35 - 179258 AGGGACCTGGTTGGTTTGTGTTTGGAACAAGTGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556198 35 - 5823884 AGGGACCTGGTTGGCTTGTGTTTGGAACAAGTGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38911 35 + 372756 AGGGACCTGGTTGGCTTGTGTTTGGAACAAGTAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276146 35 + 16356641 AGGGACCTGGTTGGCTTCTGTTTGGAGCAAGTAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145403 35 + 1231380 AGGGACCTGGTTGGCTTGTGTTTGGAACAAGTAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675000 35 + 11732439 AGGGACCTGGTTGGCTTGTGTTTGGAACAAGTAAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857442 35 + 57149010 AGGGACCTGGTTGGTTTGTGCATGGAACAAGTAAA i micMur3.chr18 I 1 I 38 s proCoq1.NW_012150197v1 1852539 35 - 2029793 AGGGACCTGGTTGGTTTGTGCTTGGAACAAGTAAA i proCoq1.NW_012150197v1 I 143 C 0 s otoGar3.GL873542 22839547 35 + 22939663 AGGGACTTAGTTGGTTTATGCTTGGAACAAGTAAA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181787296 29 + 182113224 AGTTACT------GTTTGTGCTTGGAAGAAATAAA i mm10.chr2 C 0 I 2 s canFam3.chr24 47600964 35 + 47698779 AGAGACTTGATTGGCCTGTGCTTGGAACAAGTGAA i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 237869 35 - 397369 AGGGACCTGCTTGGTGTGTGCTGGGTTCAAGTAAA i dasNov3.JH569290 I 1 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=247569.000000 s hg38.chr20_KI270870v1_alt 104755 22 + 183433 GTGTGTTTT--AA-----AAATCAATGAA s panTro5.chr20 66431408 22 + 66533130 GTGTGTTTT--AA-----AAATCAATGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106549 22 + 62195757 GTGTGTTTT--AA-----AAATCAATGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495786 22 - 578057 GTGTGTTTT--AA-----AAATCAATGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018938 22 - 110113093 GTGTGTTTT--AA-----AAATCAATGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745469 22 - 92844088 GTGTGTTTT--AA-----AAATCAATGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413522 22 + 96509753 GTGTGTTTT--AA-----AAATCAATGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884497 22 - 16982598 GTGTGTTTT--AA-----AAATCAATGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686081 22 - 3785965 GTGTGTTTT--AA-----AAATCAATGAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70675 22 - 179258 GTGTGTTTT--AA-----AAATCAATGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556233 22 - 5823884 GTGTGTTTT--AA-----AAATCAATGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38946 22 + 372756 GTGTGTTTT--AA-----ACATCAATGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276181 22 + 16356641 GTGTGTTTT--AA-----ACATCAATGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145438 22 + 1231380 GTGTGTTTT--AA-----ACATCAATGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675035 22 + 11732439 ATGTATTTT--AA-----ACATCAATGAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1852574 21 - 2029793 -TGGTTTTT--AA-----AATTCAACGAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22839582 23 + 22939663 -TGGTTTTCTAAA-----AAATCAACAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787327 22 + 182113224 GGTTGTTTA--AA-----AAAACAAAAAC i mm10.chr2 I 2 I 28 s canFam3.chr24 47600999 25 + 47698779 GGGTTCTTA--AA--AATAAATCAATGAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 237904 26 - 397369 -GGTTTTTG--GAAAAATAAATCTATGAA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56857477 38 + 57149010 I a score=663051.000000 s hg38.chr20_KI270870v1_alt 104777 46 + 183433 AAATTGAGAAGTGTTTAATTTTCTTTGCATCATTGAGCTGCCCTTT s panTro5.chr20 66431430 46 + 66533130 AAATTGAGAAGTGTTTCATTTTCTTTGCATCATTGAGCTGCCCTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106571 46 + 62195757 AAATTGAGAAGTGTTTCATTTTCTTTGCATCATTGAGCTGCCCTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495808 46 - 578057 AAATTGAGAAGTGTTTAATTTTCTTTGCATCATTGAGCTGCCCTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110018960 46 - 110113093 AAATTGAGAAGCGTTTAATTTTCTTTGCGTCATTGAGCTGCCCTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745491 46 - 92844088 AAATTGAGAAGTGTTTAATTTTCTTTGCATCATTGAGCTGCCCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413544 46 + 96509753 AAATTGAGAAGTGTTTAATTTTCTTTGCATCATTGAGCTGCCCTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884519 46 - 16982598 AAATTGAGAAGTGTTTAATTTTCTTTGCATCATTGAGCTGCCCTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686103 46 - 3785965 AAATTGAGAAGTGTTTAATTTTCTTTGCATCATTGAGCTGCCCTTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70697 46 - 179258 AAATTGAGAAGTGTTTAATTTTCTTTGCATCATTGAGCTGCCCTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556255 46 - 5823884 AAATTGAGAAGTGTTTAATTTTCTTTGCATCATTGAGCTGCCCTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 38968 46 + 372756 AAATTGAGAAGTGTTTAGTTTTCTTCGAATCATTGAGCTGCCCTTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276203 46 + 16356641 AAATTGAGAAGTGTTTAATCTTCTTCGTATCATTGAGCTGCCCTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145460 46 + 1231380 AAATTGAGGAGTGTTTAATTTTCTTCGCATCATTGAGCTGCCCTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675057 45 + 11732439 AAATTGACAAGTGTTTAATTTTCTTTGCATCGTTGAGCTGCCTGT- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857515 46 + 57149010 AAATTGTGAAGTGTCTCATTGTCTTTGCACCACTGAGCTGCCCTTT i micMur3.chr18 I 38 I 105 s proCoq1.NW_012150197v1 1852595 46 - 2029793 AAGTTGAGAAGTGTCTCATTGTCTTTGCACCATGGAGCTGCCCTTT i proCoq1.NW_012150197v1 C 0 I 283 s otoGar3.GL873542 22839605 46 + 22939663 AAATCGAGAAGTGTCTCATTATCTTTGTACCACTGAGCTGTCTTTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787377 46 + 182113224 AAATTGAGAAGCACCTCATTGCCTTTGCATCAGTCAGTTGTACCAT i mm10.chr2 I 28 I 4 s canFam3.chr24 47601024 42 + 47698779 ACATTGGAAAGTGTCTCATTGTCTCTGCGCCCGCGAGTGGCC---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 237930 46 - 397369 ATTTTGGGAAGTGACTCATTGCCTTTGCATCAACGAGCTTCCCTTT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=122569.000000 s hg38.chr20_KI270870v1_alt 104823 15 + 183433 AGGGCCC----AGCTGTCA s panTro5.chr20 66431476 15 + 66533130 AGGGCCC----AGCTGTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106617 15 + 62195757 AGGGCCC----AGCTGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495854 15 - 578057 AGGGCCC----AGCTGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019006 15 - 110113093 AGGGCCC----AGCTGTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745537 15 - 92844088 GGGGCCC----AGCTGTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413590 15 + 96509753 GGGGCCC----AGCTGTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884565 15 - 16982598 GGGGCCC----AGCTGTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686149 15 - 3785965 GGGGCCC----AGCTGTCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70743 15 - 179258 GGGGCCC----AGCTGTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556301 15 - 5823884 GGGGCCC----AGCTGTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39014 15 + 372756 AGGGCAC----AGCTGCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276249 15 + 16356641 AGGGCAC----AGCTGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145506 15 + 1231380 AGGGCAC----AGCTGCCA i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22839651 15 + 22939663 TAGGCAC----ACCTGCCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787427 11 + 182113224 AGGGACC----A----TTG i mm10.chr2 I 4 C 0 s canFam3.chr24 47601066 5 + 47698779 --------------TGTCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 237976 19 - 397369 AGGGCCCCTGGAGTTGCCA i dasNov3.JH569290 C 0 I 1052 e proCoq1.NW_012150197v1 1852641 283 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56857561 105 + 57149010 I e aotNan1.NW_018500483v1 2675102 0 + 11732439 C a score=764432.000000 s hg38.chr20_KI270870v1_alt 104838 93 + 183433 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGTCCAGGGATCA-CCAA------GGTGAGCCTGGGTGGTGC-TGGGCACAGGGCCGCCCCCAGCAC------ s panTro5.chr20 66431491 93 + 66533130 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGCCCAGGGATCA-CCAA------GGTGAGCCTGGGTGGTGC-TGGGCACTGGGCCGCCCCCAGCAC------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106632 93 + 62195757 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGCCCAGGGATCA-CCAA------GGTGAGCCTGGGTGGTGC-TGGGCACTGGGCCGCCCCCAGCAC------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495869 92 - 578057 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGCCCAGGGATCA-CCAA------GGTGAGCCTGGGTGGTGT-GGGGCACACGGCCA-CCCCAGCAC------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019021 93 - 110113093 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGCCCAGTGATCA-CCAA------GGTGAACCTGGGTGGTGC-TGGGCACAGGGCCGCCCCCAGCAC------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745552 93 - 92844088 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGCCCAGTGATCG-CCAA------GGTGAGCGTGGGTGGTGC-TGGGCACAGGGCCACCCCCAGCAC------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413605 93 + 96509753 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGCCCAGTGATCG-CCAA------GGTGAGCGTGGGTGGTGC-TGGGCACAGGGCCACCCCCAGCAC------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884580 93 - 16982598 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGCCCAGTGATCG-CCAA------GGTGAGCGTGGGTGGTGC-TGGGCACAGGGCCACCCCCAGCAC------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686164 93 - 3785965 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGCCCAGTGATCG-CCAA------GGTGAGCGTGGGTGGTGC-TGGGCACAGGGCCACCCCCAGCAC------ i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70758 93 - 179258 TTGTGTGGTGGGGG-CAGAAGG-TCTGGGG--GGCTGCCGCCCAGTGATCG-CCAA------GGTAAGCGTGGGTGGTGC-TGGGCACAGGGCCACCCCCAGCAC------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556316 93 - 5823884 TTGTGTGGTGGGGG-CAGAAGG-TCTAGGG--GGCTGCCACCCAGTGATTG-CCAA------GGTGAGCGTGGGTGGTAC-TGGGCACAGGACCACCCGCAGCAC------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39029 91 + 372756 CTGTGTGATGGGGG-CAGAAGG-TCTGGGG--GGTTGCCA-CCAGTAATCA-CCAG------GATGAGCCTGGGTGGTGC-TGGGCACATGGCTGCCCCCA-CAC------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276264 92 + 16356641 CCATGTGAGGGGTG-CGGAAGG-TCTGGGG--GGCTGCCGCCCAGTAATCA-CCAG------GATAAGCCTGGGTGGTGC-GGGGCACACGGCTGCCCCCA-CAT------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145521 91 + 1231380 CTGTGTG-GGGGGG-TGGAAGG-TCTGGGG--TGCTGCCGCCCAGTAATCA-CCAG------GATGAGCCTGGGTGGTGC-TGGGCACATGGCTGCCGCCA-TAC------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675102 89 + 11732439 --GTGTAGCGGGGG-CAGAAGG-TCTGGGG---GCTGCTGCCCGGCAATCA-CCAG------GATGAGCCTGGGCGGTGC-TGGGCACACGGCTGCCCCCA-CAC------ i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22839666 68 + 22939663 TA--GGGGTGCAGG-CAGCAGA-CCTGGG----GCTGTGGCCT-GTGATCAGCTAG------GGTGAGCCTGGAGGCTGC-TGG--------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787438 93 + 182113224 ATGTATGGAACAGG-CAGGAAG-TCTTAGG--ATCTGATGCCAGG-------CCAATTAGTCAGTGAGTCTGGGCAGTGT-TAAGCACAGTGCTTCCCTGAGCAT------ i mm10.chr2 C 0 I 27 s canFam3.chr24 47601071 77 + 47698779 TTGTGGAGTGAGGGACAGAAGGCCCTTGGG--GGCTGCCAGGAAGCCA--A-GCAG------CCCGAGTCCAGGTGCTGTATGGGCGC----------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 239047 100 - 397369 TTAGGTGCAGGGTG-TTGGATG-CCAGGAGCTGGGTGCCAGCCAGGTGTTG-GCAT------TG-GATGTTGGGTGCTGG-TGGGCTCTAGCCTGGATCTGCCACAGGCAG i dasNov3.JH569290 I 1052 C 0 e proCoq1.NW_012150197v1 1852641 283 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56857561 105 + 57149010 I a score=316505.000000 s hg38.chr20_KI270870v1_alt 104931 37 + 183433 CCGCTCTCCATCTACCACATCGTG-GTGCCGATCTTGC s panTro5.chr20 66431584 37 + 66533130 CCGCTCTCCATCTACCACATCGTG-GTGCCGATCTTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106725 37 + 62195757 CCGCTCTCCATCTACCACATCGTG-GTGCCGATCTTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495961 37 - 578057 CCGCTCTCCATCTACCACATCGTG-GTGCCGATCTTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019114 37 - 110113093 CCGCTCTCCATCTACCACATCGTG-GTGCCGATCTTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745645 37 - 92844088 CCGCTCTCCATCTACCACATCAGG-GTGCTGATCTTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413698 37 + 96509753 CCGCTCTCCATCTACCACATCAGG-GTGCTGATCTTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884673 37 - 16982598 CCGCTCTCCATCTACCACATCAGG-GTGCTGATCTTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686257 37 - 3785965 CCACTCTCCATCTACCACATCAGG-GTGCTGATCTTGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70851 37 - 179258 CCACTCTCCATCTACCACATCAGG-GTGCTGATCTTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556409 37 - 5823884 CCGCTCTCCATCTACCACATCAGG-GTGCTGATCTTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39120 36 + 372756 CC-CTCTCCATCTCCCACATCGGG-GTGCTGATCTTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276356 34 + 16356641 CCACTCTCCATCT---ACATCGGG-GTCCTGATCTTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145612 34 + 1231380 CCACTCTCCATCT---ACATCAGG-GTCCTGATCTTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675191 37 + 11732439 CCACTCTCCATCTACCACATCGGG-GTGCTGATCTTGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22839734 30 + 22939663 -------TCATTTGCCATATAGGG-TCACTGATGCTGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47601148 19 + 47698779 CGGCTCTCCATCCATGACA------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 239147 38 - 397369 AAACTTTCCATCTACTATGCGGGGCCTGCCAATTTTGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1852641 283 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181787531 27 + 182113224 I e micMur3.chr18 56857561 105 + 57149010 I a score=535376.000000 s hg38.chr20_KI270870v1_alt 104968 41 + 183433 -GGCAG-GAGGAGAGCAGAGAACTCACCTCTGAAGTGCTTTGA s panTro5.chr20 66431621 41 + 66533130 -GGCAG-GAGGAGAGCAGAGAACTCACCTCTGAAGTGCTTTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106762 41 + 62195757 -GGCAG-GAGGAGAGCAGAGAACTCACCTCTGAAGTGCTTTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 495998 41 - 578057 -GGCAG-AAGGAGAGCAGAGAACTCACCTCTGAAGTGCTTTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019151 41 - 110113093 -GGCAG-GAGGATAGCAGAGAACTCACCTCTGAAGTGCTTTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745682 41 - 92844088 -TGCAG-GAGGAGAGCAGAGAATCCACCTCTGAAGTGCTTTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413735 41 + 96509753 -TGCAG-GAGGAGAGCAGAGAATCCACCTCTGAAGTGCTTTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884710 41 - 16982598 -TGCAG-GAGGAGAGCAGAGAATCCACCTCTGAAGTGCTTTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686294 41 - 3785965 -TGCAG-GAGGAGAGCAGAGAATCCACCTCTGAAGTGCTTTGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70888 41 - 179258 -TGCAG-GAGGAGAGCAGAGAATCCACCTCTGAAGTGCTTTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556446 41 - 5823884 -TGCAG-GAGGAGAGCAGAGAATCCACCTCTGAAGTGCTTTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39156 41 + 372756 -GGCAG-GAGGAGAGCAGAGAACCCACCTCTGAAGTGCTTTGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276390 41 + 16356641 -GGCAG-GAGGAGAGCAGAGAACCCACCTCTGAAGTGCTTTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145646 41 + 1231380 -GGCAG-GAGGAGAGCAGAGAACCCACCTCTGAAGTGCTTTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675228 41 + 11732439 -GGCAG-GAGGACAGCAGAGAACCCACCTCTGAAGTGCTTTGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857666 41 + 57149010 -GGCAG-GAGGACAGCAGAGAACCCACCTCTGAGGTGCTTTGA i micMur3.chr18 I 105 I 131 s otoGar3.GL873542 22839764 41 + 22939663 -GGCAG-GAGGACAGCAAAGAACCCACCTCTGTAGTACTTTTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787558 36 + 182113224 -GGTAA-GAGGTCTATAGA----TGCCTTCTGCAGTACTTTG- i mm10.chr2 I 27 C 0 s canFam3.chr24 47601167 40 + 47698779 -AGCAGTGAGGCCGGCAGAGAACCCGCCCCTGGAGAACCTT-- i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 239185 40 - 397369 AGTCAA-GAGGACAGCAGAGAACCCATCTTTGAAGTGCTGA-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1852641 283 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=748474.000000 s hg38.chr20_KI270870v1_alt 105009 102 + 183433 CTTCTTTCGAAAAGAAAAGTGATGTAAA----T--CAAGCAGTGCTGGTTTTGT---------------CCAGATGCTTTCGCGTC-AG-CCGGCACTGCTGATTTCAAATAGCTCAGA----AACCAG s panTro5.chr20 66431662 102 + 66533130 CTTCTTTTGAAAAGAAAAGTGATGTAAA----T--CAAGCAGTGCTGGTTTTGT---------------CCAGATGCTTTCGCGTC-AG-CCGGCACTGCTGATTTCAAATAGCTCAGA----AACCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106803 102 + 62195757 CTTCTTTTGAAAAGAAAAGTGATGTAAA----T--CAAGCAGTGCTGGTTTTGT---------------CCAGATGCTTTCGCGTC-AG-CCGGCACTGCTGATTTCAAATAGCTCAGA----AACCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 496039 102 - 578057 CTTCTTTCGAAAAGAAAAGTGATGTAAA----T--CAAGCAGTGCTGGTTTTGT---------------CCAGATGCTTTCGCGTC-AG-CCGGCACTGCTGATTTCAAATAGCTCAGA----AACCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019192 102 - 110113093 CTTCTTTCGAAAAGAAAAGTGATGTAAA----T--CAAGCAGTGCTGGTTTTGT---------------CCAGATGCTTTCGCATC-AG-CTGGCACTGCTGATTTCAAACAGCTCAGA----AACCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745723 113 - 92844088 GTTCTTTCGAAAAGAAACATAATGTAAA----T--CAGGCAGTGCTGGTTTTGT-CATGGCCTAG---CCCGGATGCTTTCGTGTC-AG-CCGGCACTGCTGATTTCAAACAGCTCAGA----AATCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413776 113 + 96509753 GTTCTTTCGAAAAGAAACATAATGTAAA----T--CAGGCAGTGCTGGTTTTGT-CATGGCCTAG---CCCAGATGCTTTCGTGTC-AG-CCGGCACTGCTGATTTCAAACAGCTCAGA----AATCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884751 113 - 16982598 GTTCTTTCGAAAAGAAAAATAATGTAAA----T--CAGGCAGTGCTGGTTTTGT-CATGGCCTAG---CCCAGATGCTTTCGTGTC-AG-CCGGCACTGCTGATTTCAAACAGCTCAGA----AATCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686335 113 - 3785965 GTTCTTTCGAAAAGAAAAATAATGTAAA----T--CAGGCAGTGCTGGTTTTGT-CATGGCCTAG---CCCAGATGCTTTCGTGTC-AG-CCGGCACTGCTGATTTCAAACAGCTCAGA----AATCAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 70929 113 - 179258 GTTCTTTCGAAAAGAAAAATAATGTAAA----T--CAGGCAGTGCTGGTTTTGT-CATGGCCTAG---CCCAGATGCTTTCGTGTC-AG-CCGGCACTGCTGATTTCAAACAGCTCAGA----AATCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556487 113 - 5823884 GTTCTTTCGAAACGAAAAATAATGTAAA----T--CAGGCAGTGCTGGTTTTGT-CAGGGCCTAG---CCCAGATGCTTTCGTGTC-AG-CCAGCACTGCTGATTTCAAACAGCTCAGA----AAGCGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39197 72 + 372756 GTTCGTTGGAAAAA-----TGACGTAAA----T--CAAGCAGTG----------------------------------------TC-AG-CCAGCACTGCTGATTTCAAACAGCTCAGA----AACCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276431 73 + 16356641 GTTCATTCGAAAAG-----TGACGTAAA----T--CAAGCAGTG----------------------------------------TCAAG-CCAGTACTGCTGATTTCAAACAGTTCAGA----AACCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145687 72 + 1231380 GTTCGTTCAAAAAG-----TGACGTAAA----T--CAAGCAGTG----------------------------------------TC-AG-CCGGCACTGCTGATTTCAAACAGCTCAGA----AACCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675269 72 + 11732439 GTTCGTTCGAAAAG-----TGACGTAAA----T--CAAGCAGTG----------------------------------------TC-AG-CCCGCACTGCTGATTTCAAACAGCTCAGA----AACCAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22839805 108 + 22939663 GCTCTTCTGAAAAGGA---TGATGTTAA----T--CACATGATGCTGGTTTTAT---AAGTTTTG---CTTAGGTGCTCTCATGTC-AG-CCTGCACTGCTCATCCCAAACAGCCTAGA----AATCAG i otoGar3.GL873542 C 0 I 20 s mm10.chr2 181787594 92 + 182113224 --------TAGAAGAAA--GCATGTGAATTTCT--CACACATT-----TTTTG----------------CCAGATGCCTCTACAGC-AG-CTACCACTGTCAATTTCAAAAG--TGAGAGGAGAATCAC i mm10.chr2 C 0 I 15 s canFam3.chr24 47601209 113 + 47698779 GGTCTCGGGGAAGGAAG--CAACGTAGG----TGCCCGGAGGAGCTGGCTTCAT-CGCAGCTCTG---CCCAGAGGCTTCCCAGGC-GG-CCGCCACCGCTCCTTTCAAACAGCTCAGG----AATCAG i canFam3.chr24 I 2 I 29 s dasNov3.JH569290 239225 113 - 397369 GTTCATCCAAGACGGAAA-TGACCTAAA----A--TGGCTGGCGGTAGTTTTTTTTACAGCTCTGCCTCCCACCTGCTCT----GC-AGCCCACCACTGATGGTTTCAAACAGCTCAGA----AATCAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1852641 283 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56857707 131 + 57149010 I a score=34787.000000 s hg38.chr20_KI270870v1_alt 105111 3 + 183433 TGT s panTro5.chr20 66431764 3 + 66533130 TGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106905 3 + 62195757 TGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 496141 3 - 578057 TGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019294 3 - 110113093 TGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745836 3 - 92844088 TGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413889 3 + 96509753 TGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884864 3 - 16982598 TGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686448 3 - 3785965 TGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71042 3 - 179258 TGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556600 3 - 5823884 TAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39269 3 + 372756 TGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276504 3 + 16356641 TGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145759 3 + 1231380 TGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675341 3 + 11732439 TGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857838 3 + 57149010 TGT i micMur3.chr18 I 131 C 0 s otoGar3.GL873542 22839933 3 + 22939663 TGT i otoGar3.GL873542 I 20 C 0 s mm10.chr2 181787701 1 + 182113224 T-- i mm10.chr2 I 15 C 0 s canFam3.chr24 47601351 3 + 47698779 TGT i canFam3.chr24 I 29 C 0 s dasNov3.JH569290 239338 3 - 397369 AGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1852641 283 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=307008.000000 s hg38.chr20_KI270870v1_alt 105114 19 + 183433 -------------------CCCAAGTCACCCAGCTCTT s panTro5.chr20 66431767 19 + 66533130 -------------------CCCAAGTCACCCAGCTCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106908 19 + 62195757 -------------------CCCAAGTCACCCAGCTCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 496144 19 - 578057 -------------------CCCAAGTCACCCAGCTCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019297 19 - 110113093 -------------------CCCAAGTCACCCAGCTCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745839 19 - 92844088 -------------------CCCAAGTCACCCAGCTCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413892 19 + 96509753 -------------------CCCAAGTCACCCAGCTCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884867 19 - 16982598 -------------------CCCAAGTCACCCAGCTCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686451 19 - 3785965 -------------------CCCAAGTCACCCAGCTCTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71045 19 - 179258 -------------------CCCAAGTCACCCAGCTCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556603 19 - 5823884 -------------------CCCAAGTCACCCAGCTCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39272 19 + 372756 -------------------CCCAAGTCACCCAGCTCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276507 19 + 16356641 -------------------CCCAAGTCACTCAGCTCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145762 19 + 1231380 -------------------TCCAAGTCACCCAGCTCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675344 18 + 11732439 -------------------CCCAAGTCAC-CAGCTCTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857841 19 + 57149010 -------------------CCCAAGTCACCCAGCTCTT i micMur3.chr18 C 0 I 44 s proCoq1.NW_012150197v1 1852924 19 - 2029793 -------------------CCCAAGTCATCCAGCTCTT i proCoq1.NW_012150197v1 I 283 C 0 s otoGar3.GL873542 22839936 19 + 22939663 -------------------CCCAAGTCATCCGGCTCTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787702 19 + 182113224 -------------------CACAAGTCATCCAGATCCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47601354 17 + 47698779 -------------------GCCACGTCA--CAGCTCTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 239341 38 - 397369 CCCTGCTTCCTCATTGGAATCCATGTCACCCAGCTCTT i dasNov3.JH569290 C 0 I 1 e chlSab2.chr2 90273961 2150 - 90373283 I a score=507138.000000 s hg38.chr20_KI270870v1_alt 105133 49 + 183433 ACGGGTTCATTC---TCGTATTAAAGAGCCTG-G-TTTATTTTTTCTTCGGTAG s panTro5.chr20 66431786 49 + 66533130 ACGGGTTCATTC---TCGTATTAAAGAGCCTG-G-TTTTTTTTTCCTTCGGTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106927 48 + 62195757 ACGGGTTCATTC---TCGTATTAAAGAGCCTG-G-TTT-TTTTTTCTTCGGTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 496163 49 - 578057 ACGGGTTCATTC---TCGTATTAAAGAGCCTG-G-TCTTTTTTTTCTTCAGTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019316 48 - 110113093 ATGGATTCATTC---TCATATTAAAGAGCCTG-T-TTT-TCTTTTCTTTGGTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745858 49 - 92844088 ACGGATTCATTC---TCATATTAAAGAGCCTG-T-ATTTTTTTTTCTTTGGTAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413911 49 + 96509753 ACGGATTCATTC---TCATATTAAAGAGCCTG-T-ATTTTTTTTTCTTTGGTAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884886 49 - 16982598 ACGGATTCATTC---TCATATTAAAGAGCCTG-T-ATTTTTTTTTCTTTGGTAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686470 48 - 3785965 ACGGATTCATTC---TCATATTAAAGAGCCTG-T--TTTTTTTTTCTTTGGTAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71064 50 - 179258 ACGGATTCATTC---TCATATTAAAGAGCCTG-TTTTTTTTTTTTCTTTGGTAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556622 48 - 5823884 ACGGATTCATTC---TCATATTAAAGAGCCTG-G--TTTTTTTTTCTTTGGTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39291 47 + 372756 ATGGATTCATTC---TCATATTAAAGAGCCTGTT----TTTTTTTCTTCAGTAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276526 46 + 16356641 ATGGATTCACTC---CCATATTAAAGAGCCTG-G----TTTTTTTCTTCAGTAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145781 46 + 1231380 ATGGATTCACAC---TCACATTAAAGAGCCTG-G----TTTTTTTCTTCAGTAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675362 46 + 11732439 ATGGATCCATTC---TCATATTAAAGAGCCTG-G----TTTTTTTCTTCAGTAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1852943 44 - 2029793 ACAAACTCATTC---TCATATTAAAGAGCCTG-G------TTTTCCTCCTGTAG i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22839955 44 + 22939663 ACAAACTCATTC---TCATATTAAAGAGCCTG-G------TTTTCCTCCTTTAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787721 47 + 182113224 ATGAGCGCATTTTCATCATACTAAAGAGCCTG-G------CTTCTCTCCCACAA i mm10.chr2 C 0 I 1 s canFam3.chr24 47601371 48 + 47698779 CCGGCTTCATTC---TCATATTAAAGAGCTAA-C--TTGTTTTTCCTCCTGTGG i canFam3.chr24 C 0 I 20 s dasNov3.JH569290 239380 44 - 397369 ACAAACTCATTC---TAATATTTAAGAGCCTG-A------TATTTCCTCTGCAG i dasNov3.JH569290 I 1 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56857860 44 + 57149010 I a score=1571987.000000 s hg38.chr20_KI270870v1_alt 105182 127 + 183433 TTCAGTTTT-TTTCCCTTTAAAAATCAAAGCTACACGCTCCTAAGAGAACTTCTCGCTTATTGACCAGTCAATGCAGATAAATTGCAAATGGTAAAAAGGTGCTCAGCAGAAGGAGCGGCAGAGCTGT s panTro5.chr20 66431835 123 + 66533130 TTCAG-TTT-TTTCCCTTTAAAAATCCAAGCTACACGCTCCTAAGAGAACTTCTCGCTTATTGACCAGTCAATGCAGATAAATTGCAAATGGT---AAGGTGCTCAGCAGAAGGAGCGGCAGAGCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62106975 123 + 62195757 TTCAG-TTT-TTTCCCTTTAAAAATCCAAGCTACACGCTCCTAAGAGAACTTCTCGCTTATTGACCAGTCAATGCAGATAAATTGCAAATGGT---AAGGTGCTCAGCAGAAGGAGCGGCAGAGCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 496212 123 - 578057 TTCAG-TTT-TTTCCCTTTAAAAATCAAAGCTACACGCTCCTAAGAGAACTTCTCGCTTATTGACCAGTCAATGCAGATAAATTGCCAATAGT---AAGGTGCTCAGCAGAAGGAGCGGCAGAGCTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019364 122 - 110113093 --CAGTTTT-TTTCCCTTTAAAATTCAAAGCTGCATGCACCTAAGAGAACTTCTCGCTTATTGACCAGTCAATGCAGATAAATTGCAAATGGT---AAGGTGCTCAGCAGAAGGAGCGGCAGAGCTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92745907 119 - 92844088 GTCAATTTT-TTTCCCTTTCAAAATCAAAGCTACATGCACCTAAGAGAACTTCTCGCTCATTGACCAGTCGCTGCAGATAAACTGCAGAT--------GGTGCTTGGCAGAAGGAGAGGCAGAGCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96413960 119 + 96509753 GTCAATTTT-TTTCCCTTTCAAAATCAAAGCTACATGCACCTAAGAGAACTTCTCGCTCATTGACCAGTCGCTGCAGATAAACTGCAGAT--------GGTGCTTGGCAGAAGGACAGGCAGAGCCGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16884935 119 - 16982598 GTCAATTTT-TTTCCCTTTAAAAATCAAAGCTACATGCACCTAAGAGAACTTCTCGCTTATTGACCAGTCGCTGCAGATAAACTGCAGAT--------GGTGCTTGGCAGAAGCAGAGGCAGAGCCGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686518 123 - 3785965 GTCAG-TTT-TTTCCCTTTAAAAATCAAAGCTACATGCACCTAAGAGAACTTCTCGCTTATTGACCAGTCGATGCAGATAAATTGCAAATGGT---AGGGTGCTTGGCAGAAGGAGAGGCAGAGCTGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71114 123 - 179258 GTCAG-TTT-TTTCCCTTTAAAAATCAAAGCTACATGCACCTAAGAGAACTTCTCGCTTATTGACCAGTCGATGCAGATAAATTGCAAATGGT---AAGGTGCTTGGCAGAAGGAGAGGCAGAGCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556670 123 - 5823884 GTCAG-TTT-TTTCCCTTTAAAAATCAAAGCTACATGCACCTAAGAGAACTTCTCGCTTATTGACCAGTCAATGCAGATAAATTGCAAATGGT---AAGGTGCTCAGCAGAAGGAGAGGCAGAGCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39338 121 + 372756 TTCA--TTT-TTTCCCTTTAAAAATAAAAGCTACATGCACCTAAGAGAAATTCTCGCTTATTGACCAGTCAATGCAGATAAATTGCAAAT-GT---AGGGTGCTCAGCAGAGGAAGCGGCAGAGCTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276572 122 + 16356641 TTCAG-TTT-TTTCCCTTTAAAAATCAAAGCTACGTGCACCTAAGAGAAATTCTCGCTTATTGACCAGTCAATGCAGATAAATTGCAAAT-GT---AAGGTGCTCTGCAGAGGAAGCGGCAGAGCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145827 122 + 1231380 TTCAG-TTT-TTTCCCTTTAAAAATCAAAGCTACATGCACCTAAGAGAAATTCTTGCTTATTGACCAGTCAATGCAGATAAATTGCAGAT-GT---AAGGTGCTCAGCAGAGGAAGAGACAGAGCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675408 122 + 11732439 TTCAG-TTT-TTTCCCTTTAAAAATCAAAGCTACATGCACCTAAGAGAAATTCTCGCTTATTGACCAGTCAATGCAGATAAATTGCACAT-GT---AAGGTGCTCAGCAGAGGAAGTGGCTGAGCCGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56857904 124 + 57149010 TTCAGTGTT-TTCCCCTTCTAAAATCAAAGCTACATGCACCGAAGAGAACTTCTCACTTATTGACCGTTTGATGCAGATAAATTGCAAATGGA---AAGGTGCTCAGCAGAGTGAATGCCACAGCTGT i micMur3.chr18 I 44 C 0 s proCoq1.NW_012150197v1 1852988 123 - 2029793 TTCAGTTTT-TTTCCCTTTTGAAATCAAAGCTACGTGCCCCGAAGAGAACTTCTCGCTCATTGACCGTTTGATGCAGACGAACTGCAGACCG----AAGGTGCTCGGCAAAGCGAGTGCCACAGCTGT i proCoq1.NW_012150197v1 I 1 I 51 s otoGar3.GL873542 22839999 124 + 22939663 TTCAATTTTCCCCCCCTTTTAATATCAAAGCTCCATGCACCAAAGAGAACTTCTTGCTCATTGACCA-TTGATGCAGATAAATTGAGAATGGA---AAGGTGCTCAGCAAAGTGGATGCTGCAGCTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787769 121 + 182113224 TTCAG-GAG-TTTCCTTCTTAA-ATCAAAGCTATGCAAACTGAAGAGAACTTCTTGTACATTGAACACTTGATGCAAGTAAATCGGAAAGAG----AAGGTGCTCAGGACAATGAATGCCACAGCTGT i mm10.chr2 I 1 C 0 s canFam3.chr24 47601439 121 + 47698779 ttc---ttt-tttctctttTAAAATCAAAGCTACATGCACTGAAGAGAACTTCTCACTTATTGACCATTTGATGCAGATAAATTGCAAATGGA---AAGGTGCTCGGCAAACTGAATGTCACAGCTGT i canFam3.chr24 I 20 C 0 s dasNov3.JH569290 239424 120 - 397369 TCCAG--GT-GCCCCCTTTTAAAGTCAAAGCTACATGCA-TGAAGAGAACTTTGTGCTGCTTGACCATTTGATCCAGGTAAGTTGCAGATAGA---AATGTGGTTGGCAAGATAAATGCTGCAGCCG- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=794424.000000 s hg38.chr20_KI270870v1_alt 105309 54 + 183433 CAGCTTCATCAACGGGAGCTCACAGTTTTCAAGCAGTGCCCATTACACATCCCT s panTro5.chr20 66431958 54 + 66533130 CAGCTTCATCAACGGGAGCTCACAGTTTTCAAGCAGCGCCCATTACACATCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62107098 54 + 62195757 CAGCTTCATCAACGGGAGCTCACAGTTTTCAAGCAGCGCCCATTACACATCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 496335 53 - 578057 CAGCTTCATCAACGGGAGCTCACAGTTTTCAAGCAGCG-CCATTACACATCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019486 54 - 110113093 CAGCTTCATCAACGGGAGCTCACAGTTTTCAAGCAGCGCCCATTACACATCCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92746026 54 - 92844088 CAGCTTCATCAATGGGAGCTCACAGTTTTCAAGCAGCACCCATTACACATCCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96414079 54 + 96509753 CAGCTTCATCAATGGGAGCTCACAGTTTTCAAGCAGCACCCATTACACATCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16885054 54 - 16982598 CAGCTTCATCAATGGGAGCTCACAGTTTTCAAGCAGCACCCATTACACATCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686641 54 - 3785965 CAGCTTCATCAATGGGAGCTCACAGTTTTCAAGCAGCACCCATTACACATCCCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71237 54 - 179258 CAGCTTCATCAATGGGAGCTCACAGTTTTCAAGCAGCACCCATTACACATCCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556793 54 - 5823884 CAGCTTCATCAATGGGAGCTCACAGTTTTCAAGCAGCACCCATTACACATCCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39459 54 + 372756 CAGCTTCATCAATGGGAGCTCACAGTTTACAAGCAGCGCCCATTACACATCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276694 54 + 16356641 CAGCTTCATCAATGGGAGCTCACAGTTTGCAAGCAGCGCCCATTACACATCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1145949 54 + 1231380 CAGCTTCATCAATGGGAGCTCACAGTTTGCAAGCAGCGCCCATTACGCATCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675530 54 + 11732439 CAGCTTCATCAGTGGGAGCTCACAGTTTGCGAGCAGCGCCCATTACACATCCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56858028 54 + 57149010 GGGCTCCATCAATGGGCACTCACAGTCTGCGAGCGGCGCCCATTACGCATCCCT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22840123 54 + 22939663 GAGCTTCATCAATGGGCACTCACAGTTTGCAAGCAGTGCCCATTATATATCCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787890 54 + 182113224 TAGCTTCATCAATGGGAGCTCACAGTTTGCAAGCAATGCCCATTACACATCCCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47601560 54 + 47698779 TAGCTTCATCAATGGGAGCTCGTAGTTTGCAAGCAGCGCCCATTACGCATCCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 239544 37 - 397369 ----------------GACACACAGTCTGCAGGCAGCA-CCACTGCACGTCTCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1853111 51 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=1912204.000000 s hg38.chr20_KI270870v1_alt 105363 112 + 183433 GCAACCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC----a s panTro5.chr20 66432012 112 + 66533130 GCAATCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC----a i panTro5.chr20 C 0 C 0 s panPan2.chr20 62107152 112 + 62195757 GCAATCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC----a i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 496388 116 - 578057 GCAACCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCTAGCAGAACGCTTGCCAATATCCTTGGGAAAACTGGCaataa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019540 115 - 110113093 GCAACCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGACATCCAAATTGCCAAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC-AAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92746080 112 - 92844088 GCAGT-CTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCCAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC---AA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96414133 110 + 96509753 GCAGT-CTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCCAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16885108 110 - 16982598 GCAGT-CTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCCAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686695 112 - 3785965 GCAGT-CTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC---AA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71291 112 - 179258 GCAGT-CTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCTACCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC---aa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556847 112 - 5823884 GCAGT-CTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGGC---aa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39513 111 + 372756 GCAACCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCCAGGCACGCTTTAACCTAGCAGAATGCTAGCCAATATCCTTGGGAACACTGAC----- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276748 111 + 16356641 GCAACCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCCAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGAC----- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146003 111 + 1231380 GCAACCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCCAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATATCCTTGGGAAAACTGAC----- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675584 111 + 11732439 GCAACCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCCAGGCACGCTTTAACCTAGCACAACGCTTGCCAATATCCTTGGGAAAACTGAC----- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56858082 112 + 57149010 GCAACCCTCTCTATTCTCTGCTCTCTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATTTCCTTGGGAAAACTGAC---A- i micMur3.chr18 C 0 I 13 s proCoq1.NW_012150197v1 1853162 112 - 2029793 GCAACCCTCTCTATTCTCTGCTCTTCGAATAATTTATCTGCAGGAAATCCAAACTGCCAAGGCACGCTTTAACCTAGCAGAATGCTTGCCAATTTCCTCGGGAAAACTGAC---A- i proCoq1.NW_012150197v1 I 51 C 0 s otoGar3.GL873542 22840177 111 + 22939663 GCAACCCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCATGCTTTAACCTAGCAGAAGGCTTGCCAATTTCCTTGGGAAAACTGAC----- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181787944 111 + 182113224 GTAACCCTCTCTATTCTCTGCCCTTTGAATAATTTATCCACAGGAAATCCAAATTGCCAAGGCATACTTTAATCTAGCAGAATGCCTGCCAATTTCCTTGGGAAAACTGAC----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47601614 112 + 47698779 GCAACTCTCTCTATTCTCTGCTCTTTGAATAATTTATCTGCAGGAAATCCAAATTGCCAAGGCACGCTTTAACCTAGCAGAATGATTGCCAATTTCCTTGGGAAAACTGAC---a- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 239581 111 - 397369 GCAAC-CTCCTTATTCTCTGCTTTTTGAATAATTTATCTACAGGAAATCCAAATTGCCAAGGCTCGCTTTAACCTAGCAGATTGCTTGCCAGTTTCCTTGGGAAAACTGAC---A- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=45946.000000 s hg38.chr20_KI270870v1_alt 105475 21 + 183433 ataaataaataaat-aaataaa s panTro5.chr20 66432124 21 + 66533130 aaaaataaataaat-aaataaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62107264 21 + 62195757 aaaaataaataaat-aaataaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 496504 21 - 578057 ataaataaataaat-aaataaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019655 22 - 110113093 ATAAATAAATAAATAAAATAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92746192 13 - 92844088 --------AAAAAA-AAAAAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96414243 12 + 96509753 ---------AAAAA-AAAAAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16885218 13 - 16982598 --------AAAAAA-AAAAAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686807 19 - 3785965 AC--AAACAAACAA-AAAAAAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71403 15 - 179258 aa------aaaaaa-aaaaaaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556959 21 - 5823884 aaaaaaaaaaaaaa-aaaaaaa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39624 12 + 372756 ---------AAAAA-AAATAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276859 19 + 16356641 --AAAAAAAAAAAA-AAATAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146114 12 + 1231380 ---------AAAAA-AAATAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675695 12 + 11732439 ---------AAAAA-AAATAAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1853274 12 - 2029793 ---------CACAC-AAAAAAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22840288 12 + 22939663 --------ACACAT-AAAAAA- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788055 7 + 182113224 ----------ACAA-AAA---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47601726 21 + 47698779 aaaaaaaaaaaaaa-aaaaaaa i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 239692 10 - 397369 ----------AAAA-AAAAGA- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56858194 13 + 57149010 I a score=8020325.000000 s hg38.chr20_KI270870v1_alt 105496 544 + 183433 GCCGTAGATTGCATTTCAGCTGAGTGCAGGCACCGCACA------------AGTCCCATTGTACGTCCTGCATCGGAAGGCATT-----GCACACGGGCTCAGAGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTATTCACTTTAAATGTGAGCCATTTGTCCATGGGGAACCTCCGCTTTAAAAATAGAAATTGTAGTAATTGTCTTCCGT----TCTATTGGAAGGCTGTAATAAACGCACGGCTCACAGCACTGTG-CTCCACAGCCTGGAGTCGGCAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACATCATTGTATGTTAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCATCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTTCTGTAGACATTTGTCTCTTTTTCTGGCTTTCAGGAGCAAAAGCCCCATTTAAGACGTGGGGGCTTCTGAG-CCC-CCTCCTGCTGCCT-CTCTTCCTTTCTTCTGCTACTTC s panTro5.chr20 66432145 542 + 66533130 GCCATAGATTGCATTTCAGCTGAGTGCAGGCACCACACA------------AGTCCCATTGTATGTCCTGCATCGGAAGGCATT-----GCACACGGGCTCAGAGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTAAATGTGAGCCATTTGTCCATGGGGAACCTCCGCTTTAAAAATAGAAATTGTAGTAATTGTCTTCCGT----TCTATTGGAAGGCTGTAATAAACGCACGGCTCACAGCACTGTG-CTCCACAGCCTGGAGTCGGCAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACGTCATTGTATGTTAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCATCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTTCTGTAGACATTTGTCTC--TTTCTGGCTTTCAGGAGCAAAAGCCCCATTTAAGACGTGGGGGCTTCTGAG-CCC-CCTCCTGCTGCCT-CTCTTCCTTTCTTCTGATACTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62107285 542 + 62195757 GCCATAGATTGCATTTCAGCTGAGTGCAGGCACCACACA------------AGTCCCATTGTATGTCCTGCATCGGAAGGCATT-----GCACACGGGCTCAGAGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTAAATGTGAGCCATTTGTCCATGGGGAACCTCCACTTTAAAAATAGAAATTGTAGTAATTGTCTTCCGT----TCTATTGGAAGGCTGTAATAAACGCACGGCTCACAGCACTGTG-CTCCACAGCCTGGAGTCGGCAGGTTGCATCAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACATCATTGTATGTTAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCATCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTTCTGTAGACATTTGTCTC--TTTCTGGCTTTCAGGAGCAAAAGCCCCATTTAAGACGTGGGGGCTTCTGAG-CCC-CCTCCTGCTGCCT-CTCTTCCTTTCTTCTGCTACTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 496525 542 - 578057 GCCATAGATTGCATTTCAGCTGAGTGCAGGCACCACACA------------AGTCCCACTGTACGTCCTGCATCGGAAGGCATT-----GCGCACGGGCTCAGAGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTAAATGTGAGCCATTGGTCCATGGGGAACCTCCGCTTTAAAAATAGAAATTGTAGTAATTGTCTTCCGT----TCTGTTGGAAGGCTGTAATAAACGCACGGCTCACAGCACTGTG-CTCCACAGCCCGGAGTCGGCAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACATCATTGTATGTTAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCATCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTTCTGTAGACATTTGTCTC--TTTCTGGCTTTCAGGAGCAAAAGCCCCATTTAAGACGTGGGGGCTTCTGAG-CCC-CCTCCTGCTGCCT-CTCCTCCTTTCTTCTGCTACTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110019677 553 - 110113093 GCCGTAGATTGCATTTCAGCTGAGTGCAGGCACTGCGCAATCAGACGCATCAGCCCCATTGTACGTCCTGCATCGGAAGGCATT-----GCGCACGGGCTCAGAGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTC-TCACTTTAAATGTGAGCCATTGGTCCATGGGGAACCTCCGCTTTAAAAACAGAAATTGTAGTAATTGTCTTCCGT----TCTACTGGAAGGCTGTAATAAACGCACGGCTCACAGCACCGTG-CTCCACAGCCCGGAGACGACAGGTTGCTTAAATTA-C-CCAGG-TTTGATTTTTCTTCCTTAACAAATCACATACATCATTGTATGTTAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTCCATCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTACTGTAGACATTTGTCTC--TTGCTGGTTTTCAGGAACGAAAGCCCCATTTAAGACGTGGGGGCTTCTGAGCCCC-CCTCCTGCTGCCT-CTCTTCCTTTCTTCTGCTACTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92746205 554 - 92844088 GCCGTAGATTGCATTTCAGCGGAGTGCAGGCACCGCGCAATCAGACACATCGGCTCCATTGTGCGTCCTGCATCGG-AGGCATT-----GCGCACGGGCTCCGCGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTCAACGTGAGCCATTGGTCCATGGGGAACCTCTGCTTTAAAAATAGAAATTGTAGTAACTGTCTTCTGT----TCTATTGGAAGGCGGTAATAAACACACGGCCCCCAGCACTGTG-CTCCACAGCCCGGAGTCCACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACGTCATTGTATGTTAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCGTCTTACTAATTGGGGGAATTCCTTT-TTCTTCCTTC-----------CCAGGTGGTTCTGTAGACATTGGTCTC--TTGCTGGCTTTCAGGAACTAAAGCCCCATTTAAGACGTGGGGGCTTCTGAGCCCC-CCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTATTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96414255 554 + 96509753 GCCGTAGATTGCATTTCAGCGGAGTGCAGGCACCGCGCAATCAGACACATCGGCTCCATTGTGCGTCCTGCATCGG-AGGCATT-----GCGCACGGGCTCCGCGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTCAACGTGAGCCATTGGTCCATGGGGAACCTCTGCTTTAAAAATAGAAATTGTAGTAACTGTCTTCTGT----TCTATTGGAAGGCGGTAATAAACACACGGCCCCCAGCACTGTG-CTCCACAGCCCGGAGTCCACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACGTCATTGTATGTTAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCGTCTTACTAATTGGGGGAATTCCTTT-TTCTTCCTTC-----------CCAGGTGGTTCTGTAGACATTGGTCTC--TTGCTGGCTTTCAGGAACTAAAGCCCCATTTAAGACGTGGGGGCTTCTGAGCCCC-CCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTATTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16885231 554 - 16982598 GCCGTAGATTGCATTTCAGCTGAGTGCAGGCACCGCGCAATCAGACACATCAGCTCCATTGTGCGTCCTGCATCGG-AGGCATT-----GCGCAGGGGCTCCGCGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTCAACGTGAGCCATTGGTCCATGGGGAACCTCTGCTTTAAAAATAGAAATTGTAGTAACTGTCTTCTGT----TCTATTGGAAGGCGGTAATAAACACACGGCCCCCAGCACTGTG-CTCCACAGCCCGGAGTCCACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACGTCATTGTATGTCAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCGTCTTACTAATTGGGGGAATTCCTTT-TTCTTCCTTC-----------CCAGGTGGTTCTGTAGACATTGGTCTC--TTGCTGGCTTTCAGGAACTAAAGCCCCATTTAAGACGTGGGGGCTTCTGAGCCCC-CCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTATTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3686826 553 - 3785965 GCCATAGATTGCATTTCAGCTGAGTGCAGGGACCGCGCAATCAGACACGTCAGCTCCATTGTGCGTCCTGCATCGG-AGGCATC-----GCGCACGGGCTCCGCGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTCAACGTGAGCCATTGGTCCATGGGGAGCCTCTGCTTT-AAAATAGAAATTGTAGTAATTGTCTTCTGT----TCTATTGGAAGGCGGAAATAAACGCACGGCCCCCAGCACTGTG-CTCCACAGCCCGGAGTCCACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACGTCATTGTATGTTAGTACTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCGTCTTACTAATTGGGGGAATTCCTTT-TTCTTCCTTC-----------CCAGGTGGTTCTGTAGACATTGGTCTC--TTGCTGGTTTTCAGAAACTAAAGCCCCATTTAAGACGTGGGGGCTTCTGAGCCCC-CCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTATTTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71418 554 - 179258 GCCGTGGATTGCATTTCAGCTGAGTGCAGGCACCGCGCAATCAGACACATCAGCTCCATTGTGCGTCCTGCATCGG-AGGCATC-----GCGCACGGGCTCCGCGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTCAACATGAGCCATTGGTCCATGGGGAGCCTCTGCTTTAAAAATAGAAATTGTAGTAATTGTCTTCTGT----TCTATTGGAAGGCGGAAATAAACGCACGGCCCCCAGCACTGTG-CTCCACAGCCCGGAGTCCACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACGTCATTGTATGTTAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCGTCTTACTAATTGGGGGAATTCCTTT-TTCTTCCTTC-----------CCAGGTGGTTCTGTAGACATTGGTCTC--TTGCTGGTTTTCAGGAACTAAAGCCCCATTTAAGACGTGGGGGCTTCTGAGCCCC-CCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTATTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5556980 554 - 5823884 GCCGTAGATTGCATTTCAGCTGAGTGCCGGCCCCGCGCAATCAGACACATCAGCTCCATTGTGCGTCCTGCATCGG-AGGCATT-----GCGCACGGGCTCCGTGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTCAACGTGAGCCATTGGTCCGTGGGGAACCTCCGCTTTAAAAATAGAAATTGTAGTAATTGTCTTCTGT----TCTATTGGAAGGTGGTAATAAACACACGGCCCACAGCACTGTG-CTCCACAGCCTGGAGTCCACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACATCATTGTATGTTAGTGCTGCTGCATGGGGGAGGTTCAATTTGCAAATTTCATCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTACTGTAGACATTTGTCTC--TTGCTGGCTTTCAGGAACTAAAGCCCCATTTAAGACGTGGGGGCTTCTGAGCCCC-CCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTATTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 39636 553 + 372756 GCCGTAGATTGCATTTCAGCTGAGTGTGGGCACCATGCAATCAGACACATCAGCCCCATTGTGCATCCTGCAGCGGAAGGCATT-----GCGCACTGGCTCAGAGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTAAACGTGAACCATTGGTCCATGGGGAACCTCCGCTTTAAAAATAGAAATTGTAGTAATTGTCTTCTGT----TCTATTGGAAGGCTGTAATAAACGCATGGCTCAGAGCACTGTG-CTCTGCAGCCCAGAGTCGACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATATATCACTGTATGTTAGTGCTGCTGC-TTGGGGAGGTTCAATTTGCAAATTTTGTCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTACTGTAGACATTTGTCTC--TTGCTGGCTTTCAGGAACTAAAGCCCCAGTTAAGATGTAGGGGCCTCTGAG-CCC-CCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTACTTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16276878 554 + 16356641 GCCGTAGATTGCATTTCAGCTGCGTGTGGGCACCGTGCAATCAGACACATCAGCCCCATTGTGCATTCTGCAGTGGAAGGCATT-----GCGCACGGGCTCAGAGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTAAATGTGAGCCATTGGTCCATGGGGAACCTCTGCTTTAAAAATAGAAATTGTAGTAATTGTCTTCTGT----TCTATTGGAAGGCTGTAATAAACGCACGGCTCATAGCGCTGTG-CTCTGCAGCCCGGAGTCGACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATATATCACTGTATGTTAGTGCTGCTGC-TTGGGGAGGTTCAATTTGCAAATTTCGTCTTACTAATTGGGGGAATTCCTTT-TTCTGTCTTC-----------CCAGGTGGTACTGTAGACATTTGTCTC--TTGCTGGCTTTCAGGAACTAAAGCCCCATTTAAGACGTGGGGGCTTCTGAG-CCCATCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTACTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146126 551 + 1231380 GCCGTAGATTGCATTTCAGCTGAGTGTGGGCACCACGCAATCAGACACATCAGCCCCATTGTGCATCCTGCAGCGGAAGGCATT-----GCGCACGGGCTCAGAGCAGGCGACATTTGAAGGCTCATAAATGTAATGGAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTAAATGTGAGCCATTGGTCCGTGGGGAACCTCCGCTTTAAAAATAGAAATTGTAGTAATTGTCTTCTGT----CCTACTGGAAGGCTGTAATGAACGCACGGCTCATAGCGCTGTA-CTCTGCCGCCCGGAGTGGACAGGTTGCATAAATTA-C-CCAGG-GTTGATTTTTCTTCCTTAACAAATCACTTATATTACTGTGTGTTAGTGCTGCTG--TTGGGGAGGTTCAATTTGCAAATTTCGTCTTCCTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTACTGTAGACATTTGTCTC--TTGCTGGCTTTCAGGCGCTAATGCCCCATTTAAGACGTGGGGGCTTCTGAG-CCC-CCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTACTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2675707 553 + 11732439 GCCGTAGATTGCCTTTCAGCTGAGTGTGGGCACCGCGCAATCAGACACATCAGCCCCATTGTGCATCCTGCAGCGGAAGGCGTT-----GCGCACGGGCTCAGAGCAGACGACATTTGAAGGCTCATAAATGTAATGAAGTCCCCGTGACACCTGCTCCTCTCTTCACTTTAAATGTGAGCCATTGGTCCATGGGGAGCCTCCGCTTTAAAAATAGAAATTGTAGTAATTGTCTTCTGT----TCTGTTGGAAGGCTGTAATAAACGCATGGCTCGTAGCGCTGTG-CTCTGCAGCCCAGAGTCGACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATATATCACTGTATGTTAGCGCTGCTGC-TTGGGGACGTTCAATTTGCAAATTTCGTCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTACTGTAGACATTTGTCTC--TTGCTGGCTTTCAGGAACTAAAGCCCCGTTTAAGACGTGGGGGCTTCTGAG-CCC-CCTCCTGCTGCCT-CCCTTCCTTTCTTCTGCTACTTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56858207 549 + 57149010 GCCGTAGATTGCATTTCAGCTGAATGCAGGCACCCGGCAATCAGACGCATCAGCCCCATTGTGCAGCCTGCGTCGGAAGGCGCT-----GCGCATGGGCTCAGAGCAGACGACGTTTGAAGGCTCAT-AAAGTAATGAAGTCCCTGTGACACCTGCTCCTCTCTTCACTTTAAATGTGAGCCGTTGGTCCATGGGGAACCTCTGCCTTAAAAATAGAAATCATAGTAATTGTCTTCTGT----TCCTTTGGAAGGCTGTAATAAACGCACAGCTCACAGCGCTGTG-TTCCACAACCCCGAGCCGACAGGTTGCATAAATTA-C-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATACATCATTGTGTGTTAGTGCTGCCACACAGGGGAGGTTCACTTTGCAAATTTCATCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTACCACAGACATTTGTCTC--TTGCTGGCTCTTAGGGACTAAAGCCCCACTTAAGAC---AGGGCTTCTGAG--CC-CCTCCTACTGCCT-CCCCTTCTTTCTTCTGCTACTTC i micMur3.chr18 I 13 I 7 s proCoq1.NW_012150197v1 1853286 550 - 2029793 GCTGTAGATTGCATTTCAGCTGAATGCAGAAACCCGGCAATCAGATGCATCAGCCCCATTGTGCGGCCTGCATCGGAAGGCACC-----GTGCTCGGGCTCAGAGCAGACAACGTGTGAAGGCTCAT-AGTGTAATGAAGTCCCAGTGACACCTGCTCCTCTCTTCACTTTAAATGCGAGCCATTGGTCCGTGGGGAACCTCTGCCTTAAAAATGGAAATCACAGTAATTGTCTTCTGT----GCTTTTAGAAGGCCGTAATAAACGCACAGCTCACAGCACTGTG-TTCCACAGCCCAGAGTCGACAGGTTGCATAAATTA-C-CCAGGTTTCGATTTTTCCTCCTTAACAAATCACATACATCACCGTGTGTTAGTGCTGCCACACGGGGGAGGCTCACTTTGCAAATTTCATCTTACTAATTGGGGGAATTCCTTT-TTCTTTCTTC-----------CCAGGTGGTACCGTAGACATTTGTCTC--TTGCTGGCTCTTAGGGACTAAAGCCCCACTTAAGAC---GGGGCTTCCGAG-ccc-cctcctgccgcct-cccctcctttcttctactacttc i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22840300 544 + 22939663 GCTGTAGATTGCATTTCGGCTGAATGTAGGCACCCAGCAATCAGACACATCAGCCCCATTGTGTGGCCTGCATCGGAAGGCATC-----GCACACGGGCTCAGAGCAGGCAACATTTGAAGGCTAAA-AATGT-----AGTCTCTGTGACACCTGCTCCTCTCTTCACTTTAAATATGAGCCATTGGTCCATGGGGAACCCCTGCTTT-AAAATAGAACTCATAGCCATTGTCTTCTAC----TCTATTGGATCGTGATGACAAACGC-CGGCTCACAGCACTGTG--ACCATAGCCTGGACCCGACAGGTTGCATAAATTA-C-TCAGGTTTTGATTTTTGTTCCTTAACAAATCACATAAATCATTGTGTGTTAGTGCTGCCAAAAGGGGGAGGTTCACTTTGCAAGTCTTAGCTTTCTAATTGGGGGAATTCTGTT-TTCTTTCTTC-----------CCAGGTGGTATTGTAGACATTTGTCTC--TTGCTGGCTTTTAGAGATTAAAGGCCCATTTAAGATG--GGGGCTTCTGAG-CCC-CCTCCCACAACCTCCCCCTCCTTCCCTCTGCTACTTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788062 476 + 182113224 GCTATAGATTACATTTCAGCTGAACACAGGCATGGGGCAATCAGATG---------TATTGTGTGCCCTGCCTCAGAAGGCGTT-----GTGCACTGGCTCAGTGCAATCGACGTTTGAAGGCTCATAGATGTAATGACGTCCCTTTGACACCTGCTCCTCTCTTTACTTTAAGTGTGAGCCATTGGTCCACGGGGAGCCTCTGCCTTAAAAATAGAAATTATAGTAATTGTC-TCTGT----TCTATGAGAAGGCTATAATAAACACATGGCTTATGGCATTATG-CTCCATACCCTGGAGCTGACAGGTTGCATAAATTA-C-CCC-ATTTTAATTTTTCTTCTTTAACAAATTATATAGATCACTGTATGCTA-TACTGCTTCATGGAACAG--TTCACTTGTGAATTTCATC-TGCCAACTGAGGAATTAATTTTGTTTTGTTTTC-----------CTACTTGGTGAGGTAGAGGGTTGAAT---TTGCCAGTCT------------------------------------------CTT-CCTTCTGCAGCAT-A---------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47601747 527 + 47698779 GCTGTAGATTGCATTTCAGCTGAAAGCAGGCGCCCGGCAATCAGACGCATTAGCTCCATTGTGCGGCCTACGTCGGAAGGCCCT-----GCGCTTGGGCTCAGTGCAGATGACATTTGAAGGCTCATAAATGTAATGAAGTCCCTTTGACACCTGCTCCTCTCTTCACTTTAAATGTGAGTCATTGGTCCACGGGGAACCTCTGCTTTAAAAATAGAGATTATAGTAATTGTCTTCCGT----GCTATTGGAAGGCTGTAATAAACGCACAGCTCGTGACACTGTGGCTCTGCAGCCCGGGGTCGACAGGTTGCATAAATTACC-CCAGGTTTTGATTTTTCTTCCTTAACAAATCACATAAATCACTGTAGGTTAGCGCGGCC-CGTGTGGGAGGTTCACTCTGCAAATTCTGTCTTACTAATGGGGGGTGCCCTTCC-TTTCCTCTGCGGGTCGGGGTGTCAGCTCAGACCGCAGACCCTTGTCTC--TTGCGGG---------------------------------------CCGTG-GCC-CTTGCTGTGGCCC-TTCCTTCCTTTCTCTGCTCCTTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 239702 515 - 397369 GCTGTAGATTGCATTTCAGCTGAGCACAAGTGCCTGGCAATT---------AGCTCCGTGGTATGGCTTGCCTAAGAAGGCGCCAGCCAGCTCCCTGGCTCAGCGCAGC--ACATTCGAAGGCGCCTGAATGTAATGAAGCCCCTTTGACACCTGCTCCTCTCTTCACTTTCTATGTGAGCCATTGGTCCGTAGGGAACCTCTGCTTTAAAAATAGGAATTGTGGTAATAGTCTTCTGCACTATTTATTGGAAGGTGGTAATGAACGCAGGGCTCTGAGCACT-CG-CTCCATGGCCCCTAGTTGACAGGATGCATAAATTA-TGCCAGGTTTTGATTTTTCTCCTTTAACAAATCACACCAATC---GTGTGTTAGTGCTGCGGC---CGCGGGGTGCACGTGGTGAATTCCATCTTCCTGATTTGGGCAATTCCTTC-TT-------------------CCTGCTGGCACCTTGGAGACCTGCCTT--GT----GCTCTCAGGGACTGAAGCACCACTTGAGCC---AGGGCCTGCCTG-CCT-GGTCCTGCAGTCC-ATCCACC---------------- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=174382.000000 s hg38.chr20_KI270870v1_alt 106040 17 + 183433 TTTCCACTCCCCTGCTT s panTro5.chr20 66432687 17 + 66533130 TTTCCACTCCCCTGCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62107827 17 + 62195757 TTTCCACTCCCCTGCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497067 17 - 578057 TTTCCACTCCCCTGCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020230 17 - 110113093 TTTCCACTCCCCTGCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92746759 17 - 92844088 TTTCCACTCCCCTGCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96414809 17 + 96509753 TTTCCACTCCCCTGCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16885785 17 - 16982598 TTTCCACTCCCCTGCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687379 17 - 3785965 TTTCCACTCCCCTGCTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71972 17 - 179258 TTTCCACTCCCCTGCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557534 17 - 5823884 TTTCCACTCCCCTGCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40189 17 + 372756 TTCCCACACCCCTGCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277432 17 + 16356641 TTTCCACACCCCTGCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146677 17 + 1231380 TTTCCACACCCCTGCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676260 17 + 11732439 TTCCCACACCCCCGCTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1853836 8 - 2029793 ---------tcctgctg i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22840844 10 + 22939663 -------TTTCCTACTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788538 16 + 182113224 -TCCCATTCTCTTACTT i mm10.chr2 C 0 I 1 s canFam3.chr24 47602274 10 + 47698779 -------TTTCCTACTG i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 240217 10 - 397369 ------CCCTCCTGCT- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56858756 7 + 57149010 I a score=1095501.000000 s hg38.chr20_KI270870v1_alt 106057 92 + 183433 TCCCTTTGACTACCTCACGCATAGAGCCCTGGCAGCTCTGGT---GTCTGTGGCCTGGGAC---AGGTGTGGATTTGCTGCCTCCCCTTCCTGACCAC s panTro5.chr20 66432704 92 + 66533130 TCCCTTTGACTACCTCACGCATAGAGCCCTGGCAGCTCTGGT---GTCTGTGGCCTGGGAC---AGGTGTGGATTTGCTGCCTCCCCTTCCTGACCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62107844 92 + 62195757 TCCCTTTGACTACCTCACGCATAGAGCCCTGGCAGCTCTGGT---GTCTGTGGCCTGGGAC---AGGTGTGGATTTGCTGCCTCCCCTTCCTGACCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497084 92 - 578057 TCCCTTTGACTACCTCACGCATAGAGCCCTAGCAGCTCTGGT---GTCTGTGGCCTGGGAC---AGGTGTGGATTTGCTGCCTCCCCTTCCTGACCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020247 92 - 110113093 TCCCTTTGACTACCTCACGCATAGAGCCCTGGCAGCTCTGGT---GTCTGTGGCCTGGGAC---AGGTGTGGATTTGCTGCCTCCCCTTCCTGGCCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92746776 95 - 92844088 TCCCTTTGACTGCCTCACGCATAGAGCCCTGGCAGCTCTGGT---ATCTGTGACCTGGGACAGGAGGTGTGGATTTGCTGCCTCCCCTTCCTGACCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96414826 95 + 96509753 TCCCTTTGACTGCCTCACGCATAGAGCCCTGGCAGCTCTGGT---ATCTGTGACCTGGGACAGGAGGTGTGGATTTGCTGCCTCCCCTTCCTGACCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16885802 94 - 16982598 TCCCTTTGA-TGCCTCACGCATAGAGCCCTGGCAGCTCTGGT---ATCTGTGACCTGGGACAGGAGGTGTGGATTTGCTGCCTCCCCTTCCTGACCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687396 95 - 3785965 TCCCTTTGACTGCCTCACGCATAGAGCCCTGGCAGCTCTGGT---ATCTGTGACCTGGGACAGGAGGTGTGGATTTGCTGCCTCCCCTTCCTGACCGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 71989 95 - 179258 TTCCTTTGACTGCCTCACGCATAGAGCCCTGGCAGCTCTGGT---ATCTGTGACCTGGGACAGGAGGTGTGGATTTGCTGCCTCCCCTTCCTGACCGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557551 95 - 5823884 TCCCTTTGACTACCTCACACATAGAGCCCTGGCAGCTCTGGT---ATCTGTGGCCTGGGACAGGAGGTGTGGATTTGCTGCCTCCCCTTCCTGACCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40206 75 + 372756 TCCCTTTGACAACCTCGCACATGGAGCTCTTGCTGCTCTTGT---GTCTGTGGCCTGGGAC---AGGTGTGGATTTGCTGT----------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277449 92 + 16356641 TCCCTTTGACAACCTCACACATGGAGCTCTGGCTGCTCTGGT---GTCTGTGGCCTGGGAC---AGGTGTGGATTTGCTGCCTCCCCTTCCTGACCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146694 92 + 1231380 TCCCTTTGACAATTTCGCACATGGAGCTCTGGCTGCTCTGGT---GTCTGTCGCCTGGGAC---AGGTGTGGATTTGCCGCCTCCCCTTCCTGACCAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676277 91 + 11732439 TCCCTTTGACAACCTCGCAC-TGGAGCTCTGGCTGCTCTGGT---GTCTGCGGCCTGGGAC---AGGTGTGGATTTGCTGCCGCCCCTTCCTGACCAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56858763 92 + 57149010 TCCCTTTGACAGCCTCAGACACGGAGCCCGGGCCACCCTGGT---GTCTGTGGCCTGGGAC---AGGTGTGGATTTGCTGCCTCACCTTCCTGGCCAC i micMur3.chr18 I 7 I 126 s proCoq1.NW_012150197v1 1853844 92 - 2029793 cccctcTGACAGCCTCACACACGGAGCCTGGGCTGCCCTGGT---GTCTGTGGCCTGGGAC---AGGTGTGGTTTTGCCGCCTCACCTTCCTGACCAC i proCoq1.NW_012150197v1 C 0 I 82 s otoGar3.GL873542 22840854 92 + 22939663 TCCCTTTGACAGCCTCACACATGGAGCCTGGGCTGTCCTGGT---GCCTGTGGCCTGGGAC---AGGTGTGGGTTTGCTACCTCCCCTTCCTAACCAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788555 94 + 182113224 CTCCTTTCCAAACCACTCACACAGAGCTCT-GTTGTCCTGGTATAATCCATGGTCTGGGAG---AGATGTTGGTTTGCCTCCTATCTCTTCTGACTGT i mm10.chr2 I 1 C 0 s canFam3.chr24 47602287 55 + 47698779 ---------------------------------GGCTTTGGG-----CTACAGCCTGGGAC-----GGCCAGAGTAGCTCCCTCCCCTTCCCGACCAT i canFam3.chr24 I 3 I 5 s dasNov3.JH569290 240227 46 - 397369 -----------------------GTGCCCTGG--------GG---GTGGGTGCCCTGG------GGGTGCCAGCTCGCAGG-----------GACAG- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=388675.000000 s hg38.chr20_KI270870v1_alt 106149 49 + 183433 AGGTGAT-GG---TGGTGGAGTCCAGT------GCTCTC-CTCTTGGGCC-------------------TCCCCTGTCC s panTro5.chr20 66432796 49 + 66533130 AGGTGAT-GG---TGGTGGAGTCCAGT------GCTCTC-CTCTTGGGCC-------------------TCCCCTGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62107936 49 + 62195757 AGGTGAT-GG---TGGTGGAGTCCAGT------GCTCTC-CTCTTGGGCC-------------------TCCCCTGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497176 49 - 578057 AGGTGAT-GG---TGGTGGAGTCCAGC------GCTCTC-CTCTTGGGCC-------------------TCCCCTGTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020339 49 - 110113093 AGGTGAT-GG---TGGTGGAGTCCAGC------GCTCTC-CTCTTGGGCC-------------------TCCCCTGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92746871 64 - 92844088 AGGTGAT-GG---TGGTGGAGCCCAGC------ACTCTC-CTCTTGGGCCTCCTGGG----ATGGAGCATCCCCTGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96414921 64 + 96509753 AGGTGAT-GG---TGGTGGAGCCCAGC------ACTCTC-CTCTTGGGCCTCCTGGG----ATGGAGCATCCCCTGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16885896 64 - 16982598 AGGTGAT-GG---TGGTGGAGCCCAGC------ACTCTC-CTCTTGGGCCTCCTGGG----ATGGAGCATCCCCTGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687491 64 - 3785965 AGGTGGT-GG---TGGTGGAGCCCAGC------ACTCTC-CTCTTGGGCCTCCTGGG----ATGGATCATCCCCTGTCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72084 64 - 179258 AGGTGGT-GG---TGGTGGAGCCCAGC------ACTCTC-CTCTTGGGCCTCCTGGG----ATGGAACATCCCCTGTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557646 64 - 5823884 AGGTGAT-GG---TGGTGGAGCCCAGC------CCTCTC-CTCTTGGGCCTCCTGGG----ATGGAGCATCCCCTGTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40281 66 + 372756 -GGTGAT--G---TGGTGGAGTCCCGT------GCTGTC-CTCTTGGGCCTCCTGGGGTGTATGGAGCATCCCCTGTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277541 68 + 16356641 AGGTGAT-GG---TGGTGGAGTCTAGC------GCTGTC-CTCTTGGGCCTCCCGGGGTGTATGGAGCATCCCCTGTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146786 68 + 1231380 AGGTGAT-GG---TGGTGGAGTCCGGC------GTTGTC-CTCTTGGGCTTCCTGGGGTGTATGGAGCATCCCCTGTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676368 68 + 11732439 AGGTGAT-GG---TGGTGGAGTCCAGT------GCTGTC-CTCTTGGGCCTCCCGTGGTGTATGGAGCATCCCCTGTCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22840946 46 + 22939663 -GTTGACAGG---TGGTAAAGGGGGCT------GCTCCC-CTCCTGGCTCCCTAGGG---------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788649 48 + 182113224 GGAGGCA-GG---TAGTAAGTCTTAACTAGCCAGTCTTC-TGCTTGGG--------------------------TGTAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47602347 48 + 47698779 GGGTGGC-GAGCCTCGTGGGCCCTGGC----------TC-TCCTGAGGCCTCCTAGGGCT------------------- i canFam3.chr24 I 5 I 80 s dasNov3.JH569290 240273 47 - 397369 GGCTGAA-GC---TGG------CCAGT------GCCCTCGCCCCTGCGTGCAC----------------ACCCCAGCCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1853936 82 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56858855 126 + 57149010 I a score=530868.000000 s hg38.chr20_KI270870v1_alt 106198 61 + 183433 ----GGCTAGAGGTGCCCTCCCCCGCCTGGTGTGGCTCCCCGG--GAAGGATGTTTTGCA----TAGCATG--- s panTro5.chr20 66432845 61 + 66533130 ----AGCTAGAGGTGCCCTCCCTCGCCTGGTGTGGCTCCCCGG--GAAGGACGTTTTGCA----TAGCATG--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62107985 61 + 62195757 ----AGCTAGAGGTGCCCTCCCTCGCCTGGTGTGGCTCCCCGG--GAAGGATGTTTTGCA----TAGCATG--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497225 61 - 578057 ----AGCTAGAGGTGCCCTCCCCCGCCTGGTGTGGCTCCCCGG--GAAGGATGTTTTGCA----TAGCATG--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020388 61 - 110113093 ----AGATAGAGGTGCCCTCCCCGGCCTGGTGTGGCTCCCCAG--GGAGAATGTTTTGCA----TAGCATG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92746935 61 - 92844088 ----AGCTAGAGGTGCCCTCCCTGGCCTGGCGCGGCTCCCTGG--GAAGGACGTTTTGCA----TAGCATG--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96414985 61 + 96509753 ----AGCTAGAGGTGCCCTCCCTGGCCTGGCGCGGCTCCCTGG--GAAGGACGTTTTGCA----TAGCATG--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16885960 61 - 16982598 ----AGCTAGAGGTGCCCTCCCTGGCCTGGCGCGGCTCCCTGG--GAAGGACGTTTTGCA----TAGCATG--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687555 61 - 3785965 ----AGCTAGAGGTGCCCTCCCTGGCCTGGCGCGGCTCCCTGG--GAAGGACGTTTTGCA----TAGCATG--- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72148 61 - 179258 ----AGCTAGAGGTGCCCTCCCTGGCCTGGCGCGGCTCCCTGG--GAAGGACGTTTTGCA----TAGCATG--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557710 61 - 5823884 ----AGCTAGAGGTGCCCTCCCTGGCCTGGTGCGGCTCTCTGG--GAAGGATGTTTTGCA----TAGCATG--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40347 61 + 372756 ----AGCCAGAGATGGCCTCCCCGACCTGGCATAGCTCCCTGA--GAAGGATGTTTTGCA----TAGCATG--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277609 61 + 16356641 ----AGCTACAGATGCCCTCCCCCACCTGGCATAGCTCCCTGA--GAAGGATGTTTTGCA----CAGCATG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146854 61 + 1231380 ----AGCTAGAGATGCCCTCCCCAACCTGGCATAGCTCCTTGA--GAAGGATGTTTTGCA----CAGCATG--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676436 60 + 11732439 ----AGCTAGAGATGCCCTCCCC-ACCTGGCATAGCTCCCTGA--GAAGGATGTTTTGCA----TAGCATG--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22840992 56 + 22939663 -----GATAGA---ACCCTTCC---CCAGGCCTCACTCCCTGGGAGAAGATTGTTTTGCA----TAACATG--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788697 52 + 182113224 ----ACCTG-----CTCCTCTCAGTCCTGTTA----TCTGTGA--GAAGATTGTTTCCCA----CATCACA--- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 240320 70 - 397369 CACTCCCCAAGCCTGGACACCCCGGCCTGGCCC--CTCCCCTG--GAAAAGTGTCTCCCAAGCTGAGCACACTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1853936 82 - 2029793 I e canFam3.chr24 47602395 80 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56858855 126 + 57149010 I a score=77448.000000 s hg38.chr20_KI270870v1_alt 106259 12 + 183433 -----GAGTGTGTAG-----------------------------------------------------GA s panTro5.chr20 66432906 12 + 66533130 -----GAGTGTGTAG-----------------------------------------------------GA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108046 12 + 62195757 -----GAGTGTGTAG-----------------------------------------------------GA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497286 12 - 578057 -----GAGTGTGTAG-----------------------------------------------------GA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020449 12 - 110113093 -----GAGTGTGTGG-----------------------------------------------------GA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92746996 65 - 92844088 -----GAGTGGGTGGGACTTACCTGCCTGCCCAGATTTGGGACGTTTTGCATAGCATGGAGTGGGTGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415046 12 + 96509753 -----GAGTGGGTGG-----------------------------------------------------GA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886021 12 - 16982598 -----GAGTGGGTGG-----------------------------------------------------GA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687616 12 - 3785965 -----GAGTGGGTGG-----------------------------------------------------GA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72209 12 - 179258 -----GAGTGGGTGG-----------------------------------------------------GA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557771 12 - 5823884 -----GAGTGGGTGG-----------------------------------------------------GA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40408 12 + 372756 -----GAGTGTGTGA-----------------------------------------------------GA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277670 12 + 16356641 -----GAGTGTGTGG-----------------------------------------------------GA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146915 12 + 1231380 -----GAGGGTGTGG-----------------------------------------------------GA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676496 12 + 11732439 -----GAGTGTGTGG-----------------------------------------------------GA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1854018 12 - 2029793 -----GAGTGTGTGG-----------------------------------------------------GA i proCoq1.NW_012150197v1 I 82 I 1 s otoGar3.GL873542 22841048 12 + 22939663 -----AAGTACTGAG-----------------------------------------------------TA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788749 12 + 182113224 -----GAGTTTGCCA-----------------------------------------------------AC i mm10.chr2 C 0 I 2 s dasNov3.JH569290 240390 17 - 397369 GGGCCTCGTGCGCTG-----------------------------------------------------GG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47602395 80 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56858855 126 + 57149010 I a score=-2560.000000 s hg38.chr20_KI270870v1_alt 106271 1 + 183433 -T s panTro5.chr20 66432918 1 + 66533130 -T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108058 1 + 62195757 -T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497298 1 - 578057 -T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020461 1 - 110113093 -T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747061 1 - 92844088 -C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415058 1 + 96509753 -C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886033 1 - 16982598 -C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687628 1 - 3785965 -C i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72221 1 - 179258 -C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557783 1 - 5823884 -T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40420 1 + 372756 -T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277682 1 + 16356641 -T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146927 1 + 1231380 -T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676508 1 + 11732439 -T i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56858981 1 + 57149010 -T i micMur3.chr18 I 126 C 0 s proCoq1.NW_012150197v1 1854031 1 - 2029793 -T i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22841060 1 + 22939663 -T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788763 1 + 182113224 -C i mm10.chr2 I 2 C 0 s dasNov3.JH569290 240407 1 - 397369 G- i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47602395 80 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=596171.000000 s hg38.chr20_KI270870v1_alt 106272 45 + 183433 TTACTTGCCTGCCCAGATTTGTCATGAGTGACACAGGACAAGGAT s panTro5.chr20 66432919 45 + 66533130 TTACCTGCCTGCCCAGATTTGTCATGAGTGACACAGGACAAGGAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108059 45 + 62195757 TTACCTGCCTGCCCAGATTTGTCATGAGTGACACAGGACAAGGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497299 45 - 578057 TTACCTGCCTGCCCAGATTTGTCATGAGTGACACAGGACAAGGAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020462 45 - 110113093 TTACCTGCCTGCCCAGATTTGTCATGGGTGACACAGGACAAGGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747062 45 - 92844088 TTACCTGCCTGCCCAGATTTGTCATGGGTGACACAGGACGAGGAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415059 45 + 96509753 TTACCTGCCTGCCCAGATTTGTCATGGGTGACACAGGACGAGGAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886034 45 - 16982598 TTACCTGCCTGCCCAGATTTGTCATGGGTGACACAGGACGAGGAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687629 45 - 3785965 TTACCTGCCTGCCCAGATTTGTCATGGGTGACACAGGACGAGGAT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72222 45 - 179258 TTACCTGCCTGCCCAGATTTGTCATGGGTGACACAGGACGAGGAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557784 45 - 5823884 TTACCTGCCTGCCCAGATTTGTCATGGGTGACACAGGACGAGGAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40421 44 + 372756 TTATCTGCCTGCCCAGATTTGTCATG-GTGACACAGGATTGGGAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277683 44 + 16356641 TTACCTGTCTGCCCAGATTTGCCATG-GTGACACAGGACTGGGAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146928 44 + 1231380 TTACCTGTCTGCCCAGATTTGCCATG-GTGACACAGGACTGGGAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676509 38 + 11732439 TTA-CTGCCT-----GATTTGTCATG-GTGACACAGGACTGGGAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56858982 45 + 57149010 TTACCTGCCCGCCCAGATTTGTCATGGGCGACATAGGACAAGGAT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1854032 45 - 2029793 TTACCTGCCGGCCCAGATTTGTCATGGGCGACATAGGACAAGGAT i proCoq1.NW_012150197v1 C 0 I 54 s otoGar3.GL873542 22841061 34 + 22939663 ATA-----------GGATTTGTCATGGGTGACACAAGACAAGAAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788764 44 + 182113224 TTATCTGTTCCTTCAGATTTGCCATG-GTGACACAAGATGAGGAT i mm10.chr2 C 0 I 3 s canFam3.chr24 47602475 36 + 47698779 TCACCTACCTGCCCAGATTT---------GACACACGCCCACGGT i canFam3.chr24 I 80 C 0 s dasNov3.JH569290 240408 43 - 397369 --CCCTGCCTGCCCCGGTTTGTCACGGGGGCTGCCAGACGAAGGT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=80234.000000 s hg38.chr20_KI270870v1_alt 106317 8 + 183433 GCTGTGTG s panTro5.chr20 66432964 8 + 66533130 GCTGTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108104 8 + 62195757 GCTGTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497344 8 - 578057 GCTGTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020507 8 - 110113093 GCTGTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747107 8 - 92844088 TCTGTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415104 8 + 96509753 TCTGTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886079 8 - 16982598 TCTGTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687674 8 - 3785965 TCTGTGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72267 8 - 179258 TCTGTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557829 8 - 5823884 TCTGTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40465 8 + 372756 TCTGTGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277727 8 + 16356641 TCTGTGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146972 8 + 1231380 TCTGTGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676547 6 + 11732439 --TGTGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56859027 8 + 57149010 TCTATGTG i micMur3.chr18 C 0 I 45 s otoGar3.GL873542 22841095 8 + 22939663 TCTGTGTG i otoGar3.GL873542 C 0 I 29 s mm10.chr2 181788811 5 + 182113224 CCTGG--- i mm10.chr2 I 3 C 0 s canFam3.chr24 47602511 8 + 47698779 TCTATGCG i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 240451 6 - 397369 GCTGCG-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1854077 54 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=43757.000000 s hg38.chr20_KI270870v1_alt 106325 19 + 183433 ----TG--------------ACCCTCACCAC-------TGCCCC s panTro5.chr20 66432972 19 + 66533130 ----TG--------------ACCCTCACCAC-------AGCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108112 19 + 62195757 ----TG--------------ACCCTCACCAC-------AGCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497352 19 - 578057 ----TG--------------ACCCTCACCAC-------CGCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020515 19 - 110113093 ----TG--------------ACCCTCACCAC-------CACCCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747115 26 - 92844088 ----TG--------------GCCCTCACCCCCCTCGCTCCCCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415112 26 + 96509753 ----TG--------------ACCCTCGCCCCCCTCGCTCCCCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886087 26 - 16982598 ----TG--------------ACCCTCGCCCCCCTCGCTCCCCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687682 26 - 3785965 ----TG--------------ACCCTCGCCCCCCTCGCTCCCCCG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72275 26 - 179258 ----TG--------------ACCCTCGCCCCCCTCGTTCCCCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557837 25 - 5823884 ----TG--------------ACCCTTG-ACCCCTCGCCCCCCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40473 15 + 372756 ----TG--------------ATCCTCA-----------CCCCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277735 16 + 16356641 ----TG--------------ACCCTCAC----------CCCCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146980 16 + 1231380 ----TG--------------ACCCTCAC----------CCCCAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676553 16 + 11732439 ----TG--------------ACCCTCAC----------CCCCAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22841132 13 + 22939663 ----TG--------------ACCCTTGTCCC------------- i otoGar3.GL873542 I 29 I 3 s mm10.chr2 181788816 14 + 182113224 ----GG--------------ACCCTCAT----------CCTC-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47602525 27 + 47698779 ----TGCAGGCCCCGGGGACACCCCCACCCC------------- i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 240457 11 - 397369 GCGACG--------------ACCCC------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1854077 54 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859035 45 + 57149010 I a score=5024.000000 s hg38.chr20_KI270870v1_alt 106344 1 + 183433 A s panTro5.chr20 66432991 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108131 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497371 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020534 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747141 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415138 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886113 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687708 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72301 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557862 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40488 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277751 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146996 1 + 1231380 G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676569 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56859080 1 + 57149010 A i micMur3.chr18 I 45 C 0 s otoGar3.GL873542 22841148 1 + 22939663 G i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181788830 1 + 182113224 A i mm10.chr2 C 0 I 2 e proCoq1.NW_012150197v1 1854077 54 - 2029793 I e canFam3.chr24 47602552 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 240468 0 - 397369 C a score=1037121.000000 s hg38.chr20_KI270870v1_alt 106345 79 + 183433 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGACTCCCTCG----CCGGACA-ATGCTGTGGGCAGTGTCCC s panTro5.chr20 66432992 79 + 66533130 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGACTCCCTCG----CCGGACA-ATGCTGTGGGCAGCGTCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108132 79 + 62195757 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGACTCCCTCG----CCGGACA-ATGCTGTGGGCAGCGTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497372 79 - 578057 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGACTCCCTCG----CAGGACA-ATGCTGTGGGCAGTGTCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020535 79 - 110113093 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGGCTCCCTCG----CAGGACA-ATGCTGTGGGCAGCGTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747142 79 - 92844088 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGACTCCCTCG----CAGGACA-ATGCTGTGGGCAGCGTCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415139 79 + 96509753 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGACTCCCTCG----CAGGACA-ATGCTGTGGGCAGCGTCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886114 79 - 16982598 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGACTCCCTCG----CAGGACA-ATGCCGTGGGCAGCGTCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687709 79 - 3785965 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGCCTCCCTCG----CAGGACA-ATGCTGTGGGCAGCGTCCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72302 79 - 179258 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGCGCTCCCCCATGACTCCCGCG----CAGGCCA-ATGCTGTGGGCAGCGTCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557863 79 - 5823884 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCCCCATGACTCCCTCG----CAGGACA-GTGCTGTGGGCAGCATCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40489 80 + 372756 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCTTGGGGGCTCCTCCTTGACTCCCTTG----CAGGACAAATGCTGTGGGCAGCATCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277752 80 + 16356641 CATATCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGGATCCTCCTTGACTCCCTTG----CAGGACAGATGCTGTGGGCAGCATCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1146997 80 + 1231380 CATGTCCTTTCCGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCTCCTTGACTCCCTTG----CAGGACAAATGCTGTGGGCAGCATCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676570 80 + 11732439 CATGTCCTTTATGTGAT-------------TGTCA----CCCTCCTGGGGGCTCCTCGTTGACTCCCTTG----CAGGACAAATGCTGTGGGCAGCATCCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56859081 79 + 57149010 CATGTCTATTCTGTGAT-------------TGTCA----CCCTCCTGGGGAAGCGCCCTTGACTCCCTTG----CAGGACA-ATGCTGTGGGCAGCGTCCC i micMur3.chr18 C 0 I 560 s proCoq1.NW_012150197v1 1854131 79 - 2029793 CATGTCCTTTCTGTGAT-------------TGTCA----CCCTCCTGGGGAAGCTCCCCTGACTCCCTTG----CAGGACA-ATGTTGTGGGCAGCGTCCC i proCoq1.NW_012150197v1 I 54 C 0 s otoGar3.GL873542 22841149 85 + 22939663 CATGTTCTTTCTGTGAC-------------TGTCACCCTCCCTCCTGAGGAATCTCCTTTGACTCCCTTGTCATTGGAGTC-ACGC--TGGGCAGTGTCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788833 78 + 182113224 TGTGCCCTATCTGTGGC-------------TGTCA----CCTTCATAGTAGCTCTTCTGTGGTTTTTTCA----AAGTAC--ATGTTGTGGGCAGCAGCCC i mm10.chr2 I 2 C 0 s canFam3.chr24 47602552 85 + 47698779 ---GGGCTGTCTGCGACCCTTGTGCCCAGGCATCA----CCCTCCTGAGGGCCCTCCCTTGACTCCCT-A----CAGGACT-GTA---TGGACAGTGTTCC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 240468 45 - 397369 ----------------T-------------TGTTG----CCCCTCCGGG-------------------CG----CCCGGCACGTGTCTGGGGCCGAGTCCC i dasNov3.JH569290 C 0 I 5 e chlSab2.chr2 90273961 2150 - 90373283 I a score=29247.000000 s hg38.chr20_KI270870v1_alt 106424 2 + 183433 CA s panTro5.chr20 66433071 2 + 66533130 CA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108211 2 + 62195757 CA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497451 2 - 578057 CA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020614 2 - 110113093 CA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747221 2 - 92844088 CA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415218 2 + 96509753 CA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886193 2 - 16982598 CA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687788 2 - 3785965 CA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72381 2 - 179258 CA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557942 2 - 5823884 CA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40569 2 + 372756 CA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277832 2 + 16356641 CA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147077 2 + 1231380 CA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676650 2 + 11732439 CA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1854210 2 - 2029793 CA i proCoq1.NW_012150197v1 C 0 I 47 s otoGar3.GL873542 22841234 2 + 22939663 TG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788911 2 + 182113224 TA i mm10.chr2 C 0 C 0 s canFam3.chr24 47602638 2 + 47698779 CA i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 240518 2 - 397369 CA i dasNov3.JH569290 I 5 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I a score=429852.000000 s hg38.chr20_KI270870v1_alt 106426 48 + 183433 CAGAGGGTGGTCAGATTCAAGGATCACAGGTGGGGAGGGACACCGATA------- s panTro5.chr20 66433073 48 + 66533130 CAGAAGGTGGTCAGATTCAAGGATCACAGGTGGGGAGGGACACCGATA------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108213 48 + 62195757 CAGAAGGTGGTCAGATTCAAGGATCACAGGTGGGGAGGGACACCAATA------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497453 48 - 578057 CAGAGGGTGGTCAGATTCAAGGATCACAGGTGGGGAGGGACACCGATA------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020616 48 - 110113093 TAGAGGCTGGTCAGATTCAAGGATCACAGGTGGGGAGGGACACCCATG------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747223 48 - 92844088 TGGAGGCTGGTCAGATTCAGGGATCACAGGTGGGGAGGGACACCGATG------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415220 48 + 96509753 TGGAGGCTGGTCAGATTCAGGGATCACAGGTGGGGAGGGACACCGATG------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886195 48 - 16982598 TGGAGGCTGGTCAGATTCAGGGATCACAGGTGGGGAGGGACATCGATG------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687790 48 - 3785965 TGGAGGCTGGTCAGATTCAGGGATCACAGGTGGGGAGGGACACCGATG------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72383 48 - 179258 CGGAGGCTGGTCAGATTCAGGGATCACAGGTGGGGAGGGACACCGATG------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557944 48 - 5823884 TGGAGGCTGGTCAGATTCAGGGATCACAGGTGGGGAGGGACACCGATG------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40571 48 + 372756 TGGAGGCCAGTCAGACTTGGGGATCAAAGGTGGGGAGGGTCACTGATG------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277834 48 + 16356641 TGGAGGCTGGTCAGACTTGGGGATCACAGGTGGGGAGAGACACTGATG------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147079 48 + 1231380 TGGAGGCTGGTCACACTCGGGGATCACAGGTGGGGAGGGACACTGATG------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676652 48 + 11732439 TGGAGGCTGGTCAGACTCGGGGATCACAGGTGGGGAGGGACACTGATG------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22841236 47 + 22939663 TGGATGCTGGTCTGATTTGGGGAATGTAGGTATGTGAGGAC-CTGATA------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788913 34 + 182113224 TGGAGGCTTCTC--------------TAGGTGAGTCAAGATTCTAATA------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47602640 42 + 47698779 TGGAAGTTGGTCAAAGGCAGGGAAC------GTGGGGGTTCCCTGATG------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 240520 36 - 397369 CAGGAGCTTGTC-------------------GAGGCACAGCGCCTGCGCTGTCTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1854212 47 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I a score=311018.000000 s hg38.chr20_KI270870v1_alt 106474 21 + 183433 GGCTCA---GGCAAGGCAGCCAGG s panTro5.chr20 66433121 21 + 66533130 GGCTCA---GGCAAGGCAGCCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108261 21 + 62195757 GGCTCA---GGCAAGGCAGCCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497501 21 - 578057 GGCTCA---GGCAAGGCAGCCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020664 21 - 110113093 GGCTCA---GGCAAGGCAGCCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747271 21 - 92844088 GGCTCA---GGCAAGGCAGCCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415268 21 + 96509753 GGCTCA---GGCAAGGCAGCCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886243 21 - 16982598 GGCTCA---GGCAAGGCAGCCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687838 21 - 3785965 GGCTCA---GGCAAGGCAGCCAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72431 21 - 179258 GGCTCA---GGCAAGGCAGCCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5557992 21 - 5823884 GGCTCA---GGCAAGGCAGCCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40619 21 + 372756 GGCTCA---GGCAAGGCAGCCAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277882 21 + 16356641 GGCTCA---GGCAAGGCAGCCAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147127 21 + 1231380 GGCTCA---GGCAAGGCAGCCAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676700 21 + 11732439 GGCTCA---GGCAAGGCAGCCTGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1854259 21 - 2029793 GGCTCA---GGCAAGGCAGCCAGA i proCoq1.NW_012150197v1 I 47 C 0 s otoGar3.GL873542 22841283 21 + 22939663 GGCTCA---GGCAAGGTGGCCAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788947 18 + 182113224 ----CACTTGACAGGTCAG--AGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47602682 21 + 47698779 GGCTCA---GGTGGGGTGATCAGG i canFam3.chr24 C 0 I 770 s dasNov3.JH569290 240556 21 - 397369 GGCTCA---GGCGGGGCGGCCAGA i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I a score=90008.000000 s hg38.chr20_KI270870v1_alt 106495 10 + 183433 CCCTCGAGGC s panTro5.chr20 66433142 10 + 66533130 CCCTCGAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108282 10 + 62195757 CCCTCGAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497522 10 - 578057 CCCTCGAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020685 10 - 110113093 CCCTCAAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747292 10 - 92844088 CCCTTGAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415289 10 + 96509753 CCCTTGAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886264 10 - 16982598 CCCTTGAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687859 10 - 3785965 CCCTTGAGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72452 10 - 179258 CCCTTGAGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558013 10 - 5823884 CCCTTGAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40640 10 + 372756 CCCTCTAGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277903 10 + 16356641 CCCTTGAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147148 10 + 1231380 CCCTCGAGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676721 10 + 11732439 CTCTGGAGGC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1854280 10 - 2029793 CCCCCAAGGC i proCoq1.NW_012150197v1 C 0 I 409 s otoGar3.GL873542 22841304 7 + 22939663 TCCTTGG--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788965 8 + 182113224 CC--AGAGGC i mm10.chr2 C 0 C 0 s dasNov3.JH569290 240577 10 - 397369 GGTGTGGGGT i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47602703 770 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I a score=103903.000000 s hg38.chr20_KI270870v1_alt 106505 14 + 183433 CTGGAGAACATATG-- s panTro5.chr20 66433152 14 + 66533130 CTGGAGAACATATG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108292 14 + 62195757 CTGGAGAACATATG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497532 14 - 578057 CTGGAGAACATAAG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020695 14 - 110113093 CCGGAGAACATGTG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747302 14 - 92844088 CCAGAGAACATATG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415299 14 + 96509753 CCAGAGAACATATG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886274 14 - 16982598 CCAGAGAACATATG-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687869 14 - 3785965 CCAGAGAACATATG-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72462 14 - 179258 CCAGAGAACATATG-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558023 14 - 5823884 CCAGAGAACATATG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40650 13 + 372756 C-AGAGAACATATG-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277913 13 + 16356641 C-AGAGAACATATG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147158 13 + 1231380 C-AGAGAACATATG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676731 13 + 11732439 C-AGAGAACATATG-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22841311 14 + 22939663 CCAGAGGACATGTG-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788973 12 + 182113224 -CAGAGAACACCT--- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 240587 10 - 397369 CTGG------TGTGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47602703 770 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I a score=406079.000000 s hg38.chr20_KI270870v1_alt 106519 43 + 183433 GGCTGGGGCCGCTCCAGGTTGCCTGTTTCTCACGGGATGACCC s panTro5.chr20 66433166 43 + 66533130 GGCTGGGGCCGCTCCAGGTTGCCTGTTTCTCACGGGATGGCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108306 43 + 62195757 GGCTGGGGCCGCTCCAGGTTGCCTGTTTCTCACGGGATGGCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497546 43 - 578057 GGCTGGGGCCGCTCCAGGTCGCCTGTTTCTCACGGGATGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020709 43 - 110113093 AGCTGGGGCCGCTCCAGGTTGCCTGTTTCTCACGGGATGACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747316 43 - 92844088 GGCTGGGGCCGCTCCAGGTTGCCTGTTTCTCACGGAATGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415313 43 + 96509753 GGCTGGGGCCGCTCCAGGTTGCCTGTTTCTCACGGAATGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886288 43 - 16982598 GGCTGGGGCCGCCCCAGGTTGCCTGTTTCTCACGGAGTGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687883 43 - 3785965 GGCTGGGGCCGCTCCAGGTTGCCTGTTTCTCACGGAATGACCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72476 43 - 179258 GGCTGGGGCCGCTCCAGGTTGCCTGTTTCTCACGGAATGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558037 43 - 5823884 GGCTGGGGCCGCTCCAGGTTGCCTGTTTCTCACGGAATGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40663 33 + 372756 GGCTGGGGCTGCTCCAGGCTGCCTATT----------TGCTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277926 43 + 16356641 GGCTGGGGCTGCTCCAGGCTGCCTGTTTCTCATGGGATGACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147171 43 + 1231380 GGCTGGGGCTGCTCCAGGCTGCCTGTTTCTCATGGGATGACCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676744 39 + 11732439 GGCTGG----GCTCCAGGCTGCCTGTTTCTCATGGGATGACCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22841325 27 + 22939663 GGCTGG----------------CTGTTCCTAACAAGATGACCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181788985 39 + 182113224 ---CAGTGTTGCT-CAAGCAACCAATTTTTACCCACATGACAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47603473 43 + 47698779 GGCCCAGTCCGTTCCCCTCCATCTGTTTCTAAGAGGATGATCC i canFam3.chr24 I 770 C 0 s dasNov3.JH569290 240597 41 - 397369 GGCTGGGA--GGCCTGGCCTGCCTGGCCCTGGAGCCACCACCC i dasNov3.JH569290 C 0 I 542 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I a score=13923.000000 s hg38.chr20_KI270870v1_alt 106562 1 + 183433 T s panTro5.chr20 66433209 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108349 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497589 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020752 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747359 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415356 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886331 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687926 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72519 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558080 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40696 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277969 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147214 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676783 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 I 25 s otoGar3.GL873542 22841352 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789024 1 + 182113224 T i mm10.chr2 C 0 C 0 s canFam3.chr24 47603516 1 + 47698779 T i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I a score=91220.000000 s hg38.chr20_KI270870v1_alt 106563 11 + 183433 GGTGCGTGAGG s panTro5.chr20 66433210 11 + 66533130 GGTGTGTGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108350 11 + 62195757 GGTGTGTGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497590 11 - 578057 GGTGCTTGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020753 11 - 110113093 GGTGCGTGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747360 11 - 92844088 GGTGCATGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415357 11 + 96509753 GGTGCATGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886332 11 - 16982598 GGTGCATGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687927 11 - 3785965 GGTGCGTGAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72520 11 - 179258 GGTGCGTGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558081 11 - 5823884 GGTGCGTGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40697 11 + 372756 AGTGTAGGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277970 11 + 16356641 AGTGGAGAAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147215 11 + 1231380 AGTGTAGGAGG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22841353 11 + 22939663 AGTGTGTTGGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789025 11 + 182113224 AGTATATTAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47603517 11 + 47698779 GGCGTGTGAGG i canFam3.chr24 C 0 I 35 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e aotNan1.NW_018500483v1 2676784 25 + 11732439 I a score=57960.000000 s hg38.chr20_KI270870v1_alt 106574 6 + 183433 GGCATT s panTro5.chr20 66433221 6 + 66533130 GGCATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108361 6 + 62195757 GGCATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497601 6 - 578057 GGCATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020764 6 - 110113093 GGCATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747371 6 - 92844088 GGCATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415368 6 + 96509753 GGCATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886343 6 - 16982598 GGCATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687938 6 - 3785965 GGCATT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72531 6 - 179258 GGCGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558092 6 - 5823884 GGCATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40708 6 + 372756 GGCATT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277981 6 + 16356641 GGCAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147226 6 + 1231380 GGCATT i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22841364 6 + 22939663 GGCATT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789036 6 + 182113224 AATATT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e aotNan1.NW_018500483v1 2676784 25 + 11732439 I a score=18040.000000 s hg38.chr20_KI270870v1_alt 106580 6 + 183433 AAAGCC s rheMac8.chr10 92747377 6 - 92844088 AAAGCC i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886349 6 - 16982598 AAAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687944 6 - 3785965 AAAGCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72537 6 - 179258 AAAGCC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 40714 6 + 372756 GAAGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277987 6 + 16356641 GAAGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147232 6 + 1231380 GAAGCC i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22841370 6 + 22939663 AATGCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789042 6 + 182113224 AAAACT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e colAng1.NW_012114444v1 5558098 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e panPan2.chr20 62108367 0 + 62195757 C e gorGor5.CYUI01015848v1 497607 0 - 578057 C e aotNan1.NW_018500483v1 2676784 25 + 11732439 I e panTro5.chr20 66433227 0 + 66533130 C e nomLeu3.chr13 110020770 0 - 110113093 C e macFas5.chr10 96415374 0 + 96509753 C a score=1365.000000 s hg38.chr20_KI270870v1_alt 106586 1 + 183433 T s calJac3.chrUn_GL286459 40720 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277993 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147238 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22841376 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789048 1 + 182113224 T i mm10.chr2 C 0 I 7 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e cerAty1.NW_012001373v1 3687950 0 - 3785965 C e colAng1.NW_012114444v1 5558098 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e panPan2.chr20 62108367 0 + 62195757 C e gorGor5.CYUI01015848v1 497607 0 - 578057 C e manLeu1.NW_012101652v1 72543 0 - 179258 C e macNem1.NW_012014244v1 16886355 0 - 16982598 C e aotNan1.NW_018500483v1 2676784 25 + 11732439 I e panTro5.chr20 66433227 0 + 66533130 C e nomLeu3.chr13 110020770 0 - 110113093 C e rheMac8.chr10 92747383 0 - 92844088 C e macFas5.chr10 96415374 0 + 96509753 C a score=910.000000 s hg38.chr20_KI270870v1_alt 106587 1 + 183433 T s calJac3.chrUn_GL286459 40721 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277994 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147239 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22841377 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e cerAty1.NW_012001373v1 3687950 0 - 3785965 C e colAng1.NW_012114444v1 5558098 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181789049 7 + 182113224 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e panPan2.chr20 62108367 0 + 62195757 C e gorGor5.CYUI01015848v1 497607 0 - 578057 C e manLeu1.NW_012101652v1 72543 0 - 179258 C e macNem1.NW_012014244v1 16886355 0 - 16982598 C e aotNan1.NW_018500483v1 2676784 25 + 11732439 I e panTro5.chr20 66433227 0 + 66533130 C e nomLeu3.chr13 110020770 0 - 110113093 C e rheMac8.chr10 92747383 0 - 92844088 C e macFas5.chr10 96415374 0 + 96509753 C a score=573.000000 s hg38.chr20_KI270870v1_alt 106588 12 + 183433 CTGCTGggccgg s otoGar3.GL873542 22841378 12 + 22939663 CTGCCGAGTGGG i otoGar3.GL873542 C 0 I 12 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e cerAty1.NW_012001373v1 3687950 0 - 3785965 C e colAng1.NW_012114444v1 5558098 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181789049 7 + 182113224 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e panPan2.chr20 62108367 0 + 62195757 C e gorGor5.CYUI01015848v1 497607 0 - 578057 C e manLeu1.NW_012101652v1 72543 0 - 179258 C e saiBol1.JH378156 16277995 0 + 16356641 C e macNem1.NW_012014244v1 16886355 0 - 16982598 C e cebCap1.NW_016107870v1 1147240 0 + 1231380 C e calJac3.chrUn_GL286459 40722 0 + 372756 C e aotNan1.NW_018500483v1 2676784 25 + 11732439 I e panTro5.chr20 66433227 0 + 66533130 C e nomLeu3.chr13 110020770 0 - 110113093 C e rheMac8.chr10 92747383 0 - 92844088 C e macFas5.chr10 96415374 0 + 96509753 C a score=0.000000 s hg38.chr20_KI270870v1_alt 106600 301 + 183433 gcgcggtggctcacgcctgtaatcccagcactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccgtcctggctaacacggtgaaaccccgtctctactaaaaaaatacaaaaaattagccgggcgtggtagcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaa e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e cerAty1.NW_012001373v1 3687950 0 - 3785965 C e colAng1.NW_012114444v1 5558098 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181789049 7 + 182113224 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e panPan2.chr20 62108367 0 + 62195757 C e gorGor5.CYUI01015848v1 497607 0 - 578057 C e manLeu1.NW_012101652v1 72543 0 - 179258 C e saiBol1.JH378156 16277995 0 + 16356641 C e macNem1.NW_012014244v1 16886355 0 - 16982598 C e cebCap1.NW_016107870v1 1147240 0 + 1231380 C e calJac3.chrUn_GL286459 40722 0 + 372756 C e aotNan1.NW_018500483v1 2676784 25 + 11732439 I e panTro5.chr20 66433227 0 + 66533130 C e nomLeu3.chr13 110020770 0 - 110113093 C e rheMac8.chr10 92747383 0 - 92844088 C e otoGar3.GL873542 22841390 12 + 22939663 I e macFas5.chr10 96415374 0 + 96509753 C a score=13944.000000 s hg38.chr20_KI270870v1_alt 106901 7 + 183433 aaaGCCT s panTro5.chr20 66433227 7 + 66533130 AAAGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108367 7 + 62195757 AAAGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497607 7 - 578057 AAAGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020770 7 - 110113093 AAAGCCT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96415374 7 + 96509753 AAAGCCT i macFas5.chr10 C 0 C 0 s colAng1.NW_012114444v1 5558098 7 - 5823884 AAAGCCT i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e cerAty1.NW_012001373v1 3687950 0 - 3785965 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181789049 7 + 182113224 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e manLeu1.NW_012101652v1 72543 0 - 179258 C e saiBol1.JH378156 16277995 0 + 16356641 C e macNem1.NW_012014244v1 16886355 0 - 16982598 C e cebCap1.NW_016107870v1 1147240 0 + 1231380 C e calJac3.chrUn_GL286459 40722 0 + 372756 C e aotNan1.NW_018500483v1 2676784 25 + 11732439 I e rheMac8.chr10 92747383 0 - 92844088 C e otoGar3.GL873542 22841390 12 + 22939663 I a score=9295.000000 s hg38.chr20_KI270870v1_alt 106908 2 + 183433 TC s panTro5.chr20 66433234 2 + 66533130 TC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108374 2 + 62195757 TC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497614 2 - 578057 TC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020777 2 - 110113093 TC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747383 2 - 92844088 TC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415381 1 + 96509753 -C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886355 2 - 16982598 TC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687950 2 - 3785965 TC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72543 2 - 179258 TC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558105 2 - 5823884 TC i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181789049 7 + 182113224 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e saiBol1.JH378156 16277995 0 + 16356641 C e cebCap1.NW_016107870v1 1147240 0 + 1231380 C e calJac3.chrUn_GL286459 40722 0 + 372756 C e aotNan1.NW_018500483v1 2676784 25 + 11732439 I e otoGar3.GL873542 22841390 12 + 22939663 I a score=64399.000000 s hg38.chr20_KI270870v1_alt 106910 7 + 183433 TGCTGTA s panTro5.chr20 66433236 7 + 66533130 TGCTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108376 7 + 62195757 TGCTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497616 7 - 578057 TGCTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020779 7 - 110113093 TGCTGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747385 7 - 92844088 TGCTGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415382 7 + 96509753 TGCTGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886357 7 - 16982598 TGCTGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687952 7 - 3785965 TGCTGTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72545 7 - 179258 TGCTGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558107 7 - 5823884 TGCTGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40722 7 + 372756 TGCTGTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16277995 7 + 16356641 TGCTGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147240 7 + 1231380 TGCTGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676809 7 + 11732439 TGCTGTA i aotNan1.NW_018500483v1 I 25 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181789049 7 + 182113224 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e otoGar3.GL873542 22841390 12 + 22939663 I a score=510733.000000 s hg38.chr20_KI270870v1_alt 106917 57 + 183433 GTGGGAAGAAAGGGCCCATGGGAAGCTGTGCTCTGGGGACACGTTGGGGTCAGAAGC s panTro5.chr20 66433243 57 + 66533130 GTGGGAAGAAAGGGCCCATGGGAAGCTGTGCTCTGGGGACACGTTGGGGTCAGAAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108383 57 + 62195757 GTGGGAAGAAAGGGCCCATGGGAAGCTGTGCTCTGGGGACACGTTGGGGTCAGAAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497623 57 - 578057 GTGGGAAGAAAGGGCCCATGGGAAGCTGTGCTCTGGGGACACGTTGGGGTCAGAAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020786 57 - 110113093 GTGGGAAGAAAGGGCCCATGGGAAGCTGTGCTCTGGGGACACGCTGGGGTCAGAAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747392 57 - 92844088 GTGGGAAGAAAAGGCCCATGGGAAGCTGTGCTCTAGGGACACGTTGGGGTCAGAAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415389 57 + 96509753 ATGGGAAGAAAAGGCCCATGGGAAGCTGTGCTCTAGGGACACGTTGGGGTCACAAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886364 57 - 16982598 ATGGGAAGAAAAGGCCGATGGGAAGCTGTGCTCTAGGGACACGTTGGGGTCAGAAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3687959 57 - 3785965 GTGGGAAGAAAAGGCCCATGGGAAGCTGTGCTCTAGGGACACGTTGGGGTCAGAAGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72552 57 - 179258 GTGGGAAGAAAAGCCCCATGGGAAGCTGTGCTCTAGGGACACGTTGGGGTCAGAAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558114 57 - 5823884 GTGGGAAGAAAAGGCCCATGGGAAGCTGTACTCTGGGGACACGTTGGGGTCAGAAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40729 57 + 372756 GTGGGAAGAAAGGGCCCATGGGAAGCTGTGCTCTGGGGACACGTTGAGGTCAGAAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278002 47 + 16356641 GCGGGAAGAAAGTGCCCATGGAAAGCTGTGCCCTGGG----------GGTCAGAAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147247 57 + 1231380 TCGGGAAGAAAGGGCCCACGGGAAGCTGTGCTCTGGGGACACGTTGGGGTCAGAAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2676816 57 + 11732439 GCGGGAAGAAAGGGCCCGTGGGAAGCTGTGCTCTGGGGACACGTTGGGGTCAGAAGC i aotNan1.NW_018500483v1 C 0 I 42 s mm10.chr2 181789056 46 + 182113224 GTAGGAAGACAATGTCCATGGG-AGATAGGCCCT-GGACTATATTAAG--------- i mm10.chr2 I 7 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e otoGar3.GL873542 22841390 12 + 22939663 I a score=61958.000000 s hg38.chr20_KI270870v1_alt 106974 12 + 183433 CACTG-----GACGACC s panTro5.chr20 66433300 17 + 66533130 CACTGCCGCTGGTGGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108440 17 + 62195757 CACTGCCGCTGGTGGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497680 12 - 578057 CACTG-----GATGACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020843 12 - 110113093 CATTG-----GATGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747449 12 - 92844088 CATTG-----GATGACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415446 12 + 96509753 CATTG-----GATGACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886421 12 - 16982598 CATTG-----GATGACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688016 12 - 3785965 CATTG-----GATGACC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72609 12 - 179258 CATTG-----GATGACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558171 12 - 5823884 CATTG-----GATGACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40786 12 + 372756 TGTTG-----GATGACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278049 12 + 16356641 TGCTG-----GATGACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147304 12 + 1231380 CGCTG-----GATGACC i cebCap1.NW_016107870v1 C 0 I 30 s mm10.chr2 181789102 6 + 182113224 ---TG-----GACC--- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e aotNan1.NW_018500483v1 2676873 42 + 11732439 I e otoGar3.GL873542 22841390 12 + 22939663 I a score=51031.000000 s hg38.chr20_KI270870v1_alt 106986 10 + 183433 CAGCACTGCC s panTro5.chr20 66433317 10 + 66533130 GAGCACTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108457 10 + 62195757 GAGCACTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497692 10 - 578057 CAGCACTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020855 10 - 110113093 TGGAGCTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747461 10 - 92844088 CGGCACTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415458 10 + 96509753 CGGCACTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886433 10 - 16982598 CGGCACTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688028 10 - 3785965 CGGCACTGCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72621 10 - 179258 CGGCACTGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558183 10 - 5823884 CGGCACTGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40798 9 + 372756 -TGCCCTGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278061 9 + 16356641 -CGCCCTGCC i saiBol1.JH378156 C 0 C 0 s mm10.chr2 181789108 10 + 182113224 CAGTTTCATC i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e cebCap1.NW_016107870v1 1147316 30 + 1231380 I e aotNan1.NW_018500483v1 2676873 42 + 11732439 I e otoGar3.GL873542 22841390 12 + 22939663 I a score=111289.000000 s hg38.chr20_KI270870v1_alt 106996 19 + 183433 GCTGGTGGCTGAGTCTGTG s panTro5.chr20 66433327 19 + 66533130 GCTGGTGGCTGAGTCTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108467 19 + 62195757 GCTGGTGGCTGAGTCTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497702 19 - 578057 ACTGGTGGCTAAGTCTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020865 19 - 110113093 GCTGGTGGCTGAGTTTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747471 19 - 92844088 GCTGGTGGCCGTGTCTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415468 19 + 96509753 GCTGGTGGCCGTGTCTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886443 19 - 16982598 GCTGGTGGCCGTGTCTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688038 19 - 3785965 GCTGGTGGCCGTGTCTGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72631 19 - 179258 GCTGGTGGCCGTGTCTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558193 19 - 5823884 GCTGGTGGCTATGTCTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40807 16 + 372756 AC-GGTGGCTGAG--TGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278070 16 + 16356641 AT-GGTGGCTGAG--TGTG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22841402 19 + 22939663 GCTGGTGACTATGTCTGTG i otoGar3.GL873542 I 12 C 0 s mm10.chr2 181789118 19 + 182113224 TCCACCAGTTGAATCTATG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603528 35 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e cebCap1.NW_016107870v1 1147316 30 + 1231380 I e aotNan1.NW_018500483v1 2676873 42 + 11732439 I a score=211047.000000 s hg38.chr20_KI270870v1_alt 107015 39 + 183433 GTGAGCGACCTGCCCTGATGCCTCAGCACCTGCCTGACC- s panTro5.chr20 66433346 39 + 66533130 GTGAGCGACCTGCCCTGATGCCTCAGCACCTGCCTGACC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108486 39 + 62195757 GTGAGCGACCTGCCCTGATGCCTCAGCACCTGCCTGACC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497721 39 - 578057 GTGAGCGACCTGCCCTGATGCCTCAGTGCCTGCCTGACC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020884 39 - 110113093 GTGAGCGAGCTGCCCTGATGCCTCAGCACCCTCCTGGCC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747490 39 - 92844088 GTGAGCGACCTGCCCTGATGCCTTGGCACCTGCCTGGCC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415487 39 + 96509753 GTGAGCGACCTGCCCTGATGCCTTGGCACCTGCCTGGCC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886462 39 - 16982598 GTGAGCGACCTGCCCTGGTGCCTTGGCACCTGCCTGGCC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688057 39 - 3785965 GTGAGCGACCTGCCCTGATGCCTTGGCACCTGCCTGGCC- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72650 39 - 179258 GTGAGCGACCTGCCCTGATGCCTTGGCACCTGCCTGGCC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558212 39 - 5823884 GTGAGCGACCTGCCCTGATGCCTCAGCACCTGCCTGGCC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40823 5 + 372756 GTGAG----------------------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278086 5 + 16356641 GTGAG----------------------------------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22841421 38 + 22939663 GTAGGTGA-CTGCCCTGGTGCCTTAGCATTTGCCAGACG- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789137 38 + 182113224 GTCAGCAATATGCCCTG-TACCTCAGTACCTGCCTGATA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47603563 40 + 47698779 GTGGGTGACCTGCCGTGAGGCCTGAGCGGCTGGCACCCCC i canFam3.chr24 I 35 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I e cebCap1.NW_016107870v1 1147316 30 + 1231380 I e aotNan1.NW_018500483v1 2676873 42 + 11732439 I a score=100383.000000 s hg38.chr20_KI270870v1_alt 107054 8 + 183433 AGGTGAGC s panTro5.chr20 66433385 8 + 66533130 AGGTGAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108525 8 + 62195757 AGGTGAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497760 8 - 578057 AGGTGAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020923 8 - 110113093 GGGTGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747529 8 - 92844088 AGGTGAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415526 8 + 96509753 AGGTGAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886501 8 - 16982598 AGGTGAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688096 8 - 3785965 AGGTGAGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72689 8 - 179258 AGGTGAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558251 8 - 5823884 AGGTGAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40828 8 + 372756 AGGTGAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278091 8 + 16356641 AGGTGAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147346 8 + 1231380 AGGTGGGC i cebCap1.NW_016107870v1 I 30 C 0 s aotNan1.NW_018500483v1 2676915 8 + 11732439 AGGTGAGC i aotNan1.NW_018500483v1 I 42 C 0 s otoGar3.GL873542 22841459 8 + 22939663 AGGGAAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789175 8 + 182113224 AGGTAAGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47603603 8 + 47698779 ACGTGAGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e dasNov3.JH569290 240638 542 - 397369 I a score=1032006.000000 s hg38.chr20_KI270870v1_alt 107062 122 + 183433 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCTTG-GATAACATACGGACATTCATCAGGCTTCA----GTGGCGCAGGGCCCATGCCTCAGCACTTGTTGGCAGGTGCAAACCTGG-----------GGGCAC s panTro5.chr20 66433393 122 + 66533130 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCATG-GATAACACACGGACATTCATCAGGCTTCA----GTGGGGCAGGGCCCATGCCTCAGCACTTGTTGGCAGGTGCAAACCTGG-----------GGGTAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108533 122 + 62195757 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCATG-GATAACACACGGACATTCATCAGGCTTCA----GTGGGGCAGGGCCCATGCCTCAGCACTTGTTGGCAGGTGCAAACCTGG-----------GGGTAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497768 122 - 578057 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCATG-GATAACACACGGACATTCATCAGGCTTCA----GTGGGGCAGGGCCCATGCCTCAGCACTTGTTGGCAGGTGCAAACCTGG-----------GGGCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110020931 133 - 110113093 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGGCCCTCATG-GATAAAACACGGACATTCGTCAGGCTTCA----GTGGGGCAGGGCCCACACCTCAGCACTTGTTGGCAGGTGAAAACCTGGGGGCAGTGGGAGGGCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747537 122 - 92844088 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCGTG-GATAAAACACGGACACTCATCAGGCTTCA----GTGGAGCAGGGCCCACGTCTCAGCACTTGGTGGCAGGTGCAAATCCGG-----------GGGCAG i rheMac8.chr10 C 0 I 14 s macFas5.chr10 96415534 122 + 96509753 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCGTG-GATAAAACACGGACACTCATCAGGCTTCA----GTGGAGCAGGGCCCACGTCTCAGCACTTGGTGGCAGGTGCAAATCCGG-----------GGGCAG i macFas5.chr10 C 0 I 11 s macNem1.NW_012014244v1 16886509 122 - 16982598 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCGTG-GATAAAACACGGACACTCATCAGGCTTCA----GTGGAGCAGGGCCCACGTCTCAGCACTTGGTGGCAGGTGCAAATCCGG-----------GGGCAG i macNem1.NW_012014244v1 C 0 I 11 s cerAty1.NW_012001373v1 3688104 122 - 3785965 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCCTG-GATAAAACACGGACACTCATCAGGCTTCA----GTGGAGCAGGGCCCACGTCTCAGCACTTGGTGGCAGGTGCAAATCCGG-----------GGGCAG i cerAty1.NW_012001373v1 C 0 I 11 s manLeu1.NW_012101652v1 72697 122 - 179258 AGTGGGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCATG-GATAAAACACGGACACTCATCAGGCTTCA----GTGGAGCAGGGCCCACGTCTCAGCACTTGGTGGCAGGTGCAAATCCGG-----------GGGCAG i manLeu1.NW_012101652v1 C 0 I 11 s colAng1.NW_012114444v1 5558259 121 - 5823884 AGTGGGTGCTGCTCTGT-GTCAGGCCAGGAGACCCTCATG-GATAAAACACGGACACTCATCAGGCTTCA----GTGGAGCAGGG-CCACGTCTCAGCACTTGGTGGCAGGTGCAAACCTGG-----------GGGCAG i colAng1.NW_012114444v1 C 0 I 11 s calJac3.chrUn_GL286459 40836 120 + 372756 AGTGGGTGCTGCTCTGT-GTCAGGCCAGGAGACCCTCATA-GATAAAACATGAACTTTCATAAGGCTTCG----GTGGGGCAGGGCCCATGCCTCGGCACTCGTTGGCAGGTGC--ACCCAG-----------GGGCAG i calJac3.chrUn_GL286459 C 0 I 11 s saiBol1.JH378156 16278099 120 + 16356641 GGTGAGTGCTGCTCTGT-GTCGGGCCAGGAGACCCTCATG-GATAAAACATGAACTTTCCTAAGGCTTCA----GTGGGGCAGAGCCCATGCCTCGGCACTCGTTGGCAGGTGC--GCCCAG-----------GGGCGG i saiBol1.JH378156 C 0 I 11 s cebCap1.NW_016107870v1 1147354 120 + 1231380 GGTGGGTGCTGCTCCGT-GTTGGGCCAGGAGACCCTCATG-GATAAAACACGAACTTTCCTAAGGCTTCT----GCGGGGCAGGGCCCACACTTCAGCACGCGTTGGCAGGTGC--ACCCAG-----------GGGCGG i cebCap1.NW_016107870v1 C 0 I 11 s aotNan1.NW_018500483v1 2676923 119 + 11732439 AGTGGGTGCTGCTCTGT-GTCGGGCTGGGAGACCCTCGTG-GATAAAACACGAACTTTCATCAGGCTTCA----GTGGGGCAGGGCCCACGCCTCGGCAGTCGTTGGCAGGTGC--ACCC-G-----------GGACAG i aotNan1.NW_018500483v1 C 0 I 11 s otoGar3.GL873542 22841467 109 + 22939663 AGTGAGTGTCACTCCTC-GCCTGGTCAGGGGACCCTGATGTTACAAAACACCAACATCTGTGAGGATTCA----GTGGGGGAGC-CCTGTGCTCCAGCCTTTGTTGGCATGTGTA------------------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789183 90 + 182113224 AGTGGGTGTTACTCTTT-GT---GCCAGGAGCCCCTTTTATTATGGAATACCTATGCACTCGAGGCTT---------------------------------TGTGGGCAGATAGGAAACT-G-----------GAGCAG i mm10.chr2 C 0 I 7 s canFam3.chr24 47603611 113 + 47698779 AGTGGGTGGTGCTCCTCAGCCACGCCAGGAGACCA-CGTG-CCAGAAACCCTACCACCCCTGAGGATGGAGGGGGCGGGACGGGGCTCCTGCCTGGGTTCCT--CGCCAGGTGGGAG---------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 241180 102 - 397369 GGCTGGCCCTGCTCTGC-CTCGGGCCTCGAGGGGCTCGCA-G----TGTGTGGGCTCCCAGGCAGTGGCA----ATGGGGAAGAG--TAGGGGGCAGCTTTCGTGGG--------------G-----------GGCCAG i dasNov3.JH569290 I 542 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I a score=140848.000000 s hg38.chr20_KI270870v1_alt 107184 24 + 183433 GGTGCACTGTACCCTCCTTGCCAA s panTro5.chr20 66433515 24 + 66533130 GGTGCACTGTACCCTCCTTGCCAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108655 24 + 62195757 GGTGCACTGTACCCTCCTTGCCAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497890 24 - 578057 GGTGCACTGTACCCTCCTTGCCAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021064 24 - 110113093 GGTGCACTGTACCCTCCTTGCCGA i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96415667 3 + 96509753 GGT--------------------- i macFas5.chr10 I 11 C 0 s macNem1.NW_012014244v1 16886642 24 - 16982598 GGCGCACTGTACCCTCCTTGCCAA i macNem1.NW_012014244v1 I 11 C 0 s cerAty1.NW_012001373v1 3688237 24 - 3785965 GGTGCACTGTACCCTCCTTGCCAA i cerAty1.NW_012001373v1 I 11 C 0 s manLeu1.NW_012101652v1 72830 24 - 179258 GGTGCACTGTACCCTCCTTGCCAA i manLeu1.NW_012101652v1 I 11 C 0 s colAng1.NW_012114444v1 5558391 24 - 5823884 GGTGCACTGTACCCTCCTTGCCAA i colAng1.NW_012114444v1 I 11 C 0 s calJac3.chrUn_GL286459 40967 24 + 372756 GGTGCTCTGCAGCCTCCTTGCCAA i calJac3.chrUn_GL286459 I 11 C 0 s saiBol1.JH378156 16278230 24 + 16356641 GGTGCACTGCAGCCTCCTTGCCAA i saiBol1.JH378156 I 11 C 0 s cebCap1.NW_016107870v1 1147485 24 + 1231380 GGTGCACTGCAGCCTCCTTGCCAA i cebCap1.NW_016107870v1 I 11 C 0 s aotNan1.NW_018500483v1 2677053 24 + 11732439 GGTGCACCGCAGCCTCCTTGCCAA i aotNan1.NW_018500483v1 I 11 C 0 s otoGar3.GL873542 22841576 17 + 22939663 ------CTGTAGCC-CTTTGCTGA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181789280 12 + 182113224 GGAGTGCTGTGA------------ i mm10.chr2 I 7 I 1 s dasNov3.JH569290 241282 7 - 397369 -----------------GGGCCGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e canFam3.chr24 47603724 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I e rheMac8.chr10 92747659 14 - 92844088 I a score=429241.000000 s hg38.chr20_KI270870v1_alt 107208 54 + 183433 GGCCGGGGACATGCTG-ATGGGACACT----------------TCCAAGCCTTGTAGAAGGTCCTTTCTCT s panTro5.chr20 66433539 54 + 66533130 GGGCGGGGACATGCTG-ATGGGACACT----------------TCCAAGCCTTGTAGAAGGTCCTTTCTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108679 54 + 62195757 GGGCGGGGACATGCTG-ATGGGACACT----------------TCCAAGCCTTGTAGAAGGTCCTTTCTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497914 54 - 578057 GGGCGGGGACATGCTG-ATAGGACACT----------------TCCAAGCCTTGTAGAAGGTCCTTTCTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021088 54 - 110113093 GGGCGGGGACATGCTG-ATGGGACACT----------------TCCAAGCCTTGTAGAAGGTCCTTTCTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747673 54 - 92844088 GGGCGGCGACATACTG-ATGGGACACT----------------TCCAAGCCTCGTAGAAGGTCCTTTCTCC i rheMac8.chr10 I 14 C 0 s macFas5.chr10 96415670 54 + 96509753 GGGCGGCGACATACTG-ATGGGACACT----------------TCCAAGCCTCGTAGAAGGTCCTTTCTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886666 54 - 16982598 GGGCGGCGACATACTG-ATGGGACACT----------------TCCAAGTCTCGTAGAAGGTCCTTTCTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688261 54 - 3785965 GGGCGGCGACATACTG-ATGGGACACT----------------TCCAAGTCTCGTAGAAGGTCCTTTCTCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72854 54 - 179258 GGGCGGCGACATACTG-ATGGGACACT----------------TCCGAGTCTCGTAGAAGGTCCTTTCTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558415 54 - 5823884 GGGCGGCGACATACTG-ATGGGACACT----------------TCCAAGTCTTGTAGAAGGTCCTTTCTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 40991 55 + 372756 GGGCTGGGACATGCCGAATGGGATACT----------------TCCAAGCCTAGTAGAGGGTCCTTCCTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278254 54 + 16356641 GGGCTGGGACATGCCG-ATGGGACACT----------------TCCGAGCCTAGTAGAGGGTCCTTCCTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147509 54 + 1231380 GGGCTGGGACATGCCG-ATGGGACACT----------------TCCAAGCCGAGTAGAGGGTCCTTCCTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677077 54 + 11732439 GGGCTGGGACATGTGG-ATGGGGCACT----------------TCCAAGCCTAGTAGAGGGTCCTTCTTCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22841594 45 + 22939663 GGCCAGTGCTATGCCG-GT---ACA-T----------------TTTGAGCCCAGCAGCACCTCCCT----- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181789293 50 + 182113224 ACACTAGGAGGTGTGA-ATAAGATATC----------------ATTAAGCCTGGT----GGTCTCTCCCCA i mm10.chr2 I 1 I 11 s canFam3.chr24 47603724 41 + 47698779 GGCTGGGAGCAGGCGG-CGGGAACAC----------------------ACGGGGCTGGGGGTCT------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 241289 68 - 397369 GAGCTGGGAGGTGTGG-GCTGGAAACTGAGGCCCCGGCTCTTCTGGATGCCCAGTGGCGCCTCCTCCCT-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1854290 409 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I a score=802475.000000 s hg38.chr20_KI270870v1_alt 107262 86 + 183433 ACACCCTCCCACCTGCTGCTCCTGGCC--CCAGGCCTT-----TCTTGTCCTG-TGAGCCCA-TCCTTGTCATTCTGTGCC-CAAAATCACCTTTG s panTro5.chr20 66433593 86 + 66533130 ACACCCTCCCACCTGCTGCTCCTGGCC--CCAGGCCTT-----TCTTGCCCTG-TGAGCCCA-TCCTTGTCATTCTGTGCC-CAAAATCACCTTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108733 86 + 62195757 ACACCCTCCCACCTGCTGCTCCTGGCC--CCAGGCCTT-----TCTTGTCCTG-TGAGCCCA-TCCTTGTCATTCTGTGCC-CAAAATCACCTTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 497968 86 - 578057 ACACCCTCCCACCTGCTGCTCCTGGCC--CCAGGCCTT-----TCTTGTCCTG-TGAGCCCA-TCCTTGTCATTCTGTGCC-CAAAATCACCTTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021142 86 - 110113093 GCACCCTCCCACCTGCTGCACCTGGCC--CCAGGCCTT-----TCTTGTCCTG-TGAGCCCA-TCCTTGTCATTCTGTGCC-CAAAATCACCTTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747727 75 - 92844088 ACACCCTCCCACCTGCTGCTCCTGGCC--CCAGGCCTT-----TCCTGTCTTG-TGAGCCCA-TCCTTGTTGTT------------ATCACCTTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415724 75 + 96509753 ACACCCTCCCACCTGCTGCTCCTGGCC--CCAGGCCTT-----TCCCGTCTTG-TGAGCCCA-TCCTTGTTGTT------------ATCACCTTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886720 75 - 16982598 ACACCCTCCCACCTGCTGCTCCTGGCC--CCAGGCCTT-----TCCTGTCTTG-TGAGCCCA-TCCTTGTTGTT------------ATCACCTTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688315 86 - 3785965 ACACCCTCCCACCTGCTGCTCCTGGCC--ACAGGCCTT-----TCCTGTCTTG-TGAGCCCA-TCCTTGTTGTTCTGTGCC-CAAAATCACCTTTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72908 86 - 179258 ACACCCTCCCACCTGCTGCTCCTGGCC--CCAGGCCTT-----TCCTGTCTTG-TGAGCCCA-TCCTTGTTGTTCTGTGCC-CAAAATCACCTTTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558469 86 - 5823884 ACACCCTCCCACCTGCTGCTCCTGGCC--CCAGGCCTT-----TCCTGTCTTG-GGAGTCCA-TCCTTGTCATTCTGTGCC-CAAAATCACCTTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41046 86 + 372756 ACAATGTCCTACCTGCTGCTCCTGGCC--CCAGGCCTC-----TCCTGTCCTG-TGAGCCCA-TCCGTGTCATTCTGTGCC-CCAAACCACCTTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278308 86 + 16356641 ACAGTTTCCCACCTGCTGCTCCTGGCC--CCAGGCCTC-----TCCTGTCCTT-TGAGCCCA-TCCTTGTCATTCTGTGCC-CAAAATCACCTTCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147563 86 + 1231380 ATAGTTTCCCACCTGCTGCTCCTGGCC--CCGGGCCTC-----TCCTGTCCTG-CAAGCCCA-TCCTTGTCATTCTGCGCC-CAAAATCACCTTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677131 91 + 11732439 ACAATTGCCCACCTGCTGCTCCTGACC--CCAGGCCTCTCCTGTCCTGTCCTG-TGAGCCCA-TCCTTGTCATTCTGTGCC-CAAAATCACCTTCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1854699 87 - 2029793 ACATCCTCCCACCTGCTACTCCTGGCC--TCAGCCCTC-----TCCTGTCCTG-TAAGCCCA-CCCTTCACATTCTAGGCCACAGAATTAACTTCA i proCoq1.NW_012150197v1 I 409 C 0 s otoGar3.GL873542 22841639 82 + 22939663 ATGCCGACCCAGCTGTTGCTCTTGGCC--CCAGGCCTC----------TCCTG-TGAGCCCA-TCCTAGTTATTCTGTGGCACAAAAGTACCTTTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789354 57 + 182113224 ACATTCTCCCAACT-----------------------------TGCT-TCTTT-TGGTCCCA-TTCTTGTTGTTC-------ACAGATAATCTTCC i mm10.chr2 I 11 I 4 s canFam3.chr24 47603765 69 + 47698779 ---------------CTGCTCTGGGCC--TCAGGCCTT-----CCC--CTCCG-GGAGCCCACTCCCTGCGTCTCTGT-CG-CAGACTCACTGTCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 241357 73 - 397369 GCCCTGCCCCAGCC-CTGGCCCTGGCCTTCCTGATGTT-----CCTTGTCCTGCTGGGACCA-CAGC-----TCCTGTGCC-----TTCA------ i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859160 560 + 57149010 I a score=2267874.000000 s hg38.chr20_KI270870v1_alt 107348 165 + 183433 CTGTCAAAGCTTGAGCCAGAAAATGGCCAGA-CATTCCTGATGGCTC-------------TGTACTCCAGAGGCACTG-GCTGGGTTTTCTTGTTAACGTCGTGGT---TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT s panTro5.chr20 66433679 165 + 66533130 CTGTCAAAGCTTGAGCCAGAAAATGGCCAGA-CATTCCTGATGGCTC-------------TGTACTCCAGAGGCACTG-GCTGGGTTTTCTTGTTAACGTCGTGGT---TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108819 165 + 62195757 CTGTCAAAGCTTGAGCCAGAAAATGGCTAGA-CATTCCTGATGGCTC-------------TGTACTCCAGAGGCACTG-GCTGGGTTTTCTTGTTAACGTCGTGGT---TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498054 165 - 578057 CTGTCGAAGCTTGAGCCAGAAAATGGCCAGA-CATTCCTGATGGCTC-------------TGTACTCCAGAGGCACTG-GCTGGCTTTTCTTGTTAACGTCGTGGT---TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021228 164 - 110113093 CTGTCAAAGCTTGAGCCAGAAAATGGCCAGA-CATTCCTGATGGCTC-------------TG-ACTCCAGAGGCACTG-GCTGGGTTTTCTTGTTAACATCATGGT---TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747802 166 - 92844088 CTGTCACAGCTTGAGCCAGAAAATGGACAGACCGTTCCTGATGGTTC-------------TATACTCCAGAGGCACTG-GCTGGCTTTTCTGGTTAACCTCATGGC---TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACGCGATCCAAGGCCCTGCGAGGTGAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415799 166 + 96509753 CTGTCACAGCTTGAGCCAGAAAATGGACAGACCGTTCCCGATGGTTC-------------TATACTCCGGAGGCACTG-GCTGGCTTTTCTTGTTAACCTCATGGC---TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACGCGATCCAAGGCCCTGCGAGGTGAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886795 165 - 16982598 GTGTCACAGCTTGAGCCAGAAAATGGACAGGCCGTTCCTGGTGGTTC-------------TATACTCCAGAGGCACTG-GCTGGCTTTTCTTGTTAACCTCATGGC----TTTTGCTTGCAGATGAGCTTGGAAAATGAAGACAAGCGAGCTCGCACGCGATCCAAGGCCCTGCGAGGTGAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688401 166 - 3785965 CTGTCAAAGCTTGAGCCAGAAAATGGACAGACCATTCCTGATGGTTC-------------TATACTCCAGAGGCACTG-GCTGGGTTTTCTTGTTAACCTCATGGC---TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 72994 166 - 179258 CTGTCAAAGCTTGAGCCAGAAAATGGACAGACCATTCCTGATGGTTC-------------TATACTCCAGAGGCACTG-GCTGGGTTTTCTTGTTAACCTCATGGC---TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558555 166 - 5823884 CTGTCAAAGCTTGAGCCAGAAAATGGACAGACCATTCCTGATGGTTC-------------TGTACTCCAGAGGCACTG-GCTGGGTTTTCTTGTTAACCTCATGGC---GTTTTGCTTGTAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41132 160 + 372756 CTGTCAAAGCTTGAGACAGAAAATGGCCAGA------CTGATGGTTC-------------TGTATTCCAGAGGCACTG-GCT-GGTGTTCTTGTTAACGTCACGGTT--TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278394 161 + 16356641 CTGTCAAAGCTTGAGACAGAAAATGGCCAGA------CTGATGGTTC-------------TGTATTCCAGAGGCACTG-GCTGGGTGTTTTTGTTAACATCACGGTG--TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGATAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTAAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147649 161 + 1231380 CTGTCAAAGCTTGAGACAGAAAATGGCCAGA------CTGATGGTTC-------------TGTATTCCAGAGGCACTG-GCTGGGTGTTCTTGTTAATGTCGTGGTT--TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAGCTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677222 160 + 11732439 CTGTCAAAGCTTGACACAGAAAATAGCCAGA------CTGATGGTTC-------------TGTATTCCAGAGGCACAG-GCTGGGT-TTCTTGTTAACATCCCGTTT--TTTTTGCTTGCAGATGAGCTTAGAAAATGAAGACAAGCGAACTCGCACCCGATCCAAGGCCCTGCGAGGTGAGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56859720 168 + 57149010 CTGTCAAAGCTTGAGCCAGAAAATGGCCAGA-CGTCCCTGACAGTTC-------------TGAACTTGGAAGGTGTAG-GCTGGGTTTCCTTATTGACATCACAGTTGTTTTTCGCTTGCAGATGAGCTTAGAAAATGATGACAAGCGAGCTCGCACCCGATCCAAGGCCCTCCGAGGTGAGT i micMur3.chr18 I 560 I 590 s proCoq1.NW_012150197v1 1854786 168 - 2029793 CTGTCAAAGCTTGAGCCAGAAAATGGCGAGA-CATCCCTGATGGCTC-------------TGTACTCGGAAGGTGCAG-GCTGGGTTTTCTTGTTAACATCACAGTTGTTTTTTGCTTGCAGATGAGCTTAGAAAATGATGACAAGCGAGCTCGCACCCGATCCAAGGCCCTCCGAGGTGAGT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22841721 168 + 22939663 CTGTCAAAGCTTGGGCCAGAAAATGGCCAGA-AATTTCTGATGGTTC-------------TGTGCTTGGAAGGCACTG-GCTAAGTTTTCTTATTAATATTTTGCTTGCTTTTTGTTTGCAGATGAGCTTAGAAAATGATGATAAGCGAGGTCGTACCCGATCCAAGGCTCTCCGAGGTGAGT i otoGar3.GL873542 C 0 I 26 s mm10.chr2 181789415 167 + 182113224 ATAGCAAAACTTAAGTCAGAAAATGACCCAG-TGCTTCTGATGGTTT-------------ACGACACAGCAGGTGCTT-GCCCTGGGTGGTTCTTAACATTGTGCTTG-TTTTACTTTGCAGATGAGCTCAGAAAGTGATGACAAGCGAGCCCGCACACGGTCCAAGACCCTCCGAGGTCAGT i mm10.chr2 I 4 C 0 s canFam3.chr24 47603834 164 + 47698779 CCAGCAGAGCTGGAGCCAGACAGTGGCTGGA-GGTCCGGCGCAGCCC-------------TGGAG--GGGTGGCTCTGTGCTGGGTCTCC--GTGAACATCGCAGTTG-TTTTTGCTTGCAGATGAGCTTGGACAATGAGGATAAGCGGGCTCGCACGCGCTCCAAGGCCGTCCGAGGTGAGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 241430 180 - 397369 CTGTCAGAACTGCAGGCGGACAGCGTCCTCG--GCACCTGCTGGCCCCAGCTGGGCCCTATGTGTTTCAGGAGCTGGG-GGCTGATCTTCCCCTTGACATCAAAGCTGTTTACTTCTTGCAGATGAGCTTAGAGAATGAAGACAAGCGAGCTCGCACACGGTCCAAGGCTGCCCGAGGTGAGT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=100961.000000 s hg38.chr20_KI270870v1_alt 107513 16 + 183433 -----------------GCCG--------CCC---------TCCCCTCCT-- s panTro5.chr20 66433844 16 + 66533130 -----------------GCCG--------CCC---------TCCCCTCCT-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62108984 16 + 62195757 -----------------GCCG--------CCC---------TCCCCTCCT-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498219 16 - 578057 -----------------GCCG--------CCC---------TCCCCTCCT-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021392 16 - 110113093 -----------------GCCG--------CCC---------TCCCCTCCT-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747968 16 - 92844088 -----------------GCTG--------CCC---------TTACCTCCT-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415965 16 + 96509753 -----------------GCTG--------CCC---------TTACCTCCT-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886960 16 - 16982598 -----------------GCTG--------CCC---------TTACCTCCT-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688567 16 - 3785965 -----------------GCTG--------CCT---------TTACCTCCT-- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73160 16 - 179258 -----------------GCTG--------CCC---------TTACCTCCT-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558721 16 - 5823884 -----------------GCTG--------CCC---------TTACCTCCT-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41292 16 + 372756 -----------------GCTG--------CCC---------TTCCTGCCT-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278555 16 + 16356641 -----------------GCTG--------CCC---------TCCCCGCCT-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147810 16 + 1231380 -----------------GCGG--------CCC---------TCCCCGCCT-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677382 16 + 11732439 -----------------GCTG--------CCC---------TCCCTGCCT-- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1854954 16 - 2029793 -----------------ATGA--------CCC---------TCCCCTCCT-- i proCoq1.NW_012150197v1 C 0 I 103 s otoGar3.GL873542 22841915 24 + 22939663 -----------------ATGAGTCCTAGGCCC---------TCAGCTGCT-- i otoGar3.GL873542 I 26 I 7 s mm10.chr2 181789582 13 + 182113224 --------------------G--------CCA---------ATGCAGTCT-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47603998 16 + 47698779 -----------------GCCC--------CCT---------CCGTTGGCT-- i canFam3.chr24 C 0 I 12 s dasNov3.JH569290 241610 44 - 397369 CCTGCCCGTCGGGATGGGCCG--------CCCAGGCCCCGGCCACTGCCCCT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859888 590 + 57149010 I a score=583907.000000 s hg38.chr20_KI270870v1_alt 107529 80 + 183433 CCAGGGCTGTAAATGCCACTTTCCTCCG--------CGGTCTTCCT----CAGGAGCACAAACCCCTAAC----CACACATGTGCA----GAGATGC-------CCT s panTro5.chr20 66433860 80 + 66533130 CCAGGGCTGTAAATGCCACTTTCCTCCG--------CGGTCTTCCT----CAGGAGCACAAACCCCTAAC----CACACATGTGCA----GAGATGC-------CCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109000 80 + 62195757 CCAGGGCTGTAAATGCCACTTTCCTCCG--------CGGTCTTCCT----CAGGAGCACAAACCCCTAAC----CACACATGTGCA----GAGATGC-------CCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498235 80 - 578057 CCAGGGCTGTAAATGCCACTTTCCTCCG--------CGGTCTTCCT----CAGGAGCACAAACCCCTAAC----CACACAGGTGCA----GAGATGC-------CCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021408 80 - 110113093 CTGGGGCTGTAAATGCCACTTTCCTCCG--------CGGTCTTCCT----CAGGAGCACAAACCCCGAAC----CACACGTGTGCA----GAGATGC-------CCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92747984 79 - 92844088 CCAGGGCCGTAAATGCCACTTTCCTCCG--------CGGTCTTCCT----CGGGAGCACAAACTCGTAAC----CACACGTGTGCA----GAGACG--------CCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96415981 79 + 96509753 CCAGGGCCGTAAATGCCACTTTCCTCCG--------CGGTCTTCCT----CGGGAGCACAAACCCGTAAC----CACACGTGTGCA----GAGACG--------CCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16886976 79 - 16982598 CCAGGGCCATAAATGCCACTTTCCTCCG--------CGGTCTTCCT----CGGGAGCACAAACCCGTAAC----CACACGTGTGCA----GAGACG--------CCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688583 79 - 3785965 CCAGGGCCGTAAATGCCACTTTCCTCCG--------TGGTCTTCCT----CGGGAGCACAAACCCGTAAC----CACACGTGTGCA----GAGACG--------CCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73176 79 - 179258 CCAGGGCCGTAAATGCCACTTTCCTCCG--------GGGTCTTCCT----CGGGAGCACAAACCCGTAAC----CACACGTGTGCA----GAGACG--------CCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558737 79 - 5823884 CCAGGACCGTAAATGCCACTTTCCTCCG--------CGGTCTTCCT----CGGGAGCACAAACCCGTAAC----CACACGTGTGCA----GAGACA--------CCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41308 79 + 372756 CCAGGGCTGTAAATGCCACTTTCCTCTG--------CAGTCTTCCT----CGGGCGTGCAAACCCCT-AC----CACACATATGCA----GAGATGC-------CCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278571 79 + 16356641 CCGGGGCTGTAAATGCCACTTTCCTCTG--------AAGTCTTCCT----CGGGCGTGCAAACCCCT-AC----CACACATGTGCA----GAGATGC-------CCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147826 69 + 1231380 CCAGGGCTGTAAATGCCACT------------------ATCTTCCT----CGGGCGTGCAAACCCCT-AC----CACACATGTGCA----GAGGTGC-------CCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677398 79 + 11732439 CCAGGGCTGTAAACGCCACTTTCCTCTG--------CCGTCTTCCT----CGGGCGTGCAAACCCCT-AC----CACATGTGTGCA----GAGATGC-------CCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22841946 71 + 22939663 CTGACACTGTAAGTGCCACTCTCTTCAC--------CTATTCTCCCCATGCAGGGACACTGTCCTCT----------------GCA----TTGGTG--------CTT i otoGar3.GL873542 I 7 I 1 s mm10.chr2 181789595 67 + 182113224 ---GGCCTG-----GTCCCCATCCTTGG--------CAGCTGCCCT----------------CTCTAAAC----TGTTGATGTAAT----TAAATGCTCAGCTTCCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47604026 74 + 47698779 CCCAGGCCTTAAA----GCAGTCCAC-G--------CTACTTTGCT----CAGGAGAACAGA------AC----CGCTGATGAGCAGGCTGGGACGCT------CCT i canFam3.chr24 I 12 I 11 s dasNov3.JH569290 241654 92 - 397369 TGCAAGTTGTAAAGGCTGCTTCCCCTCAGCAAAGGCTCGAGCTCCC----CACATGCCTATCCTCCAAGCGCGGCACCTGCTTTCA----CGGGAGT-------CTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1854970 103 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859888 590 + 57149010 I a score=2153547.000000 s hg38.chr20_KI270870v1_alt 107609 208 + 183433 GGGGACCTCAGGCCTCTTC-AGCCTCATTCATCCTCAGGG-------CTGC-----TGAGCTTTGAAGCTGGCATCTAAGAGGGCTGCTGAGGGGCCTTT-GGCCCAGATGAACCTGCCTTGAG-GGCAGAAATGTTGAGGTAGACCCAGCTCCATGGAGTGGGAGTAGCAAGGCTCAGTTACGAGACCATTCTGTTTGGAAATGAGAGGCCGCCAGCCTTCC- s panTro5.chr20 66433940 208 + 66533130 GGGGACCTCAGGCCTCTTC-AGCCTCATTCATCCTCAGGG-------CTGC-----TGAGCTTTGAAGCTGGCATCTAAGAGGGCTGCTGAGGGGCCTTT-GGCCCAGATGAACCTGCCTTGAG-GGCAGAAATGTTGAGGTAGACCCAGCTCCATGGAGTGGGAGTAGCAAGGCTCAGTTACGAGACCATTCTGTTTGGAAATGAGAGGCCGCCAGCCTTCC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109080 208 + 62195757 GGGGACCTCAGGCCTCTTC-AGCCTCATTCATCCTCAGGG-------CTGC-----TGAGCTTTGAAGCTGGCATCTAAGAGGGCTGCTGAGGGGCCTTT-GGCCCAGATGAACCTGCCTTGAG-GGCAGAAATGTTGAGGTAGACCCAGCTCCATGGAGTGGGAGTAGCAAGGCTCAGTTACGAGACCATTCTGTTTGGAAATGAGAGGCCGCCAGCCTTCC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498315 208 - 578057 GGGGACCTCAGGCCTCTTC-AGCCTCATTCATCCTCAGGG-------CTGC-----TGAGCTTTGAAGCTGGCATCTAAGAGGGCTGCTGAGGGGCCGTT-GGCCCAGATGAACCTGCCTTGAG-GGCAGAAATGTTGAGGTAGACCCAGCTCCATGGAGTGGGAGTAGCAAGGCTCAGTTACGAGACCATTCTGTTTGGAAATGAGAGGCCGCCAGCCTTCC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021488 208 - 110113093 GAGGACCTCAGGCCTCTTC-AGCCTTGTTCATCCTCAGGG-------CTGC-----TGAGCTTTGAAGCTGGCATCTAAGAGGGCTGCCGAGGGGCCTTT-GGCCCAGATAAACCTGCCTTGAG-GGCAGAAATGTAGAGGCGGACCCAGCTCCATGGAGTGGGAGTAGCAAGGCTCAGTTACGGGACCCTTCTGTTTGGAAATGAAAGGCCGCCAGCCTTCC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748063 206 - 92844088 GGGGACCTCAGGCCTCTTC-AGCCTCGTTCATCCTCAGGG-------CTGC-----TGCGCTTTGAAGCTGGCATCTCAGAGGGCTGCTGAGGGGCCTTT-GGCCCGGATGAACCTGCCTTGAG-GGCAGAAATGTAGAGGCAGACTCAGCTCCATGGCGTGGGAGTAGCAAGGCTCAGTTATGAGACCAT--TGTTTGGAAATGAGAGGCCACCGGCCTTCC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416060 206 + 96509753 GGGGACCTCAGGCCTCTTC-AGCCTCGTTCATCCTCAGGG-------CTGC-----TGCGCTTTGAAGCTGGCATCTCAGAGGGCTGCTGAGGGGCCTTT-GGCCCGGATGAACCTGCCTTGAG-GGCAGAAATGTAGAGGCAGACTCAGCTCCATGGCGTGGGAGTAGCAAGGCTCAGTTATGAGACCAT--TGTTTGGAAATGAGAGGCCACCGGCCTTCC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887055 204 - 16982598 GGGGACCTCAGGCCTCTTC-AGCCTCGTTCATCCTCAGGG-------CTGC-----TGCGCTTTGAAGCTGGCATCTCAGAGGGCTGCTGAGGGGCCTTT-GGCCCGGATGAACCTGCCTTGAG-GGCAGAAATGTAGAGGCAGACTCAGCTCCACGGC--GGGAGTAGCAAGGCTCAGTTATGAGACCAT--TGTTTGGAAATGAGAGGCCACCAGCCTTCC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688662 206 - 3785965 GGGGACCTCAGGCCTCTTC-AGCCTCGTTCATCCTCAGGG-------CTGC-----TGCGCTTTGAAGCTGGCATCTCAGAGGGCTACTGAGGGGCCTTT-GGCCCGGATGAACCTGCCTTGAG-GGCAGAAATGTAGAGGCAGACTCAGCTCCATGGCGTGGGAGTAGCAAGGCTCAGTTATGAGACCAT--TGTTTGGAAATGAGAGGCCACCAGCCTTCC- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73255 206 - 179258 GGGGACCTCAGGCCTCTTC-AGCCTCGTTCATCCTCAGGG-------CTGC-----TGCGCTTTGAAGCTGGCATCTCAGAGGGCTGCTGAGGGGCCTTT-GGCCCGGATGAACCTGCCTTGAG-GGCAGAAATGTAGAGGCAGACTCAGCTCCATGGCGTGGGAGTAGCAAGGCTCAGTTATGAGACCAT--TGTTTGGAAATGAGAGGCCACCAGCCTTCC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5558816 208 - 5823884 GGGGACCTCAGGCCTCTTC-AGCCTCGTTCATCCTCAGGG-------CTGC-----TGCGCTTTGAAGCTGGCATCTCAGAGGGCTGCTGCGGGGCCTTT-GGCCCAGATGAACCTGCCTTGAG-GGCAGAAATGTAGAGGCAGACTCAGCTCCATGGAGTGGGAGTAGCAAGGCTCAGTTATGAGACCATTCTGTTTGGAAATGAGAGGCCACCAGCCGTCC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41387 191 + 372756 GGGGACCTTGGGCCTCTGC-AGCCTCTTTTATCCTCAGGC-------CTGC-----TGAGCTTTGAAGCTGGCATCTAAGAGGGCTGCTGAGGGGCCTTT-GCCCCAGATGAACCTGCCTT----------------GAGGCAGACCCAGCTCCACG--GTGGGAATGGCAAGGCTCAGTTAAGAGACCATTCTGTTTGGAAATGGGAGGCTGCCAACCTTTC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278650 208 + 16356641 GGGGACCTCGGGCCTCTGC-AGCCCCTTTCATCCTCAGGC-------CTGC-----TGAGCTTTGAAGCTGGCATCTGAGAGGGCTGCTGAGGGGCCTTT-GCCCCAGATGAACCTGCCTTGAG-GGCAGAAATGTAGAGGCAGACCCAGCTTCACGGAGTGGGAATGGCAAGGCTCAGTTACAAGACCATTCTGTTTGGAAATGGGAGGCTGCCAACCTTTC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1147895 208 + 1231380 GGGGACCTCGGGCCTGTGC-AGCCTCTTTCATCCTCAGGC-------CTGC-----TGAGCTTTGAAGCTGGCATCTAAGAGGGCTGCTGAGGGGCCTTT-GCCCCAGATGAACCTGCCTTGAG-GGCAGAAATGTAGAGGCAGACCCAGCTCCATGGAGTGGGAATGGCAAGGCTCAGTTACGAGACCATTCTGTTTGGAAATGAGAGGCTGCCAGCCTTTC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677477 208 + 11732439 GGGGACCTCGGGCCTCTGC-AGCCTCTTTCATCCTCAGGC-------CTGC-----TGAGCTTTGAAGCTGGCATCTGAGAGGGCTGCTGAGGGGCCTTT-GCCCCAGATGAACCTGCCTCGAG-GGCAGAAATGTAGAGGCAGACCCAGCTCCATGGAGTGGGAATGGCAAGGCTCAGTTACGAGACCATTCTGTTTGGAAATGGGAGGCTGCCAGCCTTTC- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1855073 205 - 2029793 GGGGGCCTCAGGCGTCTTC-AGCCTCTTCCACCCTCAGGG-------CTGC-----CAGGCTTTGAAGCCGGCATCCGAGCGGACTGCTGAGGGG-CTTT-GGACCAGACATACCTGC--TTGA-GGCAGAGATGTGGAGATAGACCCAGCTCCACAGAGCGGGAGGAGCAAAGCTCAGTTACGAGACCCTTCTGTTTGGAGACGAGAGGCTGCTGGCCTTCC- i proCoq1.NW_012150197v1 I 103 I 267 s otoGar3.GL873542 22842018 158 + 22939663 --GGGGCCCAGGCCTTTTC-AGCTTCTTCCATCCTCGGGGGGTAGTAGGGC-----TGGGCTTTGAAGCTGGTGTCTAAGAGGGTTGC---------------------------------TGG-GGCAGAGATGTGGGGATAGACCCAGCTCTATAG--------------AGCTCAGTT---------TTCTGTTTGGAAAGAGGAGGCCACCTGCCTTGT- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181789662 213 + 182113224 GGTAGCTTTTGGCCTATACTAGGCATCTGGGACTTTAGGG-------CTCCTCGATTGTTCCTTGATGC-AGTATTTAAG-GGTTTCCTGAAGCCCTTTTCAGCTCATACAGATTTGCTTCAGGCTGTATGAGTGTGGGGACAAGTACAGTTCCACAGAGTGGGAG-AGCAGAGTTCAGTCAGGAACCTGCTTAATTTAGAAAGGAAAGGTCCCTGGCCTTCG- i mm10.chr2 C 0 I 3 s canFam3.chr24 47604111 189 + 47698779 GGGCACTTGGGGTCCGTGG-TGTCTGGT--GGCCTCGGGC-------CTCT-----TCAGCCT-----CAGGTGCCTGAGGCGTCTGCTTTGG--------GGTCCCGACAAGCCTGCCTGGGGTGGCAACAG----GAGACAGA--CGGCTCCACCGAGTGGGGAAGGCAAAGCTCAGTCGGGAGATCTTTCTATTTGGAGTCGGAATGCTGCGAGCCCTCT- i canFam3.chr24 I 11 C 0 s dasNov3.JH569290 241746 127 - 397369 GGGGGCCTGACGCCTGTCC-AGCCCCTTCCGTCCTT--GG-------CTGC-----TGA---------CTGGGGTTT--------------GGAGGTGTT-GG----GATGGACCTG------G-GG--------------------------CGTGGGATGGGGGTG-------------------CCGTGTGCTCTGGACATG--CTGCAACCTGCTCTGCG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859888 590 + 57149010 I a score=303817.000000 s hg38.chr20_KI270870v1_alt 107817 34 + 183433 -------ACCGCCAGCC-------------CCCTTCCTTCCCAGGCGATCAGTC s panTro5.chr20 66434148 34 + 66533130 -------ACCGCCAGCC-------------CCCTTCCTTCCCAGGCGATCAGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109288 34 + 62195757 -------ACCGCCAGCC-------------CCCTTCCTTCCCAGGCGATCAGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498523 34 - 578057 -------ACCGCCAGCC-------------CCCTTCCTTCCCAGGCGATCAGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021696 34 - 110113093 -------ACCGCCATCC-------------TCCTTCCTTCCCAGGAGATCGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748269 33 - 92844088 -------ACCAGCAGCC--------------CCTTCCTTCCCAGGAGATCAGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416266 33 + 96509753 -------ACCAGCAGCC--------------CCTTCCTTCCCAGGAGATCAGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887259 33 - 16982598 -------ACCAGCAGCC--------------CCTTCCTTCCCAGGAGATCAGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688868 33 - 3785965 -------ACCAGCAGCC--------------CCTTCCTTCCCAGGAGATCAGTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73461 33 - 179258 -------ACCAGCAGCC--------------CCTTCCTTCCCAGGAGATCAGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559024 33 - 5823884 -------ACCAGCAGCC--------------CCTTCCTTCCCAGGAGATCAGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41578 34 + 372756 -------ACCACCAGCC-------------CCCATCCTTCCCAAGAGATCAGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278858 34 + 16356641 -------ACCAGCAGCC-------------CCCATCCTTCCCAAGAGATCAGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148103 34 + 1231380 -------ATCACCAGCC-------------CCCATCCTTCCTAAGGGATCAGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677685 34 + 11732439 -------ACCACCAGCC-------------CCCATCCTTCCCAAGAGATCAGTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22842176 33 + 22939663 -------GTCCCCAGCC--------------TCTCCCCTCCTAGAAAGGCAATC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789878 46 + 182113224 -------ACCACTAGCCTTTGGCCAGTGGCCCCTTTCTTTCCA-GAGATTATTG i mm10.chr2 I 3 C 0 s canFam3.chr24 47604300 34 + 47698779 -------GCCCCCAGCC-------------TCCTGCCCTCCCAGCACGCCGGTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 241873 27 - 397369 GGAGCAAGCCCCCAGCC---------------------------GCGGCCAGTC i dasNov3.JH569290 C 0 I 52 e proCoq1.NW_012150197v1 1855278 267 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859888 590 + 57149010 I a score=1235261.000000 s hg38.chr20_KI270870v1_alt 107851 139 + 183433 TTGGTGCTAATGGGGCATAGGAGGTTGTTGGGTTGAGCTGGAAGTGCAGTGGGAGGAGAGGAGGCTG-----------ACTCTGTTAGGATCTGAGCCC-----------CAACC-CCTGGCCAGA-CTTACCTCCCTGAT---------ACGGG---CGGGGG----CTTCCTCTTGT s panTro5.chr20 66434182 139 + 66533130 TTGGTGCTAATGGGGCATAGGAGGTTGTTGGGTTGAGCTGGAAGTGCAGTGGGAGGAGAGGGGGCTG-----------ACTCTGCTAGGATCTGAGCCC-----------CAGCC-CCTGGCCAGA-CTTACCTCCCTGAT---------ACAGA---CGGGGG----CTTCCTCTTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109322 139 + 62195757 TTGGTGCTAATGGGGCATAGGAGGTTGTTGGGTTGAGCTGGAAGTGCAGTGGGAGGAGAGGGGGCTG-----------ACTCTGCTAGGATCTGAGCCC-----------CAGCC-CCTGGCCAGA-CTTACCTCCCTGAT---------ACAGA---CGGGGG----CTTCCTCTTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498557 139 - 578057 TTGGTGCTAATGGGGAATAGGAGGTTGTTGGGTTGAGCTGGAAGTGCAGTGGGAGGAGAGGCGGCTG-----------ACTCTGCTAGGATCTGAGCCC-----------CAACC-CCTGGCCAGA-CTTACCTCCCTGAT---------ATGGG---CGGGGG----CTTCCTCTTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021730 150 - 110113093 TTGGTGCTGATGGGGAATAGGAGGTTGCTGGGTTGAGCTGGAAGTGCAGTGGGAGGAGAGGGGGCCGAGGCCTTGCTCACTCTGCTGGGATCTGAGCCC-----------CAACC-CCTGGCCAGA-CTTACCTCCCTGAT---------ACGGG---TGGGGG----CTTCCTGTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748302 150 - 92844088 TTGGTGCTGATGGGGAATAGGAGGTTGTTGGGTTGAACTGGAAGTGCAGTGGGAGGAGAGGGGGCCAAGGCCTTGCTCACTCTGCTAGGATCTGAGCCC-----------CAGCC-CCTGGCCAGA-CTTACCTCCCTGAT---------CCGTG---CGGGAG----CTTCCTCTTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416299 150 + 96509753 TTGGTGCTGATGGGGAATAGGAGGTTGTTGGGTTGAACTGGAAGTGCAGTGGGAGGAGAGGGGGCCAAGGCCTTGCTCACTCTGCTAGGATCTGAGCCC-----------CAGCC-CCTGGCCAGA-CTTACCTCCCTGAT---------CCGTG---CGGGAG----CTTCCTCTTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887292 150 - 16982598 TTGGTGCTGATGGGGAATAGGAGGTTGTTGGGTTGAACTGGAAGTGCAGTGGGAGGAGAGGGGGCCAAGGCCTTGCTCACTCTGCTAGGATCTGAGCCC-----------CAGCC-CCTGGCCAGA-CTTACCTCCCTGAT---------CCGTG---CGGGAG----CTTCCTCTTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3688901 150 - 3785965 TTGGTGCTGATGGGGAATAGGAGGTTGTTGGGTTGAACTGGAAGTGCAGTGGGAGGAGAGGGGGCCAAGGCCTTGCTCACTCTGCTAGGATCTGAGCCC-----------CAGCC-CCTGGCCAGA-CTTACCTCCCTGAT---------CCGTG---CGGGAG----CTTCCTCTTGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73494 150 - 179258 TTGGTGCTGATGAGGAATAGGAGGTTGTTGGGTTGAACTGGAAGTGCAGTGGGAGGAGAGGGGGCCAAGGCCTTGCTCACTCTGCTAGGATCTGAGCCC-----------CAGCC-CCTGGCCAGA-CTTACCTCCCTGAT---------CCGTG---CGGGAG----CTTCCTCTTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559057 150 - 5823884 TTGGTGCTGATGGGGAATAGGAGGTTGTTGGGTTGAGCTGGAAGTGCAGTGGGAGGAGAGGGGGCCGAGGCCTTGCTCACTCTGCTAGGATCTGAACCC-----------CAACC-CCTGGCCAGA-CTTACCTCCCTGAT---------CTGTG---CGGGAG----CTTCCTCTTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41612 156 + 372756 TTGGTGCTGATGGGGAATAGGAGGGTGTTGGGTTGAGCCAGCAGTGCAGTGGGGGGAGATGGGGCTGAGGCCTCACTCACTCTGCTAGGATCTAAGCCC-----------TAACC-CTTGGCTGGA-CTTACCTCCCTGAT---------ACATGGTTGGGGGA-GGTCTTCCTGTTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16278892 156 + 16356641 TTGGTGCTGATGGGGAATAGGAGGGTGTTGGGTTGAGCCAGCAGTGCAGTGCGGGGAGA-GGGGCTGAGGCCTCGCTCACTCTGCTAGGATCTAAGTCC-----------TAACC-CTTGGCTAGA-CTTACCTCCCTGAT---------ACATGGTTGGGGGGCTGTCTTCCTGTTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148137 155 + 1231380 TTGGTGCTGATGGGGAATAGGAGGGTGCTGGGTTGAGCCAGCGGTGCAGTGGGGGGCGG-GGGGCTGAGGCCTCGCTCACCCTGCTAGGATCTAAGCCC-----------TAACC-CTTGGCTAGA-CTTACCTCCCTGAT---------ATATGGTTGGGGGG-GCTCTTCCTGTTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677719 154 + 11732439 TCGGTGCTGATGGGGAATAGGAGGGTGTTGGGTTGAGTCAGCAGTGCGGTGCGGGGAGAGGGGGCTGAGGCCTCGCTCACTCTGCTAGGATCTGAGCCC-----------TAACC-CTTGGCTAGA-CTTACCTCCCTGAC---------ACGTGGTTGGGGGG---TCTTCCTCTTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22842209 142 + 22939663 TTGGTGCTGACAGGGATCAGGAGGCTG-TGGACTGAGTT-GCAGTGGAGTGGGAAGCAGAGGGGCTGAGGCGTTGCTCCCTCCAGCAGGACTGGAGCCC--------------CC-CTTGTTCAGT-CTCCCTTGCTTGGC---------AC------CTGGGG----CTTCCTGCTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181789924 153 + 182113224 TTGGTGCTCTTGGACATTTTAAGGCTGTTAGGTAGACTTGATAATG-GGTGGAAGG-GAGAGGATCG--GCCCTTTTCACTTTATTAAGACTGGGGCTTACCTGCTTGGTCATCC-CCTCACCCCACCCCAACTCTCTCAC-----------------TTGGAG----CTTCCAGTTGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47604334 91 + 47698779 ----------------------------------------GCAGTGGGGTGGGAGGCCAGGGAGCCAAGGCC------------------------CCC-----------TGACCGCTTGGCCAGC-CTCACCCCCTGGACCCCATGAACACATG---CGGGAC----C-----GCAAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1855278 267 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859888 590 + 57149010 I e dasNov3.JH569290 241900 52 - 397369 I a score=720680.000000 s hg38.chr20_KI270870v1_alt 107990 93 + 183433 GCCC----AA---------------------GCATCT-CAGGTGTGCCTGCCCCGGTCAGAGC---------CCCGTGCATCTTGGCAG--------CCATC----ACTGAAGGACCAGTAACTCGGTCCAGTTGTTCTC s panTro5.chr20 66434321 93 + 66533130 GCCC----AA---------------------GCATCT-CAGGTGTGCCTGCCCCGGTCAGAGC---------CCCGTGCATCTTTGCAG--------CCATC----ACTGAAGGACCAGTAACTTGGTCCAGTTGTTCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109461 93 + 62195757 GCCC----AA---------------------GCATCT-CAGGTGTGCCTGCCCCGGTCAGAGC---------CCCGTGCATCTTTGCAG--------CCATC----ACTGAAGGACCAGTAACTTGGTCCAGTTGTTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498696 93 - 578057 GCCC----AA---------------------GCATCT-CAGGTGTGCCTGCCCCGGTCAGAGC---------CCCATGCATCTTTGCAG--------CCATC----ACTGAGGGACCAGTAACTTGGTCCAGTTGTTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021880 93 - 110113093 GCCC----AA---------------------GCATCT-CAGGTATGCCTGCCCTGGTCAGAGC---------CCCGTGCATCTTTGCAG--------CCATC----ACTGAAGGACCAGTAACTTGGTCCAGTTGTTCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748452 93 - 92844088 GCCC----AA---------------------GCATCT-CAGGTGTTCCTGCCTTGGTCAGAGC---------CCCGTGCACCTTTGCAG--------CCACC----ACTGAAGGACCAGCCACTTGGTCCAGTTGTTCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416449 93 + 96509753 GCCC----AA---------------------GCATCT-CAGGTGTTCCTGCCTTAGTCAGAGC---------CCCGTGCACCTTTGCAG--------CCACC----ACTGAAGGACCAGCCACTTGGTCCAGTTGTTCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887442 93 - 16982598 GCCC----AA---------------------GCATCT-CAGGTGTTCCTGCCTTGGTCAGAGC---------CCCGTGCACCTTTGCAG--------CCACC----ACTGAAGGACCAGCCACTTGGTCCAGTTGTTCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689051 93 - 3785965 GCCC----AA---------------------GCATCT-CAGGTGTTCCTGCCTTGGTCAGAGC---------CCCGTGCACCTTTGCAG--------CCACC----ACTGAAGGACCAGCCACTTGGTCCAGTTGTTCTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73644 93 - 179258 GCCC----AA---------------------GCATCT-CAGGTGTTCCTGCCTTGGTCAGAGC---------CCCGTGCACCTTTGCAG--------CCACC----ACTGAAGGACCAGCCACTTGGTCCAGTTGTTCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559207 93 - 5823884 GCCC----AA---------------------GCATCT-CAGGTGTTCCTGCCCTGGTCAGAAC---------CCCGTGCACCTTTACAG--------CCACC----ACTGAAGGACCAGCCACTTGGTCCAGTCATTCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41768 113 + 372756 GTCC----CACGCAGTGGCCAGGAGCTCCCCGCATTT-CAGCTGTGCCTGCCT-GGTCGGTGC---------CCTGCACATCTTTGCAG--------CCGTC----ACTGAAGGACCAGCTGCTTGGTCCGGTTGTTCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279048 113 + 16356641 GTCC----CACGCAGTGGCCAGGAGCTCCCAGCATGC-CAGGTGTGCCTGCCC-GGTCAGCGC---------CCTGTACATCTTTGCAG--------CCATC----ACTGAAGGACCAGCAGCCTGGTCCAGTTGTTCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148292 113 + 1231380 GACC----CACGCAGTGGCCAGGAGCTCCCAGCATCT-CAGGTGTGCCTGCCT-GGTCAGCGC---------CCTGTACGTCTTTCCAG--------CCGTC----ACTGAAGGACCAGCCGCTTGGTCCAGTTGTTCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677873 113 + 11732439 GTCC----CACGCAGCGGCCAGGAGCTCCCAGCCTCT-CAGGTGTGCCTGCCC-TGTCAGCGC---------CCCGTACACCTTTGCAG--------CCATC----ACTGAAGGACCAGCCGCTTGGTCCAGTTGTTCTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22842351 72 + 22939663 GCCCCTGGAG---------------------GCAT--------------------------------------CCGTGCATGTTTGCAGGCAGTGCCCCATC----ACTGGCTGGCCA-----TTTGACCGTCTGTCATC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181790077 117 + 182113224 GCTT----CACAGAGTATTCAAAAGTTTTGAATATGT-AAGCGCTGCCTATTCTGGTTGGACT---------CCTGCATATCTT-GTAGTTAGTGC-CCATC----ATTG--TGACCAGCCACATC-TTTGCTGGTTCTA i mm10.chr2 C 0 I 1 s canFam3.chr24 47604425 86 + 47698779 CCCT----GA---------------------GCTTCT-CAGCTGAG-CTGCCC-AGTCGGACC---------CCAGGGCATTGTGCC----------CCGTC----ACT-AGGGCCCAGCTGAGTGGCCCATCTGTTC-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 241952 105 - 397369 TTCC----AA---------------------GCGCCTCCAGGCGACTCCCCCTCAGACTGCGCGGCAGTCCACCCGTGGCCCTCGCCGG--------TCACCTGGGACGGTGGGCCCAGCCGC--GGGCCCGTGCCTCTC i dasNov3.JH569290 I 52 C 0 e proCoq1.NW_012150197v1 1855278 267 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56859888 590 + 57149010 I a score=13923.000000 s hg38.chr20_KI270870v1_alt 108083 1 + 183433 T s panTro5.chr20 66434414 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109554 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498789 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021973 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748545 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416542 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887535 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689144 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73737 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559300 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41881 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279161 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148405 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677986 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56860478 1 + 57149010 T i micMur3.chr18 I 590 C 0 s otoGar3.GL873542 22842423 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 242057 1 - 397369 T i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1855278 267 - 2029793 I e canFam3.chr24 47604511 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790194 1 + 182113224 I a score=1468425.000000 s hg38.chr20_KI270870v1_alt 108084 109 + 183433 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCCTGCCAAAAGCTGACTTCTATCTGCAATTAGAGAAAGAG--ATACCATCCCTGGCCCTGAGGTCCCAGAGATCCT---GT s panTro5.chr20 66434415 109 + 66533130 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCCTGCCAAAAGCTGACTTCTATCTGCAATTAGAGAAAGAG--ATACCATCCCTGGCCCTGAGGTCCCAGAGATCCT---GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109555 109 + 62195757 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCCTGCCAAAAGCTGACTTCTATCTGCAATTAGAGAAAGAG--ATACCATCCCTGGCCCTGAGGTCCCAGAGATCCT---GT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498790 109 - 578057 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTTCTGCCAAAAGCTGACTTCTATCTGCAATTAGAGAAAGAG--ATACCATCCCTGGCCCTGAGGTCCCAGAGATCCT---GT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110021974 109 - 110113093 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCCTGCCAAAAGCTGACTTCTATCTGCAATTAGAGAAAGAG--ATACCATCCCTGGCCGCAAGGTCCCAGAGATCCT---GT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748546 111 - 92844088 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCTTGCCAAAAACTGACTTCTATCTGCAATTAGAGAAAGAGAGATACCATCCCCGGCCCTGAGGTCCCAGAGAGCCT---GT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416543 111 + 96509753 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCTTGCCAAAAACTGACTTCTATCTGCAATTAGAGAAAGAGATATACCATCCCCGGCCCTGAGGTCCCAGAGAGCCT---GT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887536 109 - 16982598 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCTTGCCAAAAACTGACTTCTATCTGCAATTAGAGAAAGAG--ATGCCATCCCTGGCCCTGAGGTCCCAGAGAGCCT---GT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689145 109 - 3785965 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCTTGCCAAAAACTGACTTCTATCTGCAATTAGAGAAAGAG--GTACCATCCCTGGCCCTGAGGTCCCAGAGAGCCT---GT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73738 108 - 179258 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCTTGCCAAAAACTGACTTCTATCTGCAATTAGAGAAAGAG--GTACCATCCCTGGCCCTGAGGTCCC-GAGAGCCT---GT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559301 109 - 5823884 TCTCTATCCAGCTTTATCTGGTGGTTTGTGTTTCTTGACAAAAGCTGACTTCTATCTGCAATTAGAGAAAGAG--ATACCATCCCTGGCCCTGAGGTGCCAGAGATCCT---GT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41882 109 + 372756 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTCCCTGCCAAAAGCTGACTTCTATCTGCAATTAGAGAAAGAG--ACCCCATCCCTGGCCCTGAGGTCCCAGAGATCGT---GC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279162 109 + 16356641 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCCTGCCAAAAGCTGATTTCTATCCTCAATTAGAGAAAGAG--ATCCCATCCCTGGCCCTGAGGTCCCAGAGAGCCT---GT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148406 109 + 1231380 TCTCTGTCCAGCTTGATCTGGTGGTTTGTGTTTCCTGCCAAAAGCTGACTTCTATCTGCAATTAGAGAAAGAG--ATCCCATCGCTGGCCCTGAGGTCCCAGAGATCCT---GT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2677987 109 + 11732439 TCTCTGTCCAGCTTGATCTGGTGTTTTGTGTTTCCTGCCAAAAGCTGACTTCTATCTGCAGTTAGAGAAAGAG--ATCCCATCCCTGGCCCTGAGGTCCCAGAGATCCT---GT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56860479 106 + 57149010 TCTCTGCCCAGCTTGGTCTGGTGGGTTGTGTTTCCTGGCAAAAGCTGATTTCTGTCTGCAGTTAGACAAAGAT----GCCAG-CCTGGCCCTGAGGGCCCAGAGAACCT---GT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1855545 107 - 2029793 TCTCTGCCCAGCTTGGTCTGGTGGATCATGTTTCCTGGCAAAAGCTGATTTCTGTCTGCAGTTGGAGAGAGAG----ACCGTCCCTGGCCCTGAGGGCCCAGAGAGCCT---GT i proCoq1.NW_012150197v1 I 267 I 154 s otoGar3.GL873542 22842424 95 + 22939663 TCTTTGCTTGGCTTGATC----------TGTTTCCTGGCAAAAGCTGACTTCTGT-TATAGCCAGAGATGGAA----ACCAT-CCCTGCACAGAGGGCCCAGGGCCCTT---GT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181790195 109 + 182113224 TCTTTGTGCAACTTAATCTGGTAGGTAATATATCCTGCCAAAAGCTGACATCTATCTGCAATTACAGA--GAG--ATAACA-CCCTGAGCCTGAGGGTAGAGAGATTATCAGGT i mm10.chr2 I 1 I 13 s canFam3.chr24 47604511 107 + 47698779 TCTCCGTCCAGCCTTATCTGCTGGGCTGAGTTTCCTGTTAGAAGCTGACTTCCAGCTGCAGTTAGAGAAGCAG--ATACTGT-CCTGGCCCCGAAG-CCCGGACAGCTC---AT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 242058 98 - 397369 CCTCTGTCCAGGTTTACCGGGCGGGTCATGTTCCTTGCC--AAGCAGACTT-TCCCTGCAATGAGAGGAGATG------CACCCTTGGCTCCAGGGG--CAGAGAGCCT----- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=-2275.000000 s hg38.chr20_KI270870v1_alt 108193 1 + 183433 C s panTro5.chr20 66434524 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109664 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498899 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022083 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748657 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416654 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887645 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689254 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73846 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559410 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41991 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279271 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148515 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678096 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56860585 1 + 57149010 C i micMur3.chr18 C 0 I 159 s otoGar3.GL873542 22842519 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181790317 1 + 182113224 C i mm10.chr2 I 13 C 0 e proCoq1.NW_012150197v1 1855652 154 - 2029793 I e canFam3.chr24 47604618 1 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 242156 0 - 397369 C a score=1346381.000000 s hg38.chr20_KI270870v1_alt 108194 175 + 183433 TGAGGTG-----GAGCATCTGTCCCACTTTGTAAAACTGCCAGGCTGCTCAGGGGAGCTTCTGCGGCGAGCACCAGGCTTGGGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAGCGCCCTGGGGAAAC-----GGCTCAGGTCTCACTGAGATTTGCCT s panTro5.chr20 66434525 175 + 66533130 TGAGGTG-----GAGCATCTGTCCCACTTTGCAAAACTGCCAGGCTGCTCAGGGGAGCTTCTGCGGCGAGCACCAGGCTTGGGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAGCGCCCTGGGGAAAC-----TGCTCAGGTCTCACTGAGATTTGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109665 175 + 62195757 TGAGGTG-----GAGCATCTGTCCCACTTTGCAAAACTGCCAGGCTGCTCAGGGGAGCTTCTGCGGCGAGCACCAGGCTTGGGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAGCGCCCTGGGGAAAC-----TGCTCAGGTCTCACTGAGATTTGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 498900 175 - 578057 TGAGGTG-----GAGCATCTGTCCCACTTTGCAAAACTGCCAGGCTGCTCAGGGGAGCTTCTGTGGCGAGCACCAGGCTTGGGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAGCGCCCTGGGGAAAC-----TGCTCAGGTCTCACTGAGATTTGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022084 172 - 110113093 TGAGCTG-----GAGTATCTGTCCCACTCTGCAAAACTGCTGGGCTGCTCAGGGGAGCTTCTGGGGC-AGCACCGGGCTT-GGGGAGCCCCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAGGACCCCGGGGAAAC-----TGCTCAGGTCTCACTGAGA-TTGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748658 166 - 92844088 TGAGGTG-----GAGCATCCGTCCCGCTCTGCAGAA--------CTGCTCAGGGGAGCTTCTGGGGCGAGCACCGGGCTGGAGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAGGGCCCTGGGAAAAC-----TGCTCAGGTCTCACTGAGA-TTGCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416655 166 + 96509753 TGAGGTG-----GAGCATCCGTCCCGCTCTGCAGAA--------CTGCTCAGGGGAGCTTCTGGGGCGAGCACCGGGCTGGAGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAGGGCCCTGGGAAAAC-----TGCTCAGGTCTCACTGAGA-TTGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887646 166 - 16982598 TGAGGTG-----GAGCATCCGTCCCGCTCTGCAGCA--------CTGCTCAGGGGAGCTTCTGGGGCGAGCACCGGGCTGGAGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAGGGCCCTGGAAAAAC-----TGCTCAGGTCTCACTGAGA-TTGCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689255 166 - 3785965 TGAGGTG-----GAGCATCTGTCCCACTCTGCAGAA--------CTGCTCAGGGGAGCTTCTGGGGCGAGCACCGGGCTGGAGGGAGCAGCTCACTCTGTT-GACCTCGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAAGGCCCTGGGAAAAT-----TGCTCAGGTCTCACTGAGA-TTGCCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 73847 166 - 179258 TGAGGTG-----GAGCGTCTGTCCCACTCTGCAGAA--------CTGCTCAGGGGAGCTTCTGGGGCGAGCACCGGGCTGGAGGGAGCAGCTCACTCTGTT-GACCTCGGAGGACTCTCTGGGAGGTCAGGAAAGGGTGAGGGCCCTGGGAAAAT-----TGCTCAGGTCTCACTGAGA-TTGCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559411 166 - 5823884 TGAGGTG-----GAGCATCCGTCCCACTCTGCAGAA--------CTGCTCAGGGGAGCTTCTGGGGCGAGCACCGGGCTGGAGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGAAAGGGGGAGGGCCCTGGGAAAAC-----TGCTCAGGTCTCACTGAGA-TTGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 41992 170 + 372756 TGAGGTG-----GAGTATCTGTCCCATTCAGCAAAACAGCCAGGCTTCTCAGGGGGGCTTCTGGGGTGAGCATCAGGCTAGAGGGAGCAGCTCACTCTGTT-GACCTT---GGACTCTCTGGGAGGTCAGGACAGGGTGAGGGCCCCAG-AGAAC-----CACGCAGGTCTCACTGAGA-TTGCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279272 172 + 16356641 TGAGGCA-----GAGCGTATGTCTCATTCGGCAAAACAGCCAGGCTGCTCAGGGGGTCTTCTGGGGCGAGCATCAGGCTGGAGGGAGCAGCTCCCTCTGCT-GACCTTGGAGGACTCTCTGGGAGGTCAGGACAGGGTGAGGACCCCAGAAAAAC-----TGCGCAGGTCT--CTGAGA-TTGCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148516 172 + 1231380 TGAGGTG-----GAGTGTCTGTCCCATCCGGCAGAATAGCCAGGCTGCTCAGGGGGGCTTTTGGGGTGAGCATCAGGCTGGAGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGATCAGGACAGGGTGAGGGCCCCAGAAAAAC-----TGCGCAGGTCT--CTGAGA-TTGTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678097 174 + 11732439 TGAGGTG-----GAGCGTCGGTCCCATTCGGCAAAACAGCCAGGCTGCTCGGGGGGTCTTCTGGGGCGAGCATCAGGCTGGAGGGAGCAGCTCACTCTGTT-GACCTTGGAGGACTCTCTGGGAGGTCAGGACAGGGTGAGGGCCCCAGAAAAAC-----CACGCAGGTCTCACTGAGA-TTTCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22842520 126 + 22939663 ATAGGCG-----GAGCACTTGTTTCAGTCTGCAAAA--------CTGCCAGGTGCCACAACTGGAG-------------------------TCATT----------------GACATTCCAAGAGGTCAGGGAAGGGTGGGGGCCCTGGAAAAGC-----AGTTTGGTTTTCCCTAGGA-TTGTTT i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181790318 114 + 182113224 TGGGGTGT----GTGTGTATGT----------------------CTGGTGTAGGGA--TCCCAGACCAAGCACCTTGTTA-AGGGGGCAGCTTACTCTACT-GACCTCGGGGGAAGTTCTTATAGGTCAGCAAAGGGTGGGCAT------------------------------------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47604619 110 + 47698779 -------TTAGTGGGCATGGGGCCCACTCTGCAGAACCACCAG-CCTCTCACGGGGGCCTCTGGGG------------------------------------AACCCTGCAGGACATTCTAGGAGGCGGGG-------------------------------TTCAGTTTGCACTGGGA-TTGCCT i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 242156 86 - 397369 ------------------------------------------------------------------TGAGCGC---------AGGGGCAGGT-GCTCCGTGAGCCCTTGGAGGGAATTCCCAGGAGGCAGG----------GGCCTGGGAGAAGCAGCCATGTGCAGGTGTC-------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1855652 154 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56860586 159 + 57149010 I a score=13600.000000 s hg38.chr20_KI270870v1_alt 108369 1 + 183433 C s panTro5.chr20 66434700 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109840 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499075 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022256 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748824 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416821 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887812 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689421 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74013 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559577 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42162 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279444 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148688 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678271 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1855806 1 - 2029793 C i proCoq1.NW_012150197v1 I 154 C 0 s canFam3.chr24 47604729 1 + 47698779 C i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790432 0 + 182113224 C e micMur3.chr18 56860586 159 + 57149010 I e dasNov3.JH569290 242242 0 - 397369 C e otoGar3.GL873542 22842646 1 + 22939663 I a score=462396.000000 s hg38.chr20_KI270870v1_alt 108370 43 + 183433 CACTCGTCCTTGGCAAA-----CCTCTCGGCTGTTTAACTTAGTTTAT- s panTro5.chr20 66434701 43 + 66533130 CACTCGTCCTTGGCAAA-----CCTCTCGGCTGTTTAACTTAGTTTAT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109841 43 + 62195757 CACTCGTCCTTGGCAAA-----CCTCTCGGCTGTTTAACTTAGTTTAT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499076 43 - 578057 CACTCGTCCTTGGCAAA-----CCTCTCGGCTGTTTAACTTAGTTTAT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022257 43 - 110113093 CACTTGTCCTTGGCAAT-----CCTCTCGGCTGTTTAACTTAGTTTAT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748825 43 - 92844088 CACTTGTCCTTGGCAAA-----CCTCTCGGCTGTTTAACTTAGTTTAT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416822 43 + 96509753 CACTTGTCCTTGGCAAA-----CCTCTCGGCTGTTTAACTTAGTTTAT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887813 43 - 16982598 CACTTGTCCTTGGCAAA-----CCTCTCGGCCGTTTAACTTAGTTTAT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689422 43 - 3785965 CACTTGTCCTTGGCAAA-----CCTCTCGGCTGTTTAACTTAGTTTAT- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74014 43 - 179258 CACTTGTCCTTGGCAAA-----CCTCTCGGCTGTTTAACTTAGTTTAT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559578 43 - 5823884 CACTTGTGCTTGGCAAA-----CCTCTCGGCTGTTTAACTTAGTTTAT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42163 43 + 372756 CACTTGTCTTTGGCAAA-----CCTCTTGGCTGTTCAACTTGGTTTCT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279445 31 + 16356641 CACTTGTCT-----------------TTGGCTGTTTAACTTGGTTTCT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148689 43 + 1231380 CACTTGTCTTTGGCAAA-----CCTCTTGGCTGTTTAACTCGGTTTCT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678272 43 + 11732439 CACTTGTCTTTGGCAAA-----CCTCTCGGCTGTTTAACTTGGTTTCT- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56860745 43 + 57149010 CACTTGTCCTTGGCAGA-----CCTCTCAGCTGTCTGACTTAGCTTAT- i micMur3.chr18 I 159 I 36 s proCoq1.NW_012150197v1 1855807 42 - 2029793 CACTTGTCCTTGGCAGA-----CCTCTCAGCTGT-TGACTCAGTTCAT- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22842647 38 + 22939663 -----GTCCTTGGCACA-----CCTCTCAGATATTTGTCTTAGTTTGT- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181790432 40 + 182113224 --CTTGTCCTTGTGAAA------GTGTTAGTTATTTTATTAGGTTTAT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47604730 19 + 47698779 CACT-----------------------------TTTTATTCCATTTGT- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 242242 39 - 397369 -------TTCCGGCAAAGCTAGTCTCCGGGCT---TGGCCTGGTTGGGT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=279889.000000 s hg38.chr20_KI270870v1_alt 108413 22 + 183433 GCTGTTAGGGCAATGAGCCTTT s panTro5.chr20 66434744 22 + 66533130 GCTGTTAGGGCAATGAGCCTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109884 22 + 62195757 GCTGTTAGGGCAATGAGCCTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499119 22 - 578057 GCTGTTAGGGCAATGAGCCTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022300 22 - 110113093 GCTGTTAGGGCAATGAGCCTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748868 22 - 92844088 GCTGTTAGGGCAATGAGTCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416865 22 + 96509753 GCTGTTAGGGCAATGAGTCTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887856 22 - 16982598 GCTGTTAGGGCAATGAGTCTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689465 22 - 3785965 GCTGTTAGGGCAATGAGTCTTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74057 22 - 179258 GCTGTTAGGGCAATGAGTCTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559621 22 - 5823884 GCTGTTAGGGCAATGAGTCTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42206 22 + 372756 GCTGTTAGGGCAGTGAGGCTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279476 22 + 16356641 GCTGTTAGGGCAATGAGCCTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148732 22 + 1231380 GCTGTTAGGGCAATGAGCCTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678315 22 + 11732439 GCCGTTAGGGCAATGACCCTTC i aotNan1.NW_018500483v1 C 0 I 182 s proCoq1.NW_012150197v1 1855849 22 - 2029793 GCTGTTAGGGCAACACGCCTTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22842685 22 + 22939663 GCTGTTAGGGAAACATGCCTTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181790472 22 + 182113224 ACTTTTAGGGAAATATTCTTCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47604749 22 + 47698779 GCCGTGAGGGCAACGTGGCTTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 242281 20 - 397369 GCTG--GGAGCCCCGTGGCTTC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56860788 36 + 57149010 I a score=138651.000000 s hg38.chr20_KI270870v1_alt 108435 18 + 183433 AAAATCACAATTCCCACA s panTro5.chr20 66434766 18 + 66533130 AAAATCACAATTCCCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109906 18 + 62195757 AAAATCACAATTCCCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499141 18 - 578057 AAAATCACAATTCCCACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022322 18 - 110113093 AAAATCACAATTCCCACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748890 18 - 92844088 AAAATCACAATTCTCACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416887 18 + 96509753 AAAATCACAATTCTCACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887878 18 - 16982598 AAAATCACAATTCTCACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689487 18 - 3785965 AAAATCACAATTCTCACA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74079 18 - 179258 AAAATCACAATTCTCACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559643 18 - 5823884 AAAATCACAACTCCCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42228 16 + 372756 AAAATCACAATACC--CA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279498 16 + 16356641 AAAATCACAATTCC--CA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148754 16 + 1231380 AAAATCACAATTCC--CA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678519 16 + 11732439 aaaaTCACAATTCC--CA i aotNan1.NW_018500483v1 I 182 C 0 s proCoq1.NW_012150197v1 1855871 18 - 2029793 GAAATCCAAACTCCCATG i proCoq1.NW_012150197v1 C 0 I 2 s otoGar3.GL873542 22842707 13 + 22939663 TAAGTCCAAACTT----- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181790494 18 + 182113224 GAAAGTCTAAGTCCTATG i mm10.chr2 C 0 I 6 s canFam3.chr24 47604771 18 + 47698779 TCTGTTCGGACTCCCACA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 242301 18 - 397369 TCTGCCCTAACTCCCACC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56860788 36 + 57149010 I a score=2915210.000000 s hg38.chr20_KI270870v1_alt 108453 230 + 183433 TGT---TTTCCCTGTTTCTG--TC----TTTTTCCCAGGACCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGGAAGTCTTCCTGTTAGCACCAAGCATCGTCTATGTGCCTGTGAC------------------------CCTGGAGATATCCTAAATGTCCCAAAC-------GGGGTCTTCTTGGATTGACCAAACACCCCT-GGTGAGCCCCTGCTTTCCCTAAGGAGACTGCCTTTCTCCTGGCCACGTGTCCAGCTATCTTGGC s panTro5.chr20 66434784 230 + 66533130 TGT---TTTCCCTGTTTCTG--TC----TTTTTCCCAGGACCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGAAAGTCTTCCTGTTAGCACCAAGCATCGTCTATGTGCCTGTGAC------------------------CCTGGAGATATCCTAAATGTCCCAAAC-------GGGGTCTTCTTGGATTGACCAAACACCCCT-GGTGAGCCCCTGCTTTCCCTAAGGAGACTGCCTTTCTCCTGGCCACGTGTCCAGCTATCTTGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62109924 230 + 62195757 TGT---TTTCCCTGTTTCTG--TC----TTTTTCCCAGGACCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGAAAGTCTTCCTGTTAGCACCAAGCATCGTCTATGTGCCTGTGAC------------------------CCTGGAGATATCCTAAATGTCCCAAAC-------GGGGTCTTCTTGGATTGACCAAACACCCCT-GGTGAGCCCCTGCTTTCCCTAAGGAGACTGCCTTTCTCCTGGCCACGTGTCCAGCTATCTTGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499159 230 - 578057 TGT---TTTCCCTGTTTCTG--TC----TTTTTCCCAGGACCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGGAAGTCTTCCTGTTAGCACCAAGCATCGTCTATGTGCCTGTGAC------------------------CCTGGAGATATCCTAAATGTCCCAAAT-------GGGGTCTTCTTGGATTGACCAAACACCCCT-GGTGAGCCCCTGCTTTCCCTAAGGAGACTGCCTTTCTCCTGGCCACGTGTCCAGCTGTCTTGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022340 230 - 110113093 TGT---TTTCCCTGTTTCTC--TC----TTTTTCCCAGGACCCCCGGAGGCCACAGCTGCAGACCTCAGGTAAGGAACCCTTCCTGTTAGCACCGAGTGTCATCTATGTGCCTGTGAC------------------------CCTGGAGATACCCTAAATGTCCCAAAC-------AGGGTCTTCTTGGATTGACCAAACACCCCT-GGTGAGCTCCTGCTTTCCCTAAGGAGACTGCCTTTCTCATGGCCACGTGTCCAGCTGTCTTGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92748908 229 - 92844088 TGT---TTTCCCTGTTTCTC--TC----TTTTTCCCAGGACCCCCCGAGACCACAGCTGCAGACCTCAGGTAAGGACGTCTTCCTGTTAGCACCAAGCATCGTCTCTGTGCCTGTGAC------------------------CCTGGAGAGACCCTAAATGTCCCAAAC-------GGGGTCTTCCTGGATTGACCAAACACCCC--GGTGAGCCCCTGCTTTCCCTAAGGAGACTGCCTTTCTCCTGGCCACGTGTCCAGCTGTCTTGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96416905 229 + 96509753 TGT---TTTCCCTGTTTCTC--TC----TTTTTCCCAGGACCCCCCGAGACCACAGCTGCAGACCTCAGGTAAGGACGTCTTCCTGTTAGCACCAAGCATCGTCTCTGTGCCTGTGAC------------------------CCTGGAGAGACCCTAAATGTCCCAAAC-------GGGGTCTTCCTGGATTGACCAAACACCCC--GGTGAGCCCCTGCTTTCCCTAAGGAGACTGCCTTTCTCCTGGCCACGTGTCCAGCTGTCTTGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16887896 229 - 16982598 TGT---TTTCCCTGTTTCTC--TC----TTTTTCCCAGGACCCCCCGAGACCACAGCCGCAGACCTCAGGTAAGGACGTCTTCCTGTTAGCACCAAGCATCGTCTCTGTGCCTGTGAC------------------------CCTGGAGAGACCCTAAATGTCCCAAAC-------GGGGTCTTCCTGGATTGACCGAACACCCC--GGTGAGCCCCTGCTTTCCCTAAGGAGACTGCCTTTCTCCTGGCCACGTGTCCAGCTGTCTTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689505 229 - 3785965 TGT---TTTCCCTGTTTCTC--TC----TTTTTCCCAGGACCCTCCGAGACCACAGCTGCAGACCTCAGGTAAGGAAGTCTTCCTGTTAGCACCAAGCATCGTCTATGTGCCTGTGAC------------------------CCTGGAGATGTCCCAAATGTCCCAAAC-------GGGGTCTTCTTGGGTTGACCAAACACCCC--GGTGAGCCCCTGCTTTCCCTAAGGAGACCGCCTTTCTCCCGGCCACGTGTCCAGCTGTCTTGGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74097 229 - 179258 TGT---TTTCCCTGTTTCTC--TC----TTTTTCCCAGGACCCCCCGAGACCACAGCTGCAGACCTCAGGTAAGGAAGTCTTCCTGTTAGCACCAAGCATCGTCTATGTGCCTGTGAC------------------------CCTGGAGATGTCCCAAATGTCCCAAAC-------GGGGTCTTCTTGGGTTGACCAAACACCCT--GGTGAGCCCCTGCTTTCCCTAAGGAGACTGCCTTTCTCCTGGCCACGTGTCCAGCTGTCTTGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559661 229 - 5823884 TGT---TTTCCCTGTTTCTC--TC----TTTTTCCCAGGACCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGGAAGTCTTCCTGTTAGCACCAAGCATCCTCTGTGTGCCTGTGAC------------------------CCTAGAGATATCCTAAATGTCCCAAAC-------GGGGTCTTCTTGGATTGACCAAACACCCC--GGTGAGCCCCTGCTTTCCCTAAGGAGACCGCCTTTCTCCTGGCCGTGTGTCCAGCTATCTTGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42244 230 + 372756 TGT---TTTCCCTGTTTTTC--TC----TTTTTTCCAGGAGCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGGAAGTCTTCCTGTTAGCACCAAGCATTGTCTATGCATCTGTGAC------------------------CCTGGAGATATCTTAAATGTCCCAATC-------GAGGTCTTCTTGGATTGACTGAATGTGCCT-GGTGAGCCCCTGCTTTCCTTAAGGAGGCTGCCTTTCTCCTGGCCATGCATCCAGCTATCTTGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279514 230 + 16356641 TGT---TTTCCCTGTTTATC--TC----TTTTTCCCAGGAGCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGGAAGTCTTCCTGTTAGCACCAAGCATTGTCTATGCACCTGTGAC------------------------CCTGGAGATATCTTAAATGTCCCAATC-------GGGGTCTTCTTGGATTGACCGAATGTGCCT-GGTGAGCCCCTGCTTTCCTTAAAGAGGCTGCCTTTCTCCTGGCCATGCATCCAGCTATCTTGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1148770 230 + 1231380 TGT---TTTCCCTGTTTCTC--TC----TTTTTCCCAGGAGCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGGAAGTCTTCCTGTTAGCACCAAGCATTGTCTATGCACCTGTGAC------------------------CCTGGGGATATCTTAAATGTCCCAATT-------GGGGTCTTCTTGGATTGACCGAATGTGCCT-GGTGAGCCCCTGCTTTCCTTAAGGAGGCTGCCTTTCTCCTGGCCATGCATCCAGCTGTCTTGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678535 219 + 11732439 CGT---TGTCCCTGTTTCTC--TC----TTTTTCCCAGGAGCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGGAAGTCTTCCTGTTAGCA-GAAGCATTGTCTGTGCACCTGGGAC------------------------CCTGGAGATACCTTAAATGTCCCAGTC-------GGGGTCTTCCTGGATTGGCCGAATGTGCCT-GGTGAGCCCCTGCTTTCCTGAAGGAGGCTGCCTTTCTCCTGGCCATGCATCCAG---------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56860824 230 + 57149010 TGT---TTTCCCTGTTTCTC--TC----TCTTACCCAGGACCCCCAGAGACCACAGCTGCAGACCTCAGGTAAGGAGGTCTTCCTGTTAGC-CCAAGCGTTGCCCTTGTGCCTGTGGC------------------------CCTGTAGAAGTCCTAGGTGTCCCAAAT-------GGGGTCTTCTTGGCTTGACCAAACACCCCTCTGCAAGCCCCTGCTTTCCCCAAGGAGACTGCCTTCCTCCTGGCCACGTGGCCAGCTATCTTGGC i micMur3.chr18 I 36 I 77 s proCoq1.NW_012150197v1 1855891 230 - 2029793 TGT---TTTCCCTGTTTCTC--TC----TCTTACCCAGGACCCCCAGAGACCACAGCCGCAGACCTCAGGTAAGGAAGTCTTCCCGTTAGC-CCATGCGCTGCCCTTGTGCCTGTGAC------------------------CCTGTACAAGTCCTAGGTGTCCCCAGT-------GGGGTCTTCTCGGCTTGACCAAGCGCCCCTCTGCAAGCCCCCGCTTTTCCCAAGGAGGCTGCCTTCCTCCTGGCCATGTGTCCAGCTATCTTGGC i proCoq1.NW_012150197v1 I 2 C 0 s otoGar3.GL873542 22842720 221 + 22939663 --T---TCTCCCTGTTTCTC--TC----TCTTGCCCAGGACCCCCAGAAAGCACAGCTGCAGACCTCAGGTAAGGAAACCATCCTGTTAGCACCAAGCATCACACATGTGCCTGTTAC------------------------CCTGTACAAGTCCTGAATTTTCAAAAT-------GAGGTCTTCTTGGATTGAGCGAATACCCCTCTGCAAGCCCCTACTCTCCCTAATAAG-CTGCCTTCCTCCTG-------GTCCTGCTATCTTGGT i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181790518 194 + 182113224 TAT---TTT---TGTTTTTC--CCTATATCTTACCCAGGACCCCCAGAGACCACAGGTGCAGACCTCAGGTAAGAAAGTATTCCTATTTGCA-TAAGCACTGT-TCTCCACCT-----------------------------TCT--------------TGCCCATAAT-------GTAATTTTTATAAAATTTCCCACAAACTCT-TGTG-------------TCTGAGGAAACAGCTTTTCTCT--GTGACATATCTTGCTGTCTATA- i mm10.chr2 I 6 C 0 s canFam3.chr24 47604789 185 + 47698779 TGTG--TTTCCCTGTTTCTCTTTC----TCTCACTCAGTGCCCCCAGAGCCCACAGGTGCCGACCTCAGGTAAGAAAGGCTTTCTGCTAGCACCCGGCGTTGCGCATG--CCTGTGAC------------------------CCTGAG--CACCCCCAGCGTCCCACAC-------GGGGCGTTCCCG--------------CTCT-CCCGAGCTCTTGCCT------------------------------CGAGCCCGGTGGTGTTCAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 242319 253 - 397369 TGTGCTTTTCTCTGTCCCTC--TT-------CTACCAGCACCCCCGGAGACCACAGGTGCAGACCTCAGGTAAGGACGTGTTCTCATTAGCG-TGGGATTCACCCGGCGCCCTGTGGCAAACACTGTGGGCTGCTTCCTCAACCCGATGATGTCCCCACCATCCCCAACCCTGGGTGGGATGCTCTAGGATGGACACAAACCCTCC-CGCCAGCCT---CCTTCCCGACGGAG---GCGTTCCTCCTTGGC-TATGCCCAGTTCTTTTTAT i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I a score=349628.000000 s hg38.chr20_KI270870v1_alt 108683 39 + 183433 CCCATCTCTATCTGTTCTCACCTCTGTCCTGGCCCCATC s panTro5.chr20 66435014 39 + 66533130 CCCATCTCTATCTGTTCTCACCTCTGTCCTGGCCCCATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110154 39 + 62195757 CCCATCTCTATCTGTTCTCACCTCTGTCCTGGCCCCATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499389 39 - 578057 CCCATCTCTATCTGTTCTCACCTCTGTCCTGGCCCCATC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022570 38 - 110113093 CCCATCT-TATCCGTTCTCACCTCTGTCCTGGCCCCATC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749137 39 - 92844088 CCCATCTCTGTCCGTTCTCACCTCTGTCCTGCCCCCATC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417134 39 + 96509753 CCCATCTCTGTCCGTTCTCACCTCTGTCCTGCCCCCATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888125 39 - 16982598 CCCATCTCTGTCCGTTCTCACCTCTGTCCTGCCCCCATC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689734 39 - 3785965 CCCATCTCTGTCCGTTCTTACCTCTGTCCTGCCCCCATC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74326 39 - 179258 CCCATCTCTGTCCGTTCTCACCTCTGTCCTGCCCCCATC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559890 39 - 5823884 CCCATCTCTGTCCGTTCTCAGCTCTGTCATGCCCCCTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42474 34 + 372756 CCCATCTCTACCCTTTCTCACCTCTGTCCTGGCC----- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279744 34 + 16356641 CCCATCTCTACCCTTTCTCACCTCTGTCCTGGCC----- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149000 34 + 1231380 CCCATCTCTACCCTTTCTCACCTCTGTCCTGGCC----- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678754 27 + 11732439 -------CTACCCTTTCTCACCTCTGTCCTGGCC----- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1856121 38 - 2029793 TCTGTCTCTG-CCTTTCTTACCCCTGTCCTGGCCCCATC i proCoq1.NW_012150197v1 C 0 I 93 s otoGar3.GL873542 22842943 36 + 22939663 TCTGTCTCTG-CAGTTTTT--TACTTTCTTGGCCTCATC i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181790712 36 + 182113224 TCCAACTATGCTCTTTCTCAGCTCAAAATTGGTCAC--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47604974 39 + 47698779 CTGGCCTCTGCCCTCTCCCGTCTCTGCCCCGGCCGCACC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 242572 30 - 397369 ---------CCCTAGTCTGGTCTCTGCCCTGGCCCCATC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861054 77 + 57149010 I a score=251327.000000 s hg38.chr20_KI270870v1_alt 108722 43 + 183433 ATGTG-GCGCA-CCAGCATCATGGCAAGGACACGGATGTGCCTAC s panTro5.chr20 66435053 43 + 66533130 ATGTG-GCGCA-CCAGCATCATGGCAAGGACACGGATGTGCCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110193 43 + 62195757 ATGTG-GCGCA-CCAGCATCATGGCAAGGACACGGATGTGCCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499428 43 - 578057 ATGTG-GCGCA-CCAGCATCATGGCAAGGACACGGATGTGCCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022608 43 - 110113093 ACGTG-GCGCC-CCAGCATCATGGCAAGGACACGGATGTGCCCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749176 43 - 92844088 ATGTG-GTGTC-CCAGCATCATGGCGAGGACACGGATGTGCTCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417173 43 + 96509753 ATGTG-GTGTC-CCAGCATCATGGCGAGGACACGGATGTGCTCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888164 43 - 16982598 ATGTG-GTGTC-CCAGCATCATGGCGAGGACACGGATGTGCTCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689773 43 - 3785965 ATGTG-GTGTC-CCAGCATCATGGCGAGGACACGGATGTGCTCAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74365 43 - 179258 ATGTG-GTGTC-CCAGCATCATGGCGAGGACACGGATGTGCTCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559929 23 - 5823884 ATGTG-GTGTC-CCAGCATCATGGC-------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42508 33 + 372756 ------------CCAGCACCATGGTGGAGACACAGATGTGCTTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279778 33 + 16356641 ------------CCCACACCATGGCAGGGACACAGATGTGCTTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149034 33 + 1231380 ------------ACAGCACCACGGTGGGGACACAGATGTGCTTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678781 33 + 11732439 ------------CCAGCACCATGGCGGGGACACAGATGTGCTTGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22842979 43 + 22939663 AGGAG-GTGTC-CTAGCCTCAGAGCAAGGACACAAGTTTTCTCAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181790748 5 + 182113224 ----------------CCTCG------------------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47605013 38 + 47698779 ------GCGCAGCCAGCCTCG-ATCAGGGCCACAGGCGTTCTCGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 242602 43 - 397369 ATGTGAGTGTC-CCAAGCCCAGGAC-AGGACACCGACCTGCTCAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1856159 93 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861054 77 + 57149010 I a score=254007.000000 s hg38.chr20_KI270870v1_alt 108765 25 + 183433 ACCTGGTCACCACGAGGACCTGGAC s panTro5.chr20 66435096 25 + 66533130 ACCTGGTCACCACGAGGACCTGGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110236 25 + 62195757 ACCTGGTCACCACGAGGACCTGGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499471 25 - 578057 ACCTGGTCACCACGAGGACCTGGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022651 25 - 110113093 ATCTGGTCACCACGAGGACCTGGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749219 25 - 92844088 ACCTGGTCACCGAGAGGACCTGGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417216 25 + 96509753 ACCTGGTCACCGAGAGGACCTGGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888207 25 - 16982598 ACCTGGTCACCGAGAGGACCTGGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689816 25 - 3785965 ACCTGGTCACCGAGAGGACCTGGAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74408 25 - 179258 ACCTGGTCACCGAGAGGACCTGGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559952 12 - 5823884 -------------AAGGACCTGGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42541 25 + 372756 ACCTGGTCACCATGAGGACCTGGAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279811 25 + 16356641 TCCTGGTCACCATGGGGACCTGGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149067 25 + 1231380 TCCTGGTCACCGCGAGGACCTGGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678814 14 + 11732439 ACCTGGTCACCGTG----------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56861131 25 + 57149010 ACCTGGTTACCACCAGGACCTGGAC i micMur3.chr18 I 77 C 0 s otoGar3.GL873542 22843022 19 + 22939663 ACCTGCACACC------ACCTGGAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181790753 25 + 182113224 AACTGTTCTTCACTAGCATTTGCAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47605051 24 + 47698779 GCCTGGTCACCACCAGGACCTG-AC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 242645 25 - 397369 ACCTAGTCACCAGCAGGGCCCGAGC i dasNov3.JH569290 C 0 I 711 e proCoq1.NW_012150197v1 1856159 93 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I a score=325934.000000 s hg38.chr20_KI270870v1_alt 108790 38 + 183433 TGTCACTGCGGTCCCCCAAACCGAAAACAAGCCGCTCT s panTro5.chr20 66435121 37 + 66533130 TGTCACTGCGGTCCCCCAAACCGAAA-CAAGCCGCTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110261 37 + 62195757 TGTCACTGCGGTCCCCCAAACCGAAA-CAAGCCGCTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499496 38 - 578057 TGTCACTGCGGTCCCCCAAACCGAAAACGAGCCGCTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022676 38 - 110113093 TGTCACCGCGGTCCCCCAAACCAAAAACGAACCGCTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749244 37 - 92844088 TGTCGCTG-GGTCCCCCAAACCAAAAACGAGCCGCTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417241 37 + 96509753 TGTCGCTG-GGTCCCCCAAACCAAAAACGAGCCGCTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888232 37 - 16982598 TGTCGCTG-GGTCCCCCAAACCAAAGACGAGCCGCTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689841 37 - 3785965 TGTCACTG-GGTCCCCCAAACCAAAAAGGAGCCACTCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74433 37 - 179258 TGTCACTG-GGTCCCCCAAACCAAAAACGAGCCGCTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5559964 37 - 5823884 TGTCACTG-GGTCCCCCAAACCTAAAACGAGCCACTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42566 38 + 372756 TGTCACCACGGTCCCCCAAGCCAGGAACAAGCTACTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279836 38 + 16356641 TATCACCAGAGTCCCCCAAACCAGGAACAAGCTACCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149092 38 + 1231380 TGTCACCACGGTTCCCCAAACCAGGAACAAGCTACTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678828 28 + 11732439 ----------GTCCCCCAAACCCGGAACAAGCCTCTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56861156 38 + 57149010 TGTCACCAGAGTCCCCCAAACCAGGGACAAGGCACTTT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22843041 38 + 22939663 TGTCACAATAGTCCCTGACACCATGAGCAAGGTGTTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181790778 37 + 182113224 TGTCACCATGGTCCCCCAAACCACAA-CAAGTTGCTTT i mm10.chr2 C 0 I 456 s canFam3.chr24 47605075 29 + 47698779 TGTGTGCACGGTCCCC---------GGCCAGCCACGCG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856159 93 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 242670 711 - 397369 I a score=84616.000000 s hg38.chr20_KI270870v1_alt 108828 11 + 183433 ------CTTACCGGACC s panTro5.chr20 66435158 11 + 66533130 ------CTTACCGGACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110298 11 + 62195757 ------CTTACCGGACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499534 11 - 578057 ------CTTACCAGACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022714 11 - 110113093 ------CTTAGCGGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749281 11 - 92844088 ------CTTAGCGGACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417278 11 + 96509753 ------CTTAGCGGACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888269 11 - 16982598 ------CTTAGCGGACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689878 11 - 3785965 ------CTTAGCGGACT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74470 11 - 179258 ------CTTAGCGGACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560001 11 - 5823884 ------CTTAGCGGACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42604 11 + 372756 ------TTTTGCAGACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279874 11 + 16356641 ------CTTTGCAGACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149130 11 + 1231380 ------CTTTGCAGACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678856 11 + 11732439 ------CTTTGCAGACT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56861194 11 + 57149010 ------CTTGGTGGAGT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22843079 11 + 22939663 ------GTTGGTGGAAT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47605104 17 + 47698779 GTGCCGTGGAGTGGGCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856159 93 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e dasNov3.JH569290 242670 711 - 397369 I a score=469195.000000 s hg38.chr20_KI270870v1_alt 108839 37 + 183433 CTCACAAGTGCTTCTGTGTCAGATGGTTGGAGGCCCA s panTro5.chr20 66435169 37 + 66533130 CTCACAAGTGCTTCTGTGTCAGATGGTTGGAGGCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110309 37 + 62195757 CTCACAAGTGCTTCTGTGTCAGATGGTTGGAGGCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499545 37 - 578057 CTCACAAGTGCTTCTGTGTCAGATGGTTGGAGGCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022725 37 - 110113093 CTCACCAGTGCTTCTGTGTCAGATGGTTGGAGGTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749292 37 - 92844088 CTCACAAGAGCTTCTGTGTCAGATGGTTGGAGGCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417289 37 + 96509753 CTCACAAGAGCTTCTGTGTCAGATGGTTGGAGGCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888280 37 - 16982598 CTCACGAGAGCTTCTGTGTCAGATGGTTGGAGGCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689889 37 - 3785965 CTCACAAGAGCTTCTGTGTCAGATGGTTGGAGGCCCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74481 37 - 179258 CTCACAAGAGCTTCTGTGTCAGATGGTTGGAGGCCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560012 37 - 5823884 CTCACAAGAGCTTCTGTGTCAGATGGTTGGAGGCTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42615 37 + 372756 CTTACAAATGCTTCTGTGTCAAATGGTTGGAGGCCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279885 37 + 16356641 CTTACAAATGCTCCTGTGTCAAATGGTTGGAGGCCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149141 37 + 1231380 CTTACAAATGCTTCTGTGTCAAATGGTTGGAGGCCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678867 37 + 11732439 CTTACAAATGCTTCTGTGTCAAATGGTTGGAGGCCCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56861205 37 + 57149010 CTCACAAGGGCTTCTGTGCCTGATGGCTGGAGGCCCA i micMur3.chr18 C 0 I 211 s proCoq1.NW_012150197v1 1856252 37 - 2029793 CTCACAAGGGCTTCTGTGCCCGATGGTTGGAGGTCCA i proCoq1.NW_012150197v1 I 93 C 0 s otoGar3.GL873542 22843090 36 + 22939663 CTCCTAAGGG-TCCTTTGTCAGATAGTTGCAGGTCCA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47605121 35 + 47698779 CCCACAGAG--TTTTGAGTCTGCTGGTTGGAGGCCCC i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e dasNov3.JH569290 242670 711 - 397369 I a score=760643.000000 s hg38.chr20_KI270870v1_alt 108876 79 + 183433 GTTCGGGGATGAGATGAGAGAA-GGGGTCTTCTACATCCTGAGTCTTCCATTGGCTCGGGATGCAAACAGCAGTTCTGTG s panTro5.chr20 66435206 79 + 66533130 GTTCGGGGATGAGATGAGAGAA-GGGGTCTTCTACATCCTGAGTCTTCCATTGGCTCGGGATACAAATGGCAGTTCTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110346 79 + 62195757 GTTCGGGGATGAGATGAGAGAA-GGGGTCTTCTACATCCTGAGTCTTCCATTGGCTCGGGATACAAATGGCAGTTCTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499582 79 - 578057 GTTCAGGGATGAGATGAGAGAA-GGGGTCTTCTACATCCTGAGTCTTCCATTGGCTCGGGATGCAAACGGCAGTTCTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022762 80 - 110113093 GTTCGGGGATGAGATGAGAGAAGGGGGTCTTCTACATCCTGAGTCTTCCATTGGCTCAGGATGCGAACAGCAGTTCTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749329 80 - 92844088 GCTTGGGAATGAGATGAGAGAAGGGGGTCTTCTACGTCCCGAGTCTTCCATTGGCTCGGGATGCAAACAGCAGTTCTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417326 80 + 96509753 GCTTGGGAATGAGATGAGAGAAGGGGGTCTTCTACGTCCCGAGTCTTCCATTGGCTCGGGATGCAAACAGCAGTTCTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888317 80 - 16982598 GCTTGGGAATGAGATGAGAGAAGGGGGTCTCCTACGTCCCGAGTCTTCCATTGGCTCGGGATGCAAACAGCAGTTCTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3689926 80 - 3785965 GCTTGGGAATGAGATGAGAGAAGGGGATCTTCTACGTCCCGAGTCTTCCATTGGCTCGGGATGCAAACAGCAGTTCTGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74518 80 - 179258 GCTTGGGAATGAGATGAGAGAAGGGGATCTTCTACATCCGGAGTCTTCCATTGGCTCGGGATGCAAACAGCAGTTCTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560049 80 - 5823884 GCTTGGGAATGAGATGAGAGAAGGGCGTCTTCTACGTCCTGTGCCTTCCATTGGCTCGGGATGCAAACGGCAGTTCTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42652 80 + 372756 GTTTGGGGATGAGATAAGAGAAGAGGGTCTCCTGCATCCTGAGTCTTCCATTGGCTCAGGATGCAAACAGCCGTTCTGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16279922 79 + 16356641 GTTTGGGGGTGAGATAAGAGAAGAGGGTCTCCT-CATCCTGAGTCTTCCATTGGCTCAGGATGCAAACAGCCGTTCTGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149178 80 + 1231380 GGTTGGGGATGAGAGAAGAGAAGAGGGTCTCCTGCATCCTGAGTCTTCCCTGGGCTCAGGATGCAAACAGCCGTTCTGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678904 80 + 11732439 GTTTGGGGATGAGATAAGAGAAGAGGGTTTCCTGCATCCTGAGTCTTCCATTGGCTCGGGATGCAAACAGCCGTTCTGTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1856289 78 - 2029793 ATGCGGCCA-GAGATGAGAGAACAGGGTCTTCTACCTCCTGGGTCTTCCAC-GACTCGAGATGCAAACCCTGGTTTTGTG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22843126 77 + 22939663 GTGTGGCCA-GAGGTGAGAGAGCAGGGTCTTTTCCATCCCAAGT-TTTCAT-GACACCACAGGCAGGCTCTGGCTGTATA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47605156 77 + 47698779 ATGTGGCCA-GAGACGAGGGAA-CAGGCTGCCCAGGTCCCACGTCTCCCACTGACTCCAGATGCAGACAGAGGTT-TGTG i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861242 211 + 57149010 I e dasNov3.JH569290 242670 711 - 397369 I a score=329316.000000 s hg38.chr20_KI270870v1_alt 108955 28 + 183433 TGCTGATGACCCG-GCTGGCTGAGCTCTG s panTro5.chr20 66435285 28 + 66533130 TGCTGATGACCCG-GCTGGCTGAGCTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110425 28 + 62195757 TGCTGATGACCCG-GCTGGCTGAGCTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499661 28 - 578057 TGCTGATGACCCG-GCTGGCTGAGCTCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022842 28 - 110113093 TGCTGGTGACGTG-GCTGGCTGAGCTCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749409 28 - 92844088 TGCTGATGACCTG-GCTGGCTGAGCTCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417406 28 + 96509753 TGCTGATGACCTG-GCTGGCTGAGCTCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888397 28 - 16982598 TGCTGACGACCTG-GCTGGCTGAGCTCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3690006 28 - 3785965 TGCTGATGACCTG-GCTGGCTGAGCTCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74598 28 - 179258 TGCTGATGACCTG-GCTGGCTGAGCTCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560129 28 - 5823884 TGCTGATGACCTG-GCTGGCTGAGCTCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42732 28 + 372756 TACTGATGATCTG-GCTGGCTGAGCTCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16280001 28 + 16356641 TGCTGATGATCTG-GCTGGCTGAGCTCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149258 27 + 1231380 TGCTGATGATCTG-GCTGGCTGAGCTCT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2678984 28 + 11732439 TGCTGATGATCTG-GCTGGCTGAGCTCTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1856367 28 - 2029793 TGCTGATGATCTG-GCCTACTGGGCTCTG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22843203 28 + 22939663 TACAGATGGTCTA-GCTGACTGGGCTCTA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47605233 29 + 47698779 TGTTGGGGATCTTCAGTGGCTGAGCTCTA i canFam3.chr24 C 0 I 791 s dasNov3.JH569290 243381 20 - 397369 TGCCCATAACCTG-GCAGGCT-------- i dasNov3.JH569290 I 711 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861242 211 + 57149010 I a score=82820.000000 s hg38.chr20_KI270870v1_alt 108983 10 + 183433 TGACCGTTTC s gorGor5.CYUI01015848v1 499689 10 - 578057 TGACCGTTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022870 10 - 110113093 TGACCGTTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749437 10 - 92844088 TGACCGTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417434 10 + 96509753 TGACCGTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888425 10 - 16982598 TGACCGTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3690034 10 - 3785965 TGACCGTTTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74626 10 - 179258 TGACCATTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560157 10 - 5823884 TGACCGTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42760 10 + 372756 TGACTGTTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16280029 10 + 16356641 TGACTGTTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149285 7 + 1231380 ---CTGTTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2679012 10 + 11732439 TGACTGTTTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1856395 10 - 2029793 TGACGGTTTC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22843231 10 + 22939663 TGACTGTTTC i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 243401 10 - 397369 TGATGGTCTC i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47605262 791 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861242 211 + 57149010 I e panPan2.chr20 62110453 0 + 62195757 C e panTro5.chr20 66435313 0 + 66533130 C a score=665911.000000 s hg38.chr20_KI270870v1_alt 108993 74 + 183433 CTTCCTGCTTCTCAGGGATACAGATTCTCA--------------------GGGCAGGGACCATCT--TACTGTTCAGCAT----ACAATTGAAGAGTGGA s panTro5.chr20 66435313 67 + 66533130 -------CTTCTCAGGGATACAGATTCTCA--------------------GGGCAGGGACCATCT--TACTGTTCAGCAT----ACAATTGAAGAGTGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110453 67 + 62195757 -------CTTCTCAGGGATACAGATTCTCA--------------------GGGCAGGGACCATCT--TACTGTTCAGCAT----ACAATTGAAGAGTGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499699 74 - 578057 CTTCCTGCTTCTCAGGGATACGGATTCTCA--------------------GGGCAGGGACCATCT--TACTGTTCAGCAT----ACAATTGAAGAGTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022880 73 - 110113093 CTTCCTGCTTCTTAGGG-TACAGATTCTCA--------------------GGGCAGGGACCATCA--TATTGTTCAGCAT----ACAATTGAAGAGTGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749447 74 - 92844088 CTTCCTGCTTCTTAGGGATACAGATTCCCA--------------------GGGCAGGGAGCATCT--TATTGTCCAGCAA----ACCATTGAAGAGTGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417444 74 + 96509753 CTTCCTGCTTCTTAGGGATACAGATTCCCA--------------------GGGCAGGGAGCATCT--TATTGTCCAGCAA----ACCATTGAAGAGTGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888435 74 - 16982598 CTTCCTGCTTCTTAGGGATACAGATTCCCA--------------------GGGCAGGGAGCATCT--TATTGTCCAGCAA----ACCATTGAAGAGTGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3690044 74 - 3785965 CTTCCTGCTTCTTAGGGATACAGATTCCCA--------------------GGGCAGGGAGCATCT--TATTGTCCAGCAA----ACCATTGAAGAGTGGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74636 74 - 179258 CTTCCTGCTTCTTAGGGATACAGATTCCCA--------------------GGGCAGGGAGCATCT--TATTGTCCAGCAA----ACCATTGAAGAGTGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560167 74 - 5823884 CTTCCTGCTTCTTAGGGATATAGATTCCCA--------------------GGGCAGGGAGCATCT--TATTGTCCAGCAA----ACAATTGAAGAGTGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42770 72 + 372756 CTCCCTGCTTCTTAGGGATACGGATTCTCA--------------------GGGCAGGGACCATCT----CTGTTCACCAT----ACAATTGAAGAGTAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16280039 72 + 16356641 CTCCCTACTTCTTAGGGATACAGATTCTCA--------------------GGGCAGGGACCATCT----CTGTTCACCAT----ACAATTGAAGAGTAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149292 71 + 1231380 CTCCCTGCGTCTTAGGGATACAGATTCTCA--------------------GGGCAGGGACCATCT----CTGTTCA-CAT----ACAATTGAAGAGTAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2679022 72 + 11732439 CTCCCTGCTTCTTAGGGACACAGATTCTCA--------------------GGGCAGGGACCATCT----CTGTTCACCGT----ACAATTGGAGAGTAGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1856405 94 - 2029793 CTTCCCACTTCTTAGGGGTAAAGGTTCTCATTGATCTGTGAACAGACCCAGGGCAGGGACGGTCT--TACTCTTCACCGC----ACGGTTGTGGAGTGGA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22843241 94 + 22939663 CTTCTCACTACTTAGGGGCACAGATTCTCATTAAACTGTGAACAAATCCTGGGTAGGGATTATCT--TACTCTTCACCCC----ACAGTTTTGGAGTGAA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47606053 74 + 47698779 CTTCCTAATTCTCTGGAGGAAAGATTCTCACTAAACT-------------GGACAGG-----TCT----GGGGCCAGCACTGGAGTTATTGATGGG---- i canFam3.chr24 I 791 C 0 s dasNov3.JH569290 243411 92 - 397369 -TGCCCGTCCTTTAGGAGGAAAGATTCTCATCAGACTGATCAAATCTG--GGGTAGGAGCCACCTGTCCCCGCTCACCGG----ATAGTAGCTGAACGA- i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861242 211 + 57149010 I a score=738627.000000 s hg38.chr20_KI270870v1_alt 109067 72 + 183433 TGGCTTCTGCCAATCAGGAAAATG------------AGAGGACTGCAAAGTTCACTTTGTAAACCTTTTGCAGAGGTGGGAC---------------AG s panTro5.chr20 66435380 72 + 66533130 TGGCTTCTGCCAATCAGGAAAATG------------AGAGGACTGCAAAGTTCACTTTGTAAACCTTTTGCAGAGGTGGGAC---------------AG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110520 72 + 62195757 TGGCTTCTGCCAATCAGGAAAATG------------AGAGGACTGCAAAGTTCACTTTGTAAACCTTTTGCAGAGGTGGGAC---------------AG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499773 72 - 578057 TGGCTTCTGCCAATCAGGAAAATG------------AGGGGACTGCAAAGTTCACTTTGTAAACCTTTTGCAGAGGTGGGAC---------------AG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110022953 72 - 110113093 TGGCTTCTGCCAATCAGGAAAATG------------AGAGGACTGCAAAGTTCACTTTGTAAACCTTTCGCAGAGGTGGGAC---------------AG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749521 65 - 92844088 -------TGCCAATCAGGAAAACG------------AGAGGACTGCAGAGTTCACTTTGTAAACCTTTTGCAGAGGTGGGAC---------------GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417518 65 + 96509753 -------TGCCAATCAGGAAAACG------------AGAGGACTGCAGAGTTCACTTTGTAAACCTTTTGCAGAGGTGGGAC---------------GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888509 65 - 16982598 -------TGCCAATCAGGAAAACG------------AGAGGACTGCAGAGTTCACTTTGTAAACCTTTTGCAGAGGTGGGAC---------------GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3690118 65 - 3785965 -------TGCCAATCAGGAAAACG------------AGAGGACTGCAGAGTTCACTTTGTAAACCTTTTGCAGAGGTGGGAC---------------GG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74710 65 - 179258 -------TGCCAATCAGGAAAACG------------AGAGGACTGCAGAGTTCACTTTGTAAACCTTTTGCAGAGGTGGGAC---------------GG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560241 65 - 5823884 -------TGCCAATCAGGAAAACG------------AGAGGACTGCAGAGTTCACTTTGTAAACCTTTCGCAGAGGTGGGAC---------------AG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42842 70 + 372756 TGGCTTCTGCCAATCCAGAAAATG------------AGAGGCCTGT--AGTTTACTTTGTAAACCTTTCGCAGAGGTGGGAC---------------GG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16280111 70 + 16356641 TGGCTTCTGCCCATCCAGAAAATG------------AGAGGCCTGT--AGTTTACTTTGTAAACCTTTCGCAGAGGTGGGAC---------------AG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149363 70 + 1231380 TGGCTTCTGCCAATCCAGGAAATG------------AGAGGCCTGT--AGTTTACTTTGTAAACCTTTCGCAGAGGTGGGAC---------------AG i cebCap1.NW_016107870v1 C 0 I 175 s aotNan1.NW_018500483v1 2679094 69 + 11732439 TGGCTTCTGCCAATCCAGAAAATG------------AGAGGCCTGT--AGTTTACTTTGTAAACCTTTCGCAGAAGTGGGAC---------------A- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56861453 71 + 57149010 TGGCTGCTGCCAATCAGGAAAATG------------AGAGGGCTGCAAAGTTCTCCTCGCAAACCTTGCACGGAGGTGG-AC---------------AG i micMur3.chr18 I 211 C 0 s proCoq1.NW_012150197v1 1856499 71 - 2029793 TGGCTTCTGCCAGTCAGGAAAATG------------AGAGGACTGCGAAGTTCACCTCG-AAACCTTGCACAGAGGTGGAAC---------------AG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22843335 78 + 22939663 CGGCTTTTGCCAATCAGGGAAATA------------AGA---CCACAAAGTTTTCCTTG------TGGCACAGAGGGGAAACGCAGGGCAGGAGGCAGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47606127 43 + 47698779 TGGCTTTTGCCAATCAGGAAAATG------------AGAGGACCCCAAAGTGTCC-------------------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 243503 83 - 397369 TGGCTTTTGCCATCTGGGCACATGAAGCCCAGAGGCAGAGGGCCACAGGGTCC-CCCAGCAAGCCCCAAGCAGAGAAGGGGC---------------AG i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I a score=106336.000000 s hg38.chr20_KI270870v1_alt 109139 13 + 183433 GAAGACAGTGTCC s panTro5.chr20 66435452 13 + 66533130 GAAGACAGTGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110592 13 + 62195757 GAAGACAGTGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499845 13 - 578057 GAAGACAGTGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110023025 13 - 110113093 GAAGACAGTGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749586 13 - 92844088 GAAGACAGTGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417583 13 + 96509753 GAAGACAGTGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888574 13 - 16982598 GAAGACAGTGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3690183 13 - 3785965 GAAGACAGTGTCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74775 13 - 179258 GAAGACAGTGTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560306 13 - 5823884 GAAGACAGGGTCT i colAng1.NW_012114444v1 C 0 C 0 s micMur3.chr18 56861524 13 + 57149010 GACGACAGTGTCC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1856570 13 - 2029793 GAAGACAGCGTCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22843413 13 + 22939663 GGAGGGCGTGTCT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47606170 8 + 47698779 -----CCGTGTCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 243586 13 - 397369 GAGGCCAGGGGCC i dasNov3.JH569290 C 0 I 151 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e saiBol1.JH378156 16280181 0 + 16356641 C e cebCap1.NW_016107870v1 1149433 175 + 1231380 I e calJac3.chrUn_GL286459 42912 0 + 372756 C e aotNan1.NW_018500483v1 2679163 0 + 11732439 C a score=10500.000000 s hg38.chr20_KI270870v1_alt 109152 1 + 183433 C s panTro5.chr20 66435465 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110605 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499858 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110023038 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749599 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417596 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888587 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3690196 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74788 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560319 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s micMur3.chr18 56861537 1 + 57149010 C i micMur3.chr18 C 0 I 769 s proCoq1.NW_012150197v1 1856583 1 - 2029793 C i proCoq1.NW_012150197v1 C 0 I 1116 s otoGar3.GL873542 22843426 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47606178 1 + 47698779 C i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e dasNov3.JH569290 243599 151 - 397369 I e saiBol1.JH378156 16280181 0 + 16356641 C e cebCap1.NW_016107870v1 1149433 175 + 1231380 I e calJac3.chrUn_GL286459 42912 0 + 372756 C e aotNan1.NW_018500483v1 2679163 0 + 11732439 C a score=644598.000000 s hg38.chr20_KI270870v1_alt 109153 106 + 183433 TCTGACACTTGAGGCCCCGTAACTTGGAGATGAA-GGGGGAGGACTACGGGAGGGAGTTGGGGTGCTGCAAGCCCC------AGGCTCTGCGTCAGTCACACAT----------------CACAGTCT------------------T s panTro5.chr20 66435466 106 + 66533130 TCTGACACTTGAGGCCCCGTAACTTGGAGATGAA-GGGGGAGGACTACGGGAGGGAGTTGGGGTGCTGCAAGCCCC------AGGCTCTGCGTCAGTCACACAT----------------CACAGTCT------------------T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110606 106 + 62195757 TCTGACACTTGAGGCCCCGTAACTTGGAGATGAA-GGGGGAGGACTACGGGAGGGAGTTGGGGTGCTGCAAGCCCC------AGGCTCTGCGTCAGTCACACAT----------------CACAGTCT------------------T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499859 105 - 578057 TCTGACACTTGAGGCCCCGTAACTCGGAGATGAA--GGGGAGGACTACGGGAGGGAGTTGGGGTGCTGCAAGCCCG------AGGCTCTGCGTCAGTCACACAT----------------CACAGTCT------------------T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110023039 106 - 110113093 TCTGACACTTGAGGCCCCGTAACTTGGAGATGAC-GGGGGAGGACTACGGGAGGGAGTTGGGGTGCTGCAAGCCcc------aggctctgcgtcagtcacacat----------------cacagtct------------------t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749600 107 - 92844088 TCCTCTGCTTGAGGCCCCATAACTTGGAGATGAACGGGGCAGGGCTACGGGAGGGAGTTGGGGTGCTGCAAGCCcc------aggctctgcgccagtcacacat----------------cacagtct------------------t i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417597 107 + 96509753 TCCTCTGCTTGAGGCCCCATAACTTGGAGATGAACGGGGCAGGGCTACGGGAGGGAGTTGGGGTGCTGCAAGCCcc------aggctctgcgccagtcacacat----------------cacagtct------------------t i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888588 107 - 16982598 TCCTCTGCTTGAGGCCCCATAACTTGGAGATGAACGGGGCAGGGCTACGGGAGGGAGTTGGGGTGCTGCAAGCCcc------aggctctgcgccagtcacacat----------------cacagtct------------------t i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3690197 107 - 3785965 TCCTCTGCTTGAGGCCCCATAACTTGGAGATGAACGGGGCAGGGCTACGGGAGGGAGTTGGGGTGCTGCAAGCCcc------aggctctgcgccagtcacacat----------------cacagtct------------------t i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74789 107 - 179258 TCCTCTGCTTGAGGCCCCATAACTTGGAGATGAACGGGGCAGGGCTACGGGAGGGAGTTGGGGTGCTGCAAGCCcc------aggctctgcgccagtcacacat----------------cacagtct------------------t i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560320 107 - 5823884 TCCTCTGCTTGAGGCCCCATAACTTGGAGATGAACGGGGCAGGGCTACGGGAGGGAGTTGGGGTGCTGCAAGCCcc------aggctctgcgccagtcacacat----------------cacagtct------------------t i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 42912 112 + 372756 ---------AGGGATGCTGTAACTTGGAGATGAA--GTAGAGGGCTAGGGGAGGGAGCTGGGGTGCTCCAAGCCCC------AGGCCCTGTGTTGGTCACAGACTCTGTGCCTGCCCAGTCAGAGCCC------------------T i calJac3.chrUn_GL286459 C 0 I 65 s saiBol1.JH378156 16280181 112 + 16356641 ---------AGGGAGGCTGTAACTTGGAGATGAC--GTGGAGGGCTAGGGGAGGGAGCTGGGGTGCTCCAAGCCCC------AGGCCCTGTGTTGGTCACAGATGTGGCGCCTGCCCCGTCAGAGCCC------------------T i saiBol1.JH378156 C 0 I 66 s aotNan1.NW_018500483v1 2679163 127 + 11732439 --------GAGGGAGGCTGTAACTTGGAGATGCA--GTGGACGGCTAGGGGAGGGAGCTGGGGTGCTCCAAGCCCC------ATGCCCTGTGTTGGTCACAGAC----TGCCTGCCCGGTCAGAGCCCTGTACCTCTTTGCAGCCAT i aotNan1.NW_018500483v1 C 0 I 42 s otoGar3.GL873542 22843427 93 + 22939663 CCCAGCCCTGGAGGTA--GTAACTTACAGGGCAG--GGGGTGTGGCAGTGGACATAGC----------CGAGCCCC------ACGCTCTGCAGTGTCCCCTCCT----------------GTCAGTCT------------------T i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47606179 105 + 47698779 TCTAACCTTTGAGG--CTGTACATTGGGGACAAA--GGGATGGGGCAC-AGAGGAGGCCAG---ATTCCCAGTCTTGTAGAAGGGCTTGGCAGTGGCTGCACAG----------------CATGGTTT------------------C i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 243599 151 - 397369 I e cebCap1.NW_016107870v1 1149433 175 + 1231380 I a score=277996.000000 s hg38.chr20_KI270870v1_alt 109259 27 + 183433 GATCTCTGGGAAGGTCATGGAAGCACT s panTro5.chr20 66435572 27 + 66533130 GATCTCTGGGAAGGTCATGGAAGCACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110712 27 + 62195757 GATCTCTGGGAAGGTCATGGAAGCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499964 27 - 578057 GATCTCTGGGAAGGTCATGGAAGCACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110023145 27 - 110113093 ggtctctggaaaggtcatggaagcact i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749707 27 - 92844088 gatctttgggaaggtcatggaagcact i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417704 27 + 96509753 gatctctgggaaggtcatggaagcact i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888695 27 - 16982598 gatctctgggaaggtcatggaagcact i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3690304 27 - 3785965 gatctctgggaaggtcatggaagcact i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 74896 27 - 179258 gatctctgggaaggtcatggaagcact i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5560427 27 - 5823884 gatctctgggaaggtcatggaaacact i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 43089 27 + 372756 gatctctgggaatgtcatggaagcact i calJac3.chrUn_GL286459 I 65 C 0 s saiBol1.JH378156 16280359 27 + 16356641 GATCTCTGGGAATGTCATGGAAGTATT i saiBol1.JH378156 I 66 C 0 s cebCap1.NW_016107870v1 1149608 27 + 1231380 GATCTCTGGGAATGTCATGGAAGCATT i cebCap1.NW_016107870v1 I 175 C 0 s aotNan1.NW_018500483v1 2679332 27 + 11732439 GATCTCTGGGAATGTCATGGAAGCATT i aotNan1.NW_018500483v1 I 42 C 0 s otoGar3.GL873542 22843520 27 + 22939663 GGTCTCTGGGAATTTCATGGAAACACT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47606284 16 + 47698779 GCTCTC-----------AGGAGGCGct i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 243599 151 - 397369 I a score=5039078.000000 s hg38.chr20_KI270870v1_alt 109286 650 + 183433 GCCTGGTGATGTTATTATCCTGTTTGTGAAGTGGGGAAAC--GGACTCAG-GGGTTAACCTTCATCTAACCAGAAGAGCTGAATCGCATGTG-CTACTTGCTGGAAGCCCCACCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAAGCTCAGCCAAA-CAGGTCGTGTGCCAGCACTTCCGGTCTGGGGTCCTCAGCATCACACCGGGTGCTCCCCAGAACACAGTCCCCGGAAGCACAGGGGT-CGGCT--CCCTGGAAGGGAGACATTGCCTGCTTGGCCAGCCTGCTGAAGAAGCGGTGATTGCGACGGCGAGAGATGCTCAGAAGGACCCCGAGTAAAGGG-----AAGAGGAGGTGCCACGTGG-AGTCGCC-CAGGGACACGGTGGAGACA----AAGACGGAGGAGAATCCCAGGCGAGGGTGCAGTGAGTGAGGCACAGGAGTTGAGGAAACTCCAGGCTTTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTCGAAAAGGCAAATACAAATGGCAGGGTGCTCTCTTGTAGCTTTGAAACAGCAGAAGGAAAAGTGACTCT-CAAATAGATTTGTTCGTTTTTAAACATTCTGAGAG--GAC-------CTGTCCAGT-----CTAAGTGA-GGGGTTCTGTGAGCATTTGGATTTTGACGCCCTCAT-------------------CATGAGCCTTG s panTro5.chr20 66435599 650 + 66533130 GCCTGGTGATGTTATTATCCTGTTTGTGAAGTGGGGAAAC--GGACTCAG-GGGTTAACCTTCATCTAACCAGAAGAGCTGAATCGCATGTG-CTACTTGCTGGAAGCCCCACCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAAGCTCAGCCAAA-CAGGTCGTGTGCCAGCACTTCCGGTCTGGGGTCCTCAGCATCACACCGGGTGCTCCCCAGAACACAGTCCCCGGAAGCACAGGGGT-CGGCT--CCCTGGAAGGGAGACATTGCCTGCTTGGCCAGCCTGCTGAAGAAGCGGTGATTGCGACGGCGAGAGACGCTCAGAAGGGCCCCGAGTAAAGGG-----AAGAGGAGGTGCCACGTGG-AGTCGCC-CAGGGACACGGTGGAGACA----AAGACGGAGGAGAATCCCAGGCGAGGGTGCAGTGAGTGAGGCACAGGAGTTGAGGAAACTCCAGGCTTTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTCGAAAAGGCAAATACAAATGGCAGGGTGCTCTCTTGTAGCTTTGAAACAGCAGAAGGAAAAGTGACTCT-CAAATAGATTTGTTCGTTTTTAAACATTCTGAGAG--GAC-------CTGTCCAGT-----CTAAGTGA-GGGGTTCTGTGAGCATTTGGATTTTGACGCCCTCAT-------------------CATGAGCCTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62110739 650 + 62195757 GCCTGGTGATGTTATTATCCTGTTTGTGAAGTGGGGAAAC--GGACTCAG-GGGTTAACCTTCATCTAACCAGAAGAGCTGAATCGCATGTG-CTACTTGCTGGAAGCCCCACCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAAGCTCAGCCAAA-CAGGTCGTGTGCCAGCACTTCCGGTCTGGGGTCCTCAGCATCACACCGGGTGCTCCCCAGAACACAGTCCCCGGAAGCACAGGGGT-CGGCT--CCCTGGAAGGGAGACATTGCCTGCTTGGCCAGCCTGCTGAAGAAGCGGTGATTGCGACGGCGAGAGACGCTCAGAAGGGCCCCGAGTAAAGGG-----AAGAGGTGGTGCCACGTGG-AGTCGCC-CAGGGACACGGTGGAGACA----AAGACGGAGGAGAATCCCAGGCGAGGGTGCAGTGAGTGAGGCACAGGAGTTGAGGAAACTCCAGGCTTTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTCGAAAAGGCAAATACAAATGGCAGGGTGCTCTCTTGTAGCTTTGAAACAGCAGAAGGAAAAGTGACTCT-CAAATAGATTTGTTCGTTTTTAAACATTCTGAGAG--GAC-------CTGTCCAGT-----CTAAGTGA-GGGGTTCTGTGAGCATTTGGATTTTGACGCCCTCAT-------------------CATGAGCCTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 499991 650 - 578057 GCCTGGTGATGTTATTATCCTGTTTGTGAAGTGGGGAAAC--GGATTCAG-GGGTTAACCTTCATCTAACCAGAAGAGCTGAATCGCATGTG-CTACTTGCTGGAAGCCCCACCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAAGCTCAGCCAAA-CAGGTCGTGTGCCAGCACTTCCGGTCTGGGGTCCCCAGCATCGCACGGGGTGCTCCCCAGAACACAGTCCCCGGAAGCACAGGGGT-CGGCT--CCCTGGAAGGGAGACATTGCCTGCTTGGCCAGCCTGCTGAAGAAGCGGTGATTGTGATGGCGAGAGATGCTCAGAAGGGCCCCAAGTAAAGGG-----AAGAGGAGGTGCCACGTGG-AGTCGCC-CAGGGACACGGTGGAGACA----AAGACGGAGGAGAATCCCAGGCGAGGGTGCAGTGAGTGAGGCACAGGAGTTGAGGAAACTCCAGGCTTTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTTGAAAAGGCAAATACAAATGGCAGGGTGCTCTCTTGTAGCTTTGAAACAGCAGAAGGAAAAGTGACTCT-CAAATAGATTTGTTCGTTTTTAAACATTCTGAGAG--GAC-------CTGTCCAGC-----CTAAGTGA-GGGGTTCTGTGAGCATTTGGATTTTGACGCTGTCAT-------------------CATGAGCCTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110023172 654 - 110113093 gcctggtgatgttattatcctgtttgtgaagtggggaagctgagactcag-gggttaaCCTTCATCTAACCAGAAGAGCTGAACGGCATGTG-CTACTTGCTGGAGGCCCCACCCTGGGTAACGG--GCGGGAGGGGTGGGGTGGAACCTCAGCCAAACCAGGTCGTGTGCCGGCACTTCCGGTCTGGTGTCCTCAGCATGCCACTGGGTGCTCCCCAGAACACAGTCCCCCGAAGCACAGGGGT-CGGCT--CCCTGGAAGGGAGACATTGTCTGCTTGGCCGGCTTGCTGAAGAAGCAGTGATTGCGATGGCGAAAGATGCTCAGAAGGGCCCCGAGTAAAGGG-----AAGAGGAGGTGCCACGTGGCAGCCGCC-CAGGGACACGGTGGAGACA----GAGACGGAGGAGAATCCCAGGCGAGGGCGCAGTGAGTGAGGCACAGGAGTTGAGGAAACTCCAGGCTTTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTTGAAAAGGCAAATACAAATGGCAGGGTGCTATCTTGTAGCTTTGAAACAGCGGAAGGAAAAGTGACTCT-CAAATAGATTTGTTTGTTTTGAAACATTCTGAGAG--GAC-------CTGTCCAGC-----CTAAGTGA-GGGGTTCTGTGAGCGTTTGGATTTTGACGCCCTCAT-------------------CATGAGCCTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92749734 606 - 92844088 gccttgtgatgttattatcctgtttgtgaagtgcggaaactgagactcag-gggttaaCCCTCCTCTA-----AGGCGCTGAATATCATGTG-CTACCTGCTGGAAGCCCCGCCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAACCTCAGCCAAACCAGATCGTGTGCCAGCACTTCCGGTCAGGTGTCCTCAGCAACCCACTGGGTGCTCCCCAGAACACAGTCCCCCGAAGC-----------------------------ACACTGTCTGCTTGGCCAGCCTGCTGAGGAAGCAGTGAGTGCAATGGCG--AGATGCTCAGAGGGGCCCCGAGAAAAGGG-----AAGAGGAGGTGCCACGTGGCCGTCGCC-CGGGGACACGGTGCAGACA----AAGATGGAGGACAGTCCCAGGCGAG--------------GACACAGGAGTAGAGGAAACTCCAGGC-TTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTTGAAAAGGCAAATACAAATGGCTGGGTGCTCTCTTGTAGATTTGAAACAGCGGAAGAAAAAATGACTCT-CGAATAGATTTGTTTGTTTTGAAACGTTCTGAGAG--GAC-------CTGTCCAGC-----CTAAGTGA-GGGGTTCTGTGAGCATTTGGATTTTGACACCCTCGT-------------------CACTAGCCTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96417731 605 + 96509753 gccttgtgatgttattatcctgtttgtgaagtgcggaaactgagactcag-gggttaaCCCTCCTCTA-----AGGCGCTGAATCACATGTG-CTACCTGCTGGAAGCCCCGCCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAACCTCAGCCAAACCAGATCGTGTGCCAGCACTTCCGGTCAGGTGTCCTCAGCAACCCACTGGGTGCTCCCCAGAACACAGTCCCCCGAAGC-----------------------------ACACTGTCTGCTTGGCCAGCCTGCTGAGGAAGCAGTGAGTGCAATGGCG--AGATGCTCAGAGGGGCCCCGAGAAAAGGG-----AAGAGGAGGTGCCACGTGGCCGTCGCC-CGGGGACACGGTGGAGACA----AAGATGGAGGACAGTCCCAGGCGAG--------------GACACAGGAGTAGAGGAAACTCCAGGC-TTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTTGAAAAGGCAAATACAAATGGCTGGGTGCTCTCTTGTAGATTTGAAACAGCGGAAGAAAAAATGACTCT-CGAATAGATTTGTTTGTTTTGAAACGTTCTGAGAG--GAC-------CTGTCCAGC-----CTAAGTGA-GGGGTTCTGTGAGCATTTGGA-TTTGACACCCTCAT-------------------CACTAGCCTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16888722 606 - 16982598 gccttgtgatgttattatcctgtttgtgaagtgcggaaactgagactcag-gggttaaCCCTCCTCTA-----AGGCGCTGAATCACATGTG-CTACCTGCTGGAAGCCCCGCCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAACCTCAGCCAAACCAGATCGTGTGCCAGCACTTCCGGTCAGGTGTCCTCAGCAGCCCACTGGGTGCTCCCCAGAACACAGTCCCCCAAAGC-----------------------------ACACTGTCTGCTTGGCCAGCCTGCTGAGGAAGCAGTGAGTGCAATGGCG--AGATGCTCAGAGGGGCCCCGAGAAAAGGG-----AAGAGGAAGTGCCACGTGGCCGTCGCC-CGGGGACACGGTGGAGACA----AAGATGGAGGACAGTCCCAGGCGAG--------------GACACAGGAGTAGAGGAAACGCCAGGC-TTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTTGAAAAGGCAAATACAAATGGCTGGGTGCTCTCTTGTAGATTTGAAACAGCGGAAGAAAAAATGACTCT-CGAATAGATTTGTTTGTTTTGAAACGTTCTGAGAG--GAC-------CTGTCCAGC-----CTAAGTGA-GGGGTTCTGTGAGCATTTGGATTTTGACACCCTCGT-------------------CACTAGCCTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3690331 632 - 3785965 gccttgtgatgttattatcctgtttgtgaagtgcggaaactgagactcag-gggttaaCCCTCCTCTA-----AGGCGCTGAATCACATGCG-CTACCTGCTGGAAGCCCCGCCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAACCTCAGCCAAACCAGATCGTGTGCCAGCACTTCCGGTCAGGTGTCCTCAGCAACCCACCGGGTGCTCCCCAGAACACAGTCCCCCGAAGCACAGGGGC-CGGCT--CCCTGGAAGGGAAACACTGTCTGCTTGGCCAGCCTGCTGAGGAAGCAGTGATTGCAATGGCG--AGACGCTCAGAGGGGCCCCGAGAAAAGGG-----AAGAGGAGGTGCCACGTGGCAGTCGCC-CGGGGACACGGTGGAGACA----AAGATGGAGGATAGTCCCAGGCGAG--------------GACACAGGAGTAGAGGAAACTCCAGGC-TTTTTGGTAACAGATGGAG-T-GCGGAGGAAGTTGAAAAGGCAAATACAAATGGCTGGGTGCTCTCTTGTAGATTTGAAACAGCGGAAGAAAAAATGACTCT-CAAATAGATTTGTTTGTTTTGAAACGTTCTGAGAG--GAC-------CTGTCCAGC-----CTAAGTGA-GGGGTTCTGTGAGCATTTGGATTTTGACACCCTCGT-------------------CACTAGCCTTG i cerAty1.NW_012001373v1 C 0 I 341 s manLeu1.NW_012101652v1 74923 632 - 179258 gccttgtgatgttattatcctgtttgtgaagtgcggaaactgagactcag-gggttaaCCCTCCTCTA-----AGGCGCTGAATCACGTGCG-CTACCTGCTGGAAGCCCCGCCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAACCTCAGCCAAACCAGATCGTGTGCCAGCACTTCCGGTCAGGTGTCCTTAGCAACCCACCGGGTGCTCCCCAGAACACAGTCCCCCGAAGCACAGGGGC-CGGCT--CCCCGGCAGGGAGACACTGTCTGCTTGGCCAGCCTGCTGAGGAAGCAGTGATTGCAATGGCG--AGACGCTCAGAGGGGCCCCGAGAAAAGGG-----AAGAGGAGGTGCCACGTGGCAGTCGCC-CGGGGACACGGTGGAGACA----AAGATGGAGGATAGTCCCAGGCGAG--------------GACACAGGAGTAGAGGAAACTCCAGGC-TTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTTGAAAAGGCAAATACAAATGGCTGGGTGCTCTCTTGTAGATTTGAAACAGCGGAAGAAGAAATGACTCT-CGAATAGATTTGTTTGTTTTGAAACGTTCTGAGAG--GAC-------CTGTCCAGC-----CTAAGTGA-GGGGTTCTGTTAGCATTTGGATTTTGACACCCTCGT-------------------CACTAGCCTTG i manLeu1.NW_012101652v1 C 0 I 340 s colAng1.NW_012114444v1 5560454 634 - 5823884 gccttgtgatgttattatcctgtttgtgaagtggggaaactgagactcag-gggttaaCCCTCCTTTAACCAGAAGAGCTGAATCACAT--G-CTACCTGCTGGAAGCCCCGCCCTGGGTAACAG--GTGGGAGGGGTGGGGTGGAACCTCAGCCAAACCAGGTCGTGTGCCAGCACTTCCGGTCAGGTGTCCTCAGCAACCCACCGGGTGCTCCCCAGAACACAGTCCCCCGAAGCACAGGGGC-CGGCT--CCCTGGAAGGGAGACACTATCTGCTTGGCCAGCCCGCTGAGGAAGCAGTGATTTC-ATGGCG--GGATGCTCAGAGGGGCCCCGAGAAAAGGA-----AAGAGGAGGTGCCACGTGGCAGTCGCC-CGGGGACACGGTGGAGACA----AAGATGGAGGAGAGTCCCAGACGAG--------------GGCACAGGAGTAGAGGAAACTCCAGGC-TTTTTGGTAACAGATGGAG-T-GTGGAGGAAGTTGAAAAGGCAAATACAAATGGCTGGGTGCTCTCTTGTAGATTTGAAACAGCAGAAGAAAAAATGACTTT-CGAATAGATTTGTTTGTTTTGAAACGTTCTGAGAG--GAC-------CTGTCCAGC-----CTAAGTGA-GGGGTTCTGTGAGCATTTTGATTTTGACACCCTCGT-------------------CACTAGCCTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 43116 649 + 372756 gcctggtg-tgttaccaccccgtttgtgaagtggggaaaccaagactcag-ggaTTCACCCTCACCTAACCAGAAGAGCTGTATCACATGGG-CTACTTGCTGGAAGCCCCACCCTGGGTAACAG--GTGGGAGAGGCGGGGTGGAACCTCAGACAAACCAGGTTATGTGGCAGCACTTGTGGTCTGGTGTCCTCCGCATCCCA-TGGGTGCTCCCCAGAACATAGCCCCCCAAAGCACAGGGGT-CGGCT--CCCTGGAAGGGGGACACTGTCTGCTTGGCCAGCCTGCTGAGGAAGCAGTAATTGCGATGCCGAGAGATACTCAGAAGGACCCTGAGAAAAGGG-----CAGAGGAGGTGCCAGGTGGCATTTGCC-TGGAGACACCGTGGAGGCA----AAGACAGAGAAGAATCCCGAGCAAGGGTGCAGCAAGTGAGGCACAGGAGTTGCGGAAACTCCAGGCCTTTTGGGTAACAGATGGAG-T-GTGGAGGAAGCTGAAAAGGCAAATACAAATGGCTGGGTGCTCCCTTGTAGCTTTGAAACAGCAGAAGGAAAAATGACTCT-CAAATAGATTTGTCTGTTTTGAAACATTCTGAGAG--GAC-------CTATCCAGC-----CTAACTGAGGGGGTTCTGTGAGCATTTAGATTTTGACACCCTCAT----------------------TAGTCTG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16280386 629 + 16356641 GCCTGGTG-TGTTATCACCCTGTTTGTGAAGTGGGGAGACCGAGACTCAG-GGATTCACCTTCACCTAACCAGAAGAGCTGAATCGCATGGG-CTACTTGCTGGAAGCCCCACCCAGGGTAGCAG--GTGGGAGAGGCGGGGTGGAATCTCAGCCGAACCAGGTCACGTGGCAGCACTTGTGGTC--------------------TGGGTGCTCCCCAGAACACAGTCCTCCAAAACACAGGGGT-CAGCT--CCCTGGAAGGGGGACACTGTCTGCTTGGCCAGCCTGCTGAGGAAGCAGTCATTGCGATGCCGAGAGATACTCAGAAGGGCCCCGAGAAAAGGG-----CAGAGGGGGTGCCAGGTGGCATTTGCC-TGGTGACATGGTGGAGACA----CAGACGGAGAAG-ATCCTGGGTGAGCGCGCAGCGAGTGAGGCACAGGAGCTGAGGGAACTCCAGGCTTTTTGGGTGACAGATGGAG-T-GTGGAGGAAGCTGAAACGGCAAATACAAATGGCTGGGTGCTCCCTTGTAGCTCTGAAACAGCAGAAGGAAAAATGACTCT-CAAATAGAATTGTTTGTTTTGAAACATTCTGAGAG--GAC-------CTGTCCAGC-----CTAACTGACGGGGTTCTGTAAGCATTTAGATTTGGACGCCCTCAT----------------------TAGTCTG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1149635 628 + 1231380 GCCTGGTg-tgttatcaccccgtttgtgaagtggggaaaccgagactcag-ggaTTCACCTTCACCTAACCAGAAGGGCTGAATCACATGGG-CTACTTGCTGGAAGCCCCACCCTGGGTAACAG--GTGGGAGAGGCAGGGTGGAACCTCAGCCAAACCAGGTCATGTGGCAGCACTTGTGGTC-AGTGTCCTCCGCACCCC--TGGGTGCTCCCCAGAACACGGTCCCCCAAAGCACAGGGGT-CGGCT--CCCTGGAAGGGGGACACTCTCTGCTTGGCCAGCCTGCTGAGGAAGC-----------------GAGATACTCAGAAGGGCCCTGAGAAAAGGG-----CAGAGGAGGTGCC-GGTGGCATTTGCC-CGGAGACATGGTGGAGACG----GAGACGGAGACG-ATCCCGGGTGAGTGCGCAACGCGTGAGGCACAGGAGCTGAGGAAACTCCGGGCTTTTTGGGTGACAGATGGAG-T-GTGGAGGAAGCTGGAAAGGCAAATACAAATGGCTGGGTGCTCCCTTGTAGCTTTGAAACAGCAGAAGGAAAAATGACTCT-CAAATAGATGTGTTTGTTTTGAAACATTCTGAGAG--GAC-------CTATCCAGC-----CTAACTGAGGGGGTTCTGTGAGCATTTGGATTTGGACACCCTCAT----------------------TAGTCTG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2679359 626 + 11732439 GCCTGGTG-TGTTATCACCCCATTTGTGAAGTGGGGAAACCGAGACTCAG-GGATTCAGCTTCACGTAACCAGAAGAGCTGAATCACGTGGG-CTACTTGCTGGAAGCCCCACCCTGGGTAACAG--GTGGGAGAGGC-GGGTGGAATCTCAGCCAAACCAGGTCGTGTGGCAGCACTTGTGGTCTGGTGTCTGCCACATTCCT-GGGGTGCTCCCCGGAACACAGCCCCCCAAAGCACAGGGGC-TGGCT--CCCTGGAAGGGGG-CACCATCTGCTCGGCCAGCCTGCCAAGGAAGCAGTAATTGCGATGCCGAGAGATACTCAGAAGGACCCCGAGAAAAGGG-----CAGAGGAGGTGCCAGGTGGCGTTTGCC-TGGAGACACGGTGG-GTCG----AAGACGGAGAAGAATCCCGGGCGAG--------------GACGCAGGAGCTGAGGAAACTCCAGGCTTTTTGGGGAACAGAT-GAG-T-GTGGAGGAAGCTGAAAAGGCAAATACCAGTGGCTGGGTGCTCCCTCGTAGCTTTGAAAAAGCAGAAGGAAGAATGACTCT-CAAATAGA----TTTGTTTTGAAACATTCTGAGAG--GAC-------CTGTCCAGC-----CTAACTGA-GGGGTTCTGTGAGCATTTAGATTTCGACGCCCTCAT----------------------TAGTCTG- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22843547 567 + 22939663 GCCTGACAGTGTTATCATCCCATTTTTGAAAT-----------------G-GGGTTAAAGTTTATCCAACTGGAAGAGCTGA------CACT-CTACTC-CTGGAAGCCCACCCCTGGATCACAGGTGTGGGGGAGATGTGCTG------CAGCCACA----------TACCAGCA-TTCTGGTC-------CTCAGGGCTT---TGTGTACCCCTCA-AACACAG-------------AGGGGTCCAGCT--CCCTGCAGGGGAGATACTGCCTGATGGCCTAAAGTGCTGAGGAAGTAGAGACTATGATGCCACCCGACACTTGGAGAG--CCCAGGGAAAGGG-------GAGGAGGTGCCCCACTACATTTGCC-TGGGGACCTTTCGGGGGCAGGACAAGCTGTCCTAGGCTCTCGGCTTAGGACTT---------GATCCTGGGTTCAAGGATGCTCTAGGT---TTTGGTAGCTGTTTAAG-T-TCTGGTAGAGTTGGAAAGGCAAATCCAAATGGCTGGGTGTTCTTTTATAATTTTGAAACAGTGGAAAAAAAAATGACT-------------TGTTTGTTTTGAAACATTCTGAGAGAAGAC-------TCAGTCAGC-----CTAAGTCA-GGGGTTGTGTGGGCATCTGGACTCTGCTACCTTCAT----------------------TAATCTTG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47606300 491 + 47698779 gcctggtgctgttattaccccgtgtgtgaagtggggaaactgagtctcagagggttcacgtttgacca-----aggagctgggtcacacact-gtac-tgctcagagcccag-cctaaatcacag--gGTGCAGGG--------------CAGCCAAACCAGGCCA-GTGGAAG------------------------------------GCCCCCCAACA---GGCTCCCTGGAGGGGAGGTGG-CCGCTGACGCCAGCGGGTGCCCTCTGACCGGTGGACCAGT-------------------------------AGGTGCTCAAAGGGCC--------AGGGGCTTCCAGGAGGAGGTGCTTC-------TTCCC-CTGGGCCACGT----GTTC----AGCAGGGAGGCGTCTTCAGGAC-------------------------AGTGGAGGGAG----GGGC----TGGGCGACAGGTGAAGCC-ACCCAGGAGCTTGCAGAGACAGATCCGAAGAGCGAGCTTCTCTCTTGTAATTTTGAAACAGCAGAAGCCAAAATGCCTCTGCAGACAGA----ACTGGTTTGGAGCAGTCTGCGGG--------------GTCTGGG-----CTGCG----GGGATTGCGTGCGC-----GCCTCTGTCCGCCGCG------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 243750 564 - 397369 GCCTGGTGCCCGAGGCTCCCTGTTGGTG--GGGGGATAATCGAGGCTTGG-AGG---GCTTGAAGTTGTCCAGAA------AATCACATCTGACTGCTTGCTCAGACC--------------CAG--CTGGG---------------------------------------------CTCCGGTTTCTGGCCCTCGGTTCCC-----AGGGCTCCCCGGAGCACAACTTCCCGAGGC--AGGGGC-TGGCA--CGGTG---------CGTCGTC-----------CCTGTGGAAGGGCAGGTGATGACGACACCGAGCAATGCTTGTGGCAGCC----GGCAAGCA-----CAGAGGA--CCACATGTGGTGTCTGCCTCGGGGACATCTTGGGGACA----CTGGGGGAGCGGGGCACTGTGCAGG------------GAGGTTCTGG-GCCTTGGAAACAGCAGGTAACGTGGATGATGGGTGGCG-CAGTGGCGCAAGTCAGGAAGGCCAGC-CTGCTGGTTCGGCCCGGGTTTCCTGGGTTAAAAT----GCAGGAGAGGGCACCTC-TGGGCAGGCTTGTTGGTTCAGAAGC--TGCGGGAG--GACTGGGCTGCTTCCCCGTGAGCGCCGAGTGA-CAGG-ACAGCGAGCCTCGGGCTGAGGGTGTCCCCGGGAGGCTGCAGCCACTTCTACGTGAGCATCT i dasNov3.JH569290 I 151 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I a score=170150.000000 s hg38.chr20_KI270870v1_alt 109936 31 + 183433 ---------TGGTCTCAACTGACATATTTGGTAATAGTGA s panTro5.chr20 66436249 31 + 66533130 ---------TGGTCTCAACCGACATATTTGGTAATAGTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111389 31 + 62195757 ---------TGGTCTCAACCGACATATTTGGTAATAGTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 500641 31 - 578057 ---------TGGTCTCAACCTACATATTTGGTAATAGTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110023826 31 - 110113093 ---------TGGTCTCAACCTACATGTTTGGTAATAGTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750340 30 - 92844088 ---------AGGTCT-AACCTACATGCTTGGTAAGAGTAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418336 30 + 96509753 ---------AGGTCT-GACCTACATGCTTGGTAAGAGTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889328 30 - 16982598 ---------AGGTCT-AACCTACATGCTTGGTAAGAGTAA i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5561088 30 - 5823884 ---------AGGTCT-AACCTACATGCTTGGTAAGAGTAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 43765 31 + 372756 ---------TGCTCCCAACCTATTTACTTGGTAATAGTGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281015 31 + 16356641 ---------TGCTCCCAACCTATTTACTTGGTAATAGTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150263 31 + 1231380 ---------TGCTCCCAACCTATTTACTTGGTAATAGTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2679985 31 + 11732439 ---------TGCTCCCAACCTATTTACTTGGTAATCGTGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22844114 31 + 22939663 ---------TGATCTCAATCTAACTACTTGGTGGTGCTGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47606791 28 + 47698779 ---------TGGTCTCAATCTGCGTACTTGGGAATAG--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 244314 40 - 397369 GGATTGCGTCCACCTTCACCAGCTTACCTGGAACTCGTGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e cerAty1.NW_012001373v1 3690963 341 - 3785965 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e manLeu1.NW_012101652v1 75555 340 - 179258 I a score=1403014.000000 s hg38.chr20_KI270870v1_alt 109967 173 + 183433 GACCCTTAAACTTTTTAATGGAGAAACT-AGGGGAAATGTGTTGACATCTAGTGTTCCAACAATAATTTCTTCAGCAATTCTTCATTGCTAACATGCAATGTGAT-GCTTAGAGTAAAATAGGACAAAGATTATGTTCCAAGGAATCAA------------ATACATTCTGCACGGAAGGTACCATT s panTro5.chr20 66436280 168 + 66533130 GACCCTTAAACTTTTTAATGGAGAAACT-AGGGGAAATGTGTTGACATCTAGTGTTCCAACAATAATTTCTTCAGCAATTCTTCATTGCTGACAAG-----TGAT-GCTTAGAGTAAAATAGGACAAAGATTGTGTTCCAAGGAATCAA------------ATACATTCTGCACGGAAGGTACCATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111420 168 + 62195757 GACCCTTAAACTTTTTAATGGAGAAACT-AGGGGAAATGTGTTGACATCTAGTGTTCCAACAATAATTTCTTCAGCAATTCTTCATTGCTGACAAG-----TGAT-GCTTAGAGTAAAATAGGACAAAGATTATGTTCCAAGGAATCAA------------ATACATTCTGCACGGAAGGTACCATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 500672 168 - 578057 GACCCTTAAACTTTTTAATGGAGAAACT-AGGGGAAATGTGTTGACATCTAGTCTTCCAACAGTAATTTCTTCAGCAATTCTTCATTGCTGCCAAG-----TGAT-GCTTACAGTAAAATAGGACAAAGATTATGTTCCAAGGAATCAA------------ATACATTCTGCATGGAAGGTACCATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110023857 169 - 110113093 GACCCGTAAACTTTTTAATGGAGGAACTGGGGGGAGATGTGCTGACATCTAGTGTTCCAACAACAATTTCTGCAGCAATTCTTCATTGCTGACAAG-----GGAT-GCTTAGAGTAAAATAGAACAAAGATGATGTTCCAAGGAATCAA------------ATACATTCTGCGTGGGAGGTACCATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750370 169 - 92844088 GACCCTTGATCTTTTTAATGGAGAGACTCGGGGAAAACATGTTGACGTCTCGTGTTCCAACAGCAATTTCTTCACCAATTCTTCATTGCTGACAAG-----TGAT-GCTTAGAGTAAAATCGAACAAAGATTATGTTCCAAGGAATCAA------------ATACACTCTGCACAGAAGGTACCATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418366 169 + 96509753 GACCCTTGATCTTTTTAATGGAGAGACTCGGGGAAAACATGTTGACGTCTCGTGTTCCAACAGCAATTTCTTCACCAATTCTTCATTGCTGACAAG-----TGAT-GCTTAGAGTAAAATCGAACAAAGATTATGTTCCAAGGAATCAA------------ATACACTCTGCACAGAAGGTACCATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889358 169 - 16982598 GACCCTTGATCTTTTTAATGGAGAGACTCGGGGAAAACATGTTGACGTCTCGTGTTCCAACAGCAATTTCTTCACCAATTCTTCATTGCTGACAAG-----TGAT-GCTTAGAGTAAAATCGAACAAAGATTATGTTCCAAGGAATCAA------------ATACACTCTGCACAGAAGGTACCATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691304 169 - 3785965 GACCCTTGATCTTTTTAATGGACAGACTCGGGGAAAACATGTTGACATCTCGTGTTCCAACAGCAATTTCTTCACCAATTCTTCATTGCTGACAAG-----TGAT-GCTTAGAGTAAAATCGAACAAAGATTATGTTCCAAGGAATCAA------------ATACACTCTGCACAGAAGGTACCATG i cerAty1.NW_012001373v1 I 341 C 0 s manLeu1.NW_012101652v1 75895 169 - 179258 GACCCTTGATCTTTTTAATGGACAGACTCGGGGAAAACATGTTGACGTCTCGTGTTCCAACAGCAATTTCTTCACCAATTCTTCATTGCTGACAAG-----TGAT-GCTTAGAGTAAAATCGAACAAAGATTATGTTCCAAGGAATCAA------------ATACACTCTGCACAGAAGGTACCATG i manLeu1.NW_012101652v1 I 340 C 0 s colAng1.NW_012114444v1 5561118 169 - 5823884 GTCCCTTGATCTTTTTAATGGAGAAACTCAGGGAAAACATGTTGACGTCTCGTGTTCCAACAGCAATTTCTTCACTAATTCTTCATTGCTGACAAG-----TGAT-GCTTAGAGTAAAATCGAACAAAGATTATGTTCCAAGGAATCAA------------ATACACTCTGCGCGGAAGGTACCACG i colAng1.NW_012114444v1 C 0 I 313 s calJac3.chrUn_GL286459 43796 169 + 372756 GACTCTGAAACTTTTTAATGGAGAAACTATGGGGAAATATGTTGACATCTAGTGTTCCAACAACAATTTATTCAGCAATTTTTCATGGCTGAAAAG-----TGAT-GCTTAGAGGAAAATAGAACAAAGATTATGTTCCAAGGAATCAG------------ATGCATTCTGCACGGAAGCTGCTGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281046 169 + 16356641 GACTCTGAAACTTTTTAATGGAGAAACTAGGGGGAAATATGTTGACATCTAGTGTTCCAACAACAACTTATTCAGCAATTTTTCATGGCTGAAAAG-----TGAC-GCTTAGAGGAAAATAGAACAAAGATTATGTTCCAAGGAATCAA------------ATGCATTCTGCGTGGAAGGTGCCGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150294 167 + 1231380 GACTC--AAACTTTTTAACGGAGAAACTAGGGGGAAATATGTTGACATTTAGTGTTCCAACGACAATTTATTCAGCAATTTTTCACGGCTGAAAAG-----TGAC-ACTCAGAGGAAAATAGAACAAAGACGATGTTCCAAGGAATCAA------------ATGCTTTCTGCACGGAAGGTGCCATT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680016 169 + 11732439 GACTCTGAAACTTTTTAATGGAGAAACTAGGGGGAAATATGTTGACATCTGGTGTTCCAACAACCATTTATTCAGCAATTTTTCATGACTGAAAAG-----TGAT-GCTTACAGGAAAATAGAACAAAGATTATGTTCCGAGGAATCAA------------ATGCGTTCTGCGTGGAAGGTGCCGTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22844145 172 + 22939663 GACCCTCAAATTTTATAATGGAGAAGCT--GGGGCAAGGGCATACTGTCCTGTGTTCTGACAACAATTTCTTCAGCAGTTCTTTGTTTTTGAAAAG-----TGCT-ACTTGG-------Tggctcggcacctgtggctcaagtggctaaggtgcctgccacatacatctgagctggagggtttgaat i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47606819 141 + 47698779 -ACTGTTACGGTTTTTAA-GGGGAAACTAGGGACAGACGCATCGATGTCTAATGTTTTAGCAACTATGTCTTCAGCCTTCCTCGTGTTTTGGGGAA-----CGGCAGCTTGGCGTAAAGCGG------------------AGAAGTCTA---------------CGCTCTGCCCGGATGGT------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 244354 138 - 397369 GGCCCCGAGGCTTTTAAATGGAGGAATTTGGGATGAACGTGGTGCCGTCCAGTGTTGAAGCAACATCCC------------------GTGGAAAAT-----CGAT-GCTTCAGGCCCAATGGTACAACG-CTGTGTCCAGGGTCAGCTA------------A------------GGGGAGGGCCGCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I a score=604608.000000 s hg38.chr20_KI270870v1_alt 110140 67 + 183433 CATTCCTGTATTCTCAAACATCTGTTGGCCA-CACGCTTCA-CGTGGGCAT-GCCTGTGGCTCGTGCTGG s panTro5.chr20 66436448 67 + 66533130 CATTCCTGTATTCTCAAACATCTGTTGGCCA-CACGCTTCA-CGTGGGCAT-GCCTGTGGCTCGTGCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111588 67 + 62195757 CATTCCTGTATTCTCAAACATCTGTTGGCCA-CACGCTTCA-CGTGGGCAT-GCCTGTGGCTCGTGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 500840 67 - 578057 CATTCCTGTATTCTCAAACATCTGTTGGCCA-CACGCTTCA-CGTGGGCAT-GCCTGTGGCTCGTGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024026 67 - 110113093 CATTCCTGTATTCTCAAACATCTGTTGGCCA-CACGCTTCA-CGTGGGCGT-GCCTGTGGCTCGTGCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750539 67 - 92844088 CATTCCTGGGTTCTCAAACATCTGTTGGCCA-CACACTCCA-CGTGGGCAT-GCCTGTGGCTCGTGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418535 67 + 96509753 CATTCCTGGGTTCTCAAACATCTGTTGGCCA-CACGCTCCA-CGTGGGCAT-GCCTGTGGCTTGTGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889527 67 - 16982598 CATTCCTGGGTTCTCAAACATCTGTTGGCCA-CACGCTCCA-CGTGGGCAT-GACTGTGGCTCGTGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691473 67 - 3785965 CATTCCTGGGTTCTCAAACATCTGTTGGCCA-CACGCCCCA-CGTGGGCAT-GCCTGTGGCTCGTGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76064 67 - 179258 CATTCCTGGGTTCTCAAACATCTGTTGGCCA-CACGCCCCA-CGTGGGCAT-GCCTGTGGCTCGTGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5561600 67 - 5823884 CATTCCTGTATTCTCAAACATGTGTTGGCCA-CACGCTCCA-CGTGGGCAT-GCCTGTGGCTCGTGCTGG i colAng1.NW_012114444v1 I 313 C 0 s calJac3.chrUn_GL286459 43965 56 + 372756 CATTCTTGTGTTCCCAAACATCCGTTGGCCA-CACGCTTCA-CGTGGGCGT-GCCTGTG----------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281215 66 + 16356641 CATTCCTGTGTTCCCAAACATCTGTTGGCCA-CACGCTTCA-CGTGAGCAT-GCCTGTGGCTTGT-CTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150461 67 + 1231380 CGTTCCTGTGTTCCCAAACATCTGTTGGCCA-CGTACTTCA-CGTGGGCAT-GCCTGTGGCTCGTGCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680185 67 + 11732439 CATTCCTGTATTCCCAAACATCTTTTGGCCA-CACACTTCA-CGTGGGCGT-GCCTGTGGCTCGTGCTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22844318 65 + 22939663 cagccctagcttgccaaacaac-gacagctg-ca-accaaa-aaaaaaaaa-agctgggcattgtggtgg i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47606960 67 + 47698779 CACTCCCGTGGCCACAGCCGCTTGCTGACCT-TGAGCGACAGCGGGGACGTGGGCTGCGGC--GCGCTGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 244492 62 - 397369 -----GTGTGTGCTCACGTGTCTGCTGGCAGCCAAGCGGCA-CGC-AGCGT-GGCCGTGGCTTGTGGTGG i dasNov3.JH569290 C 0 I 892 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I a score=9371.000000 s hg38.chr20_KI270870v1_alt 110207 9 + 183433 CTGAC--TG--CG s panTro5.chr20 66436515 9 + 66533130 CTGAC--TG--CG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111655 9 + 62195757 CTGAC--TG--CG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 500907 9 - 578057 CTGAC--TG--CG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024093 9 - 110113093 CTGAC--TG--TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750606 7 - 92844088 CTGAC--TG---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418602 7 + 96509753 CTGAC--TG---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889594 7 - 16982598 CTGAC--TG---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691540 5 - 3785965 CTG----TG---- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76131 9 - 179258 CTGACTGTG---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5561667 9 - 5823884 CTGAC--TGTG-- i colAng1.NW_012114444v1 C 0 I 34 s calJac3.chrUn_GL286459 44021 6 + 372756 ---AC--TG--TG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281281 9 + 16356641 CCAAC--TG--TG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150528 9 + 1231380 CTGAC--TG--TG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680252 9 + 11732439 TTGAC--TG--TG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22844383 9 + 22939663 gcgcc--tg--ta i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47607027 9 + 47698779 CAGCT--CT--CG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=10851.000000 s hg38.chr20_KI270870v1_alt 110216 7 + 183433 ---TGCCCCA s panTro5.chr20 66436524 7 + 66533130 ---TGCCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111664 7 + 62195757 ---TGCCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 500916 7 - 578057 ---TGCCCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024102 6 - 110113093 ---TGCCC-A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750613 7 - 92844088 ---TGCCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418609 7 + 96509753 ---TGCCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889601 7 - 16982598 ---TGCCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691545 7 - 3785965 ---TGCCCCA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76140 7 - 179258 ---TGCCCCA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 44027 6 + 372756 ---CGCCCA- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281290 6 + 16356641 ---TGCCCA- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150537 6 + 1231380 ---CGCCCA- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680261 6 + 11732439 ---CGCCCA- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22844392 6 + 22939663 ----gtccca i otoGar3.GL873542 C 0 I 12 s canFam3.chr24 47607036 7 + 47698779 CCCTTCC--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e colAng1.NW_012114444v1 5561676 34 - 5823884 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=262986.000000 s hg38.chr20_KI270870v1_alt 110223 34 + 183433 ---------GCCATCGTGGGAG---CATTTACACCA---------CAGAAATGGA s panTro5.chr20 66436531 34 + 66533130 ---------GCCATCGTGGGAG---CATTTACACCA---------CAGAAATGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111671 34 + 62195757 ---------GCCATCGTGGGAG---CATTTACACCA---------CAGAAATGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 500923 34 - 578057 ---------GCCATCGTGGGAG---CATTTACACGA---------CAGAAATGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024108 34 - 110113093 ---------GCCATCGTGGGAG---CATTTACACCA---------CAGAAATGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750620 34 - 92844088 ---------GCCATAGTGGGAG---CGTTTACACCA---------CAGAAATGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418616 34 + 96509753 ---------GCCATAGTGGGAG---CGTTTACACCA---------CAGAAATGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889608 34 - 16982598 ---------GCCATAGTGGGAG---CGTTTACACCA---------CAGAAATGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691552 34 - 3785965 ---------GCCATAGTGCGAG---CGTTTACACCA---------CAGAAATGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76147 34 - 179258 ---------GCCATAGTGCGAG---CGTTTACACCA---------CAGAAATGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5561710 34 - 5823884 ---------GCCACAGTGGGAG---CATTTACACCA---------CAGAAATGGG i colAng1.NW_012114444v1 I 34 C 0 s calJac3.chrUn_GL286459 44033 43 + 372756 ---------GCCACGGTGGCAG---CATTTACACCACAGAAATGGCAGAAATGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281296 34 + 16356641 ---------GCCACGGTGGCAG---CATTTACACCA---------CAGAAATGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150543 34 + 1231380 ---------GCCACAGCGGCAG---CATTTACACCA---------CAGAAATGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680267 34 + 11732439 ---------GCCACGGTGGCAG---CATTTATACCA---------CAGAAATGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22844410 37 + 22939663 ---------gctgaggcaagagaatcacttaagtcc---------gggaggtgga i otoGar3.GL873542 I 12 I 331 s canFam3.chr24 47607043 35 + 47698779 TCCCTGTGCGTGTCAGCTGCAG---CAGGTGCCCCG---------GG-------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=77631.000000 s hg38.chr20_KI270870v1_alt 110257 9 + 183433 -CTGATGATG s panTro5.chr20 66436565 9 + 66533130 -CTGATGATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111705 9 + 62195757 -CTGATGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 500957 9 - 578057 -CTGATGATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024142 9 - 110113093 -CTGATGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750654 9 - 92844088 -CTGATGATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418650 9 + 96509753 -CTGATGATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889642 9 - 16982598 -CTGATGATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691586 9 - 3785965 -CTGATGATG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76181 9 - 179258 -CTGATGATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5561744 9 - 5823884 -CTGATGATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44076 9 + 372756 -CTGATGATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281330 9 + 16356641 -CTGATGATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150577 9 + 1231380 -CTGATGATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680301 9 + 11732439 -CTGATGATG i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47607078 9 + 47698779 CCGGGCTCC- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181790815 456 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e otoGar3.GL873542 22844447 331 + 22939663 I a score=1238308.000000 s hg38.chr20_KI270870v1_alt 110266 154 + 183433 T-TCCCCCTCCCAGAGACCTGTTTACCAGCACACGCTGGGCTCTGACCGGACAAGCAGACGAGACCTCTGTCCTGGTGGGGGCCACACCGTGG-GTACCAGAACAGGAAGCATGACCCACGCAGAAAACGCACCGTTGTGGTCTGTGAGAGGAGCA s panTro5.chr20 66436574 154 + 66533130 T-TCCCCCTCCCAAAGACCTGTTTACCAGCACACCCTGGGCTCTGACCGGACAAGCAGATGAGACCTCTGTCCTGGTGGGGGCCACACTGTGG-GTGCCAGAACAGGAAGCATGACCCACGGAGAAAATGCACTGTTGTGGTCTGTGAGAGGAGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111714 154 + 62195757 T-TCCCCCTCCCAAAGACCTGTTTACCAGCACACCCTGGGCTCTGACCGGACAAGCAGACGAGACCTCTGTCCTGGTGGGGGCCACACTGTGG-GTGCCAGAACAGGAAGCATGACCCACGGAGAAAACGCACTGTTGTGGTCTGTGAGAGGAGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 500966 154 - 578057 T-TCCCCCTCCCAAAGACCTGTTTACCAGCACACCCTGGGCTCTGACCGGACAAGCAGACGAGACCTCTGTCCTGGTGGGGACCACACTATGG-GTGCCAGAACAGGAAGCCTGACCCACGGAGAAAACGCACTGTTGTGGTCTGTGAGAGGAGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024151 138 - 110113093 T-TTCCCCTCCCAAAGACC----------------CTGGGCTCTGACTGGACAAGCGGATGAGACCTCTGTCCTGGGGGGGCCCACACTGTGG-GTGCCAGAACAGGAAGCATGACCCACAGAGAAAATGCACTGTTGCGGTCTGTGAGAGGAGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750663 155 - 92844088 TCTCCCCCTCCCAAAGACCTGTTTGCCAGCACACCCTGGGCTCTGACTGGACGAGCAGACGAGACCTCTGTTCTGGTGGGGCCCACACTGTGG-GTGCCAGAACGGGAAGCATGACCCACAGAGAACACGCACCGCTGTGGGCTGTGAGAGGAGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418659 155 + 96509753 TCTCCCCCTCCCAAAGACCTGTTTGCCAGCACACCCTGGGCTCTGACTGGACGAGCAGACGAGACCTCTGTTCTGGTGGGGCCCACACTGTGG-GTGCCAGAACGGGAAGCATGACCCACAGAGAACACGCACCGCTGTGGGCTGTGAGAGGAGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889651 155 - 16982598 TCTCCCCCTCCCAAAGACCTGTTTGCCAGCACACCCTGGGCTCTGACTGGACGAGCAGACGAGACCTCTGTTCTGGTGGGGCCCACACTGTGG-GTGCCAGAACGGGAAGCACGACCCACAGAGAACACGCACCGCTGTGGGCTGTGAGAGGAGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691595 155 - 3785965 TCTCCCCCTCCCAAAGACCTGTTTACCAGCACACCCTGGGCTCTGACTGGATGAGCAGATGAGACCTCTGTTCTGGTGGGGCCCACACTGTGG-GTACCAGAACAGGAAGCATGACCCACAGAGAACACGCACCGTTGTGGGCTGTGAGAGGAACA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76190 155 - 179258 TCTCCCCCTCCCAAAGACCTGTTTACCAGCACACCCTGGGCTCTGACTGGACGAGCAGATGAGACCTCTGTTCTGGTGGGGCCCACACTGTGG-GTACCAGAACAGGAAGCATGACCCACAGAGAACACGCACCGTTGTGGGCTGTGAGAGGAGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5561753 155 - 5823884 TTTCCCCCTCCCAAAGACCTGTTTACCAGCACACCCTGGGCTCTGACTGGACAAGCAGATGAGACCTCTGTTCTGGTGGGGCCCACACTGTGG-GTGCCAGAACAGGAAGCATGACCCACAGAGAACACGCACTGTTGTGGTCTATGAGAGGAGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44085 149 + 372756 T-TCTCCCTCCCAAAGGCCTGCGTTCTTGCCTACTGTGGGTGCTGACT-GACAAGCAGATGAGGCCTCTGTCCTGGTGGGGCCCACACTGTGG-GTGCTGGAACAGGGAGCGTGA-CCCCAGAGAAAACCCACTGCTGTGGCCTGTGAGAGGA--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281339 145 + 16356641 --ACTCCCTCCCAAAGACCTGCGTACCCGCCTGCCGTGGGTG----CT-GACAAGCAGATGAGGCCTCTGTCCTCATGGGGCACACACTGTGG-GTCCTGGAACAGGGAGCATGACCCCCAGAGAAAACCCACTGCTGTGGCCTATAAGAGGA--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150586 153 + 1231380 C-TCTCCCTCCCAAAGACCTGCGTACCTGCCTGCCGTGGGTGCTGACT-GACAAGCAGATGAGGCCTCTGTCCTCGTGGGGCCCACACTGTGG-GTCCTGGAACAGGGAGCATGACCCCCAGAGAAAACCCACTGCTGTGGCCTGTGAGAGGAGCA i cebCap1.NW_016107870v1 C 0 I 35 s aotNan1.NW_018500483v1 2680310 153 + 11732439 T-TCTCCCTCCCAAAGACCTGCGTATCCGCCTACCATGGGTGCTGACT-GACAAGCAGATGAGGCCTCTGTCCTGGTGGGGCCCACGCTGTGG-GTGCTGGAACAGGGAGCATGACCCTCAGAGAAAACCCACTGCTGTGGCCTGTGAGAGGAGCA i aotNan1.NW_018500483v1 C 0 I 40 s mm10.chr2 181791271 138 + 182113224 -TTTACCTCTCCAAGGGTCTGTTTACCAGGACAGCAT-AACTCTGATCTGAGAAGCAGACAAGACCTCTTTTTGGGTGGGGCTCACACTGTGGTGTGCCAGAATAGAGACTGTGACTTT-------------ttttttttttttgtgataggg--- i mm10.chr2 I 456 C 0 s canFam3.chr24 47607087 115 + 47698779 -TTCCCCACCCCAGCG-------------------CTGGGCTGCGGTCAGACGAGCAGCCGAGACCCCGGTCCCGG-GGGGCTGATGGCCTGG-GTGCCAGCACAGGGGACACG-------------------TGCTGTGACCTGGTACAGCAACG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e otoGar3.GL873542 22844447 331 + 22939663 I a score=239288.000000 s hg38.chr20_KI270870v1_alt 110420 48 + 183433 TCGCGTCCTGTGTGCAGACCATGGCACTGGATGAGCTCAC-----AGACACAG s panTro5.chr20 66436728 48 + 66533130 TCACGTCCTGTGTGCAGACTGTGGCACTGGATGAGCTCAC-----AGACACAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111868 48 + 62195757 TCACGTCCTGTGTGCAGACTGTGGCACTGGATGAGCTCAC-----AGACACAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501120 48 - 578057 TCACGTCCTATGTGCAGACTGTGGCACTGGATGAGCTCAC-----AGACACAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024289 48 - 110113093 TCACGTCCTGTGTGCAGACCGTGGCACTGGATGAGCTCAC-----GGACACAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750818 48 - 92844088 CCACGTCCTGTGTGCAGACCATGGCACTGGATGAACTCAC-----GGACACAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418814 48 + 96509753 CCACGTCCTGTGTGCAGACCATGGCACTGGATGAACTCAC-----GGACACAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889806 48 - 16982598 CCGCGTCCTGTGTGCAGACCATGGCACTGGATGAACTCAC-----GGACACAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691750 48 - 3785965 CCACGTCCTGTGTGCAGACCATGGCACTGGATGAACTCAC-----GGACACAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76345 48 - 179258 CCACGTCCTGTGTGCAGACCATGGCACTGGATGAACTCAC-----GGACACAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5561908 48 - 5823884 CCATGTCCTGTATGCAGACCGTGGCACTGGATGAACTCAC-----GGACACAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44234 33 + 372756 -------------GCAGCCCGTGGCATGGGACGAGCTCGT-----AGACAC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281484 35 + 16356641 -------------GCAGCCTGTGGCATGGGATGAGCTCAC-----AGACACAG i saiBol1.JH378156 C 0 I 7 s mm10.chr2 181791409 47 + 182113224 ----tttctctgtgta-accctggctatcctgggactcactctgtagac-cag i mm10.chr2 C 0 C 0 s canFam3.chr24 47607202 10 + 47698779 ------------------TCCTGGCGTG------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e aotNan1.NW_018500483v1 2680463 40 + 11732439 I e otoGar3.GL873542 22844447 331 + 22939663 I a score=50888.000000 s hg38.chr20_KI270870v1_alt 110468 7 + 183433 AGTCACC s panTro5.chr20 66436776 7 + 66533130 AGTCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111916 7 + 62195757 AGTCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501168 7 - 578057 AGTCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024337 7 - 110113093 AGTCACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750866 7 - 92844088 AGTCACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418862 7 + 96509753 AGTCACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889854 7 - 16982598 AGTCACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691798 7 - 3785965 AGTCACC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76393 7 - 179258 AGTCACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5561956 7 - 5823884 AGTCACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44267 7 + 372756 AGTCACC i calJac3.chrUn_GL286459 C 0 C 0 s mm10.chr2 181791456 7 + 182113224 gctggcc i mm10.chr2 C 0 I 6 s canFam3.chr24 47607212 7 + 47698779 AGTCGCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e saiBol1.JH378156 16281519 7 + 16356641 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e aotNan1.NW_018500483v1 2680463 40 + 11732439 I e otoGar3.GL873542 22844447 331 + 22939663 I a score=1600.000000 s hg38.chr20_KI270870v1_alt 110475 3 + 183433 TGT- s panTro5.chr20 66436783 3 + 66533130 TGT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111923 3 + 62195757 TGT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501175 3 - 578057 TGT- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92750873 3 - 92844088 TGT- i rheMac8.chr10 C 0 I 1 s macNem1.NW_012014244v1 16889861 3 - 16982598 TGT- i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3691805 3 - 3785965 TGT- i cerAty1.NW_012001373v1 C 0 I 1 s manLeu1.NW_012101652v1 76400 3 - 179258 TGT- i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5561963 3 - 5823884 TGT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44274 3 + 372756 TTT- i calJac3.chrUn_GL286459 C 0 C 0 s mm10.chr2 181791469 1 + 182113224 t--- i mm10.chr2 I 6 C 0 s canFam3.chr24 47607219 3 + 47698779 -GGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e saiBol1.JH378156 16281519 7 + 16356641 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e aotNan1.NW_018500483v1 2680463 40 + 11732439 I e nomLeu3.chr13 110024344 0 - 110113093 C e otoGar3.GL873542 22844447 331 + 22939663 I e macFas5.chr10 96418869 0 + 96509753 C a score=-1915.000000 s hg38.chr20_KI270870v1_alt 110478 1 + 183433 -C s panTro5.chr20 66436786 1 + 66533130 -C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111926 1 + 62195757 -C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501178 1 - 578057 -C i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chrUn_GL286459 44277 1 + 372756 -T i calJac3.chrUn_GL286459 C 0 C 0 s mm10.chr2 181791470 1 + 182113224 -c i mm10.chr2 C 0 C 0 s canFam3.chr24 47607222 1 + 47698779 A- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e cerAty1.NW_012001373v1 3691808 1 - 3785965 I e colAng1.NW_012114444v1 5561966 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e manLeu1.NW_012101652v1 76403 1 - 179258 I e saiBol1.JH378156 16281519 7 + 16356641 I e macNem1.NW_012014244v1 16889864 1 - 16982598 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e aotNan1.NW_018500483v1 2680463 40 + 11732439 I e nomLeu3.chr13 110024344 0 - 110113093 C e rheMac8.chr10 92750876 1 - 92844088 I e otoGar3.GL873542 22844447 331 + 22939663 I e macFas5.chr10 96418869 0 + 96509753 C a score=-34.000000 s hg38.chr20_KI270870v1_alt 110479 50 + 183433 -GGGAACCCCCGTGTGTCGGGAACCCCCGCGTGTCGGGAACCCCCGCGTGT----- s panTro5.chr20 66436787 26 + 66533130 -GGGAACCCCTGTGTGTCGGGAAACCC----------------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111927 26 + 62195757 -GGGAACCCCTGTGTGTCGGGAAACCC----------------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501179 26 - 578057 -GGGAACCCCCGCGTGTCGGGAACCCC----------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s mm10.chr2 181791471 48 + 182113224 -agaaatccgcctgactctgcctccca--agtgctgggatcaaaggtgtgt----- i mm10.chr2 C 0 I 113 s canFam3.chr24 47607223 32 + 47698779 GGGAGGGCCGAGCTAGGGTGCAGCCTT------------------------CCTGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e cerAty1.NW_012001373v1 3691808 1 - 3785965 I e colAng1.NW_012114444v1 5561966 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e manLeu1.NW_012101652v1 76403 1 - 179258 I e saiBol1.JH378156 16281519 7 + 16356641 I e macNem1.NW_012014244v1 16889864 1 - 16982598 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e calJac3.chrUn_GL286459 44278 0 + 372756 C e aotNan1.NW_018500483v1 2680463 40 + 11732439 I e nomLeu3.chr13 110024344 0 - 110113093 C e rheMac8.chr10 92750876 1 - 92844088 I e otoGar3.GL873542 22844447 331 + 22939663 I e macFas5.chr10 96418869 0 + 96509753 C a score=12315.000000 s hg38.chr20_KI270870v1_alt 110529 106 + 183433 CGGGAACCTCTGC---GTGTCGGGAACCC---CCGCGTGTCGGGAACCCCCGCGTGTCGGGAACCCCCGCGTGTCGGGAACCCCTCGCGTGTCGGGAACCCCCGCGTGTCGG s panTro5.chr20 66436813 51 + 66533130 ----------TGC---GTGTCAGGAACCC---CCGTGTGTCGGGAACCCCTGCGTGTCGGGAACCCC--------------------------------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62111953 51 + 62195757 ----------TGC---GTGTCAGGAACCC---CCGTGTGTCGGGAACCCCTGCGTGTCGGGAACCCC--------------------------------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501205 54 - 578057 ----------TGTGTGGTGTTGGGAACCC---CTGCGTGTCGGGAACCCCTGTGTGTCAGGAACCCC--------------------------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s canFam3.chr24 47607255 79 + 47698779 ---------------------GGGGACCCGCTCCGTGGATGGGGG---CCGATGCCTCGGGGTCCCG---GAGTCAGGTGTGGCCCCCGCCTCGGGCGGCCTCCAG------ i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e cerAty1.NW_012001373v1 3691808 1 - 3785965 I e colAng1.NW_012114444v1 5561966 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181791519 113 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e manLeu1.NW_012101652v1 76403 1 - 179258 I e saiBol1.JH378156 16281519 7 + 16356641 I e macNem1.NW_012014244v1 16889864 1 - 16982598 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e calJac3.chrUn_GL286459 44278 0 + 372756 C e aotNan1.NW_018500483v1 2680463 40 + 11732439 I e nomLeu3.chr13 110024344 0 - 110113093 C e rheMac8.chr10 92750876 1 - 92844088 I e otoGar3.GL873542 22844447 331 + 22939663 I e macFas5.chr10 96418869 0 + 96509753 C a score=518.000000 s hg38.chr20_KI270870v1_alt 110635 11 + 183433 GAACCTCTGCG s panTro5.chr20 66436864 4 + 66533130 -------TGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112004 4 + 62195757 -------TGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501259 4 - 578057 -------TGCG i gorGor5.CYUI01015848v1 C 0 C 0 s otoGar3.GL873542 22844778 8 + 22939663 AAATCTCT--- i otoGar3.GL873542 I 331 C 0 s canFam3.chr24 47607334 11 + 47698779 GAGGCTGTGCG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e cerAty1.NW_012001373v1 3691808 1 - 3785965 I e colAng1.NW_012114444v1 5561966 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181791519 113 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e manLeu1.NW_012101652v1 76403 1 - 179258 I e saiBol1.JH378156 16281519 7 + 16356641 I e macNem1.NW_012014244v1 16889864 1 - 16982598 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e calJac3.chrUn_GL286459 44278 0 + 372756 C e aotNan1.NW_018500483v1 2680463 40 + 11732439 I e nomLeu3.chr13 110024344 0 - 110113093 C e rheMac8.chr10 92750876 1 - 92844088 I e macFas5.chr10 96418869 0 + 96509753 C a score=5922.000000 s hg38.chr20_KI270870v1_alt 110646 3 + 183433 TGT s panTro5.chr20 66436868 3 + 66533130 TGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112008 3 + 62195757 TGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501263 3 - 578057 TGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024344 3 - 110113093 TGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96418869 3 + 96509753 TGT i macFas5.chr10 C 0 C 0 s otoGar3.GL873542 22844786 3 + 22939663 TGT i otoGar3.GL873542 C 0 I 1 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607345 0 + 47698779 C e cerAty1.NW_012001373v1 3691808 1 - 3785965 I e colAng1.NW_012114444v1 5561966 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181791519 113 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e manLeu1.NW_012101652v1 76403 1 - 179258 I e saiBol1.JH378156 16281519 7 + 16356641 I e macNem1.NW_012014244v1 16889864 1 - 16982598 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e calJac3.chrUn_GL286459 44278 0 + 372756 C e aotNan1.NW_018500483v1 2680463 40 + 11732439 I e rheMac8.chr10 92750876 1 - 92844088 I a score=750.000000 s hg38.chr20_KI270870v1_alt 110649 1 + 183433 C s panTro5.chr20 66436871 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112011 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501266 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024347 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96418872 1 + 96509753 G i macFas5.chr10 C 0 C 0 s saiBol1.JH378156 16281526 1 + 16356641 C i saiBol1.JH378156 I 7 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607345 0 + 47698779 C e cerAty1.NW_012001373v1 3691808 1 - 3785965 I e colAng1.NW_012114444v1 5561966 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181791519 113 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e manLeu1.NW_012101652v1 76403 1 - 179258 I e macNem1.NW_012014244v1 16889864 1 - 16982598 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e calJac3.chrUn_GL286459 44278 0 + 372756 C e aotNan1.NW_018500483v1 2680463 40 + 11732439 I e rheMac8.chr10 92750876 1 - 92844088 I e otoGar3.GL873542 22844789 1 + 22939663 I a score=7397.000000 s hg38.chr20_KI270870v1_alt 110650 1 + 183433 G s panTro5.chr20 66436872 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112012 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501267 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024348 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750877 1 - 92844088 G i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96418873 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889865 1 - 16982598 G i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3691809 1 - 3785965 G i cerAty1.NW_012001373v1 I 1 C 0 s manLeu1.NW_012101652v1 76404 1 - 179258 G i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5561966 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16281527 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2680503 1 + 11732439 G i aotNan1.NW_018500483v1 I 40 C 0 s otoGar3.GL873542 22844790 1 + 22939663 G i otoGar3.GL873542 I 1 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607345 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181791519 113 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e cebCap1.NW_016107870v1 1150739 35 + 1231380 I e calJac3.chrUn_GL286459 44278 0 + 372756 C a score=42072.000000 s hg38.chr20_KI270870v1_alt 110651 5 + 183433 GGAAC s panTro5.chr20 66436873 5 + 66533130 GGAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112013 5 + 62195757 GGAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501268 5 - 578057 GGAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024349 5 - 110113093 GGAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750878 5 - 92844088 GGAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418874 5 + 96509753 GGAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889866 5 - 16982598 GGAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691810 5 - 3785965 GGAAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76405 5 - 179258 GGAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5561967 5 - 5823884 GGGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44278 5 + 372756 GGAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281528 5 + 16356641 GGAAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150774 5 + 1231380 GGAAC i cebCap1.NW_016107870v1 I 35 C 0 s aotNan1.NW_018500483v1 2680504 5 + 11732439 GGAAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22844791 5 + 22939663 CAAGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607345 0 + 47698779 C e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181791519 113 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=281277.000000 s hg38.chr20_KI270870v1_alt 110656 30 + 183433 CCCTGTGTGCAGGACTTTCTCTGTGGAT----GA s panTro5.chr20 66436878 30 + 66533130 CCCTGTGTGCAGGACTTTCTCTGTGGAT----GA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112018 30 + 62195757 CCCTGTGTGCAGGACTTTCTCTGTGGAT----GA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501273 30 - 578057 CCCTGTGTGCAGGACTTTCTCTGTGGAT----GA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024354 34 - 110113093 CCCTGTGTGCAGGACCTGTTCTGTGGATGAGAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750883 34 - 92844088 CCCTGCGTGCAGGACTTTCTCTGTGGATGAGGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418879 34 + 96509753 CCCTGCGTGCAGGACTTTCTCTGTGGATGAGGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889871 34 - 16982598 CCCTGCGTGCAGGACTTTCTCTGTGGATGAGGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691815 34 - 3785965 CCCTGCGTGCAGGACTTTCTCTGTGGATGAGGGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76410 34 - 179258 CTCTGCGTGCAGGACTTTCTCTGTGAATGAGGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5561972 34 - 5823884 CCCTGCGTGCAGGACCTTCTCTGTGGATGAGGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44283 30 + 372756 CCCTGCATGCAGGACTTTCTCTGTGGAT----GA i calJac3.chrUn_GL286459 C 0 I 4 s saiBol1.JH378156 16281533 30 + 16356641 CCCTGAATGCAGGACTTTCGCTGTGGAT----GA i saiBol1.JH378156 C 0 I 4 s cebCap1.NW_016107870v1 1150779 30 + 1231380 CCCTGCATGCAGGACTTTCTCTATGGAT----GA i cebCap1.NW_016107870v1 C 0 I 9 s aotNan1.NW_018500483v1 2680509 30 + 11732439 CCCTGCATGCAGGACTTTCTCTGTGGAT----GA i aotNan1.NW_018500483v1 C 0 I 10 s otoGar3.GL873542 22844796 30 + 22939663 CCCTGTGCACAGGACTTTCTCTGTGGAC----AA i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181791632 28 + 182113224 CCCTGTTTGTGGGAC--TCTTCATGGAT----GA i mm10.chr2 I 113 C 0 s canFam3.chr24 47607345 12 + 47698779 CCCTCGGGGCAG---------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=52737.000000 s hg38.chr20_KI270870v1_alt 110686 15 + 183433 CTTAACACTGCATTG s panTro5.chr20 66436908 15 + 66533130 CTTAACACTGCATTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112048 15 + 62195757 CTTAACACTGCATTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501303 15 - 578057 CTTAACACCGCATTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024388 15 - 110113093 CTTAACACCGCATTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750917 15 - 92844088 CTTAGCACCCCATTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418913 15 + 96509753 CTTAGCACCCCATTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889905 15 - 16982598 CTTAGCACCCCATTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691849 15 - 3785965 CTTAGCACCCCATTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76444 15 - 179258 CTTAGCACCCCATTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562006 15 - 5823884 CTGAGCACCCCACTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44317 7 + 372756 CTTAACA-------- i calJac3.chrUn_GL286459 I 4 C 0 s saiBol1.JH378156 16281567 6 + 16356641 CTT-ACA-------- i saiBol1.JH378156 I 4 C 0 s otoGar3.GL873542 22844829 15 + 22939663 CCTTGGGCCCCATTC i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181791660 2 + 182113224 -------------TG i mm10.chr2 C 0 I 2 s canFam3.chr24 47607357 13 + 47698779 --TGGCACGGCCTCG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e cebCap1.NW_016107870v1 1150809 9 + 1231380 I e aotNan1.NW_018500483v1 2680539 10 + 11732439 I a score=2560.000000 s hg38.chr20_KI270870v1_alt 110701 1 + 183433 G s panTro5.chr20 66436923 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112063 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501318 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024403 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750932 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418928 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889920 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691864 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76459 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562021 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s cebCap1.NW_016107870v1 1150818 1 + 1231380 G i cebCap1.NW_016107870v1 I 9 C 0 s otoGar3.GL873542 22844844 1 + 22939663 A i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47607370 1 + 47698779 G i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181791662 2 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e saiBol1.JH378156 16281573 0 + 16356641 C e calJac3.chrUn_GL286459 44324 0 + 372756 C e aotNan1.NW_018500483v1 2680539 10 + 11732439 I a score=677803.000000 s hg38.chr20_KI270870v1_alt 110702 69 + 183433 CTCAGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCTCGCCTCCCCA---CCAGCTCAGGCAGAGCTCCC s panTro5.chr20 66436924 69 + 66533130 CTCAGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCTCGCCTCCCCA---CCAGCTCAGGCAGAGCTCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112064 69 + 62195757 CTCAGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCTCGCCTCCCCA---CCAGCTCAGGCAGAGCTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501319 69 - 578057 CTCGGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCTCGCCTCCCCA---CCAGCTCAGGCAGAGCTCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024404 69 - 110113093 CTCAGAACTTCACAGCCTGCAGAGCCCCTAACCCCAGCTCGCCTCCCCA---CCAGCTCCGGCAGAGCTCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92750933 69 - 92844088 CTCAGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCCCGTCTCCCCA---CGAGCTCAGGCAGAGCTCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418929 69 + 96509753 CTCAGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCCCGTCTCCCCA---CGAGCTCAGGCAGAGCTCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889921 69 - 16982598 CTCAGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCTCGTCTCCCCA---CGAGCTCAGGCAGAGCTCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691865 69 - 3785965 CTCAGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCTCATCTCCCCA---CCAGCTCAGGCAGAGCTCCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76460 69 - 179258 CTCAGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCTCGTCTCCCCA---CCAGCTCAGGCAGAGCTCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562022 69 - 5823884 CTCAGAACTTCACAGCCTGCAGTGCCCCTAACCCCAGCTCATCTCCCCA---CCAGCTCAGGCAGAGCTCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44324 68 + 372756 CTCAGAACTTCCCAGCCCGCAGTG-CCCCAACCCCAGCTCATCTCCCCA---CCGGCTCAGAGAGACCTCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281573 68 + 16356641 CTCAGAACTT-CCAGCCCGCAGTGCCCCCAACCCCAGCTTATCTCCCCA---CCAGCTCAGAGAGACCTCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150819 68 + 1231380 CTCAGAACTTCCCAG-CCGCAGTGCCCCCAACCCCAGCTCATCTCCCCA---CCAGCTCAGAGAGACCTCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680549 69 + 11732439 CTCAGAACTTCCCAGCCCGCAGTGCCCCCAGCACCAGCTCATCTCCCCA---TCAGCTCAGAGAGACCTCCC i aotNan1.NW_018500483v1 I 10 C 0 s otoGar3.GL873542 22844845 72 + 22939663 CTCAGAACCTTACAGCCTGTGGTGTCCCCCACCCCAGCTCATCATCCCATCCCCAGCTCAGGCGGAGCTCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181791664 65 + 182113224 TTCAGAATTCCTCACCTTGCAGTACCCTTGGCCCTGG----GCTACCCT---ATAACTTAGGCAAAGCTCTT i mm10.chr2 I 2 C 0 s canFam3.chr24 47607371 43 + 47698779 -GCTGAGCTGAGCAGCAGGCCGA-----------------------CCA---GGAGC--AGGCCGGGCTCCC i canFam3.chr24 C 0 I 30 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=612022.000000 s hg38.chr20_KI270870v1_alt 110771 79 + 183433 AGGAAGACAGTCCAT------------------TGGTTGTTTACCAGGTGAGCTGAGGAGAGGTTGGACTTGGATCGAGCAGGACCCTGAGCTGCTA s panTro5.chr20 66436993 79 + 66533130 AGGAAGACAGTCCAT------------------TGGTTGTTTACCAGGTGAGCTGAGGAGAGGTTGGACTTGGATCGAGCAGGACCCTGAGCTGCTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112133 79 + 62195757 AGGAAGACAGTCCAT------------------TGGTTGTTTACCAGGTGAGCTGAGGAGAGGTTGGACTTGGATCGAGCAGGACCCTGAGCTGCTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501388 79 - 578057 AGGAAGACAGTCCAC------------------TGGTTGTTTACCAGGTGAGCTGAGGAGAGGTTGGACTTGGATCGAGTAGGACCCTGAGCTGCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024473 79 - 110113093 AGGAAGACACTCCAT------------------TGGCTGTTTACCAGGTGAGCTGAGGAGAGGTTGGACTTGGATGGAGTAGGACCCTGAGCGGCTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751002 79 - 92844088 GGGAAGACACTCCAT------------------TGGTTGTTTACCAGGTGAACTGAGGAGAGGTTGGACTTGGCTCAAGTTGGACCCTGAGCTGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96418998 79 + 96509753 GGGAAGACACTCCAT------------------TGGTTGTTTACCAGGTGAACTGAGGAGAGGTTGGACTTGGCTCAAGTTGGACCCTGAGCTGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16889990 79 - 16982598 GGGAAGACACTCCAT------------------TGGTTGTTTACCAGGTGAACTGAGGAGAGGTTGGACTTGGCTCAAGTTGGACCCTGAGCTGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3691934 79 - 3785965 GGGAAGATACTCCAT------------------TGGTTGTTTACCAGGTGAACTGAGGAGAGGTTGGACTTGGCTCAAGTTGGACCCTGAGCTGCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76529 79 - 179258 GGGAAGATACTCCAT------------------TGGTTGTTTACCAGGTGAACTGAGGAGAGGTTGGACTTGGCTCAAGTTGGACCCTGAGCTGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562091 79 - 5823884 GGGAAGACACTCCAT------------------TGGTTGTTTACCAGGTGAACTGAGGAGAGGTTGGACTTGGCTCGAGTTGGACCCTGAGCTGCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44392 77 + 372756 AGGAAGACACTC--T------------------TGGTTGTTTACGAGGTGAGCTGAGGAGTGGTCGGACTTGGATCGAGTAGGACCCTGAGCTGCTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281641 63 + 16356641 AGGAAGATACTCTGT------------------TGGTTGTTTACCAGGTGAGCTGAGGAGAGGTC----------------AGACCCTGAGCTGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150887 63 + 1231380 AGGAAGACACTCTGT------------------TGGTTGTTTACCAGGTGAGCTGAGGAGAGGTC----------------GGACCCTGAGCTGCTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680618 79 + 11732439 AGGAAGACATTCCGT------------------TGGTTGTTTACCAGGTGAGCTGAGGAGAGGTCGGACTTGGATCGAGTAGGACCCTGAGCTGCTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22844917 39 + 22939663 AGGACGACACT--------------------------TGTGTTTCGGGC----------------------------AGCTGTAGCCTG----GTTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181791729 93 + 182113224 AAAATGACATTTGTTATCCGGGAGGCTGAAGAATGGTTGT-TACAAGATTATCTGAGGA---GCTTGAATTGGAATAAGCAAGACTCAGTGAGGCCT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607414 30 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=35547.000000 s hg38.chr20_KI270870v1_alt 110850 3 + 183433 TTT s panTro5.chr20 66437072 3 + 66533130 TTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112212 3 + 62195757 TTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501467 3 - 578057 TTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024552 3 - 110113093 TTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751081 3 - 92844088 TTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419077 3 + 96509753 TTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890069 3 - 16982598 TTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692013 3 - 3785965 TTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76608 3 - 179258 TTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562170 3 - 5823884 TTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44469 3 + 372756 TTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281704 3 + 16356641 TTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1150950 3 + 1231380 TTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680697 3 + 11732439 TTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22844956 3 + 22939663 TTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181791822 3 + 182113224 CTT i mm10.chr2 C 0 I 47 s canFam3.chr24 47607444 3 + 47698779 TCT i canFam3.chr24 I 30 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=182572.000000 s hg38.chr20_KI270870v1_alt 110853 27 + 183433 CCGACCTCGGAGCCCACTGG-------------------------------GAGT-GCC s panTro5.chr20 66437075 27 + 66533130 CCGACCTCGGAGCCCACTGG-------------------------------GAGT-GCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112215 27 + 62195757 CCGACCTCGGAGCCCACTGG-------------------------------GAGT-GCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501470 27 - 578057 CCGACCTCGGAGCCCACTGG-------------------------------GAGT-GCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024555 27 - 110113093 CCGACCTTGGAGCCCACTGG-------------------------------GAGT-GCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751084 57 - 92844088 CCGACCTTGGAGCCCACTGGGAGTTTCCGTGTGCCCTG-ATTTAACACTCTGAGT-GCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419080 57 + 96509753 CCGACCTTGGAGCCCACTGGGAGTTTCCGTGTGCCCTG-ATTTAACACTCTGAGT-GCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890072 57 - 16982598 CCGACCTTGGAGCCCACTGGGAGTTTCCGTGTGCCCTG-ATTTAACACTCTGAGT-GCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692016 58 - 3785965 CCGACCTTGGAGCCCACTGGGCGTTTCCGTGTGCCCTGAATTTAACACTCTGAGT-GCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76611 58 - 179258 CCGAACTTGGAGCCCACTGGGAGTTTCCGTGTGCCCTGAATTTAACACTCTGAGT-GCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562173 58 - 5823884 CCGACCTTGGAGCCCACTGGGAGTTTCCGTGTGCCCTGAGTTTAACATTCTGAGT-GCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44472 28 + 372756 CCGACTTCAGAGCCCACTGG-------------------------------GAGTGTCT i calJac3.chrUn_GL286459 C 0 I 30 s saiBol1.JH378156 16281707 27 + 16356641 CTGACCTTGGCGCCCACTGG-------------------------------GAGT-TCC i saiBol1.JH378156 C 0 I 31 s cebCap1.NW_016107870v1 1150953 27 + 1231380 CCGACCTTGGAGCCCACTGG-------------------------------GATT-TCC i cebCap1.NW_016107870v1 C 0 I 30 s aotNan1.NW_018500483v1 2680700 27 + 11732439 CCGACCTCGGAGCCCACTGG-------------------------------GAGT-TTC i aotNan1.NW_018500483v1 C 0 I 18 s otoGar3.GL873542 22844959 13 + 22939663 ACCACT---------------------------------------------GAGT-GCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47607447 27 + 47698779 CGGGCCCTGGATTTCTCTCG-------------------------------AAGC-GCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181791825 47 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=27655.000000 s hg38.chr20_KI270870v1_alt 110880 5 + 183433 ------TGAGC s panTro5.chr20 66437102 5 + 66533130 ------TGAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112242 5 + 62195757 ------TGAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501497 5 - 578057 ------TGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024582 5 - 110113093 ------TGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751141 5 - 92844088 ------TGAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419137 5 + 96509753 ------TGAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890129 5 - 16982598 ------TGAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692074 5 - 3785965 ------TGAGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76669 5 - 179258 ------TAAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562231 5 - 5823884 ------TGAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44530 5 + 372756 ------TGAGA i calJac3.chrUn_GL286459 I 30 C 0 s saiBol1.JH378156 16281765 4 + 16356641 ------TGAG- i saiBol1.JH378156 I 31 C 0 s cebCap1.NW_016107870v1 1151010 5 + 1231380 ------TGAGA i cebCap1.NW_016107870v1 I 30 C 0 s canFam3.chr24 47607474 11 + 47698779 CGCCAGAAAGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181791825 47 + 182113224 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e aotNan1.NW_018500483v1 2680727 18 + 11732439 I e otoGar3.GL873542 22844972 0 + 22939663 C a score=213517.000000 s hg38.chr20_KI270870v1_alt 110885 28 + 183433 GAAGAAGCAG-TTTGATGGTTTTTCCTTT s panTro5.chr20 66437107 28 + 66533130 GAAGAAGCAG-TTTGATGGTTTTTCCTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112247 28 + 62195757 GAAGAAGCAG-TTTGATGGTTTTTCCTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501502 28 - 578057 GAAGAAGCAG-TTTGATGGTTTTTCCTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024587 28 - 110113093 GAAGAAGCGG-TTTGATGGTTTTTCCTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751146 28 - 92844088 GAAGAAGCAG-GTTGATGACTTTTCCTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419142 28 + 96509753 GAAGAAGCAG-GTTGATGACTTTTCCTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890134 28 - 16982598 GAAGAAGCAG-GTTGATGACTTTTCCTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692079 28 - 3785965 GAAGAAGCAG-TTTGATGACTTTTCCTCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76674 28 - 179258 GAAGAAGCAG-TTTGATGACTTTTCCTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562236 28 - 5823884 GAAGAAGCAG-TTTGATGGCTTCTCCTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44535 28 + 372756 GAAGAAGTGG-TTCAATGGTTTTTCCTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281769 26 + 16356641 --AGAAGTGG-TTTGATGGGTTTTCCTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151015 28 + 1231380 GAAGAAGTGG-TTTGATGGGTTTTCCTTT i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22844972 25 + 22939663 ---CAACAGG-TTCAATGGTTTTTCTCTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181791872 28 + 182113224 GGAGAAATAGATTTAATAGTTTTCCTTC- i mm10.chr2 I 47 I 2 s canFam3.chr24 47607485 24 + 47698779 ---GAAGGGA-CCTGGCACTGTTTCCTT- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e aotNan1.NW_018500483v1 2680727 18 + 11732439 I a score=722479.000000 s hg38.chr20_KI270870v1_alt 110913 76 + 183433 CACCCCATCGGGAGAACTGATG-ACGTTTCAGCTTGTATTTTTGCCTGGGTCCATCTGTTGTCACATGGCCTCAGAC s panTro5.chr20 66437135 76 + 66533130 CACCCCATCGGAAGAACTGATG-ACGTTTCAGCTTGTATTTTTGCCTGTGTCCATCTGTTGTCACATGGCCTCAGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112275 76 + 62195757 CACCCCATCGGAAGAACTGATG-ACGTTTCAGCTTGTATTTTTGCCTGTGTCCATCTGTTGTCACATGGCCTCAGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501530 76 - 578057 CACCCCATCGGGAGAACTGATG-ACGTTTCAGCTTGTATTTTTGCCTGGGTCCATCTGTTGTCACATGGCCTCAGAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024615 76 - 110113093 CACCCCAGTGGAAGAACTGATG-ACATTTCAGCTTGTATTTTTGCCTGGGTCCATCTGCTGTCACGTGGCCTCAGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751174 76 - 92844088 CACCCCAGTGGAAGAACAGATG-ACATTTCAGCTTGTATTTTTGCCTGGGTCCATCTGTTGTCACATGGCCTCAGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419170 76 + 96509753 CACCCCAGTGGAAGAACAGATG-ACATTTCAGCTTGTATTTTTGCCTGGGTCCATCTGTTGTCACATGGCCTCAGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890162 76 - 16982598 CACCCCAGTGGAAGAACAGATG-ACATTTCAGCTTGTATTTTTGCCTGGGTCCATCTGTTGTCACATGGCCTCAGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692107 76 - 3785965 CACCCCAGTGGAAGAACAGATG-ACATTTCAGCTTGTATTTTTGCCTGGGTCCATCTGTTGTCACATGGCCTCAGAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76702 76 - 179258 CACCCCAGTGGAAGAACAGATG-ACATTTCAGCTTGTATTTTTGCCTGGGTCCATCTGTTGTCACATGGCCTCAGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562264 76 - 5823884 CACCCCAGTGGAAGAACAGATG-ACATTTCAGCTTGTATTTTTTCCTGGGTCCATCTGTTGTCACATGGCCTCAGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44563 76 + 372756 CACCCCAGTGGAAGAACTGATG-ACATTTCAGCTTGTGTTTTCGTCTGGGTCCATCTGTTGTCACATGGCCTCAGAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281795 76 + 16356641 CACTCCAGTGGAAGAGCTGATG-ACATTTCAGCTTGTGTTTTTGTCTGGGTCAGTCTGTCGTCACATGGCCTCAGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151043 76 + 1231380 CACCCCAGTGGAAGAACTGATG-ACATTTCAGCTTGTATTTTCGTCTGGGTCCATCTGTCGTCACATGGCCTCAGAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680745 76 + 11732439 CACTCCAGTGGAAGAACCGATG-ACATTTCAGCTTGTATTTTTGCCTGGGTCCATCTGTTGTCACATGGCCTCAGAC i aotNan1.NW_018500483v1 I 18 C 0 s otoGar3.GL873542 22844997 48 + 22939663 TATACCAGCAGAAGAGCTGATG----CTTCAGTATATATTCTAGACAGGGTC------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181791902 74 + 182113224 CATCCT--TGAAGGAACTGATATACACTACAGTTTGTATTTT-GATGAAGTTCAGCATCCATTACAGGACCCCAGAG i mm10.chr2 I 2 C 0 s canFam3.chr24 47607509 74 + 47698779 --CGCATGAGGAAGAGCGGGTGGGCACCGCCATTTGTCCCTTACTCCATG-CCACCTGCCGTCGTGCAGCCTTGCAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56861538 769 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=120239.000000 s hg38.chr20_KI270870v1_alt 110989 9 + 183433 TGGCTCTGC s panTro5.chr20 66437211 9 + 66533130 TGGCTCTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112351 9 + 62195757 TGGCTCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501606 9 - 578057 TGGCTCTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024691 9 - 110113093 TGGCTCTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751250 9 - 92844088 TGGCTCTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419246 9 + 96509753 TGGCTCTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890238 9 - 16982598 TGGCTCTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692183 9 - 3785965 TGGCTCTGC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76778 9 - 179258 TGGCTCTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562340 9 - 5823884 TGGCTCTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44639 9 + 372756 AGACTCTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281871 9 + 16356641 AGGCTCTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151119 9 + 1231380 AGGCTCTGC i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2680821 9 + 11732439 AGGCTCTGC i aotNan1.NW_018500483v1 C 0 I 14 s micMur3.chr18 56862307 9 + 57149010 TGGCTCTGC i micMur3.chr18 I 769 C 0 s otoGar3.GL873542 22845045 8 + 22939663 -GACTCTGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181791976 9 + 182113224 AGGTTTTGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47607583 9 + 47698779 CGGCTCTGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I a score=96492.000000 s hg38.chr20_KI270870v1_alt 110998 16 + 183433 CAGAGGCGAAGACTAG s panTro5.chr20 66437220 16 + 66533130 CAGAGGCGAAGACTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112360 16 + 62195757 CAGAGGCGAAGACTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501615 16 - 578057 CGGAGGCAAAGACTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024700 16 - 110113093 TGGAGGCGCAGACTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751259 16 - 92844088 TGGAGGCGAAGACTAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419255 16 + 96509753 TGGAGGCGAAGACTAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890247 16 - 16982598 TGGAGGCGAAGACTAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692192 16 - 3785965 TGGAGGCGAAGACTAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76787 16 - 179258 TGGAGGCGAAGACTAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562349 16 - 5823884 TGGAGGCGAAGACTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44648 7 + 372756 TGGaggg--------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281880 7 + 16356641 TGGaggg--------- i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56862316 16 + 57149010 TAGAGGCGAAGGTTAG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22845053 16 + 22939663 TAGAGGGGAAGGATGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181791985 15 + 182113224 -TGAGGCAGGAGTTGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47607592 16 + 47698779 CGGACGAGCGGGCTGG i canFam3.chr24 C 0 I 2 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I e cebCap1.NW_016107870v1 1151128 1 + 1231380 I e aotNan1.NW_018500483v1 2680830 14 + 11732439 I a score=14903.000000 s hg38.chr20_KI270870v1_alt 111014 2 + 183433 GG s panTro5.chr20 66437236 2 + 66533130 GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112376 2 + 62195757 GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501631 2 - 578057 GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024716 2 - 110113093 GG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751275 2 - 92844088 GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419271 2 + 96509753 GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890263 2 - 16982598 GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692208 2 - 3785965 GG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76803 2 - 179258 GG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562365 2 - 5823884 GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44655 2 + 372756 tt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281887 2 + 16356641 tt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151129 2 + 1231380 GG i cebCap1.NW_016107870v1 I 1 C 0 s micMur3.chr18 56862332 2 + 57149010 GG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22845069 2 + 22939663 GG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181792000 2 + 182113224 AG i mm10.chr2 C 0 C 0 s canFam3.chr24 47607610 2 + 47698779 GG i canFam3.chr24 I 2 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I e aotNan1.NW_018500483v1 2680830 14 + 11732439 I a score=103127.000000 s hg38.chr20_KI270870v1_alt 111016 9 + 183433 AAGGTTAGG s panTro5.chr20 66437238 9 + 66533130 AAGGTTAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112378 9 + 62195757 AAGGTTAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501633 9 - 578057 AAGGTTAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024718 9 - 110113093 AAGGTTAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751277 9 - 92844088 AAGGTTAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419273 9 + 96509753 AAGGTTAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890265 9 - 16982598 AAGGTTAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692210 9 - 3785965 AAGGTTAGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76805 9 - 179258 AAGGTTAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562367 9 - 5823884 GAGGTTAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44657 9 + 372756 agggttggg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281889 9 + 16356641 agggttagg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151131 9 + 1231380 AGGGTTAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680844 9 + 11732439 agggttggg i aotNan1.NW_018500483v1 I 14 C 0 s micMur3.chr18 56862334 9 + 57149010 AGGATTAGG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22845071 9 + 22939663 AGGGTTACG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181792002 4 + 182113224 -----GAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47607612 9 + 47698779 AAGGCGGGG i canFam3.chr24 C 0 I 150 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I a score=79408.000000 s hg38.chr20_KI270870v1_alt 111025 6 + 183433 GTTGGG s panTro5.chr20 66437247 6 + 66533130 GTTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112387 6 + 62195757 GTTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501642 6 - 578057 GTTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024727 6 - 110113093 GTTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751286 6 - 92844088 GTTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419282 6 + 96509753 GTTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890274 6 - 16982598 GTTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692219 6 - 3785965 GTTGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76814 6 - 179258 GTTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562376 6 - 5823884 GTTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44666 6 + 372756 gttagg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281898 6 + 16356641 gttggg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151140 6 + 1231380 GTTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2680853 6 + 11732439 gttggg i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56862343 6 + 57149010 GCTGGG i micMur3.chr18 C 0 I 289 s otoGar3.GL873542 22845080 6 + 22939663 GTTTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181792006 6 + 182113224 GCTGGG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607621 150 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I a score=151604.000000 s hg38.chr20_KI270870v1_alt 111031 16 + 183433 GTT------------------------------------AGCATCTTTGAGA s panTro5.chr20 66437253 16 + 66533130 GTT------------------------------------AGCATCTTTGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112393 16 + 62195757 GTT------------------------------------AGCATCTTTGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501648 16 - 578057 GTT------------------------------------AGCATCTTTGAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024733 16 - 110113093 ATT------------------------------------AGCATCTTTGAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751292 16 - 92844088 GTT------------------------------------AGCATCTTTGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419288 16 + 96509753 GTT------------------------------------AGCATCTTTGAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890280 16 - 16982598 GTT------------------------------------AGCATCTTTGAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692225 16 - 3785965 GTT------------------------------------AGCATCTTTGAGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76820 16 - 179258 GTT------------------------------------AGCATCTTTGAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562382 16 - 5823884 GTT------------------------------------AGCATCTTTGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44672 16 + 372756 gtt------------------------------------agCATCTTTGAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281904 52 + 16356641 gttagggttagggttgcggttagggttagggttggggtcagCATCTTTGAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151146 16 + 1231380 GTC------------------------------------AGCATCTTTGAGA i cebCap1.NW_016107870v1 C 0 I 153 s aotNan1.NW_018500483v1 2680859 16 + 11732439 gtc------------------------------------agcgtCTTTGAGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22845086 16 + 22939663 GCT------------------------------------GGCGTCTTCAAGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181792012 16 + 182113224 ATC------------------------------------AATATCTTAGAGA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607621 150 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56862349 289 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=12000.000000 s hg38.chr20_KI270870v1_alt 111047 1 + 183433 C s panTro5.chr20 66437269 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112409 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501664 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024749 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751308 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419304 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890296 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692241 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76836 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562398 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44688 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281956 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2680875 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22845102 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181792028 1 + 182113224 C i mm10.chr2 C 0 I 52 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607621 150 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56862349 289 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e cebCap1.NW_016107870v1 1151162 153 + 1231380 I a score=451692.000000 s hg38.chr20_KI270870v1_alt 111048 67 + 183433 AGCGAGGCGCTGACAACACCGAGTTCAGGACCATCTCCAAGTTCAGAGAGAGAACACGT---------------CTGTAGCT s panTro5.chr20 66437270 67 + 66533130 AGCGAGGCGCCGACAACACCGAGTTCAGGACCATCTCCAAGTTCAGAGAGAGAACACGT---------------CTGTAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112410 67 + 62195757 AGCGAGGCGCCGACAACACCGAGTTCAGGACCATCTCCAAGTTCAGAGAGAGAACACGT---------------CTGTAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501665 66 - 578057 AGCGAGGTGCCGACAACACCGAGTTCAGGACCATCTCCAA-TTCAGAGAGAGAACACGT---------------CTGTAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024750 67 - 110113093 AGCGAGGTGCCGACAACACTGAGTTCAGGACCATCTCCAAATTCAGAGAGAGAACACGT---------------CTGTAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751309 67 - 92844088 AGCAAGTCGCCAACAACCCCGAGTTCAGGACCATCTCCACGTTCAGAGAGAGAACGCAT---------------CTGTAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419305 67 + 96509753 AGCAAGTCGCCAACAACCCCGAGTTCAGGACCATCTCCACGTTCAGAGAGAGAACGCAT---------------CTGTAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890297 67 - 16982598 AGCAAGTCGCCAACAACCCCGAGTTCAGGACCGTCTCCACGTTCAGAGAGAGAACACAT---------------CTGTAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692242 67 - 3785965 AGCAAGTCGCCAACAACCCAGAGTTCAGGACCATCTCCACGTTCAGAGAGAGAACACAT---------------CTGTAGCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76837 67 - 179258 AGCAAGTCGCCAACAACCCAGAGTTCAGGACCATCTCCACGTTCAGAGAGAGAACACAT---------------CTGTAGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562399 67 - 5823884 AGCAAGTCGCCAACAACCCCGAGTTCAGGACCATCTCCAAGTTCAGAGAGAGAGCACAT---------------CTGTAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44689 82 + 372756 AGCGAGGTGCCGACAACACTGAGTTCAGGGCCACCTCTGAGCTCAGAGAGAGAACACGTCTGTGTCCTGACTCCCTGCAGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16281957 64 + 16356641 AGCAAGGCGCCGACAGCCCTGAGT------------------TCAGAGAGGGAACACATCTGCGTCCTGACTCCCTGTAGCT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2680876 82 + 11732439 AACGGGGCGCTGATGCCGCCGAGTTCAGGACCACCTCTGAGTTCAGAGAGAGAACACATCTGTGTCCTGAGTCCCTGTAGCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22845103 74 + 22939663 AGTGTGACATTGCC--------GTTCAGGGCCATCTCCAAGTTCAGAGTGAGACCACACCTGTGTCCTGACTCCTTGTAGCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607621 150 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181792029 52 + 182113224 I e micMur3.chr18 56862349 289 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e cebCap1.NW_016107870v1 1151162 153 + 1231380 I a score=191971.000000 s hg38.chr20_KI270870v1_alt 111115 29 + 183433 CACCCTTCTTCTTCTGGCG-CCTTCCTCCT s panTro5.chr20 66437337 29 + 66533130 CACCCTTCCTCTTCTGGTG-CCTTCCTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112477 29 + 62195757 CACCCTTCCTCTTCTGGCG-CCTTCCTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501731 29 - 578057 CACCCTTCCTCTTCTGGCG-CCTTCCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024817 28 - 110113093 CA-CCTTCGTCTTCTGGCG-CCTTGCTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751376 29 - 92844088 CACCCGTCCTCTTCTGGAG-CCTTGCTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419372 29 + 96509753 CACCCGTCCTCTTCTGGAG-CCTTGCTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890364 29 - 16982598 CACCCGTCCTCTTCTGGAG-CCTTGCTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692309 29 - 3785965 CACCCTTCCTCTTCTGGAG-CCTTGCTCCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76904 29 - 179258 CACCCTTCCTCTTCTGGAG-CCTTGCTCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562466 26 - 5823884 GACC---CTTCTTCTGGAG-CCTTGCTCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44771 27 + 372756 CACCCTTCC-CTTCTGGTG-CCTT-CTCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282021 28 + 16356641 CACCCTTCC-CTTCCGGAG-CCTTGCTCCT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2680958 23 + 11732439 CACCCTTCC-CTTCTGGTG------CTCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22845177 30 + 22939663 CACTATTCCTCTTCTGGGGGCCTGGCTTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181792081 29 + 182113224 TACCTTTCTTCATCTGGGG-TCCTTCTCGG i mm10.chr2 I 52 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e canFam3.chr24 47607621 150 + 47698779 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56862349 289 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e cebCap1.NW_016107870v1 1151162 153 + 1231380 I a score=207443.000000 s hg38.chr20_KI270870v1_alt 111144 33 + 183433 TGAGCCACTGGCCAACTCCCACCCAGATGA-------------------------CTG s panTro5.chr20 66437366 33 + 66533130 TGAGCCACTGGCCAACTCCCACCCAGATGA-------------------------CTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112506 33 + 62195757 TGAGCCACTGGCCAACTCCCACCCAGATGA-------------------------CTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501760 33 - 578057 TGAGCCACCGGCCAACTCCCACCCAGATGA-------------------------CTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024845 33 - 110113093 TGAGCCACTGGCCAACTCCCGCCCAGATGA-------------------------CTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751405 58 - 92844088 TGAGCCACTGGCCAACTCCCACCCAGATGACAGGAGGGAGCGGGGGATCTTCTACCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419401 58 + 96509753 TGAGCCACTGGCCAACTCCCACCCAGATGACAGGAGGGAGCGGGGGATCTTCTACCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890393 58 - 16982598 TGAGCCACTGGCCAACTCCCACCCAGATGACAGGAGGGAGCGGGGGATCTTCTACCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692338 58 - 3785965 TGAGCCACTGGCCAACTCCCACCCAGATGACAGGAGGGAGTGGGGGATCTTCTACCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76933 58 - 179258 TGAGCCACTGGCCAACTCCCACCCAGATGACAGGAGGGAGTGGGGGATCTTCTACCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562492 54 - 5823884 GGAGCCACTGGCCAACGCCCACCCAGATGACGGGAGGGAGTGGGGGATCT----CCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44798 33 + 372756 TGAGTTGTTGGCCAATTCCCAACCAGATGACAG------------------------- i calJac3.chrUn_GL286459 C 0 I 25 s saiBol1.JH378156 16282049 33 + 16356641 TGAGTTGTTGGCCAATTCCAAGCCAGGTGACAG------------------------- i saiBol1.JH378156 C 0 I 27 s aotNan1.NW_018500483v1 2680981 33 + 11732439 TGAGTTGTTGGCCAATTCCCAGCCAGATGACAG------------------------- i aotNan1.NW_018500483v1 C 0 I 31 s otoGar3.GL873542 22845207 31 + 22939663 TTCATCAGTGGCCAGCTCCCATCCAGAAAAC--------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181792110 28 + 182113224 TGAGCCA-TAGCCAGCTCCTG-TCAGAGGA---------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47607771 33 + 47698779 TGGCTCAGTGGCTGGCTCCTGCCTCGGGGACAG------------------------- i canFam3.chr24 I 150 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56862349 289 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e cebCap1.NW_016107870v1 1151162 153 + 1231380 I a score=114199.000000 s hg38.chr20_KI270870v1_alt 111177 13 + 183433 CCCCAGGAGAGGG s panTro5.chr20 66437399 13 + 66533130 CCCCAGGAGAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112539 13 + 62195757 CCCCAGGAGAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501793 13 - 578057 TCCCAGGAGAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024878 13 - 110113093 CCCCAGGAGAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751463 13 - 92844088 CCCCAGGAGAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419459 13 + 96509753 CCCCAGGAGAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890451 13 - 16982598 CCCCAGGAGAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692396 13 - 3785965 CCCCAGGAGAGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 76991 13 - 179258 CCCCAGGAGAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562546 13 - 5823884 CCCCAGGAGAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44856 13 + 372756 CCCCAGGGGAGGG i calJac3.chrUn_GL286459 I 25 C 0 s saiBol1.JH378156 16282109 13 + 16356641 CCCCAGGGGAGGG i saiBol1.JH378156 I 27 C 0 s otoGar3.GL873542 22845238 9 + 22939663 ----AGGAGAGAG i otoGar3.GL873542 C 0 I 21 s mm10.chr2 181792138 10 + 182113224 ---CAGGTGAGTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47607804 13 + 47698779 GACCAGGTGGGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56862349 289 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e cebCap1.NW_016107870v1 1151162 153 + 1231380 I e aotNan1.NW_018500483v1 2681014 31 + 11732439 I a score=823005.000000 s hg38.chr20_KI270870v1_alt 111190 112 + 183433 AGGGA-----------------AGGCAGGGAAGGCAGTGTCTTCAAAGGCTA-GTAGCTGAAGCATGGGGCTCCAGGCTGGGATTCAGTTCCTC----TCCTGACTTG--TCTCCTTTGACGCCT---ACT----TTTCAAGT s panTro5.chr20 66437412 112 + 66533130 AGGGA-----------------AGGCAGGGAAGGCAGTGTCTTCAAAGGCTA-GTAGCTGAAGCATGGGGCTCCAGGCTGGGATTCAGTTCCTC----TCCTGACTTG--TCTCCTTTGACGCCT---ACT----TTTCAAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112552 112 + 62195757 AGGGA-----------------AGGCAGGGAAGGCAGTGTCTTCAAAGGCTA-GTAGCTGAAGCATGGGGCTCCAGGCTGGGATTCAGTTCCTC----TCCTGACTTG--TCTCCTTTGACGCCT---ACT----TTTCAAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501806 112 - 578057 AGGGA-----------------AGGCAGCGAAGGCAGTGTCTTCAAAGGCTA-GTAGCTGAAGCATGGGGCTCCAGGCTGGGATTCAGCTCCTC----TCCTGACTTG--TCTTCTTTGACGCCT---ACT----TTTCAAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110024891 111 - 110113093 AGGGA-----------------AGGCAGGGAAAGCAGTGCCTTCAAAGGCTG-GTAGCTGAAGCATGGGGCTCCAGGCTGGGATTCAGCTCCTC----TCCTGACTTG--TCTTCTTT-ACGCCT---ACT----TTTCAAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751476 111 - 92844088 AGGGA-----------------AGGCAGGGAAGGCAGTGTCTTCAAAGGCT--GTAGCTGAAGCACGGGGCTCCAGGCTGGGATTCGGCTCCTC----TCCCGACTTG--TCTTCTTTGAGGCCT---ACT----TTTCAAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419472 111 + 96509753 AGGGA-----------------AGGCAGGGAAGGCAGTGTCTTCAAAGGCT--GTAGCTGAAGCACGGGGCTCCAGGCTGGGATTCGGCTCCTC----TCCCGACTTG--TCTTCTTTGAGGCCT---ACT----TTTCAAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890464 111 - 16982598 AGGGA-----------------AGGCAGGGAAGGCAGTGTCTTCAAAGGCT--GTAGCTGAAGCACGGGGCTCCAGGCTGGGATTCGGCTCCTC----TCCCGACTTG--TCTTCTTTGAGGCCT---ACT----TTTCAAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692409 111 - 3785965 AGGGA-----------------AGGCAGGGAAGGCTGTGTCTTCAAAGGCT--GTAGCTGAAGCACAGGGCTCCAGGCTGGGATTCGGCTCCTC----TCCCGACTTG--TCTTCTTTGAGGCCT---ACT----TTTCAAGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77004 111 - 179258 AGGGA-----------------AGGCAGGGAAGGCTGTGTCTTCAAAGGCT--GTACCTGAAGCACGGGGCTCCAGGCTGGGATTCGGCTCCTC----TCCCGACTTG--TCTTCTTTGAGGCCT---ACT----TTTCAAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562559 111 - 5823884 AGGGA-----------------AGGCAGGGAAGGCAGTGTCTTCAAAGGCT--GTAGCTGAAGCACGGGACTCCAGGCTGGGATTTGCCTCCTC----TCCCGACCTG--TCTTCTTTGATGCCT---ACT----TTTCAAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44869 106 + 372756 --------------------------AGGGAAAGCAGTGCCTGCAAAGGATG-GTAGCTGAAGCTTGGGGCCCCAAGCCAGGCTTCAGCCCCTC----TCCTGCCTTG--CCATCTTCAATGCCA---AGTGTGGGTTCCAG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282122 103 + 16356641 --------------------------GGAGAAGGCTGTGCCTTCAAAGGATA-GTAGTTGAAGCATGGGGCCCCCAGCCAGGCTTCAACCCCTC----TCCCTACTTG--CCATCTTCAACGCCA---ACT----TTTCCAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151315 112 + 1231380 AGGGG-----------------AGGGAGGGAAGGCTGTGTCTTCAAAGGATG-GTAGCTGAAGCATGGAGACCCAAGCCGGGCTTCATCTCCTC----TCCTGACTTG--CCATCTTCAATGCCA---ACT----TTTCCATT i cebCap1.NW_016107870v1 I 153 C 0 s aotNan1.NW_018500483v1 2681045 110 + 11732439 AGGGG-----------------AGGGAGGGAAGGCAGCGCCTTCACAGGACG-GAAGCTGAAGCATG--GCCCCAAGCCGGGCTTCAGCCCCTC----TCCTGACTTG--CCGTCTTCAATGCCA---ACG----TTTCAAGC i aotNan1.NW_018500483v1 I 31 C 0 s otoGar3.GL873542 22845268 86 + 22939663 AGGGA-----------------TGGGAGGGAAACAAGT-CCTTTAGAGGTTG-GTAACTGAAGCACC-AGCCCCAGGCTGGG------------------------------CCCCTTGGTACCT---ATT----GTACCTGC i otoGar3.GL873542 I 21 C 0 s mm10.chr2 181792148 130 + 182113224 AAAGATTCCTATCACCCACATTGGGGAAGGGAGTCAGTCCCTTTAAAGGGGGAGTGGTTAGGTCATGATGCTCTAGCCTGGGATTTGGACTCTT----CCCAAAATTA--GGTTCTTAGATGCCTGTGGCT----TGTCT--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47607817 94 + 47698779 -GGGA-----------------GGTTAGGG-----------------------TTTGCTG-GGCACGGGGCTTCCGCTGGGGATTTGGCCCCTCCTGGCCTCGGCCTGGACTTCCCTTCACGCCC---GCT----GTTTGTGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1856584 1116 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56862349 289 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=414406.000000 s hg38.chr20_KI270870v1_alt 111302 44 + 183433 TTGGG-------TCCCTCAGAGCTGTCA---------TGCAGGATGCCAGCTGAGGGGTG s panTro5.chr20 66437524 44 + 66533130 TTGGG-------TCCCTCAGAGCTGTCA---------TGCAGGATGCCAGCTGAGGGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112664 44 + 62195757 TTGGG-------TCCCTCAGAGCTGTCA---------TGCAGGATGCCAGCTGAGGGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501918 44 - 578057 TTGGG-------TCCCTCAGAGCTGTCA---------TGCAGGATGCCAGCTGAGGGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025002 44 - 110113093 TTGGG-------TCCCTCAGAGCTGTCA---------TGCAGGATGCCAGCTGAGGGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751587 44 - 92844088 TTCGG-------TCCCTCAGCGCTCTCA---------TGCAGGATGCCAGCCGAGGGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419583 44 + 96509753 TTCGG-------TCCCTCAGCGCTCTCA---------TGCAGGATGCCAGCCGAGGGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890575 44 - 16982598 TTCGG-------TCCCTCAGAGCTCTCA---------TGCAGGATGCCAGCCGAGGGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692520 44 - 3785965 TTCGG-------TCCCTCAGAGCTCTCA---------TGCAGGATGCCAGCCGAGGGGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77115 44 - 179258 TTCGG-------TCCCTCAGAGCTCTCA---------TGCAGGATGCCAGCCGAGGGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562670 44 - 5823884 TTCGG-------TCCCTCAGAGCTGTCA---------TGCAGGATGCCAGCTGAGGGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 44975 59 + 372756 GTGAGCTGACCTCTCCTCAGC-TCACCTGGTAAGCTATGCAGGTTGCCAGCTGAGGGGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282225 44 + 16356641 GTGGG-------TTCCTCAGAGTCACCC---------TGCAGGTTGCCAGCGGAGGGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151427 44 + 1231380 GTGGG-------TTCCTCAGAGCCACCC---------TGCAGGCTGCCAGCTGAGGGGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681155 43 + 11732439 GTGGG--------TCCTCAGAGCCGCCA---------TGCAGGTGGCCGGCTGAGGGGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56862638 44 + 57149010 TTGGG-------TCCCTCCCAGCTGCCA---------TGCAGGATGTCTGCTGAGGGGTG i micMur3.chr18 I 289 C 0 s proCoq1.NW_012150197v1 1857700 44 - 2029793 TTGGG-------TCCCTCACAGCTGCCA---------CGCAGGATGCCTGCTGAGGGGTG i proCoq1.NW_012150197v1 I 1116 I 362 s otoGar3.GL873542 22845354 41 + 22939663 TTGGG-------TCCCTCCAAGCTGTAA-----------CAGGGTCCCT-TGGAGGTATG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181792278 39 + 182113224 -TTGG-------ACCCTCAGAGCCGCCA-------------AAGTACCTATTGAGAGGTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47607911 36 + 47698779 CTGGA---------CCTGAGTGGTCCCC-------------GGCTCCCGGCGACGCTG-- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I a score=371684.000000 s hg38.chr20_KI270870v1_alt 111346 38 + 183433 ACTGTGGGCCACACCCTCTTC---CCAGCCTCACGTGCATC s panTro5.chr20 66437568 38 + 66533130 ACTGTGAGCCACACCCTCTTC---CCAGCCTCACGTGCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112708 38 + 62195757 ACTGTGAGCCACACCCTCTTC---CCAGCCTCACGTGCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 501962 38 - 578057 ACTGTGAGCCACACCCTCTTC---CCAGCCTCACGTGCATC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025046 38 - 110113093 ACTGTGAGCCACACCCTCTTC---CCAGCCTCACTTGCGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751631 38 - 92844088 ACTGTGAGCCACACCCTCTTC---CCAGCCTCACGTGCGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419627 38 + 96509753 ACTGTGAGCCACACCCTCTTC---CCAGCCTCACGTGCGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890619 38 - 16982598 ACTGTGAGCCACACCCTCTTC---CCAGCCTCACGTGCATC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692564 38 - 3785965 ACTGTGAGCCACACCCTCTTC---CCAGCCTCACGTGCGTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77159 38 - 179258 ACTGTGAGCCACACCCTCTTC---CCAGCCTCACGTGCGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562714 38 - 5823884 ACTGTGAGCCACACCCTCTCC---CCAGCCTCACGTGCGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45034 38 + 372756 ACTGTGAGCCACACCCTCTTT---CCAGCCTCAGGTGCATC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282269 38 + 16356641 CCTGTGAGCTGCACCCTCTTC---CCACCCTCAGGGGCATC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151471 36 + 1231380 AC--TGAGCCGCACCCTTTTC---CCAGCCTCAGCTGCACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681198 38 + 11732439 ACTGTGAGCCGCACCCTCTTC---CCAGCCTCGGGTGCATC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56862682 38 + 57149010 GCTGTGAGCCATGCCCTCTGC---CAAGCCTCACCTGCATC i micMur3.chr18 C 0 I 346 s otoGar3.GL873542 22845395 35 + 22939663 GGTGTGGACCATGCCCTCTGG---CAAGCCTCAC---CATT i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181792317 34 + 182113224 CCCATCAGTCA-GTCCTCAGC---T---CTTTACCTGTTCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47607947 40 + 47698779 AGTGCGAG-CAGGCCCTCGGCAAGCCGCCCTCCTGTTGGCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1857744 362 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I a score=518453.000000 s hg38.chr20_KI270870v1_alt 111384 54 + 183433 CTTTCCTCACATCTCTGACACCAGCCCTAGTCAGAGCT-GGGGAGTCAAGGCTGG s panTro5.chr20 66437606 54 + 66533130 CTTTCCTCACATCTCTGACACCAGCCCTAGTCAGAGCT-GGGGAGTCAAGGCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112746 54 + 62195757 CTTTCCTCACATCTCTGACACCAGCCCTAGTCAGAGCT-GGGGAGTCAAGGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502000 54 - 578057 CTTTCCTCACATCTCTGACACCAGCCCTAGTCAGAGCT-GGGGAGTCAAGGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025084 55 - 110113093 CTTTCCTCACATCTCTGACACCAGCCCTAGTCGGAGCTGGGGGAGTCAAGGCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92751669 54 - 92844088 CTTTCCTCGCATCTCTGACACCAGCCCTAGTCAGAGCT-GAGGAGTCAAGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419665 54 + 96509753 CTTTCCTCGCATCTCTGACACCAGCCCTAGTCAGAGCT-GAGGAGTCAAGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890657 54 - 16982598 CTTTCCTCGCATCTCTGACACCAGCCCTAGTCAGAGCT-GAGGAGTCAAGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692602 54 - 3785965 CTTTCGTCGCATCTCTGACACCAGCCCTAGTCAGAGCT-GAGGAGTCAAGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77197 54 - 179258 CTTTCGTCGCATCTCTGACACCAGCCCTAGTCAGAGCT-GAGGAGTCAAGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562752 54 - 5823884 CTTTCCTCGCATCTCTGACACCAGCCCTAGTCAGAGCT-GAGGAGTCAAGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45072 54 + 372756 CTTTCCTTGTATCTCTGACACCAGCCCCCATCACAGGT-GGGGAGTCAAGGCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282307 54 + 16356641 CTTTCCTTGCATCCCTGACATCAGCCCCCATCACAGGT-GGGGAGTCAAGGCTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151507 54 + 1231380 CTTTCCTTGCATCTCTGACACCAGCCCCCATCACAGGT-GGGGAGTCAAGGCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681236 54 + 11732439 CTCTCCTTGCATCTCTGACACCAGCCCCCGTCACAGGT-GGAGAGTCAAGGCTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22845432 54 + 22939663 ATTTCCTGGCATCTGTGGCACCAGCCCTACTCACACAC-TGGGAGCCCAGGCAGG i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181792351 51 + 182113224 ATTTGCTTGGGTCTCAGATCCTGGCTTCAGTAACA----TGAGATCCAAGACCAG i mm10.chr2 C 0 I 526 s canFam3.chr24 47607987 43 + 47698779 ---------TGTCCCTGCCAC--ACTCCGGGAGCCCCT-GGGGAGTCCAGGGAGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1857744 362 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56862720 346 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=26056.000000 s hg38.chr20_KI270870v1_alt 111438 3 + 183433 -----GGA--- s panTro5.chr20 66437660 3 + 66533130 -----GGA--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112800 3 + 62195757 -----GGA--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502054 3 - 578057 -----GGA--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025139 3 - 110113093 -----GGA--- i nomLeu3.chr13 C 0 M 423 s rheMac8.chr10 92751723 3 - 92844088 -----GGA--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419719 3 + 96509753 -----GGA--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890711 3 - 16982598 -----GGA--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692656 3 - 3785965 -----GGA--- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77251 3 - 179258 -----GGA--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562806 3 - 5823884 -----GGA--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45126 3 + 372756 -----GGA--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282361 3 + 16356641 -----GGA--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151561 3 + 1231380 -----GGA--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681290 3 + 11732439 -----GGA--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22845486 3 + 22939663 -----GGA--- i otoGar3.GL873542 C 0 I 7 s canFam3.chr24 47608030 11 + 47698779 GGTTTGGCCGA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1857744 362 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181792402 526 + 182113224 I e micMur3.chr18 56862720 346 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I a score=740860.000000 s hg38.chr20_KI270870v1_alt 111441 106 + 183433 ATT---------------------------------CCCTCCTCCCGGAGA-AAAGAGGCTCGGGAGTCCTGGAGCCCTGGCCGTCTTCCTCTCCCTACAACTCTGGCCCTGAGCACCCAGAGGACATCAGGAAATA--AGA s panTro5.chr20 66437663 106 + 66533130 ATT---------------------------------CCCTCCTCCCGGAGA-AAAGAGGCTTGGGAGTCCTGGAGCCCTGGCCGTCTTCCTCTCCCTACAACTCTGGCCCTGAGCACCCAGAGGACATCAGGAAATA--AGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112803 106 + 62195757 ATT---------------------------------CCCTCCTCCCGGAGA-AAAGAGGCTCGGGAGTCCTGGAGCCCTGGCCGTCTTCCTCTCCCTACAACTCTGGCCCTGAGCACCCAGAGGACATCAGGAAATA--AGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502057 106 - 578057 ATT---------------------------------CCCTCCTCCCAGAGA-AAAGAGGCTCAGGAGTCCTGGAGCCCTGGCCGTCTTCCTCTCCCTACAACTCTGGCCCTGAGCACCCAGAGGACATCAGGAAATA--AGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92751726 106 - 92844088 ATT---------------------------------CCCTCCTCCCAGAGA-AAAGAGGCTCAGGAGTCCTGGCGCCCTGGCCGTCTTCCTCTCCCTACAGCTCTGGCCCTGAGCACCCAGAGGGCATCAGTAAGTA--AGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419722 106 + 96509753 ATT---------------------------------CCCTCCTCCCAGAGA-AAAGAGGCTCAGGAGTCCTGGCGCCCTGGCCGTCTTCCTCTCCCTACAGCTCTGGCCCTGAGCACCCAGAGGGCATCAGTAAGTA--AGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890714 106 - 16982598 ATT---------------------------------CCCTCCTCCCAGAGA-AAAGAGGCTCAGGAGTCCTGGCGCCCTGGCCGTCTTCCTCTCCCTACAGCTCTGGCCCTGAGCACCCAGAGGGCATCAGTAAGTA--AGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692659 106 - 3785965 ATT---------------------------------CCCTTCTCCCAGAGA-AAAGAGGCTCAGGAGTCCTGGAGCCCTGGCCGTCTTCCTCTCCCTACAGCTCTGGCCCTGAGCACCCAGAGGGCATCAGTAAATA--AGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77254 106 - 179258 ATT---------------------------------CCCTCCTCCCAGAGA-AAAGAGGCTCAGGAGTCCTGGAGCCCTGGCCGTCTTCCTCTCCCTACAGCTCTGGCCCTGAGCACCCAGAGGGCATCAGTAAATA--AGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562809 105 - 5823884 ATT----------------------------------CCTCCTCCTGGAGA-AAAGAGGCTCAGGAGTCCTGGAGCCCTGGCCGTCTTCCTCTCCCTACGGCTCTGGCCCTGAGCACCCAGAGGGCATCAGTAAATA--AGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45129 97 + 372756 ATT---------------------------------CCCTCCTCCCAGAG--AAAGAGGCTCTGGAGTCCTGGAGCCCTGGTCATCTTCCTCTCCCTATAGCCCTAGC--------CCCAGAGGAAGTCAGTGAATA--AGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282364 105 + 16356641 ATT---------------------------------CCCTCCTCTCAGAG--AAAGAAGCTCTGGAGTCCTGGAGCCCGAGTCATGTTCCTCTCCTTACAGCCCCGGCCCTGAGCACCCAGAGGAAATCGGTGAATA--AGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151564 101 + 1231380 ATT---------------------------------CCCTCCTCCCGGAG--AAAGAGGCTCTGGAGTCCTGGAGCCCTGGTCACCTTCCTCTCCCTGCAGCCCCAGCCATAAGCACCCAGAGGAAATCAG----TA--AGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681293 105 + 11732439 ATT---------------------------------ACCTCCTCCCAGAG--AAAGAGGCTCTGGAGTCCTGGAGCCCTGGTCATCTTCCTCTCCCTACAGCCCCAGCCCTGAGCACCCAGAGGAGATCAGTGAACA--AGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22845496 113 + 22939663 ATTAGCTGTTAAGCAGCATGGTAGACTCAGTTCTGTCCCTTCTCCCACAGAGGGAGATGCTCTCTGGTCTGGGAACCCTTACCAGCTCCCTCCCT-----------------------------AAATCGACAGACACTGTA i otoGar3.GL873542 I 7 C 0 s canFam3.chr24 47608041 89 + 47698779 --------------------------------ATGTGCCTCATCCGAGCGG-GGAGAGGCTCCCGGGCCC-GGAGCTGGTGCTG----------------GTTCTGGCCCCGAGC-CCCCGGGGGCACCAGGGCTGC--CGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1857744 362 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181792402 526 + 182113224 I e micMur3.chr18 56862720 346 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e nomLeu3.chr13 110025142 423 - 110113093 M a score=738453.000000 s hg38.chr20_KI270870v1_alt 111547 98 + 183433 GCTGAGTGTGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCACGA-CACCCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CACTCGG---------------CTGTGGGGTG s panTro5.chr20 66437769 98 + 66533130 GCTGAGTGTGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCACGA-CACCCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CACTCGG---------------CTGTGGGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62112909 98 + 62195757 GCTGAGTGTGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCACGA-CACCCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CACTCGG---------------CTGTGGGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502163 97 - 578057 GCTGAGTGTGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCACGA-CA-CCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CACTCGG---------------CTGTGGGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92751832 98 - 92844088 GCTGGGTGTGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCATGG-CACCCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CCCTCGG---------------CTGTGGGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419828 98 + 96509753 GCTGGGTGTGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCATGG-CACCCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CCCTCGG---------------CTGTGGGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890820 98 - 16982598 GCTGGGTGTGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCATGG-CACCCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CCCTCGG---------------CTGTGGGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692765 98 - 3785965 GCTGGGTGTGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCATGG-CACCCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CCCTCGG---------------CTGTGGGGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77360 98 - 179258 GCTGGGTGTGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCATGG-CACCCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CCCTCGG---------------CTGTGGGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5562914 98 - 5823884 GCTGGGTATGCTTGCAGGTGAA------CTG------CAGGGCTGGCAT--CTGCTGGCATGA-CACCCTTGGAGGCCCTGGCTGGGTCTCTTGTC--------------CCCTCGG---------------CTGAGGGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45226 97 + 372756 GCTGGA-GTGCTTGCAGGTGAA-----GCGG------CAGGGCTGTCAT--CTGCTGTGGTAA-CACCCCTGGAGGCCCTGGC-AGGTCTCTGGTC--------------CGCTCGG---------------CTGTGGGGTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282469 98 + 16356641 GCCGGA-GTGCTTGCAGTTGAA-----GCGG------CAGGGCTGGCAT--CTGCTGGGGTAA-CACCCCTGGAGGCCCTGGCTGGGTCTCTGGTC--------------CACTCGG---------------CTGTGGGGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151665 98 + 1231380 GCTGGA-GTGCTTGCAGGCGAA-----GCAG------CAGGGCCGGCAT--CTGTTGGGGTAA-CACCCCTGGAGGCCCTGGCTGGATCTCTGGCC--------------CACTTGG---------------CTGTGAGGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681398 98 + 11732439 GCCCGA-GTGCTTGCAGGCGAA-----GCGG------CAGGGCTGGCAT--CTGCTGGGGTGA-CACCCCTGGAGGCCCTGGCCGGGTCTCTGGTC--------------CACTCCG---------------CTGTGGGGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22845609 107 + 22939663 GCCAGT-GTGCTCATAGGC---------C--------CAAGGCCTCTGT--CTGCCTGCATGATTGCCTCTGGAGACCCAGGCCTGGCTTCCTGTCAGCTCCACCTGATGCCCTTGG---------------CTGCTGTGTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181792928 101 + 182113224 GCTTGGTGTGCTCACAGATTAC-----CCTGGAGGCTCAAGACTGATGT--CTGATCTCATTA-CAGTATCTGAAGCTCTGGCTAGATCTCATGT---------------CACTCTG---------------ATGTTTC--- i mm10.chr2 I 526 C 0 s canFam3.chr24 47608130 117 + 47698779 ACTGGGGGGGCTTGTAGGGGACACTGGGCCG------TGAGGCAAGGGTTGCTGGTCGTGTGG-CCGCC----AGGCCTTGGCCAGGTCTCACGGG--------------CCCTCCGTCGGACGTCCCCCCACTGCTGTGTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1857744 362 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56862720 346 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e nomLeu3.chr13 110025142 423 - 110113093 M a score=140695.000000 s hg38.chr20_KI270870v1_alt 111645 22 + 183433 GGGAGCAGGCATCTAAGGGG---------TT s panTro5.chr20 66437867 22 + 66533130 GGGAGCAGGCCTCTAAGGGG---------TT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113007 22 + 62195757 GGGAGCAGGCCTCTAAGGGG---------TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502260 22 - 578057 GGGAGCAGGCATCTAAGGGG---------TT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92751930 22 - 92844088 GGGAACAGGCATCTAAGGGG---------CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419926 22 + 96509753 GGGAACAGGCATCTAAGGGG---------TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890918 22 - 16982598 GGGAACAGGCATCTAAGGGG---------TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692863 22 - 3785965 GGGAACAGGCATCTAGGGGG---------TT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77458 22 - 179258 GGGAACAGGCATCTAAGGGG---------TT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563012 22 - 5823884 GGGAACAGGCATCTAAGGGG---------TT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45323 19 + 372756 GGGAGCAGGCATC------------TGTATT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282567 31 + 16356641 GGGAGCAGGCATCTGCAGGGTGTCTTGCATT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151763 31 + 1231380 GGGAGCAGACGTCTGCAGGGTGTCTAGCATT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681496 31 + 11732439 GGGAGCAGGCGTCCGCAGGGTTTCTAGCATT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1858106 21 - 2029793 GGGAGCAGGCATCCGAGGGT---------T- i proCoq1.NW_012150197v1 I 362 C 0 s otoGar3.GL873542 22845716 22 + 22939663 GGGAGTAGGCGTCCCAGGGC---------TT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793029 22 + 182113224 CGGTTTCTGTGTCTAAGGAG---------TT i mm10.chr2 C 0 C 0 s canFam3.chr24 47608247 20 + 47698779 CAGAGCAGGGGTGCGGAGGT----------- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56862720 346 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e nomLeu3.chr13 110025142 423 - 110113093 M a score=615949.000000 s hg38.chr20_KI270870v1_alt 111667 60 + 183433 TCCAGCTTCCTGTCCCCGAGCGG-CCTTGTCCGCTCCACGCACTTGG-GCTCACAGCCGTGT- s panTro5.chr20 66437889 60 + 66533130 TCCAGCTTCCTGTCCCCGAGCGG-CCTTGTCCGCTCCACGCACTTGG-GCTCACAGCCCTGT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113029 60 + 62195757 TCCAGCTTCCTGTCCCCGAGCGG-CCTTGTCCGCTCCACGCACTTGG-GCTCACAGCCCTGT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502282 60 - 578057 TCCAGCTTCCTGTCCCCGAGCGG-CCTTGTCCGCTCCACGCACTTGG-GCTCACAGCCCTGT- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92751952 52 - 92844088 TCCAGCTTCCTGCCCCGGAGTGG-CCTTGTCGGCTCCACGCACTT-G-GCTCACA-------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96419948 52 + 96509753 TCCAGCTTCCTGCCCCGGAGTGG-CCTTGTCGGCTCCACGCACTT-G-GCTCACA-------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890940 52 - 16982598 TCCAGCTTCCTGCCCCGGAGTGG-CCTTGTCGGCTCCACGCACTT-G-GCTCACA-------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692885 59 - 3785965 TCCAGCTTCCTGCCCCGGAGTGG-CCTTGTCGGCTCCACGCACTT-G-GCTCACAGCCCTGT- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77480 59 - 179258 TCCAGCTTCCTGCCCCGGAGTGG-CCTTGTCGGCTCCACGCACTT-G-GCTCACAGCCCTGT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563034 59 - 5823884 TCCAGCTTCCTGTTCCGGAGTGG-CCTTGTCGGCTCCACGCACTT-G-GCTCACAGCCCTGT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45342 60 + 372756 TCCAGCTTCCTGTCCCGGAGTGG-CCTTGTCAGCTCCATGCACTTGG-GCTCACAGCCCTGT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282598 60 + 16356641 TCCAGCTTCCTGTCCCAGAGTGG-CCTTGTGAGCTCCACGCACTTGG-GCTCACAGCCCTGT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151794 53 + 1231380 TCCAGCTTCCTGTCCCGGAGCGG-CCTTGTCAGCTCCA-------GG-GCTCACAGCCCTGT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681527 60 + 11732439 TCCAGCTTCCTGTCCCGGAGTGG-CCTCGTCAGCTCCACGCACTTGG-GCTCACAGCCCTGT- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56863066 59 + 57149010 TCCAGCTCCCTGCCCCAGGGTGG-CCTCGCCAGCTCCGTGCACTT-G-GCTCACGGCCCCGT- i micMur3.chr18 I 346 C 0 s proCoq1.NW_012150197v1 1858127 59 - 2029793 TCCAGCTTCCTGTCCCAGAGTGG-CCTTGTCAGCTCCGTGCACTT-G-GCCCACGGCCCTGT- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22845738 60 + 22939663 CCCAGCTTCCTGTCCCAGAGTGG-CCTTGTCAGCTCCACACACTT-GAGCTCATAGCCCTGT- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793051 56 + 182113224 -TCAG-TTTCTGTCC--AGACGG-CCTTGGCAACTTTATGTACTCAG-GCTCAGAGCTGGGT- i mm10.chr2 C 0 I 190 s canFam3.chr24 47608267 58 + 47698779 TCCGGCTTC---TCCCAGAGGGGCCCTCACCTGCTCCTCGCCCGTGG-GCTCCCAGCC-TGTC i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I e nomLeu3.chr13 110025142 423 - 110113093 M a score=30641.000000 s hg38.chr20_KI270870v1_alt 111727 5 + 183433 ---CTCAC s panTro5.chr20 66437949 5 + 66533130 ---CTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113089 5 + 62195757 ---CTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502342 5 - 578057 ---CTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s cerAty1.NW_012001373v1 3692944 5 - 3785965 ---CTCAC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77539 5 - 179258 ---CTCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563093 5 - 5823884 ---CTCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45402 5 + 372756 ---CTCAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282658 5 + 16356641 ---CTCAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151847 5 + 1231380 ---CTCAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681587 5 + 11732439 ---CTCAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56863125 5 + 57149010 ---CTCGC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1858186 5 - 2029793 ---CTCGC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22845798 5 + 22939663 ---CTTAC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47608325 5 + 47698779 CTGCT--- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181793107 190 + 182113224 I e dasNov3.JH569290 244554 892 - 397369 I e macNem1.NW_012014244v1 16890992 0 - 16982598 C e nomLeu3.chr13 110025142 423 - 110113093 M e rheMac8.chr10 92752004 0 - 92844088 C e macFas5.chr10 96420000 0 + 96509753 C a score=223939.000000 s hg38.chr20_KI270870v1_alt 111732 38 + 183433 ACCCTCTGAGGCTGGGGCCGGAAGGTGCAGGCCCACCT s panTro5.chr20 66437954 38 + 66533130 ACCCTCTGAGGCTGGGGCCGGAAGGTGCAGGCCCACCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113094 38 + 62195757 ACCCTCTGAGGCTGGGGCCGGAAGGTGCAGGCCCACCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502347 38 - 578057 ACCCTCTGAGGCTGGGGCCGGAAAGTGCAGGCCCACCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92752004 8 - 92844088 ------------------------------GCCCACCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420000 8 + 96509753 ------------------------------GCCCACCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16890992 8 - 16982598 ------------------------------GCCCACCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692949 37 - 3785965 AGCCTCTGA-GCTGGGGCAGGAAGGTGCGGGCCCACCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77544 37 - 179258 AGCCTCTGA-GCTGGGGCGGGAAGGTGCGGGCCCACCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563098 37 - 5823884 AGCCTCTGA-GCTGGGGCCGGAAGGTGCGGGCCCACCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45407 38 + 372756 GCCCTCTGAGACTGGGGCTGGAAGGTGCAGGACCACCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282663 38 + 16356641 GCTCTCTGAGTCTGGGGCTGGAAGGTGCAGGACCACCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151852 38 + 1231380 GCCCTCTGAGTCTGGGGCTGGAAGGTGCAGGACCACCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681592 38 + 11732439 GCCCTCTGAGTCTGGGGCTGGAAGGTGCAGGACCACCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56863130 38 + 57149010 ACCCTCTGCGGCTGGGGCTGGGAGGTGCCGGCCCACCT i micMur3.chr18 C 0 I 49 s proCoq1.NW_012150197v1 1858191 38 - 2029793 ACCCTCTGCGGCTGGGGCTGGGAGGTGCCGGCCCACCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22845803 38 + 22939663 ACTATCTGAGGCTGGGGTGGGAAATTGCCAGCCCACTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793297 38 + 182113224 acctcccgagtgctgggattaaaggcgtgcgccaccat i mm10.chr2 I 190 I 9 s canFam3.chr24 47608330 10 + 47698779 GCCCTCTGGG---------------------------- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I e nomLeu3.chr13 110025142 423 - 110113093 M a score=280459.000000 s hg38.chr20_KI270870v1_alt 111770 30 + 183433 TCCTGGGGACCAGGACTCTTCTGAGCTGAG s panTro5.chr20 66437992 30 + 66533130 TTCTGGGGACCAGGACTCTTCTGAGCTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113132 30 + 62195757 TTCTGGGGACCAGGACTCTTCTGAGCTGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502385 30 - 578057 TTCTGGGGACCAGGACTCTTCTGAGCTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92752012 30 - 92844088 TTCTGGGGACTGGGACTCTTCGGAGCTGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420008 30 + 96509753 TTCTGGGGACTGGGACTCTTCGGAGCTGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891000 29 - 16982598 TTCTGGGGACTGGGACTCTTCGG-GCTGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3692986 30 - 3785965 TTCTGGGGACCGGGACTCTTCGGAGCTGAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77581 30 - 179258 TTCTGGGGACCGGGACTCTTCGGAGCTGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563135 30 - 5823884 TTCTGGGGACCGGGACTCTTTGCAGCTGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45445 29 + 372756 TTCTGGGGACT-GGACTCTTCTGAGCTGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282701 29 + 16356641 TTCTGGGAACC-GGACTCTTCTGAGCTGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151890 29 + 1231380 TTCTGGGGACC-GGACTCTTCTGAGCTGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681630 29 + 11732439 TTCTGGGGACA-GGACTCTTCTGAGCTGAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1858229 30 - 2029793 GGCAGGGGACCAGGGCTCTTCTGAGCTGGG i proCoq1.NW_012150197v1 C 0 I 22 s otoGar3.GL873542 22845841 30 + 22939663 GGCAGGGGACCAGGAGTCTTCGGAACTGGG i otoGar3.GL873542 C 0 I 22 s mm10.chr2 181793344 22 + 182113224 TTCT--------GTACTTTTCTGAGTTGGG i mm10.chr2 I 9 I 20 s canFam3.chr24 47608340 28 + 47698779 --CTGGAGGCCAGAGCTCTTCTGAACTGGT i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56863168 49 + 57149010 I e dasNov3.JH569290 244554 892 - 397369 I e nomLeu3.chr13 110025142 423 - 110113093 M a score=228045.000000 s hg38.chr20_KI270870v1_alt 111800 32 + 183433 -----------------------GGTGACGTGTTC-AGGGCAGT-CCGGT-CCCCACA s panTro5.chr20 66438022 32 + 66533130 -----------------------GGTGACGTGTTC-AGGGCAGT-CCGGT-CCCCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113162 32 + 62195757 -----------------------GGTGACGTGTTC-AGGGCAGT-CCGGT-CCCCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502415 32 - 578057 -----------------------GGTGATGTGTTC-AGGGCAGT-CCGGT-CCCCACA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92752042 27 - 92844088 -----------------------GGTGATGTGTTC-GGGGCAGT-TCGGT-CC----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420038 27 + 96509753 -----------------------GGTGATGTGTTC-GGGGCAGT-TCGGT-CC----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891029 27 - 16982598 -----------------------GGTTATGTGTTC-GGGGCAGT-TTGGT-CC----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693016 27 - 3785965 -----------------------GGTGATGTGTTC-GGGGCAGT-TCGGT-CC----- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77611 27 - 179258 -----------------------GGTGATGTGTTC-GGGGCAGT-TCGGT-CC----- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563165 26 - 5823884 -----------------------GGTGA-GTGTTC-GGGGCAGT-TCGGT-CC----- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45474 31 + 372756 -----------------------GGTGA--TGTTC-AGAGCAGTGCCAGT-CTCCCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282730 33 + 16356641 -----------------------GGTGATGTGTTC-AGGGCAGTGCCAGT-CTCCCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151919 33 + 1231380 -----------------------GGTGATGTGTTC-AGGGCAGTGCCAGT-CTCCCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681659 33 + 11732439 -----------------------GGTGATGTGTTC-AGGGCAGTGCCAGT-CTCCCCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56863217 34 + 57149010 -----------------------GGTGACGTGTTCGAGGGTAGTGCCAGT-CCCCGCA i micMur3.chr18 I 49 C 0 s proCoq1.NW_012150197v1 1858281 34 - 2029793 -----------------------GGTGACGTGTTCGGGGGTAGTGCCAGT-CCCCACA i proCoq1.NW_012150197v1 I 22 C 0 s otoGar3.GL873542 22845893 34 + 22939663 -----------------------GGTGACATGTTTGGGGGCAGTGCCAGT-CCCCACA i otoGar3.GL873542 I 22 C 0 s mm10.chr2 181793386 31 + 182113224 -----------------------AATGACATG----GGGACAGTGCCAGTGTCCCACA i mm10.chr2 I 20 C 0 s canFam3.chr24 47608368 58 + 47698779 GGGTGGAGGTGTGGCTTGGGGCTGGTGACGTGTTCCGGGGCAGTGCCAGTGGCCTACA i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 244554 892 - 397369 I e nomLeu3.chr13 110025142 423 - 110113093 M a score=1629521.000000 s hg38.chr20_KI270870v1_alt 111832 121 + 183433 GGCCTCCACAGCAGCTGTCACCTAATTGCCTGATTCACTCAGTGATGTCATCGGCTAATTGGGACCTTAGCTTCAAATCCCCATTAACAAGGAGCTTTTTTGTGAAAAGTCCCAAAGCTAG s panTro5.chr20 66438054 120 + 66533130 GGCCTCCACAGCAGCTGTCACCTAATTGCCTGATTAACTCAGTGATGTCATCGGCTAATTGGGACCTTAGCTTCAAATCCCCATTAACAAGGAGCTTTTT-GTGAAAAGTCCCAAAGCTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113194 120 + 62195757 GGCCTCCACAGCAGCTGTCACCTAATTGCCTGATTAACTCAGTGATGTCATCGGCTAATTGGGACCTTAGCTTCAAATCCCCATTAACAAGGAGCTTTTT-GTGAAAAGTCCCAAAGCTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502447 120 - 578057 GGCCTCCACAGCAGCTGTCACCTAATTGTCTGATTAGCTCAGTGATGTCATCGGCTAATTGGGACCTTAGCTTCAAATCCCCATTAACGAGGAGCTTTTT-GTGAAAAGTCCCAAAGCTAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92752069 115 - 92844088 -----CCACAGAGGCTGTCACCTAATTACCTGATTAACTCAGTGATTTCATCGACTGACTGGGACCTTAGCTTCGAGTCCCCAGTAACAAGGAGCTTTTT-GTGAAAAGTCTCGAAGCTAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420065 115 + 96509753 -----CCACAGCGGCTGTCACCTAATTACCTGATTAACTCAGTGATTTCATCGACTGACTGGGACCTTAGCTTCGAGTCCCCAGTAACAAGGAGCTTTTT-GTGAAAAGTCTCGAAGCTAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891056 115 - 16982598 -----CCACAGCGGCTGTCACCTAATTACCTGATTAACTCAGTGGTTTCATCGACTGACTGGGACCTTAGCTTCGAGTCCCCAGTAACAAGGAGCTTTTT-GTGAAAAGTCTCGAAGCTAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693043 115 - 3785965 -----CCACAGCGGCTGTCACCTAATTACCTGATTAACTCAGTGATTTCATTGACTGACTGGGACCTTAGCTTCGAGTCCCCAGTAACAAGGAGCTTTTT-GTGAAAAGTCTCGAAGCTAG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77638 115 - 179258 -----CCACAGCGGCTGTCACCTAATTACCTGATTAACTCAGTGATTTCATCGACTGACTGGGACCTTAGCTTCGAGTCCCCAGTAACAAGGAGCTTTTT-GTGAAAAGTCTCGAAGCTAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563191 112 - 5823884 -----CCACAGCGGCTGTCACCTAATTACCTGATTAACTCAGTGATTTCATCGACTGACTGGGACCTTAGCTTCGAGTCCCCAGTAACAAGGAGCTTTTT-GTGAAAAGTCTCGAAGC--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45505 120 + 372756 GGCCTCAATGGCAGCTGTCACCTAATTTCCTGATTAACTCAGTGATTTAATCGACTAATTGGGACCTCAGCTTCAAATCCCCAATAACAAGGAGGTTTTT-GTGAAAAGCTTCAAAGCTAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282763 120 + 16356641 GGCCTCAATGGCAGCTGCCACCTAATTTCCTGATTAACTCAGTGGTTTAATCGACTAATTGGGACCTTAGCTTCAAATCCCCAGTAACAAGGAGCTTTTT-GTGAAAAGCCTCAAAGCTAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1151952 119 + 1231380 GGCCTCAAT-CCAGCTGTCACCTAATTTCCTGATTAACTCAGTGATTTAATCGACTCATAGGGACCTTAGCTTCAAATCCGCAATAACAAGGAGCTTTTT-GTGAAAAGCTTCAAAGCTAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681692 120 + 11732439 GGCCTCAATGGCAGCTGTCACCTAATTTCCTGAGCAACTCAGTGATTTAATCGACTAATTGGGACCTTAGCTTCAAATCCCCAATAACGAGGAGATTTTT-GTGAAAAGCCTCAAAGCTAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56863251 119 + 57149010 GGCCTCCATGGCAGCTGTCACCTAATTGCCTGATTAACTCAGTGAT-TAATCGACTAATTGGGACCTCAGCTTCAAATCCCCAATAACAAGGAGCTTTTT-GTGAAAAGTCTCAAAGCTAG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1858315 119 - 2029793 GGCCTCCATGGCAGCTGTCACCTAATTGCCTGATTAACTCAGTGAT-TAATCGACTAATTGGGACCTCAGCTTCAAATCCCCAATAACAAGGAGCTTTTT-GTGAAAAGTCTCAAAGCTAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22845927 119 + 22939663 GGCCTCCATGGCAGCTGTCACCTAATTGCCTGATTAACTCAGTGAT-TAATCGACTAATTGGGACCTCAGCTTTAAAACCCCAATAACAACGAGCTTTTT-GTGAAAAGTCTCAAAGCTAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793417 114 + 182113224 GGCCTCCACAGCAGCTGTTGCCTAATTGCCTGATTA----AGTGAT-TAGTTGACTAACTGGGACCTCAGCTTCAAATCC-CAGTAACAACGAACTGTTT-GTAAAAAGTCTCAAAGCTAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47608426 118 + 47698779 GGACTCCACAGCAGCTGTCACATAATTGCCTGATTAACTCAGTGAT-TAATCGGCTAATTGGGACCTCGGCTTCAAATCCCCAGTAACAAGGA-CCTTTT-GTGAAAAGTCTCAAAGCTAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 245446 117 - 397369 GGCCACCCTGGAGGCTGCCACCTAATTGCCTGATTAACTCAGGGAT-TCATCGACTAATTGGGGCCTCGGCTCCAG--TCCCAATGACAAGGAGCTTTTT-GTGAAAAGTCTCAAAACTGG i dasNov3.JH569290 I 892 I 214 e chlSab2.chr2 90273961 2150 - 90373283 I e nomLeu3.chr13 110025142 423 - 110113093 M a score=113115.000000 s hg38.chr20_KI270870v1_alt 111953 11 + 183433 TTCTCCAAAGA s panTro5.chr20 66438174 11 + 66533130 TTCTCCAAAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113314 11 + 62195757 TTCTCCAAAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502567 11 - 578057 TTCTCCAAAGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92752184 11 - 92844088 TTCTCCGAAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420180 11 + 96509753 TTCTCCGAAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891171 11 - 16982598 TTCTCCGAAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693158 11 - 3785965 TTCTCCGAAGA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77753 11 - 179258 TTCTCCGAAGA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 45625 11 + 372756 TTCTTGAAAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282883 11 + 16356641 TTCTCGAAAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152071 11 + 1231380 TTCTCGAAAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681812 11 + 11732439 TTCTCGAAAGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56863370 11 + 57149010 TTCTTGAGAGA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1858434 11 - 2029793 TTCTTGAGAGA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22846046 11 + 22939663 TTCTTGAGAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793531 11 + 182113224 TTCTTGAGAGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47608544 11 + 47698779 CTCTTGAGAGA i canFam3.chr24 C 0 C 0 e colAng1.NW_012114444v1 5563303 0 - 5823884 C e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 245563 214 - 397369 I e nomLeu3.chr13 110025142 423 - 110113093 M a score=562687.000000 s hg38.chr20_KI270870v1_alt 111964 37 + 183433 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT s panTro5.chr20 66438185 37 + 66533130 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113325 37 + 62195757 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502578 37 - 578057 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025567 37 - 110113093 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i nomLeu3.chr13 M 423 C 0 s rheMac8.chr10 92752195 37 - 92844088 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420191 37 + 96509753 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891182 37 - 16982598 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693169 37 - 3785965 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77764 37 - 179258 GTGAAAGCAAGTGTGGGTCTG-GATTTTAGAAGAGACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563303 37 - 5823884 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45636 37 + 372756 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282894 37 + 16356641 GGGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152082 37 + 1231380 GTGAAAGCAAGTGTGGGCCTG-GATTTTAGAAGAGACG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681823 37 + 11732439 GTGAAAGCAAGTGTGGGCCTG-GATTTTCGAAGAGACT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56863381 37 + 57149010 GTGAAAGCAAGTGTGGGCCTG-GAATTTAGAATAGACT i micMur3.chr18 C 0 I 821 s proCoq1.NW_012150197v1 1858445 37 - 2029793 GTGAAAGCAAGTGTGGGCCTT-GAATTTAGAATAGACT i proCoq1.NW_012150197v1 C 0 I 317 s otoGar3.GL873542 22846057 37 + 22939663 GTGAAAGCAAGTGTGGGCCTG-GAATTTAGAATAGACT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793542 37 + 182113224 GTGAAAGCAAATTTGAGTACA-GATTTTACAATAGGCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47608555 37 + 47698779 GAGAAAGCAAGCGTGGGGCAGAGATTTCAGAATAGAC- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e dasNov3.JH569290 245563 214 - 397369 I a score=714580.000000 s hg38.chr20_KI270870v1_alt 112001 109 + 183433 AGAGGCAGGGAGAGGTGGGTGGCAGCGGCGGCAACT-CCC-TCAGTTTGGAAAGGGAGCCCCCAGTCGAGTGTGGTGTGCCctccctctc--------------------------------------tcgctctctccctcttcctcc s panTro5.chr20 66438222 108 + 66533130 AGAGGCAGGGAGAGGTGGGTGGCAGCGGCGGCAACT-CCC-TCAGTTTGGAAAGGGAGCCCCCAGTCAAGTGTGGTGTGCCctccctctc--------------------------------------tcgctctgtccctcttc-tcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113362 108 + 62195757 AGAGGCAGGGAGAGGTGGGTGGCAGCGGCGGCAACT-CCC-TCAGTTTGGAAAGGGAGCCCCCAGTCAAGTGTGGTGTGCCctccctctc--------------------------------------tcgctctctccctcttc-tcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502615 109 - 578057 AGAGGCAGGGAGAGGTGGGTGGCAGCGGCGGCAACT-CCC-TCAGTTTGGAAAGGGAGCCCCCAGTCAAGGGTGGTGTGccctccctctc--------------------------------------tcgctctctccctcttcctcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025604 102 - 110113093 AGAGGCAGGGAGAGGTGGGTGGCAGCAGCGGTAACTCCCC-TCAGTTTGGAAAGGGAACCCCCAGTCAAGTGTGGTGTGccctccctctc----------------------------------------------tccctcttcctcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752232 100 - 92844088 AGAGGCAGGGAGAGGTGGGTGGCAGCAGCAGCAACT-CCC-TCAGTTTGGAAAGGGAACCCGCAGT-AAGTGTGGCGTGccctccctctc----------------------------------------------tccctcttcctcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420228 100 + 96509753 AGAGGCAGGGAGAGGTGGGTGGCAGCAGCAGCAACT-CCC-TCAGTTTGGAAAGGGAACCCGCAGT-AAGTGTGGCGTGccctccctctc----------------------------------------------tccctcttcctcc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891219 100 - 16982598 AGAGGCAGGGAGAGGTGGGTGGCAGCAGCAGCAACT-CCC-TCAGTTTGGAAAGGGAACCCGCAGT-AAGTGTGGCGTGccctccctctc----------------------------------------------tccctcttcctcc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693206 100 - 3785965 AGAGGCAGGGAGAGGTGGGTGGCAGCAGCAGCAACT-CCC-TCAGTTTGGAAAGGGAACCCGCAGT-AAGTGTGGCGTGccctccctctc----------------------------------------------tccctcttcctcc i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77801 100 - 179258 AGGGGCAGGGAGAGGTGGGTGGCAGCAGCAGCAACT-CCC-TCAGTTTGGAAAGGGAACCCGCAGT-AAGTGTGGCGTGccctccctctc----------------------------------------------tcccccttcctcc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563340 146 - 5823884 AGAGGCAGGGAGAGGTGGGTGGCAGCAGCAGCAACT-CCC-TCAGTTTGGAAAGGGAACCCACAGT-AAGTGTGGCGTGCCCTCCCTCCCTCTTCCCCTCCTTTCCCGGCAGTACATGTGGTGCGccctccctccttcccccttcctcc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45673 100 + 372756 GGAGGCGGGGAGA-AGGGGTGGCAGCAGGAGCAGCT-CCC-TCAGTTTGGAAAGGGAATCTGCGGTAGAGTGTGGCATGccctccctctc----------------------------------------------tccctcttcctcc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16282931 95 + 16356641 GGAGGCGGGGAG---GGGGCGGCGGCAGCAGCAGCT-CCC-TCAGTTTGGAAAGGGGACCTGCAGCGGAGAGTGGCCTGccctcc--ctc----------------------------------------------tccctcttcct-c i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152119 95 + 1231380 GGAGGCGGGGAG---GAGGTGGCAGCAGCAGCAGCT-CCC-TCAGTTCCGAAAGGGAATCTGCAGTAGAGTGTGGCCGGccctcc--ctc----------------------------------------------tccctcgtcct-c i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2681860 84 + 11732439 GGAGGCGGGGAG--CGGGGTGGCAG-----------------CAGTTTGGAAAGGGAATCTGCAGTAGAGGATGGCACGccctccctctc----------------------------------------------tccctcttcctcc i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22846094 87 + 22939663 ---AGCTGGGGGGTGGGGGTGG--GCAGTGGCCACTGCCC-TCCATTTGGAA--GGAAATCGCAGTAAAATGTGGCAGGCCCTCCCTATG----------------------------------------------TCCCT-------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793579 69 + 182113224 --------------GTCCGTGGT--TAGAAATAATT---C-TCCATCTGAAAAAGAAATCTG--ATAAAATA------------CCTTTC----------------------------------------------TGCTTTTTCCTCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47608592 84 + 47698779 --AGGCCGGGGG-------------CAGCGGTAAGT-CCTGTTTGTCTGGAAAGGAAACCCACAATAAAATG-GGCACGTcttccctccc--------------------------------------------gctcctccgtc---- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1858482 317 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=574200.000000 s hg38.chr20_KI270870v1_alt 112110 73 + 183433 ctcttcccctcccttcccgtctgggttccct--------------------------------------cttccctcctccctccctccttccctccctctctgtcttctT s panTro5.chr20 66438330 73 + 66533130 ctcttcccctcctttcccgtctgggttcctt--------------------------------------cttccctcctccctccctccttccctccctctctgtcttctc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113470 73 + 62195757 ctcttcccctcctttcccgtctgggttcctt--------------------------------------cttccctcctccctccctccttccctccctctctgtcttctc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502724 73 - 578057 ctcttcccctcctttcccgtctgggttcctt--------------------------------------cttccctcctccctccctccttccctccctctctGTCTTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025706 73 - 110113093 ctcttcccctcctttcctgcctgggttcctt--------------------------------------cttccctcctccttccctccttccctccctTTCTGTCTTCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752332 73 - 92844088 ctcttcccctcctttcccgcctgggttcctt--------------------------------------cttccctcctccctccttccttccctccctTTCTGTCTTCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420328 73 + 96509753 ctcttcccctcctttcccgcctgggttcctt--------------------------------------cttccctcctccctccttccttccctccctTTCTGTCTTCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891319 73 - 16982598 ctcttcccctcctttcccgcctgggttcctt--------------------------------------cttccctcctccctccttccttccctccctTTCTGTCTTCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693306 73 - 3785965 ctcttccccttctttcccgcctgggttcctt--------------------------------------cttccctcctccctccttccttccctcccttcctGTCTTCTT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77901 73 - 179258 ctcttcccctcctttcccgcctgggttcctt--------------------------------------cttccctcctccctccttccttccctccctTTCTGTCTTCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563486 111 - 5823884 ctcttcccctcctttcctgcctgggttcctttttccctcctccctccttccttccctcctccctccttccttccctcctccctccttccttccctccctTTCTGTCTTCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45773 73 + 372756 ctcctcccctccttttctgcttgggttcctt--------------------------------------cttacctcctccctccttccttccctTCTTTTCTGTCTTCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283026 73 + 16356641 cttctcccctccttttctgcttgggttcctt--------------------------------------cctacctcctccctccttccttcccttcctttctgtcttctt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152214 38 + 1231380 -------------------------------------------------------------------------cctcctccctccttcctgcccttcctttctgtcttcTT i cebCap1.NW_016107870v1 C 0 I 25 s aotNan1.NW_018500483v1 2681944 73 + 11732439 ctcctcccctccttttctgcttgggttcctt--------------------------------------cttacctcctccctccttccttcccttcctttctgtcttctt i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22846181 24 + 22939663 ------------------------------T--------------------------------------CTCCCCTCCT-------------------TTTCTTTCTCCTT i otoGar3.GL873542 C 0 I 17 s canFam3.chr24 47608676 44 + 47698779 ----------------------------ctc--------------------------------------tctccctcct-cgtcctttcctctcttcctcTTAAACACGTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1858482 317 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181793648 0 + 182113224 C e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=98069.000000 s hg38.chr20_KI270870v1_alt 112183 14 + 183433 GTTAAC----ACACTGAA s panTro5.chr20 66438403 14 + 66533130 GTTAAC----ACACTGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113543 14 + 62195757 GTTAAC----ACACTGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502797 14 - 578057 GTTAAC----ACACTGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025779 14 - 110113093 GTTAAC----ACACTGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752405 14 - 92844088 TTTAAC----ACACTGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420401 14 + 96509753 TTTAAC----ACACTGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891392 14 - 16982598 TTTAAC----ACACTGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693379 14 - 3785965 TTTAAC----ACACGGAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77974 14 - 179258 TTTAAC----ACACTGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563597 14 - 5823884 TTTAAC----ACACTGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45846 14 + 372756 TTTAAC----ACTCTAAG i calJac3.chrUn_GL286459 C 0 I 14 s saiBol1.JH378156 16283099 14 + 16356641 TTTAAC----ACTCTAAG i saiBol1.JH378156 C 0 I 14 s aotNan1.NW_018500483v1 2682017 14 + 11732439 tTTAAC----ACTCTAAG i aotNan1.NW_018500483v1 C 0 I 14 s otoGar3.GL873542 22846222 14 + 22939663 CTTTGC----ACGTTGAA i otoGar3.GL873542 I 17 I 25 s canFam3.chr24 47608720 15 + 47698779 ---GACACCAACCCTGAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1858482 317 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181793648 0 + 182113224 C e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e cebCap1.NW_016107870v1 1152252 25 + 1231380 I a score=790700.000000 s hg38.chr20_KI270870v1_alt 112197 117 + 183433 -----------AACCCCACCCTGGAAGGCTGCA--GAGAACATCCCC-----------CTCCCCCACCCCATG---GCTGCTGTTGAGCCAGGGGATAGGGTAAGGCCTGGATTCTGCTGAC------G------GTTCTCCCAGAGGTAGTCGGG s panTro5.chr20 66438417 123 + 66533130 -----------AACCCCACCCTGGAAGGCTGCA--GAGAACATCCCC-----------CTCCCCCACCCCATG---GCTGCTGTTGAGCCAGGGGATAGGGTAAGGCCTGGATTCTGCTGAC------GCTGACGGTTCTCCCAGAGGTAGTCGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113557 123 + 62195757 -----------AACCCCACCCTGGAAGGCTGCA--GAGAACATCCCC-----------CTCCCCCACCCCATG---GCTGCTGTTGAGCCAGGGGATAGGGTAAGGCCTGGATTCTGCTGAC------GCTGACGGTTCTCCCAGAGGTAGTCGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502811 117 - 578057 -----------AACCCCACCCTGGAAGGCTGCA--GAGAACATCCCC-----------CTCCCCCACCCCACG---GCTGCTGTTGAGCCAGGGGATAGGGTAAGGCCTGGATTCTGCGGAC------G------GTTCTCCCTGAGGTGGTCGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025793 128 - 110113093 -----------AACCCCAGCCTGGAAGGCTGCA--GAGGACGTCCGTCTGCATGAGAGCTCCCCCACCCCATG---GCTGCTGTTGATCCAGGGGATAGGGTAAGGCCTGGATTCTGCTGAC------G------GTTCTCCCTGAGGTTGTCGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752419 123 - 92844088 -----------AGCACCACCCTGGAAGGCTGCG--GAGAACGTCCCA-----TGAGCACTCCCCCACCCCATG---GCTGCTGTTGAGTTGGGTGATAGGGTGAGGTCTGGATTCTACTGAC------A------GTTCTCCCTGAGGTGGTCGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420415 123 + 96509753 -----------AGCACCACCCTGGAAGGCTGCA--GAGAACGTCCCA-----TGAGCACTCCCCCACCCCATG---GCTGCTGTTGAGTTGGGTGATAGGGTGAGGTCTGGATTCTACTGAC------A------GTTCTCCCTGAGGTGGTCGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891406 123 - 16982598 -----------AGCACCACCCTGGAAGGCTGCA--GAGAACGTCCCA-----TGAGCACTCCCCCACCCCATG---GCTGCTGTTGAGTTGGGTGATAGGGTGAGGTCTGGATTCTACTGAC------A------GTTCTCCCTGAGGTGGTCGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693393 123 - 3785965 -----------AGCACCACCCTGGAAGGCTGCA--GAGAACGTCCCA-----TGAGCACTCCCCCACCTCACG---GCTGCTGTTGAGTTGGGTGATAGGGTGAGGTCTGGATTCTACTGAC------A------GTTCTCCCTGAGGTGGTCGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 77988 123 - 179258 -----------AGCACCACCCTGGAAGGCTGCA--GAGAACGTCCCA-----TGAGCACTCCCCCACCTCACG---GCTGCTGTTGAGTTGGGTGATAGGGTGAGGTCTGGATTCTACTGAC------A------GTTCTCCCTGAGGTGGTCGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563611 123 - 5823884 -----------AGCACCACCCTGGAAGGCTGCA--GAGAACGTCCCA-----TGAGCACTCCCCCACCCCATG---GCTGCTGTTGAGCTGGGTGATAGGGTGAAGTCTGGATTCTACTGAC------G------GTTCTCCCTGAGGTGGTCGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45874 122 + 372756 -----------AGCCCCGCCCTGGAAGGCTGCA--GGGAAGGTCCAC----CTTAGAGCTCCCACACC-CGTG---GTTGCTGTTGAGCCTAGGGATGGGGTGAGG-CTGGATTCTCCTGAC------A------GTTCTCCCTGAGGTGGTTGGG i calJac3.chrUn_GL286459 I 14 C 0 s saiBol1.JH378156 16283127 83 + 16356641 -----------AGCCCCGCCCTGGAAGGC-------------------------------------------------TGCTGTTGAGCCTGGGGTTGTGGCGGGG-CCGGAATCTCCTGAC------A------GTTCTCCCTGGGGTGGTCAGG i saiBol1.JH378156 I 14 C 0 s cebCap1.NW_016107870v1 1152277 108 + 1231380 -----------AGCCCCGCCCTGGAAGGCTGCA--GGGAATGT------------------CCGCACC-TCTG---GCTGCTGTTGAGCCTGGGGATGGGGTGAGG-CCGGATTCTCCTGAC------T------GTTCTTCCTGAGGTGGTCGGG i cebCap1.NW_016107870v1 I 25 I 21 s aotNan1.NW_018500483v1 2682045 122 + 11732439 -----------AGCCCCGCCCTGGAAGGCTGCA--GGGAACGTCCGC----CTTAGAGCTCCCGCACC-CATG---GCTGCTGTTGAGCCTGGGGATGGGGCGAGG-CCGGATGCTCCTCAC------A------GTTCTCCCTGAGGTGGTCGGG i aotNan1.NW_018500483v1 I 14 C 0 s otoGar3.GL873542 22846261 97 + 22939663 -----------GGCTCCACCATGGACATTTG-A--GGGGTTGTCCTC----ATCAGAGCCTTCACCCCCCATG---GCTGGCGTTAAGCTTGGAGTTGGGG--GGGCATGG-----GCCATC------A------GT------------------- i otoGar3.GL873542 I 25 C 0 s canFam3.chr24 47608735 136 + 47698779 ATCGGCCTCGGTGGCCCAGCTGGGAGGGCTCCACGGAGGCCGCCGCT-----------CCCCCGCAAGCCCCGCAAGCCGCCGTTGAGCTCGGGGT--GGGTGGGGCTCTGCGTCCACAGACTACCCTG------CTTCTCCCTGACGCGTCCGT- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1858482 317 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181793648 0 + 182113224 C e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=169806.000000 s hg38.chr20_KI270870v1_alt 112314 21 + 183433 GAGGGTGGCCTGCAAGCCCAC- s panTro5.chr20 66438540 21 + 66533130 GAGGGTGGCCTGCAAGCCCAC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113680 21 + 62195757 GAGGGTGGCCTGCAAGCCCAC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502928 21 - 578057 GAGGGTGGCCTGCAAGCCCAC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025921 21 - 110113093 GAGGGTGGCCTGCAAGCCCAT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752542 21 - 92844088 GAGGGTGGCCTGCAAGGCCAT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420538 21 + 96509753 GAGGGTGGCCTGCAAGGCCAT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891529 21 - 16982598 GAGGGTGGCCTTCAAGGCCAT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693516 21 - 3785965 GAGGGTAGCCTGCAAGGCCAT- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 78111 21 - 179258 GAGGGTAGCCTGCAAGGCCAT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563734 21 - 5823884 GAGGGTGGCCTGCAAAGCCAT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 45996 21 + 372756 GAGTGTGGCCTGTAAGGCCAG- i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16283210 21 + 16356641 GAGTGCGGCCTTCAAGGCCAG- i saiBol1.JH378156 C 0 I 1 s aotNan1.NW_018500483v1 2682167 21 + 11732439 GAGTGTGGCCTGCAAGGCCAG- i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22846358 21 + 22939663 GAGTGTGGACTGCATGGCCAG- i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47608871 22 + 47698779 GGGTGTGACCTGCGGGGCCAGA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1858482 317 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181793648 0 + 182113224 C e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e cebCap1.NW_016107870v1 1152385 21 + 1231380 I a score=206694.000000 s hg38.chr20_KI270870v1_alt 112335 19 + 183433 TGGGCCCCACAGTTGTCTG s panTro5.chr20 66438561 19 + 66533130 TGGGCCCCACAGTTGTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113701 19 + 62195757 TGGGCCCCACAGTTGTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502949 19 - 578057 TGGGCCCCACAGTTGTCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025942 19 - 110113093 TGGGCCCCACAGTTGTCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752563 19 - 92844088 TGGGCCCCACAGTTGTCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420559 19 + 96509753 TGGGCCCCACAGTTGTCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891550 19 - 16982598 TGGGCCCCACAGTTGTCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693537 19 - 3785965 TGGGCCCCACAGTTGTCTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 78132 19 - 179258 TGGGCCCCACAGTTGTCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563755 19 - 5823884 TGGGCCCCACAGTTGTCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46018 19 + 372756 TGGGCGCCACAGTTGTCTG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16283232 19 + 16356641 TGGGCCCCACAGTTGTCTG i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1152406 19 + 1231380 TGGGCCCCACAGTTGTCTG i cebCap1.NW_016107870v1 I 21 C 0 s aotNan1.NW_018500483v1 2682189 18 + 11732439 TGGGC-CCACAGTTGTCTG i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22846380 19 + 22939663 TGGGTCCTACAGCTGTTTT i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47608893 19 + 47698779 TGAGCCCCTCAGTGCATTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1858482 317 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181793648 0 + 182113224 C e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=317272.000000 s hg38.chr20_KI270870v1_alt 112354 25 + 183433 CAGTCAGGCCTGTGATCAGTCGAAT s panTro5.chr20 66438580 25 + 66533130 CAGTCAGGCCTGTGATCAGTCGAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113720 25 + 62195757 CAGTCAGGCCTGTGATCAGTCGAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502968 25 - 578057 CAGTCAGGCCTGTGGTCAGTCGAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025961 25 - 110113093 CAGTCAGGCCTGTGGTCAGTTGAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752582 25 - 92844088 CAGTCAGGCCTGTGGTCAGTCGAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420578 25 + 96509753 CAGTCAGGCCTGTGGTCAGTCGAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891569 25 - 16982598 CAGTCAGGCCTGTGGTCAGTCGAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693556 25 - 3785965 CAGTCAGGCCTGTGGTCAGTCGAAT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 78151 25 - 179258 CAGTCAGGCCTGTGGTCAGTCGAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563774 25 - 5823884 CAGTCAGGCCTGTGGTCAGTCGAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46037 25 + 372756 CAGTCAGGCCTGTGGTCAATCAAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283251 25 + 16356641 CAGTCAGGCCTGTGGTCAATCAAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152425 25 + 1231380 CAGTCAGGCCTGTGGTCAATCAAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682207 25 + 11732439 CAGTCAGGCCCGTGGTCAGTCAAAT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1858799 25 - 2029793 CAGTCAGGCCTGCGGTCAGTCAAAT i proCoq1.NW_012150197v1 I 317 C 0 s otoGar3.GL873542 22846399 25 + 22939663 TAGTCAGACCTGTGGTCAACCAAGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47608912 25 + 47698779 CAGTCAGGCCCGTGATCAATCAACT i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e mm10.chr2 181793648 0 + 182113224 C e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=353986.000000 s hg38.chr20_KI270870v1_alt 112379 32 + 183433 TAGAAACGATCAGAGGTGTCTGGATAGAGACT s panTro5.chr20 66438605 32 + 66533130 TAGAAACGATCAGAGGTGTCTGGATAGAGACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113745 32 + 62195757 TAGAAACGATCAGAGGTGTCTGGATAGAGACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 502993 32 - 578057 TAGAAACGATCAGAGGTGTCTGGATAGAGACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110025986 32 - 110113093 TAGAAACGATCAGAGGTGTCTGGATAGAAACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752607 32 - 92844088 TAGAAACGATCAGCGGTGTCTATATAGAGGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420603 32 + 96509753 TAGAAACGATCAGCGGTGTCTATATAGAGGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891594 32 - 16982598 TAGAAACGATCAGAGGTGTCTATATAGACGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693581 32 - 3785965 TAGAAACGATCAGAGGTGTCTGGATAGAGGCT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 78176 32 - 179258 TAGAAATGATCAGAGGTGTCTGGATAGAGGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563799 32 - 5823884 TAGAAACGATCAGAGGTGTCTGGATAGAGGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46062 32 + 372756 TAGAAAGGATCAGAGGTGTCTAAACAGAGGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283276 32 + 16356641 CGGAAACGATCAGAGGTGTCTGAATAGAGGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152450 32 + 1231380 TGGAAACGATCAGAGGTGTCTGAATAGAGGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682232 32 + 11732439 CAGAAATGATCAGAGGTGTCTGAATAGAGGTT i aotNan1.NW_018500483v1 C 0 I 32 s proCoq1.NW_012150197v1 1858824 31 - 2029793 AAGAAACCGTCAGA-GGGTCTGGACAGAGGCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22846424 32 + 22939663 AAGAAACCATTGGAGGGGTCTTGACAGAGGCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793648 31 + 182113224 TGGAAACTGTCAGGGGTATCCGAACAAAGGT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47608937 32 + 47698779 TAGAGACCATCCGGCGTGTCTAGACAGAGGTC i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=321425.000000 s hg38.chr20_KI270870v1_alt 112411 35 + 183433 GGGGATGGCGTTCTTTTCCCCGGGTCCCAGGTATG s panTro5.chr20 66438637 35 + 66533130 GGGGATGGCGTTCTTTTCCCCGGGTCCCAGGTATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113777 35 + 62195757 GGGGATGGCGTTCTTTTCCCCGGGTCCCAGGTATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503025 35 - 578057 GGGGATGGCGTTCTTTTCCCCGGGTCCCAGGTATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026018 35 - 110113093 GGGGATGGCGTTCTTTTCCCTGGGTCCCAGGTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752639 35 - 92844088 GGGGATGGTGTTCTTTTCTCTGGGTCCCAGGTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420635 35 + 96509753 GGGGATGGTGTTCTTTTCTCTGGGTCCCAGGTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891626 35 - 16982598 GGGGATGGTGTTCTTTTCTCTGGGTCCCAGGTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693613 35 - 3785965 GGGGATGGTGTTCTTTTCTCTGGGTCCCAGGTGTG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 78208 35 - 179258 GGGGATGGTGTTCTTTTCTCTGGGTCCCAGGTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563831 35 - 5823884 GGGGATGGTGTTCTTTTCCCTGGGTCCCAGGTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46094 34 + 372756 -GGGATGGTGTTCTTTTCCCTGGGTCTCAGGTGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283308 34 + 16356641 -GGGATGGTGTTCTTTTCCCTGGGTCTCAGGTGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152482 34 + 1231380 -GGGATGGCGTTCTTTTCCCTGGGTCTCAGGTGTG i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1858855 35 - 2029793 GGAGGTGGGGCCTGTTTCCCTGGGTCCCAGGTACT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22846456 35 + 22939663 AGAGGTGGTGCCCATGTCCCTGGGTGCCCAGCATC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793679 26 + 182113224 -GGAGTGG----CCCTTTCTTAGGTCCCAAA---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47608969 26 + 47698779 GGGGGCCATGCCCTTT---CTGGGGCCTA------ i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e aotNan1.NW_018500483v1 2682264 32 + 11732439 I a score=685719.000000 s hg38.chr20_KI270870v1_alt 112446 62 + 183433 GGGGCACCAGCCCTTACCTTCCTCCCTTCACAGGCTCCG-GAAGATGTGCTTGGGTTTTGGAA s panTro5.chr20 66438672 62 + 66533130 GGGGCACCAGCCCTTACCTTCCTCCCTTCACAGGCTCCG-GAAGATGTGCTTGGGTTTTGGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113812 62 + 62195757 GGGGCACCAGCCCTTACCTTCCTCCCTTCACAGGCTCCG-GAAGATGTGCTTGGGTTTTGGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503060 62 - 578057 GGGGCACCAGCCCTTACCTTCCTCCCTTCACAGGCTCCG-GAAGATGTGCTTGGGTTTTGGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026053 62 - 110113093 GGGGCGCCAGCCCTTACCTTCCTCTCTTCACAGGCTCCG-GAAGATGTGCTTGGGTTTTGGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752674 62 - 92844088 GGGGTGTCAGCCCTTTCCTTCCTCCCTTCACAGGCTCTG-GAAGATGTGCTTGCGTTTTGGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420670 62 + 96509753 GGGGTGTCAGCCCTTTCCTTCCTCCCTTCACAGGCTCTG-GAAGATGTGCTTGCGTTTTGGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891661 62 - 16982598 GGGGTGTCAGCCCTTTCCTTCCTCCCTTCACAGGCTCTG-GAAGATGTGCTTGCGTTTTGGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693648 62 - 3785965 GGGGTGTCAGCCCTTTCCTTCCTCCCTTCACAGGCTCTG-GAAGATGTGCTTGGGTTTTGGAA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 78243 62 - 179258 GGGGTGTCAGCCCTTTCCTTCCTCCCTTCACAGGCTCTG-GAAGATGTGCTTGGGTTTTGGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563866 62 - 5823884 GGGGTGCCAGCCCTTTCCTTCCTCCCTTCACAGGCTCTG-GAAGATGTGCTTGGGTTTTGGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46128 62 + 372756 GGGGTGCCAGCCCTTCCCTTCCTCCTTTCGCAGGCTCTG-GAAGATGTGCTTGTGTTTCGGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283342 61 + 16356641 GGGGTGCCAGTCCTTCCCTTCCTCCCTT-ACAGGCTCTG-GAAGATGTGCTGGTGTTCTGGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152516 62 + 1231380 GGGGTGCCAGTCCTTTCCTTCCTGCCTTCACAGGCTCTG-GAAGATGTGCTTGTGTTTTGGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682296 62 + 11732439 GGGGTGCCAGCCCTTCCCTTCCTCCCTTCACAGGCTCTG-GAGGGTGTGCTTGTGTTTTGGAA i aotNan1.NW_018500483v1 I 32 C 0 s proCoq1.NW_012150197v1 1858890 62 - 2029793 GGTGGGCCAGCCCAGACCTTCCTCCCTTCATAGGCTCTG-GAAGATGTGCCCGTGTTTTGGAA i proCoq1.NW_012150197v1 C 0 I 38 s otoGar3.GL873542 22846491 62 + 22939663 AGTGGGCCAGCTCATACCTTCCTCCCTTCCCAGGCTCTG-AAAGATGTACCTGTGTTTTAGGA i otoGar3.GL873542 C 0 I 17 s mm10.chr2 181793705 60 + 182113224 ---GAGCTGCTCCCTACCTGCCTCCCTTTGCAGATTTTGAGAAGCTGTGCCAAATTTTAGGAG i mm10.chr2 C 0 I 7 s canFam3.chr24 47608995 46 + 47698779 --------------CCCTGTTCTTCCCTCACAGGATCTG-GGAACACCCCAGCTGAAGTGG-- i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=233386.000000 s hg38.chr20_KI270870v1_alt 112508 24 + 183433 AGAGCTCAGACTC-AC---AATGCCAGT s panTro5.chr20 66438734 24 + 66533130 AGAGCTCAGACTC-AC---AATGCCAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113874 24 + 62195757 AGAGCTCAGACTC-AC---AATGCCAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503122 24 - 578057 AGAGCTCAGACTC-AC---AATGCCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026115 27 - 110113093 AGAGCTGAGACTC-ACCGTAATGCCAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752736 24 - 92844088 AGAGCTCAGACTC-AC---AATGTCAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96420732 24 + 96509753 AGAGCTCAGACTC-AC---AATGTCAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16891723 24 - 16982598 AGAGCTCAGACTC-AC---AATGTCAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3693710 24 - 3785965 AGAGCTCAGACTC-AC---AATGTCAAT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 78305 24 - 179258 AGAGCTCAGACTC-AC---AATGTCAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563928 24 - 5823884 AGAGCTCAGACTC-AC---AATGTCAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46190 24 + 372756 AGAGCTGAGACTC-AC---AGTGTCAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283403 25 + 16356641 AGAGCTCAGACTCAAC---AGTGTTGAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152578 24 + 1231380 AGAGCTCAGACTC-AC---AGTGTCAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682358 24 + 11732439 AGAGCTCAGACTC-AC---AGCGTCAAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22846570 21 + 22939663 AGAGCTCACACCC-AC---A---TCAAT i otoGar3.GL873542 I 17 C 0 s mm10.chr2 181793772 24 + 182113224 GGAACTCTGGTCC-AC---ATCAGCAAT i mm10.chr2 I 7 C 0 s canFam3.chr24 47609041 25 + 47698779 GGAGCTCAGGCTCCGC---GACACCAAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1858952 38 - 2029793 I e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=105300.000000 s hg38.chr20_KI270870v1_alt 112532 7 + 183433 CCTGTTA s panTro5.chr20 66438758 7 + 66533130 CCTGTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113898 7 + 62195757 CCTGTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503146 7 - 578057 CCTGTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026142 7 - 110113093 CCTGTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92752760 7 - 92844088 CCTGTTA i rheMac8.chr10 C 0 I 3161 s macFas5.chr10 96420756 7 + 96509753 CCTGTTA i macFas5.chr10 C 0 I 2537 s macNem1.NW_012014244v1 16891747 7 - 16982598 CCTGTTA i macNem1.NW_012014244v1 C 0 I 2854 s cerAty1.NW_012001373v1 3693734 7 - 3785965 CCTGTTA i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 78329 7 - 179258 CCTGTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5563952 7 - 5823884 CCTGTTA i colAng1.NW_012114444v1 C 0 I 2490 s calJac3.chrUn_GL286459 46214 7 + 372756 CCTGTTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283428 7 + 16356641 CCTGTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152602 7 + 1231380 CCTGTTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682382 7 + 11732439 CCTGTTA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1858990 7 - 2029793 CCTGTTA i proCoq1.NW_012150197v1 I 38 C 0 s otoGar3.GL873542 22846591 7 + 22939663 CCTGCTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793796 7 + 182113224 TCTGTTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47609066 7 + 47698779 CCTGTGA i canFam3.chr24 C 0 C 0 e chlSab2.chr2 90273961 2150 - 90373283 I e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=70963.000000 s hg38.chr20_KI270870v1_alt 112539 6 + 183433 AAAGCA s panTro5.chr20 66438765 6 + 66533130 AAAGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113905 6 + 62195757 AAAGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503153 6 - 578057 AAAGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026149 6 - 110113093 AAAGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92755928 6 - 92844088 AAAACA i rheMac8.chr10 I 3161 C 0 s macFas5.chr10 96423300 6 + 96509753 AAAACA i macFas5.chr10 I 2537 C 0 s macNem1.NW_012014244v1 16894608 6 - 16982598 AAAACA i macNem1.NW_012014244v1 I 2854 C 0 s cerAty1.NW_012001373v1 3693741 6 - 3785965 AAAACA i cerAty1.NW_012001373v1 C 0 I 3184 s chlSab2.chr2 90276111 6 - 90373283 aaaaca i chlSab2.chr2 I 2150 C 0 s manLeu1.NW_012101652v1 78336 6 - 179258 AAAACA i manLeu1.NW_012101652v1 C 0 I 2394 s colAng1.NW_012114444v1 5566449 6 - 5823884 aaaaca i colAng1.NW_012114444v1 I 2490 C 0 s calJac3.chrUn_GL286459 46221 6 + 372756 AAAATA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283435 6 + 16356641 AAAATA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152609 6 + 1231380 AAAATA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682389 6 + 11732439 AAAATA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1858997 6 - 2029793 AAAACA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22846598 6 + 22939663 AAACCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793803 6 + 182113224 GAAGTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47609073 6 + 47698779 AAACCA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=686865.000000 s hg38.chr20_KI270870v1_alt 112545 55 + 183433 AGGTCTTCCCATCTTGGCCAGGAAAGCCTCTCTCTTCCCACAAGGAGCGCAGGCC s panTro5.chr20 66438771 55 + 66533130 AGGTCTTCCCGTCTTGGCCAGGAAAGCCTCTCTCTTCCCACAAGGAGCGCAGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113911 55 + 62195757 AGGTCTTCCCGTCTTGGCCAGGAAAGCCTCTCTCTTCCCACAAGGAGCGCAGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503159 55 - 578057 AGGTCTTCCCATCTTGGCCAGGAAAGCCTCTCTCTTCCCACAAGGAGCGCAGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026155 55 - 110113093 AGGTCTTCCCATCTTGGCCAGGAAAGCCTCTCTCTTCCCACAAGGAGCGCAGGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92755934 55 - 92844088 AGGTCTTCCCATCTTGGCCAGGAAAGCCTCTGTCTTCCCGCAAGGAGCGCAGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423306 55 + 96509753 AGGTCTTCCCATCTTGGCCAGGAAAGCCTCTGTCTTCCGGCAAGGAGCGCAGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16894614 55 - 16982598 AGGTCTTCCCATCTTGGCCAGGAAAGCCTCTGTCTTCCCGCAAGGAGCGCAGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3696931 55 - 3785965 aGGTCTTCCCATCTTGGCCAGGAAAGCCTCTGTCTTCCCGCAAGGAGCGCAGGCC i cerAty1.NW_012001373v1 I 3184 C 0 s chlSab2.chr2 90276117 55 - 90373283 aGGTCTTCCCATCTTGGCCAGGAAAGCCTCTGTCTTCCCACAAGGAGTGCAGGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 80736 55 - 179258 aGGTCTTCCCATCTTGGCCAGGAAAGCCTCTGTCTTCCCGCAAGGAGCGCAGGCC i manLeu1.NW_012101652v1 I 2394 C 0 s colAng1.NW_012114444v1 5566455 55 - 5823884 aGGTCTTCCCATCTTGGCCAGGAAAGCCTCTGTCTTCCCGCAAGGAGTGCAGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46227 55 + 372756 AGGTACTCCCATCTTGGCAAGGAAAGCCTCTGTCTTCCCACAGGCAGCACAGGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283441 55 + 16356641 ACGTACTCCCATCTTGGCCAGGAAAGCCTCTGTCTTCCCACAGGGAGCGCAGGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152615 55 + 1231380 AGGTGCTTCCATCTTGGCCAGGAAAGCCTCTGTCTTCCCACAGAGAGCGCAGGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682395 55 + 11732439 AGGGACTCCCATCTTGGCCAGGAAAGCCTCTGTCTTCCCACAGGGAGCGCCGGCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1859003 55 - 2029793 AGGTCTCCCCGTCCTGGCCAGGGCTGCCTCTGTCCTCCCATGACGAGCGCAGGCC i proCoq1.NW_012150197v1 C 0 I 67 s otoGar3.GL873542 22846604 54 + 22939663 AGGCCTTTCTATCTCAGCCAGGGATGCCTCTGT-CTTCTATGAAGAGCCCAAACT i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181793809 55 + 182113224 GGTTCTTTGTCTCCACTTTCAGACAGGTTTGGTTCCCCCACAAGGGGCTGAAATC i mm10.chr2 C 0 I 5 s canFam3.chr24 47609079 54 + 47698779 AGGTCTTCCCATCTTGGGCACTG-GGCATGGCTCTTCCGAGGAGGAGCTCAAGCA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=79935.000000 s hg38.chr20_KI270870v1_alt 112600 8 + 183433 TGCCCCTC s panTro5.chr20 66438826 8 + 66533130 TGCCCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113966 8 + 62195757 TGCCCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503214 8 - 578057 TGCTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026210 8 - 110113093 TGCCCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92755989 8 - 92844088 TGCCCGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423361 8 + 96509753 TGCCCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16894669 8 - 16982598 TGCCCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3696986 8 - 3785965 TGCCCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276172 8 - 90373283 TGCCCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 80791 8 - 179258 TGCGCCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5566510 8 - 5823884 TGCCCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46282 8 + 372756 TGCCCCTC i calJac3.chrUn_GL286459 C 0 I 300 s saiBol1.JH378156 16283496 8 + 16356641 TGCCCCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152670 8 + 1231380 TGCCCCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682450 8 + 11732439 TGCCCCTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22846659 7 + 22939663 TGCCCTC- i otoGar3.GL873542 I 1 I 2 s mm10.chr2 181793869 7 + 182113224 TGCTCTC- i mm10.chr2 I 5 C 0 s canFam3.chr24 47609133 7 + 47698779 TGGCCTC- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859058 67 - 2029793 I e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=263256.000000 s hg38.chr20_KI270870v1_alt 112608 43 + 183433 CCACCTGCCTTAGGTGACCTGGCACAG-------G-CGTC---------------TGGGTCTTACA---------------------- s panTro5.chr20 66438834 43 + 66533130 CCACCCGCCTTAGGTGACCTGGCACAG-------G-TGTC---------------TGGGTCTTACA---------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62113974 43 + 62195757 CCACCCGCCTTAGGTGACCTGGCACAG-------G-TGTC---------------TGGGTCTTACA---------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503222 43 - 578057 CCAGCTGCCTTAGGTGACCTGGCACAG-------G-CGTC---------------TGGGTCTTACA---------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026218 43 - 110113093 CCGCCTGCCTTGGGCGACCTGGCACAG-------G-CGTC---------------TGGGTCTTACG---------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92755997 43 - 92844088 CCACTTGCCTTAGGCAACTTGGCGCAG-------G-CATC---------------TGGGTCTTACA---------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423369 43 + 96509753 CCACTTGCCTTAGGCAACTTGGCGCAG-------G-CATC---------------TGGGTCTTACA---------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16894677 43 - 16982598 CCACTTGCCTTAGGCAACTTGGCGCAG-------G-CATC---------------TGGGTCTTACA---------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3696994 43 - 3785965 CCACTTGCCTTAGGCTACTTGGCGCAG-------G-CATC---------------TGGGTCTTACA---------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276180 43 - 90373283 CCACCTGCCTTAGGCGACTTGGCGCAG-------G-CATC---------------TGGGTCTTACA---------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 80799 43 - 179258 CCACTTGCCTTAGGCTACTTGGCGCAG-------G-CATC---------------TGGGTCTTACA---------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5566518 43 - 5823884 CCACCTGCCTTAGGTGACTTGGCGCAG-------G-CATC---------------TGGGTCTTACA---------------------- i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16283504 54 + 16356641 CCGCCTGCCTTAGGTGACCTTGCACGG-------G-CATC-TCCCTTTGTAAGC-AAGGGCTTA------------------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152678 56 + 1231380 CCGCCTGCCTTAGGTGACCTTGCACAG-------G-CGTC-TCCCTTTGTAAGC-AAGGGCTTACA---------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682458 57 + 11732439 CCGCCTGCCTCAGGTGACCTTGCGCAG-------G-CGTC-TCCCTTTGTAAGCAAAGGGTTTACG---------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22846668 50 + 22939663 GAGGTTGCCCTGGGTGACCTCGAATGGTGTCTCCA-CCTC---------------AGTGCTCTGTA---------------------- i otoGar3.GL873542 I 2 I 13 s mm10.chr2 181793876 33 + 182113224 ---------TCACGCAGCCT--CACAG-------ATCATC---------------TTGCTTGTCTA---------------------- i mm10.chr2 C 0 I 15 s canFam3.chr24 47609140 64 + 47698779 ----------TGGGCGACC--GCCCAT-------G-TGTTctccatctctc----tgggtgtcagtttgccgctctggaaatgaggtg i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859058 67 - 2029793 I e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e calJac3.chrUn_GL286459 46290 300 + 372756 I a score=529698.000000 s hg38.chr20_KI270870v1_alt 112651 56 + 183433 ATGGCAGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCACAGGAGCC s panTro5.chr20 66438877 56 + 66533130 ATGGCAGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCACAGGAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114017 56 + 62195757 ATGGCAGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCACAGGAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503265 56 - 578057 GTGGCAGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCACAGGAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026261 56 - 110113093 GTGTCAGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCACAAGAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92756040 56 - 92844088 ATGGCTGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCGCAAGAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423412 56 + 96509753 ATGGCTGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCGCAAGAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16894720 56 - 16982598 ATGGCTGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCGCAAGAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697037 56 - 3785965 GTGGCTGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCGCAAGAGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276223 56 - 90373283 ATGGCTGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCGCAAGAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 80842 56 - 179258 ATGGCTGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCGCAAGAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5566561 56 - 5823884 ATGGCTGCTCCTTGTAGTCCTTGAGCCGTGGATGCATCCGACAGCCCGCAGGAGCC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16283558 42 + 16356641 --------------CAGTCCTTCAGTGGTGGCTGCATCCAGCAGCCTGCCAGAGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152734 56 + 1231380 GTGGCAGCTCCTCGCAGTCCTTCAGTGGTGGCTGCAACCGACAGCCTGCCAGAGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682515 56 + 11732439 GTGGCAGCTCCTTGTAGTCCTTCGGTGGTGGCTGCATCTGACAGCCCGCCAGAGCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1859125 56 - 2029793 ATGGCAGCTCCTTGCAGGCCTTGACCTGGGGACGCGTCCAGCAGCCCACAGGAGCC i proCoq1.NW_012150197v1 I 67 I 105 s otoGar3.GL873542 22846731 52 + 22939663 ATAACAGCTCCTCTCAGAACTTGAACTGAGTCTGCAGCCTGCAG----GAGGAGCC i otoGar3.GL873542 I 13 C 0 s mm10.chr2 181793924 28 + 182113224 GTAGCAGCTTCTTGCATCCATAGAACTC---------------------------- i mm10.chr2 I 15 C 0 s canFam3.chr24 47609204 52 + 47698779 gtGTCCGCTTCTAG-GGTCTGTGGTCTGTGAACGTGCTCAGCGGCCCCCAAGA--- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e calJac3.chrUn_GL286459 46290 300 + 372756 I a score=56871.000000 s hg38.chr20_KI270870v1_alt 112707 7 + 183433 TGATACA s panTro5.chr20 66438933 7 + 66533130 TGATATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114073 7 + 62195757 TGATATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503321 7 - 578057 TGATATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026317 7 - 110113093 TGATATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92756096 7 - 92844088 TGATATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423468 7 + 96509753 TGATATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16894776 7 - 16982598 TGATATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697093 7 - 3785965 TGATATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276279 7 - 90373283 TGATATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 80898 7 - 179258 TGATATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5566617 7 - 5823884 TGATACG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16283600 7 + 16356641 TGATGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152790 7 + 1231380 TGATGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682571 7 + 11732439 CGATTTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22846783 7 + 22939663 CGAGTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181793952 7 + 182113224 TGAACCG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1859181 105 - 2029793 I e canFam3.chr24 47609256 0 + 47698779 C e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e calJac3.chrUn_GL286459 46290 300 + 372756 I a score=885314.000000 s hg38.chr20_KI270870v1_alt 112714 93 + 183433 TGGTGAACTCTGGCCTTACACTCCACACTGGCCCCTT----------TGTGCCTGAG-GCTGCTGTGGGAGCTGTGGTCCTGCCGCCACGT-TGGTTGGCATAGT s panTro5.chr20 66438940 93 + 66533130 TGGTCAACTCTGGCCTTACACTCCACACTGGCCCCTT----------TGTGCCTGAG-GCTGCTGTGGGAGCTGTGGTCCTGCCGCCACGT-TGGTTGGCATAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114080 93 + 62195757 TGGTCAACTCTGGCCTTACACTCCACACTGGCCCCTT----------TGTGCCTGAG-GCTGCTGTGGGAGCTGTGGTCCTGCCGCCACGT-TGGTTGGCATAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503328 93 - 578057 TGGTGAACTCTGGCCTTACACTCCACACTGGCCCCTT----------TGTGCCTGAG-GCTGCTGTGGGAGCTGTGGTCCTGCCGCCACGT-TGGTTGGCATAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026324 93 - 110113093 TGGTGAACTCTGGCCTCACACTCCACACTGGCCCCTT----------TGTGGCTGAG-GCTGCTGTGGGAGCTGTGGTCCTGCCGCCACGC-TGGTTGGCATAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92756103 93 - 92844088 TGGTGAACTCTGGCCTCACACTCCACACCGGCCCCTT----------TGGCCCCGAG-GCTGCTGTGGGAGCTGTGGTCCTGCTGCCACGG-TGGTTGGCATAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423475 93 + 96509753 TGGTGAACTCTGGCCTCACACTCCACACCGGCCCCTT----------TGGCCCCGAG-GCTGCTGTGGGAGCTGTGGTCCTGCTGCCACGG-TGGTTGGCATAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16894783 93 - 16982598 TGGTGAACTCTGGCCTCACACTCCACACCGGCCCCTT----------TGGCCCTGAG-GCTGCTGTGGGAGCTGTGGTCCTGCTGCCACGG-TGGTTGGCATAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697100 93 - 3785965 TGGTGAACTCTGGCCTCACACTCCGCACCGGCCCCTT----------TGGCCCCGAG-GCTGCTGTGGGAGCTGTGGTCCTGCTGCCACGG-TGATTGGCATAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276286 93 - 90373283 TGGTGAACTCTGGCCTCACACTCCACACCGGCCCCTT----------TGGCCCCGAG-GCTGCTGTGGGAGCTGTGGTCCTGCTGCCACGG-TGGTTGGCATAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 80905 93 - 179258 TGGTGAACTCTGGTCTCACACTCCGCACCGGCCCCTT----------TGGCCCCGAG-GCTGCTGTGGGAGCTGTGGTCCTGCTGCCACGG-TGGTTGGCATAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5566624 93 - 5823884 TGGTGAACTCTGGCCTCACACTCCACAGCGGCCCCTT----------TGGCCCCGAG-GCTGCTGTGGGAGCTGTGGTCCTGCTGCCACGG-TGGTTGGCATAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46590 104 + 372756 TGGTCAACTCTGGCCTCACACTCCACACCGGCCCCTGTCTGGCCACTTTTGCCGGAG-GCTGCTGTGGGAGCCATGGTCCTGTTGCTATGGTTGGTTGGCATAAT i calJac3.chrUn_GL286459 I 300 C 0 s saiBol1.JH378156 16283607 103 + 16356641 TGGTCAGCTCTGGCCTCATACTCCACACCGGCCGGTGTCTGGCCAC-TTTGCCGGAG-GCTGCCGTGGGAGCCATGGTCCTGCTGCTACGGTTGGTTGGCATAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152797 103 + 1231380 TGGTCAACTCTGGCCTCACACTCCACACCAGCCCCTGTCTGGCCAC-TTTGCCGGAG-GCTGCCGTGGGAGCCATGGTCCTACTGCTGTGGTTGGTTGGCATAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682578 104 + 11732439 TGGTCAGCTCCGGCCTCACACTCCACACCGGCCCCTGTCTGGACACTTTTGCCGGAG-GCTGCTGTGGGAGCCATGGTCCTGCTGCTACGGTTGGTTGGCATAAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22846790 100 + 22939663 TGGTGACCTGTGGCCTCACACCCTATACAGGATCCTCTGTAGCCAT-TCTTTCCTGG-TCTCCTCTGGGAACTGTGATTCTGCTGCCATGA-TTG--GGCATGTG i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181793959 97 + 182113224 TGATGGACCCTTGACTCTCATACCGCATAGGCGCCCCTATAGCTGTTCTAACCTGAGTAATCCTATGAGCCTTTTGGCTGTGCCG----AG-TGGTCAGTGT--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47609256 52 + 47698779 -------CCCTTGCCTCACA---------------------------TG-----GAG-CTGACTCTAGGAGAAGTGG------------GT-TGGGTGGCATGCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859181 105 - 2029793 I e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=185903.000000 s hg38.chr20_KI270870v1_alt 112807 13 + 183433 CAGTACTCATGCT s panTro5.chr20 66439033 13 + 66533130 CAGTACTCATGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114173 13 + 62195757 CAGTACTCATGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503421 13 - 578057 CAGTACTCATGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026417 13 - 110113093 CAGTACTCATGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92756196 13 - 92844088 CAGTACTCATGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423568 13 + 96509753 CAGTACTCATGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16894876 13 - 16982598 CAGTACTCATGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697193 13 - 3785965 CAGTACTCATGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276379 13 - 90373283 CAGTACTCATGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 80998 13 - 179258 CAGTACTCATGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5566717 13 - 5823884 CAGTACTCATGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46694 13 + 372756 CAGTACTCATGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283710 13 + 16356641 CAGTACTCATGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152900 13 + 1231380 CAATACTCATGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682682 13 + 11732439 CAGTACTCATGCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1859286 13 - 2029793 CAGTGCTCATGAT i proCoq1.NW_012150197v1 I 105 C 0 s otoGar3.GL873542 22846892 13 + 22939663 CAGCACCCATGAT i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181794056 13 + 182113224 TAGTGCGTCTGTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47609308 13 + 47698779 CTGTGCCCAAGAT i canFam3.chr24 C 0 C 0 e micMur3.chr18 56863418 821 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=1374307.000000 s hg38.chr20_KI270870v1_alt 112820 92 + 183433 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATAGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT s panTro5.chr20 66439046 92 + 66533130 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATAGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114186 92 + 62195757 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATAGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503434 92 - 578057 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATAGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026430 92 - 110113093 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATAGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTAGGTGCCCTGC---------CTTGTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92756209 92 - 92844088 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATCGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423581 92 + 96509753 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATCGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16894889 92 - 16982598 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATCGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697206 92 - 3785965 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATCGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276392 92 - 90373283 CAGAAGCTTCCAGAGCTTCCTGCTGGTTTGGTTATATTGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81011 92 - 179258 CAGAAGTTTCCAGAACTTCCTGCTGGTTTGGTTATATCGGGAGACAGATGATGGTTAAGAAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5566730 92 - 5823884 CAGAAGTTTCCAGAGCTTCCTGCTGGTTTGGTTATATCGGGAGACAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGTGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46707 92 + 372756 CAGAGGCTTCCAGAGCTTCCTGCTGTTTTGGTTATGTAGGGAGGCAGATGATGGTTCAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGGGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283723 92 + 16356641 CAGAAGCTTCCAGAGCTTCCTGCTGTTTTGGTGATGTGGGGAGGCGGATGATGCTTAAGGAAGGGGAACTCCTGGGTGTCCTGC---------CTTGGACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1152913 88 + 1231380 CAGAAGCTTCCAGAGCTTCCTGCTGTTTTGGTTATGTAGGGTGGCAGATGATGGTTAAGGAAGAGGAACTCCTCCGTGTCCTG-------------GGGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682695 92 + 11732439 CAGAAGCTTCCAGAGCTTCCTGCTGTTTTGGTTATGTAGGGAGGCAGATGATGGTTAAGGAAGAGGAACTCCTGGGTGTCCTGC---------CTTGGGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56864239 90 + 57149010 CAGAAGTTTCCAGAG-TTCCCGCTGGTTTGGCTATGTTGGGAGACAGATGATGGTTGAGGACCAGGAACTCCT-GGGGCCTTGC---------CTTGTGCT i micMur3.chr18 I 821 I 183 s proCoq1.NW_012150197v1 1859299 92 - 2029793 CGGAAGTTTCCAGAGCTTCCCGCTGGTTTGGCTATGTTGGGAGACAGATGATGATTGAGGACCAGGAACTCCTGGGGGCCTTGC---------CTTGTGCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22846905 92 + 22939663 CAGAAGTTTCCAGAGCTTCCTACTGCTTTGGCTATGTTGGGAGACAGATGATGGCTGAAGACCAGGAACCCCTAGGGGCCTTGC---------CTTGTGCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794069 80 + 182113224 TGGAAGTTTTTA----------CCGGTTTGGTAATGTG-----------GATGGCTGAAGGTGAGGAACTTCGGAGGGTCTCACTTTCATCCTCTTGTACT i mm10.chr2 C 0 C 0 s canFam3.chr24 47609321 91 + 47698779 CAGAAGTTTCTAGAGTTTTCTG-TGGTTTGGTTCGATGGGGAGACGGGTGATGGTGGAGGGTGAGGAATTCCCCGGGGCCTCAC---------CTTCATCC i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 245563 214 - 397369 I a score=14972.000000 s hg38.chr20_KI270870v1_alt 112912 1 + 183433 T s panTro5.chr20 66439138 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114278 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503526 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026522 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92756301 1 - 92844088 T i rheMac8.chr10 C 0 I 7 s macFas5.chr10 96423673 1 + 96509753 T i macFas5.chr10 C 0 I 7 s macNem1.NW_012014244v1 16894981 1 - 16982598 T i macNem1.NW_012014244v1 C 0 I 7 s cerAty1.NW_012001373v1 3697298 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 I 7 s chlSab2.chr2 90276484 1 - 90373283 T i chlSab2.chr2 C 0 I 7 s manLeu1.NW_012101652v1 81103 1 - 179258 T i manLeu1.NW_012101652v1 C 0 I 7 s colAng1.NW_012114444v1 5566822 1 - 5823884 T i colAng1.NW_012114444v1 C 0 I 7 s calJac3.chrUn_GL286459 46799 1 + 372756 T i calJac3.chrUn_GL286459 C 0 I 7 s saiBol1.JH378156 16283815 1 + 16356641 T i saiBol1.JH378156 C 0 I 7 s cebCap1.NW_016107870v1 1153001 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 I 7 s aotNan1.NW_018500483v1 2682787 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 I 7 s proCoq1.NW_012150197v1 1859391 1 - 2029793 T i proCoq1.NW_012150197v1 C 0 I 32 s otoGar3.GL873542 22846997 1 + 22939663 T i otoGar3.GL873542 C 0 I 7 s mm10.chr2 181794149 1 + 182113224 T i mm10.chr2 C 0 I 6 s canFam3.chr24 47609412 1 + 47698779 C i canFam3.chr24 C 0 C 0 e micMur3.chr18 56864329 183 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=268610.000000 s hg38.chr20_KI270870v1_alt 112913 29 + 183433 -----------CTAGGGTGAGAGATGCAGGAGGGTCAGTG s panTro5.chr20 66439139 29 + 66533130 -----------CTAGGGTGAGAGATGCAGGAGGGTCAGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114279 29 + 62195757 -----------CTAGGGTGAGAGATGCAGGAGGGTCAGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503527 29 - 578057 -----------CTAGGGTGAGAGATGCAGGAGGGTCAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026523 29 - 110113093 -----------CCAGGGTGAGAGAGGCAGGAGGGTCAGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92756309 29 - 92844088 -----------CTGGGATGAGAGATGCAGGAGGGTCAGTA i rheMac8.chr10 I 7 C 0 s macFas5.chr10 96423681 29 + 96509753 -----------CTGGGATGAGAGATGCAGGAGGGTCAGTA i macFas5.chr10 I 7 C 0 s macNem1.NW_012014244v1 16894989 29 - 16982598 -----------CTGGGATGAGAGATGCAGGAGGGTCAGTA i macNem1.NW_012014244v1 I 7 C 0 s cerAty1.NW_012001373v1 3697306 29 - 3785965 -----------CTGGGGTGAGAGATGCAGGAGGGTCAGTA i cerAty1.NW_012001373v1 I 7 C 0 s chlSab2.chr2 90276492 29 - 90373283 -----------CTGGGGTGAGAGATGCAGGAGGGTCAGTA i chlSab2.chr2 I 7 C 0 s manLeu1.NW_012101652v1 81111 29 - 179258 -----------CTGGGGTGAGAGATGCAGGAGGGTCAGTA i manLeu1.NW_012101652v1 I 7 C 0 s colAng1.NW_012114444v1 5566830 29 - 5823884 -----------CTGGGGTGAGAGATGCAGGAGGGTCAGTA i colAng1.NW_012114444v1 I 7 C 0 s calJac3.chrUn_GL286459 46807 29 + 372756 -----------CGGGGGGGAGAGACGCAAGAAGGTCAGCA i calJac3.chrUn_GL286459 I 7 C 0 s saiBol1.JH378156 16283823 29 + 16356641 -----------CTGGGGGGAGAGATGCAAGAGGGTCAGCC i saiBol1.JH378156 I 7 C 0 s cebCap1.NW_016107870v1 1153009 29 + 1231380 -----------CGGGGGGGAGAGATGCAAGAGGGTCAGCG i cebCap1.NW_016107870v1 I 7 C 0 s aotNan1.NW_018500483v1 2682795 29 + 11732439 -----------CTGGGGGGAGAGATGCAACAGGGTCAGCA i aotNan1.NW_018500483v1 I 7 C 0 s otoGar3.GL873542 22847005 26 + 22939663 -----------CTGGGGTGGGAGTTGTTAGCGAAGCA--- i otoGar3.GL873542 I 7 C 0 s mm10.chr2 181794156 16 + 182113224 -----------TTGGAATGGG----GCAGGG--------- i mm10.chr2 I 6 C 0 s canFam3.chr24 47609413 40 + 47698779 CTGGGCACTTGCTGGCTCCCAGGCTGTGTGAGGCCCAGCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859392 32 - 2029793 I e micMur3.chr18 56864329 183 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=377788.000000 s hg38.chr20_KI270870v1_alt 112942 48 + 183433 TCACCCCCTCCCCAAACTGCCCTTCTTAGCACAGCCCAAAAGTCTTCC s panTro5.chr20 66439168 48 + 66533130 TCACCCCCTCCCCAAACTGCCCTTCTTAGCACAGCCCAAAAGTCTTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114308 48 + 62195757 TCACCCCCTCCCCAAACTGCCCTTCTTAGCACAGCCCAAAAGTCTTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503556 47 - 578057 CCA-CCCCTCCCCAAACTGCCCTTCTTAGCACAGCCCAAAAGTCTTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026552 48 - 110113093 TCACCCCCTCCCCAAACTGCCCTTCTTAGCGCGGTCCAAAAGTCTTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92756338 41 - 92844088 TCACCCCCTCCCCAAACTACCCTTCTTAGCCC-------GAGTCCTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423710 41 + 96509753 TCACCCCCTCCCCAAACTACCCTTCTTAGCCC-------GAGTCCTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895018 41 - 16982598 TCACCCCCTCCCCAAACTACCCTTCTTAGCCC-------GAGTCCTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697335 41 - 3785965 TCACCCCCTCCCCAAACTACCCTTCTTAGCCC-------GAGTCTTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276521 43 - 90373283 TCACCCCCTCCCCAAACTGCCGTTCTTAGCCC-----AAGAGTCTTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81140 41 - 179258 TCACCCCCTCCCCAAACTACCCTTCTTAGCCC-------GAGTCTTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5566859 43 - 5823884 TCACCCCCTCCCCAAACTGCCCTTCTTAGCCC-----AAGAGTCTTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46836 42 + 372756 TCA-CCCTTCTTCAAACTGC---TCTTAGCATAGCCC--GAGTCCTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283852 45 + 16356641 TCA-CCCCTCCCCAAACTGCTCTTCTTAGCACAGCTC--GAGTCCTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153038 45 + 1231380 TCA-CCCCTCCCCAAACTGCTCTCCTTAGCACAGCCC--GAGTCCTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682824 42 + 11732439 TCA-CCCCTCCCCAAACTGC---TCTTAGCACATCCC--GAGTCTGCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1859424 47 - 2029793 TCACCCCCTCCCCAAACTGCCC-TCTGAGCACAGCCGAAGAGTCCTCC i proCoq1.NW_012150197v1 I 32 I 469 s otoGar3.GL873542 22847031 45 + 22939663 TCACTTCCTCCCCAAACTGCCCTTCTGAGCACAGCCTGAGAATCC--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794172 33 + 182113224 ---------------GTTGACCTTCTCAGTGCATCCAACCAGTTTTGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47609453 19 + 47698779 ---GCACCTCC-------GCCCTTTTTAG------------------- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56864329 183 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=1674151.000000 s hg38.chr20_KI270870v1_alt 112990 173 + 183433 AC-GAGGCAGATGCTGTTGGTTCCTGGTTCACGGGCCCTCCCGGCTTCTTTTCCCTGCGTGGAAGCTGGGACCCACACCA-GCTACAGGCACT--GGTGGGATCTTCACCACTGTCTG--------------TGGCTTGGGC--------CACAGATTCCTTTC-TGCCTGT-CAGTCCTGGCTCCGTTTGCTGGGGCACG s panTro5.chr20 66439216 173 + 66533130 AC-GAGGCAGATGCTGTTGGTTCCTGGTTCACGGGCCCTCCTGGCTTCTTTTCCCTGCGTGGAAGCTGGGACCCACACCA-GCTACAGGCACT--GGTGGGATCTTCACCACTGTCTG--------------TGGCTTGGGC--------CACGGATTCCTTTC-TGCCTGT-CAGTCCTGGCTCCGTTTGCTGGGGCACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114356 173 + 62195757 AC-GAGGCAGATGCTGTTGGTTCCTGGTTCACGGGCCCTCCTGGCTTCTTTTCCCTGCGTGGAAGCTGGGACCCACACCA-GCTACAGGCACT--GGTGGGATCTTCACCACTGTCTG--------------TGGCTTGGGC--------CACGGATTCCTTTC-TGCCTGT-CAGTCCTGGCTCCGTTTGCTGGGGCACG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503603 173 - 578057 AC-GAGGCAGATGCTGTTGGTTCCTGGTTCACGGGCCCTCCTGGCTTCTTTTCCCTGCGTGGAAGCTGGGACCCACACCA-GCTACAGGCACT--GGTGGGATCTTCACCACTGTCTG--------------TGGCTTGGGC--------CACAGATTCCTTTC-TGCCTGT-CAGTCCTGGCTCCGTTTGCTGGGGCACG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110026600 173 - 110113093 TC-AAGGCAGATGCTGTCAGCTCCTGGTTCATTGGTCCTCCTGGCTTCTTTTCCCTGCACGGAAGCTGGGACCCACACCA-GCTACAGGCACT--GGTGGAATCTTCACCACTGTCTT--------------TGGCTTGGGC--------CACAGATTCCTTTC-TGCCTGT-CAGTCCTGGCTCAGTTTGCTGGGGCACG i nomLeu3.chr13 C 0 I 1385 s rheMac8.chr10 92756379 174 - 92844088 ACTAAGGCAGACCCTGTCAGCTCCTGGTTCATTGGCCCTCCTGGCTTCTTTTCCCTGCGTGGAAGCTGGGACTCACACCA-GCTACAGGCACT--GGTGGAATCTTCACCACTGCCTT--------------TGGCTTGGGC--------CACAGATTCCTTTC-TGCCTGT-CAGACCTGGCTCAGTTTGCTGGGGCACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423751 174 + 96509753 ACTAAGGCAGACCCTGTCAGCTCCTGGTTCATTGGCCCTCCTGGCTTCTTTTCCCTGCGTGGAAGCTGGGACTCACACCA-GCTACAGGCACT--GGTGGAATCTTCACCACTGCCTT--------------TGGCTTGGGC--------CACAGATTCCTTTC-TGCCTGT-CAGACCTGGCTCAGTTTGCTGGGGCACG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895059 174 - 16982598 ACTAAGGCAGACCCTGTCAGCTCCTGGTTCATTGGCCCTCCTGGCTTCTTTTCCCTGCGTGGAAGCTGGGACTCACACCA-GCTACAGGCACT--GGTGGAATCTTCACCACTGCCTT--------------TGGCTTGGGC--------CACAGATTCCTTTC-TGCCTGT-CAGACCTGGCTCAGTTTGCTGGGGCACG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697376 174 - 3785965 ACTAAGGCAGACCCTGTCAGCTCCTGGTTCATTGGCCCTCCTGGCTTCTTTTCCCTGCGTGGAAGCTGGGACTCACACCA-GCTACAGGCACT--GGTGGAATCTTCCCCACCGCCTT--------------CGGCTTGGGC--------CACAGATTCCTTTC-TGCCTGT-CAGACCTGGCTCAGTTTGCTGGGGCACG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276564 174 - 90373283 ACCGAGGCAGACCCTGTCAGCTCCTGGTTCATTGGCCCTCCTGGCTTCTTTTCCCTATGTGGAAGCTGGGACTCACACCA-GCTACAGGCACT--GGTGGAATCTTCACCACTGCCTT--------------TGGCTTGGGC--------CACAGATTCCTTTC-TGCCTGT-CAGACCTGGCTCAGTTTGCTGGGGCACG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81181 174 - 179258 ACTAAGGCAGACCCTGTCAGCTCCTGGTTCATTGGCCCTCCTGGCTTCTTTTCCCTGTGTGGAAGCTGGGACTCACACCA-GCTACAGGCACT--GGTGGAATCTTCACCACCGCCTT--------------CGGCTTGGGC--------CACAGATTCCTTTC-TGCCTGT-CAGACCTGGCTCAGTTTGCTGGGGCACG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5566902 173 - 5823884 ACCAAGGCAGACCCTGTCAGCTCCTGGTTCATTGGCCCTCCTGGCTGCTTTTCCCTGTGTGGAAGCC-GGACTCACACCA-GCTACAGGCACT--GGTGGAATCTTCACCCCTACCTT--------------TGCCTTGGGC--------CGTGGATTCCTTTC-TGCCTGT-CAGACCTGGCTCAGTTTGCTGGGGCACG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 46878 176 + 372756 ACCAAGGCGGATACTGTCAGCTCCTGGTTCATTAGCCCTCCTGGACTCATTTTCCTCCATGGGAGCCTCAACCCACACCA-GCTACAGGCACTGGGGTGGAATCTTCACCTCCATCTT--------------TGGCTTGGGC--------CACAGAGTCCCTCC-TGCCTGG-CAGTCCCAGCTCAGTTTGTTGGGGCATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16283897 176 + 16356641 ACCAAGGCAGATGCTGTCAGCTCCTGGTTCATTAGTCCTCCTGGGCTCATTTTCCTCCATGGAAGCTGCGACCCACACCA-GCTGCAGGCACTGGGGTGAAATCTTCACCCCCGTCTT--------------TGGCTTGGGC--------CACAGAGTCCTTCC-TGCCTGG-CAGTCCCAGCTCAGTTTGCTGGGGCATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153083 176 + 1231380 ACCAAGGTGGACGCTGTCAGCTCCTGGTTCATTATCCCTCCTGGGCTCATTTTCCTCCATGGAAGCTGCGACCCTCACCA-GCTACAGGCACTGGGGTGGAATCTTCACCACTGTCTT--------------CGGCTTGGGC--------CACAGAGTCCTTCC-TGCCTGG-CAGTCCCAGCTCAGTTTGCTGGGGCATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2682866 176 + 11732439 ACCAAGGCGGGTGCTGTCAGCTCCGGATTCATTAGCCCTCCTGGGCTCATTTTCCTCCATGGAACCTGCGACCCACACCA-GCTACAGGCACTGGGGTGGAATCTTCACCACCGTCTT--------------TGGCTTGGGC--------CACAGAGTCCTTCC-TGCCTGG-CAGTCCCAGCTCAGTTTGCTGGGGCATG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22847076 168 + 22939663 ACCAGGCCTGGAGT--TCAGCTCCTGGCTC-TCGGGCCACCAGGATTCACTTTCCTCCATGG--------ACCCA---------GCAGGCACTGGGCTGGAGTCTCCACTGCCCCTTTGTGGCTCGGGCTAGTGGCTTGGGC--------CATGGG-CACTTCC-TATCTGG-CAGCCCTGCGTTAGTTTGCTGGGGTG-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794205 159 + 182113224 ACCAGGCAGGATG--GGAATCTCTCAGTGCATTGCCTCCGCTGGCTTTCTTTT-CTCTGTGGAAGCAGAGAACAACACCAGGCTCTGGGTACTAGAACAGGGTCTCTCCTACAAGCTG--------------TGGTTTTGGCTTGGTCTGCACAGACTCCTTCCATACTTGG-TAGA------------------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47609472 138 + 47698779 --------------GGGTAGCCCCTGGGTCCTCGGCCCTCCCGGCCTCACCTCCGTG------------------CACCAGGGTGCAGGTTCTGCAGGAGGGTTGCAGCGGGGGCCTA--------------CAGCTTGGGC--------CAGG--------CC-TGCATGTGTACTCGGAGCCGCTCCTGCCTGGATGCG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e micMur3.chr18 56864329 183 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I a score=131401.000000 s hg38.chr20_KI270870v1_alt 113163 13 + 183433 AAGGTCACAGCTG s panTro5.chr20 66439389 13 + 66533130 AAGGTCACAGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114529 13 + 62195757 AAGGTCACAGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503776 13 - 578057 AAGGTCACAGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756553 13 - 92844088 AAGGTCACAGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423925 13 + 96509753 AAGGTCACAGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895233 13 - 16982598 AAGGTCACAGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697550 13 - 3785965 AAGGTCACAGCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276738 13 - 90373283 AAGGTCACAGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81355 13 - 179258 AAGGTCACAGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567075 13 - 5823884 AAGGTCACAGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47054 13 + 372756 AAGGTCGCAGCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284073 13 + 16356641 AAGGTCGCAGCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153259 13 + 1231380 AGGGTCGCAGCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2683042 13 + 11732439 AAGGTCACAGCTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22847244 13 + 22939663 AAGGGCACACCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794364 5 + 182113224 AAGGT-------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47609610 4 + 47698779 ---------CCTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e micMur3.chr18 56864329 183 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=284036.000000 s hg38.chr20_KI270870v1_alt 113176 28 + 183433 GCAGGGAATGCAGAGACTGTTACCCTCG s panTro5.chr20 66439402 28 + 66533130 GCAGGGAATGCAGAGACTGTTACCCTCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114542 28 + 62195757 GCAGGGAACGCAGAGACTGTTACCCTCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503789 28 - 578057 GCAGGGAATGCAGAGACTGTTACCCTCG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756566 28 - 92844088 GCAGGGAATGCAGAGACTGTTGCCGCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423938 28 + 96509753 GCAGGGAATGCAGAGACTGTTGCCGCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895246 28 - 16982598 GCAGGGAATGCAGAGACTGTTGCCGCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697563 28 - 3785965 GCAGGGAATGCAGAGACTGTTGCCGCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276751 28 - 90373283 GCAGGGAATGCAGAGACTGTTGCCGCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81368 28 - 179258 GCAGGGAATGCAGAGACTGTTGCCGCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567088 28 - 5823884 GCGGTGAATGCAGAGGCTGTTGCCGCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47067 28 + 372756 CCAGGGAAGGCAGAGACTGTTGCCCTTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284086 28 + 16356641 CCAGGGAAGGCAGAGACTGTTGCCCTCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153272 28 + 1231380 CCAGGGAAGGCAGAGGCTGTTGCCCTCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2683055 28 + 11732439 CCAGAGAAGGCAGAGACTGTTGCCCTCG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56864512 28 + 57149010 GCAGAGAATGCAGAGACTGTTGCCCTCG i micMur3.chr18 I 183 I 104 s otoGar3.GL873542 22847257 28 + 22939663 GCAGGGAGTGCAGAGACTGTTGCCCTTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794369 20 + 182113224 --AGGACAT------ACTATAGCCCTGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47609614 10 + 47698779 ---------GCAGGGCCCG--------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e dasNov3.JH569290 245563 214 - 397369 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=13923.000000 s hg38.chr20_KI270870v1_alt 113204 1 + 183433 A s panTro5.chr20 66439430 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114570 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503817 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756594 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423966 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895274 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697591 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276779 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81396 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567116 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47095 1 + 372756 A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284114 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153300 1 + 1231380 A i cebCap1.NW_016107870v1 C 0 I 170 s aotNan1.NW_018500483v1 2683083 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22847285 1 + 22939663 A i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794389 1 + 182113224 A i mm10.chr2 C 0 C 0 s canFam3.chr24 47609624 1 + 47698779 A i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e micMur3.chr18 56864540 104 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=57537.000000 s hg38.chr20_KI270870v1_alt 113205 8 + 183433 GGGCCATA s panTro5.chr20 66439431 8 + 66533130 GGGCCATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114571 8 + 62195757 GGGCCATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503818 8 - 578057 GGGCCATA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756595 8 - 92844088 TGGCCATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423967 8 + 96509753 TGGCCATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895275 8 - 16982598 TGGCCATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697592 8 - 3785965 TGGCCAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276780 8 - 90373283 TGGCCATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81397 8 - 179258 TGGCCATA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567117 8 - 5823884 TGGCCATA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47096 8 + 372756 TGGCCATA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284115 8 + 16356641 TGGCCATG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2683084 8 + 11732439 TGGCCACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22847286 8 + 22939663 TGGCCTCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794390 6 + 182113224 -GGCTGA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47609625 8 + 47698779 GAGCCTCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e micMur3.chr18 56864540 104 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e cebCap1.NW_016107870v1 1153301 170 + 1231380 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=90593.000000 s hg38.chr20_KI270870v1_alt 113213 10 + 183433 GGCCTTATGG s panTro5.chr20 66439439 10 + 66533130 GGCCTTACGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114579 10 + 62195757 GGCCTTACGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503826 10 - 578057 GGCCTTACAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756603 10 - 92844088 GGTCTTATAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423975 10 + 96509753 GGTCTTATAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895283 10 - 16982598 GGTCTTATAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697600 10 - 3785965 GGTCTTATAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276788 10 - 90373283 GGTCTTATAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81405 10 - 179258 GGTCTTATAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567125 10 - 5823884 GGTCTTATAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47104 10 + 372756 GGCCTTACAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284123 10 + 16356641 GGCCTTACGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153471 10 + 1231380 GGCCTTATAA i cebCap1.NW_016107870v1 I 170 C 0 s aotNan1.NW_018500483v1 2683092 10 + 11732439 GGACTTACAG i aotNan1.NW_018500483v1 C 0 I 2739 s otoGar3.GL873542 22847294 10 + 22939663 GGCCTTACAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794396 10 + 182113224 AGCATCACAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47609633 3 + 47698779 -------GAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e micMur3.chr18 56864540 104 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=67210.000000 s hg38.chr20_KI270870v1_alt 113223 7 + 183433 CATTAGT s panTro5.chr20 66439449 7 + 66533130 CATTAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114589 7 + 62195757 CATTAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503836 7 - 578057 CATTAGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756613 7 - 92844088 CATTAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423985 7 + 96509753 CATTAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895293 7 - 16982598 CATTAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697610 7 - 3785965 CATTAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276798 6 - 90373283 CATTA-T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81415 7 - 179258 CATTAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567135 7 - 5823884 CATTAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47114 7 + 372756 CATTAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284133 7 + 16356641 CATTAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153481 7 + 1231380 CATTAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2685841 7 + 11732439 CATTAGT i aotNan1.NW_018500483v1 I 2739 C 0 s otoGar3.GL873542 22847304 7 + 22939663 CATCAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794406 7 + 182113224 TACGAGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47609636 6 + 47698779 CAC-AGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e micMur3.chr18 56864540 104 + 57149010 I e dasNov3.JH569290 245563 214 - 397369 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=25395.000000 s hg38.chr20_KI270870v1_alt 113230 2 + 183433 GA s panTro5.chr20 66439456 2 + 66533130 GA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114596 2 + 62195757 GA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503843 2 - 578057 GA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756620 2 - 92844088 GA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423992 2 + 96509753 GA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895300 2 - 16982598 GA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697617 2 - 3785965 GA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276804 2 - 90373283 GA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81422 2 - 179258 GA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567142 2 - 5823884 GA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47121 2 + 372756 GA i calJac3.chrUn_GL286459 C 0 I 485 s saiBol1.JH378156 16284140 2 + 16356641 GG i saiBol1.JH378156 C 0 I 79 s cebCap1.NW_016107870v1 1153488 2 + 1231380 GG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2685848 2 + 11732439 GG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22847311 2 + 22939663 GA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794413 2 + 182113224 GA i mm10.chr2 C 0 C 0 s canFam3.chr24 47609642 2 + 47698779 GA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 245777 2 - 397369 GG i dasNov3.JH569290 I 214 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e micMur3.chr18 56864540 104 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=545821.000000 s hg38.chr20_KI270870v1_alt 113232 62 + 183433 TGGCCACAGAG------AATGCCAACTTCTGTGCTTTGGACTTGGGA------------------CCTCTTTAGAGAGGGGT--GCCG s panTro5.chr20 66439458 62 + 66533130 TGGCCACAGAG------AATGCCAACTTCTGTGCTTTGGACTTGGGA------------------CCTCTTTAGAGAGGGGT--GCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114598 62 + 62195757 TGGCCACAGAG------AATGCCAACTTCTGTGCTTTGGACTTGGGA------------------CCTCTTTAGAGAGGGGT--GCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503845 64 - 578057 TGGCCACAGAG------AATGCCAACTTCTGTGCTTTGGACTTGGGA------------------CCTCTTTAGAGAGGGGTACACCG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756622 62 - 92844088 TGGACACAGCG------AATGCCAACTTCTGTGCTTTGGACTTGGGC------------------CCTCTTTAGAGAGGGGT--ACTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96423994 62 + 96509753 TGGACACAGCG------AATGCCAACTTCTGTGCTTTGGACTTGGGC------------------CCTCTTTAGAGAGGGGT--ACTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895302 62 - 16982598 TGGACACAGCG------AATACCAACTTCTGTGCTTTGGACTTGGGC------------------CCTCTTTAGAGAGGGGT--ACTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697619 62 - 3785965 TGGACACAGCG------AATGCCAACTTCTGTGCTTTGGACTTGGGC------------------CCTCTTTAGAGAGGGGT--ACTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276806 62 - 90373283 TGGGCACAGTG------AATGCCAACTTCTGTGCTTTGGACTTGGGC------------------CCTCTTTAGAGAGGGGT--ACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81424 62 - 179258 TGGACACAGCG------AATGCCAACTTCTGTGCTTTGGACTTGGGC------------------CCTCTTTAGAGAGGGGT--ACTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567144 62 - 5823884 TGGACACAGTG------AATGCCAACTTCTGTGCTTTGGACTTGGGC------------------CCTCTTTGGAGAGGGGT--CCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47608 61 + 372756 TGGCCACAGAG------AAGGCCAACTTTTGTGCCTTGGGCGTGGGT------------------CCTCTGTAGAGA-GGGT--GCTG i calJac3.chrUn_GL286459 I 485 C 0 s saiBol1.JH378156 16284221 68 + 16356641 TGGCCGCAGAGAAGGCCAAGGCCAACGTTTGTGCCTTGGGTGTGGGC------------------CCTCTGTAGAGAGGGGT--GCTG i saiBol1.JH378156 I 79 C 0 s cebCap1.NW_016107870v1 1153490 62 + 1231380 TGGACACAGAG------AAAGCCAACTTTTGTGCCTTGGGCGTGAGT------------------CCTCTGTAGAGAGGGGT--GCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2685850 62 + 11732439 TGGCCACAGAG------AAGGCCAACTTTTGTGCCTTGGGCATGAGC------------------CCTCTGTAGCGAGGGCT--GCTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22847313 80 + 22939663 CACTTATGGGC------AATTCCAACTTTTGTACTTTTGACTTGGGCCAGACTCAAGCACTGAGTCCCTTGTGGAGAGGAGT--GCTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794415 52 + 182113224 TGAACATGAAG------AAATTCAAACTCTGTGCTCTGGACTTGGGT------------------C------AGACAGGCCA------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47609644 60 + 47698779 CGGCCGT-GAG------AAGCCCAGGTTTC-TGCTTTGCCCTTGGGC------------------CAGCCTCAGGAGCTGGT--TCTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 245779 53 - 397369 TGACCCCGGGG------ACCCTCAGCTGTTACGCCCTGGACTTGGGG------------------CCGC---------GACT--GCCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e micMur3.chr18 56864540 104 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=301030.000000 s hg38.chr20_KI270870v1_alt 113294 28 + 183433 TGTTCAGGGCACCTCAGAG-CGTCTCGTG s panTro5.chr20 66439520 28 + 66533130 TGTTCAGGGCACCTCAGAG-TGTCTCGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114660 28 + 62195757 TGTTCAGGGCACCTCAGAG-TGTCTCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503909 28 - 578057 TGTTCAGGGCACCTCAGAG-TGTCTCGTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756684 28 - 92844088 TGTTCAGGGCACCTCAGAG-TATCTTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424056 28 + 96509753 TGTTCAGGGCACCTCAGAG-TATCTTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895364 28 - 16982598 TGTTCAGGGCACCTCAGAG-TATCTTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697681 28 - 3785965 TGTTCAGGGCACCTCAGAG-TATCTTGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276868 28 - 90373283 TGTTCAGGGCACCTCAGAG-TATCTTGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81486 28 - 179258 TGTTCAGGGCACCTCAGAG-TATCTTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567206 28 - 5823884 TGTTCAGGGCACCTCAGAG-TGTCTCGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47669 28 + 372756 TGTTCGAGGCCCCTCAGAA-TGTTTTGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284289 28 + 16356641 TGTTCAAGGCCCCTCAGAA-TGTCTTGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153552 28 + 1231380 TGTTCAAGGCCCCTCAGAA-TGTCTTGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2685912 28 + 11732439 TGTTCAAGGCCCCTCAGAA-TGTCTTGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56864644 28 + 57149010 TGTTCAGGGCACCTCAGAG-CGTCTTGTG i micMur3.chr18 I 104 I 125 s otoGar3.GL873542 22847393 28 + 22939663 TGTTCAGGACATTTTAGAG-GGTCTTGTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794467 26 + 182113224 ---TGAGACCCCCTTAGAGATGGTACTTG i mm10.chr2 C 0 I 3 s canFam3.chr24 47609704 23 + 47698779 -----GGGGCTCCACAGAG-GGTCCTGTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 245832 21 - 397369 TGGGAAGTGCCTGCCGGGG-GG------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=799817.000000 s hg38.chr20_KI270870v1_alt 113322 112 + 183433 TCCAAGC-TCCTGGAAACCTGGTGGCAGCTAGTGGAATGCCT-GCCGT-----------------------GGGGAGCGGTCTGGGAGACTCTGGCGCTAGAAGTCTTGCTCTTATGTATACACAGTCTTTAATTGA s panTro5.chr20 66439548 112 + 66533130 TCCAAGC-TCCTGGAAACCTGGTGGCAGCTAGTGGAATGCCT-GCCGT-----------------------AGGGAGCGGTCTGGGAGACTCTGGCGCTAGAAGTCTTGCTCTTATGTATACACAGTCTTTAATTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114688 112 + 62195757 TCCAAGC-TCCTGGAAACCTGGTGGCAGCTAGTGGAATGCCT-GCCGT-----------------------AGGGAGCGGTCTGGGAGACTCTGGCGCTAGAAGTCTTGCTCTTATGTATACACAGTCTTTAATTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 503937 112 - 578057 TCCAAGC-TCCTGGAAACCTGGTGGCAGCTAGTGGAATGCCT-GCCGT-----------------------AGGGAGCGGTCTGGGAGACTCTGGCGCTAGAAGTCTTGCTCTTATATATACACAGTCTTTAATTGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756712 112 - 92844088 TCCAAGC-TCCTGGAAACCGGGTGGCAGCTGGTGGAATGCCT-GCCGT-----------------------AGGGAGCGGTCTGGGAGACTCTGGTGTTGGAAGTCTTGCTCTTACGTATAAACAGTCTTTAATGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424084 112 + 96509753 TCCAAGC-TCCTGGAAACCGGGTGGCAGCTGGTGGAATGCCT-GCCGT-----------------------AGGGAGCGGTCTGGGAGACTCTGGTGTTGGAAGTCTTGCTCTTACGTATAAACAGTCTTTAATGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895392 112 - 16982598 TCCAAGC-TCCTGGAAACCGGGTGGCAGCTGGTGGAATGCCT-GCCGT-----------------------AGGGAGCGGTCTGGGAGACTCTGGTGTTGGAAGTCTTGCTCTTACGTATAAACAGTCTTTAATGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697709 112 - 3785965 TCCAAGC-TCCTGGAAACCTGGTGGCAGCTGGTGGAATGCCT-GCCGT-----------------------AGGGAGCCGTCTAGGAGACTCTGGTGTTGGAAGTCTTGCTCTTACGTATAAACAGTCTTTAATTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90276896 112 - 90373283 TCCAAGC-TCCTGGAAACCTGGTGGCAGCTGGTGGAATGCCT-GCCGT-----------------------AGGGAGCGGTCTGGGAGACTCTGGTGTTAGAAGCCTTGCTCTTACGTATAAACAGTCTTTAACTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81514 112 - 179258 TCCAAGC-TCCTGGAAACCTGGTGGCAGCTGGTGGAATGCCT-GCCGT-----------------------AGGGAGCCGTCTGGGAGACTCTGGTGTTGGAAGTCTTGCTCTTACGTATAAACAGTCTTTAAATGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567234 111 - 5823884 TCCAAGC-TCCTGGAAACCTGGTGGCAGCTGGTGGAGTGCCT-GCCGT-----------------------GGGGAGCC-TCTGGGAGACTCTGGCGTCAGAAGTCTTGCTCCTGTGTATAAACAGTCTTTAACTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47697 100 + 372756 TCTCG---CCCTGGAACCCT-------GCAGGCGAGATGCCT-GCAG-------------------------AACAGCTGTCCCAGAGACTCTGGCCTTGGAAGTCTTGCTCTTATATACATAGA-TCTTTAACCGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284317 107 + 16356641 TCTAG---TCCTGGAACCCGGGTGGCAGCCGGTGAGATGCCT-GCAG-------------------------AGCAGCTGTCCCAGAGACTCTGGCCTTGGAAGTCTTGCGCTTATATATACAGA-TCTTTAACTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153580 107 + 1231380 TCTAG---CCCTGGAACCCTAATGGCAGCCGGTGAGATGCCC-GCGG-------------------------AGCAGCTGTCCCAGAGACTCTGGCCTTGGAAATCTTGCTCTTATATATACAGA-CCTTTAACTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2685940 106 + 11732439 TGTAG---CCCTGGAACCCTGGTGGCAGC-GGTGAGATGCCC-GCAG-------------------------AGCAGCTGTCCCAGAGACTCTGGCCTTGGAAGTCTTGCTCTTATATATACAGA-TCTTTAACTGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22847421 69 + 22939663 GCTAAGC-CCCTAGAAACTGGGCAGTAGCTGGTACAATGCCT-GCAGT------------------------GGGAGCA-CCTGGGGGATTCCAGT----------------------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794496 90 + 182113224 CTCAAGC-CCCCTAAAATCT----------GGTGAAATGTCT-GCTGT-----------------------GGAAAAATG-------AACCTACCCAGTAAATGCCTTAACCTTGTACAGA-----TCTCCAATTAA i mm10.chr2 I 3 I 2 s canFam3.chr24 47609727 128 + 47698779 TCCCAGCAGCTTGGAAGCCTGGTGGCAGTT-------TGCCT-GCAGTGGGAAAGACTTATCCACAGAAAAAAGAAGCCGTCTAGGAGCCGCTGATGTTGGAAGTCTTGATCTCATACATACAGA-TCTTTAATTAA i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 245853 69 - 397369 -----GA-CCCTGGAAACGGAGGGGTCGATCGGCAGGTGCCCAGCTGT-----------------------AGGG----------------------------GTCTTGCTGGTA-----------TCTGTAACTAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e micMur3.chr18 56864672 125 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=65787.000000 s hg38.chr20_KI270870v1_alt 113434 6 + 183433 ACACTC s panTro5.chr20 66439660 6 + 66533130 ACACTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114800 6 + 62195757 ACACTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504049 6 - 578057 ACACTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756824 6 - 92844088 ACACTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424196 6 + 96509753 ACACTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895504 6 - 16982598 ACACTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697821 6 - 3785965 ACACTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277008 6 - 90373283 ACACTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81626 6 - 179258 ACACTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567345 6 - 5823884 ACACTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47797 6 + 372756 ATCTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284424 6 + 16356641 ATATTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153687 6 + 1231380 ATACTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686046 6 + 11732439 ATACTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56864797 6 + 57149010 ACACTC i micMur3.chr18 I 125 C 0 s otoGar3.GL873542 22847490 6 + 22939663 ACATGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794588 6 + 182113224 ACATTC i mm10.chr2 I 2 C 0 s canFam3.chr24 47609857 6 + 47698779 ACACTC i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 245922 6 - 397369 ACATGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1859471 469 - 2029793 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=554909.000000 s hg38.chr20_KI270870v1_alt 113440 38 + 183433 GTAAAACTGTAATGAGCCATTTATTTATTTGAATGGGG s panTro5.chr20 66439666 38 + 66533130 ATAAAACTGTAATGAGCCATTCATTTATTTGAATGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114806 38 + 62195757 ATAAAACTGTAATGAGCCATTCATTTATTTGAATGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504055 38 - 578057 GTAAAACTGTAATGAGCCATTCATTCATTTGAATGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756830 38 - 92844088 GTAAAACTGTAACGAGCCATTCATTTATTTGAATGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424202 38 + 96509753 GTAAAACTGTAACGAGCCATTCATTTATTTGAATGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895510 38 - 16982598 GTAAAACTGTAACGAGCCATTCATTTATTTGAATGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697827 38 - 3785965 GTAAAACTGTAACGAGCCATTCATTTATTTGAATGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277014 38 - 90373283 GTAAAACTGTAACGAGCCATTCATTTATTTGAATGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81632 38 - 179258 GTAAAACTGTAACGAGCCATTCATTTATTTGAATGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567351 38 - 5823884 GTAAAACTGTAATGAGCCATTCATTTATTTGAATGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47803 37 + 372756 -TAAAACTGTAATGAGCCATGAATTTATTTGAATGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284430 38 + 16356641 GTAAAACTGTAATGAGCCATGAATTTATTTGAATGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153693 38 + 1231380 GTAAAACTGTAATGAGCCATGAATTTATTTGAATGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686052 38 + 11732439 GTAAAATTGTAATGAGGCATGACTTTGTTTGAATGAGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56864803 38 + 57149010 GTAAAACTCCAATGAGCCGTTCATTTATTTAAATGGGG i micMur3.chr18 C 0 I 143 s proCoq1.NW_012150197v1 1859940 38 - 2029793 GTAAAACTATAACGAGCCATTCATTTATTTAAATGGGG i proCoq1.NW_012150197v1 I 469 C 0 s otoGar3.GL873542 22847496 20 + 22939663 ------------------GGATGTCTGTTTAAATGGGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794594 38 + 182113224 ATAAAGTTGTAACTAGCTATTCATTTGTTTAAATGGGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47609863 38 + 47698779 ATAAAATTGTAATGAGCCATTCGTTTATTTAAATGGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 245928 38 - 397369 GCAAAACTGTAATGAGCCATTTATTTATTTAAGTGGGT i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 110026773 1385 - 110113093 I a score=124217.000000 s hg38.chr20_KI270870v1_alt 113478 9 + 183433 CGAGTTATT s panTro5.chr20 66439704 9 + 66533130 CGAGTTATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114844 9 + 62195757 CGAGTTATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504093 9 - 578057 CGAGTTATT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756868 9 - 92844088 TGAGTTATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424240 9 + 96509753 TGAGTTATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895548 9 - 16982598 TGAGTTATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697865 9 - 3785965 TGAGTTATT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277052 9 - 90373283 TGAGTTATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81670 9 - 179258 TGAGTTATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567389 9 - 5823884 TGAGTTATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47840 9 + 372756 GGAGTTATT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284468 9 + 16356641 CAAGTTATT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153731 9 + 1231380 TGAGTTGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686090 9 + 11732439 TGAGTTATT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1859978 9 - 2029793 TGAGTTATT i proCoq1.NW_012150197v1 C 0 I 58 s otoGar3.GL873542 22847516 9 + 22939663 TGAGTTATT i otoGar3.GL873542 C 0 I 5 s mm10.chr2 181794632 9 + 182113224 TGGATTATT i mm10.chr2 C 0 I 5 s canFam3.chr24 47609901 9 + 47698779 TGAGTTATT i canFam3.chr24 C 0 I 5 s dasNov3.JH569290 245966 8 - 397369 -TAGTTATT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56864841 143 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=477213.000000 s hg38.chr20_KI270870v1_alt 113487 51 + 183433 ----AATTTTCAGCAAACTGCAGGCAGCCATTCTGAGGTGAATCGTCTGGAGACA s panTro5.chr20 66439713 41 + 66533130 ----AATTTTCAGCAAACTGCAGGCAGCCATTCTG----------TTTGGAGACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114853 41 + 62195757 ----AATTTTCAGCAAACTGCAGGCAGCCATTCTG----------TTTGGAGACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504102 51 - 578057 ----AATTTTCAGCAAACTGCAGGCAGCCATTCTGAGATGAATCGTTTGGAGATA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756877 51 - 92844088 ----AATTTTCAGCAAACTGCAAGCAGCCGTTCTGAGATGAATCGTTTGGAGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424249 51 + 96509753 ----AATTTTCAGCAAACTGCAAGCAGCCGTTCTGAGATGAATCGTTTGGAGAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895557 51 - 16982598 ----AATTTTCAGCAAACTGCAAGCAGCCGTTCTGAGATGAATCGTTTGGAGAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697874 51 - 3785965 ----AATTTTCAGCAAACTGCAAGCAGCCGTTCTGAGATGAATCGTTTGGAGAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277061 51 - 90373283 ----AATTTTCAGCAAACTGCAAGCAGCCGTTCTGAGATGAATCGTTTGGAGAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81679 51 - 179258 ----AATTTTCAGCAAACTGCAAGCAGCCGTTCTGAGATGAATCGCTTGGAGAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567398 51 - 5823884 ----AATTTTCAGCAAACTGCAAGCAGCCATTCTGAGATGAATCGTTTGGAGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47849 50 + 372756 ----AAATTTCAGCAAATGGCAAGCAG-TATTCTGAGCTGAATTGTTCGGAGGTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284477 50 + 16356641 ----AAATTTCAGCAAACCGCAAGCAG-CATTTTGAGCTGAATTGTTTGGGGGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153740 50 + 1231380 ----AAATTTCAGCAAGCTGCAAGCAG-CATTCTGAGCTGAATTGTTCAGCGGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686099 50 + 11732439 ----AAATTTCGGCAAACGGGAAGCAG-CATTCTGAGCTGAATTGTTTGGAGGTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22847530 51 + 22939663 ----AACTTTTAGCTAACCACAAGCAGCTATACTGAGATGAAATGTGTAGGGACA i otoGar3.GL873542 I 5 I 3 s mm10.chr2 181794646 50 + 182113224 ----ACTTTTTAGCAAACTGACAGAGTCCATCTTAAGATGAGCCAT-TGGAGACC i mm10.chr2 I 5 I 3 s canFam3.chr24 47609915 51 + 47698779 ----AATTTTTAGCAAACTGCAAGCAGCCATTCTGAGATGCACTGTTTGGAGACA i canFam3.chr24 I 5 I 3 s dasNov3.JH569290 245974 54 - 397369 TCATTAATTTTAGCGAACTGCTCGCAGCCCCTCTGAGAGGAGTGGTGCGGGTGC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1859987 58 - 2029793 I e micMur3.chr18 56864841 143 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=301318.000000 s hg38.chr20_KI270870v1_alt 113538 25 + 183433 TTCTGCTCCCCAGGGTGAAGGTCTG s panTro5.chr20 66439754 25 + 66533130 GTCTGCTCCCCAGGGTGAAGGTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114894 25 + 62195757 GTCTGCTCCCCAGGGTGAAGGTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504153 25 - 578057 GTCTGCTCCCCAGGGTGAAGGTCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756928 25 - 92844088 GTCTGCTCCCCAGGGTGAAGGTCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424300 25 + 96509753 GTCTGCTCCCCAGGGTGAAGGTCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895608 25 - 16982598 GTCTGCTCCCCAGGGTGAAGGTCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697925 25 - 3785965 GTCTGCTCCCCAGGGTGAAGGTCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277112 25 - 90373283 GTCTGCTCCCCAGGGTGAAGGTCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81730 25 - 179258 GTCTGCTCCCCAGGGTGAAGGTCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567449 25 - 5823884 GTGTGCTCCCCAGAGTGAAGGTCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47899 25 + 372756 ATCTGCTCTCTGGGGTGAAGGTCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284527 25 + 16356641 ATTTGCTCTCTGGGGTGAAGGTCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153790 24 + 1231380 ATCTGCTCTCTGGGGTG-AGGTCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686149 25 + 11732439 ATCTGCTCTCTGGGGTGAAGGTCTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1860045 25 - 2029793 TTCTGCTCCCCAGGGTGAGGGTCTG i proCoq1.NW_012150197v1 I 58 I 49 s otoGar3.GL873542 22847584 20 + 22939663 CTCTGGT-CCCAGGGTGA----CTA i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181794699 19 + 182113224 TTTTGCTCTTTAGGGTGTG------ i mm10.chr2 I 3 C 0 s canFam3.chr24 47609969 25 + 47698779 TCCTGCTCCCCAGGGTGAGGGTCTG i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 246028 24 - 397369 -TCTGCCCCCGAGGGCGATGGCTTG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56864841 143 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=326877.000000 s hg38.chr20_KI270870v1_alt 113563 55 + 183433 CGACAGGCTCTGAGATCTGAGCCCATCGCCTGATGTGGCCTTGCCTTTTTATTTC s panTro5.chr20 66439779 55 + 66533130 CGACAGGCCCTGAGATCTGAGCCCATCGCCTGATGTGACCTTGCCTTTTTATTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114919 55 + 62195757 CGACAGGCCCTGAGATCTGAGCCCATCGCCTGATGTGGCCTTGCCTTTTTATTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504178 55 - 578057 CGACAGGCCCTGAGATCTGAGCCCATCGCCTGATGTGGCCTTGCCTTTTTATTTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92756953 55 - 92844088 CGATGGGCCCTGAGATCTGAACCCATCGCCTGATGTGACCTCGCCTTTTTCTTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424325 55 + 96509753 CGATGGGCCCTGAGATCTGAACCCATCGCCTGATGTGACCTCGCCTTTTTCTTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895633 55 - 16982598 CGATGGGCCCTGAGGTCTGAACCCATCGCCTGATGTGACCTTGCCTTTTTCTTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3697950 55 - 3785965 CGATGGGCCCTGAGGTCTGAACCCATCGCCTGATGTGACCTCGCCTTTTTCTTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277137 55 - 90373283 CGATGGGCCCTGAGGTCTGAACCCATCGCCTGATGTGACCTCGCCTTTTTCTTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81755 54 - 179258 CGAT-GGCCCTGAGGTCTGAACCCATCGCCTGATGTGACCTCGCCTTTTTCTTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567474 55 - 5823884 CGATGGGCCCTGAGGTCTGAACCCATCGCCTGATGTGACCTCGCCTTTTTCTTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47924 41 + 372756 GGATGGGCCCTGAGATCTGAACCC--------------CTTTGCCTTATTATTTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284552 41 + 16356641 GGATGGGCCCTGAGATCTGAACCC--------------CATTGCCTTATTATCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153814 41 + 1231380 GGATGGGCCCTGAGATCTGAACCC--------------CATCGCTTTATTATTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686174 39 + 11732439 GGATGGGCCC-GAGATCTGAACCC--------------CATTGCCTTGTTATTT- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22847604 50 + 22939663 GGGTGGGCCC-GAAATCCAACCTTGCTGCCC-AGATGACCTCTCCTGCTTGT--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794718 40 + 182113224 -------ACCCAGGTTCTGA------TGCCTAAGGTGCTCTCTCCTGCTTTTT-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47609994 44 + 47698779 GGGTGGGC----------GGGTCCTTCTCCCGA-GTGACCCCTGCTGCTTGTCTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 246052 30 - 397369 --GGGGGCCC-------------------CCGTGCTGACGTCTCCTCCTCC---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860070 49 - 2029793 I e micMur3.chr18 56864841 143 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=63764.000000 s hg38.chr20_KI270870v1_alt 113618 4 + 183433 CCCT s panTro5.chr20 66439834 4 + 66533130 CCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114974 4 + 62195757 CCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504233 4 - 578057 CCCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757008 4 - 92844088 CCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424380 4 + 96509753 CCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895688 4 - 16982598 CCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698005 4 - 3785965 CCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277192 4 - 90373283 CCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81809 4 - 179258 CCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567529 4 - 5823884 CCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47965 4 + 372756 CCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284593 4 + 16356641 CCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153855 4 + 1231380 CCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686213 4 + 11732439 CCCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1860119 4 - 2029793 CCCC i proCoq1.NW_012150197v1 I 49 C 0 s otoGar3.GL873542 22847654 4 + 22939663 CCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794758 3 + 182113224 -CCT i mm10.chr2 C 0 I 1 s canFam3.chr24 47610038 4 + 47698779 CCCC i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 246082 4 - 397369 CCCG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56864841 143 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=1324234.000000 s hg38.chr20_KI270870v1_alt 113622 74 + 183433 CAGCTGCCCCACCCCAGGATGCACAGGCTCAGGGCACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- s panTro5.chr20 66439838 74 + 66533130 CAGCTGCCCCACCCCAGGATGCACGGGCTCAGGGCACATCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62114978 74 + 62195757 CAGCTGCCCCACCCCAGGATGCACGGGCTCAGGGCACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504237 74 - 578057 CAGCTGCCCCACCCCAGGATGCACGGGCTCAGGGCACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757012 74 - 92844088 CAGCTGCCCCACCCCGGGATGCACTGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424384 74 + 96509753 CAGCTGCCCCACCCCGGGATGCACTGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895692 74 - 16982598 CAGCTGCCCCACCCCGGGATGCACTGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698009 74 - 3785965 CAGCTGCCCCACCCCGGGATGCACTGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277196 74 - 90373283 CAGCTGCCCCACCCCGGGATGCACTGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81813 74 - 179258 CAGCTGCCCCACCCCGGGATGCACTGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567533 74 - 5823884 CAGCTGCCCCACCCCAGGATGCACTGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTGAG--------AGG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 47969 74 + 372756 CAGCTGTCCCACCCCTGGATGCACTGGCTCAGGACATGTCCGGGGCAAGTACTCCAGACACCGAAGGTAAG--------AGG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284597 74 + 16356641 CAGCTGCCCCACCCCAGGATGCACTGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------GGG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153859 74 + 1231380 CAGCTGCCCCACCCCAGGATGCACTGGCTCGGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686217 74 + 11732439 CAGCTGTCCCACCCCAGGATGCACCGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------GGG- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56864984 74 + 57149010 CAGCTGCCCCACCCCGGGATGCACAGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i micMur3.chr18 I 143 C 0 s proCoq1.NW_012150197v1 1860123 74 - 2029793 CAGCTGCCCCACCCCAGGATGCTCAGGCTCAGGACACGTCCGGGGCAAGTACTCCAGGCACCGAAGGTAAG--------AGG- i proCoq1.NW_012150197v1 C 0 I 649 s otoGar3.GL873542 22847658 74 + 22939663 CAGCTGCCCCACCCCAGGATGCACAGGCTCAGGACACGTCCGGGGAAAGTATTCCAGGCATCGGAGGTAAG--------AGT- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794762 74 + 182113224 CAGTTGTCCTACCCCAGGATGTACTGGTTCAGGACATGTGCGGGGCAAGTACTCCAGACATCGAAGGTATG--------AGG- i mm10.chr2 I 1 C 0 s canFam3.chr24 47610045 74 + 47698779 CAGCTGCCCCACCCCAGGGTGCACCGGCTCAGGACACATTCGGGGCAAGTACTCCAGGCACCGCAGGTAAG--------GAG- i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 246086 83 - 397369 CAGCTGCCCCACACCAGGGTGCACCGGCTCCGGACACGTGCGGGGGAAGTACTCCCGGCACCGAAGGTAAGGCTCTGGAAGGG i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 110026773 1385 - 110113093 I a score=98199.000000 s hg38.chr20_KI270870v1_alt 113696 13 + 183433 ACCCTTGGAT-CTC--- s panTro5.chr20 66439912 13 + 66533130 ACCCTTGGAT-CTC--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115052 13 + 62195757 ACCCTTGGAT-CTC--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504311 13 - 578057 ACCCTTGGAT-CTC--- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757086 13 - 92844088 ACGCTTGGAT-CTC--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424458 13 + 96509753 ACGCTTGGAT-CTC--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895766 13 - 16982598 ACCCTTGGAT-CTC--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698083 13 - 3785965 ACCCTTGGAT-CTC--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277270 13 - 90373283 ACCCTTGGAT-CTC--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81887 13 - 179258 ACCCTTGGAT-CTC--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567607 13 - 5823884 ACCCTTGGAT-CTC--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48043 13 + 372756 ACTCTGGGGT-GTC--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284671 13 + 16356641 ACCCTGGGGT-CTC--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153933 13 + 1231380 ACCCTGGGGT-CTC--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686291 13 + 11732439 ACCCCGGGGT-CTC--- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56865058 13 + 57149010 CCCCTCGGCT-CTC--- i micMur3.chr18 C 0 I 1969 s otoGar3.GL873542 22847732 12 + 22939663 -CCCTTAGCT-CTT--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794836 13 + 182113224 -CCTGCCAATACTC--- i mm10.chr2 C 0 I 1 s canFam3.chr24 47610119 9 + 47698779 GTTCCTGGG-------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 246169 9 - 397369 -------GGT-CTCGGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=12376.000000 s hg38.chr20_KI270870v1_alt 113709 1 + 183433 A s panTro5.chr20 66439925 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115065 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504324 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757099 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424471 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895779 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698096 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277283 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81900 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567620 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48056 1 + 372756 A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284684 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1153946 1 + 1231380 A i cebCap1.NW_016107870v1 C 0 I 197 s aotNan1.NW_018500483v1 2686304 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47610128 1 + 47698779 A i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 246178 1 - 397369 A i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e mm10.chr2 181794849 1 + 182113224 I e micMur3.chr18 56865071 1969 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I e otoGar3.GL873542 22847744 0 + 22939663 C a score=199127.000000 s hg38.chr20_KI270870v1_alt 113710 30 + 183433 CGGAGATTCCTGGGCGGTAGA--TTTGGAG------CC s panTro5.chr20 66439926 30 + 66533130 CGGAGATTCCTGGGCAGTAGA--TTTGGAG------CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115066 30 + 62195757 CGGAGATTCCTGGGCAGTAGA--TTTGGAG------CC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504325 30 - 578057 CGGAGATTCCTGGGCAGTAGA--TTTGGAG------CC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757100 35 - 92844088 CAGAGCTTCCTGGGAAGCAGA--TTTGGAG-GCCCCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424472 35 + 96509753 CAGAGCTTCCTGGGAAGCAGA--TTTGGAG-GCCCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895780 35 - 16982598 CAGAGCTTCCTGGGAAGCAGA--TTTGGAG-GCCCCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698097 35 - 3785965 CAGAGCTTCCTGGGAAGCAGA--TTTGGAG-GCCCCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277284 35 - 90373283 CAGAGCTTCCTGGGAAGCAGA--TTTGGAG-GCCCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81901 35 - 179258 CAGAGCTTCCTGGGAAGCAGA--TTTGGAG-GCCCCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567621 36 - 5823884 CAGAGCTTCCTGGGAAGCAGA--TTTGGAGCCCCCCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48057 29 + 372756 CAGAGGTTCCTGGG-AGTAGA--TTTGGAG------CC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284685 28 + 16356641 CAGAGGTTCCT-GG-AGTAGA--TTTGGAG------CC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2686305 29 + 11732439 CAGAGGTTCCCGGG-AGTAGA--TCTGGAG------CC i aotNan1.NW_018500483v1 C 0 I 146 s otoGar3.GL873542 22847744 30 + 22939663 CAGAGTTACCTTCGAGGGAGG--TTTGGAG------CC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794850 30 + 182113224 TAAAGACTCCCAGGAAGGAGG--TTTGGGG------TT i mm10.chr2 I 1 I 1 s canFam3.chr24 47610129 29 + 47698779 GGGAGG---CTGGGCTGCGGGGTGTTGGAG------AC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 246179 22 - 397369 CGGGG---CCTGGCCC-------TCTGAAG------CC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e micMur3.chr18 56865071 1969 + 57149010 I e cebCap1.NW_016107870v1 1153947 197 + 1231380 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=427112.000000 s hg38.chr20_KI270870v1_alt 113740 69 + 183433 CCTG--CCCACTC--------------------TGCAGATGGAGAACTTTCCATCTTTTTCCATGGCTCCCAAGGC-------------------CA----GGCTG--CTGACCCT s panTro5.chr20 66439956 69 + 66533130 CCTG--CCCACTC--------------------TGCAGATGGAGAACTTTCCATCTTTTTCCATGGCTCCCAAGGC-------------------CA----GGCTG--CTGACCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115096 69 + 62195757 CCTG--CCCACTC--------------------TGCAGATGGAGAACTTTCCATCTTTTTCCATGGCTCCCAAGGC-------------------CA----GGCTG--CTGACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504355 84 - 578057 CCTG--CCCACTC-----TGCTCTAGGCCCTTTTGCAGATGGAGAACTTTCCATCTTTTTCCATGGCTCCCAAGGC-------------------CA----GGCTG--CTGACCCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757135 89 - 92844088 ACCG--CCCGCCCAACTCTGTTCTAGGCCCTTTTGCAGATGGAGAACTTTCCATCTTTTTCCACGGCTCCTGAGGC-------------------CA----GGCTG--CTGACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424507 89 + 96509753 ACCG--CCCGCCCAACTCTGTTCTAGGCCCTTTTGCAGATGGAGAACTTTCCATCTTTTTCCACGGCTCCTGAGGC-------------------CG----GGCTG--CTGACCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895815 89 - 16982598 ACCG--CCCGCCCAACTCTGTTCTAGGCCCTTTTGCAGATGGAGAACTTTCCATCTTTTTCCACGGCTCCTGAGGC-------------------CA----GGCTG--CTGACCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698132 89 - 3785965 ACCG--CCCGCCCAACTCTGTTCTAGGCCCTTTTGCAGATGGAGAACTTTCCATCTTTTTCCACGGCTCCTGAGGC-------------------CA----GGCTG--CTGACCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277319 89 - 90373283 ACTG--CCCGCCCAACTCTGTTCTAGGCCCTTTTGCAGATGGAGAACTTTCCATCTTTTTCCACGGCTCCTGAGGC-------------------CA----GGCTG--CTGACCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 81936 89 - 179258 ACCG--CCCGCCCAACTCTGTTCTAGGCCCTTTTGCAGATGGAGAACTTTCCATCTTTTTCCACGGCTCCTGAGGC-------------------CA----GGCTG--CTGACCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567657 91 - 5823884 ACCGCCCCCGCCCAACTCTGTTCTAGGCCCTTTTGCAGATGGAGAACTTTCCATCTTTTTCCACGGCTCCTGAGGC-------------------CA----GGCTG--CTGGCCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48086 79 + 372756 --------TTCCC----CTGCTCTAGGCCCTTTTGCGGATAGAGAACCTTCCATCTTTGTCCACAGCTGACGAGGA-------------------CA----GGCTG--CTGCCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284713 79 + 16356641 --------TTCCC----CTGCTCTAGGCCCTTTTGCAGATAGAGAACCTTCCGTCTTTGTCCACAGCTGATGAGGA-------------------CA----GGCTG--CTGCCCCT i saiBol1.JH378156 C 0 I 3 s otoGar3.GL873542 22847774 81 + 22939663 ----------CCC---TCTGCACTGAACCCTTTCATGGATTAAAAACCTTTCATCTCTGTCCTAAGCT-CTGAGGT-------------------CAGCGTGGCTG--TGGGCCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181794881 80 + 182113224 ------TCTTCTCAGATATGTTTT-----CTTTTGTGGATTAAAACCTTTC--TGTTTGACTATGACTGCTGAGGC-------------------CA----AGCTGGCCTATCCCT i mm10.chr2 I 1 C 0 s canFam3.chr24 47610158 99 + 47698779 -------CCTCTC----CTTCTCCGGGCCCTACTGTAGCTCTAGAACCTTCCATCTCTGCCTGTGGCTGCTGAAGCTAACATGGCCCTGGCGTGTCA----TGCCG--CGGTCTCT i canFam3.chr24 C 0 I 27 s dasNov3.JH569290 246201 17 - 397369 ----------------------------------------------------------CCCGATGGCGCCCACAA----------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e micMur3.chr18 56865071 1969 + 57149010 I e cebCap1.NW_016107870v1 1153947 197 + 1231380 I e aotNan1.NW_018500483v1 2686334 146 + 11732439 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=19706.000000 s hg38.chr20_KI270870v1_alt 113809 3 + 183433 TCT s panTro5.chr20 66440025 3 + 66533130 TCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115165 3 + 62195757 TCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504439 3 - 578057 CCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757224 3 - 92844088 TCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424596 3 + 96509753 TCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895904 3 - 16982598 TCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698221 3 - 3785965 TCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277408 3 - 90373283 TCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82025 3 - 179258 TCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567748 3 - 5823884 TCT i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22847855 2 + 22939663 -CT i otoGar3.GL873542 C 0 I 11 s mm10.chr2 181794961 3 + 182113224 TCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47610284 3 + 47698779 TCC i canFam3.chr24 I 27 I 16 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e micMur3.chr18 56865071 1969 + 57149010 I e dasNov3.JH569290 246218 0 - 397369 C e saiBol1.JH378156 16284792 3 + 16356641 I e cebCap1.NW_016107870v1 1153947 197 + 1231380 I e calJac3.chrUn_GL286459 48165 0 + 372756 C e aotNan1.NW_018500483v1 2686334 146 + 11732439 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=-141578.000000 s hg38.chr20_KI270870v1_alt 113812 48 + 183433 --------------GCGAGGC--AGCGAC----------------------CTCCCACT-------------------CTAGCGTGGAGATCT--------------------GTGTGGCCATGG s panTro5.chr20 66440028 48 + 66533130 --------------GCGAGGC--AGCGAC----------------------CTCCCACT-------------------CTAGCGTGGAGATCT--------------------GTGTGGCCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115168 48 + 62195757 --------------GCGAGGC--AGCGAC----------------------CTCCCACT-------------------CTAGCGTGGAGATCT--------------------GTGTGGCCATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504442 11 - 578057 --------------GCGAGGC--AGCG-------------------------------------------------------------------------------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757227 10 - 92844088 --------------GCGAGGC--AGC--------------------------------------------------------------------------------------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424599 10 + 96509753 --------------GCGAGGC--AGC--------------------------------------------------------------------------------------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895907 10 - 16982598 --------------GCGAGGC--AGC--------------------------------------------------------------------------------------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698224 10 - 3785965 --------------GCGAGGC--AGT--------------------------------------------------------------------------------------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277411 10 - 90373283 --------------GCAGGGC--AGC--------------------------------------------------------------------------------------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82028 10 - 179258 --------------GCGAGGC--AGC--------------------------------------------------------------------------------------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567751 10 - 5823884 --------------GCAAGGC--AGC--------------------------------------------------------------------------------------------------- i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16284795 48 + 16356641 --------------GCGAGGC--AGCATC----------------------CTCCCACT-------------------CCAGCGTGGAGGCCA--------------------GGGTGGCCGTGG i saiBol1.JH378156 I 3 C 0 s otoGar3.GL873542 22847868 68 + 22939663 --------------GCTAGAC--TGCCTG----------------------TCCCCAGC-------------------TCTGCATTGTGGTTTCCTGTTGGGGAGACTGCCAGGGCTAGCTGACG i otoGar3.GL873542 I 11 C 0 s mm10.chr2 181794964 38 + 182113224 ----------------AAGGCCTAGTGTC----------------------TTCCCACTGGTCTGT-----------GTTCCTGTGG-------------------------------------- i mm10.chr2 C 0 I 563 s canFam3.chr24 47610303 109 + 47698779 --------------GCAGACC--TGCCACACGTTGAGGTGACCCAGATGAGCTGCCACCTGGCTGTCACTGCTGTCATCCTGGGCGGGGGGCGGCCAGCTTGAGTGCAGGTGTGTGAGGGTGTGC i canFam3.chr24 I 16 I 3 s dasNov3.JH569290 246218 20 - 397369 GTGCAGCCCTGTGCTCGTGG--------------------------------------------------------------------------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e micMur3.chr18 56865071 1969 + 57149010 I e cebCap1.NW_016107870v1 1153947 197 + 1231380 I e calJac3.chrUn_GL286459 48165 0 + 372756 C e aotNan1.NW_018500483v1 2686334 146 + 11732439 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=3820.000000 s hg38.chr20_KI270870v1_alt 113860 35 + 183433 --GCGTGCCA-------TGTGGGGGAAGACA----GACCATCTGACCT s panTro5.chr20 66440076 35 + 66533130 --GCGTGCCA-------TGTGGGGGAAGACA----GACCATCTGACCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115216 35 + 62195757 --GCGTGCCA-------TGTGGGGGAAGACA----GACCATCTGACCT i panPan2.chr20 C 0 C 0 s saiBol1.JH378156 16284843 35 + 16356641 --GCATGCCA-------CGTGGGAGCAGACA----GATTATTGGTCCT i saiBol1.JH378156 C 0 T 86 s otoGar3.GL873542 22847936 46 + 22939663 --GCGGCTCAGAGCAGGTGTGGTGCACGCCAGTGTGACTGCGTGAGCT i otoGar3.GL873542 C 0 I 26 s canFam3.chr24 47610415 31 + 47698779 ------GCCT-------GGAGGTGCAGGAGG----GAGGGCCGGGGCA i canFam3.chr24 I 3 I 9 s dasNov3.JH569290 246238 16 - 397369 GAGCGCCCGC-------TGTGGG------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e cerAty1.NW_012001373v1 3698234 0 - 3785965 C e colAng1.NW_012114444v1 5567761 0 - 5823884 C e chlSab2.chr2 90277421 0 - 90373283 C e mm10.chr2 181795002 563 + 182113224 I e micMur3.chr18 56865071 1969 + 57149010 I e gorGor5.CYUI01015848v1 504453 0 - 578057 C e manLeu1.NW_012101652v1 82038 0 - 179258 C e macNem1.NW_012014244v1 16895917 0 - 16982598 C e cebCap1.NW_016107870v1 1153947 197 + 1231380 I e calJac3.chrUn_GL286459 48165 0 + 372756 C e aotNan1.NW_018500483v1 2686334 146 + 11732439 I e nomLeu3.chr13 110026773 1385 - 110113093 I e rheMac8.chr10 92757237 0 - 92844088 C e macFas5.chr10 96424609 0 + 96509753 C a score=250005.000000 s hg38.chr20_KI270870v1_alt 113895 92 + 183433 CCCGCGAGG----------------CAGC-GACT---------TCCCA------CTCTAGCAT----GGAGGTCCGTGTG-GCCATGGGCGT-------------------GCCATGT-GGGCGAAGA------------CAGA----CCA---------------------TCTGAC------------------------------------------------------------CCCCTAGT s panTro5.chr20 66440111 92 + 66533130 CCCGCGAGG----------------CAGC-GACT---------TCCCA------CTCTAGCAT----GGAGGTCCGTGTG-GCCATGGGTGT-------------------GCCATGT-GGGCAAAGA------------CAGA----CCA---------------------TCTGGC------------------------------------------------------------CCCCCAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115251 92 + 62195757 CCCGCGAGG----------------CAGC-GACT---------TCCCA------CTCTAGCAT----GGAGGTCCGTGTG-GCCATGGGCGT-------------------GCCATGT-GGGCAAAGA------------CAGA----CCA---------------------TCTGAC------------------------------------------------------------CCCCCAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504453 79 - 578057 ------------------------------GGCC---------TCCCA------CTCTAGCAT----GGAGGTCCGGGTG-GCCACGGGCGT-------------------GCCATGT-GGGCGAAGA------------CAGA----CCA---------------------TCTGAC------------------------------------------------------------CCCCCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757237 79 - 92844088 ------------------------------GACC---------TCCCA------CTCTAGCCT----GGAGGCCCGTGTG-GCCATGGGCAC-------------------ACCCTGT-GGGGAAAGA------------CAGA----CCA---------------------TCTGAC------------------------------------------------------------TTCCCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424609 79 + 96509753 ------------------------------GACC---------TCCCA------CTCTAGCCT----GGAGGCCCGTGTG-GCCATGGGCAC-------------------GCCCTGT-GGGGAAAGA------------CAGA----CCA---------------------TCTGAC------------------------------------------------------------TTCCCAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895917 79 - 16982598 ------------------------------GACC---------TCCCA------CTCTAGCCT----GGAGGCCCCTGTG-GCCATGGGCAC-------------------GCCCTGT-GGGGAAAGA------------CAGA----CCA---------------------TCTGAC------------------------------------------------------------TTCCCAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698234 79 - 3785965 ------------------------------GACC---------TCCCA------CTCTAGCCT----GGAGGCCCGTGTG-GCCATGGGCAT-------------------GCCCTGT-GGGGAAAGA------------CAGA----CCA---------------------TCTGAC------------------------------------------------------------TTCCCAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277421 79 - 90373283 ------------------------------GACC---------TCCCA------CTCTAGCCT----GGAGGCCCGTGTG-GCCATGGGCAC-------------------GCCCTGT-GGGGAAAGA------------CAGA----CCA---------------------CCTGAC------------------------------------------------------------CTCCCAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82038 79 - 179258 ------------------------------GACC---------TCCCA------CTCTAGCCT----GGAGGCCCGTGTG-GCCATGGGCAT-------------------GCCCTGT-GGGGAAAGA------------CAGA----CCA---------------------TCTGAC------------------------------------------------------------TTCCCAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567761 80 - 5823884 ------------------------------GACC---------TCCCA------CTCTAGCCT----GGAGGCCCGTGTG-GCCGTGGGCAC-------------------GCCCTGTGGGGGAAAGA------------TAGA----CCA---------------------TCTGAC------------------------------------------------------------CTACCAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48165 91 + 372756 CCTGCGAGG----------------TGGC-ATCC---------TCTCA------CTCTGGCAT----GGAGGCCAGGGTG-GCTGTGGGCAC-------------------GCCACGT-GGGGGCAGA------------CAGA----TTA---------------------CCGGTC------------------------------------------------------------CTCCCAC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284792 91 + 16356641 CCTGCGAGG----------------CAGC-ATCC---------TCCCA------CTCCAGCGT----GGAGGCCAGGGTG-GCCGTGGGCAT-------------------GCCACGT-GGGAGCAGA------------CAGA----TTA---------------------TTGGTC------------------------------------------------------------CTCCCAC- i saiBol1.JH378156 T 86 C 0 s otoGar3.GL873542 22848008 217 + 22939663 CCCGGGAAGTT--AGCTG--GATCTCAGG-TGCC---------TCCCACAGCAGCTCCAGTTTC--AGAGGGTCGGTGTGAGCAGTGGGGGTCTGGAGGTGGAGGAGGAAGGACATCA-GAGGGAGGAATGGCTGCAGATCAGA----CCAGGCTGTGTGTAAGATGCTGGGTCTGAAG--GATGGC------TTGGCAGGGATGGCCTGGGCCAGTGGGCCCTGGAAGGGCAGGGAGCCCTCACT i otoGar3.GL873542 I 26 I 2 s canFam3.chr24 47610455 177 + 47698779 CCTGCTTGGCGGAGGCCGCAGGCTGCGGCTGACCCAGGGCCAGTCCCA------TCCTCTTCCCGAGGGGGGAGCGTGTG-GACAGGGCCAC-TGAGGTTGG---------GTCTTAC-GAGAGAGGA------------AGGAAATGCAA---------------------TTTAAAGCACATCGCAAGTTTTTAATATGGACAATTCATGTAAAATTG------------------TCACCACC i canFam3.chr24 I 9 I 5 s dasNov3.JH569290 246254 53 - 397369 -----------------------GGCAGC-AACC---------CCTAA------CT-----------GCAGGTGTGGCTG-GCCCAGGGCGC-------TAG---------AGCGTGT-GG----------------------------------------------------------------------------------------------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e mm10.chr2 181795002 563 + 182113224 I e micMur3.chr18 56865071 1969 + 57149010 I e cebCap1.NW_016107870v1 1153947 197 + 1231380 I e aotNan1.NW_018500483v1 2686334 146 + 11732439 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=5757.000000 s hg38.chr20_KI270870v1_alt 113987 1 + 183433 G s panTro5.chr20 66440203 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115343 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504532 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757316 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424688 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895996 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698313 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277500 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82117 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567841 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48256 1 + 372756 A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284883 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154144 1 + 1231380 G i cebCap1.NW_016107870v1 I 197 C 0 s otoGar3.GL873542 22848227 1 + 22939663 G i otoGar3.GL873542 I 2 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e canFam3.chr24 47610632 5 + 47698779 I e mm10.chr2 181795002 563 + 182113224 I e micMur3.chr18 56865071 1969 + 57149010 I e dasNov3.JH569290 246307 0 - 397369 C e aotNan1.NW_018500483v1 2686334 146 + 11732439 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=150132.000000 s hg38.chr20_KI270870v1_alt 113988 21 + 183433 CTGC---------ACTTTGCTTTTTTTGTC s panTro5.chr20 66440204 21 + 66533130 CTGC---------GCTTTGCTTTTTTTGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115344 21 + 62195757 CTGC---------GCTTTGCTTTTTTTGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504533 21 - 578057 CTGC---------ACTTTGCTTTTTTTGTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757317 21 - 92844088 CTGC---------ACTGTGGTTTTCTTGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424689 21 + 96509753 CTGC---------ACTGTGGTTTTCTTGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16895997 21 - 16982598 CTGC---------ACTGTGGTTTTCTTGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698314 21 - 3785965 CTGC---------ACTGTGGTTTTCTTGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277501 21 - 90373283 CTGC---------ACTGTGGTTTTCTTGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82118 21 - 179258 CTGC---------ACTGTGGTTTTCTTGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567842 21 - 5823884 CTGC---------ACTGTGGTTTTCTTGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48257 21 + 372756 CTAC---------ACTTGGGCTTTTCTGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284884 21 + 16356641 CCGC---------ACTTTGGCTTTCCTGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154145 21 + 1231380 CTGC---------ACTTTAGTGTTTCTGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686480 21 + 11732439 CTGC---------ACTTTGGTTTTTCTGTG i aotNan1.NW_018500483v1 I 146 C 0 s otoGar3.GL873542 22848228 21 + 22939663 CTGC---------AGTTAGGTCTTCTTGTT i otoGar3.GL873542 C 0 I 115 s canFam3.chr24 47610637 30 + 47698779 CTGCCCCATGTGAGCTTGGGGCATCTAGTG i canFam3.chr24 I 5 I 20 s dasNov3.JH569290 246307 6 - 397369 ---------------------TTTCTC--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e mm10.chr2 181795002 563 + 182113224 I e micMur3.chr18 56865071 1969 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=285857.000000 s hg38.chr20_KI270870v1_alt 114009 38 + 183433 -CGGGTTCCCTGCAAGGACTGGATGA-G--TCTGTGGGGAAG s panTro5.chr20 66440225 38 + 66533130 -CGGGTTCCCTGCAAGGACTGGATGA-G--TCTGTGGGGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115365 38 + 62195757 -CGGGTTCCCTGCAAGGACTGGATGA-G--TCTGTGGGGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504554 38 - 578057 -CGGGTCCCCTGCAAGGACTGGATGA-G--TCTGTGGGGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757338 38 - 92844088 -TGGGTCCCCTGCAAGAACTGGATGA-G--TCTGTGGGGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424710 38 + 96509753 -TGGGTCCCCTGCAAGAACTGGATGA-G--TCTGTGGGGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896018 38 - 16982598 -TGGGTCCCCTGCAAGAACTGGATGA-G--TCTGTGGGGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698335 38 - 3785965 -TGGGTCCCCTGCAAGAACTGGATGA-G--TCTGTGGGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277522 38 - 90373283 -TGAGTCCCCTGCAAGAACTGGATGA-G--TCTGTAGGGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82139 38 - 179258 -TGGGTCCCCTGCAAGAACTGGATGA-G--TCTGTGGGGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567863 38 - 5823884 -TGGGTCCCCGGCAAGAACTGGATGA-G--TCTGTGGGGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48278 34 + 372756 -CAGGTCCCCTGAAAGGACTGGATGA-G--TGTGTGG----A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284905 34 + 16356641 -CGGGTCCCCTGCGAGGACTGGATGA-G--TCTGTGG----A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154166 34 + 1231380 -CGGGTCCCCTGCGAGGACTAGATGA-G--TCTGTGG----A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686501 34 + 11732439 -CGGGTCCCCTGCGAGGACTGGATGA-G--TCTGTGG----A i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47610687 39 + 47698779 -CAGGCAAACTTTCAGAACCGGGTACTG--GCTGCAGAGGGT i canFam3.chr24 I 20 C 0 s dasNov3.JH569290 246313 41 - 397369 GAGAGACGCTGAGATGCAGTGAAAAA-GCACCCCTGGGAAGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1860197 649 - 2029793 I e mm10.chr2 181795002 563 + 182113224 I e micMur3.chr18 56865071 1969 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I e otoGar3.GL873542 22848249 115 + 22939663 I a score=38811.000000 s hg38.chr20_KI270870v1_alt 114047 3 + 183433 GGA s panTro5.chr20 66440263 3 + 66533130 GGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115403 3 + 62195757 GGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504592 3 - 578057 GGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757376 3 - 92844088 GGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424748 3 + 96509753 GGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896056 3 - 16982598 GGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698373 3 - 3785965 GGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277560 3 - 90373283 GGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82177 3 - 179258 GGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567901 3 - 5823884 GGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48312 3 + 372756 GGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284939 3 + 16356641 GGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154200 3 + 1231380 GGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686535 3 + 11732439 GGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1860846 3 - 2029793 GGA i proCoq1.NW_012150197v1 I 649 C 0 s canFam3.chr24 47610726 3 + 47698779 GAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 246354 3 - 397369 GGC i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181795002 563 + 182113224 I e micMur3.chr18 56865071 1969 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I e otoGar3.GL873542 22848249 115 + 22939663 I a score=13050.000000 s hg38.chr20_KI270870v1_alt 114050 1 + 183433 G s panTro5.chr20 66440266 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115406 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504595 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757379 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424751 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896059 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698376 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277563 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82180 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567904 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48315 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284942 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154203 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686538 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1860849 1 - 2029793 G i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22848364 1 + 22939663 G i otoGar3.GL873542 I 115 C 0 s canFam3.chr24 47610729 1 + 47698779 G i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 246357 1 - 397369 G i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181795002 563 + 182113224 I e micMur3.chr18 56865071 1969 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=487891.000000 s hg38.chr20_KI270870v1_alt 114051 49 + 183433 ---GGAGGGAGGACCCTCGGGAGGGGCTCATGGGGTGTCTGAGGCCTCTCGT s panTro5.chr20 66440267 49 + 66533130 ---GGAGGGAGGACCCTCGGGAGGGGCTCATGGGGTGTCTGAGGCCTCTCGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115407 49 + 62195757 ---GGAGGGAGGACCCTCGGGAGGGGCTCATGGGGTGTCTGAGGCCTCTCGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504596 49 - 578057 ---GGAGGGAGGACCCTCGGGAGGGGCTCATGGGGTGTCTGAGGCCTCTCGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92757380 49 - 92844088 ---GGAGGGAGGACCCTCGGGAGGGGCGCATGGGGTGGCTGAGGCCTCTCGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424752 49 + 96509753 ---GGAGGGAGGACCCTCGGGAGGGGCGCATGGGGTGGCTGAGGCCTCTCGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896060 49 - 16982598 ---GGAGGGAGGACCCTCGGGAGGGGCGCATGGGGTGGCTGAGGCCTCTCGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698377 49 - 3785965 ---GGAGGGAGGACCCTCGGGAGGGGCGCATGGGGTGGCTGAGGCCTCTCGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277564 49 - 90373283 ---GGAGGGAGGACCCTCGGGAGCGGCGTGGGGGGTGGCTGAGGCCTCTCGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82181 49 - 179258 ---GGAGGGAGGACCCTCGGGAGGGGCGCATGGGGTGGCTGAGGCCTCTCGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567905 49 - 5823884 ---GGAGGGAGGACCCTCGGGAGGGGCGCATGGTGTGGCTGAGGCCTCTCGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48316 49 + 372756 ---GGAGAAAGGACCCTCGGGAGGGGCTCATGGGGTGGCTGAGGCCTCTTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284943 49 + 16356641 ---GGAGAAAGGACCCTCGGGAGGGGCTCATGGGGTGGCTGAGGCCTCTCGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154204 49 + 1231380 ---GGAGAAAGGACCCTCTGGAGGGGCTCATGGGGTGGCTGAGGCCTCGCGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686539 49 + 11732439 ---GGAGAAAGGACGCTCGGGAGGGGCTCATGGGGTGGCTGAGGCCTCTCTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1860850 45 - 2029793 ---GGAGAGGGGGCCCTCGGGGGGCGCTCGCGGGGTGTCTGA-GCCTGT--- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22848365 44 + 22939663 ---TGGAGAGGGGCCTTAGGGAGGTGCT--TGGGGCATCTGAGGCCAGC--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181795565 39 + 182113224 ---GAAGGAGAGACTCTTAGAATGGCCTCCTGG-GTTTCTCAG--------- i mm10.chr2 I 563 C 0 s canFam3.chr24 47610732 34 + 47698779 ---TGGGCGGAGGCCCCCAGGGGGTGTTGACAGGGTG--------------- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 246358 44 - 397369 GCCGTGAGGGGGACGC----GGGGGGCACA---GGCGTCCG-GGTCTCACGC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56865071 1969 + 57149010 I e nomLeu3.chr13 110026773 1385 - 110113093 I a score=463859.000000 s hg38.chr20_KI270870v1_alt 114100 38 + 183433 GGCCCTAGCCTGGTCCTCTCCACTGCCTACTCCTCCCT s panTro5.chr20 66440316 38 + 66533130 GGCCCTAGCCTCGTCCTCTCCACTGCCTACTCCTCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115456 38 + 62195757 GGCCCTAGCCTCGTCCTCTCCACTGCCTACTCCTCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504645 38 - 578057 GGCCCTAGCCTGGCCCTCTCCACTGCCTACTCCTCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028158 38 - 110113093 GGCCCTAGCCTGGCCCTCTCCACTGCCTCCTCCTCCCT i nomLeu3.chr13 I 1385 C 0 s rheMac8.chr10 92757429 38 - 92844088 GGCCCTAGCCTGGCCCTCTCCACTGCCTACTCCTCCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424801 38 + 96509753 GGCCCTAGCCTGGCCCTCTCCACTGCCTACTCCTCCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896109 38 - 16982598 GGCCCTAGCCTGGCCCTCTCCACCGCCTACTCCTCCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698426 38 - 3785965 GACCCTAGCCTGGCCCTCTCCACTGCCTACTCCTCCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277613 38 - 90373283 GGCCCTAGCCTGGCCCTCTCCACTGCCTACTCCTCCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82230 38 - 179258 GGCCCTAGCCTGGCCCTCTCCACTGCCTACTCCTCCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567954 38 - 5823884 GGCCCTAGCCTGGCCCTCTCCACTGCCTACTCCTCCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48365 38 + 372756 GGCTCTAGCCTGGCCCTCTCCACTGCCTACTCCTCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16284992 37 + 16356641 GGCCCTAGCCTGGCCCTCTCCACTGCCTCCTCCT-CCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154253 38 + 1231380 GGCCCTAGCCTGGTCCTCTCCACTGCCTACTCCTCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686588 38 + 11732439 GGCCCTAGCCTGGCCCTCTCCACTGCCTACTCCTCCCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1860895 37 - 2029793 GGCCCCAGCCTGGCTC-CTCCACCGCCCCCGCCTCCCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22848409 37 + 22939663 AGGCTCCGCCTGGCTC-CTCCACCACCCACACCTCCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181795604 37 + 182113224 GGAACTGGCCTGGCTCTTGGCACCATCCA-TCTTCCCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47610766 17 + 47698779 -GCCCTGGCC--------------------CCCTTCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 246402 11 - 397369 ------AGCCCG------------------TCCTC--- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56865071 1969 + 57149010 I a score=7682178.000000 s hg38.chr20_KI270870v1_alt 114138 407 + 183433 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCACACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACACTGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGTCAGGACAGGACGAGATTCATCGCCCCGAGACAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGCGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGAGG--GGCTC-AC-TCCGGGCAA--------------GAGAAAGCCCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG s panTro5.chr20 66440354 407 + 66533130 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGTGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCACACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACACTGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGTCAGGACAGGATGAGATTCATCGCCCCGAGACAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGCGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGAGG--GGCTC-AC-TCCGGGCAA--------------GAGAAAGCCCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115494 407 + 62195757 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGTGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCACACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACACTGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGTCAGGACAGGACGAGATTCATCGCCCCGAGACAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCTG-AATAAAGGGCGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGAGG--GGCTC-AC-TCCGGGCAA--------------GAGAAAGCCCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 504683 407 - 578057 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCACACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACACTGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGTCAGGACAGGACGAGATTCATCGCCCTGAGACAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGCGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGAGG--GGCTC-AC-TCCGGGCAA--------------GAGAAAGCCCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GTTTCCTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028196 407 - 110113093 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACACCGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGTCAGGACAGGACGAGATTCATCGCCCTGAGACAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGCGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGT--GG---GGAGG--GGCTC-AC-TCTGGGCGA--------------GAGAAAGCCCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92757467 406 - 92844088 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACCCCGAGGTGAAGGACGCCTCTGTCTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGGCAGGACAGGAGGAGATTCATTGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGTGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGA-G--GGCTC-AC-TCTGAGCGA--------------GAGAAAGCTCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96424839 406 + 96509753 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACCCCGAGGTGAAGGACGCCTCTGTCTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGGCAGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGTGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGA-G--GGCTC-AC-TCTGAGCGA--------------GAGAAAGCTCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896147 406 - 16982598 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACCCCGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGGCAGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGTGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGA-G--GGCTC-AC-TCGGAGCGA--------------GAGAAAGCTCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698464 407 - 3785965 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTGTGGTGTGGACAGCGACGGCAGTGAGGACACCGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACATCAGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCTCCG-AATAAAGGGTGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGAGG--GGCTC-AC-TCTGAGCGA--------------GAGAAAGCTCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90277651 407 - 90373283 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACACCGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGTCAGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGTGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGAGG--GGCTC-AC-TCTGAGCGA--------------GAGAAAGCTCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82268 407 - 179258 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCACACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACACCGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACATCAGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGTGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGAGG--GGCTC-AC-TCTGAGCGA--------------GAGAAAGCTCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5567992 407 - 5823884 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACACCGAGGTGAAGGACGCCTCTGTTTCGGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACATCAGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCCCCG-AATAAAGGGTGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGT--GG---GGAGG--GGCTC-AC-TCTGAGCGA--------------GAGAAAGCTCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48403 406 + 372756 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCACTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGTGACGGCAGTGAGGACACTGAGGTGAAGGACGCCTCTGTTTCAGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACATCAGGACAGGAGGAGATTCATCGCCCCAAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCTCTG-AATAAAGGACGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC---G---GGAGG--GGCTT-AC-TCTGGGCAA--------------GAGAAAGCCCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285029 407 + 16356641 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACGCTGAGGTGAAGGACGCCTCTGTTTCAGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGGCGTCAGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCTCTG-AATAAAGGGCGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--AG---GGAGG--GGCTT-AC-TCTGGGCAA--------------GAGAAAGCCCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154291 407 + 1231380 CCCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGTGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGTGACGGCAGTGAGGACACTGAGGTGAAGGACGCCTCTGTTTCAGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGGCGTCAGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCTCTG-AATAAAGGGCGCTTAGTGTGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GGAGG--GGCTT-AC-TCTGGGCAA--------------GAGAAAGCCCTTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2686626 406 + 11732439 ACCAGTTTACAGAGCTGCCCCCTGGCCAAGAAGAGGAAGCTGGAGGGCGCTGAGGCTGAGCACCTGGTGTCCAAGAGGAAGTCGCACCCCCTGAAGCTGGCTCTGGACGAGGGCTTTGGTGTGGACAGTGACGGCAGTGAGGACGCTGAGGTGAAGGACGCCTCTGTTTCAGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCTGAGACGTCAGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCTTTCTTCTCTG-AATAAAGGGCGCTCAGTGTGGCCCTGGAGAATCGCAGCCTGTGAGC--GG---GGAGG--GGCTT-AC-TCAGGGCAA--------------GAGAGAG-CCGTCCTGAGAACAAGGCATGTCTTGTCCCAACATGTGCTGG-GCTTCCTGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56867040 403 + 57149010 CCCAGTTTGCAGAGCTGCCCTCTGGCCAAGAAGAGGAAGCTGGAGGGAGTGGAGGCCGAGCACCTGGTGTCCAAGAGGAAGTCGCAGCCCCTGAAGCTGGCTCTGCACGAGGGCTGTGGTGTGGACAGCGACGGCAGTGAGGACACCGAGGTGAAGGACGCCTCTGTTTCAGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCCGAGCTGTCTGGACAGGAGGAGATTCATCGCCCCGAGCCAGCTGAAGGTGCTTTGTCGCGCCCTGT-GCCCG-GATAAAGGGTGCTCAGTGTGGCCCTGGAGAATCGCAGCCTGTGAGC--GG---GCAGG--GGCTC-GC-GCTG-GCAA--------------GAGAAAGCCT-TCCCGAGAACAAGGCGCGTCTTGTGCCGACATTTGCC-G-GCTTCCTGGG i micMur3.chr18 I 1969 I 1305 s proCoq1.NW_012150197v1 1860932 406 - 2029793 CCCAGTTTGCAGAGCTGCCCTCTGGCCAAGAAGAGGAAGCTGGAGGGCGTTGAGGCCGAGCACCTGGTGTCCAAGAGGAAGTCACTCCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGATGGCAGTGAGGACACCGAGGTGAAGGACGCCTCTGTTTCAGATGAATCGGAAGGAACTCTGGAGGGGGCCGAGGCCGAGATGTCTGGACAGGAGGAGATTCATCGTCCCGAGCCAGCTGAAGGTGCTTTGTCGCTCCCGCTCCCCCG-GATAAAGGGTGCTTAGTGTGGCCCTGCAGAATCGCAGCCTGTGAGC--GG---GGAGG--GGCTC-GC-TCTG-GCGA--------------GAGAAAGCCCGTCCCGAGAACAAGGCACGTCTTGTCCCAGCACGTGCTGG-GCTTCCTGGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22848446 405 + 22939663 CCCAGTTTGCAGAGCTGCCCTCTGGCCAAGAAGAGGAAGCTGGAGGGTGCTGAGGCTGAGCACCTGGTATCCAAGAGGAAGTCACACCCCCTGAAGCTGGCTCTGGACGAGGGCTATGGTGTGGACAGCGACGGCAGTGAGGACACCGAGGTGAAGGACGCCTCTGTTTCAGATGAATCGGAAGGAACTCTGGAGGGGGCTGAGGCTGAGATGTCTGGACAGGAGGAGATTCATCGTCCCGAGCCAGCTGAAGGTGCTTTGTTGCTCTTTCTCCCCTG-AATAAAGGGTGCTCAGTGTGGTCCTGGAGAATCATAGACTGTGAGC--AG---GGAGG--GGCTC-AC-CCAA-GAGA--------------GAGAAAGCCCTTCCTGAGAACAAGGCACGTC-TGTGCCAACATGTGCTGG-GCTTCCTGGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181795641 405 + 182113224 TTCAGCTTACAGAGTTGCCCTCTGGCCAAGAAGAGAAAACTGGAGGATGCTGAGACTGAGCACCTGGTATCCAAGAGGAAGTCACACCCTCTGAGGCTGGCTCTGGATGAGGGTTACCGCATGGACAGTGATGGCAGTGAGGATGCTGAAGTGAAGGACGTCTCTGTTTCAGATGAATCAGAAGGACCCCTGGAGGAGGCTGAGGCTGAGATGTCAGGACAGGAGGAGATTCATCACCCACAGACAGCTGAAGGTACTATTTTGCTCTTTCTCCTTTG-AATAAAGGCTGCTTAGTGTAGCCCTGGAGAATTGCAGCCTGTGAGG--GGGATGGGGG--AGCTCGGT-TCAGTGC-----------------AGAAAGCTG-TCTTGAGAACAAGGAATGTCTTGTCCTGACATGTGC--A-GCTTCCTGGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47610783 417 + 47698779 CCCAGTTTGCAGAGCTGCCCTCTGGCCAAGAAGAGGAAGCTGGAGGGTGCCCAGGCCGAGCACCTGGTGTCCAAGCGGAAGTCCCACCCCCTGAAGCTGGCTCTGGACGAGGGCTACAGCGTGGACACCGACGGCAGCGAGGATGCCGAGGTGAAGGACGCCTCTGTTTCAGATGAATCGGAAGGAACTCTGGAGGAGGACGAGGCTGAAATGTCAGGACAGGAGGAGATTCATCGTCCTGAGCCAGCTGAAGGTGCTTTGTGGCTCTTTCTCCCCCGAAATAAAGGGTGCTTAGTGCGGCCCTGGAGAATTGCAGCCTGTGAGC--GG---GAGGGCCGCCCC-AG-TCAGTGAAA------GGGCCGC-GAGGAAGCCCTTCCCGAGAACAAGCGAGGGCTTGTCCTGATGCTCGGCGGTGCTTCCTGG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 246413 390 - 397369 --CAGTCTGCAGAGCTGCCCGCTGGCCAAGAAGAGGAAGCTGGAGGGCGCCGAGGCGGAGCACCTGGCGTCCAAGAGGAAGTCCCAGCCCCTGCGGCTGGCCCTGGACGAGGGCTACGGCGTGGACAGCGACGGCAGCGAGGAGGCCGAGCTGAAGGACGCCTCTGTTTCGGGTGAATCGGAAGGAACTCCGG---------------------------AGGAGGAGGCCCACCGCCCAGGCCCAGCTGAAGGTGCTTTGTCG-TCTTTCT-CCCGG-AATAAAGGGCGCTTGGTGCG--CCTGGGGGCTCGCAGCCTGCAGGCCGGG---GAGGG--GGCTT-GCGTCTGGGCGAGTGAAAGGGCCGCAGAGAAAGGCCTTCCTGAGAACAAGGCCGGTCTTGT-CCGGCATGTGCCCG-GCTTCCTGGG i dasNov3.JH569290 C 0 C 0 a score=707571.000000 s hg38.chr20_KI270870v1_alt 114545 57 + 183433 -----------------------------AGAGAGGTCTGCCCATGGTGTTTATGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG s panTro5.chr20 66440761 57 + 66533130 -----------------------------AGAGAGGTCTGCCCATGGTGTTTATGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115901 57 + 62195757 -----------------------------AGAGAGGTCTGCCCATGGTGTTTATGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505090 57 - 578057 -----------------------------AGAGAGGTCTGCCCATGGTGTTTTTGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028603 57 - 110113093 -----------------------------AGAGAGGTCTGCCCATGGTGTTTATGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92757873 57 - 92844088 -----------------------------AGAGAGGTCTGCCCATGGCGTTTATGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425245 57 + 96509753 -----------------------------AGAGAGGTCTGCCCATGGCGTTTATGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896553 57 - 16982598 -----------------------------AGAGAGGTCTGCCCATGGCGTTTATGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698871 57 - 3785965 -----------------------------AGAGAGGTCTGCCCATGGTGTTTGTGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278058 56 - 90373283 -----------------------------AGAGAGGTCTGCCCgtggtgtttat-gggc----ctgtggtgtgtgtgtgtgtgaacactg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82675 57 - 179258 -----------------------------AGAGAGGTCTGCCCATGGTGTTTGTGGGGC----CTGTGGTGTGTTTGTGTGTGAACACTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568399 57 - 5823884 -----------------------------AGAGAGGTCTGCCCGTGGTGTTTATGGGGC----CTGTGGTGTGTTTGTGTGTGAACACGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48809 56 + 372756 -----------------------------AGAGAGGTCTG-CCCTGGTGTTTGTGGGGC----CTATGGTGTGTTTGTGTGCGAACACTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285436 56 + 16356641 -----------------------------AGAGAGGTCTG-CCATGGTGTTTGTGGGGC----CTATGGTGTGTCTGTGTGCGAACACTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154698 56 + 1231380 -----------------------------AAGGAGGTCTG-CCATGGTGTTTGTGGGGC----CCATGGTGTGTTTGTGTGTGAACACTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2687032 56 + 11732439 -----------------------------AGAGAGGTCTG-CCATGGTGTTTGTGGGGC----CTATGGTGTGTTTGTGTGCGAACACTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1861338 55 - 2029793 -----------------------------AGAGGGGCCTGCCCACGGTGCT--CGGGGT----CTGCGGTGCGTTTGTGTGCGAGCACTG i proCoq1.NW_012150197v1 C 0 I 68 s otoGar3.GL873542 22848851 56 + 22939663 -----------------------------AGAGGGGCCTGTCTACCGTGCTTGTGGGGT----CTATGGT-TGTTTGTGTGCAGACACTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796046 55 + 182113224 -----------------------------AAAGGGGTCTGCCCAGGATTGGGAGGGGGTGCTACTATAGA------GTGTGTGAACACTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47611200 45 + 47698779 -----------------------------AGAGGGGCCGGAGCGGGGCGCCTG-AGGGC----CTGGGGCCCCT-----------CACTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 246803 79 - 397369 AGAGGGGCTGCTCGGGGTCCGCGGGCGCGAAGGGGGTGTG-GCGTGGTGTGTGT---GC----CGGGGGTGTGCCTGTGTGTGC---CTG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56867443 1305 + 57149010 I a score=132108.000000 s hg38.chr20_KI270870v1_alt 114602 13 + 183433 TGTGCGTAGGAGA s panTro5.chr20 66440818 13 + 66533130 TGTGCATAGGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115958 13 + 62195757 TGTGCATAGGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505147 13 - 578057 GGTGCATAGGAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028660 13 - 110113093 TGTGCGTAGGAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92757930 13 - 92844088 TGTGTGTGGGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425302 13 + 96509753 TGTGTGTGGGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896610 13 - 16982598 TGTGTGTGGGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698928 13 - 3785965 TGTGTGTAGGAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278114 13 - 90373283 tgtgtgtAGGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82732 13 - 179258 TGTGTGTAGGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568456 13 - 5823884 TGTGTGTAGGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48865 13 + 372756 TGTACGTAGGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285492 13 + 16356641 TGTACGTAGGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154754 13 + 1231380 TGTACGTAGGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2687088 13 + 11732439 TGTATGCAGGAGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22848907 12 + 22939663 -GTGGATGGGGGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796101 13 + 182113224 TGTGCAGGGTAGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47611245 12 + 47698779 TGCGCACAGAGA- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 246882 13 - 397369 CGTGGGCTGGAGA i dasNov3.JH569290 C 0 I 620 e proCoq1.NW_012150197v1 1861393 68 - 2029793 I e micMur3.chr18 56867443 1305 + 57149010 I a score=29223.000000 s hg38.chr20_KI270870v1_alt 114615 2 + 183433 GA s panTro5.chr20 66440831 2 + 66533130 GA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115971 2 + 62195757 GA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505160 2 - 578057 GA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028673 2 - 110113093 GA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92757943 2 - 92844088 GA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425315 2 + 96509753 GA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896623 2 - 16982598 GA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698941 2 - 3785965 GA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278127 2 - 90373283 GA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82745 2 - 179258 GA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568469 2 - 5823884 GA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48878 2 + 372756 GA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285505 2 + 16356641 GA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154767 2 + 1231380 GA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2687101 2 + 11732439 GA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22848919 2 + 22939663 GA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796114 2 + 182113224 GA i mm10.chr2 C 0 I 53 e proCoq1.NW_012150197v1 1861393 68 - 2029793 I e canFam3.chr24 47611257 0 + 47698779 C e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=342765.000000 s hg38.chr20_KI270870v1_alt 114617 47 + 183433 GGCAGGACAGAC--AGAGACACGGGGCTG--------------GTGTGTGTGTGTG----------------CAGTTGT s panTro5.chr20 66440833 51 + 66533130 GGCAGGACAGAC--ACAGACACGGGGCTG--------------gtgtgtgtgtgtg------------tgtgcagttgt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62115973 51 + 62195757 GGCAGGACAGAC--ACAGACACGGGGCTG--------------gtgtgtgtgtgtg------------tgtgcagttgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505162 53 - 578057 GGCAGGACAGAC--ACAGACACGGGGCTG--------------gtgtgtgtgtgtg----------tgtgtgcagttgt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028675 63 - 110113093 GGCAGGACAGAC--ACAGACACGGGGCTG--------------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgCAGTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92757945 51 - 92844088 GGCAGGGCAGAC--ACAGACACGCGGCTG--------------GTGCGTGTGTGTG------------TGTGCAGTTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425317 51 + 96509753 GGCAGGGCACAC--ACAGACACGCGGCTG--------------GTGCGTGTGTGTG------------TGTGCAGTTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896625 53 - 16982598 GGCAGGGCAGAC--ACAGACACGCGGCTG------------gtgtgtgtgtgtgtg------------tgtgCAGTTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3698943 57 - 3785965 GGCAGGGCAGAC--ACAGACACGCGGCTG--------gtgtgtgtgtgtgtgtgtg------------tgtgCAGTTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278129 55 - 90373283 GGCAGGGCAGAC--ACAGACACGCGGCTG----------gtgtgtgtgtgtgtgtg------------tgtgCAGTTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82747 59 - 179258 GGCAGGGCAGAC--ACAGACACGCGGCTG------gtgtgtgtgtgtgtgtgtgtg------------tgtgCAGTTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568471 65 - 5823884 GGCAGGGCAGAC--ACAGACACGGGGCTGgtgtgtgtgtgtgtgtgtgtgtgtgtg------------tgCGCAGTTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48880 39 + 372756 GGCAGGGCAGAC----AGACTCAGGGCTG-------------TGTGTGTGTGTGTT----------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285507 29 + 16356641 GGCAGGACAGAC----AGACTCAGGGCTG-------------TGTG--------------------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154769 39 + 1231380 GGTAGGACAGAC----AGACTCAGGGCTG-------------TGAGTGTGTGTGTG----------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2687103 46 + 11732439 GGCAGGACAGAC----AGACTCAGGGCtg-------------tgtgtgtgtgtgtg------------tgtg----tgt i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22848921 45 + 22939663 GGCAGGACAGACATATAGACGCAAGGCTG----------------------GTGTG------------TGGGCAGTTGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47611257 42 + 47698779 CGCCGGACAGAC----GGACAGACGGCCG--------AGGGCTATGCATGTGCG------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861393 68 - 2029793 I e mm10.chr2 181796116 53 + 182113224 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=65579.000000 s hg38.chr20_KI270870v1_alt 114664 11 + 183433 AGTGTGTTTTG s panTro5.chr20 66440884 11 + 66533130 agtgtgtTTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116024 11 + 62195757 agtgtgtTTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505215 11 - 578057 agtgtgtTTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028738 11 - 110113093 AGCGTGTTTCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92757996 11 - 92844088 AGCATGTTTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425368 11 + 96509753 AGCATGTTTCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896678 11 - 16982598 AGCATGTTTCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699000 11 - 3785965 AGCATGTTTCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278184 11 - 90373283 AGCATGTTTCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82806 11 - 179258 AGCATGTTTCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568536 11 - 5823884 AGCATGTTTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48919 3 + 372756 --------TCG i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1154808 3 + 1231380 --------TCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2687149 10 + 11732439 -gtgtgtCTTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22848966 8 + 22939663 ---GTGTCCCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796169 11 + 182113224 AGTTTGATTCT i mm10.chr2 I 53 C 0 e proCoq1.NW_012150197v1 1861393 68 - 2029793 I e canFam3.chr24 47611299 0 + 47698779 C e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I e saiBol1.JH378156 16285536 0 + 16356641 C a score=458506.000000 s hg38.chr20_KI270870v1_alt 114675 51 + 183433 GCAGGTGTGTCTGCATGTATATGAGAGAGACAGACAAG--------GCTGTGTCTCTGT s panTro5.chr20 66440895 51 + 66533130 GCAGGTGTGTCTGCATGTATATGAGAGAGACAGACAAG--------GCTGTGTCTCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116035 51 + 62195757 GCAGGTGTGTCTGCATGTATATGAGAGAGACAGACAAG--------GCTGTGTCTCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505226 51 - 578057 GCAGGCGTGTCTGCATGTATATGAGAGAGACAGACAAG--------GCTGTGTCTCTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028749 51 - 110113093 GCAGGTGTGCCTGCATGTATATGAGAGAGACAGACAAG--------GCTGTGTCTCTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758007 47 - 92844088 GCAG--GTGTCTGCATGTATAT--GAGAGACAGACAAG--------GCTGTGTCTCCGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425379 47 + 96509753 GCAG--GTGTCTGCATGTATAT--GAGAGACAGACAAG--------GCTGTGTCTCCGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896689 47 - 16982598 GCAG--GTGTCTGCATGTATAT--GAGAGACAGACAAG--------GCTGTGTCTCCGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699011 47 - 3785965 GCAG--GTGTCTGCATGTATAT--GAGAGACAGACAAG--------GCTGTGTCTCTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278195 47 - 90373283 GCAG--GTGTCTGCATGTATAT--GAGAGACAGACAAG--------GCTGTGTCTCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82817 47 - 179258 GCAG--GTGTCTGCATGTATAT--GAGAGACAGACAAG--------GCTGTGTGTCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568547 47 - 5823884 GCAG--GTGTCTGCATGTCTAT--GAGAGACAGACAAG--------GCTGTGTCTCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48922 51 + 372756 GCAGGTGTGTCTGCATGTATGGGAGAGAGACAGACAAG--------GCTGTGTCTCTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285536 5 + 16356641 ------------------------------------------------------TCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154811 51 + 1231380 GCAGGTGGGTCTGCATGCATAGGAGAGAGACAGACAAG--------GCTGTGTCTCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2687159 51 + 11732439 GCAGGTGTGTCTGCATGTATAGGAGAGAGACAGACAAG--------GCTGTGTCTCTGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1861461 51 - 2029793 GCAGGTGTGTCTGTGTGCGTGTGAGAGAGACAGACGGG--------GCTGTGTCTCTGT i proCoq1.NW_012150197v1 I 68 I 79 s otoGar3.GL873542 22848974 49 + 22939663 GCAGGTGTGTC--TGTGAGTGTGAGAGAGACAGATAGG--------GCTGTGTTTCTGC i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181796180 58 + 182113224 -GAGGCAAGGCTCCATGTGTGTGAGAAATAAAGACAAATAATGCCTGTTGTGCCTCTGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47611299 16 + 47698779 ----------------------------------CGGG--------GCCGGGCCTCAG- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=105613.000000 s hg38.chr20_KI270870v1_alt 114726 23 + 183433 GTGTCTGTAAGTGGGGAAGGGAG s panTro5.chr20 66440946 23 + 66533130 GTGTCTGTAAGTGGGGAAGGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116086 23 + 62195757 GTGTCTGTAAGTGGGGAAGGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505277 23 - 578057 GTGTCTGTAAGTGGGGAAGGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028800 23 - 110113093 GTGTCTGTAAGTGGGGAAGGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758054 19 - 92844088 CT----GTATGTGGGGAAGGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425426 19 + 96509753 CT----GCATGTGGGGAAGGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896736 19 - 16982598 CT----GTATGTGGGGAAGGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699058 19 - 3785965 CT----GTGTGTGGGGAAGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278242 23 - 90373283 GTGTCTGTACGTGGGGAAGGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82864 15 - 179258 GT--------GTGGGGAAGGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568594 23 - 5823884 GTGTCTGTAAGTGGGGAAGGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48973 21 + 372756 GT--CTGTAAGCAGGGAAGGAAG i calJac3.chrUn_GL286459 C 0 I 4 s saiBol1.JH378156 16285541 21 + 16356641 GT--CTGTAAGCAGGGAAGGAAG i saiBol1.JH378156 C 0 I 4 s cebCap1.NW_016107870v1 1154862 21 + 1231380 GT--CTGTAAGCAGGGAAGGAAG i cebCap1.NW_016107870v1 C 0 I 9 s otoGar3.GL873542 22849025 19 + 22939663 GTCCCTG---GTGGGGGAGGTG- i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181796238 9 + 182113224 ----CCGTGTGAT---------- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1861512 79 - 2029793 I e canFam3.chr24 47611315 0 + 47698779 C e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I e aotNan1.NW_018500483v1 2687210 0 + 11732439 C a score=49426.000000 s hg38.chr20_KI270870v1_alt 114749 5 + 183433 GATCT s panTro5.chr20 66440969 5 + 66533130 GATCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116109 5 + 62195757 GATCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505300 5 - 578057 GATCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028823 5 - 110113093 GGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758073 5 - 92844088 GGTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425445 5 + 96509753 GGTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896755 5 - 16982598 GGTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699077 5 - 3785965 GGTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278265 5 - 90373283 GGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82879 5 - 179258 GGTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568617 5 - 5823884 GGTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 48998 5 + 372756 GGTCT i calJac3.chrUn_GL286459 I 4 C 0 s saiBol1.JH378156 16285566 5 + 16356641 GGTCT i saiBol1.JH378156 I 4 C 0 s aotNan1.NW_018500483v1 2687210 5 + 11732439 GGTCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22849044 5 + 22939663 CTTCT i otoGar3.GL873542 C 0 I 4 s mm10.chr2 181796247 5 + 182113224 GCTCT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1861512 79 - 2029793 I e canFam3.chr24 47611315 0 + 47698779 C e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I e cebCap1.NW_016107870v1 1154883 9 + 1231380 I a score=620336.000000 s hg38.chr20_KI270870v1_alt 114754 80 + 183433 TAGACTG-GCCCTCTGTTCTGCCTGGCCCTCTGGGAGACCTGCCTGGGGGCATGGGTGAGAGGTCTGCGTTCCCCTGAGGT s panTro5.chr20 66440974 80 + 66533130 TAGACTG-GCCCTCTGTTCTGCCTGGCCCTCTGGGAGACCTGCCTGGGGGCATGGGTGAGAGGTCTGCGTTCCCCTGAGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116114 80 + 62195757 TAGACTG-GCCCTCTGTTCTGCCTGGCCCTCTGGGAGACCTGCCTGGGGGCATGGGTGAGAGGTCTGCGTTCCCCTGAGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505305 80 - 578057 TAGACTG-GCCCTCTGTTCTGCCTGGCCCTCTGGGAGACCTGCCTGGGGGCATGGGTGAGAGGTCTGCGTTCCCCTGAGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028828 80 - 110113093 TAGACTG-GCCCTCTGTTCTGCCTGGCCCTCTGGGAGACCTGCCTGGGGGCATGGCTGAGAGGTCTGCTTTCCCCTGAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758078 63 - 92844088 TAGA------------------CTGGCCCTCTGGGAGACCTGCCTGGGGGCATGGGTGAGAGGTCTGCTTTCCCCTGAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425450 63 + 96509753 TAGA------------------CTGGCCCTCTGGGAGACCTGCCTGGGGGCATGGGTGAGAGGTCTGCTTTCCCCTGAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896760 63 - 16982598 TAGA------------------CTGGCCCTCTGGGAGACCTGCCTGGGAGCATGGGTGAGAGGTCTGCTTTCCCCTGAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699082 62 - 3785965 TAGA------------------CGGGCCCTCTGGGAGACCTGCCTGGG-GCATGGGTGAGAGATCTGCTTTCCCCTGAGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278270 63 - 90373283 TAGA------------------CTGGCCCTCTGGGAGACCTGCCTGGGGGCATGGGTGAGACGTCTGCTTTCCCCTGAGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82884 62 - 179258 TAGA------------------CGGGCCCTCTGGGAGACCTGCCT-GGGGCATGGGTGAGAGGTCTGCTTTCCCCTGAGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568622 63 - 5823884 TAGA------------------CTGGCCCTCTGGGAGACCTGCCTGGGTGCATGGGTGAGAGGTCTGCTTTCCCCTGAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 49003 80 + 372756 TAGACTG-CCTCTCTGTTTGGCCTGGCCCTCTGGGAGACCTGCCTGGGGGCAGGGGTGAGGGGTCTGCTTCCCCCTGAGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285571 80 + 16356641 TAGACTG-GCTCTCTGTTCAGCCTGGCCCTCTGGGAGACGTGCCTGGGGGCAGGGGTGAGGGGTCTGCTTCCCCCCGAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154892 80 + 1231380 TAGACTG-GCTCTCTGTTCGGCCTAGCCCTCTGGGAGACCTGCCTGGGAGCAGGGGTGAGGGGTCTGCTTTCCCCTGAGGC i cebCap1.NW_016107870v1 I 9 C 0 s aotNan1.NW_018500483v1 2687215 80 + 11732439 TAGACTG-GCTCTCTGTTCGGCCGGGCCCTCTGGGAGACCTGCCTGGGGGTAGGGGTGAGGGGTCTGCTTCCCCCTGGGGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22849053 71 + 22939663 CAGA-------CTCCGTCTTGTCTGGCTCTCTGTGATAGCTTCCTAGGG--AAGAGTGAG-GATCTGCTTGGCCCTGAGGT i otoGar3.GL873542 I 4 C 0 s mm10.chr2 181796252 65 + 182113224 TAGACAGAGCCCATCCTTC---CTGGCCC---ATGAGAGTTGACTGGG----------CTGGATCTACTTTGTTCTCAGAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47611315 21 + 47698779 ----------------------CAGGCCCTGGGGGAG------CTGGGG-------------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861512 79 - 2029793 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=551283.000000 s hg38.chr20_KI270870v1_alt 114834 56 + 183433 ACTCACAGGCAGATGCTGAGGAAACACCTCAGGTTGAGCTTCAGGTGATTGAGGAC s panTro5.chr20 66441054 56 + 66533130 ACTCACAGGCAGATGCTGAGGAAACACCTCAGGTTGAGCTTCAGGTGATTGAGGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116194 56 + 62195757 ACTCACAGGCAGATGCTGAGGAAACACCTCAGGTTGAGCTTCAGGTGATTGAGGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505385 56 - 578057 ACTCACAGGCAGATGCTGAGGAAACACCTCAGGTTGAGCTTCAGGTGATTGAGGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028908 56 - 110113093 ACTCACAGGCAGATGCTGAGGAAGCACCTCAGGTTGAGCTTCAGGTGATTGAGGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758141 55 - 92844088 ACTCACAGGCGGATGCGGAGGAAACACCTCAGGTTGAG-TTCAGGTGATTGAGGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425513 55 + 96509753 ACTCACAGGCGGATGCGGAGGAAACACCTCAGGTTGAG-TTCAGGTGATTGAGGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896823 55 - 16982598 ACTCACAGGCAGATGCGGAGGAAACACCTCAGGTTGAG-TTCAGGTGATTGAGGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699144 55 - 3785965 ACTCACAGGCAGATGCGGAGGAAACACCTCAGGTTGAG-TTCAGGTGATTGAGGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278333 55 - 90373283 ACTCACAGGCAGATGCTGAGGAAACACCTCAGGTTGAG-TTCAGGTGATTGAGGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 82946 55 - 179258 ACTCACAGGCAGATGCGGAGGAAACACCTCAGGTTGAG-TTCAGGTGATTGAGGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568685 55 - 5823884 ACTCACAGGCAGATGCTGAGGAAACACCTCAGGTTGAG-TTCAGGTGATTGAGGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 49083 48 + 372756 GCTCACAGGCAGATGCTGAGGAAATACCTGAGCTTGAGTT--------CAGGGGAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285651 56 + 16356641 GCTCACAGGCAGATGCTGAGGAAATACCTGAGCTTGAGTTTCAGGGGACTGGGGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1154972 56 + 1231380 GCTCACAGGCAGACGCCAAGGAAATACCTGAGCTTGAGTTTCAGGTGACTGGGGAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2687295 56 + 11732439 GCTCACAGGCAGATGCTGAGGAAATACCTGAGCTTGAGTTTCAGGTGACTGGGGAC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1861591 56 - 2029793 ACTCACAGGCGGGCGCTGAGGAAACACCTCAGGCTGAACGGCAGGTGATCGAGGAC i proCoq1.NW_012150197v1 I 79 I 1137 s otoGar3.GL873542 22849124 46 + 22939663 ACT-ATAGGC---------AGAAACACCTCAGGGTGGACAAGAAGCAACCGAGGAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796317 48 + 182113224 -ACCAAGAGCAGGTACTGATGAAATACCTCACTTCAGG------GTGAATCAGGA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47611336 1 + 47698779 ---------------------------C---------------------------- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=856125.000000 s hg38.chr20_KI270870v1_alt 114890 78 + 183433 CAGATGGAGCCTCTGAAGACGGGGTGCCCGGGGAGGCCAAGAGGGGAAGGAGGAAAGCAGA--------CGAGTCCCCCACTTCCT s panTro5.chr20 66441110 78 + 66533130 CAGGTGGGGCCTCTGAAAACGGGGTGCCCGGGGAGGCCAAGAGGGGAAGGAGGAAAGCAGA--------CGAGTCCCCCACTTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116250 78 + 62195757 CAGGTGGGGCCTCTGAAAACGGGGTGCCCGGGGAGGCCAAGAGGGGAAGGAGGAAAGCAGA--------CGAGTCCCCCACTTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505441 78 - 578057 CAGGTGGGGCCTCTGAAAACGGGGTGCCCGGGGAAGCCAAGAGGGGAAGGAGGAAAGCAGA--------CGAGTCCCCCACTTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110028964 78 - 110113093 CAGGTGAGGCCTCTGAAAATGGGGTGTCCGGGGAAGCCAAGAGGGGAAGGAGGAAAGCAGA--------CGACTCTCCCACTTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758196 78 - 92844088 CAGGTGGGGCCTCTGAAAATGGGGTGCCCGGGGAAGCCAAGACGGGAAGGAGGAAAGCAGA--------TGAGTCCCCCATTTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425568 78 + 96509753 CAGGTGGGGCCTCTGAAAATGGGGTGCCCGGGGAAGCCAAGACGGGAAGGAGGAAAGCAGA--------TGAGTCCCCCATTTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896878 78 - 16982598 CAGGTGGGGCCTCTGAAAATGGGGTGCCCGGGGAAGCCGAGACGGGAAGGAGGAAAGCAGA--------TGAGTCCCCCATTTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699199 78 - 3785965 CAGGTGGGGCCTCTGAAAATGGGGTGCCCGGGGAAGCCAAGACGGGAAGGAGGAAAGCAGA--------TGAGTCCCCCATTTCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278388 78 - 90373283 CAGGTGGGGCCTCTGAAAATGGGGTGCCCGGGGAAGCCAAGACGGGAAGGAGGAAAGCAGA--------TGAGTCCCCCATTTCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83001 78 - 179258 CAGGTGGGGCCTCTGAAAATGGGGTGCCCGGGAAAGCCAAGACGGGAAGGAGGAAAGCAGA--------TGAGTCCCCCATTTCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568740 78 - 5823884 CAGGTGGGGCCTCTGAAAATGGGGTGCCCGGGGAAGCCAAGACGGGAAGGAGGAAAGCAGA--------TGAGTCCCCCATTTCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 49131 77 + 372756 CAGGTGGGGCCTCTGAAAATGGGGTGCCCAGGGAGGCCAAGAGGGGAAGAAGGAAAGCAGA--------TGAGTCCCCCACTTCC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285707 76 + 16356641 CAGGTAGGGCCTCTGAAAATGGGGTGCCCGGGGAGGCCAAGAGGGGAAGAAGGAAAGCAGA--------TGAGT-CCCCACTTCC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1155028 77 + 1231380 CAGGTGGGGTCTCTGAAAATGGGGTGCCCGGGGAGGCCAAGAGGGGAAGAAGGAAATCAGA--------TGAGTCCCCCACTTCC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2687351 77 + 11732439 CAGGTGGGGCCTCTGAAAATGGGGTGCCCAGGGAGGCCAAGAGGGGAAGAAGGAGAGCAGA--------TGGGTCCCCCACTTCC- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22849170 67 + 22939663 CACATGGGGCTTCTGAAGGTGGGGCCTCTGGGGAAGCCTGGAGGGAAAGGA------CAGA-------------CCCTCTGTTCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796365 76 + 182113224 ----------CTCTGAAGGTGGGCTGCTCATAGAAGCCAAGAGAGGAAAGAAGGCATCTGAGAGTCTGCTGACTTCCCAACTTTCT i mm10.chr2 C 0 I 301 s canFam3.chr24 47611337 38 + 47698779 AGGATGGGGCTGC-------AGGGTGCC-----------------------------------------TGGGACCCCGGCTTCCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=1626064.000000 s hg38.chr20_KI270870v1_alt 114968 169 + 183433 TGTGGGGTCTACCAGGACTGCCAT-GTTGGAGCTCCTAGCCCTTGGCAAAAGTGCATGAAGCAGGTGCTTTGGCCCCTGGGTCCCGGAGGGAGGGGTCTGTG-CCCCTGAGAGCCCTGGCAGATCTGTAGAGACCTGGGG-TCAG-AT-GAGGCCCAAGGTCCAC-TC----CCCC-CAC s panTro5.chr20 66441188 169 + 66533130 TGTGGGGTCTACCAGGACTGCCAT-GTTGGAGCACCTAGCCCTTGGCAAAAGTGCATGAAGCAGGTGCTTTGGCCCCTGGGTCCCGGAGGGAGGGGTCTGTG-CCCCTGAGAGCCCTGGCAGATCTGTAGAGACCTGGGG-TCAG-AC-GAGGCCCAAGGTccac-tc----cccc-cac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116328 169 + 62195757 TGTGGGGTCTACCAGGACTGCCAT-GTTGGAGCACCTAGCCCTTGGCAAAAGTGCATGAAGCAGGTGCTTTGGCCCCTGGGTCCCGGAGGGAGGGGTCTGTG-CCCCTGAGAGCCCTGGCAGATCTGTAGAGACCTGGGG-TCAG-AC-GAGGCCCAAGGTccac-tc----cccc-cac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505519 169 - 578057 TGTGGGGTCTACCAGGACTGCCAT-GTTGGAGCACCTAGCCCTTGGCAAAAGTGGATGAAGCAGGTGCTTTGGCCCCTGGGTCCCGGAGGGAGGGGTCTGTG-CCCCTGAGAGCCCTGGCAGATCTGTAGAGACCTGGGG-TCAG-AC-GAGGCCCAAGGTCCAC-TC----CCCT-CAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029042 169 - 110113093 TGTGGGGTCTACCAGGACTGCCGT-GTTGGAGCACCTAGCCCTTGGCAAAAGCGGATGAAGCAGGTGCTTTGGCCCCTGGGTTCCGGAGGGAGGGGTCTGTG-CCCCTGAGAGCCCTGGCAGATCTGTAGAGCCCTGGGG-TCAG-AC-GAGGCCCAAGGTCCGC-TC----CCCC-CGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758274 169 - 92844088 TGGGGGGTCTACCAGGACTGCCGT-GTTGGGGCACCGAGCCCTTGGCGGAAGTGGGTGAAGCAGGTGCTTTGGCCCCTGGGTTCCAGAGGGAGGGGTCTGTA-CCCCTGAGAGCCCTGGCAGATCTGTAGAGAACTGGGG-TCAG-AC-GAGGCCCAAGGTCCGC-TC----CCCC-TGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425646 169 + 96509753 TGGGGGGTCTGCCAGGACTGCCAT-GTTGGGGCACCGAGCCCTTGGCGGAAGTGGGTGAAGCAGGTGCTTTGGCCCCTGGGTTCCAGAGGGAGGGGTCTGTA-CCCCTGAGAGCCCTGGCAGATCTGTAGAGAACTGGGG-TCAG-AC-GAGGCCCAAGGTCCGC-TC----CCCC-TGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16896956 169 - 16982598 TGGGGGGTCTACCAGGACTGCCAT-GTTGGGGCACCGAGCCCTTGGCGGAAGTGGGTGAAGCAGGTGCTTTGGCCCCTGGGTTCCAGAGGGAGGGGTCTGTA-CCCCTGAGAGCCCTGGCAGATCTGTAGAGAACTGGGA-TCAG-AC-GAGGCCCAAGGTCCGC-TC----CCCC-TGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699277 169 - 3785965 TGGGGGGTCTACCAGGACTGCCAT-GTTGGGGCACCGAGCCCTTGGCGGAAGTGGGTGAAGCAGGTGCTTTGGCCCCTGGGTTCCAGAGGGAGGGGTCTGTA-CCCCTGAGAGCCCTGGCAGATCTGTAGAGAACTGGGG-TCAG-AC-GAGGCCCAAGGTCCGC-TC----CCCC-TGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278466 169 - 90373283 TGGGGGGTCTACCAGGACTGCCAT-GTTGGGGCACCGAGCCCTTGGCGGAAGTGGGTGAAGCAGGTGCTTTGGCCCCTGGGTTCCAGAGGGAGGGGTCTGTA-CCCCTGAGAGCCCTGGCAGATCTGTAGAGAACTGGGG-TCAG-AC-GAGGCCCAAGGTCCAC-TC----CCCC-TGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83079 169 - 179258 TGGGGGGTCTACCAGGACTGCCAT-GTTGGGGCACCGAGCCCTTGGCGGAAGTGGGTGAAGCAGGTGCTTTGGCCCCTGGGTTCCAGAGGGAGGGGTCCGTA-CCCCTGAGAGCCCTGGCAGATCTGTAGAGACCTGGGG-TCAG-AC-GAGGCCCAAGGTCCGC-TC----CCCC-TGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568818 169 - 5823884 TGGGGGGTCTACCAGGACTGCCAT-GTTGGGGCACCGAGCCCTTGGCGGAAGTGGGTGAAGCAGGTGCTTTGGCCCCTGGGTTCCAGAGGGAGGGCTCTGTA-CCCCTGAGTGCCCTGGCAGATCTGTAGCGGCCTGGGG-TCAG-AC-GAGGCCCAAGGTCAGC-TC----CCCC-TGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 49208 159 + 372756 TGTGGGGTCGACCAGGACTGCCAT-GTTGGGGCACCCAGCTCTTGGCAAAAGCGGGTGAAGTAAGTGCTTGGG-CCCTGGGTTCCGGAGAGAGGGATCTATA-CCCCTGAGAGCCCTGGCACATTTGTAGA--CCTGGGG-TCAG-AC-GAGGCCCAAGGTCCAC-CC------------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285783 160 + 16356641 TGTGGGGTTGACCAGGACTGCCAT-GTTGGGGCACCCAGCTCTTGGCAAAAGTGGGTGAAGTAAGTGCTTGGG-CCCTGGGTTCCAGAAGGAGGGGTCTGTA-GCCCTGAGAGCCCTGGCACATTTGTAGA--CCTGGGG-TCAG-AC-GAGGCCCAAGGTCCACTCC------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1155105 159 + 1231380 TGTGGGGTCGACCAGGACTGCCAT-GTTGGGGCACCCAGCTCTTGGCGAAAGCGGGTGAAGTAACTGCTTGGG-CCCTGGGTTCCAGAGGGAGGGGTCTATA-CCCCTGAGAGCCCTGGCACATTTGTAGA--CCTGGGG-TCAG-AC-TAGGCCCAAGGTCCAC-CC------------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2687428 163 + 11732439 TGTGGGGTCGACCAGGACTGCCAT-GTTGGGGCCCCCAGCTCTTGGTGAAAGCGGGTGAAGTAAGCGCTTGGG-CCCTGGGTTCCGGAGGGAGGGGTCTATA-CCCCTGAGAGCCCTGGCACGTTTGTAGA--CCTGGGG-TCAG-AC-GAGGCCCGAGGTCCAC-CCCCAC-------- i aotNan1.NW_018500483v1 C 0 I 11 s otoGar3.GL873542 22849237 158 + 22939663 TGTGGGGTCCACCAGAACTGGCAGAGTTGGGAAACCTAGCCCTTGACAAGAGCAGGT---GCAGGTAA------CCCTGAATCCTGGAAGGAGGGATCTGCATCCCCTGAGGGCCCT-GTAGAT-TGTGAAGTCCTGGGGTTCAG-ACTGAGGCTTATGGTTTGA-TG----CCC----- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47611375 105 + 47698779 -------------------------TGTGGGGCACCCAGACGTTGG--------------------------------------CAGAGGGAAGCATGCATG-TCCCCAAG---CCTGGCAGATC-GTGGAGCCCTGGGG-GTGGTGC-TGAGACCGAGGCCCGA-CC----CCATGTGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e mm10.chr2 181796441 301 + 182113224 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=63409.000000 s hg38.chr20_KI270870v1_alt 115137 15 + 183433 CATCCCC----ACCACTCA s panTro5.chr20 66441357 15 + 66533130 catcacc----accactca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116497 15 + 62195757 catcacc----accactca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505688 15 - 578057 CATCACC----ACCACTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029211 15 - 110113093 CATCCCC----ACCACTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758443 15 - 92844088 CATCCCC----ACCACCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425815 15 + 96509753 CATCCCC----ACCACCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897125 15 - 16982598 CATCCCC----ACCACCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699446 15 - 3785965 CATCCCC----ACCACCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278635 15 - 90373283 CATCCCC----ACCACCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83248 15 - 179258 CATCCCC----ACCACCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5568987 15 - 5823884 CGTCCCC----ACCACCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 49367 18 + 372756 CACCCCTACTAACTACCA- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285943 14 + 16356641 CACCCCT----GCTACTA- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1155264 14 + 1231380 CACCCCT----ACTACCA- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22849395 2 + 22939663 CA----------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47611480 9 + 47698779 CGTGTCC----AA------ i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e mm10.chr2 181796441 301 + 182113224 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I e aotNan1.NW_018500483v1 2687591 11 + 11732439 I a score=4730611.000000 s hg38.chr20_KI270870v1_alt 115152 479 + 183433 CCCAGCACTCCCCA-AGCTTCTGCAGTGGG--------GAAGGGTCTGAGATGG-----------ATTTCA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTTGGGGGG------CTCTGGAGTGAGTGCGCTGTCCCGTGGAATCAACATAGTCCTAGATCCCAGGTAGAAAAGACACACATTTTCCTGCTTTCTTATCAAGAAGGGCGTCTGGGGTTCAGCTGTCAA-CCTGGGCTTGGACTTTCCCCTCCGAAGTAGGTGGATGGCAGGGCCCATTCCTACCACTGTGGGACGTGCTGGCCCAGGTGTCCTTGCTGACAACCCTACGGGGCCTGCATGTGGTGAGC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------tcgttttgttttt-----gttttgagaga----gtctcactctgttgcccaggctggagtgcaggggcacgatcttgatttactgcaatctcctcctccttggttcaag-----------------------gaatagctgggactacaggtgt-gcaccaccac s panTro5.chr20 66441372 479 + 66533130 ccCAGCACTCCCCA-AGCTTCTGCAGTGGG--------GAAGGGTCTGAGATGG-----------ATTTCA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTTGGGGGG------CTCTGGAGTGAGTGCGCTGTCCCATGGAATCAACATAGTCCTAGATCCCAGGTAGAAAAGACACACATTTTCCTGCTTTCTTATCAAGAAGGGCGTCTGGGGTTCAGCTGTCAA-CCTGGGCTTGGACTTTCCCCTCCGAAGTGGGTGGATGGCAGGGCCCATTCCTACCACTGTGGGACGTGCTGGCCCAGGTGTCCTTGCTGACAACCCTACGGGGCCTGCATGTGGTGAGC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------tcgttttgttttt-----gttttgagaga----gtctcactctgttgcccaggctggagtgcaggggcacgatcttgatttactgcaatctcctcctcctcggttcaag-----------------------gaatagctgggactacaggtgt-gcaccaccac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116512 479 + 62195757 ccCAGCACTCCCCA-AGCTTCTGCAGTGGG--------GAAGGGTCTGAGATGG-----------ATTTCA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTTGGGGGG------CTCTGGAGTGAGTGCGCTGTCCCGTGGAATCAACATAGTCCTAGATCCCAGGTAGAAAAGACACACATTTTCCTGCTTTCTTATCAAGAAGGGCGTCTGGGGTTCAGCTGTCAA-CCTGGGCTTGGACTTTCCCCTCCGAAGTGGGTGGATGGCAGGGCCCATTCCTACCACTGTGGGACGTGCTGGCCCAGGTGTCCTTGCTGACAACCCTACGGGGCCTGCATGTGGTGAGC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------tcgttttgttttt-----gttttgagaga----gtctcactctgttgcccaggctggagtgcaggggcacgatcttgatttactgcaatctcctcctcctcggttcaag-----------------------gaatagctgggactacaggtgt-gcaccaccac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 505703 479 - 578057 CCCAGCACTCCCCA-AGCTTCTGCAGTGGG--------GAAGGGTCTGAGATGG-----------ATTTCA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTTGGGGGG------CTCTGGAGTGAGTGCACTGCCCCGTGGAATCAACATAGTCCTAGATCCCAGGTAGAAAAGACACACATTTTCCTGCTTTCTTATCAAGAAGCGCGTCTGGGGTTCAGCTGTCAA-CCTGGGCTTGGACTTTCCCCTCCAAAGTGGGTGGATGGCAGGGCCCATTCCTACCACTGTGGGACGTGCTGGCCCTGGTGTCCTTGCTGACAACCCTACGGGGCCTGCATGTGGTGAGC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------ttgttttgttttt-----gttttgagaga----gtctcactctgttgcccaggctggagtgcaggggtgcgatcttgatttactgcaatctcctcctcctgggttcaag-----------------------gaatagctgggactacaggtgt-gcaccaccac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029226 478 - 110113093 CCCAACACTCCCCA-AGCTTCTGCAGTGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTTGGGGGG-------TCTGGAGTGAGTGCGCTGCCCCGTGGAATCAACATAGTCCTAGATCCCAGGTAGAAAAGACACACATTTTCCTGCTTTCTTATCAAGAAAGGCGTCTGGAGTTCAGCCATCAG-CCTGGGCTTGGACGTTCCCCTCTGAAGTGGGTGGATGGCAGAGCCCGTTCCTACCACTGTGGGACATGCTGGCCCAGGTGTCCTTGCTGACAACCCTACGGGGCCTGCATGTGGTGAGC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------ttgttttgttttt-----gttttgagaga----gtctcactctgttgcccaggctggagtgcaggggcacgatcttgatttactgaagtctcctcctcccgggttcaaa-----------------------gaatagctgggactataggcgt-gcaccaccat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758458 480 - 92844088 CCCAACACTCCCCA-AGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTAGGGGGG------CTCTGGAGTGAGTGCGCTGCCCCGAGGAATCAACATAGTCCTAGATCGCAGGGAGAAGAGACACAGATTTTCCTGCTTTCTTATCAAGAAGGGCATCTGGAGTTGAGGCATCAT-CCTGGGCTTGGACTTTCCCCTCCGAAGTGGGTGGATGGCAGGGCCTGTTCCTACCACTGTGGGACGTGCTGGCCCAGGCGTCCTTGCTGACAACCCTATGGGACCTGCCCGTGGTGAGC-ACCGACCATATCTTAGtt-----------------------------------------------------------------------------ttgttttgtttct-----gtttcaagaga----gtctcactctgttgcccaggctggagtgcaggggcacaatcttgatttactgcaatctcctcctcccgggttcaag-----------------------gaatagctgggactacaggcgtggcaccaccac i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96425830 480 + 96509753 CCCAACACTCCCCA-AGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTAGGGGGG------CTCTGGAGTGAGTGCGCTGCCCCGAGGAATCAACATAGTCCTAGATCGCAGGGAGAAGAGACACAGATTTTCCTGCTTTCTTATCAAGAAGGGCATCTGGAGTTGAGGCATCAT-CCTGGGCTTGGACTTTCCCCTCCGAAGTGGGTGGATGGCAGGGCCTGTTCCTACTACTGTGGGACGTGCTGGCCCAGGCGTCCTTGCTGACAACCCTATGGGACCTGCCCGTGGTGAGC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------ttgttttgtttct-----gtttcaagaga----gtctcactctgttgcccaggctggagtgcaggggcacaatcttgatttactgcaatctcctcctcccgggttcaag-----------------------gaatagctgggactacaggcgtggcaccaccac i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897140 480 - 16982598 CCCAACACTCCCCA-AGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTAGGGGGG------CTCTGGAGTGAGTGTGCTGCCCCGAGGAATCAACATAGTCCTAGATTGCAGGGAGAAGAGACACAGATTTTCCTGCTTTCTTATCAAGAAGGGCATCTGGAGTTGAGGCATCAT-CCTGGGCTTGGACTTTCCCCTCTGAAGTGGGTGGATGGCAGGGCCTGTTCCTACCACTGTGGGACGTGCTGGCCCAGGCGTCCTTGCTGACAACCCTACGGGGCCTGCCTGTGGTGAGC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------ttgttttgtttct-----gtttcaagaga----gtctcactctgttgcccaggctggagtgcaggggcacaatcttgatttactgcaatctcctcctcccgggttcaag-----------------------gaatagctgggactacaggcgtggcaccaccac i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699461 478 - 3785965 CCCAACACTCCCCA-AGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTAGGGGGG------CCCTGGAGTGAGTGCGCTGCCCCGAGGAATCAACATAGTCCTAGATCGCAGGGAGAAGAGACACAGATTTTCCTGCTTTCTTACCAAGAAGGGCGTCTGGAGTTGAGGCATCAT-CCTGGGCTTGGA-TTTCCCCTCCGAAGTGGGTGGATGGCAGGGCCTCTTCCTACCACTGTGGGACGTGCTGGCCCAGGCGTCCTTGCTGACAACCCTACGGGGCCTGCGTGTGGTGAGC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------ttgttttgttttt-----gtttcgagaga----gtctcactctgttgcccaggctggagtgcaggggcacaatcttgatttactgcaatctcctcctcccgggttcaag-----------------------gaatagctgggactacaggcgt-gcaccaccat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90278650 466 - 90373283 CCCAACACTCCCCA-AGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAAGC--CAGAGAGGGTCCTCAGCCCCAGCTCCCTTGGGGGG------CTCTGGAGTGAGT-------------GAATCAACATAGTCCTAGATCGCAGGGAGAAGAGACACAGATTTTCCTGCTTTCTTATCAAGAAGGGCGTCTGGAGTTGAGGCATCAT-CCTGGGCTTGGACTTTCCCCTCCGAAGTGGGTGGATGGCAGGGCCTGTTCCTACCACTGTGGGACGTGCTGGCCCAGGCGTCCTTGCTGACAACCCTACGGGGCCTGCATGTGGTGAGC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------ttgttttgttttt-----gtttcgagaga----gtctcactctgttgcccaggctggagtgcaggggcacgatctttatttactgcaatctcctcctcccgggttcaag-----------------------gaatagctgggactataggcgt-gcaccaccat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83263 479 - 179258 CCCAACACTCCCCA-AGCTTCTGCAGTGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTAGGGGGG------CCCTGGAGTGAGTGCGCTGCCCCGAGGAATCAACATAGTCCTAGATCGCAGGGAGAAGAGACACAGATTTTCCTGCTTTCTTATCAAGAAGGGCATCTGGAGTTGAGGCATCAT-CCTGGGCTTGGACTTTCCCCTCCAAAGTGGGTGGATGGCAGGGCCTTTTCCTACCACTGTGGGACGTGCTGGCCCAGGCGTCCTTGCTGACAACCCTACGGGGCCTGCGTGTGGTGAAC-ACCTACCATATCTTAGtt-----------------------------------------------------------------------------ttgttttgttttt-----gtttcgagaga----gtctcactctgttgcccaggctggagtgcaggggcacaatcttgatttagtgcaatctcctcctcccgggttcaag-----------------------gaatagctgggactacaggcgt-gcaccaccat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569002 478 - 5823884 CCCAACACTCCCTA-AGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAGAGC--CAGAGAGGGTCCTCAACCCCAGCTCCCTTGGGGGG------CTCTGGAGTGAGTGCGCTGCCCCGTGGAATCAACACAGCCCTAGATCGCAGGGAGAAGAGGCACAGATTTTCCTGCTTTCTTATCAAGAAGGGCATCTGGAGTTGA-GCATCAT-CCTGGGCTTGGACTTTCCCATCCGAAGTGGGTGGATGGCAGGGCCTGTTCCTACCACTGTGGGACGCGCTGGCCCAGGCGTCCCTGCTGACAACCCTATGGGGCCTGCATGTGGTGAGC-ACCCACCATATCTTAGtt-----------------------------------------------------------------------------ttgttttgttttt-----gttccgagaga----gcctcactctgttgcccaggctggagtgcaggggcacgaccttgatttactgcagcctcttcctcccgggctcaag-----------------------gaatagctgggactacaggcgt-gcaccactac i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 49385 474 + 372756 CCCAACACTCCCCA-AGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAAGC--CAGAGAGGGTCCCCAGACTCAACTCCCTTGTGGGG------CTCTGGAGTGAGTGTGCTGCCCCATGGGATCAAGCTATCCCTAGACCCCAGGTAGAAAAGACACAAATGTTCCTGCTTTCTTATAACGAAGGGCACCTGGAGTTTAGGCATCAG-CCTGGGCTTGGACTTTCCCCTCCGAAGTGGGTGGATGGCAGGGATGGTTCCTACCACTGTGGGGTGTGCTGGCCCGAGAGTCCT-GCTGACAACCCTGCAGGGCCTGCGCGTAGTGAGC-ACCTACCACATCTTAGtt-----------------------------------------------------------------------------ttgttttgttttttgttagttttgagaga----gtctcactttgttgcccaggctg------aattgcacgatcttgacttactgcaat---ctcctcccgggttgaag-----------------------gaatagctgggactacaggcgt-gtaccaccat i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16285957 483 + 16356641 CCCAACACTCCCCA-GGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAAGC--CAGAGAGGGTCCCCAGCCTCAGCTCTCTTGTGGGG------CTCTGGAGTGAGCGTGCTGCCCCATGGGATCAAGCTATCCCTAGACCCCAGGTAGAAGAGACACAAACGTTCCTACTTTCTTATAAGGAAGGGCATCTGGAGTTCAGGCATCAG-CCTGGGCTTGGACTTTGCCCTCCGCGGTGGGTGGACGGCAGGGATGGCTCCCACCACTGTGGGGTGTGCTGGCCCGAGAGTCCC-GCTGACAACCCTGCAGGGCCTGCGTGTAGTGAGC-ACCTACTACATCTTAGtt-----------------------------------------------------------------------------ttgttttgttttttgtttgttttgagaga----gtctcactttgttgcccaggccggagtgcagtggcacgatcttgacttactgcaatttcctcctcccaggttcaag-----------------------gaatagctgggactacaggcat-gcaccaccac i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1155278 467 + 1231380 CCCAACACTCCCCA-AGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAAGGC--CAGAGAGGGTCCCCAGCCTCCGCTCCC-TGTGGGG------CTCTGAAGTGAGTGTGCTGCCCCATGGGATCAAGCTAACCCTAGACCCCAGGTAGAAAAGACACACATGTTCCTGCTTTCTTATAACAAAG---------------GGTATCAG-CCTGGGCTTGGACTTTCCCCTCCGAAGCGGGTGGACGGCAGGGATGGCCCCCACCGCTGTGGGGTGTGCTGGCCCGAGAGCCCC-GCTGACAACCCTGCAGGGCCTGTGTGTAGTGAGC-ACCTACCACATCTGAGtt-----------------------------------------------------------------------------tacttttgttttttgtttgttctgagaga----gtctcactttgttgcccaggctggagtgcagtggcacgatcttgacttactgcaatctcctcctcccaggttcaaa-----------------------gaatagctgggactacaggtgt-gcaccaccac i cebCap1.NW_016107870v1 C 0 I 394 s aotNan1.NW_018500483v1 2687602 471 + 11732439 CCCAACACTCCCCA-AGCTTCTGCAATGGG--------GAAGGGTCTGAGATGG-----------ATTTTA----GAAGCAGAGC--CAGAGACGGTCCCCAGCCTCAGCTCCCTTGTGGGG------CTCTGGAGTGAGCGTGCTGCCCCATGGGATCAAGATATCCCTGGACCCCAGGTAGAAAAGACGCAAATGTCCCTGCTTTCTTATGACGAAGGGCATCTGGAGTTCAGGCCTCAG--CTGGGCTTGGACTTTCCCCTCCGAAGTGGGTGGATGGCAGGGATGGTTCCCGCCACTGTACGGTGTGCTGGCCCGAGAGTCCT-GCTGACGACCCTGCAGGGCTTGCGTGCGGTGAGC-ACCTACCACGTCGTAGtt-----------------------------------------------------------------------------t-gttttgtgtttt----------aggga----gtctcactttgtcgcccaggctggagtgcagtggcacgatcttgagttactgcaatctcctcctcccgggttcaag-----------------------gaatagctgggactacaggcgt-gcactgccac i aotNan1.NW_018500483v1 I 11 C 0 s otoGar3.GL873542 22849397 585 + 22939663 -CTAACAACCCTCACATCTTCTGCTGTCAATTGACCTTGAAGGGTCTGAGGTAAATTTGTATTTTATTTCT----GAGGCTAATC--AAGGCAGGGTCCTTAGACATCTCTCCCTCCAGGGG------CTCTGGAGTGT---------------GGATCAAGGCCATCCTGGATTCCAGGTAGAAAAGACACTAAATTACCTGCTTCCTTACAAAGAAGGGTGTCTGGAGTTTGGCCATCAGTCCTGCAATTAGCTTCTTCTCTATGCAGTGGGCAAATGGTAGGGCCCGTTTCTTCTATTGCTGGGGGTGCTAGCCAGAGAGTCCTTGTAGATGATCCTG-AGGTTCTGCATCTAGTGGACAATCTACTAAATCTTAGTTATTGTGCTTAAAGTAATGACATTTGGGTCCTTTACAAATAAAACTTTATTTACTGCTTTTCTtttttttattaaacatttttattttttt-----atttttagagatagggtcttgctctgtcacctagcctggagtgcagtgg-gtgatcatagctcacagcagcttcg--atcctgagctgaagtgatctgcccaccttagcctctctagtagctgggactacaggtgt-gagccaccac i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47611489 313 + 47698779 -------------------------------------------GCCAGGGGTGC-----------CTTCTATGGTGGAGCCAATCCTCAGGGAGAGTCCTGACACTGGGCTCCCTCCTGGGGAGGTGGTGCTCGAAGGGCTGCGCGGTCCCTCGGGCTC-----------------TAGGTAGAAAGG--ACCAGCTTGCCTGCTTTCCTCCAGAGGAGGCAGTTTGGGGTTCGGGGTGCGG-CCCTGGCTGGCCCTCTCC----TGGAATGGGCGGCCGGCAGGGCTGGCTCCCACCCC-----------CTGGCC-----GTCCTTGTCCCCCATCCCACAGGGCCTGTGGGTCCTCAGC-ACCCGCAACGCCGTAGTC-----------------------------------------------------------------------------ATG---------------GC--------A----GT-------------------------------------------------------------------------------------------------TAAGAGCT----CTACATGTGT-G--------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e mm10.chr2 181796441 301 + 182113224 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=767502.000000 s hg38.chr20_KI270870v1_alt 115631 73 + 183433 gcccagctcatttttgtatttttagtagagacagggtttcgccatgttgaccaggctggtcttgaactcgtga s panTro5.chr20 66441851 73 + 66533130 gcccagctcatttttgtatttttagtagagacagggtttcgccatgttggccaggctggtcttgaactcctga i panTro5.chr20 C 0 C 0 s panPan2.chr20 62116991 73 + 62195757 gcccagctcatttttgtatttttagtagagacagggtttcgccatgttggccaggctggtcttgaactcctga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506182 73 - 578057 gcccagctcatttttgtatttttagtagagacagggtttcgccatgttggccaggctggtcttgaactcctga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029704 73 - 110113093 gcccagttcatttttgtatttttagtagagatagggtttcgccctgttggccaggctggtcttgaactcctga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92758938 73 - 92844088 gcccagctcatttttgtatttttagtagagacaaggtttcgccattttggccaggctggtcttgaactgctga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426310 73 + 96509753 gcccagctcatttttgtatttttagtagagacaaggtttcgccattttggccaggctggtcttgaactcctga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897620 73 - 16982598 acccagctcatttttgtatttttagtagagacaaggtttcgccattttggccaggctggtcttgaactcctga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3699939 73 - 3785965 gcccagctcatttttgtatttttagtagagacaaggtttcgccattttggccaggctggtcttgaactcctga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279116 73 - 90373283 gcccagctcatttttgtatttttagtagagacaaggtttcgccattttggccaggctggtcttgaactcctga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83742 73 - 179258 gcccagctcatttttgtatttttagtagagacaaggtttcgccattttggccaggctggtcttgagctcctga i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569480 73 - 5823884 gcccagctcgtttttgtatttttagtagagacagggtttcaccattttggccaggctggtcttgaactcctga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 49859 73 + 372756 gcctggctaatttttgtatttttagtagagacagggtttctccatgttggccaggctggtctcaaactcctga i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16286440 73 + 16356641 acctggctaatttttgtattttcagtagagacagggtttctccatgttggccaggctgatctctaactcctga i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156139 73 + 1231380 gcccagctaatttttgtatttttagtagagatggggttttgccatgttggccaggctggtcatgaactcctgt i cebCap1.NW_016107870v1 I 394 C 0 s aotNan1.NW_018500483v1 2688073 73 + 11732439 tcctagctaatttttgtatttttagtagagacagggtttctccatgttggccaggctggtctcaaacacctga i aotNan1.NW_018500483v1 C 0 I 386 s otoGar3.GL873542 22849982 71 + 22939663 -atcagctaatttttaagttttt-gtagagacgggatctcactatgttatctaggctggtcttaaactcctgg i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47611802 32 + 47698779 ------------------TCTTT--TAAAAACACAAATTCG---------------TGTTTTTAAAC------ i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e mm10.chr2 181796441 301 + 182113224 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=223072.000000 s hg38.chr20_KI270870v1_alt 115704 20 + 183433 cctcaggtgatccgcccgcc s panTro5.chr20 66441924 20 + 66533130 cctcaggtgatccgcccgcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117064 20 + 62195757 cctcaggtgatccgcccgcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506255 20 - 578057 cctcaggtgatctgcccgcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029777 20 - 110113093 cctcaggtgatccgcccgcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759011 20 - 92844088 cctcaggtgatccgcctgcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426383 20 + 96509753 cctcaggtgatccgcctgcc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897693 20 - 16982598 cctcaggtgatccgcctgcc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700012 20 - 3785965 cctcaggtgatccgcctacc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279189 20 - 90373283 cctcaggtgatccgcctgcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83815 20 - 179258 cctcaggtgatccgcctacc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569553 20 - 5823884 cctcaggtgatctgcctgcc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 49932 20 + 372756 cctcaggtgtcccgcccacc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16286513 20 + 16356641 cctcaggtgacccgcccgcc i saiBol1.JH378156 C 0 I 390 s cebCap1.NW_016107870v1 1156212 20 + 1231380 cctcaggtgatccacccccc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2688532 20 + 11732439 cctcaggtgatccacccgct i aotNan1.NW_018500483v1 I 386 C 0 s otoGar3.GL873542 22850053 20 + 22939663 cctcaaatgatcctcctgcc i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e canFam3.chr24 47611834 0 + 47698779 C e mm10.chr2 181796441 301 + 182113224 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=31626.000000 s hg38.chr20_KI270870v1_alt 115724 3 + 183433 tcg s panTro5.chr20 66441944 3 + 66533130 tcg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117084 3 + 62195757 tcg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506275 3 - 578057 tcg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029797 3 - 110113093 tcg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759031 3 - 92844088 tcg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426403 3 + 96509753 tcg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897713 3 - 16982598 tcg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700032 3 - 3785965 tcg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279209 3 - 90373283 tcg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83835 3 - 179258 tcg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569573 3 - 5823884 tca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 49952 3 + 372756 tcg i calJac3.chrUn_GL286459 C 0 I 411 s saiBol1.JH378156 16286923 3 + 16356641 tca i saiBol1.JH378156 I 390 C 0 s cebCap1.NW_016107870v1 1156232 3 + 1231380 tca i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2688552 3 + 11732439 tca i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22850073 3 + 22939663 tca i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e canFam3.chr24 47611834 0 + 47698779 C e mm10.chr2 181796441 301 + 182113224 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=492200.000000 s hg38.chr20_KI270870v1_alt 115727 55 + 183433 gcctcccaaagtcctgggattacaggcatgagccaccgagcccATTCTTATTT-------------------------------------------------------------AC s panTro5.chr20 66441947 55 + 66533130 gcctcccaaagtcctgggattacaggcgtgagccaccgcgcccATTCTTATTT-------------------------------------------------------------AC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117087 55 + 62195757 gcctcccaaagtcctgggattacaggcgtgagccaccgcgcccATTCTTATTT-------------------------------------------------------------AC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506278 55 - 578057 gcctcccaaagtcctgggattacaggcgtgagccaccgcgcccATTCTTATTT-------------------------------------------------------------AC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029800 55 - 110113093 gcctcccaaagtgctgggattataggcatgagccacctcgcccATTCTTATTT-------------------------------------------------------------AC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759034 55 - 92844088 gcctccccaggtgctgggattacaggcgtgagccaccacgcccATTCTTATTT-------------------------------------------------------------AC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426406 55 + 96509753 gcctccccaggtgctgggattacaggcgtgagccaccacgcccATTCTTATTT-------------------------------------------------------------AC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897716 55 - 16982598 gcctccccaggtgctgggattacaggcgtgagccaccacgcccATTCTTATTT-------------------------------------------------------------AC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700035 55 - 3785965 gcctccccaagtgctgggattacaggcgtgagccaccgcgcccATTCTTATTT-------------------------------------------------------------AC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279212 55 - 90373283 gcctccccaagtgctgggattacaggcatgagccaccatgcccATTCTTATTT-------------------------------------------------------------AC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83838 55 - 179258 gcctccccaagtgctgggattacaggcgtgagccaccacgcccATTCTTATTT-------------------------------------------------------------AC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569576 116 - 5823884 gcctccccaagtgctgggatgacaggcatgagccaccgcgcccATTTTTTTTTACTGCTTTTCAATTATGAAACAATTACTATTTTTTAAAATCTGACTTGCCCGTTTTTATTTAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50366 55 + 372756 gcctcccaaagtgctgggattacaggcatgagccactgtgcctggtcTTATTT-------------------------------------------------------------AC i calJac3.chrUn_GL286459 I 411 C 0 s saiBol1.JH378156 16286926 55 + 16356641 gcctcccaaagcgctgggattacaggcatgagccaccgtgcctggtcTTATTT-------------------------------------------------------------AC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156235 55 + 1231380 gcctcccaaagcgctgggattacaggcgtgagtcaccatgccATGTCTTATTT-------------------------------------------------------------AC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2688555 55 + 11732439 gcctcccaaagtgctgggattacaggcatgagccaccgcgtctggtcTTATTT-------------------------------------------------------------AC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22850076 33 + 22939663 atctcccaaagtT---------------TGAGCCACCCAG-------TGATTT-------------------------------------------------------------AC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47611834 15 + 47698779 ----------------------------------------CCCCTTTGTATTT-------------------------------------------------------------GC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e mm10.chr2 181796441 301 + 182113224 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=233095.000000 s hg38.chr20_KI270870v1_alt 115782 23 + 183433 TGATTTTCAATTATGAAACAATT s panTro5.chr20 66442002 23 + 66533130 TGATTTTCAATTATGAAACAATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117142 23 + 62195757 TGATTTTCAATTATGAAACAATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506333 23 - 578057 TGATTTTCAATTATGAAACAATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029855 23 - 110113093 TGTTTTTCAATTATGAAACAATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759089 23 - 92844088 TGCTTTTCAATTATGAAACAATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426461 23 + 96509753 TGCTTTTCAATTATGAAACAATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897771 23 - 16982598 TGCTTTTCAATTATGAAACAATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700090 23 - 3785965 TGCTTTTCAATTATGAAACAATT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279267 23 - 90373283 TGCTTTTCAATTATGAAACAATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83893 23 - 179258 TGCTTTTCAATTATGAAACAATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569692 23 - 5823884 TGCTTTTCAATTATGAAACAATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50421 23 + 372756 TGCTTTTATATTGTGAAATATAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16286981 23 + 16356641 TGCTTTTATATTGTGAAGtatat i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156290 23 + 1231380 TGCTTTTATATTGTGAAATATAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2688610 23 + 11732439 TGCTTTTATATTGTGAAATATAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22850109 23 + 22939663 TGCATTTCCATTATGAAGCAATT i otoGar3.GL873542 C 0 I 196 s mm10.chr2 181796742 23 + 182113224 TGATTTTCAATTATAAAATGACT i mm10.chr2 I 301 C 0 s canFam3.chr24 47611849 9 + 47698779 --------------GAAACAGTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=136668.000000 s hg38.chr20_KI270870v1_alt 115805 35 + 183433 ATTATT--------------------------------------------------------------------------------------------ATTTTTTT-AAAATCTGACTTGCTGCTTAA s panTro5.chr20 66442025 36 + 66533130 ATTATT--------------------------------------------------------------------------------------------ATTTTTTTTAAAATCTGACTTGCTGCTTAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117165 35 + 62195757 ATTATT--------------------------------------------------------------------------------------------ATTTTTTT-AAAATCTGACTTGCTGCTTAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506356 35 - 578057 ATTATT--------------------------------------------------------------------------------------------ATTTTTTA-AAAATCTGACTTGCTGCTTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029878 35 - 110113093 ATTATT--------------------------------------------------------------------------------------------ATTTTTTA-AAAATCTGACTTGCTACTTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759112 31 - 92844088 ATTA------------------------------------------------------------------------------------------------TTTTTT-AAAATCTGACTTGCTGCTTAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426484 31 + 96509753 ATTA------------------------------------------------------------------------------------------------TTTTTT-AAAATCTGACTTGCTGCTTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897794 31 - 16982598 ATTA------------------------------------------------------------------------------------------------TTTTTT-AAAATCTGACTTGCTGCTTAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700113 31 - 3785965 ATTA------------------------------------------------------------------------------------------------TTTTTT-AAAATCTGACTTGCTGCTTAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279290 31 - 90373283 ATTA------------------------------------------------------------------------------------------------TTTTTA-AAAATCTGACTTGCTGCTTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83916 31 - 179258 ATTA------------------------------------------------------------------------------------------------TTTTTT-AAAATCTGACTTGCTGCTTAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569715 31 - 5823884 ACTA------------------------------------------------------------------------------------------------TTTTTT-AAAATCTGACTTGCTGCTTAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50444 28 + 372756 ATAT---------------------------------------------------------------------------------------------------TTT-TAAATCAGATTTGCTGTTTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16287004 33 + 16356641 atat----------------------------------------------------------------------------------------------atatattt-taaatCGGATTTGCTGTTTAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156313 28 + 1231380 ATAT---------------------------------------------------------------------------------------------------TTT-TAAATCGGATTTGCAGTTTAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2688633 26 + 11732439 AT-----------------------------------------------------------------------------------------------------TTT-TAAATCGGATTTGCTGTTTAA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22850328 126 + 22939663 attgtttcagtttggccggggccaggtttgaaatggccactctcggtatatggggccggtgccctatccattgagccacaggcgccacccTGTGAAGCAATTTTTA-AAAACCTGAATGGCTCCATT- i otoGar3.GL873542 I 196 C 0 s mm10.chr2 181796765 22 + 182113224 ------------------------------------------------------------------------------------------------------TTTC----ATTTGATTTTTTTCTTTA i mm10.chr2 C 0 I 1 s canFam3.chr24 47611858 24 + 47698779 -------------------------------------------------------------------------------------------------------TTA-AAAATCTGTCGTATTCTTTAA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e micMur3.chr18 56867443 1305 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=263225.000000 s hg38.chr20_KI270870v1_alt 115840 21 + 183433 GCTCCATTGTATACAATGCAG s panTro5.chr20 66442061 21 + 66533130 GCTCCATTGTATACAATGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117200 21 + 62195757 GCTCCATTGTATACAATGCAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506391 21 - 578057 GCTCCATTGTATACAATGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029913 21 - 110113093 GCTCCATTGTATACAATGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759143 21 - 92844088 GCTCCATTGTATACAGTGCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426515 21 + 96509753 GCTCCATTGTATACAGTGCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897825 21 - 16982598 GCTCCATTGTATACAGTGCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700144 21 - 3785965 GCTCCGTTGTATACAGTGCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279321 21 - 90373283 GCTCCATTGTATACAGTGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83947 21 - 179258 GCTCCATTGTATACAGTGCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569746 21 - 5823884 GCTCCGTTGTATACGGTGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50472 21 + 372756 GCCCCATTGTATGAAATGCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16287037 21 + 16356641 GCCCCATTGTATGAAATGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156341 21 + 1231380 GCCCCATTGCATAAAATGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2688659 21 + 11732439 GCCCCGTTGTATAAAATGCAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56868748 20 + 57149010 GCTCCATTTTAT-AAATGCCG i micMur3.chr18 I 1305 C 0 s otoGar3.GL873542 22850454 21 + 22939663 GCTCCATTTTATAAAATGCAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796788 21 + 182113224 GTTCCACTGTATAAAATGCAG i mm10.chr2 I 1 C 0 s canFam3.chr24 47611882 12 + 47698779 GTTCCATTTTGT--------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1861647 1137 - 2029793 I e dasNov3.JH569290 246895 620 - 397369 I a score=1337568.000000 s hg38.chr20_KI270870v1_alt 115861 114 + 183433 GTTTATCTGATTTGGGAAAGTAAACG--TGATGGGAGAGGAACATTAA-GAAAAAGTATCAAAGTAATTCTTAGTTTAAAAAATACATCAGTGGCCCATGACCTGC---CTCCTAAAATA s panTro5.chr20 66442082 114 + 66533130 GTTTATCTGATTTGGGAAAGTAAACG--TGATGGGAGAGGAACATTAA-GAAAAAGTATCAAAGTAATTCTTAGTTTAAAAAATACATCAGTGGCCCATGACCTGC---CTCCTAAAATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117221 114 + 62195757 GTTTATCTGATTTGGGAAAGTAAAGG--TGATGGGAGAGGAACATTAA-GAAAAAGTATCAAAGTAATTCTTAGTTTAAAAAATACATCAGTGGCCCATGACCTGC---CTCCTAAAATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506412 114 - 578057 GTTTATCTGATTTGGGAAAGTAAACG--TGATGGGAGAGGAACATTAA-GAAAAAGTATCAAAGTAATTCTTAGTTTAAAAAATACATCAGTGGCCCATGACCTGC---CTCCTAAAATA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110029934 114 - 110113093 GTTTATCTGATTTGGGAAAGTAAACG--TGATGGGAGAGGAACATTAA-GAAAAACTATCAAAGTAGTTCTTAGTTTAAAAGATACATCAGTGGCCCATGACCTGC---CTCCTAAAATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759164 113 - 92844088 GTTGATCTGATTC-GGAAAGTAAACG--TGATGAGAGAGGAACATTAA-GGAAAACTATCCAAGTAATTCTTAGTTTAGAAAATACATCAGTGGCCCATGACCTGC---CTCCTGAAATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426536 113 + 96509753 GTTGATCTGATTC-GGAAAGTAAACG--TGATGAGAGAGGAACATTAA-GGAAAACTATCCAAGTAATTCTTAGTTTAGAAAATACATCAGTGGCCCATGACCTGC---CTCCTGAAATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897846 113 - 16982598 GTTGATCTGATTC-GGAAAGTAAACG--TGATGAGAGAGGAACATTAA-GGAAAACTATCCAAGTAATTCTTAGTTTAGAAAATACATCAGTGGCCCATGACCTGC---CTCCTGAAATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700165 113 - 3785965 GTTGATCTGATTC-GGAAAGTAAACG--TGATGAGAGAGGAACATTAA-GGAAAACTATCCAAGTAATTCTTAGTTTAGAAAATACATCAGTGGCCCATGACCTGC---CTCCTGAAATA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279342 113 - 90373283 GTTGATCTGATTC-GGAAAGTAAACG--TGATGAGAGAGGAACGTTAA-GGAAAAGTATCCAAGTAATTCTTAGTTTAGAAAATACATCAGTGGCCCATGACCTGC---CTCCTGAAATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 83968 113 - 179258 GTTGATCTGATTC-GGAAAGTCAACG--TGATGAGAGAGGAACATTAA-GGAAAACTATCCAAGTAATTCTTAGTTTAGAAAATACATCAGTGGCCCATGACCTGC---CTCCTGAAATA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569767 113 - 5823884 GTTGATCTGATTA-GGAAAGTAAACG--TGATGGGAGAGGAACGTTAA-GGAAAAGTATCGAAGTAATTCTTGGTTCAGAAAATACATCAGTGGCCCATGACCTGC---CTCCTGAAATA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50493 114 + 372756 GTTTATCTGGTTTGGGAAAGTAAACG--TGATGGGAGAGGAGCAGGAA-TAAAAAGTATCAAAGTAATTCTCGGTTTACAAAGTATGTCAGTGGCTCATGACCTGC---CTCCTAAGATA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16287058 111 + 16356641 GTTTATCTGGTTTGGGAAGGTAAACG--TGATGGGAGAGGAATAG----TAAAAAGTATCAAAGTTATTCTCGGTTTAAAAAGTACATCAGTGGCTCATGACCTGC---CTCCAAAAATA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156362 113 + 1231380 GTTTATCTGGTTTGGGAAAGTAAATG--TGATGGCAGAGGAACAGCAA-TAAAAAGTATCGAAGTCATTCTCAGTTTTAAAAGTACCTCA-TGGCTCATGACCTGC---CTCCTAAAATA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2688680 106 + 11732439 GTTTATCTGGTGTGGGAAAGTTAACG--TGATGGG--------AGTAA-TAAAAAGTATCAAAGTCATTCTCAGTTTAAAAAGCACGTCAGTGGTTCGTGACCTGC---CTCCTAAAATA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56868768 114 + 57149010 GTTTATCCGATCTGAGAAAGCTCATG--TAATGGGGGAAGAATATTAA-GAAAATATATTAAAATGATTCTCAGCTTTAAAAACACATCAGCAGCTCATGACCGAC---CTCCTAAAATA i micMur3.chr18 C 0 I 174 s proCoq1.NW_012150197v1 1862784 114 - 2029793 GTTTATCTGATTTGAGAAAGCTCATG--TCATGGGAGAGGAACATTAA-GAAAATATATTAAAATGATTCTCAGCTTTAGAAATACATCAGCAGCTCGTGACCCAC---CTCCTAAAATA i proCoq1.NW_012150197v1 I 1137 I 197 s otoGar3.GL873542 22850475 108 + 22939663 GTTTACCTTATTTGAGAG----CACA--TAATGGGGGAAGAACATTAA-TAAAA-ATGTCAAAGTAATTCTCATCTTTAAACATATATCAACAGCTCATGATT-AC---CTCCTAAAATA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796809 80 + 182113224 ATCTATCTGCTTTGAGAAAATAAATGATGGATGGAATAGGAATAAGAACTGAAAAATATCAAAGTAAT-------------------------------------C---TAGCTAAAATT i mm10.chr2 C 0 I 1 s canFam3.chr24 47611894 102 + 47698779 --------GATTTGAGAAAGTAGACA--TAAGGGTA---AGATGCTGA-CAAAAAATAGCAGAGTATTTCCCAGCTACAAAACCAGA--AGCGACTAGT--CCTGCTCTCTCCTAAAATG i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 246895 620 - 397369 I a score=856831.000000 s hg38.chr20_KI270870v1_alt 115975 100 + 183433 TATTCACCGTGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAAGGTCCATACCAAATCCCCACTTCTGGAGTTTCATGTTTCCCCTTGGCTCCCGTATA s panTro5.chr20 66442196 100 + 66533130 TATTCACTGTGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAAGGTCCGTACCAAATCCCCACTTCTGGAGTTTCATGTTTCCCCTTGGCTCCCGTATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117335 100 + 62195757 TATTCACCGTGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAAGGTCCGTACCAAATCCCCACTTCTGGAGTTTCATGTTTCCCCTTGGCTCCCGTATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506526 100 - 578057 TATTCACCGTGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAAGGTCCATACCAAATCCCCACTTCTGGAGTTTCATGTTTCCCCTTGGCTCCCGTATA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030048 100 - 110113093 TATTCACCATGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAAGGTCCATACCAAATCCCCACTTCTGGAGTTTCAGGTTTCCCCTTGGCTCCCGTATA i nomLeu3.chr13 C 0 T 2577 s rheMac8.chr10 92759277 99 - 92844088 TGTTCACCATGATTTCTGGATTCAGGCAGAAGCGTTGACAGAAA-GTCCATACCAAATCCCCACTTCGGGAGTTTCGTGTTTCTGCTTGGCTCCCGTGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426649 99 + 96509753 TGTTCACCATGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAA-GTCCATACCAAATCCCCACTTCGGGAGTTTCGTGTTTCTGCTTGGCTCCCGTGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16897959 99 - 16982598 TGTTCACCATGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAA-GTCCATACCAAATCCCCACTTCGGGAGTTTCGTGTTTCTGCTTGGCTCCCGTGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700278 99 - 3785965 TGTTCACCATGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAA-GTGCATACCAAATCCCCACTTCGGGAGTTTCGTGTTTCCGCTTGGCTCCCGTGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279455 99 - 90373283 TGTTCACCATGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAA-GTCCATACCAAATCCCCACTTCGGGAGTTTCGTGTTTCCGCTTGGCTCCCGTGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 84081 99 - 179258 TGTTCACCATGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAA-GTCCATACCAAATCCCCACTTCGGGAGTTTCGTGTTTCCGCTTGGCTCCCGTGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569880 99 - 5823884 TGTTCACCATGATATCTGGATTCAGGCAGAAGGGTTGGCAGAAA-GTCCATACCAAATCCCTACTTCGGGAGTTTCGTGTTTCCCCTCGGCTCCCGTGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50607 99 + 372756 TATTCACTGTGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAATCCCCATACCAAACCCCCACTTCTGGAATTCCTTGTTTC-CCCAGGCTCCCGTATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16287169 99 + 16356641 TATTCACCATGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAACCCCCATACCAAACCCCCACTTCTGGAGTTTCTTGTTTC-CCCGGGCTCCCATATA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156475 89 + 1231380 TATTCACCATGATTTCTGGATTCAGGCAGAAGGGTTGACAGAAACCCCCATACCAAACCCTCACTTCTGGAGTGTTGTGTTT--CCTGGGC--------- i cebCap1.NW_016107870v1 C 0 I 20 s aotNan1.NW_018500483v1 2688786 99 + 11732439 TATTCACCATGATTTCTGGATTCAGGCAGAAGGGCTGACAGAAACCCCCATACTGAACCCCCACTTCTGGAGTTTCGTGTTTC-CCCGGGCTCCCGTATA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22850583 34 + 22939663 ---------------------------------------AGTGA-------------------------GACCTCCTTGTCTCCCCTGTGCTGTGGTC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796890 83 + 182113224 ATTCCTTCTTGGTTTTTGAATCCAGGCAGAAG-GCTGACAGGATGGCTTA-----------CAGTTC---ATTTCCATATTT--TCTAAGCTACAGTGCT i mm10.chr2 I 1 C 0 s canFam3.chr24 47611996 82 + 47698779 AGCTCACGGTG-CGCCCATGTCCAGGCAG-------GGCACGGGCACCACCGGCCACGGTCCACTTCCGGGGCTT-GCGTGTC-CTCAGGCT-------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1862898 197 - 2029793 I e micMur3.chr18 56868882 174 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=295901.000000 s hg38.chr20_KI270870v1_alt 116075 28 + 183433 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG s panTro5.chr20 66442296 28 + 66533130 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117435 28 + 62195757 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506626 28 - 578057 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110027571 28 - 110113093 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i nomLeu3.chr13 T 2577 C 0 s rheMac8.chr10 92759376 28 - 92844088 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426748 28 + 96509753 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16898058 28 - 16982598 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700377 28 - 3785965 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279554 28 - 90373283 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 84180 28 - 179258 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5569979 28 - 5823884 AAGAGTGAGTGG--TAGGTCAGGTGGAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50706 28 + 372756 AAGGGTGAGTGG--TAGGTCAGGTACAGGG i calJac3.chrUn_GL286459 C 0 I 42 s saiBol1.JH378156 16287268 28 + 16356641 AAGAGTGAGCGG--TAGGTCAGGTGGAGGG i saiBol1.JH378156 C 0 I 43 s aotNan1.NW_018500483v1 2688885 28 + 11732439 AAGAGTGAGCAG--TGGGTCAGGTGGAGGG i aotNan1.NW_018500483v1 C 0 I 50 s otoGar3.GL873542 22850617 25 + 22939663 AAAAGTGGGAGG--TAAGAC---TGGAGTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181796973 30 + 182113224 GAGAGTGGGCAGGTGGGGATAGGTGGAGAG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1862898 197 - 2029793 I e canFam3.chr24 47612078 0 + 47698779 C e micMur3.chr18 56868882 174 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I e cebCap1.NW_016107870v1 1156564 20 + 1231380 I a score=39016.000000 s hg38.chr20_KI270870v1_alt 116103 5 + 183433 GTGGT s panTro5.chr20 66442324 5 + 66533130 GTGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117463 5 + 62195757 GTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506654 5 - 578057 GTGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110027599 5 - 110113093 GTGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759404 5 - 92844088 GTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426776 5 + 96509753 GTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16898086 5 - 16982598 GTGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700405 5 - 3785965 GTGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279582 5 - 90373283 GTGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 84208 5 - 179258 GTGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5570007 5 - 5823884 GTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50776 5 + 372756 GTAGG i calJac3.chrUn_GL286459 I 42 I 3 s saiBol1.JH378156 16287339 5 + 16356641 GTAGG i saiBol1.JH378156 I 43 I 3 s cebCap1.NW_016107870v1 1156584 5 + 1231380 GTAGG i cebCap1.NW_016107870v1 I 20 I 3 s otoGar3.GL873542 22850642 5 + 22939663 CTGAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181797003 5 + 182113224 TTGGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47612078 5 + 47698779 GTGCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1862898 197 - 2029793 I e micMur3.chr18 56868882 174 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I e aotNan1.NW_018500483v1 2688913 50 + 11732439 I a score=302312.000000 s hg38.chr20_KI270870v1_alt 116108 32 + 183433 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT s panTro5.chr20 66442329 32 + 66533130 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117468 32 + 62195757 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506659 32 - 578057 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110027604 32 - 110113093 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759409 32 - 92844088 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426781 32 + 96509753 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16898091 32 - 16982598 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700410 32 - 3785965 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279587 32 - 90373283 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 84213 32 - 179258 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5570012 32 - 5823884 GGGTGTGTTGGGGACTGGAGACCTGGAGTC-TT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50784 31 + 372756 GAGCGTGCTGAGGGCTGGAGACAT-GAGGC-TT i calJac3.chrUn_GL286459 I 3 C 0 s saiBol1.JH378156 16287347 31 + 16356641 GGGCATGTTGAGGGCTGGAGACAT-GAGGC-TT i saiBol1.JH378156 I 3 C 0 s cebCap1.NW_016107870v1 1156592 31 + 1231380 GGGCGTGTTGAGGGCTGGAGACAT-GAGCG-TT i cebCap1.NW_016107870v1 I 3 C 0 s aotNan1.NW_018500483v1 2688963 31 + 11732439 GGGCATGTTGAGGGCTGGAAACAT-GAGGC-TT i aotNan1.NW_018500483v1 I 50 C 0 s otoGar3.GL873542 22850647 32 + 22939663 CTTTGTGTTGAGTGCCAGAGACCTGGAGGC-TT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181797008 30 + 182113224 --TACTGTTGGGAGC-AGAGACCTGGAAACATT i mm10.chr2 C 0 C 0 s canFam3.chr24 47612083 8 + 47698779 GGGTGT-------------------------GG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1862898 197 - 2029793 I e micMur3.chr18 56868882 174 + 57149010 I e dasNov3.JH569290 246895 620 - 397369 I a score=382371.000000 s hg38.chr20_KI270870v1_alt 116140 34 + 183433 CCCACGTGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA s panTro5.chr20 66442361 34 + 66533130 CCCACCTGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117500 34 + 62195757 CCCACCTGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506691 34 - 578057 CCCACGTGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110027636 34 - 110113093 CCCACGTGTT---CT-CT----GGCCCCCATGTTG-ATTTTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759441 34 - 92844088 CCCACATGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426813 34 + 96509753 CCCACATGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16898123 34 - 16982598 CCCACATGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700442 34 - 3785965 CCCACATGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279619 34 - 90373283 CCCACATGCT---CT-CT----GGCCCCCATGTTG-ATTTTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 84245 34 - 179258 CCCACATGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5570044 34 - 5823884 CCCACATGCT---CT-CT----GGCCCCCACGTTG-ATTTTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50815 34 + 372756 CCCACATGCC---CT-CT----GGCCCCCATGTTG-ATTCTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16287378 34 + 16356641 TCTGCGTGCC---CT-CT----GGCCCCCATGTTG-ATTCTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156623 34 + 1231380 CCCACGTGCC---CT-CT----GGCCCCCATGTTG-ATTCTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2688994 34 + 11732439 CCCACGTGCC---CT-CT----GGTCCCCATGTTG-ATTCTGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22850679 36 + 22939663 -CCATGTGTTCTCCT-CT----GGCCCCCATGGTG-TTTCTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181797038 35 + 182113224 CCCCCATGCT---CT-CTTCAAGGCCCC---GTTG-TTTCTTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47612091 30 + 47698779 CCCCCCTGCG---C--------CGCTCCCACA-TG-TTTTTGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 247515 35 - 397369 CCAGCAGGCT---CTGCC----TGCGCCCACACTGCGTTCTG- i dasNov3.JH569290 I 620 C 0 e proCoq1.NW_012150197v1 1862898 197 - 2029793 I e micMur3.chr18 56868882 174 + 57149010 I a score=54890.000000 s hg38.chr20_KI270870v1_alt 116174 3 + 183433 TTT s panTro5.chr20 66442395 3 + 66533130 TTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117534 3 + 62195757 TTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506725 3 - 578057 TTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110027670 3 - 110113093 TTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92759475 3 - 92844088 TTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426847 3 + 96509753 TTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16898157 3 - 16982598 TTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700476 3 - 3785965 TTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279653 3 - 90373283 TTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 84279 3 - 179258 TTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5570078 3 - 5823884 TTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50849 3 + 372756 TTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16287412 3 + 16356641 TTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156657 3 + 1231380 TTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2689028 3 + 11732439 TTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1863095 3 - 2029793 TTT i proCoq1.NW_012150197v1 I 197 C 0 s otoGar3.GL873542 22850715 3 + 22939663 TTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181797073 3 + 182113224 TTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47612121 3 + 47698779 TTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 247550 3 - 397369 CTT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56868882 174 + 57149010 I a score=6261873.000000 s hg38.chr20_KI270870v1_alt 116177 383 + 183433 TGTGCAGGAAGGAGCCCCGTCAAGTCCCATTTTGGATCCAACCCCATCGGCAGCGCCACTGCCTCCTCCAAGGGCAGCTACAGCAGCTACCAGGGAATCATCGCAACTTCTCTCCTGAACTTGGGTCAAATTGCTGAAGAGACCCTGGTGGAAGAGGACTTGGGCCAGGCGGCCAAGCCAGGTCCTGGCATTGTGCACCTGCTTC---AG---GAGGCTGCAGAGGGAGCTGCCAGCGAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTCGAAGTCACCACCGAGCGCTCCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga s panTro5.chr20 66442398 383 + 66533130 TGTGCAGGAAGGAGCCCCGTCAAGTCCCATTTTGGATCCAACCCCATCGGCAGCGCCACTGCCTCCTCCAAGGGCAGCTACGGCAGCTACCAGGGAATCATCGCAACTTCTCTCCTGAACTTGGGTCAAATTGCTGAAGAGACCCTGGTGGAAGAGGACTTGGGCCAGGCGGCCAAGCCAGGTCCTGGCATTGTGCACCTGCTTC---AG---GAGGCTGCAGAGGGAGCTGCCAGCGAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTCGAAGTCACCACCGAGCGCTCCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117537 383 + 62195757 TGTGCAGGAAGGAGCCCCGTCAAGTCCCATTTTGGATCCAACCCCATCGGCAGCGCCACTGCCTCCTCCAAGGGCAGCTACGGCAGCTACCAGGGAATCATCGCAACTTCTCTCCTGAACTTGGGTCAAATTGCTGAAGAGACCCTGGTGGAAGAGGACTTGGGCCAGGCGGCCAAGCCAGGTCCTGGCATTGTGCACCTGCTTC---AG---GAGGCTGCAGAGGGAGCTGCCAGCGAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTCGAAGTCACCACCGAGCGCTCCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 506728 382 - 578057 TGTGCAGGAAGGAGCCCCGTCAAGTCCCATTTTGGATCCAACCCCATCGGCAGCCCCACTGCCTCCTCCAAGGGCAGCTACAGCAGCTACCAGGGAATCATCGCAACTTCTCTCCTGAACTTGGGTCAAATTGCTGAAGAGACCCTGGTGGAAGAGGACTTGGGCCAGGCGGCCAAGCCAGGTCCTGGCATTGTGCACCTGCTTC---AG---GAGGCTGCAGAGGGAGCTGCCAGCGAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATG-CGAGGAGGTCGTCGAAGTCACCACCGAGCGCTCCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110027673 383 - 110113093 TGTGCAGGAAGGAGCCCCGTCAAGTCCCATTTTGGATCCAACCCCATCGGCAGCCCCACTGGCTCCTCCAAGGGCAGCTATAGCAGCTACCAGGGAATCATCGCAACTTCTCTCCTGAACTTGGGTCAAGTTGCTGAAGAGACCCTGGTGGAAGAGGACTTGGGCCAGGCGGCCAAGCCAGGTCCTGGCATCGTGCACCTGCTTC---AG---GAGGCTGCAGAGGGAGCTGCCAGCGAGGACGGTGAAAAGGGCCTCTTTGTCCAGCCAGAGGATGCCGAGGAGGTCGTCGAAGTCACCACTGAGCGCTCCCAGGACCTGTGTTCCCAGTCCTTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCAGGA i nomLeu3.chr13 C 0 I 2192 s rheMac8.chr10 92759478 350 - 92844088 TGTGCAGGAAGGAGCCCCATCAAGTCCCATTTTGGATCCAACC------------CCCCTGGCTCCTCCAAGGGCAGCTATAGCAGTTACCAGGGAATCATCGCCACTTCGCTCCTGAACTTGGGTCAAATTGCTGAAGAGACTCT---------------------GGCGGCCAAGCCAGGCCCTGGCGTTGTGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCCGCCAGCGAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTAGAAGTCACCACCGAACGCTGCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96426850 350 + 96509753 TGTGCAGGAAGGAGCCCCATCAAGTCCCATTTTGGATCCAACC------------CCCCTGGCTCCTCCAAGGGCAGCTATAGCAGTTACCAGGGAATCATCGCCACTTCGCTCCTGAACTTGGGTCAAATTGCTGAAGAGACTCT---------------------GGCGGCCAAGCCAGGCCCTGGCGTTGTGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCCGCCAGCGAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTAGAAGTCACCACCGAACGCTGCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16898160 350 - 16982598 TGTGCAGGAAGGAGCCCCATCAAGTCCCATTTTGGATCCAACC------------CCCCTGGCTCCTCCAAGGGCAGCTATAGCAGTTACCAGGGAATCATCGCCACTTCGCTCCTGAACTTGGGTCAAATTGCTGAAGAGACTCT---------------------GGCGGCCAAGCCAGGCCCTGGCGTTGTGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCCGCCAGCGAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTAGAAGTCACCACCGAACGCTGCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700479 350 - 3785965 TGTGCAGGAAGGAGCCCCATCAAGTCCCATTTTGGATCCAACC------------CCACTGGCTCCTCCAAGGGCAGCTATAGCAGTTACCAGGGAATCATCGCCACTTCTCTGCTGAACTTGGGTCAAATTGCTGAAGAGACTCT---------------------GGCGGCCAAGCCAGGCCCTGGCGTCGTGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCCGCCAGCAAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTAGAAGTCACCACCGAACGCTGCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90279656 350 - 90373283 TGTGCAGGAAGGAGCCCCATCAAGTCCCATTTTGGATCCAACC------------CCACTGGCTCCTCCAAGGGCAGCTATAGCAGTTACCAGGGAATCATCGCCACTTCTCTCCTGAACTTGGGTCAAATTGCTGAAGAGACTCT---------------------GGCGGCCAAGCCAGGCCCTGGCGTTGTGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCTGCCAGCGAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTAGAAGTCACCACCGAACGCTGCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 84282 350 - 179258 TGTGCAGGAAGGAGCCCCATCAAGTCCCATTTTGGATCCAACC------------CCACTGGCTCCTCCAAGGGCAGCTATAGCAGTTACCAGGGAATCATCGCCACTTCTCTGCTGAACTTGGGTCAAATTGCTGAAGAGACTCT---------------------GGCGGCCAAGCCAGGCCCTGGCGTTGTGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCCGCCAGCGAGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTAGAAGTCACCACCGAACGCTGCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5570081 350 - 5823884 TGTGCAGGAAGGAGCCCCATCAAGTCCCATTTTGGATCCAACC------------CCACTGGCTCCTCCAAGGGCAGCTATAGCAGCTACCAGGGAATCATCGCCACTTCTCTCCTGAACTTGGGTCAGATTGCTGAAGAGACCCT---------------------GGTGGCCAAGCCAGGCCCTGGCATTGTGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCTGCCAGCGAGGAGGGTGAAAAAGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTTGTAGAAGTCACCACCGAACGCTGCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGCAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 50852 383 + 372756 TGTGCAGGAAGGAGCCCCGTCAAGTCCCATTTTGGATCCAACCCCATCAGCAGCCCCACTGGCTCCTCCAAGGGCAGCTATAGCAGCTACCAGGGAATCATTGCAACTTCTCTCCTGAACTTGGGCCAACTTGCTGAAGAGACCCTGGTGGAAGAAAACTTGGGCCAGGCAGCCAAACCAGGTCCTGGCATTGTGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCTGCCAGCGTGGAGGGTAAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCATTGAAGTCACCAGCGAGCGTTCCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGTAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16287415 383 + 16356641 TGTGCAGGAAGGAGCCCCGTCAAGTCCCATTTTGGATCCAACCCCATCAGCAGCCCCACTGGCTCCTCCAAGGGCAGCTATAGCAGCTACCAGGGAATCATCGCAACTTCTCTCCTGAACTTGGGCCAAGTTGCTCAAGAGACCCTGGTGGAAGAAGACTTGGGCCAGGCGGCGAAGCCAGGTCCTGGCATTGCGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCTGCCAGCATGGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTTGTGGAAGTCACCAGTGAGCGTTCCCAGGACCTGTGTCCCCAGTCCCTGGAGGGTGTAGCCAGTGCGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCATga i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1156660 383 + 1231380 TGTGCAGGAAGGAGCCCCGTCAAGTCCCACTTTGGATCCAACCCCATCAGCAGCCCCACTGGCTCCTCCAAGGGCAGCTATAGCAGCTACCAGGGAATCATCGCAACTTCTCTCCTGAACTTGGGCCAAGTTGCTCAAGAGACCCTGGTGGAAGAAGACTTGGGCCAGGCAGCCAAGCCAGGTCCTGGCATTGTGCACCTGCTTC---AG---GAGACCACTGAGGGAGCTGCCAGCACAGAGGGTGAAAAGGGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTCGAAGTCACCAGCGAGCGTTCCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGTAGCCAGTGAGGAGTCCAGCAAGCAGAAATGCATCCTGAGTCACga i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2689031 382 + 11732439 TGTGCAGGAAGGAGCCCCGTCAAGTCCCATTTTGGATCCAGGCCCATCCGCAGCCCCACTGGCTCCTCCAAGGGCAGCTATAGCGGTTTCCAGGGAATCATCGCAGCTTCTCTCCTGAACTTGGGCCAAGTTGCTGAAGAGACCCTGGTGGAAGAAGACTTGGGCCAGGCAGCGAAGCCGGGTCCTGGCATCGTGCACCTGCTTC---AG---GAGGCCACAGAGGGAGCTGCCAGCGTGGAGGGTGAAAA-GGCCTCTTCATCCAGCCAGAGGATGCCGAGGAGGTCGTCGAAGTTGCCAGCGAGCGTTCCCAGGACCTGTGTCCCCAGTCCCTGGAGGATGTAGCCAGTGAGGAGTCCAGCAAGCAGAAAGGCATCCTGAGTCACga i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56869056 386 + 57149010 TGTGCAGGAAGGAGCCCCATCAAGCCCCACTTTGGGGCCAACCCCGTCAGCAGCCCCGCCGGCTCCTCCAAGGGCAGCTACGGCAGCTACAAGGGAAGCATCGCCACTTCTCTGCTGAACTTGGGCCGGATCGCTGAAGAGACCCTGGTCGGGGAGGACCTGGGCCAGGTGGCCAAGCCAGGCCCCCGCATCGTGCACCTGCTTCAGGAG---GAGGCTGCAGAGGGGGCCACCAGTGACGAGGGTGAAAAGGACCTCTTCATCCAGCCCGAGGATGCGGAGGAGGTCGTCGAGGTCACCAGCGAGCGCTCCCAGGAGCTGTGTCCCGCGTCCCTGGAGGATGTGGCCAGCGAGGAGTCCAGCACGCACAAAGGCGTCCTGGGTCACga i micMur3.chr18 I 174 C 0 s proCoq1.NW_012150197v1 1863098 386 - 2029793 TGTGCAGGGAGGAGCCCCCTCAAGTCCCACTTTGGATCCAACCCCATCAGCAGCCCCACTGGCTCCTCCAAGGGCAGCTACGGCAGCTACAAGGGCATCATCGCAACTTCTCTGCTGAACTTGGGCCGAATTGCTGAAGAGACCCTGGTGGGGGAGGACTTGGGCCAAGGGGCCAAGCCAGGCCCCAGCATTGTGCACCTGCTCCAGGAG---GAGGCTGCAGAGGGAGCCACCAGTGATGAGGGTGAGAAGGACCTCTTTATCCAGCCGGAGGACGCGGAGGAGGTCGTTGAAGTCACCAGCGAGCGTCCCCAGGAGCTGTGTCCTCCGTCCCTGGAGGATGTGGCCAGTGAGGAGTCCAGCAAGCAAAAAGGCATCCTGGGTCACga i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22850718 386 + 22939663 TGTGCAGGAAGGAGCCCCATCAAGTCCCATTTTGGATCCAACCCCATCAGCAGCCCTACTGCCTCTTCCAAGGGTAGCTACAGCAGCTATAAAGGAATCATTGCAACTTCTCTCCTAAACTTGGGCCGAATTGCTGAAGAGACCCTGGTGGGGGAGGACTTTGGCCAAGTGGCCAAGCCAGGCCCCAGCATTGTGCACCTGCTTCAGGAG---GAGGCTGTGGAGGGAGCCACCAGTGATGAGGGTGAAAGGGACTTGTTCATCCAGCCAGAGGATGCAGAGGAGGTTGTTGAAGTCACCAGTGAGCGTTCCCAGGAGCTGTGTCCCCAGTCCCTGGAGGATGTGGCTAGTGAGGAGTCCAGCAAGCAAAAAGGCATCCTGGGTCATga i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181797076 386 + 182113224 TATGCAGGAAAAAGCCTCATCAAGCCCCATTTTGACTCCAACCCCACAAGCAGCCCTTCTGGCTTCTCCAAGAGCAGCTACAGTAGCTACCAGGGGATCATTGCAACTTCCCTCCTAAATCTGGGCCAAATTGCTGAAGAGGCCCTTGTGAAGGAGGATTCCGTCTCAGTAGCTAAGTTGAGCCCCACTGTTGTTCATCAGCTTC---AGGATGAGGCTGCAATGGGGGTCAACAGTGACGAGGGTGAAAAGGACCTCTTTATACAGCCAGAAGATGTGGAGGAGGTCATTGAAGTCACAAGTGAACGTTCCCAGGAGCCATGCCCCCAGTCTCTGAAGGATATGGTTAGTGAAGAGTCAAGTAAGCAGAAAGGAGTCCTAGGTCATga i mm10.chr2 C 0 C 0 s canFam3.chr24 47612124 386 + 47698779 TGTGCAGGAAGGAGCCCTGTCAAGTCCCACTTTGCATCCAAGCCCATCGGCAGCTCCGCGGGCCCCGCCAAGGGCAGCTACAGCAGCTACCAGGAGATCATTGCCACTTCTCTCCTAAACTTGGGCCAGATCGCCGTAGAGACCCTCGTTGGGGAGGACCTGGGCCAGGTGGCCAAGCCCGGCCCCGCTGTGGTGCACCTGCTTCAGGAA---GAGGCTGAGGAAGAGGCCACCAGTGACGAGGGGGAGAAGGACGTGTTCATCCGTCCAGACGACACAGAGGACGTCGTGGAAGTCAGCAGGGAGTGCTCCCAGGAGCCGGGTCCCCAGTCTGTGGAGGGTGTGGCCAGGGAGGAGTCCAGCAAGATGAAAGTCACCATGGGTAATga i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 247553 366 - 397369 TGCGCAGGGAGGGGCCCCGCGAAGCCGCGCTGTGGAGCCAGCCCTGCGAGCAGTCCCGCCGGCTCCTCCAAGGGCAGCTACAGCAGCTATCAGAAAATCATCGCCTCGTCTCTCTTGAACCTGGGCCAGATCGCGGACGACAGCCTGCCAGGGGCGGACGCGGGCCAGGCGGGCA---------CCAGCACCGCAGCCCTGGCTCAGGAG---GGGGCCGCGGACGGGGCCACCAGTGACGAGGACGAGAGAGACGTCTTCGTCCAGCCGGAAGATGCTGAGGAGGTCGTCGAGGTCACCACCGGGCGGCCCCAGGAGCTGCGCCCCGAAGCCCTGGAGGGCAGTGCCTGGGGCCAGTGCGGCCAGCAGGGGGGCAGC----------- i dasNov3.JH569290 C 0 C 0 a score=7689843.000000 s hg38.chr20_KI270870v1_alt 116560 524 + 183433 agaggaggacgaggaggag-------------------------------------------------------gaggaggaggaagaggaggaggaggaggatgaagaagaggaagaggaag-aggaggaggaagaggaa---------gaggaggaggaggaagag-------gaa---------gaggag-----------gaggaag--------------aggaagaggaagaggaggaggaggagg---CAGCTCCTGATGTGATCTTTCAGGAAGACACCTCTCACACCTCTGCCCAGAAGG---CCCCTGAGCTCCGGGGCCCAGAATCACCCAGTCCCAAGCCTGAGTACTCTGTTATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCGGAAGTCAACAGTCACTGACGAGTCGGAGATGCAGGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATCGCCCTGAAGGCTGAACAGGTGCGCACAGTCTGCGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCAGGGAAGGCAGCAAAGCCCCTGGACACTGTGCGGAAGAGTTACTACAGTAAAGGTAGGG s panTro5.chr20 66442781 512 + 66533130 agaggaggacgaggaggag-------------------------------------------------------gaggaggaggaagaggaggaggaggaggatgaagaagaggaagaggaag-aggaggaggaagaggaa---------gaggaggaggaggaagag-------gag---------gacgag-----------gaggagg--------------agga------------ggaggaggagg---CAGCTCCTGATGTGATCTTTCAGGAAGACACCTCTCACACCTCTGCCCAGAAGG---CCCCTGAGCTCCGGGGCCCAGAATCACCCAGTCCCAAGCCTGAGTACTCTGTTATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACTGACGAGTCGGAGATGCATGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACAGTCTGCGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCCGGGCCTGGGAGAGCCAGGGAAGGCAGCAAAGCCCCTGGACACTGTGCGGAAGAGTTACTACAGTAAAGGTAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62117920 519 + 62195757 agaggaggacgaggaggag-------------------------------------------------------gaggaggaggaagaggaggaggaggaggatgaagaagaggaagaggaagtaggaggaggaagaggaa---------gaggaggaggaggaagag-------gag---------gacgag-----------gaggagg--------------agga------ggaggaggaggaggagg---CAGCTCCTGATGTGATCTTTCAGGAAGACACCTCTCACACCTCTGCCCAGAAGG---CCTCTGAGCTCCGGGGCCCAGAATCACCCAGTCCCAAGCCTGAGTACTCTGTTATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACTGACGAGTCGGAGATGCATGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACAGTCTGCGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCCGGGCCTGGGAGAGCCAGGGAAGGCAGCAAAGCCCCTGGACACTGTGCGGAAGAGTTACTACAGTAAAGGTAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507110 506 - 578057 agaggaggacgaggaggag-------------------------------------------------------gaggaggaggaagaggaggaggaggaggaggaagaggaggaggaggagg-aggaagaggaggaggag---------gaggaggaggaggaagag-------gaa---------gaggaa-----------gaggaag--------------agga------------------ggagg---CAGCTCCTGATGTGATCTTTCAGGAAGACACCTCTCACACCTCTGCCCAGAAGG---CCCCTGAGCTCCGGGGCCCAGAATCACCCAGTCCCAAGCCGGAGTACTCTGTTATCGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACTGACGAGTCGGAGATGCATGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACAGTCTGCGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCAGGGAAGGCAGCAAAGCCCCTGGACACTGTGCGGAAGAGTTACTACAGTAAAGGTAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92759828 512 - 92844088 agaggaggatgaggaggag-------------------------------------------------------gaggaggaggaggaggaagaggaggaggaagaggatgaagaagaggaag-aggaagaggacgaggaa---------gaggaggaggaagaggac-------gag---------gaggag-----------gaggagg--------------agga------------ggaggaagagg---CAGCTCCTGATGTGATCTTTCAGGAGGACACCTCTCACACCTCTGCCCAGAAGG---CACCTGAGCTCCAGGGCCCAGAACCACCCAGTCCCAAGCCTGAGTACTCTGTGATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACTGACGAGTCGGAGATGCATGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACGGTCTGTGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCGGGGAAGGCAGCAAAGGCCCTGGACACTGTTCGGAAGAGCTACTACAGTAAAGGTAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96427200 509 + 96509753 agaggaggatgaggaggag-------------------------------------------------------gaggaggaggaggaggaagaggaggaggaagaggatgaagaagaggaag-aggaagaggacgaggaa---------gaggaggaggaagaggac-------------------gaggag-----------gaggagg--------------agga------------ggaggaagagg---CAGCTCCTGATGTGATCTTTCAGGAGGACACCTCTCACACCTCTGCCCAGAAGG---CACCTGAGCTCCAGGGCCCAGAACCACCCAGTCCCAAGCCTGAGTACTCTGTGATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACGGTCACTGACGAGTCGGAGATGCATGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACGGTCTGTGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCGGGGAAGGCAGCAAAGGCCCTGGACACTGTTCGGAAGAGCTACTACAGTAAAGGTAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16898510 512 - 16982598 agaggaggatgaggaggag-------------------------------------------------------gaggaggaggaggaggaagaggaggaggaagaggatgaagaagaggaag-aggaagaggacgaggaa---------gaggaggaggaagaggac-------gag---------gaggag-----------gaggagg--------------agga------------ggaggaagagg---CAGCTCCTGATGTGATCTTTCAGGAGGACACCTCTCACACCTCTGCCCAGAAGG---CACCTGAGCTCCAGGGCCCAGAACCACCCAGTCCCAAGCCTGAGTACTCTGTGATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAGCAGTCACTGACGAGTCGGAGATGCATGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACGGTCTGTGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCAGGGAAGGCAGCGAAGGCCCTGGACACTGTTCGGAAGAGCTACTACAGTAAAGGTAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3700829 506 - 3785965 Agag------gaggaggag-------------------------------------------------------gaggaggaggaggaggaagaggaggaggaagaggatgaagaagaggaag-aggaagaagacgaggaa---------gaggaggaggaagaggac-------gag---------gaggag-----------gaggagg--------------agga------------ggaggaggagg---CAGCTCCTGATGTGATCTTTCAGGAGGACACCTCTCACACCTCTGCCCAGAAGG---CACCTGAGCTCCAGGGCCCAGAACCACCCAGTCCCAAGCCTGAGTACTCTGTTATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACTGACGAGTCGGAGATGCACGACATGATGACCCGGGGCAACCTGGGCCTCCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACGGTCTGTGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCAGGGAAGGCAGCAAAGGCCCTGGACACTGTTCGGAAGAGCTACTACAGTAAAGGTAGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280006 518 - 90373283 agaggaggat---gaagag-------------------------------------------------------gaggaggaggaggaggaagaggaggaggaagaggatgaagaagaggaag-aggaagaggacgaggaa---------gaggaggaggaagaggat-------gaggaggaggaagaggag-----------gaggagg--------------agga------------ggaggaagagg---CAGCTCCTGATGTGATCTTTCAGGAGGACACCTCTCAAACCTCTGCCCAGAAGG---CACCTGAGCTCCAGGGCCCAGAACCACCCAGTCCCAAGCCTGAGTACTCTGTTATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACTGACGAGTCGGAGATGCATGACATGATGACCCGGGGAAACCTGGGCCTTCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACGGTCTGTGAGCCGGGCTGCCCGCCCGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCAGGGAAGGCAGCAAAGGCCCTGGACACTGTTCGGAAGAGCTACTACAGTAAAGGTAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 84632 506 - 179258 agaggaggat------gag-------------------------------------------------------gaggaggaggaggaggaagaggaggaggaagaggatgaagaagaggaag-aggaagaggacgaggaa---------gaggaggaggaagaggac-------gag---------gaggag-----------gaggagg--------------agga------------ggaggaggagg---CAGCTCCTGATGTGATCTTTCAGGAGGACACCTCTCACACCTCTGCCCAGAAGG---CACCTGAGCTCCAGGGCCCAGAACCACCCAGTCCCAAGCCTGAGTACTCTGTCATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACTGACGAGTCGGAGATGCACGACATGATGACCCGGGGCAACCTGGGCCTCCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACGGTCTGTGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCAGGGAAGGCAGCAAAGGCCCTGGACACTGTTCGGAAGAGCTACTACAGTAAAGGTAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5570431 506 - 5823884 agaggaggacgaggaggag-------------------------------------------------------gaggaggaggaggaggaagaagatgaagaagaggaagaggacgaggaag-aggaggaggaagaggac---------gaggaggaggaagag----------------------gaggag-----------gaggagg--------------agga------------ggaggaagagg---CAGCTCCTGATGTGATCTTTCAGGAGGACACCTCTCACGCCTCTGCCCAGAAGG---CCCCTGAGCTCCAGGGCCCAGAACCACCCAGTCCCAAGCCTGAGTACTCTGTTATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACTGACGAGTCGGAGATGCATGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATTGCCCTGAAGGCTGAACAGGTGCGCACGGTCTGTGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCAGGGAAGGCAGCAAAGGCCCTGGACACTGTTCGGAAGAGCTACTACAGTAAAGGTAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 51235 521 + 372756 ggaggaggatgaggaggaggag----------------------------------------------------gaggaggaagaggaggaggatgaagaggaggaagaggaagaagaggagg-aagaggaagaggaggag---------gaggaggtagaggaggaggaggta-gag---------gaggag-----------gaggagg--------------aaga------------ggaggaggagg---CAGCCTCTGATGTGATCTTTCAGGAGGACGCCTCCCACATCTCTGCCCAGAAGG---CCCCTGAGCTCCGGGGCCCAGAATCACCCAGTCCCAAGTCTGAGTACTCTGTTATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACTGATGAGTCGGAAATGCATGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATTGCTCTGAAGGCTGAGCAGGTGCGCACAGTCTGTGAGCCGGGCTGCCTGCCTGCCGAGCAGAGCAAGCTGGGCCTGGCAGAGCCAGGGAAAGCAGCAAAGCCCCTGGACACTGTGCGGAAGAGCTACTACAGTAAAGGTAGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16287798 521 + 16356641 ggaggaggaggaggaggaggaggaggat----------------------------------------------gaggaggaggaggaggaggatgaagaggaggaggaggaagatgaggagg-aggaggaggaagaggag---------gaggaggaagaagaagag-------gag---------gaggaa-----------gaggagg--------------agga------------ggaggaggagg---CAGCCCCTGATGTGATCTTTCAGGAGGACGCCTCCCGCGTCTCTGCTCAGAAGG---CCCCCGAGCTCCGGGGCTCAGAATCACCCAGCCCCAAGCCTGAGTACTCCGTTATTGTGGAGGTCCGCTCGGATGATGACAAGGACGAGGACACCCGCTCCCAGAAGTCAGCAGTCACTGACGAGTCGGAAATGCACGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCTATTGCTCTGAAGGCTGAGCAGGTGCTCACAGTCTGTGAGCCGGGCTGCCCACCTGCCGAGCAGAGCCAGCTGGGCTTGGGAGAGCCAGGGAAAGCAGCAAAGCCCCTGGACACTGTGCGGAAGAGCTACTACAGTAAAGGTAGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1157043 518 + 1231380 ggaggaggaggaggaggag-------------------------------------------------------gaagaggaggaggaggatgaagaagaggaagaggaagaagaggaggagg-aagaggaagaggaggag---------gaagaggaagaggaggaggaggag-gaa---------gaggag-----------gaggagg--------------aaga------------ggaggaggaAG---CAGCTCCTGATGTGATCTTTCAGGAGGATACCTCCCACATCTCTATCCAGAAGG---CCCCTGAGCTCCGGGGCCCAGATTCACCCAGTCCCAAGCCTGAGTACTCTGTTATCGTGGAGGTCCGCTCGGATGATGACAAGGATGAGGACACCCACTCCCAGAAGTCAACAGTCACTGACGAGTCGGAAATGCACGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAAGCCATTGCTCTGAAGGCTGAGCAGGTGCACACAGCCTGTGAGCCGGGCTGCCCGCCTGCCGAGCAGAGCCAGCTGGGCCTGGGAGAGCCAGGGAAAGCAGCAAAGCCCCTGGACACTGTGCGGAAGAGCTACTACAGTAAAGGTAGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2689413 553 + 11732439 ggaagaggatgaggaggaggaggaggag----------------------------------------------gaagaggaggagaggaggagagaagaggaagaggaagaggaggaggagg-aagaggaggaggaggaa---------gaggaggaggaggaggaagaggagagag---------gaggggatggagattatgaggaggtatttggaggagaaagga------------ggaagaggagg---CAGCCCCTGATGTGATCTTTCAGGAGGACGCCTCCCACATCTCTGCCCAGAAGG---CCCCTGAGCTCCGGGGCCCAGAATCACCCAGTCCCAAGCCTGAGTTCTCTGTTATCGTGGAGGTCCGCTCGGATGATGGCAAGGACGAGGACACCCACTCCCAGAAGTCAACAGTCACCGACGAGTCGGAAATGCATGACATGATGACCCGGGGAAACCTGGGCCTCCTGGAGCAGGCCATCGCTCTGAAGGCTGAGCAGGTGCGCACAGTCTGTGAGCCGGGCTGCCCGCCTGCCGAGCGGGGCCAGTTGGGCCTGGGAGAGCCAGTGAAGGCGGCAAAGCCCCTGGACACCGTGCGGAAGAGCTTCTACAGTAAAGGTAGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56869442 500 + 57149010 ggaggaggaggatgatgag-------------------------------------------------------gaggaggaggacgaggaggaggaggatgaggaggaggaagaggaggagg-aggaggag------------------gaagaaggggaggaagag-------gag---------gaggaa-----------ggggagg--------------aggg------------agaggaggggg---CAGCTGCCGACGTGATCTTCGAGGAGGACGCCGCCCGCGCCTCTGCCCAGAAGG---CccctgagctccggcgcccggagccgcccagccccaagcccgAGTACGCCGTCATCGTGGAGGTCTGCTCGGACGACGACAAGAACGAGGACGCACGCTCCCAGAAGTCGGCGGTCACGGACGAGTCGGAGATGCACGACATGATGACCCGGGGGAACCTGGGCCTCCTGGAGCAGGCCATCGCCCTGAAGGCCGAGCAGGTGCGAGCCGTGTGCGAGCCGG---GCGCCCCCGCGGAGCAGGGCCCGCTGGGCCTGGGCGAGCCAGCGAAGGCGGCGAGGCCCCTGGATGCCGGGCGCAAGAGCTACTACAGCAAAGGTAGGG i micMur3.chr18 C 0 I 235 s proCoq1.NW_012150197v1 1863484 576 - 2029793 ggaggaggaggaggaggaggaggaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaggaggaggaggaggaggaggaggacgaggaggaggaggaggaggacg-aggaggaggaagaggaggaggatgaagaagaaggggaggaagag-------gag---------gaggaa-----------ggggagg--------------aggg------------agaggaggGGG---CAGCTCCCGATGTGATCTTCGAGGAGGATGCTGCCCACGCCTCTGCCCAGAAGG---CCCCTGAGCTCCGGCGCCCAGAGCCACTCAGCCCCAAGCCCGAGTACTCCGTCATTGTGGAGGTCCGCTCGGACGATGACAGGGACGAGGACGCACGCTCCCAGAAGTCAGCGGTCACGGACGAGTCGGAGATGCACGACATGATGACCCGGGGCAACCTGGGCCTCCTGGAGCAGGCCATCGCCCTCAAGGCCGAGCAGGTGCGCGCGGTCTGCGAGCCGGGTCGCCCCTCCGCCGAGCAGAGCCCGCTGGGCCCGGGTGAGCCCGGGAAGGCGGCGAAGCCCCTGGACGCCATGCGGAAGAGCTACTACAGCAAAGGTAGGG i proCoq1.NW_012150197v1 C 0 I 209 s otoGar3.GL873542 22851104 458 + 22939663 ggaggaggaggatgaagaa----------------------------------------------------------------------------------gaggaggaggaaggggaagaag-aggaggag------------------gaggaaggggaagaagag-------gag----------------------------------------------------------------gaagaggGAG---CAGTTCCTAATGTGATCTTCAAGGAGGATGTCTCCCATCCATCTGCCCAGAAGG---GCCCTGAGCTAAGGTGCCCAGAGCCGCTCAGTCCCAAGCCTGAGTATTCTGTCATTGTGGAGGTCCGCTCTGATGATGACAAGGATGAGGATGCACACTCCCAGAAGTCAGAGGTCACAGACGAGCTGGAGATGCATGACATGATGACGCGGGGGAACCTGGGCCTCCTGGAGCAGGCTATTGCCCTGAAGGCCGAGCAGGTGCGAGCCGTCTGTGAGCCTGGCTGCCCGTCTGCTGAGCAGGGCCAACTGGGCATGGGTGAGCCAGGGAAGGCCACGAAGCCCCTGGACACGATGCGGAAGAGCTACTACAACAAAGGTAGGG i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181797462 526 + 182113224 ggaggagggagaggaggaggaagaagatgaa-------------------------------------------gaagaagaggatgaggaggaggaggaggagggagaggaaggagaagaag-aagaggaggaggaggag---------gaagaagaggaggaggaa-------gat---------gaagag-----------gaagagg--------------agga------------ggaggaggaAG---CAGCTCCAAATGTTATCTTTGGGGAAGACACCTCCCATACCTCTGTCCAGAAGGCGTCTCCTGAGTTCCGAGGCCCAGAGCTATCTAGTCCTAAACCTGAGTACTCAGTCATCGTGGAGGTTCGCTCTGATGATGACAAGGATGAGGATTCACGCTCCCAGAAGTCAGCAGTCACAGATGAATCAGAAATGTATGACATGATGACCCGTGGGAATTTAGGCCTTCTGGAACAGGCCATTGCCCTGAAGGCTGAGCAGGTGCGAGCGGTCTGTGAGTCTGGCTGTCCACCTGCTGAGCAGGGCCATCTGGGCCCAGGAGAGCCAGGGAAAATGGCAAAGCCCCTGGACGTGGTGAGGAAGAGCTGCTACAGCAAAGGTAGG- i mm10.chr2 C 0 C 0 s canFam3.chr24 47612513 515 + 47698779 ggaagaagaagaggaggag-------------------------------------------------------gaggaggaggaggaggaagaggaggaagaggaggaggaggaggaggaag-aggaggaggaggaggat---------gaagaggaggaggaggaa-------gag---------gaggtg-----------gaagagg--------------agga------------ggaggaggaggTCCCTGCTCCTGACGTCATCTGCCAGGAGGATGCCCCCCATGCCCCCACCCAGAAGG---CCCCTGAACTCCGGCACCCAGCGTCTCCCAGCCCCAAGCCCGAGTACTCCGTCATAGTAGAGGTGCGTTCTGACGACGGCAAGGACGAAGACTCACACTCCCAGAAGTCTGCGGTCACGGACGAGTCGGAGATGTATGACATGATGACGCGGGGGAACCTGGGTCTCCTAGAGCAGGCCATCGCCCTGAAGGCCGAGCAGGTGCAAGCCGTCTGTGAGCCGGGCTGCCCACCCACCGAGCAGGGCCAGCTGGGCCCTGGAGAACCAGGGAAGGCGGCCAGGCCCCTGGATGCCTCACGGAAGAACTATTGCAGCAAAGGTAGGG i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 247919 451 - 397369 --------------------------------------------------------------------------------GAGGACCCcgaggaggaggaggaggacgaagaggaggagggag-aagaggacgacgaggac---------gag----------------------------------gacgag-----------gacgagg--------------acga------------ggacgaggacg---CCACCCCCGAAGTGATGTGC---GAGGACGCCCCCCGTGCCTCCGCCCACAAGG---CCCCTGAGC------ACCCAGAGCCCCCCAGCCCCAAGCCCGAGCACCCCGTCGTCGTGGAGGTGCGTTCTGACGACGACAAGGACGACGGTGCACACTCCCCGCAGTCGGCCGCCACGGACGTGTCTGAGATGGACGACGTGATGACTCGTGGCAACCTGGGCCTCCTGGAGCAGGCCATCGCCCTGAAGGCGCGGCAGGTGTGCGCGGCCCGCGAGCCGGGCGG---gcagggccagcagggccagcagggccCGGGCGA---CGGGA---CGGCGAGGGCCCTGGACGCCTCGCGGAGGAGCTACTACAGCAAAGGTAGGG i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 110028056 2192 - 110113093 I a score=2689.000000 s hg38.chr20_KI270870v1_alt 117084 2 + 183433 CT- s panTro5.chr20 66443293 2 + 66533130 CT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62118439 2 + 62195757 CT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507616 2 - 578057 CT- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760340 2 - 92844088 GT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96427709 2 + 96509753 GT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899022 2 - 16982598 GT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701335 2 - 3785965 GT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280524 2 - 90373283 GT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85138 2 - 179258 GT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5570937 2 - 5823884 GT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 51756 2 + 372756 GT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16288319 2 + 16356641 GT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1157561 2 + 1231380 GT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2689966 2 + 11732439 GT- i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47613028 2 + 47698779 CT- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 248370 2 - 397369 -CA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1864060 209 - 2029793 I e mm10.chr2 181797988 0 + 182113224 C e micMur3.chr18 56869942 235 + 57149010 I e nomLeu3.chr13 110028056 2192 - 110113093 I e otoGar3.GL873542 22851562 1 + 22939663 I a score=1524779.000000 s hg38.chr20_KI270870v1_alt 117086 213 + 183433 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCATCCTT----TCAC-------------CCCT-----------GCCCCA----------------------------------GGTGTGCAGATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGGGGCTGGGGGATGGCAGAAAAGCAGACAAAAGGACAAATAC--ATGA-CACAGAC-TGTGGTCAGATACTGAGCAAATGGGTTCCCACACTGCTTTACATAGAGCGATCTGGAGCGAGACACAG--CGGAGACGT s panTro5.chr20 66443295 215 + 66533130 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCATCCTT----TCAC-------------CCCT-----------GCCCCA----------------------------------GGTGTGCAGATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGGGGCTGGGGGATGGCAGAAAAGCAGACAAAAGGACAAATAC--ATGA-CACAGAC-TGTGGTCAGATACTGAGCAAATGGGTTCCCACACTGCTTTACATAGAGCGATCTGGAGCGAGACACAGAGCGGAGACGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62118441 215 + 62195757 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCATCCTT----TCAC-------------CCCT-----------GCCCCA----------------------------------GGTGTGCAGATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGGGGCTGGGGGATGGCAGAAAAGCAGACAAAAGGACAAATAC--ATGA-CACAGAC-TGTGGTCAGATACTGAGCAAATGGGTTCCCACACTGCTTTACATAGAGCGATCTGGAGCGAGACACAGAGCGGAGACGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507618 215 - 578057 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCATCCTT----TCAC-------------CCCT-----------GCCCCA----------------------------------GGTGTGCAGATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGGGGCTGGGGGATGGCAGAAAAGCAGACAAAAGGACAAATAC--ATGA-CACAGAC-TGTGGTCAGATACTGAGCAAATGGGTTCCCACACTGCTTTACATAGAGCGATCTGGAGCGAGACACAGAGCCGAGACGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760342 191 - 92844088 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCATCCTT----TCAC-------------CCCT-----------GCCCCA-----------------------------------GTGTGCAAATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGAGGCTGGGAGATGGCAGAAAAGCAGACAAAAGGACAGACAC--A------------TGTGGTCAGATACCGAGCAAATGGGTTCCCACACTGCTTTAC--AGAGCAATC-----------ATAGAGCGGAGACGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96427711 191 + 96509753 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCATCCTT----TCAC-------------CCCT-----------GCCCCA-----------------------------------GTGTGCAAATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGAGGCTGGGAGATGGCAGAAAAGCAGACAAAAGGACAGACAC--A------------TGTGGTCAGATACCAAGCAAATGGGTTCCCACCCTGCTTTAC--AGAGCAATC-----------GTAGAGCGGAGACGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899024 200 - 16982598 ---CA-GGGTGGCCTGGCCCTGCAGAC-----------------TCATCCTT----TCAC-------------CCCT-----------GCCCCA-----------------------------------GTGTGCAAATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGAGGCTGGGAGATGGCAGAAAAGCAGACAAAAGGACAGATAC--ATGA-CACAGAC-TGTGGTCAGATACCGAGCAAATGGGTTCCCACCCTGCTTTAC--AGAGCAATC-----------ATAGAGCGGAGACGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701337 201 - 3785965 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCACCCTT----TCAC-------------CCCT-----------GCCCCA-----------------------------------GTGTACGAATGCAGGCTGAG------------------------AGCCCTTCTGGGACAGGAGGCTGGGAGATGGCAGAAAAGTAGACAAAAGGACAGATAC--ATGA-CACAGAC-TGTGGTCAGATACCGAGCAGATGGGTGCCCACACTGCTTTCC--AGAGCAATC-----------GTAGAGCGGAGACGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280526 201 - 90373283 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCATCCTT----TCAC-------------CCCT-----------GCCCCA-----------------------------------GTGTACAAATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGAGGCTGGGAGATGGCAGAAAAGCAGACAAAAGGACAGATAC--ATGA-CACAGAC-TGTGGTCAGATACTGAGCAAATGGGTTCCCACACTGCTTTAC--AGAGCAATC-----------ATAGAGCGGAGACGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85140 201 - 179258 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCACCCTT----TCAC-------------CCCT-----------GCCCCA-----------------------------------GTGTACGAATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGAGGCTGGGAGATGGCAGAAAAGTAGACAAAAGGACAGATAC--GTGA-CACAGAC-TGTGGTCAGATACCGAGCAGATGGGTTCCCGCACTGCTTTCC--AGAGCAATC-----------GTAGAGCGGAGACGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5570939 199 - 5823884 ---CAGGGGTGGCCTGGCCCTGCAGAC-----------------TCATCCTT----TCAC-------------CCCT-----------GCCCCA-----------------------------------GTGTACAAATGCAGGCTGAG------------------------AGCCCTTCTAGGACAGGAGGCTGGGAGATGGCAGAAAAGCAGACAAAAGGACAGATAC--ATGA-CACAGAC-TGTGGTCAGATACCGAGCAAATGGGTTCCCACACTGCTTTAC--AGAGCAATC-------------AGAGCGGAGACGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 51758 213 + 372756 ---CAGGGGTGGCCTGGTCCTGCACAC-----------------TCATCCTT----TCAC-------------CCC------------GCCCCA----------------------------------GGTGTGCAGATGCA-GCTGAG------------------------AGGCCTTACAGGACAGGGGACTGGGGGAAGGCAGAAAAGCAGACAAAGGGACAAATAC--ATTA-CACAGAC-TGTGGTCAGATACTGAGCAAATGGGCTCCTACACTGCTGTATGTAAAGCAGTCTGAAGAGAGACGCAGAGCTGAGATGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16288321 208 + 16356641 ---CCGGGGTGGCCTGGTCCCACACAC-----------------TCATCCTT----TCAC-------------CCC------------ACCCCA----------------------------------GCTGTGCAGATGCAGGCTGAG------------------------AGGCCTCACAGGACAGGGGACTGGGGGAAGGCAGAAAAGCAGACAAAGGGACAAATGC--ATAC-CACAGAC-TGTGGTCAGATACTGAGCAAATGGGCTCCTACATTGCCGTACATAAAGCCGTCCGGAGAGAGACACAGAGCTG------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1157563 205 + 1231380 ---C--GGGTGGCCTGGTTCTGCACAC-----------------CCATCCTT----TCAG-------------CCT------------GCCCCA----------------------------------GGTGTGCAGGTACAGGCTAAG------------------------AGGCCTTACAGGACAGGGGACTGGGGGAAGGCAGAAAAGCAGACAAA-GGACAAACAC--ATAA-CACAGAC-TGTGGTTAGATACTGAGCAAATGGGCTCCTACACTGCTGTACATAAAGCAGTCCGGAGAGAGATGCAGAGCTG------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2689968 198 + 11732439 ---CACGGGTGGCCTGGTCCCGCACAC-----------------TCATCCTT----TCAC-------------CCC------------GCCCCA----------------------------------GGTGTGCAGATGCAGGCTGAG---------------------------------AGGACAGGGGACTGGGGGAAGGCAGAAAAGCAGACAAAGGGACAAATGC--ATAA-CACAGAC-TGTGGTCAGATCCTGAGCAGATGGGCTCCTACACTGCT-------AAGCCGTCCGGAGAGAGACGCAGAGCTGAGATGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22851563 218 + 22939663 ---CTGGGGTGGCCTGGCCCTGCACGCCTACCCT----------TCATCCCT----TCTCCAGGGGCATGGCACCCT-----------ACCCCA----------------------------------GGGGTGCAGATGC-------------------------------------TTATAGGTTGGGGGAC-AGGGGAAGGCAGAATAGTAGACGAGGGGACAAACACTAATGA-CCCTGCC-TATGGTCAGAtgctgagggaatgggt----gcactgctttacacagggtgatc-tgggagaggcatggagctgattctc i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181797988 240 + 182113224 ---CTAAAGTGGCCT-GCTCTGATCAC-----------------CCATCACTCTGATCAC-------------CCATTAATAGGGACAACCTCTACT------------------------------GAGAGTGCAGATAGAGGCTGGGGAGAAACATCGCTCATAGCTTATAACCCCTTATAGACTGGAATG--GGAGGAAAACTGAAAAGC--ACTTGAGGATAATAAT--CTCA-GA---AC-TTGGGTCAAAAATTGAGGACATGGACTC--ATACTGTTTTATGTATTGTGATCTGTAG--------AGAGCTGAGATAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47613030 259 + 47698779 -------GGTGGCCTGGCCCTGCGCACGGGCCCTCCTCCCCGCATCCTCCCT----GCGC-------------ACCT-----------GCCCCTCCTCCCCGCATCGGGTAGTGCCCCCCGCCCCCCAGGTATGGAGATGCAGGCTGCG--------GGAGAGGCGGGCCAGAGGCCCTCACAGGCTGG------GGGGGGGGGCCAACAGGTGCAGAAAAGGACAGACAC--ATAATCACAGGC-TGGTTGTTGATACCGAGGAGAAGGACTG--ACGCTG-TCCCCATAGGGTGGTCTAGAGAGAGGCACAG----------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 248372 137 - 397369 GGGTGTGGGGAGCCGGGGCGGGCGGAGG----------------ACACGCCC----CCAG-------------GCCT--------------CCA----------------------------------GGTGGGC------------------------------------------------GGGCGGGAGGCCAGCACCTGAGCGGATGGCAGGTGCAGGGGCCGTTCC--T----CACCGGCACCTGGACGGGAGGTGAGC--------------------------TGGGCCCT--------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1864060 209 - 2029793 I e micMur3.chr18 56869942 235 + 57149010 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=260944.000000 s hg38.chr20_KI270870v1_alt 117299 25 + 183433 -GTGAGAAAGAACCAGGTGGGAGAGA s panTro5.chr20 66443510 25 + 66533130 -GTGAGAAAGAACCAGGTGGGAGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62118656 25 + 62195757 -GTGAGAAAGAACCAGGTGGGAGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507833 25 - 578057 -GTGAGAAAGAACCAGGTGGGAGAGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760533 25 - 92844088 -GTGAGAAAGAACCAGGTGGGAGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96427902 25 + 96509753 -GTGAGAAAGAACCAGGTGGGAGAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899224 25 - 16982598 -GTGAGAAAGAACCAGGTGGGAGAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701538 25 - 3785965 -GTGAGAAAGAACCGGGTGGGAGAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280727 25 - 90373283 -GTGAGAAAGAACCAGGTGGGAGAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85341 25 - 179258 -GTGAGAAAGAACCGGGTGGGAGAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571138 25 - 5823884 -GTGAGAAAGAACCAGGTGGGAGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 51971 25 + 372756 -GTGAGAAAGAACCAGGTGGGAGAGA i calJac3.chrUn_GL286459 C 0 I 396 s saiBol1.JH378156 16288529 16 + 16356641 --------AGAACCAGGTGGGAGA-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1157768 18 + 1231380 --------AGAACCAGGTGGGAGAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690166 23 + 11732439 -GTGAGAAAGAACCAGGTGGGAGA-- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1864269 25 - 2029793 -GTGAGAAGGAGCCAGGTGGCAGAGA i proCoq1.NW_012150197v1 I 209 C 0 s otoGar3.GL873542 22851781 25 + 22939663 -atgcaaaggaaccaggtggcagaga i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181798228 25 + 182113224 -GTGAGAGGAGGCTAGGTAGGGGAGA i mm10.chr2 C 0 I 1 s canFam3.chr24 47613289 17 + 47698779 --------AGCTCCGGGTGGGAGGA- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 248509 24 - 397369 AGTGCGA-GGAGCCCGCTGGAGGGG- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56869942 235 + 57149010 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=61378.000000 s hg38.chr20_KI270870v1_alt 117324 5 + 183433 GGAGG s panTro5.chr20 66443535 5 + 66533130 GGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62118681 5 + 62195757 GGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507858 5 - 578057 GGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760558 5 - 92844088 GGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96427927 5 + 96509753 GGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899249 5 - 16982598 GGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701563 5 - 3785965 GGAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280752 5 - 90373283 GGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85366 5 - 179258 GGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571163 5 - 5823884 GGAGG i colAng1.NW_012114444v1 C 0 C 0 s cebCap1.NW_016107870v1 1157786 5 + 1231380 GGAGG i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1864294 5 - 2029793 GGAGG i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22851806 5 + 22939663 ggagg i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181798254 5 + 182113224 GAAGG i mm10.chr2 I 1 I 4 s canFam3.chr24 47613306 5 + 47698779 GGAGG i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 248533 5 - 397369 GTAGG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56869942 235 + 57149010 I e saiBol1.JH378156 16288545 0 + 16356641 C e calJac3.chrUn_GL286459 51996 396 + 372756 I e aotNan1.NW_018500483v1 2690189 0 + 11732439 C e nomLeu3.chr13 110028056 2192 - 110113093 I a score=387721.000000 s hg38.chr20_KI270870v1_alt 117329 40 + 183433 TGGGAGGGACA--GTGACCCACCCACAGTGAC---T-GGTCACAGC s panTro5.chr20 66443540 40 + 66533130 TGGGAGGGACA--GTGACCCACCCACAGTGAC---T-GGTCACAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62118686 40 + 62195757 TGGGAGGGACA--GTGACCCACCCATAGTGAC---T-GGTCACAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507863 40 - 578057 TGGGAGGGACA--GTGACCCACCCACAGTGAC---T-GGTCACAGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760563 40 - 92844088 TGGGAGGGACA--GTGACCCACCCACAGTGAC---T-GGTCACAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96427932 40 + 96509753 TGGGAGGGACA--GTGACCCACCCACAGTGAC---T-GGTCACAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899254 40 - 16982598 TGGGAGGGACA--GTGACCCACCCACAGTGAC---T-GGTCACAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701568 40 - 3785965 TGGGAGGGACA--GTGACCCACCCACAGTGAC---T-GGTCACAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280757 40 - 90373283 TGGGAGGGACA--GTGACCCACCCACAGTGAC---T-GGTCACAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85371 40 - 179258 TGGGAGGGACA--GTGACCCACCTACAGTGAC---T-GGTCACAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571168 40 - 5823884 TGGGAGGGACA--GTGACCCACCCAGAGTGAC---T-GGTCACAGC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16288545 32 + 16356641 -------GACA--GTGACCCAAC-CTGGTGAC---C-GGTCACAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1157791 39 + 1231380 TGGGAGGGACA--GTGACCCAAC-GCGGTGAC---T-GGTCACAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690189 32 + 11732439 -------GACA--GTGATCCAAC-ACAGCGAC---T-GGTCACAGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56870177 40 + 57149010 TGGGAGGGACA--GTGACCCGGCCACAGTGGC---T-GCTCACAGC i micMur3.chr18 I 235 C 0 s proCoq1.NW_012150197v1 1864300 39 - 2029793 CGGGAGGGACA--GTGA-CCAGCCACAGTGGC---T-GCTCATAGC i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22851812 41 + 22939663 agggagGGACATTGTGA-CCAGCCACAGTGGC---T-GGTCACAGC i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181798263 41 + 182113224 CAGGAGGGCAG--ATAACCCAGTTACTATGTCACTT-GGTCATA-- i mm10.chr2 I 4 C 0 s canFam3.chr24 47613313 41 + 47698779 CTGAGGCTACG--GTGAGCAGGCTCCAGCAGC---TCGGCCACAGC i canFam3.chr24 I 2 I 20 s dasNov3.JH569290 248538 27 - 397369 AGCGGGGAGCC--GTG-----CCGGCAGAGGC---T-T-------- i dasNov3.JH569290 C 0 C 0 e calJac3.chrUn_GL286459 51996 396 + 372756 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=25976.000000 s hg38.chr20_KI270870v1_alt 117369 2 + 183433 AG s panTro5.chr20 66443580 2 + 66533130 AG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62118726 2 + 62195757 AG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507903 2 - 578057 AG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760603 2 - 92844088 AG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96427972 2 + 96509753 AG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899294 2 - 16982598 AG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701608 2 - 3785965 AG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280797 2 - 90373283 AG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85411 2 - 179258 AG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571208 2 - 5823884 AG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16288577 2 + 16356641 AG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1157830 2 + 1231380 AG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690221 2 + 11732439 AG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56870217 2 + 57149010 AG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1864339 2 - 2029793 AG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22851853 2 + 22939663 AG i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47613354 20 + 47698779 I e mm10.chr2 181798304 0 + 182113224 C e dasNov3.JH569290 248565 0 - 397369 C e calJac3.chrUn_GL286459 51996 396 + 372756 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=268964.000000 s hg38.chr20_KI270870v1_alt 117371 25 + 183433 CATCTGGGGTCTGGAGAGGGTGGGG s panTro5.chr20 66443582 25 + 66533130 CATCTGGGGTCTGGAGAGGGTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62118728 25 + 62195757 CATCTGGGGTCTGGAGAGGGTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507905 25 - 578057 CATCTGGGGTCTGGAGAGGGTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760605 25 - 92844088 CATCTGGGATCCGGAGAGGGTGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96427974 25 + 96509753 CATCTGGGATCCGGAGAGGGTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899296 25 - 16982598 CATCTGGGATCCGGAGAGGGTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701610 25 - 3785965 CATCTGGGATCCGGAGAGGGTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280799 25 - 90373283 CATCTGGGATCCGGAGAGGGTGCGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85413 25 - 179258 CATCTGGGATCCGGAGAGGGTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571210 25 - 5823884 CATCTGGGGTCCGGAGAGGGTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52392 25 + 372756 CATCTGCTGTCTGGAGAGGGTGGAG i calJac3.chrUn_GL286459 I 396 C 0 s saiBol1.JH378156 16288579 25 + 16356641 CATCTGCTGTCCGGAGAGGGTGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1157832 25 + 1231380 CATCTGCTTTCTGGAGAGGGTGGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690223 25 + 11732439 CATCTGCTGTCCTGAGAGGGTGGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56870219 25 + 57149010 CATCTGCCGTCTGGACAGGCTGGGG i micMur3.chr18 C 0 I 360 s proCoq1.NW_012150197v1 1864341 25 - 2029793 CATCTGCCGTCTGGAGAGGCTGGGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22851855 25 + 22939663 CATCTGCCCCCTGGAGAGGCTGAGG i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 248565 8 - 397369 ----------------GGGCTGAC- i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47613354 20 + 47698779 I e mm10.chr2 181798304 0 + 182113224 C e nomLeu3.chr13 110028056 2192 - 110113093 I a score=409766.000000 s hg38.chr20_KI270870v1_alt 117396 40 + 183433 ACCGTCCTGTCCCTTCCACCCCAACTCACACTCGTGGCAG s panTro5.chr20 66443607 40 + 66533130 ACCGTCCTGTCCCTTCCACCCCAACTCACACTTGTGGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62118753 40 + 62195757 ACCGTCCTGTCCCTTCCACCCCAACTCACACTCGTGGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507930 40 - 578057 ACCGTCCTGTCCCTTCCACCCCAACTCACACTCGTGGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760630 40 - 92844088 ACTGTCCTGTCCCTTCCACCCCAACTCACACTTGTGGCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96427999 40 + 96509753 ACTGTCCTGTCGCTTCCACCCCAACTCACACTTGTGGCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899321 40 - 16982598 ACTGTCCTGTCCCTTCCACCCCAACTCACACTTGTGGCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701635 40 - 3785965 ACTGTCCTGTCCCTTCCACCCCAACTCACACTTGTGGCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280824 39 - 90373283 ACTGTCCTGTCCCTTCCA-CCCAACTCACACTTGTGGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85438 40 - 179258 ACTGTCCTGTCCCTTCCACCCCAACTCACACTTGTGGCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571235 40 - 5823884 ACTGTCCTGTCCCTTCCACCCCAACTCACACTTGTGGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52417 40 + 372756 ACTGTCCTGTCCCTTCCACCCTGGCACACACTTGTGGCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16288604 40 + 16356641 ACTGTCCCGTTCCTTCCACCCTGATGCACACTTGTGGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1157857 40 + 1231380 ACTGTCCCGTCCCTGCCACCCTGACGCACACTTGTGGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690248 40 + 11732439 ACTGTCCTGTCCCTTCCACCCTGACACGCACTTGTGGCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1864366 38 - 2029793 CCTTTCTTGTCCCTGC--CCCCAACTTACACTTGTGGCAG i proCoq1.NW_012150197v1 C 0 I 362 s otoGar3.GL873542 22851880 39 + 22939663 CCTGTCTTGTGCCAGC-GACCTGACTCATACCTGTGGCAG i otoGar3.GL873542 C 0 I 10 s mm10.chr2 181798304 31 + 182113224 ---ATCCTGTC------ACCCTGGCCTAAACCTGTAGCAG i mm10.chr2 C 0 C 0 s dasNov3.JH569290 248573 26 - 397369 ACCGGCCG--------CACCTGGATGTGCACCTG------ i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56870244 360 + 57149010 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=2172152.000000 s hg38.chr20_KI270870v1_alt 117436 286 + 183433 GGATTGTGCTATGACAGAACCCG---------------------------CTGTTTCCTACAGCCATGCTGGGTCATCCTGA----TCCTCTCGTGGGGTGGAGACCAGCAGGCAGA--TGTGAGGG-----GTGCCCT-TGCTCCTCAGAGGGAGCAG----CctgccgctggctctgcatctgtctctggatttggctctAAAGTGTGCAGGGTACAGGGGAGCCATCCCCTGATCGCACGGAGTGGCTGATGTTGAGGTGAG------GATAGACAAGGAGGGCTGCTTGGAGGGGCCTGGGGCTGGGCTGACGTGGTTGGGGAGCAGCTGG s panTro5.chr20 66443647 286 + 66533130 GGATTGTGCTATGACAGAACCCG---------------------------CTGTTTCCTACAGCCATGCTGGGTCATCCTGA----TCCTCTCGTGGGGTGGAGACCAGCAGGCAGA--TGTGAGGG-----GTGCCCT-TGCTCCTCAGAGGGAGCAG----CctgccgctggctctgcatctgtctctggatttggttctAAAGTGTGCAGGGTACAGGGGAGCCATCCCCTGATCGCACGGAGTGGCTGATGTTGAGGTGAG------GATAGACAAGGAGGGCTGCTTGGAGGGGCCTGGGGCTGGGCTGACGTGGTTGGGGAGCAGCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62118793 286 + 62195757 GGATTGTGCTATGACAGAACCCG---------------------------CTGTTTCCTACAGCCATGCTGGGTCATCCTGA----TCCTCTCGTGGGGTGGAGACCAGCAGGCAGA--TGTGAGGG-----GTGCCCT-TGCTCCTCAGAGGGAGCAG----CCTGCCGCTGGCTCTGCATCTGTCTCTGGATTCGGTTCTAAAGTGTGCAGGGTACAGGGGAGCCATCCCCTGATCGCACGGAGTGGCTGATGTTGAGGTGAG------GATAGACAAGGAGGGCTGCTTGGAGGGGCCTGGGGCTGGGCTGACGTGGTTGGGGAGCAGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 507970 286 - 578057 GGATTGTGCTATGACAGAACCCG---------------------------CTGTTTCCTACAGCCATGCTGGGTCATCCTGA----TCCCCTCGTGGGGTGGAGACCAGCAGGCAGA--TGTGAGGG-----GTGCCCT-TGCTCCTCAGAGGGAGCAG----CctgccgctggctctgcatctgtctctggatttggctctAAAATGTGCAGGGTATAGGGGAGCCATTCCCTGATTGCACGGAGTGGCTGATGTTGAGGTGAG------GATAGACAAGGAGGGCTGCTTGGAGGGGCCTGGGGCTGGGCTGACGTGGTTGGGGAGCAGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760670 265 - 92844088 GGATTGTGCTATGACAGAACCCG---------------------------CTGTTTCCTACGGCCATGCTGGGCCATCCTGA----TCCTCTCGTGGGGTGGAGCCCAGCAGGCAGA--GGTGAGGG-----GTGCCCT-T-CTCCTCAGAGGAAGCAG----Cctgccgctggctctgcatctg-ctctggatttggctctAAAGTGTGCAGGGTATAGGGGAGGCATCCCCTGACTGCACTGAGTGGCTGATGTTGAGGTGAG------GACAGACAAGGAGGGCTGCTTGGAGGGGCTTGGGACTGGGCTGAC------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428039 265 + 96509753 GGATTGTGCTATGACCGAACCCG---------------------------CTGTTTCCTACGGCCATGCTGGGCCATCCTGA----TCCTCTCGTGGGGTGGAGCCCAGCAGGCAGA--GGTGAGGG-----GTGCCCT-T-CTCCTCAGAGGAAGCAG----Cctgccgctggctctgcatctg-ctctggatttggctctAAAGTGTGCAGGGTATAGGGGAGGCATCCCCTGACTGCACTGAGTGGCTGATGTTGAGGTGAG------GACAGACAAGGAGGGCTGCTTGGAGGGGCTTGGGACTGGGCTGAC------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899361 265 - 16982598 GGATTGTGCTATGACAGAACCCG---------------------------CTGTTTCCTACGGCCATGCTGGGCCATCCTGA----TCCTCTCGTGGGGTGGAGCCCAGCAGGCAGA--GGTGAGGG-----GTGCCCT-T-CTCCTCAGAGGAAGCAG----Cctgccgctggctctgcatctg-ctctggatttggctctAAAGTGTGCAGGGTATAGGGGAGGCATCCCCTGACTGCACTGAGTGGCTGATGTTGAGGTGAG------GACAGACAAGGAGGGCTGCTTGGAGGGGCTTGGGACTGGGCTGAC------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701675 265 - 3785965 GGATTGTGCTATGACAGAACCCG---------------------------CTGTTTCCTACAGCCGTGCTGGGTCATCCTGA----TCCTCTCGTGGGGTGGAGCCCAGCAGGCAGA--GGTGAGGG-----GTGCCCT-T-CTCCTCAGAGGAAGCAG----Cctgccgctggctctgcatctg-ctctggatttggctctAAAGTGTGCAGGGTATAGGGGAGGCATCCCCTGACCGCACTGAGTGGCTGATGTTGAGGTGAG------GACAGACAAGGAGGGCTGCTTGGAGGGGCTTGGGACTGGGCTGAC------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90280863 262 - 90373283 GGATTGTGCTATGACAGAACCCG---------------------------CTGTTTGCTACAGCCATGCTGGGTCCTCCTGA----TCCTCTCGTGGGGTGGAGCCCAGCAGGCAGA--GGTGAGGG-----GTGCC-----CTCCTCAGAGGAAGCAG----Cctgccgctggctctgcatctg-ctctgggtttggctctAAAGTGTGCAGGGTATAGGGGAGGCATCCGCTGACCGCACTGAGTGGCTGATGTTGAGGTGAG------GACAGACAAGGAGGGCTGCTTGGAGGGGCTTGGGACTGGGCTGAC------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85478 260 - 179258 GGATTGTGCTATGACAGAACCCG---------------------------CTGTTTCCTACAGCCATGCTGGGTCATCCTGA----TCCTCTC-----GTGGAGCCCAGCAGGCAGA--GGTGAGGG-----GTGCCCT-T-CTCCTCAGAGGAAGCAG----Cctgccactggctctgcatctg-ctctggatttggctctAAAGTGTGCAGGGTATAGGGGAGGCATCCCCTGACCGTACTGAGTGGCTGATGTTGAGGTGAG------GACAGACAAGGAGGGCTGCTTGGAGGGGCTTGGGACTGGGCTGAC------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571275 264 - 5823884 GGATTGTGCTATCACAGAACCCG---------------------------CTGTTCCCTACAGCCGTGCTGGGTCATCCTGA----TCCTCTCATGGGGTGGAGCCCAGCAGGCAGA--GGTGTGGG-----GTGCCCT-T-CTCCTCAGAGGAAGCAG----CCTGCCGCTGGCTCTGCATCTG-C-CTGGATTTGGCTCTAAAGTGTGCAGGGTATAGGGGCGGCATCCCCTGACCGCACTGAGTGGCTGATGTTGAGGTGAG------GACAGACAAGGAGGGCTGCTTGGAGGGGCTTGGGACTGGGCTGAC------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52457 266 + 372756 GGTTTGTGCTGTGACAGAGCCCG---------------------------CTGTTTCCGACAGCCACGCTGGGTCTTCCTGA----CCCTCTTGTTGGGTGGAGACCTGCAGGCAGA--TGAGAGGG-----GTGCCCT-TGCTCCTCAGTGGGAGCAG----CCTGCCACTGGCTCTGCATCTGCCTCTGGATTTGGCCCTAAAGCATGCAGGGCATAGGGGAGGCATCCCT-TGCCATACTGAGTGCCTAATGTTGAGGTGAG------GATAGGCAAGGAGGGCTGCTGGGAGTGGCCTGGGGCCGGGCGGAA------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16288644 230 + 16356641 GGATTGTGCTGTGACA------------------------------------------------------GGGTCATCCTGA----CCCTCTTGTTGGGTGGAGACCTGCAGGCAGA--TGTGAGGG-----CTGCCCTGGGCTCCTCAGCAGGA-----------GCCGCTGGCTCTGTGTCTGCCTCTAGATTTGGCCCTAAAGCATGCAGGGCCTAGGGGAGGCATCCCC-AGCCGTACTGAGTGCCTGATGTGGAGGTAAG------GATAGACAAGGAGGGCTGCTGGGAGTGGCCT--GGCCGGGT-GAC------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1157897 264 + 1231380 GGATTGTGCTGTGACAGAGCCCA---------------------------CTGTTTCTGACAGCCATGCTGGGTCATCCTGA----CCCTCTTATTGGGTGGAGACCTGCAGGCCGA--TGTGAGGG-----CTGCCCTGGGCTCCTCAGCGGGAGCAG----CCTGCCACTGGCTCTGCATCTGCCTCCGGATTTGGCCCTAAAGCACGCAGGGCAT-GGGGAGGCATCCC--GGCCGTACTGAGTGCCTGATGTTGAGGTAAC------GATAGACAGGGAGGGCTTCTGGGAGTGGCCTGGGGCCGGGT-GGC------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690288 264 + 11732439 GGGTTGTGCTATGACAGAGCCCG---------------------------CTGTTTGCGACAGCCATGCTGGGTCATCCTGA----CCCTCTTGTTGGGTGGGGACCTGCAGGCCAA--TGTGAGGG-----GTCCCCT-TGCTCCTCAGCGGGAGCAG----ACTGCCGCTCGCTCTGCATCCGCCTCT-GATTTGGCCCTAAAGCATGCAGGGCAT-GGGGAGGCATCCCC-GGCCGTACCGAGTGCCTGATGTTGGGGTAAG------GATAGACAAGGAGGGCTGCTGGGAGTGGCCTGGGGCTGGGCTGAC------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22851929 259 + 22939663 CAACTGTCTTCAGCCCTGGAAAG---------------------------CTGCTTTCTATAGCCATGCTGGGTCATCTTGA----CCCTCTTTTGAGGTTGAGACCAGCAGGCAGA--TATCAGCATGTCTGTCCCTT-GTTTGTCTGGAAGGAGCAG----CCTCCTGCTGGCTCTGCCTCTGTCTCTGGATTTTGCCCTAAATTAAGCAGTGTGT----------CACCCTGGCC--------TGGCTGACATCTTGGTGAGATAGTCAGTAGTCAGGTGGGACCTCTGGAAGGGGCTTAGG-CTGGGTTGAT------------------- i otoGar3.GL873542 I 10 C 0 s mm10.chr2 181798335 256 + 182113224 AGATTGTCCAGTGACAGATCCTGACATTTGATGACTTCAACCCTTGAAAACTGTTT-TTAAGGCCATATTTAATCATCCTCAGCACTTTCTCCATAGAGTTGTGACCTCCAAGCTGA--TTTGAGTC-----ATCTCTC-T-----------------------------CTTGCTC---------CTCTGGATTT----------------------ATGGGCAGAATCAGCTAGCTTCACTGAGTAGCTTATGTCTAGAAGAG------GACAGGAAGACTGGGCTAGTGTAAGGGATCTGGT-CTGGATTGAT---ATAGGAGAGAGGCTGG i mm10.chr2 C 0 I 815 s dasNov3.JH569290 248599 200 - 397369 -------------------CCTT---------------------------CCGGTTTGCACAGCAGGGCTGGGGCATCCCTG----CCCTCT-------------CCAGGAGGCAGCCTGGCCAGGC-----GGGCCCC---------AGGGGGCGTGGGTGTCTTGCTGCTGGCCCCGCCTCTGCCTC--------------AGCCGTGCAGGGTGAAGGAGAGACGCCCCC-AGCCTCACGGAGTGGCCCGTGCCGAGGCGAG------GATGGTCA-GGTGGGCTGCGGGGAAGGG------------------------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1864404 362 - 2029793 I e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56870244 360 + 57149010 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=312967.000000 s hg38.chr20_KI270870v1_alt 117722 46 + 183433 GAAGCAGCTGATGTGGTTGGGGAGCAGCTGGGAGCCTGGAGTGCTG s panTro5.chr20 66443933 46 + 66533130 GAAGCAACTGATGTGGTTGGGGAGCAGCTGGGAGCCTGGAGTGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119079 46 + 62195757 GAAGCAGCTGATGTGGTTGGGGAGCAGCTGGGAGCCTGGAGTGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508256 46 - 578057 GAAGCAGCTGATGTGGTTGGGGAGCAGCTGGGAGCCTGGAGTGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760935 34 - 92844088 ------------ATGGTTGGGGAGCAGCTGGGAGCCTGGAGTGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428304 34 + 96509753 ------------ATGGTTGGGGAGCAGCTGGGAGCCTGGAGTGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899626 34 - 16982598 ------------ATGGTTGGGGAGCAGCTGGGAGCCTGGAGTGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701940 34 - 3785965 ------------ATGGCTGGGGAGCAGCTGGGAGCCTGGAGTGCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281125 34 - 90373283 ------------ATGGTTGGGGAGCAGCTGGGAGCCTGGAGTGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85738 34 - 179258 ------------ATGGTTGGGGAGCAGCTGGGAGCCTGGAGTGCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571539 34 - 5823884 ------------ATGGTTGGGGAGCAACTGGGAGCCTGGAGTGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52723 34 + 372756 ------------GTGGTTGGGGAGCAACTGGGAGCTTGGAGTGCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16288874 34 + 16356641 ------------ATGGTTGGGGAGCAGCTGGGAGCTCAGAGTGCCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158161 34 + 1231380 ------------ATGGCTGGGCAACAGCTGGGAGCTTGGAGTGCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690552 34 + 11732439 ------------ATGGTTGGGGAGCAGCTGGGAGCTTGGAGTGCTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22852188 33 + 22939663 ------------ATGGTTGAGGAGAGGCTGGGAGCCTGGAGGGCC- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 248799 9 - 397369 --------------------------GCTGGAGGC----------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1864404 362 - 2029793 I e canFam3.chr24 47613354 20 + 47698779 I e mm10.chr2 181798591 815 + 182113224 I e micMur3.chr18 56870244 360 + 57149010 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=426768.000000 s hg38.chr20_KI270870v1_alt 117768 47 + 183433 AGGTCTGAGGACGAATCCTGAGTAAACGGTTACGGCCTTCATTGTTA s panTro5.chr20 66443979 47 + 66533130 AGGTCTGAGGACGAATCCTGAGTAAACGGTTACGGCCTTCATTGTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119125 47 + 62195757 AGGTCTGAGGACGAATCCTGAGTAAACGGTTACGGCCTTCATTGTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508302 47 - 578057 AGGTCTGAGGACGAATCCTGAGTAAACGGTTACGGCCTTCATTGTTA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92760969 47 - 92844088 AGGTCTGAGGACGAATCCTGAGTGAACGGTTGCGGCCTTCACTGTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428338 47 + 96509753 AGGTCTGAGGACGAATCCTGAGTGAACGGTTGCGGCCTTCACTGTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899660 47 - 16982598 AGGTCTGAGGACGAATCCTGAGTGAACGGTTGCGGCCTTCACTGTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3701974 47 - 3785965 TGGTCTGAGGACGAATCCTGAGTGAACGGTTGCGGCCTTCACTGTTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281159 47 - 90373283 AGCTCTGAGGACGAATCCTGAGTGAATGGTTGCAGCCTTCACTGTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85772 47 - 179258 TGGTCTGAGGACGAATCCTGAGTGAACGGTTGCGGCCTTCACTGTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571573 47 - 5823884 AGGTCTGAGGACGAATCCTGGGGGAACGGTTGCGGCCTTCACTGTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52757 47 + 372756 AGGTCTGAGGATGGATTCTGAGTAAATGGTTGTGGCCTTCATTGTTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16288908 47 + 16356641 AGGTCTGAGGATGGATTCTGAGTAAATGGTTGTGGCCTTCTTTGTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158195 47 + 1231380 AGGTCTGAGGATGGACTCTGAGTAAATGGTTGTGGCCTTCATTGTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690586 47 + 11732439 AGGTCTGAGGATGGATTCTGAGTCAATGGTCGTGGCCTTCATTGTTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22852221 39 + 22939663 AGGTCTGAGGACAGATTCCAGGCAAGCA--------CTCCACTGTTA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181799406 46 + 182113224 AGATCTAAGGATGGACTTTGAACAAATG-TTATGGCCATAGCTATAG i mm10.chr2 I 815 C 0 s dasNov3.JH569290 248808 15 - 397369 -------AGAAGGACTCCTGAG------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1864404 362 - 2029793 I e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56870244 360 + 57149010 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=408830.000000 s hg38.chr20_KI270870v1_alt 117815 30 + 183433 CTGGGGTGTCAGGGTCTGGACAACAGGCTG s panTro5.chr20 66444026 30 + 66533130 CTGGGGTGTCAGGGTCTGGACAACAGGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119172 30 + 62195757 CTGGGGTGTCAGGGTCTGGACAACAGGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508349 30 - 578057 CTGGGGTGTCAGGGTCTGGACAACAGGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92761016 30 - 92844088 CTGGGGTGTCAGGGTCTGGACAGCAGGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428385 30 + 96509753 CTGGGGTGTCAGGGTCTGGACAGCAGGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899707 30 - 16982598 CTGGGGTGTCAGGGTCTGGACAGCAGGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702021 30 - 3785965 CTGGGGTGTCAGGGTCTGGACAGCAGGCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281206 30 - 90373283 CTGGGGTGTCAGGGTTTGGACAGCAGGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85819 30 - 179258 CTGGGGTGTCAGGGTCTGGACAGCAGGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571620 30 - 5823884 CTGGGGTGTCAGGGTCTGGACAGCAGGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52804 30 + 372756 CTGGGGTGTCAGGGTCTGGACAACAGGCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16288955 30 + 16356641 ATGGGGTGTCAGGGTCTGGGCAACAGGCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158242 30 + 1231380 CTGGGGTGTCAGGGTCTGGACAACAGGCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690633 30 + 11732439 CTGGGGTGTCAGGGTCTGGACAACAGGCCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56870604 30 + 57149010 CTGGGGAGTCAGGGTCTGGACCACAGGCTG i micMur3.chr18 I 360 I 265 s proCoq1.NW_012150197v1 1864766 30 - 2029793 CTGGGGTGTCAGGGTCTGGACAACAGGCTG i proCoq1.NW_012150197v1 I 362 I 64 s otoGar3.GL873542 22852261 30 + 22939663 CTGGAGGGTCAGGGTCTGAACAATGGGCTG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181799452 29 + 182113224 CACGGACACCA-AATTTGTAGAGCAGGCTG i mm10.chr2 C 0 C 0 s dasNov3.JH569290 248823 9 - 397369 ---------------------ACCAGGCCG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47613354 20 + 47698779 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=499783.000000 s hg38.chr20_KI270870v1_alt 117845 56 + 183433 GCTCTGC----TCTGCTGACTGCCCATCTCAGATTCCTCC-TG------GGACAGGGGTCTGGGGAG s panTro5.chr20 66444056 56 + 66533130 GCTCTGC----TCTGCTGACTGCCCATCTCAGATTCCTCC-TG------GGACAGGGGCCTGGGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119202 56 + 62195757 GCTCTGC----TCTGCTGACTGCCCATCTCAGATTCCTCC-TG------GGACAGGGGCCTGGGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508379 56 - 578057 GCTCTGC----TCTGCTGACTGCCCATCTCAGATTCCTCC-TG------GGACAGGGGCCTGGGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92761046 57 - 92844088 GCTCTGC----TCTGCTGACTGCCCATCTCGGATTCCTCCTTG------GGACAGGGGCCTGGGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428415 57 + 96509753 GCTCTGC----TCTGCTGACTGCCCATCTCGGATTCCTCCTTG------GGACAGGGGCCTGGGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899737 57 - 16982598 GCTCTGC----TCTGCTGACTGCCCATCTCAGATTCCTCCTTG------GGACAGGGGCCTGGGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702051 57 - 3785965 GCTCTGC----TCTGCTGACTGCCCATCTCAGATTCCTCCTTG------GGACAGGGGCCTGGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281236 57 - 90373283 GCTCTGC----CCTGCTGACTGCCCATCTCAGATTCCTCCTTG------GGACAGGGGCCTGGGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85849 52 - 179258 GCT---------CTGCTGTCTGTCCATCTCAGATTCCTCCTTG------GGACAGGGGCCTGGGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571650 57 - 5823884 GCTCTGC----TCTGCTGACTGCCCATCTCAGATTCCTCCTTG------GGACAGGGGCCTGGGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52834 57 + 372756 GCTCTGC----TCTGCAGACTGCCCACCTCAGATTCCTCCTTG------GGACAGGAGTCTGGGGTG i calJac3.chrUn_GL286459 C 0 I 7 s saiBol1.JH378156 16288985 50 + 16356641 G-----------CTGCAGACTGCCCATGTCAGATTCCTCCTTG------GTACAGGGGCCTGGGGTG i saiBol1.JH378156 C 0 I 7 s cebCap1.NW_016107870v1 1158272 57 + 1231380 GCTCTGC----TCTGCACACTGCCCGTCTCAGATGCCTcctgg------ggacaggggcctggggtg i cebCap1.NW_016107870v1 C 0 I 7 s aotNan1.NW_018500483v1 2690663 57 + 11732439 GCTCTGC----TCTGAAGCCTGCCCATCTCAGATCCCTCCTTG------GGACAGGGGCCGGGGGTG i aotNan1.NW_018500483v1 C 0 I 7 s otoGar3.GL873542 22852291 62 + 22939663 GCTCTGG----CCTGCTGACTGCCTATCTCAAGTACCTCCTAGGCCCAAGGACAGGGGACGGGGAA- i otoGar3.GL873542 C 0 I 7 s mm10.chr2 181799481 51 + 182113224 GCCATGTGACGCTTGCAATCTGCTCTTTTCAAGTGTCTCCTTG------CCTCAGAG---------- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 248832 53 - 397369 GCTCTGC----CCGGT---CTGCCCATCTCAAGTGTCTGCTTG------ACCTGAGGGCTGGGGAC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1864796 64 - 2029793 I e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56870634 265 + 57149010 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=175923.000000 s hg38.chr20_KI270870v1_alt 117901 14 + 183433 CAGGGCTGGCCAGG s panTro5.chr20 66444112 14 + 66533130 CAGGGCTGGCCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119258 14 + 62195757 CAGGGCTGGCCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508435 14 - 578057 CAGGGCTGGCCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92761103 14 - 92844088 CAGGGCTGGCCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428472 14 + 96509753 CAGGGCTGGCCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899794 14 - 16982598 CAGGGCTGGCCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702108 14 - 3785965 CAGGGCTGGCCAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281293 14 - 90373283 CAGGGCTGGCCAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85901 14 - 179258 CAGGGCTGGCCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571707 14 - 5823884 CAGGGCTGGCCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52898 14 + 372756 CAGGGCTGGCCAGG i calJac3.chrUn_GL286459 I 7 C 0 s saiBol1.JH378156 16289042 14 + 16356641 CAGGGCTGGCCAGG i saiBol1.JH378156 I 7 C 0 s cebCap1.NW_016107870v1 1158336 14 + 1231380 cagggctggccagg i cebCap1.NW_016107870v1 I 7 C 0 s aotNan1.NW_018500483v1 2690727 14 + 11732439 CAGGGCTGGCCAGG i aotNan1.NW_018500483v1 I 7 C 0 s proCoq1.NW_012150197v1 1864860 14 - 2029793 CAGGGTTGGCCAGG i proCoq1.NW_012150197v1 I 64 C 0 s otoGar3.GL873542 22852360 14 + 22939663 CATGGTTGGCCTGG i otoGar3.GL873542 I 7 C 0 s mm10.chr2 181799532 11 + 182113224 CAGG--TGCACAG- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 248885 11 - 397369 AAGGGCT---CAGG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56870634 265 + 57149010 I e nomLeu3.chr13 110028056 2192 - 110113093 I a score=147803.000000 s hg38.chr20_KI270870v1_alt 117915 11 + 183433 GGCTGCTCCCT s panTro5.chr20 66444126 11 + 66533130 GGCTGCTCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119272 11 + 62195757 GGCTGCTCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508449 11 - 578057 GGCTGCTCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030248 11 - 110113093 GGCTGCTCCCT i nomLeu3.chr13 I 2192 C 0 s rheMac8.chr10 92761117 11 - 92844088 GGCTGCTCCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428486 11 + 96509753 GGCTGCTCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899808 11 - 16982598 GGCTGCTCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702122 11 - 3785965 GGCTGCTCCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281307 11 - 90373283 GGCTGCTCCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85915 11 - 179258 GGCTGCTCCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571721 11 - 5823884 GGCTGCTCCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52912 11 + 372756 GGCTGCTCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289056 11 + 16356641 GGCTGCTCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158350 11 + 1231380 ggcTGCTCCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690741 11 + 11732439 GGCTGCTCCCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1864874 11 - 2029793 GGCTGCTCCCT i proCoq1.NW_012150197v1 C 0 I 92 s otoGar3.GL873542 22852374 8 + 22939663 GGCTGTTC--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181799543 11 + 182113224 AGCGTCTTCCC i mm10.chr2 C 0 C 0 s dasNov3.JH569290 248896 6 - 397369 -----ATCCAC i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56870634 265 + 57149010 I a score=627314.000000 s hg38.chr20_KI270870v1_alt 117926 73 + 183433 CAGTGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGACCCAGCC--GGCCTGGTGCGGAGGGCCT s panTro5.chr20 66444137 73 + 66533130 CAGTGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGACCCAGCC--GGCCTGGTGCGGAGGGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119283 73 + 62195757 CAGTGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGACCCAGCC--GGCCTGGTGCAGAGGGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508460 73 - 578057 CAGTGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGACCCAGCC--GGCCTGGTGCGGAGGGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030259 73 - 110113093 CAGTGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGACCCAGCT--GGCCTGGTGCCGAGGGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761128 73 - 92844088 CAGCGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGGCTTACCT--GGCCTGGTGCAGAGAACCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428497 73 + 96509753 CAGCGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGGCTTACCT--GGCCTGGTGCAGAGAACCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899819 73 - 16982598 CAGCGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGGCTTACCT--GGCCTGGTGCAGAGAACCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702133 45 - 3785965 CAGTGAgccat--------gccagggaggccaggccttggacaggtcagCTTT------------------------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281318 71 - 90373283 CAGTGAGCCAT--------GCCAGGGAGGTCAGGCCTTGGACAGTTCAGCTTTGGCTCACCC--GGCCTGGTGCAGAGAG--G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85926 73 - 179258 CAGTGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGGCTCACCT--GGCCTGGTGCAGAGAACCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571732 73 - 5823884 CAGTGAgccat--------gccagggaggccaggccttgggcaggtcagCTTTGGCTCACCC--GGCCTGGTGCAGAGAACCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52923 73 + 372756 TGGTGAGCCAT--------GCCAGTGAGGCCAGGCCTTGGACAGGTCAGCTTTGGCCCACTG--GGCCTGGCACAGGGGGCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289067 72 + 16356641 TGGTCAGCCAT--------GCCAGGGAGGCCAGGCCTTGGCCAGGTCAGCTTTGGCCCACTG--GGCCTGGTGC-GGGGGCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158361 73 + 1231380 TGGTGAgccat--------gccagggaggccaggccttggacaggtcagCTTTGGCCCACTG--GGCCTGGTGCGGGGGGCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690752 49 + 11732439 TGATGAGCCAT--------GCCAGGGAGGCCAGGCCTTGGA--------------------------CTGGTGCAGGGGGCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22852382 53 + 22939663 -------CCGT--------GCCAGGGAGGCCAGGTCTGGGACAGGTTGGCTTGGA-------------TGCTGT-GTGTACC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181799554 69 + 182113224 AGGAGAGTCATCACCACAATGCAAGAAGGCCAGTCCTTAGATAGGCCAGCTTTGAATTGCCCTGGGTTT-------------- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 248902 59 - 397369 TAAGGACAGGT--------GTCCGG--GGCTCGGCCCTG------------CTAGCCCCCTC--AGCCTGGTGCCAAGGGCCC i dasNov3.JH569290 C 0 I 2 e proCoq1.NW_012150197v1 1864885 92 - 2029793 I e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56870634 265 + 57149010 I a score=998647.000000 s hg38.chr20_KI270870v1_alt 117999 108 + 183433 CCTGCACCTGGGCACTTGGCCTCTATTCTCCTAAGACTAGGGACCTGCCCTGATCTCGGCCTCTTTTTTCCCC-ATGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG s panTro5.chr20 66444210 108 + 66533130 CCTGCACCTGGGCACTTGGCCTCTATTCTCCTAAGACTAGGGACCTGCCCTGATCTCGGCCTCTTTTTTCCCC-ATGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119356 108 + 62195757 CCTGCACCTGGGCACTTGGCCTCTATTCTCCTAAGACTAGGGACCTGCCCTGATCTCGGCCTCTTTTTTCCCC-ATGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508533 108 - 578057 CCTGCACCTGGGCACTTGGCCTCTATTCTCCTAAGACTAGGGACCTGCCCTGATCTCGGCCTCTTTTTTCCCC-ATGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030332 107 - 110113093 CCTGCACCTGGGCATTTGGCCTCTATTCTCCTAAGACTAGGGACCTGCCCTGACCTCGGCCTCTTTTTTCCCC-ATGTCTAGTCCTGCATCTCTTCTCCAGGT------GGCC----------------------------------------------------------------------------------------------------G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761201 108 - 92844088 TCTGCACCTGGGCACTTGGCCTCTCTTCTCCTAAGACTAGGGACCTGCCCGGACCTCAGCCTATTTTTTCCGC-ACGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428570 108 + 96509753 TCTGCACCTGGGCACTTGGCCTCTCTTCTCCTAAGACTAGGGACCTGCCCGGACCTCAGCCTATTTTTTCCGC-ACGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16899892 108 - 16982598 TCTGCACCTGGGCACTTGGCCTCTCTTCTCCTAAGACTAGGGACCTGCCCGGACCTCAGCCTATTTTTTCCAC-ACGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702178 98 - 3785965 ----------GGCACTTGGCCTCTCTTCTCCTAAGACTAGGGACCTGCCCGGACCTCAGCCTATTTTTTCCCC-ACGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281389 206 - 90373283 TACGCACCTGGGCACTTGGCCTCTCTTCTCCTAGGACAAGGGACCTGCCC-GACCTCAGCCTATTTTTTCCCC-ACGTCTAGTCCTGCGTCTCTTCTCCAGGT------GGACAGGGCGGTGGGAGTTCGTGGCACTGTTCCGATGAGTGCCCCCAGGAAGGGTTAGCTGAGACCAGGGAGGGGCAGATCTTCCGATGAGTGCCCCCAGGAAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 85999 108 - 179258 TCTGCACCTGGGCACTTGGCCTCTCTTCTCCTAAGACTGGGGACCTGCCCGGACCTCAGCCTATTTTTTCCCC-ACGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571805 108 - 5823884 TCTGCACCTGGGCACTTGGCCTCTCTTCTCCTAAGAGTAGGGACCTGCCCGGACCTCAGCCTATTTTTTCCCC-ACGTCTAGTCCTGCATCTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 52996 104 + 372756 CCTGCAGGTGGGCACCTGGCCTCTGCTCTCTTGAGACT--GGAGCTGCCCTGACCTCGGTCTC--TTTTCCCT-GATTCCAGTTCTTCATGTCTTCTCCAGGT------GGAC---------------------------------------------------------------------------------------------------AG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289139 104 + 16356641 CCTGCACGTGGGCACCTGGCCTCTGCTCTCCTGAGACT--GGAGCTGCCCTGACCTCGGTCTC--TTTTTCCT-GCTTCCAGTCCTTCATCTCTTCTCCAGGC------GGAC---------------------------------------------------------------------------------------------------AG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158434 104 + 1231380 CCTGCATGTGGGCACCTGGCCTATGCTCTCCTGAGACT--GGAGCTGCCCTAATCTTGGTCTC--TTTTCCCT-GCTTCCAGTCCTTCATCTCTTCTCCAGGC------GGAC---------------------------------------------------------------------------------------------------AG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690801 104 + 11732439 CCTGCACGTGGGCACCTGGCCTCTGCTCTCCTGAGACT--GGAGCTGCCCTGACCTCGGTCTC--TTTTCCCT-GCTTCTAGTCCTTCATCTCTTCTCCAGGC------GGAC---------------------------------------------------------------------------------------------------AG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1864977 108 - 2029793 CCTGCACCTGGACACTTGGACTCCATTCTCTTAAGACCAGGGAGCTGCTCTGACCTCAGTCTCTTCTTTCCCT-ACCCCTAGTCCGGCCTCTCTTCTCTAGGTGGGTTT--------------------------------------------------------------------------------------------------------- i proCoq1.NW_012150197v1 I 92 C 0 s otoGar3.GL873542 22852435 92 + 22939663 ACCATACCTGGATGC-----------TCTCCTAAAGTCATGCAGCTGCTCTGACTGTGGTCTCTTCTTTCCCTCCCCCCTAGTCCAGCCTCTCTTCTCTAGGT--------------------------------------------------------------------------------------------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181799623 96 + 182113224 -----CCCTAGGCCTGATACCTCTACTC---TAAGATCAGGGAGCTGTCCTGACTTCAGTCTTCTCTTTCCCT-GT-CCCAGGCAAAACTTTCTTCTCTGGGT------CAA------------------------------------------------------------------------------------------------------ i mm10.chr2 C 0 C 0 s dasNov3.JH569290 248963 96 - 397369 CCTGCACCTGGA------GCCTCT--TTGCCAGGGACCGGGGAGCTGGTCCAGCCACAGCATCTCCCCTCCCA-GC-TCTGGTCAGAGCTGACCTCTCTTGGG------CGG------------------------------------------------------------------------------------------------------ i dasNov3.JH569290 I 2 C 0 e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56870634 265 + 57149010 I a score=1394398.000000 s hg38.chr20_KI270870v1_alt 118107 121 + 183433 GGGCAGTGGGAGTTCTTGGTGCTCTTCCAATGAGTGC----CCCCAGGAAGAGTTAGC-TGAGACCAGGGAGGGA--------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------ATGG-GAGATGACTCAGGTGCTGGAGCCA s panTro5.chr20 66444318 121 + 66533130 GGGCAGTGGGAGTTCTTGGTGCTCTTCCAATGAGTGC----CCCCAGGAAGAGTTAGC-TGAGACCAGGGAGGGA--------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------ATGG-GAGATGACTCAGGTGCTGGAGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119464 121 + 62195757 GGGCAGTGGGAGTTCTTGGTGCTCTTCCAATGAGTGC----CCCCAGGAAGAGTTAGC-TGAGACCAGGGAGGGA--------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------ATGG-GAGATGACTCAGGTGCTGGAGCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508641 120 - 578057 GGGCAGTGGGAGTTCTTGGTGCTCTTCC-ATGAGTGC----CCCCAGGAAGAGTTAGC-TGAGACCAGGGAGGGA--------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------ATGG-GAGATGACTCAGGTGCTGGAGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030439 121 - 110113093 GGGCGGTGGGAGTTCTTGGTGCTCTTCCAATGAGTGC----CCCCAGGAAGGGTTAGC-TGAGACCAGGGAGGGA--------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------ATGG-GAGATGACTCAGATGCTGGAGCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761309 120 - 92844088 GCGCAGTGGGAGTTCTTGGCACTCTTCCAATGAGTGC----CCCCAGGAAGGGTTAGC-TGAGACCAGGGAGGG---------------------------------------------------------------GCAGATACGGAGAGAGAACTGGG--------ATGG-GAGGTGACTCAGGTGCTGGAGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428678 120 + 96509753 GCGCAGTGGGAGTTCTTGGCACTCTTCCAATGAGTGC----CCCCAGGAAGGGTTAGC-TGAGACCAGGGAGGG---------------------------------------------------------------GCAGATACGGAGAGAGAACTGGG--------ATGG-GAGGTGACTCAGGTGCTGGAGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16900000 120 - 16982598 GCGCAGTGGGAGTTCTTGGCACTCTTCCAATGAGTGC----CCCCAGGAAGGGTTAGC-TGAGACCAGGGAGGG---------------------------------------------------------------GCAGATACGGAGAGAGAACTGGG--------ATGG-GAGGTGACTCAGGTGCTGGAGCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702276 120 - 3785965 GGGCAGTGGGAGTTCTTGGCACTCTTCCAATGAGTGC----CCCCAGGAAGGGTTAGC-TGAGACCAGGGAGGG---------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------ATGG-GAGGTGACTCAGGTGCTGGAGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281595 120 - 90373283 GGGCGGTGGGAGTTCGTGGCACTGTTCCGATGAGTGC----CCCCAGGAAGGGTTAGC-TGAGACCAGGGAGGG---------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------ATGG-GAGGTGACTCAGGTGCTGGAGCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 86107 120 - 179258 GGGCAGTGGGAGTTCTTGGCACTCTTCCAATGAGTGC----CCCCAGGAAGGGTTAGC-TGAGACCAGGGAGGG---------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------ATGG-GAGGTGACTCAGGTGCTGGAGCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5571913 120 - 5823884 GGGCAGTGGGAGTTCTTGGCGCTCTTCCAATGAGTGC----CCCCAGGAAGGGTTAGC-TGAGACCAGGGAGGG---------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------ATGG-GAGGTGACTCAGGTGCTGGAGCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 53100 124 + 372756 GGGCAGTGGGAGTTCTCAGTGCTCTTCCAA-GAGTCCCCTCCCCTTGGAAGGGTGAGC-TGAGACCAGGTCGGGA--------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------CTGG-GAAAGGACTCAGGTGCTGGAGCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289243 124 + 16356641 GGGCAGTGGGGGTTCTCAGTGGTCTTCCAA-GAGTCCCCTACCCCTGTAAGGGTTAGC-TGAGACCAGGTTGGGA--------------------------------------------------------------GCAGATAAGGAGAGAGAACTGGG--------CTGG-GAGAGGACTCAGGTGCTGGAGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158538 124 + 1231380 GGGCAGTGGGGGTTCTCAGTGCTCTTCCAA-GAGTCCCCTCCCCCTGGAAGGGTTAGC-TAAGACCAGGTCAGGA--------------------------------------------------------------ACAGATGAGGAGAGAGAACTGGG--------CTGG-GAGAGGACCGAGGTGCTGGAGCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2690905 124 + 11732439 GGGCAGTGGGGGTTCTCAGTGCTCTTCCAA-GAGTCCCCTCCCCCTGGAAGGGTTAGC-TGAGACCAGGTCGCGA--------------------------------------------------------------GCAGATAAGGAGAGAGAACCGGG--------CTGG-GAGAGGACTCCGGTGCTGGAGCCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56870899 119 + 57149010 GGGCAGTGGGAGTCCCTGGTGCTCTTCCAGCGACTG-----GTCTGGGAAGGGCTAGC-TGAGACCAGGTAGGGA--------------------------------------------------------------GCAGACAAGCGGGGAGAACTGGC---------CTG-GGGGTGACTCAGATGCTGGAGCCA i micMur3.chr18 I 265 I 902 s proCoq1.NW_012150197v1 1865085 118 - 2029793 GGGCAGT-GGAGTCCCTGGTGCTCCTCCAGTGACTG-----CTCCGGGGAGGGTTCGC-TGAGACCGGGTAGGCA--------------------------------------------------------------GCAGATGAG-AGGGAGAACTGGC--------ATTG-GGGCTGACTCAGACGCTGGAGTCA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22852527 120 + 22939663 AGGCAGTGGGAGTCCTTGGTGCTC-TCCAGTGACTC-----TCCCAGGAAAGGTTAGC-TGAGATCAGAGAGGGA--------------------------------------------------------------ACAGATAAACAAGGAGGACTGGC--------ATTATGGGGTGACTCAGATGCTAGAGCCA i otoGar3.GL873542 C 0 I 6 s mm10.chr2 181799719 170 + 182113224 -----------ACTCTGGGCCCTTTTTCA--GCCTGT----TTCCAGAAAGGGTTGGA-TGGTGCTAGGGAGGAAAAAGTAAAGAtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagaga--------gaga-gagagagCTTGGACACTGAAGTCA i mm10.chr2 C 0 C 0 s dasNov3.JH569290 249059 84 - 397369 ------------------------------------------------AAGCAGCAGCGGGAGAGCAGGGAAGGA--------------------------------------------------------------GCTGACAGAGAACCAAGGCTGTCCGCTGCCCCTGG-GTACCAAGTC-GATGCTGCAACA- i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47613354 20 + 47698779 I a score=147216.000000 s hg38.chr20_KI270870v1_alt 118228 11 + 183433 CGAACCAAAAA s panTro5.chr20 66444439 11 + 66533130 CGAACCAAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119585 11 + 62195757 CGAACCAAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508761 11 - 578057 GGAACCAAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030560 11 - 110113093 GGAACCAAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761429 11 - 92844088 GGAACCAAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428798 11 + 96509753 GGAACCAAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16900120 11 - 16982598 GGAACCAAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702396 11 - 3785965 GGAACCAAAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281715 11 - 90373283 GGAACCAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 86227 11 - 179258 GGAACCAAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5572033 11 - 5823884 GGAACCAAAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 53224 11 + 372756 GAAACCAAAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289367 11 + 16356641 GAAACCAAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158662 11 + 1231380 GAAACCAAAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2691029 11 + 11732439 GAACCCAAAAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1865203 11 - 2029793 GGAACTAAAAA i proCoq1.NW_012150197v1 C 0 I 110 s otoGar3.GL873542 22852653 11 + 22939663 GGAACCAGAGC i otoGar3.GL873542 I 6 C 0 s mm10.chr2 181799889 11 + 182113224 GGAACTAAGAA i mm10.chr2 C 0 C 0 s dasNov3.JH569290 249143 11 - 397369 GGAAATGAAGA i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56871018 902 + 57149010 I a score=259057.000000 s hg38.chr20_KI270870v1_alt 118239 26 + 183433 TGCAGGAGACACGGAATT---GCCAACCC s panTro5.chr20 66444450 26 + 66533130 TGCAGGAGACATGGACTT---GCCAACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119596 26 + 62195757 TGCAGGAGACACGGACTT---GCCAACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508772 26 - 578057 TGCAGGAGACACAGACTT---GCCAACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030571 29 - 110113093 TGCAGGAGACACAGACTTGGGGCCAACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761440 29 - 92844088 TGCAGGAGACACAGACTCAAGGCCAACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428809 29 + 96509753 TGCAGGAGACACAGACTCAAGGCCAACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16900131 29 - 16982598 TGCAGGAGACACAGACTCAAGGCCAACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702407 29 - 3785965 TGCAGGAGACACAGACTCAAGGTCAACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281726 29 - 90373283 TGCAGGAGACACAGACTCAAGGCCAACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 86238 29 - 179258 TGCAGGAGACACAGACTCAAGGTCAACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5572044 29 - 5823884 TGCAGGAGACACAGACTCAAGGCCAGCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 53235 29 + 372756 TGGAGGAGACACAGACTCGGGGCCAACCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289378 29 + 16356641 TGGAGGAGACACAGATTCGGGGCCAACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158673 28 + 1231380 TGGAGGAGACACCGACTC-GGGCCAACCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2691040 29 + 11732439 TGGAGGAGACGCAGACTTGGGGCCAACCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22852664 27 + 22939663 --CAGGAGACACAGATTTGGGGTAGACCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181799900 27 + 182113224 GGTAGGGAATATGTATGTGGGG--AGTCC i mm10.chr2 C 0 C 0 s dasNov3.JH569290 249154 18 - 397369 CGTGGGGGGCTCGGGCCC----------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1865214 110 - 2029793 I e canFam3.chr24 47613354 20 + 47698779 I e micMur3.chr18 56871018 902 + 57149010 I a score=795532.000000 s hg38.chr20_KI270870v1_alt 118265 77 + 183433 TGGGAAGATGCACTTGGGTCATGGGAGAGACAGACCTGAGTGAGACATAATTCAAGGGGC---ATGA--TAGGCAGGTCAGT s panTro5.chr20 66444476 77 + 66533130 TGGGAAGATGCACTTGGGTCATGGGAGAGACAGACCTGAGTGAGACATAATTCAAGGGGC---ATGA--TAGGCAGGTCAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119622 77 + 62195757 TGGGAAGATGCACTTGGGTCATGGGAGAGACAGACCTGAGTGAGACATAATTCAAGGGGC---ATGA--TAGGCAGGTCAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508798 77 - 578057 TGGGAAGATGCACTTGGGTCATGGGAGAGACAGACCTGAGTGAGACATAATTCAAGGGGC---ATGA--TAGGCAGGTCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030600 77 - 110113093 TGGGAAGATGCACTTCGGTCACGGGAGAGACAGATCTGAGTGAGACATAATTCAAGGGGC---GTGA--TAGGCGGGTCAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761469 77 - 92844088 TGGGAAGACGCACTTGGCTCATGGGAGAGACAGACCTGAGCAAGACATAATTCAAGGGGC---ATGA--TAGGCAGGTCAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428838 77 + 96509753 TGGGAAGACGCACTTGGCTCATGGGAGAGACAGACCTGAGCAAGACATAATTCAAGGGGC---ATGA--TAGGCAGGTCAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16900160 77 - 16982598 TGGGAAGACGCACTTGGCTCATGGCAGAGACAGACCTGAGCAAGACATAATTCAAGGGGC---ATGA--TAGGCAGGTCAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702436 77 - 3785965 TGGGAAGACGCACTTGGCTCATGGGAGAGACAGACCAGAGCAAGACATAATTCAAGGGGC---ATGA--TAGGCAGGTCAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281755 77 - 90373283 TGGGAAGACGCACTTGGCTCATGGGAGAGGCAGACCTGAGCAAGACATAATTCAAGGGGC---ATGA--TAGGCAGATCAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 86267 77 - 179258 TGGGAAGACGCACTTGGCTCATGGGAGAGACAGACCTGAGCAAGACATAATTCAAGGAGC---ATGA--TAGGCATGTCAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5572073 77 - 5823884 TGGGAAGACGCACTTGGCTCATGGGAGAGACAGACCTGAGCAAGACATAATTCAAGGGGC---ATGA--CAGGCAGGTCAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 53264 77 + 372756 TGGGCAGGTGCACTTGGGACATGGGAGAGACAGACTTGAGTGAGATGTAACTCAAGGGGC---ATGA--CAGCCGGGCCAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289407 77 + 16356641 TGGGAAGGTGCACTTGGGTCATGGGAGAGACAGACTTGAGTGAGATGGAACTCAAGGGGC---ATGA--CAGCCAGGCCAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158701 77 + 1231380 TGGGAAGGTGCACTTGGGTCTTGGGAGAGACAGACTTGAGTGAGATGGAACTCAAGGGGC---ATGA--CAGCCAGGCCAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2691069 77 + 11732439 CGGGAAGGTGCACTGGGGTCATCGGAGAGACAGACTCGAGTGAGATGTAACTCACGGGGC---GTGA--CAGCCAGGCCAGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22852691 80 + 22939663 TGGAAGGATGCACCTAGGGCATGAGAGAGATGGACTTGAGTGACATATAGTTCAGGGAGCTTAATAG--CAGGAGGGTCAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181799927 65 + 182113224 TGGG-AGGTACATGTGGGTCATGGGA-----AGACATAAG------AAAATTATAGGAGT---AAGAATTCAGCAGA--AGT i mm10.chr2 C 0 I 4 s canFam3.chr24 47613374 67 + 47698779 TGGAGAGACGCACCTGGGGCATGGGGAGCCCCGG--TGAGCTCTGGGGAAGCCCAG-------GTGG--TAGGTAGGT---- i canFam3.chr24 I 20 C 0 s dasNov3.JH569290 249172 55 - 397369 --CAGGGGGCCACTT------------AGCCAGGCTTAAGCTGGACAGAGCTCAGGGGGA---CCAC--TAGCT-------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1865214 110 - 2029793 I e micMur3.chr18 56871018 902 + 57149010 I a score=1145007.000000 s hg38.chr20_KI270870v1_alt 118342 107 + 183433 GGAGACACGA----GGGACATGTTTTCCGGGAACA-CCAGGCA-TATGAGACAAGCTCAGGGGAAAGAT-----------GCTAAGGGGACACAGGT--GGGGACATGGTTTCAGGGTGAGATGGA s panTro5.chr20 66444553 107 + 66533130 GGAGACACGA----GGGACATATTTTCCGGGAACA-CCAGGCA-TATGAGACAAGCTCAGGGGAAAGAT-----------GCTAAGGGGACACAGGT--GGGGACATGGTTTCAGGGTGAGATGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119699 107 + 62195757 GGAGACACGA----GGGACATATTTTCCGGGAACA-CCAGGCA-TATGAGACAAGCTCAGGGGAAAGAT-----------GCTAAGGGGACACAGGT--GGGGACATGGTTTCAGGGTGAGATGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508875 107 - 578057 GGACACATGA----GGGACATATTTTCTGGGAACA-CCAGGCA-TATGAGACAAGCTCAGGGGAAAGAT-----------ACTAAGGGGACACAGGT--GGGGACATGGTTTCAGGGTGAGATGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030677 108 - 110113093 GGAGACATGA----GGGACGTATTTTCTGGGAACACCCAGGCA-TATGAGACAAGCTCAGGGGAAAGAT-----------ACTAAGGGGACACAGGT--GGGGACATGGTTTCAGGGTGAGATAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761546 106 - 92844088 GGAGACATGA----GAGACATATTTTCTGGGAACACCCAGGCT-TATGAGACAAGCCCAGGGAAAAGAT-----------ACTAA-GGGACACAGGT---GGGACATGGTTTCAGGGTGAGATGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96428915 106 + 96509753 GGAGACATGA----GGGACATATTTTCTGGGAACACCCAGGCT-TATGAGACAAGCCCAGGGGAAAGAT-----------ACTAA-GGGACACAGGT---GGGACATGGTTTCAGGGTGAGATGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16900237 106 - 16982598 GGAGACATGA----GGGACATATTTTCTGGGAACACCCCGGCT-TATGAGACAAGCCCAGGGGAAAGAT-----------ACTAA-GGGACACAGGT---GGGACATGGTTTCAGGGTGAGATGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702513 106 - 3785965 GGAGACATGA----GGGACATATTTTCTGGGAACACCCAGGCT-TATGAGACAAGCCCAGGGGAAAGAT-----------ACTAA-GGAACACAGGT---GGGACATGGTTTCAGGGTGAGATGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281832 107 - 90373283 GGAGACATGA----GGGACATATTTTCTGGGAACACCCAGGCT-TATGAGACAAGCCCAGGGGAAAGAT-----------ACTAA-GGGACACAGGT--GGGGATATGGTTTCAGGGTGAGATGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 86344 106 - 179258 GGAGACATGA----GGGACATATTTTCTGGGAACACCCAGGCT-TATGAGCCAAGCCCAGGGGAAAGAT-----------ACTAA-GGGACACAGGT---GGGACATGGTTTCAGGGTGAGATGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5572150 107 - 5823884 GGAGACATGA----GGGACATATTTTCTGGGAACACCCAGGCA-TATGAGACAAGCCCAGGGGAAAGAT-----------ACTAA-GGGACACAGGT--GGGGACATGGTTTCAGGGTGAGATGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 53341 108 + 372756 GGAGATGTGA----GGGGTGTATTTTCTGGGAACCCCCATGCG-TAAGAGACAAGCTCAGGGGAAAGAC-----------ACTAAGGGGTCACAGGT--AGGGACGTGGTTTCAGGGTGAGATGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289484 100 + 16356641 GGAGATACGA----GGGGTGTATTTTCTGGGAACCCCCATGTG-TAAGAGACAAGCTCAGGGGAAAGAC-----------ACTAAGGGGTCACAGGT--A--------GTTTCAGGGTGAGATGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158778 108 + 1231380 GGAGATATGA----GGGGTGTATTCTCTGGGAACCCCCATGCG-TAAGAGACAAGCTCAGGGGAAAGAC-----------ACTAAGGTGTCACAGGT--AGGGACGTGCTTTCAGGGTGAGATGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2691146 67 + 11732439 GGAGACATGA-----GGGTGTATTTTCTGGGAACCCCCATGCA-TAAGAGAC-----------------------------------------------------GTGGTTTCAGGCTGAGACGGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1865324 108 - 2029793 GGAGACACGA----GGCACACATTTTCTGGAGACA-CCATGCG-CGTGAGACAAGCCTAGGGGACAGAC-----------ACTGAGGGGACACAGGC-GGGGGATATGGTTTCAGGGTGAGATGGA i proCoq1.NW_012150197v1 I 110 I 105 s otoGar3.GL873542 22852771 109 + 22939663 AGAGACACAA----GGGACACATTTTTTAGGAATG-CCGTGCA-TATGAGACAAGCCTGTGGGACAGAT-----------ACTGAGGGGACAAAGGTAGGGGGACATGATTTCAGATTGAATTGGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181799996 92 + 182113224 TGAGACATGA-----GGACACACTTTTTGAGAATACTCATGAC-TGTGAAGTAAGATCAGAGGACAGAT-------------TGA----------TT--GGGAACATGTTTTCTGGGTGAAGA--- i mm10.chr2 I 4 C 0 s canFam3.chr24 47613441 104 + 47698779 AGGGACGCAG----GGCACAGATTTTCTGTGAATACTCA-----CATGAGTCAGGCTTGGGGCAGATACCGAGGGACACAGCCGAGGGGACACAGAT--GAGGACATTGTTTCAA----------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 249227 100 - 397369 GGAGGCAGAGTGTCAGGACAGGTTTTCTAGGAACAGTCGTGCAGGATAAGAGAGGCTCAGATGATTGGT-----------ATTGA--------------GGGGTCAGGGCTTT-GGGTGAGACAGA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56871018 902 + 57149010 I a score=1015089.000000 s hg38.chr20_KI270870v1_alt 118449 113 + 183433 CCCAAAGAATGGCT-TTGCGGGGACACCCTTTAGGGCAACCCAGAT-----GGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAGGTCGGCAGTGTCATGCTCCGGCCTTGTGGGGCCATG s panTro5.chr20 66444660 113 + 66533130 CCCAAAGAATGGCT-TTGCGGGGACACCCTTTAGGGCAACCCAGAT-----GGTGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAGGTCGGCAGTGTCATGCTCCGGCCTTGTGGGGCCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119806 113 + 62195757 CCCAAAGAATGGCT-TTGCGGGGACACCCTTTAGGGCAACCCAGAT-----GGTGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAGGTCGGCAGTGTCATGCTCCGGCCTTGTGGGGCCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 508982 113 - 578057 CCCAAAGAATGGCT-TTGCGGGGACACCCTTTAGGGCAACCCAGAT-----GGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAGGTCAGCACTGTCATGCTCTGGCCTTGTGGGGCCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030785 113 - 110113093 CCCAAAGAATGGCT-TTGCGGGGACACCCTTTAGGGCAACCCAGAT-----GGCGG---------------------------------------------------------GACAGCTG---------------------------------------TTTGGGGACCCAGATTTAGGTCGGCACTGTCATGCTCGGGCCTTGTGGGGCCATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761652 108 - 92844088 CCCCA-----GGCT-TTGAGGGGACACCCTTTAGGGCAACCCAGAT-----GGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAAGTCAGCACCGTCATGCTCCAGCCTTGTGGGGCCATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429021 108 + 96509753 CCCCA-----GGCT-TTGAGGGGACACCCTTTAGGGCAACCCAGAT-----GGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAAGTCAGCACCGTCATGCTCCAGCCTTGTGGGGCCATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16900343 108 - 16982598 CCCCA-----GGCT-TTGAGGGGACACCCTTTAGGGCAACCCAGAT-----GGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAAGTCAGCACCGTCATGCTCCAGACTTGTGGGGCCATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702619 108 - 3785965 CCCCA-----GGCT-TTGAGGGGACACCCTTTAGGGCAACCCAGAT-----GGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAAGTCAGCACTGTCATGCTTCAGCCTTGTGGGGCCATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90281939 108 - 90373283 CCCCA-----GGCT-TTGAGGGGACACCCTTTAGGGCAACCCAGAT-----GGTGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAAGTCAGCACCGTCATGCTCCAGCCTTGTGGGGCCATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 86450 108 - 179258 CCCCA-----GGCT-TTGAGGGGACACCCTTTAGGGCAACCCAGAT-----GGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAAGTCAGCACCGTCATGCTCCAGCCTTGTGGGGCCATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5572257 108 - 5823884 CCCCA-----GGCT-TTGAGGGGACACCCTTTAGGGCAACCCAGAT-----GGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAAGTCAGCACCATCATGCTCTGGCCTTGTGGGGCCATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 53449 112 + 372756 CCCAA-GGATGGCC-TTGAGGGGAGACCCTTTAGGGCAACACAGAC-----TGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTAGGTCAGCACTGTCAGGCTGTGACCTTGTGTGGCCATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289584 112 + 16356641 CCCAA-GGATGGCC-TTGAGGGGAGACTCTTTAGGGCAACACAGAC-----TGCAG---------------------------------------------------------GACCGCTC---------------------------------------TTTGGGGACCCAGATTTAGGTCAGCACTGTCACACTGAGGCCTTGTGTGGCCATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158886 112 + 1231380 CCCAA-GGATGGCC-TTGAGGGGAGACCCTTTAGGGCAACACAGAC-----TGCGG---------------------------------------------------------GACAGCTC---------------------------------------TTTGGGGACCCAGATTTGGGTCAGCACTGTCATGCTGCGGCCTTGTGTGGCCATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2691213 112 + 11732439 CCCAA-GGACGTCC-TTGAGGGGAGACCCTTCGGGGCAACACAGAC-----TGCGG---------------------------------------------------------GACGGCTC---------------------------------------TTTGGGGACCCAGATTTAGGTCAGCACTGTCATGCTGTGGCCTTGTGTGGCCATG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22852880 208 + 22939663 CCTGG-CGAGTGAT-TCAGGGGGACATCTTTTAGGGTAACATAGAT-----TGGGGGAAAGATACTGAGGGGACACAGCCAGAGATATTATTCAGAGTGAGGTGGACCTGAAAGACAGCTTAGATGGCACCCTTTAGAGTGACAGAGTGAGTGACAGTGGTTCAGGGGCTCAGATTTAGGCCAGCACTGCCAGGCTCAGGCTCTGAGGGTCCATA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181800088 68 + 182113224 CTTGGAGGGTGGCTCTTGAGATGATACCCTTAAGGTTAAGTCAGAC-------TAG---------------------------------------------------------GGTAACCA---------------------------------------TTTGACGG-----------------------------------TGT--------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47613545 87 + 47698779 ---------------CCCGGAGGATAGCGACTAAGGGCACACACGT-----GG-GG---------------------------------------------------------GACAGCGG---------------------------------------CCTGAGAGCTCAGATTCAGACCAGCA-----------AGGTCTTGAGGGGACGTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 249327 86 - 397369 CTTGGGGTGTAGCT-GTTGGGCCGCACGGACTCAGGAGACACAGAGATGGAGGAGG---------------------------------------------------------TTCTGCTG---------------------------------------GATGGTGACGCAGACCTGGGGTG-------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1865432 105 - 2029793 I e micMur3.chr18 56871018 902 + 57149010 I a score=420796.000000 s hg38.chr20_KI270870v1_alt 118562 31 + 183433 GGCACAAAGAGACACAGGCTGAAGGTGAGAC s panTro5.chr20 66444773 31 + 66533130 GGCACAAAGAGACACAGGCTGAAGGTGAGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119919 31 + 62195757 GGCACAAAGAGACACAGGCTGAAGGTGAGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509095 31 - 578057 GGCACAAAGAGACACAGGCTGAAGGTGAGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030898 31 - 110113093 GGCACAAAGAGACACAGGCTGAAGGTGAGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761760 31 - 92844088 GGCACAAAGAGACACAGGCTAAAGGTGAGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429129 31 + 96509753 GGCACAAAGAGACACAGGCTAAAGGTGAGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16900451 31 - 16982598 GGCACAAAGAGACACAGGCTAAAGGTGAGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702727 31 - 3785965 GGCACAAAGAGACACAGGCTAAAGGTGAGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282047 31 - 90373283 GGCACAAAGAGACACAGGCTAAAGGTGAGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 86558 31 - 179258 GGCACAAAGAGACACAGGCTAAAGGTGAGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5572365 31 - 5823884 GGCACAAAGAGACACAGGCTAAAGGTGAGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 53561 31 + 372756 GGCACAAGGAGACACAGGCTGCAAGTGAGAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289696 31 + 16356641 GGCACAAGGAGACACAGGCTGCAGGTGAGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1158998 31 + 1231380 GGCACAAGGAGACACAGGCTGCAGGTAAGAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2691325 31 + 11732439 GGCACGAGGAGACACAGGCTGCAGGTGAGAC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1865537 31 - 2029793 GGCACAAGCAGACACAGGCTGAAGGTGAGAC i proCoq1.NW_012150197v1 I 105 I 534 s otoGar3.GL873542 22853088 31 + 22939663 GGCATAAGAAGACACAGGTCGAGGGTGAGAA i otoGar3.GL873542 C 0 I 4 s mm10.chr2 181800156 18 + 182113224 -GTACA------------TTGAAGGCGAGAC i mm10.chr2 C 0 I 3 s canFam3.chr24 47613632 29 + 47698779 GACGCAAGCAGAC-CAGGC-AAAGGTGACAC i canFam3.chr24 C 0 I 4 s dasNov3.JH569290 249413 11 - 397369 GGCAC--------------------TGAGGC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56871018 902 + 57149010 I a score=2244137.000000 s hg38.chr20_KI270870v1_alt 118593 232 + 183433 TTAGGGACAGGTGTCAAGGGCCCGGGGTGGTTACTAGCCTGGCTGTGGTGTGCTTGGGCCGCACAGATCAGCGCAGAATTTGGTGGGACACATATGAGGAACACAGACACCAAGTGACAGCCCTAGGCCCAGGTTTTTGAGGGTCTCAGACCTGTGG-GACAGACATAGGAGGACCCAGATGCAAGGCATCCTGCCTTCAGGGATAGATTTTCAGTGCATGGACCCAAAGGGA s panTro5.chr20 66444804 232 + 66533130 TTAGGGACAGGTGTTAAGGGCCTGGGGTGGTTACTAGCCTGGGTGTGGTGTGCTTGGGCCGCACAGATCAGCGCAGAATTTGGTGGGACACATATGAGGAACACAGACACCAAGTGACAGCCCTAGGACCAGGTTTTTGAGGGTCTCAGACCTGTGG-GACAGACATAGGAGGACCCAGATGCAAGGCATCCTGCCTTCAGGGATAGATTTTCAGTGCATGGACCCAAAGGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62119950 232 + 62195757 TTAGGGACAGATGTTAAGGGCCTGGGGTGGTTACTAGCCTGGGTGTGGTGTGCTTGGGCCGCACAGATCAGCGCAGAATTTGGTGGGACACATATGAGGAACACAGACACCAAGTGACAGCCCTAGGACCAGGTTTTTGAGGGTCTCAGACCTGTGG-GACAGACATAGGAGGACCCAGATGCAAGGCATCCTGCCTTCAGGGATAGATTTTCAGTGCATGGACCCAAAGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509126 232 - 578057 TTAGGGACAGGTGTTAAGGGCCTGGGGTGGTTACTGGCCTGGGTGTGGTGTGCTTGGGCCGTACAGATCAGCGCAGAATTTGGTGGGACACATATGAGGAACACAGATGCCAAGTGACAGCCCTAGGCCCAGGTTTTTGAGGGTCTCAGACCTGTGG-GACAGACATAGGAGGACCCAGATGCAAGGCGTCCTGCCTTCAGGAATAGATTTTCAGTGCATGGACCCAAAGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110030929 232 - 110113093 TTAGGGACAGGTGTTAAGGGCCTGGGGTGGTTACTAGCCCGGGTGTGGTGTGCTTGGGCTGCACACATCAGCGCAGAATTTGGTGGGACACGTATGAGGAACACAGACACCCAGTGACAGCCCTAGGCCCAGGTTTTCGAGGGTCTCAGACCTGTGG-GACAGACATAGGAGGACCCAGATGCAAGGCGCCCTGCCTTCAGGAATAGATTTTCAGTGCATGGACCCAAAGGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92761791 232 - 92844088 TTAGGGACAGGTGTTAAGGGCCTGGTGTGGTTACTAGCCTGGGTGTGGTGTGCTTGGGCCACACAGATCAGCGCAGAATTGGGTGGGACATGTATGAGGAACAGAGACACCAAGTGACAGCCCCAGGCCCAGGTTTTCAAGGGTCTCAGACCTGTGG-GACAGACACAGGGGGACCCAGAGGCAAGGTGTCCTGCCTTCAGGAATAGATTTTCAGTGCATGGACCCAAAGGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429160 232 + 96509753 TTAGGGACAGGTGTTAAGGGCCTGGTGTGGTTACTAGCCTGGGTGTGGTGTGCTTGGGCCACACAGATCAGCGCAGGATTGGGTGGGACACGTATGAGGAACAGAGACACCAAGTGACAGCCCCAGGCCCAGGTTTTCAAGGGTCTCAGACCTGTGG-GACAGACACAGGGGGACCCAGAGGCAAGGTGTCCTGCCTTCAGGAATAGATTTTCAGTGCATGGACCCAAAGGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16900482 232 - 16982598 TTAGGGACAGGTGTTAAGGGCCTGGTGTGGTTACTAGCCTGGGTGTGGTGTGCTTGGGCCACACAGATCAGCGCAGAATTGGGTGGGACACGTATGAGGAACAGAGACACCAAGTGACAGCCCCAGGCCCAGGTTTTCAAGGGTCTCAGACCTGTGG-GACAGACACAGGGGGACCCAGAGGCAAGGTGTCCTGCCTTCAGGAATAGATTTTCAGTGCATGGACCCAAAGGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702758 213 - 3785965 TTAGGGACAGGTGTTAAGGGCCT------------------GGTGTGGTGTGCTTGGGCCACACAGATCAGCGCAGAATTGGGTGGGAAACGTATGAGGAACAGAGACACCAAGTGACAGCCCCAGGCCCAGGTTTTCAAGGGTCTCAGACCTGT-G-GACAGACACAGGGGGACCCAGAGGCAAGGTGTCCTGCCTTCAGGAATCGATTTTCAGTGCATGGACCCAAAGGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282078 232 - 90373283 TTAGGGACAGGTGTTAAGGGCCTGGTGTGGTTACTAGCCTGGGTGTGGTGTGCTTGGGCCACACAGATCAGCGCAGAATTGGTTGGGACACGTATGAGGAACAGAGACACCAGGTGACAGCCCCAGGCCCAGGTTTTCAAGGGTCTCAGACCTGTGG-GACAGACACAGGGGGACCCAGAGGCAAGGTGTCCTGCCTTCAGGAATAGATTTTCAGTGCGTGGACCCAAAGGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 86589 214 - 179258 TTAGGGACAGGTGTTAAGGGCCT------------------GGTGTGGCGTGCTTGGGCCACACAGATCAGCGCAGAATTGGGTGGGACACGTGTGAGGAACAGAGACACCAAGTGACAGCCCCAGGCCCAGGTTTTCAAGGGTCTCAGACCTGTGG-GACAGACACAGGGGGACCCAGAGGCAAGGTGTCCTGCCTTCAGGAATCGATTTTCAGTGCATGGACCCAAAGGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5572396 232 - 5823884 TTAGGGACGGGTGTTAAGGGCCTGGTGTGGTTACTAGTCTGGGTGTGGTGTGCTTGGGCCACACAGATCAGCGCAGAATTGGGTGGGACACGTATGAGGAACAGAGACACCAAGTGACAGCCCCAGGCCCAGGTTTTCAAGGGTCTCAGACCTGTGG-GACAGACACAGGGGGACCCAGAGGCAAGGTGTCCTGCCTTCAGGAATAGATTTTCAGTGCATGGACCCAAAGGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 53592 213 + 372756 TTAGGGACAGGTGGCATGGGCCCGGTGTGGTTACTA---------------GCTTGGGCCCCACAGCTCAGGGCAGAATTTTGTGGGATACATGTAAGGAACACAGACATCAGGTGACAGCCCTAGGCCCAGATGTTTGAGGGTCTCAGACCTGTGG-GACAGACATAGGGGGACCCAG----CAAGTTTTCTGCCTTCGGGAATAGATTTTCAGTGCTTGGACCCAAAGGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289727 212 + 16356641 TTAGGGACAGGTGGCACAGGCCTGGTGTGGTTACTA---------------GCTTGGGCCGCACAGCTCAGGGCAGAATTCTGTGGGATACGTATAAGGAACACAAACACCA-GTGACAGCTCTAGGCCCAGGTGTTCGAGGGTCTCAGACCTGTGG-GACAGATATAGGGGGACCCAG----CAGGTTTCCTGTTTTCAGGAATAGATTTTCAGTGCTTGGGTCCAAAGGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1159029 213 + 1231380 TTAGGGACAGGTGGCACAGGCCCGGTGTGGTTACTA---------------GCTTGGGCCACACAGCTCAGGGCAAAGTTTTGTGGGATACATGTAAGGCACACAAACACCAGGTGACAGCCCTAGACCCAGGCGTTTGAGGGTCTCAGACCTGTGG-GACAGACATAGGGCGACCCAG----CAGGCTTCCTGCCTTCAGGAATAGATTTTCAGTGCTTGGACCCAAAGGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2691356 202 + 11732439 TTAGGGGCAGGTGGCACGGGCCCGGCGTGGTTACTG---------------GCTTGGGTCGCACAGCTCAGGGCAGAATTCTGTGGGATACGTG-----------AACAGCAGGTGACAGCCCTAGGCCCAGGTGTTTGAGGGTCTCAGACCTGTGG-GGCAGACACAGGGGGGCCCGG----CAAGTTTCCTGCCTTCAGGAATAGATTTTCAGTGCTTGGACCCAAAGGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22853123 201 + 22939663 TCAGGGACAGGC-------------------TTCTAGTCTGGGGATGGCATGTGTGGGTCCCACAAACCAGGGCTGACTTTCATGAAACACATACAAGGAACATAGTCACCAAGTGACAG--CTAGGCCCAGGTATTTAAAGG-------ACTGTAG-GACAGGCATAGG-TTACCCAG--ACAAGGTATCCTGCCTTCAGGAATAGATTTTGAGGGCACAGGCCCATGGAGC i otoGar3.GL873542 I 4 C 0 s mm10.chr2 181800177 155 + 182113224 TTTAGAATAGGTA-CAGGAGCTTGAGTTTGTCA----------------GACTTTGGGTT-----------TGAAGATTTTGATGGGACAC------------TGAATGCT---TGATATCAACAAGCCTAGGTATTTGAAGAACTTTCACCTTT-G-GATAAATGTTAGGGG--CCAGGTGCAA-----------TTCAGGTTTAGA-----AGTAC--------------- i mm10.chr2 I 3 C 0 s canFam3.chr24 47613665 184 + 47698779 CTATGGACAGGTGTTGGGGCCTCTGTGGGGT----------------GTCACTCTGGGGCTCCCAGATCAGGGCAGACGGTGGTGGGAGGC-TGTTGAGCGCACGG------------------------------CTGGAGGACTCAGACCCGTGGAAATGGACATTGGGGGGCCCAGATGCAGGGTATCCTGCCTCCAGGGACAGA-GTCGAGGGCATGGACCCA-GGGGA i canFam3.chr24 I 4 C 0 s dasNov3.JH569290 249424 195 - 397369 --------------------CCCGGGCGGAGTGCCAGTCATGGGGCAGCTGGCC---------CAGATCGGGGTAGACGCTGGTGGACCCTGT-TGGGGAGTACAGACA------GAGACCCCCAGGAATCGACACATGAGGGACTCAGGGCAGTGG-GAAAGAC-TTGGAGAATGCAGGCGCAGGGTGTCCTGCCTTCAGGGGTAGACTCTGAGGGCAGGGGTCCAGGGTGA i dasNov3.JH569290 C 0 M 644 e proCoq1.NW_012150197v1 1865568 534 - 2029793 I e micMur3.chr18 56871018 902 + 57149010 I a score=601964.000000 s hg38.chr20_KI270870v1_alt 118825 80 + 183433 CACGGCCCC-GGGTGACACAGGTGGCCAAGCTGAGAACACCAGGCAGTGCCCAGCTGGGCTGTGAGTGTCTGTG-----CAACGTG s panTro5.chr20 66445036 80 + 66533130 CACGGCCCC-GGGTGACACAGGTGGCCAAGCTGAGAATACCAGGCAGTGCCCAGCTGGGCTGTGAGTGTCTGTG-----CAACGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120182 80 + 62195757 CACGGCCCC-GGGTGACACAGGTGGCCAAGCTGAGAACACCAGGCAGTGCCCAGCTGGGCTGTGAGTGTCTGTG-----CAACGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509358 80 - 578057 CACGGCCCC-GGGTGACACAGGTGGCCAAGCTGAGAACACCAGGCAGTGCCCAGCTGGGCTGTGAGTGTCTGTG-----CAACATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110031161 78 - 110113093 CACGGCCCC-GGGTGACACAGGTGGCCAAGCTTAGAACACCAGGCAGTGCCGAGCTGGGCTGTGAGTGTC--TG-----CAATGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762023 80 - 92844088 CACAGCCCC-GGGTGACACAGGTGGCCAAGCTGAGAACACCAGGCAGTGCCGGGCTGGGCTGTGAGTGTCTGTG-----CAATGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429392 80 + 96509753 CACAGCCCC-GGGTGACACAGGTGGCCAAGCTGAGAACACCAGGCAGTGCCGGGCTGGGCTGTGAGTGTCTGTG-----CAATGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16900714 80 - 16982598 CACAGCCCC-GGGTGACACAGGTGGCCAAGCTGAGAACACCAGGCAGTGCCGGGCTGGGCTGTGAGTGTCTGTG-----CAATGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3702971 80 - 3785965 CACAGCCCT-GGGTGACACAGGTGGCCAAGCTGAGAACACCAGGCAGTGCCGGGCTGGGCTGTGAGTGTCTGTG-----CAATGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282310 80 - 90373283 CACAGTCCC-GGGTGACACAGGTGGCCAAGCTGAGAACACCAGGCAGTGCCGGGCTGGGCTGTGAGTGTGTGTG-----CAGTGTG i chlSab2.chr2 C 0 I 19 s manLeu1.NW_012101652v1 86803 80 - 179258 CACAGCCCC-GGGTGACACAGGTGGCCAAGCTGAGAACACCAGGCAGTGCCGGGCTGGGCTGTGAGTGTCTGTG-----CAACGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5572628 80 - 5823884 CACAGCCCC-GGGCGACACAGGCGGCCAAGCTGAGAACACCAGACAGTGCCGGGCTGGGCTGTGAGTGTCTGTG-----CAATGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 53805 75 + 372756 CACAGGCTC--GGTGACACAAGTGGCCAGGCTGAGAACACCAGGCAGAGCTGAGTTGGGCT----GTGTTTGTG-----CAACGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16289939 53 + 16356641 ------------------------GCCAGGCTGAGAACACTGGGCAGAGCTGAGTTGGGCT----GTGTTTGCG-----CAACGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1159242 61 + 1231380 CACAGGCG----------------GCCAGGCTGAGAACACCGGGCAGAGCTGCGTTGGGCT----GTGTTTGCG-----CAATGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2691558 61 + 11732439 CACAGGTG----------------GCCAGGCTGAGAACACCAGGCAGAGCTGAGTTGGGCT----GTGTTTGCG-----CAACGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22853324 86 + 22939663 CAGAGGCTCAGGGTGACACCGGTGGCTGGGCTGGGAATGCTAGGCAGTGCCAACTCAGGCTGTGGAGACATATGCATGTCAACAGG i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181800332 31 + 182113224 ---------------------------------AGGATACTAGACAGTATCT--TTAGGCTATAAG-------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47613849 33 + 47698779 CAGAGCCTCGGGGTGAGGCAGTGGGAGAGGCTG----------------------------------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1865568 534 - 2029793 I e micMur3.chr18 56871018 902 + 57149010 I e dasNov3.JH569290 249619 644 - 397369 M a score=52652.000000 s hg38.chr20_KI270870v1_alt 118905 6 + 183433 AACGTG s panTro5.chr20 66445116 6 + 66533130 AACGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120262 6 + 62195757 AACGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509438 6 - 578057 AACGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110031239 6 - 110113093 AACGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762103 6 - 92844088 AACGTG i rheMac8.chr10 C 0 I 20 s macFas5.chr10 96429472 6 + 96509753 AACATG i macFas5.chr10 C 0 I 20 s macNem1.NW_012014244v1 16900794 6 - 16982598 AACGTG i macNem1.NW_012014244v1 C 0 I 20 s cerAty1.NW_012001373v1 3703051 6 - 3785965 AACGTG i cerAty1.NW_012001373v1 C 0 I 20 s manLeu1.NW_012101652v1 86883 6 - 179258 AACGTG i manLeu1.NW_012101652v1 C 0 I 20 s colAng1.NW_012114444v1 5572708 6 - 5823884 AACGTG i colAng1.NW_012114444v1 C 0 I 20 s calJac3.chrUn_GL286459 53880 5 + 372756 AATGT- i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16289992 6 + 16356641 AACGTG i saiBol1.JH378156 C 0 I 14 s cebCap1.NW_016107870v1 1159303 6 + 1231380 AACGTG i cebCap1.NW_016107870v1 C 0 I 14 s aotNan1.NW_018500483v1 2691619 6 + 11732439 AATGTG i aotNan1.NW_018500483v1 C 0 I 15 s otoGar3.GL873542 22853411 6 + 22939663 AATGCA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181800363 6 + 182113224 AACACA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1865568 534 - 2029793 I e canFam3.chr24 47613882 0 + 47698779 C e chlSab2.chr2 90282390 19 - 90373283 I e micMur3.chr18 56871018 902 + 57149010 I e dasNov3.JH569290 249619 644 - 397369 M a score=2149825.000000 s hg38.chr20_KI270870v1_alt 118911 242 + 183433 CGGTTCTGGTTCTGAGGGACTGATGTTGGGGCACAGATGCTGCGAGAATTCTGGACAGAGGCCGTGGGACAGGGGTGGCAA--GCCCAGG----AGGCCGGTGTTGGGCACGGGTTTGGAAGCCCCTCAGGACACCCCTGCCTGTCCACATGGGTGGAAGTCTGA-------CTCCTTTGAACTTGGGGCAGCAGAGCAAGAGCTCCTTCCCTTTG--GAGCCCCCTCCTGGGACCCT--CCTGCTCTGAGGTGGGAGT s panTro5.chr20 66445122 242 + 66533130 CGGTTCTGGTTCTGAGGGACTGACGTTGGGGCACAGATGCCGCGAGAATTCTGGACAGAGGCCGTGGGACAGGGGTGGCAA--GCCCAGG----AGGCCGGTGTTGGGCACAGGTTTGGAAGCCCCTCAGGACACCCCTGCCTGTCCACATGGGTGGAAGTCTGA-------CTCCTTTGAACTTGGGGCAGCAGAGCAAGAGCTCCTTCCCTTTG--GAGCCCCCTGCTGGGACCCT--CCCGCTCTGAGGTGGGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120268 242 + 62195757 CGGTTCTGGTTCTGAGGGACTGACGTTGGGGCACAGATGCCGCGAGAATTCTGGACAGAGGCCGTGGGACAGGGGTGGCAA--GCCCAGG----AGGCCGGTGTTGGGCACAGGTTTGGAAGCCCCTCAGGACACCCCTGCCTGTCCACATGGGTGGAAGTCTGA-------CTCCTTTGAACTTGGGGCAGCAGAGCAAGAGCTCCTTCCCTTTG--GAGCCCCCTGCTGGGACCCT--CCCGCTCTGAGGTGGGAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509444 242 - 578057 CGGTTCTGGTTCTGAGGGACTGATGTTGGGGCACAGATGCCGCGAGATTTCTGGACAGAGGCCGTGGGACAGGGGCGGCAA--GCCCAGG----AGGCCGGTGTTGGGCACGGGTTTGGAAGCCCCTCAGGACACCCCTGCCTGTCCACATGGGTGGAAGTCTGA-------CTCCTTTGAACTTGGGGCAGCAGAGCAAGAGCTCCTTCCCTTTG--GAGCCCCCTGCTGGGACCCT--CCCGCTCTGAGGTGGGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110031245 224 - 110113093 CGGTTCTGGTTCTAAGGGACTGATGTTGGGGCACAGATGCCGCGAGAATTCTGGACAGAGGCCGTGGGACAGGGGCGGCAA--GCCTAGG----AGGCCGGTGTTGGGCAGGGGTTTGGAAGCCCCTCAGGACACCCCTGCCTGTCCACATGGGTGGAAGTCTGA-------CTCCTTT------------------CAAGAGCTCCTTCCCTTTG--GAGCCCCCTGCTGGGACCCT--CCCCCTCTGAGGCGGGAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762129 247 - 92844088 TGGGACTGCTTCTAAGGGACTTGTGTGGGGACCCAGATGCGGCGAGAATTCTGAATGGAGGCTGTGGGAC-GGGGCGGCAA--GCCCAGG----AGGCAGGTGTTGGGCACCGGTTTGGAAGCCCCTCAGGACCCCGCTGCCTGTCCACATGGGTGAAAGTCTGACTTCCTGCTCCTTTGAGCTGGGGGCAGCAGAGCAAAAGCTCCTTCCCTTTG--GAGCCCACCGTCGGGG-CCT--CCCCCTCTGGAGTGGGAGT i rheMac8.chr10 I 20 C 0 s macFas5.chr10 96429498 247 + 96509753 TAGGACTGCTTCTAAGGGACTCGTGTGGGGACCCAGATGCGGCGAGAATTCTGAATGGAGGCTGTGGGAC-GGGGCGGCAA--GCCCAGG----AGGCAGGTGTTGGGCACGGGTTTGGAAGCCCCTCAGGACCCCGCTGCCTGTCCACATGGGTGGAAGTCTGACTTCCTGCTCCTTTGAGCTGGGGGCAGCAGAGCAAAAGCTCCTTCCCTTTG--GAGCCCACCGTCGGGG-CCT--CCCCCTCTGGAGTGGGAGT i macFas5.chr10 I 20 C 0 s macNem1.NW_012014244v1 16900820 247 - 16982598 TGGGACTGCTTCTAAGGGACTCGTGTGGGGACCCAGATGCGGCGAGAATTCTGAATGGAGGCTGTGGGAT-GGGGCGGCAA--GCCCAGG----AGGCAGGTGTTGGGCACGGGTTTGGAAGCCCCTCAGGACCCCGCTGCCTGACCACATGGGTGGAAGTCTGACTTCCTGCTCCTTTGAGCTGGGGGCAGCAGAGCAAAAGCTCCTTCCCTTTG--GAGCCCACCGTCGGGG-CCT--CCCCCTCTGGAGTGGGAGT i macNem1.NW_012014244v1 I 20 C 0 s cerAty1.NW_012001373v1 3703077 247 - 3785965 TGGGACTGCTTCTAAGGGACTCGTGTGGGGACCCAGATGCGGCGAGAATTCTGAACGGAGGCTGTGGGAC-GGGGCGGCAA--GCCCAGG----AGGCAGGTGTTGGGCACGGGTTTGGAAGCCCCTCAGGACCCCGCTGCCTGTCCACATGGGTGGAAGTCTGACTTCCTGCTCCTTTGAGCTGGGGGCAGCAGAGCAAAAGCTCCTTCCCTTTG--GAGCCCACCGTCGGGG-CCT--CCCCCTCTGGAGTGGGAGT i cerAty1.NW_012001373v1 I 20 C 0 s chlSab2.chr2 90282409 225 - 90373283 TGGGACTGGTTCCAAGGGACTCGTGTGGGGACCCAGATGCTGCGAGAATTCTGAATGGAGGCTGTGGGAC-GGGGCGGCAA--GCCCAGG----GGGCAGGTGTTGGGCACGGGTTTGGAAGCCCCTCAGGACCCCGCTGCCTGTCCACGTGGGTGGAAGTCTGACTTCCTGCTCCTTTGAGCTGGGGGCAGCA------------------------GAGCCCACCGTGGGGG-CCT--CCCCCTCTGGAGTGGGAGT i chlSab2.chr2 I 19 C 0 s manLeu1.NW_012101652v1 86909 247 - 179258 TGGGACTGCTTCTAAGGGACTCGTGTGGGGACCCAGATGCAGCGAGAATTCTGAATGGAGGCTGTGGGAC-GGGGCGGCAA--GCCCAGG----AGGCAGGTGTTGGGCACGGGTTTGGAAGCCCCTCAGGACCCCGCTGCCTGTCCACATGGGTGGAATTCTGACTTCCTGCTCCTTTGAGCTGGGGGCAGCAGGGCAAAAGCTCCTTCCTTTTG--GAGCCCACCGTCGGGG-CCT--CCCCCTCTGGAGTGGGAGT i manLeu1.NW_012101652v1 I 20 C 0 s colAng1.NW_012114444v1 5572734 247 - 5823884 TGGGACTGGTTCTAAGGGACTCATGTTGGGACCCAGATGCAGCGAGAATTCTGAATGGAGGCTGTGGGAC-GGGGCGGCAA--GCCCAGG----AGGCAGGTGTTGGGCACGGGTTTGGAAGCCCCTCAGGACTCTGCTGCCTGTCCACATGGGTGGAAGTCTGACTTCCTCCTCCTTTGAACTGGGGGCAGCAGAGCAAAAGCTCCTTCCCTTTG--GAGCCCACCGTCGGGG-CCC--TCCCCTCTGGTGTGGGAGT i colAng1.NW_012114444v1 I 20 C 0 s calJac3.chrUn_GL286459 53886 239 + 372756 TGGGACTGCCTCTGA-GGACTGAG-----GACATAGCTGCAGTGAGAATTCTGGACAGAGGCTG-GGGAC-AAGGTGGCAA--ACCCAGG----AGACAGATGTTGGGCACGGATTT-GAAGCCCTTCAGGACACCCCTGCCTGTCCACATGGGTGGAAGTCTGACTTTCTGCTCCCTTGAACTTGAGGCAGCAGAGCAAGGGCTCCTTCCCTTTG--GAGTCCACTGCTGGGG-CCT--TCCCCTCTAGGGTGGGGGC i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16290012 239 + 16356641 TGGGAATGGCTCTGA-GGACCGAT-----CACGCAGCTGCAGCGAGAATTCGGGACAGAGGCTG-GGGAC-AGGGTGGCAA--GCCCAGG----AGACAGGGCTTGGGCACGGATTT-GAAGCCCCTCAGGACACCCCTGCCTGTCCACATGGGTGGAAGTCTGGCTTCCTGCTCCCTCGAACTTAGGGCAGCAGAGCAAGGGTTCCTTCCCTTTG--GAGCCCACTGCTGCGG-CCC--TGCCCTCTGGGGTGGGGGC i saiBol1.JH378156 I 14 C 0 s cebCap1.NW_016107870v1 1159323 243 + 1231380 TGGGACTGGCTCTGA-GGACTGAT-----GACACAGCTGCAGCAAGAATTCTGGACAGAGGCTG-GGGAC-AGGGTGGCAA--GCCCAGGAGACAGACAGGTGTTGGGCACGGATTC-GAAACCCCTCAGGACACCCCTGCCTGTCCACATGGGTAGAAATCTGGTTTCCTGCTCCCTTGAACTTGGGGCAGCAGAGCAAGGGCTCCTTCCCTTTG--GAGCCCACTGCTGGGG-CCC--TCCTCTCTGGGGTGGGGGC i cebCap1.NW_016107870v1 I 14 C 0 s aotNan1.NW_018500483v1 2691640 235 + 11732439 TGGGACTGGCTCTGA-GGACCGAT-----GACACAGCTGCAGCGAGAACTCTGGACAGAGGCTG-GGGAC-AGGGTGGCAA--GCCCAGG----AGACAGGCGTTGGGCACGGATTG-GAATCCCCTCAGGACACCCCTGCCTGTCCACATGGGTGGAAGTCTGACTTCCTGCTCCCTTGAACTTGGGGCAGCAGAGCAAGGGCTCCTTCCCTTTG--GAGCCCACTGCCGGGG-CC---TCCCCTCTGGGGTGGG--- i aotNan1.NW_018500483v1 I 15 C 0 s otoGar3.GL873542 22853417 231 + 22939663 GAGGCCTGGTTTCAAGGGACTGACACTGGGGTACAGATGCAGTGAGAATTCTGTACAGAGGTGG-GGGGCAGTGGCAGCAA--GATCAGG----AGGCAGATGTTGGGCACAGACTTGGGAGCTCCTCAGAATGGCCCTGCCTATCCAGATGGGTTGAGGTTTGA----------------GTTCAGAGTGGCAGAGCTGGGGCTCTTTCC-TGTG--GAGACC-CTGCTGGGG-CATTGTCCTCTCTGAGTTGGGGGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181800369 170 + 182113224 -------CATTTTGA------CATGTGGAGGGACAGA--CAGCAAGACTTT--------------------GGGG--------GCTCAGG-------CAGGTATTTGGTACAGATAT--GAGTCCCTTAGCATATCACCACTTGCTTGGATTGGTAGAAATCTGACTCCCTATACATTTGAACTTGGAGAGACTGAGC-AGGCCTTCTTCCCTCTGCTGAATT------------------------------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47613882 183 + 47698779 -----------------GGCTGACACTGGGGCGCTGAGCCGGTGTGAGCCCCGGGGAGAGCCCGTGTGCGGCGGGCGGCGGGCGCTCAGG----AAGGGGGGGCT-----------------------------------------CACGATGGCCAAAGTCCAGCTTCCTACCCCTTTGAACTTGGAGAGGCGGAGCCA--GCGTCCTGCCCTTG--GAGTCC----CTAGGG-GCT--TAC---CTGGGGTGGGAGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1865568 534 - 2029793 I e micMur3.chr18 56871018 902 + 57149010 I e dasNov3.JH569290 249619 644 - 397369 M a score=541224.000000 s hg38.chr20_KI270870v1_alt 119153 45 + 183433 TCTGAGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGGACAG s panTro5.chr20 66445364 45 + 66533130 TCTGAGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGGACAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120510 45 + 62195757 TCTGAGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGGACAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509686 45 - 578057 TCTGAGTTTGGCTTTGTGACCTCTGCAC-CCTCCCAAAGGGGACAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110031469 45 - 110113093 TCTGAGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGGACAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762376 44 - 92844088 TCTGCGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGG-CAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429745 44 + 96509753 TCTGCGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGG-CAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901067 44 - 16982598 TCTGCGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGA-CAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703324 44 - 3785965 TCTGCGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGG-CAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282634 45 - 90373283 TCTGAGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGGACAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87156 44 - 179258 TCCGAGTTTGGCTCTGTGACCTCTGCAC-CCTCCCAAAGGGG-CAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5572981 45 - 5823884 TCTGAGTTTGGCTCTGGGACCTCTGCGC-CCTCCCAAAGGGGACAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54125 45 + 372756 TCTGAGTTTGGCTCTGTGACCTCTGTAC-CCTCCCAAAGGGGACAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290251 45 + 16356641 TCTGAGTGTGGCTCTGTGACCTCTGTAC-CCTCCCAAAGGGGACAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1159566 45 + 1231380 TCTGAGTTTGGCTCTGTGATCTCTGTAC-CCTCCCAAAGGGGACAG i cebCap1.NW_016107870v1 C 0 I 9 s aotNan1.NW_018500483v1 2691875 36 + 11732439 ---------GGCTCTGTGACCTCTGTAC-CCTCCCAAAGGGGACAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1866102 45 - 2029793 TCTGAGTTTAGCTCTGTGACTTCTGCAG-CCTCCCAGAGGGGGCAT i proCoq1.NW_012150197v1 I 534 C 0 s otoGar3.GL873542 22853648 45 + 22939663 -TTGAGTTTAGCTTTGCGCCTTCTGCAACCCTCCCAAAGGGTTCGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181800539 31 + 182113224 TCTGAGCTTGGCTCTGGCA------TGG-CCTATCAAA-------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47614065 43 + 47698779 GCAGAGTGTGGC--CGGGGCCTCCACAC-TCTCCCAGAGGCCATGA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56871018 902 + 57149010 I e dasNov3.JH569290 249619 644 - 397369 M a score=58315.000000 s hg38.chr20_KI270870v1_alt 119198 10 + 183433 -C--TCTCGTCCA s panTro5.chr20 66445409 10 + 66533130 -C--TCTCGTCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120555 10 + 62195757 -C--TCTTGTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509731 8 - 578057 -C--TC--GTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110031514 8 - 110113093 -C--TC--ATCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762420 8 - 92844088 -C--TC--GTCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429789 8 + 96509753 -C--TC--GTCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901111 8 - 16982598 -C--TC--GTCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703368 8 - 3785965 -C--TC--GTCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282679 8 - 90373283 -C--TC--GTCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87200 8 - 179258 -C--TC--GTCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573026 8 - 5823884 -C--TT--GTCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54170 8 + 372756 -C--GC--GTCTA i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16290296 8 + 16356641 -C--GC--GTCTA i saiBol1.JH378156 C 0 I 1 s aotNan1.NW_018500483v1 2691911 8 + 11732439 -C--GC--ATCTG i aotNan1.NW_018500483v1 C 0 I 1 s proCoq1.NW_012150197v1 1866147 10 - 2029793 -CTTTC--ATCCA i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22853693 8 + 22939663 -C--TC--ATCCA i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47614108 9 + 47698779 CC--CC--ATCTA i canFam3.chr24 C 0 C 0 e mm10.chr2 181800570 0 + 182113224 C e micMur3.chr18 56871018 902 + 57149010 I e dasNov3.JH569290 249619 644 - 397369 M e cebCap1.NW_016107870v1 1159611 9 + 1231380 I a score=35422.000000 s hg38.chr20_KI270870v1_alt 119208 5 + 183433 AAGGT s panTro5.chr20 66445419 5 + 66533130 GAGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120565 5 + 62195757 GAGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509739 5 - 578057 AAGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110031522 5 - 110113093 AACGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762428 5 - 92844088 AAGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429797 5 + 96509753 AAGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901119 5 - 16982598 AAGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703376 5 - 3785965 AAGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282687 5 - 90373283 AAGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87208 5 - 179258 AAGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573034 5 - 5823884 AAGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54179 5 + 372756 AAGGT i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16290305 5 + 16356641 AAGGT i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1159620 5 + 1231380 AAGGT i cebCap1.NW_016107870v1 I 9 C 0 s aotNan1.NW_018500483v1 2691920 5 + 11732439 AAGGT i aotNan1.NW_018500483v1 I 1 C 0 s proCoq1.NW_012150197v1 1866158 4 - 2029793 AAAG- i proCoq1.NW_012150197v1 I 1 I 1 s otoGar3.GL873542 22853702 4 + 22939663 AAAA- i otoGar3.GL873542 I 1 I 1 s mm10.chr2 181800570 5 + 182113224 AAGAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47614117 3 + 47698779 -GGA- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56871018 902 + 57149010 I e dasNov3.JH569290 249619 644 - 397369 M a score=1709718.000000 s hg38.chr20_KI270870v1_alt 119213 140 + 183433 GTTTCACTGAGATGTCAGCTCTGCTCTGAGGGTCC-TCCGTGTTCCTGCTGGTCCCTATACTCTATAGTGACC-GGCCTGGACCTGCAGAGGCTAGAAGAGGTCGATAACTGAGATTtgg-gtttacatttctgcccaggc--at s panTro5.chr20 66445424 140 + 66533130 GTTTCACTGAGATGTCAGCTCTGCTCTGAGGGTCC-TCCGTGTTCCTGCTGGTCCCTACACTCTATAGTGACC-GGCCTGGACCTGCAGAGGCTAGATGAGGTCGATAACTGAGATTtgg-gtttaaatttctgcccaggc--at i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120570 140 + 62195757 GTTTCACTGAGATGTCAGCTCTGCTCTGAGGGTCC-TCCGTGTTCCTGCTGGTCCCTACACTCTATAGTGACC-GGCCTGGACCTGCAGAGGCTAGATGAGGTCGATAACTGAGATTtgg-gtttaaatttctgcccaggc--at i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509744 140 - 578057 GTTTCACTGAGATGTCAGCTCTGCTCTGAGGGTCC-TCCGTGTTCCTGCTGGTCCCTATGCTCTATAGTGACC-GGCCTGGACCTGCAGAGGCTAGATGAGGTCGATAACTGagatttgg-atttaaatttctgcccaggc--at i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110031527 143 - 110113093 GTTTCACTGAGATGTCAGCTCTGCTCTGAGGGTCC-TCCGTGTTCCTGCTGGTCCCTACACTCTACAATGACCGGGCCTGGACCTGCAGAGGCTAGATGAGGTCAATAACTGAGATTTGG-GTTTAAATTTCTGCCCAGGCATAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762433 138 - 92844088 GTTTCACTGAGACGTCAGCTCTGTTCTGAGGGTCC-TCTGTGCTCCTGCTGGTCCCTGCACTCTGTAGTGGCC-AGCCTGGTCCTGCAGAGTCTAGATGAGGTCAATAAC--AGATGTGG-GTTTAAATTTCCGCCCAGAC--GT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429802 138 + 96509753 GTTTCACTGAGACGTCAGCTCTGTTCTGAGGGTCC-TCTGTGCTCCTGCTGGTCCCTGCACTCTGTAGTGGCC-AGCCTGGTCCTGCagagtctagatgaggtcaataac--agatgtgg-gtttaaatttccgcccagac--gt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901124 138 - 16982598 GTTTCACTGAGACGTCAGCTCTGTTCTGAGGGTCC-TCTGTGCTCCTGCTGGTCCCTGCACTCTGTAGTGGCC-AGCCTGGTCCTGCAGAGTCTAGAtgaggtcaataac--agatgtgg-gtttaaatttccgcccagac--gt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703381 138 - 3785965 GTTTCACTGAGACGTCAGCTCTGTTCTGAGGGTCC-TCTGTGCTCCTGCTGGTCCCTGTACTCTGTAGTGACC-AGCCTGGTCCTGCAGAGTCTAGATGAGGTCAATACc--agatgtgg-gtttaaatttccgcccagat--gt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282692 138 - 90373283 GTTTCACTGAGACGTCAGCTCTGCTCTGAGGGTCC-TCTGTGCTCCTGCCGGTCCCTGCACTCTGTAGTGACC-AGCCTGGTCCTGCAGAGTCTAGttgaggtcaataac--agatgtgg-gtttaaatttccgcccagac--gt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87213 138 - 179258 GTTTCACTGAGACGTCAGCTCTGTTCTGAGGGTCC-TCTGTGCTCCTGCTGGTCCCTGCACTCTGTAGTGACC-AGCCTGGTCCTGCAGAGTCTAGATGAGGTCAATAAC--AGATGTGG-GTTTAAATTTCCGCCCAGAC--GT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573039 138 - 5823884 GTTTCACTGAGACGTCAGCTCTGCTGTGAGGGTCC-TCGGTGCTCCCGCTGGTCCCTGCGCTCTAGAGTGACC-AGACTGGTCCTGCagagtctagatgaggtcaataac--agatttgg-gtttaaatttctgcccagac--gt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54184 132 + 372756 GTTTCACTGAGACGTCAGCTCTGCTCTGAGGGTCC-TCTGTGTTCCTGCTGGTCCCTA-------CAGTGACC-AGCCTGGGCTTGCAG-GGctagacgaagtcaataactgagatttgg-gtttaagtttctgcccaggc--gt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290310 139 + 16356641 GTTTCGCTGAGACGTCAGCTCTGCTACGAGGGTCC-TCTGTGTTCCTGCTGGTCCCTACACACTGCAGTGACC-GGCCTGGGTTTGCag-ggctagacgaagtcagtaactgagatttgg-gcttaagtttctgcccaggc--ag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1159625 138 + 1231380 GTTTCACTGAGATGTCCGCTCTGCTCTGAGGATCC-TCTGGGTCCCTGCTGGTCCCCACACGCTGCAGTGACC-AGCCTGGGCTTGCAG-GGCTAGAAGAAGTCAATAGCTGagatttgg-gtttaagtttctg-ccagac--gt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2691925 138 + 11732439 GTTTCACTGAGACGTCAGCTCTGCTCTGAGGGTCC-TCTCTGTTCCCGCTGGTCCCTACACGCTGCAGCGACC-GGCCTGGGCTTGCAG-GGCTAGATGGAGTCAATAACTGAGATTTGG-GTTTAAGCTTCTC-CCAGGT--GT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56871920 139 + 57149010 GTTTCTCTGGGATGTCGGCTGTGCTCTAAGGACCCTTCT-TGTCCCTTCTGGTCCCCATGCTCAGTAGTGACC-TGCCTGGGCCTGCAGAGGCCAGATGCGGCCAGTGACTGGGATTTgg--tttaaatttctgcccaggc--at i micMur3.chr18 I 902 I 317 s proCoq1.NW_012150197v1 1866163 141 - 2029793 GTTTCTCTGAGGCGTCGGCTGTGCTCTAAGGGCCCTTCTGTGTCCCTTCTGGTCCCCATGCTCAGTAGTGACC-TACCTGGGCCCGCAGAAGCCAGATGTGGTCTGTGACTGGGATTtgg-ttttcaatttctgcccacac--ac i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22853707 141 + 22939663 ATTTTTCTGGGTTATCAGCTATGCTCTAAGGATCCTTCTGTGTCCCTTCTGGTCCCCATGCTTGATTGTGACC-TACCTGGGCCTGTAGAGGCTGGAtgaggtcagcagcagagctttgg-tcttaaattgctgcctgggc--at i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181800575 122 + 182113224 GTTTCTCTGAGACATCA---------TGAGGACCC-CCATT--TTCTTCTGATTGCCACACT---TAGTAGTC-AACATGTACTTATAG-----AGGTGAGGTTGGCAACTGAAATTTGGAGTTTAATTTTCTGCTCAGGT--AT i mm10.chr2 C 0 C 0 s canFam3.chr24 47614120 121 + 47698779 CTTTCTGTGGGACATCGGCCATGCTTTGGGGATCG-TCA---------------CCCACACTC---AGTGGCC-CTCCTGG-CCCACAGAAGCTACATGAGATCAGCAGCTGACATTTGA-GTTTACATTCCTGCCCGTGC--TT i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 249619 644 - 397369 M a score=301331.000000 s hg38.chr20_KI270870v1_alt 119353 24 + 183433 agattagtcatgcagccttggata s panTro5.chr20 66445564 24 + 66533130 agattagtcatgcagccttggata i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120710 24 + 62195757 agattagtcatgcagccttggata i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509884 24 - 578057 agattagtcatgcagccttggata i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110031670 24 - 110113093 ATATTAGTCATGCAGCCTTGGATA i nomLeu3.chr13 C 0 M 367 s rheMac8.chr10 92762571 24 - 92844088 ATGTTAGTCATGCAGCCTTGGATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429940 24 + 96509753 atgttagtcatgcagccttggata i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901262 24 - 16982598 atgttagtcatgcagccttggata i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703519 24 - 3785965 atgttagtcatgcagccttggata i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282830 24 - 90373283 atgttagtcatgcagccttggaca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87351 24 - 179258 ATGTTAGTCATGCAGCCTTGGATA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573177 24 - 5823884 atatgagtcacgcagccttggata i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54316 24 + 372756 acattagtcatgcagccttgggtg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290449 24 + 16356641 acattagtcatgcagccttgggtg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1159763 24 + 1231380 acattagtcatgcagccttgggtg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692063 24 + 11732439 ACGTTAGTCATGCAGCGTCGGGTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1866304 24 - 2029793 ttcttagtcatgcagccttgggaa i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22853848 24 + 22939663 ttattagtcatgcagccttgagta i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181800697 24 + 182113224 TTATTAAGGATATAGATTTAGATA i mm10.chr2 C 0 C 0 s canFam3.chr24 47614241 24 + 47698779 TTCATAGTCGTGCGGCTTCGGGCA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56872059 317 + 57149010 I e dasNov3.JH569290 249619 644 - 397369 M a score=719752.000000 s hg38.chr20_KI270870v1_alt 119377 71 + 183433 agttactcaactcctttgtcttcctcgttttgtcaaatCCCAAGGATATCTCCTGGCAGGAATATTGCCAA s panTro5.chr20 66445588 71 + 66533130 agttactcaactcctttgtcttcctcgttctgtcaaatCCCAAGGATATCTCCTGGCAGGAATATTGCCAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120734 71 + 62195757 agttactcaactcctttgtcttcctcgttctgtcaaatCCCAAGGATATCTCCTGGCAGGAATATTGCCAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509908 71 - 578057 agttactcaactcctttgtcttcctcattttatcaaatcccaaggatatctcctggcaggaatattgCCAA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92762595 71 - 92844088 AGTTTCTTAGCTCCTTCGTCCTCCTCGTTTTGTCAAATTCCAAGGACATCTCCTGGCAGGAATGTTGCCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96429964 71 + 96509753 agtttcttagctccttcgtcctcctcgttttgtcaaattccaaggacatctcctggcaggaatgttgCCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901286 71 - 16982598 agtttcttagctccttcgtcctcctcgttttgtcaaattccaaggacatctcctggcaggaatgttgCCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703543 71 - 3785965 agtttcttagctccttcgtcctcctcgttttgtcaaattccaaggacatctcctggcaggaatgttgCCAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282854 71 - 90373283 agtttcttagctccttcgtcctcctcgttttgtcaaattccaaggacatctcctggcaggaatgttgCCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87375 71 - 179258 AGTTTCTTAGCTCCTTCGTCCTCCTCGTTTTGTCAAATTCCAAGGACATCTCCTGGCAGGAATGTTGCCAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573201 71 - 5823884 agtttcttagctcctttgtcctcctcgtgttgtcagattccaaggacatctcctggcaggaatattgCCAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54340 66 + 372756 agttactgaacccctttgtcctc----tttttGCAAATCCC-AGGATATCTCCTGGCAGGAATATTGTCAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290473 66 + 16356641 agttactgaacccctttgtcctc----tttttGCAAATCCC-AGGACATCTCCTGGCAGGAATATTGTCAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1159787 66 + 1231380 agttactgaacccctttgtcctc----tttttGCAAATCCC-AGGACATCTCCTGGCAGGAACATTGTCAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692087 66 + 11732439 AGTTACTGAACACCTTTGTCCTC----TTTTTGCAAATCCC-AGGACATCTCCTGGCAGGAATATTGTCAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1866328 71 - 2029793 aggtgcttgacctcttcgtcctcCTTGTTTTGTCTAATCCCAGGGATGTCTCCTGGCAGGGACGTTGCCAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22853872 70 + 22939663 aggca-ttaacctctatgcccttcttgttttgtcaAATCCCAAGGATGTCTCCTGGCAGGAGCATTGCCAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181800721 69 + 182113224 AGTCATATAA--TCTGTGTCTCCCTCATTTTATCAAGTCTCAAGGACACCTTTTCTCAAGGGTATTGATAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47614265 68 + 47698779 AGTTAGCATCCGTTTTTGTCCTT---GTTTTGTCAAATCCAAAGGACACGTCCCGGCAAGGAACGTGTCAC i canFam3.chr24 C 0 C 0 e micMur3.chr18 56872059 317 + 57149010 I e dasNov3.JH569290 249619 644 - 397369 M e nomLeu3.chr13 110031694 367 - 110113093 M a score=1083052.000000 s hg38.chr20_KI270870v1_alt 119448 102 + 183433 ACGCCTTGACCTCTCTAGGCAGAAGGCTGACCC----------------------------------------------ATGAGG-CCTCCACACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCGGCCGTCTGGGTTGTTCTCCTTA s panTro5.chr20 66445659 102 + 66533130 ACGCCTTGACCTCTCTAGGCAAAAGGCTGACCC----------------------------------------------ATGAGG-CCTCCACACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCTGCCATCTGGGTTGTTCTCCTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120805 102 + 62195757 ACGCCTTGACCTCTCTAGGCAAAAGGCTGACCC----------------------------------------------ATGAGG-CCTCCACACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCTGCCATCTGGGTTGTTCTCCTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 509979 102 - 578057 ACGCCTTGACCTCTCTAGGCAGAAGGCTGACCC----------------------------------------------ATGAGG-CCTCCACACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCTGCCATCTGGGTTGTTCTCCTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032061 102 - 110113093 ACGCCTTGACCTCTCTAGGCAGAAAGCTGACCC----------------------------------------------GTGAGG-CCTCCACACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCTGCCATCTGGGTTGTTCTCCTTA i nomLeu3.chr13 M 367 C 0 s rheMac8.chr10 92762666 102 - 92844088 ACGCCTTGACCTCTCTGGGCAGAAGCCTGACCC----------------------------------------------ATGAGG-CCTCCGCACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCTGCCGTCTGGGTGGTTCTCCGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430035 102 + 96509753 ACGCCTTGACCTCTCTGGGCAGAAGCCTGACCC----------------------------------------------ATGAGG-CCTCCGCACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCTGCCGTCTGGGTGGTTCTCCGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901357 102 - 16982598 ACGCCTTGACCTCTCTGGGCAGAAGGCTGACCC----------------------------------------------ATGAGG-CCTCCGCACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCTGCCGTCTGGGTGGTTCTCCATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703614 102 - 3785965 ACGCCTTGACCTCTCTAGGCAGAAGCCTGACCC----------------------------------------------ATGAGG-CCTCCGCACTGTCAG-AGGAGAGAGGAAGGAGGACTCCAGCTGCCGTCTGGGTGGTTCTCCGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90282925 100 - 90373283 ACGCCTTGACCTCTCTAGGTCTAGGA--GACCC----------------------------------------------ATGAGA-CCTCCGCACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCTGCCATCTGGGTGGTTCTCCTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87446 102 - 179258 ACGCCTTGACCTCTCTAGGCAGAAGCCTGACCC----------------------------------------------ATGAGG-CCTCCGCACTGTCAG-AGGAGAGAGGAAAGAGGACTCCAGCTGCCGTCTGGGTGGTTCTCCGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573272 102 - 5823884 ACGCCTTGACCTCTCTAGGCAGAAGGCTGACCC----------------------------------------------ATGAGG-CCTCCGCACTGTCAG-AGGAGAGAGGAAAGAGGACTGCAGCTGCCATCTGGGTTGTTCTCCTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54406 103 + 372756 ACGCCTTGACCTCTCTAGGCAGAAGGCTGAACC----------------------------------------------TGGAGGCCCCCTGCACTGTCAG-AGGAGAGAGGAAAGAGGCTGGCAGCTGCCCTGTGGGTTGCTCTCCTTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290539 102 + 16356641 ACGCCTTGACCTCTCTAGGCAGAAGGCTGACCC----------------------------------------------TTGAGG-CCCCTGCGCTGTCAG-AGGAGAGAGGAAAGAGGCCTGCAGCTGCCCTCGGGGTTGCCCTCCCTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1159853 102 + 1231380 ACGCCTTGACCTCTCTAGGTAGAAGGCTGACCC----------------------------------------------CCGATG-CCCCCGCGCTGTCAG-AGGAGAGAGGAAAGAGGCCTGCAGCTGTCCTCGGGGTTGCTCTCCTTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692153 102 + 11732439 ACGCCTTGACCTCTCCAGGCAGAAGGCTGACGC----------------------------------------------TCGCGG-CCCCCGCACTGTCAG-AGGAGAGAGGAAAGAGGCCTGCAGCTGCCCTCTGGGTTGCTCTCCTTA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1866399 93 - 2029793 ATGCCTTCACCTCTCCGCAC---GGG----CCT----------------------------------------------GCGAGG-CCTCCACACTGTCAGCACAAG-GAGGAAAGAGGACTCTAGCTGCCATC-GGACTGTTG-CTTTA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22853942 98 + 22939663 ATGCCTTCACCTCTCTGCACAGAAGG----CCT----------------------------------------------GTGAGG-CTACCACCTTGTCAGCAGGAGAGAGGAAAGAAGGCTCCAGTTGCCGTCGGGACTGCTC-TTTTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181800790 48 + 182113224 ATACTTT----------------------ACCT----------------------------------------------GCAAGG-CTTACACAGTGCCTA-----------------CACTCCAGCTACTGTC---------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47614333 148 + 47698779 -ATCTCTCACCTCTCTATGCAGAGGCTGGACCTCAAGGCATGGGGGCTCTCGGAGGCACGGTCCCCCCCGACGGAGCCAGTGAGA-CTCACACAATCTCCGCGGGAGTGGGGTGCGCGGGTGCCGGCTGCCCCCCAGGGCGTCTTCTTTA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56872059 317 + 57149010 I e dasNov3.JH569290 249619 644 - 397369 M a score=1179419.000000 s hg38.chr20_KI270870v1_alt 119550 139 + 183433 AAACGCTGCACAAACTGCTAT----TTGGGATTGTCAGGGCAGCCTCAGGGCTTC--CGCACA-GGCAGCCAGTGTGGGCTGGTTTCTTCAGGGTCTCCTG------ACTGTCCAGCCCC-AGTCCCTGTTCAAGCTCATGGGCAG-TCTCGCC s panTro5.chr20 66445761 139 + 66533130 AAACGCTGCACAAACTGCTAT----TTGGGATTGTCAGGGCAGCCTCAGGGCTTC--CTCACA-GGTAGCCAGCGTGGGCTGGTTTCTTCAGGGTCTCCTG------ACTGTCCAGCCCC-AGTACCTGTTCAAGCTCATGGGCAG-TCTTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62120907 139 + 62195757 AAACGCTGCACAAACTGCTAT----TTGGGATTGTCAGGGCAGCCTCAGGGCTTC--CGCACA-GGTAGCCAGCGTGGGCTGGTTTCTTCAGGGTCTCCTG------ACTGTCCAGCCCC-AGTCCCTGTTCAAGCTCACGGGCAG-TCTCGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510081 139 - 578057 AAACGCTGCACAAACTGCTAT----TTGGGATTGTCAGGGCAGCCTCAGGGCTTC--CGCACA-GGTAGCCAGTGTGGGCTGGTTTCTTCAGGGTCTCCTG------ACTGCCCAGCCCC-AGTCCCTGTTCAAGCTCATGGGCAG-TCTCGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032163 139 - 110113093 AAACGCTGCACAAACTGCTAT----TTGGGATGGTCAGGGCAGCCTCAGGGCTTT--CGCACA-GGTAGCCAGTGTGGGCTGGTTTCTTCAGGGTCACCTG------ACTGTCCAGCCCC-AGTCCCTGTTCAAGCTCATGGGCAG-TCTCGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762768 141 - 92844088 AAACGCTGCACAAACCGCTAT----TTGGGATGGTCAGGGCAGTATCAGGGCTTTTGCACACA-GGTAGCCAGTGTGGGCTGGTTTCTTCAGGGTCACCTG------ACTGTCCAGCCCC-AGTCCCTGTCCGAGCTCATGGGCAG-TCTTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430137 141 + 96509753 AAACGCTGCACAAACCGCTAT----TTGGGATGGTCAGGGCAGTATCAGGGCTTTTGCACACA-GGTAGCCAGTGTGGGCTGGTTTCTTCAGGGTCACCTG------ACTGTCCAGCCCC-AGTCCCTGTCCAAGCTCATGGGCAG-TCTTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901459 141 - 16982598 AAACGCTGCACAAACCGCTAT----TTGGGATGGTCGGGGCAGTATCAGGGCTTTTGCACACA-GGTAGCCAGTGTGGGCTGGTTTCTTCAGGGTCACCTG------ACTGTCCAGCCCC-AGTCCCTGTCCAAGCTCATGGGCAG-TCTTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703716 141 - 3785965 AAACACTGCACAAACTGCTAT----TCGGGATGGTCAGGGCAGTATCAGGGCTTTTGCACACA-GGTAGCCAGTGTGGGCTAGTTTCTTCAGGGTCACCTG------ACTGTCCAGCCCC-AGTCCCTGTCCAAGCTCATGGGCAG-TCTTGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283025 141 - 90373283 AAACACTGCACAAACTGCTAT----TTGGGATGGTCAGGGCAGTATCAGGGCTTTTGCACACA-GGTAGCCAGTGTGGGCTGGTTTCTTCAGGGTCACCTG------ACTGTCCAGCCCC-AGTCCCTGTTCAAGCTCATGGGCAG-TGTTGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87548 141 - 179258 AAACACTGCACAAACCGCTAT----TTGGGTTGGTCAGGGCAGTATCAGGGCTTTTGCACACA-GGTAGCCAGTGTGGGCTGGTTTCTTCAGGGTCACCTG------ACTGTCCAGCCCC-AGTCCCTGTCCAAGCTCATGGGCAG-TCTTGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573374 141 - 5823884 AAACACTGCACAAACTGCTAT----TTGGGATGGTCAGGGCAGTATCAGGGCTTTTGCACACA-GGTAGCCAGTGTGGGCTGGTTTCTTCAGGGGCACCTG------ACTGTCCAGCCCC-AGTCGCCGTTCAAGCTCATGGGCAG-TCTTGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54509 102 + 372756 GAATACTGCACATCCTGTTAT----TTGGGATAGTCAGGGT----------------------------------------GGTCTCTTCAGGGTCACCTC------ACTGCCCAGCCCC-AGTCCCTGTTCAAGCTCACCGGCAG-TCTTGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290641 97 + 16356641 GAACACTGCACATGCTGTTAT----TTGGGATAGTCAGGGC----------------------------------------GGTCTCTTCAGGGTCCCCTC------A-TGCGCAGCCCC-AGGCCTTGTTCAAGCTCACCGGCAG-TCT---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1159955 101 + 1231380 GAACACTGCGCATCCTGTTAT----TTGGCATCGTCAGGGC----------------------------------------GGTCCCTTCAGGGTCACCTC------A-TGCGCAGCCCC-AGTCCTTGTTCAAGCTCACCGGCAG-TCTTGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692255 102 + 11732439 GAACACCACACATCCTGTTAT----TTGGGATAGTCAGGGC----------------------------------------GGTCTCTTCAGGGTCACCTC------ACTGCCCAGCCCC-AGTCCTTGTTCAAGCTCACCGGCAG-TCTTGCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1866492 141 - 2029793 AAATGCTGCGCATCCTACTCT----TTGGGGTGGTTGGGGCAGTCTCTGGGCTTTTGTACGCA-AACGGCCAGTGTGGGCCGGTTTCTCCAGGGTCATCTC------ACTGTCCAGCCCCTGGTCCCTTTTTGAGCTCCTGGGCAATTCTCA-- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22854040 126 + 22939663 AAATGCTGCACATCCTACTGT----TCAGTGTATTTGGGGTGTTCTCTGAACTTTTCCATGCA-AATAGCCAGTGTAGGCCAGTTT----------------------CTGTCCAGCTCCTGATCCCTTTTTGAGCTCCTGGACAA-TCTCACA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181800838 82 + 182113224 ----------CATCCTCCTAT----ATGGGGTGGAAAGAACATTCCCTGGGCTTT---------------------GGAGCAGCTTTTCTGGAGTTGCTTC------ACT-TTCAGCTTC-TGCC----------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47614481 113 + 47698779 AAATGCTGCACATCCTGCCAG----G-GGGACACTTTGGACAGCCTC----------------------------------GGCTTCCATGAGGACCGCTGCCCAGAACTATCCAGCCCC-CAGGCCCCCTCGGGCTCTTGGGCGG-TCTGGCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 250267 128 - 397369 AAGCACTGTGTGTCCTGCTGTGTGGCTGGCATAGGCCGGGCAGTGCTGGGCTTCCTATTTCCAGGGCAGCTGGCATGGACCAGGCTCTTGAGGG------A------ACCCCCCTGCCCT-GG-----------ATTCCCGGGCGG-TGGATC- i dasNov3.JH569290 M 644 C 0 e micMur3.chr18 56872059 317 + 57149010 I a score=353822.000000 s hg38.chr20_KI270870v1_alt 119689 24 + 183433 TCCCTTCTCTCTGGACAGCCAGAG s panTro5.chr20 66445900 24 + 66533130 TCCCTTCTCTCTGGACAGCCAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121046 24 + 62195757 TCCCTTCTCTCTGGACAGCCAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510220 24 - 578057 TCCCTTCTCTCTGGACAGCCAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032302 24 - 110113093 TCCCTTCTCTCTGGACAGCCAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762909 24 - 92844088 TCTCTTCTCTCTGGACAGCCAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430278 24 + 96509753 TCTCTTCTCTCTGGACAGCCAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901600 24 - 16982598 TCTCTTCTCTCTGGACAGCCAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703857 24 - 3785965 TCTCTTCTCTCTGGACAGCCAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283166 24 - 90373283 TCTCTTCTCTCTGGACAGCCAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87689 24 - 179258 TCTCTTCTCTCTGGACAGCCAGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573515 24 - 5823884 TCTCTTCTCTCTGGACGGCCAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54611 24 + 372756 TCCCTTCTCTCTGGACAGGCAGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290738 13 + 16356641 -----------TGGACAGCCAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160056 24 + 1231380 TCCCTTCTGTCTGGACAGCCAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692357 24 + 11732439 TCCCTTCTGTTTGGACAGCCAGAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56872376 24 + 57149010 TCCCTTCTCTCTGGACAGCCAGAG i micMur3.chr18 I 317 I 25 s proCoq1.NW_012150197v1 1866633 23 - 2029793 TCCCTTCTCTCT-GACAGCCAGAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22854166 24 + 22939663 TCCCTTCTCTTTGGACAGCCAGAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181800920 19 + 182113224 -----TTTCTTGGATCAGTAAAAG i mm10.chr2 C 0 I 5 s canFam3.chr24 47614594 23 + 47698779 -ATCTCCTCTCCGGACGCCTGGAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 250395 16 - 397369 ATTCTTTTCTCTGGAT-------- i dasNov3.JH569290 C 0 C 0 a score=387137.000000 s hg38.chr20_KI270870v1_alt 119713 36 + 183433 AGAGGGTTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT s panTro5.chr20 66445924 36 + 66533130 AGAGGGTTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121070 36 + 62195757 AGAGGGTTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510244 36 - 578057 AGAGGGTTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032326 36 - 110113093 AGAGGGTCCCTGAGCTACTCC--TGCCCC-CTCTCTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762933 36 - 92844088 AGAGGGGTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430302 36 + 96509753 AGAGGGGTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901624 36 - 16982598 AGAGGGGTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703881 36 - 3785965 AGAGGGGTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283190 36 - 90373283 AGAGGGGTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87713 36 - 179258 AGAGGGGTCCTGAGCTACCCC--TGCCCA-CTCTCTGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573539 36 - 5823884 AGAGGGGTCCTGAGCTACCCC--TGCCCC-CTCTCTGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54635 35 + 372756 AGAGGGTTCATGAGCTACCCC--TGCCC--CTCCCTGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290751 35 + 16356641 AGAAGGTTCACGAGCTTCCCC--TGCCC--CTCCCTGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160080 33 + 1231380 AGAAGGTTCA--AGCTACCCC--TGCCC--CTCGCGGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692381 35 + 11732439 AGACGGTTCACGAGCTACCCC--TGCCC--CTCCCTGCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1866656 36 - 2029793 TGAGGGGCCATGAGCTGTTTC--TGTCCC-CTCCCTGCT i proCoq1.NW_012150197v1 C 0 I 7 s otoGar3.GL873542 22854190 37 + 22939663 TGAGGGGTCATGAGCCGTTTC--TGCCCCTTTCCCTGCT i otoGar3.GL873542 C 0 I 14 s mm10.chr2 181800944 26 + 182113224 -------ACAGGAACTGTTCC--TACCT--CTCCCTT-- i mm10.chr2 I 5 C 0 s canFam3.chr24 47614617 37 + 47698779 CGGAGGATCACG-GCTGTCCCGATCTCCC-CCCTCGGCC i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 250411 19 - 397369 -------------GCCACCCA------CC-CCCTCTGCT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56872400 25 + 57149010 I a score=3607137.000000 s hg38.chr20_KI270870v1_alt 119749 194 + 183433 ---CACCA---CCCAGCTTCCTG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT s panTro5.chr20 66445960 194 + 66533130 ---CACCA---CCCAGCTTCCTG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121106 194 + 62195757 ---CACCA---CCCAGCTTCCTG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510280 196 - 578057 ---CACCA--CCCCAGCTTCCTG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACCGGGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032362 193 - 110113093 ---CACCA--CCCCA--TTCCTG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92762969 194 - 92844088 ---CACCA---CCCAGCTTCCGG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430338 194 + 96509753 ---CACCA---CCCAGCTTCCGG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901660 194 - 16982598 ---CACCA---CCCAGCTTCCGG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3703917 194 - 3785965 ---CACCA---CCCAGCTTCCGG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283226 194 - 90373283 ---CACCA---CCCAGCTTCCGG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87749 194 - 179258 ---CACCA---CCCAGCTTCCGG----GCT-----CTAACTGATGTGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573575 194 - 5823884 ---CACCA---CCCAGCTTCCTG----GCT-----CTAACTGATGCGACTTGTGTGT----TTTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGCGATGGCACTGGCCACGTTACC-GGGTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCGGAGAGTGAGTAGCTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54670 194 + 372756 ---TACCA---CCCAGCTTCCTG----GCT-----CTAACTGATGCAACTTGTGTGT----TTTAGATCCATCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCCACGCCAGGCTGTGATGGCACTGGCCATGTTACC-GGCTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290786 192 + 16356641 ---CACCA---CCCAGCTTCCCG----GCT-----CTAACTGATGCAACT--TATGT----TTTAGATCCATCGAGAGCTGAGAAGCGTGAGATCAAGTGCCCAACGCCAGGCTGTGATGGCACTGGCCATGTTACT-GGCCTGTACCCTCACCACCGCAGCCTTTCCGGCTGTCCCCACAAGGACAGGATCCCCCCAGAGAGTGAGTAGCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160113 194 + 1231380 ---CACCA---CCCAGCTTCCCT----GCT-----CTAACTGATGCAACTCGTGTGT----TTTAGATCCATCAAGAGCCGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCATGTCACC-GGCCTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGACAGGATCCCCCCAGAGAGTGAGTAGCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692416 194 + 11732439 ---CAGCA---CCCAGCTTCCCG----GCT-----CTAACCGATGCAACTTGTGTGT----TTTAGATCCACCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACGCCGGGCTGTGATGGCACCGGCCATGTTACT-GGCTTGTACCCTCACCACCGCAGCCTTTCTGGCTGTCCCCACAAGGATAGGATCCCCCCAGAGAGTGAGTAGCCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56872425 194 + 57149010 ---CACCA---CCCAGCTTCCTG----GCT-----CTAACTGGTGCGTCTTGTGCAT----TTTAGATCCATCGAGAGCTGAGAAGCGGGAGATCAAGTGTCCGACACCAGGCTGTGACGGCACTGGCCACGTCACT-GGCTTGTACCCGCACCACCGCAGCCTGTCGGGCTGCCCCCACAAGGACAGGATCCCCCCGGAGAGTGAGTAGCTCT i micMur3.chr18 I 25 I 36 s proCoq1.NW_012150197v1 1866699 194 - 2029793 ---TGCCA---CCCAGCTTCCTG----GCT-----CTAACCGGTGCGTCTTGTGTGT----TTTAGATCCCTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCGACACCAGGCTGCGATGGCACTGGCCACGTCACC-GGGTTGTACCCTCACCACCGCAGCCTGTCTGGCTGTCCCCACAAGGACAGGATCCCCCCGGAGAGTGAGTAGCTCT i proCoq1.NW_012150197v1 I 7 C 0 s otoGar3.GL873542 22854241 191 + 22939663 ---TACCA---CCCAGCTTCCCA----GCT-----CTGACTGA---GTCTTATGTGT----TCTAGATCCTTCAAGAGCTGAGAAGCGTGAGATCAAGTGTCCAACACCAGGCTGTGATGGCACTGGCCATGTTACT-GGGCTGTACCCTCACCACCGCAGCCTGTCTGGCTGTCCCCACAAGGATAGGATCCCTCCGGAGAGTGAGTAGCCCC i otoGar3.GL873542 I 14 C 0 s mm10.chr2 181800970 193 + 182113224 -----------CCCAGTCTCCTA----GCT-----TTGCATAATATGTCCTATGTGTTTTATTTAGATCCTTCCAGGGTGGAGAAGCGTGAAATCAAGTGTCCGACACCTGGCTGTGATGGCACTGGCCATGTTACT-GGATTGTACCCTCATCACCGCAGCCTGTCTGGCTGTCCCCACAAGGATAGAATCCCTCCAGAGAGTGAGTAGCTTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47614656 197 + 47698779 ---CGCCG---TGCGGCCCTTGGCTCCTCT-----CTAAGCGATGCATCTTGTGTA-----TTTAGATCCCTCAAGAGCCGAGAAGCGTGAGATCAAGTGTCCAACGCCAGGCTGTGACGGCACCGGCCACGTTACG-GGGCTGTACCCTCACCACCGCAGCCTGTCTGGGTGCCCCCACAAGGACAGGATCCCCCCCGAGAGTGAGTAGCTGT i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 250430 203 - 397369 TGTCACCTACCCCCAGCTGCCTT----GCCTGCCACCAACCGATGCTTCCTGTGCAT----TTCAGACCCTTCCAGAGCTGAAAAGCGCGAGATCAAATGTCCAACGCCAGGCTGTGATGGCACCGGGCACGTGACC-GGCCTGTACCCACACCACCGCAGCCTGTCGGGCTGCCCCCACAAAGACAGGATCCCCCCGGAGAGTGAGTGGCC-- i dasNov3.JH569290 C 0 C 0 a score=344033.000000 s hg38.chr20_KI270870v1_alt 119943 37 + 183433 GTGCAGCGTTAGCCCTAACTGTGAAGCTCA-----------------------CGCTGCC s panTro5.chr20 66446154 37 + 66533130 GTGCAGCGTTAGCCCTAACTGTGAAGCTCA-----------------------CGCTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121300 37 + 62195757 GTGCAGCGTTAGCCCTAACTGTGAAGCTCA-----------------------CGCTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510476 37 - 578057 GTGCAGCGTTAGCCCTAACTGTGAAGCTCA-----------------------CGCTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032555 37 - 110113093 GTGCAGCGTCAGCCCTAACTGTGAAGCTTA-----------------------GTCTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92763163 37 - 92844088 GTGCAGCGTTAGCCCTAACTCCGAAGCTCA-----------------------GGCTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430532 37 + 96509753 GTGCAGCGTTAGCCCTGACTCCGAAGCTCA-----------------------GGCTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901854 37 - 16982598 GTGCAGCGTTAGCCCTAACTCCGAAGCTCA-----------------------GGCTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704111 37 - 3785965 GTGCAGCGTTAGCCCTAACTCTGAAGCTCA-----------------------GGCTGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283420 37 - 90373283 GTGCAGCGTTAGCCCTAACTCTGAAGCTCA-----------------------GGCTGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87943 37 - 179258 GTGCCGCGTTAGCCCTAACTCTGAAGCTCA-----------------------GGCTGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573769 37 - 5823884 GTGCAGCGTTAGCCCTAACCCTGAAGCTCA-----------------------GGCTGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54864 37 + 372756 GTGCAGCATTAGCCCTAACTGTGAAGCTAA-----------------------GGCTGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16290978 37 + 16356641 GTGCAGCGTTAGCCGTAACTGTGGAGCTAA-----------------------GGCTGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160307 36 + 1231380 GTGCAGCGTTAGCCCTAGCTGTGAA-CGGA-----------------------GGCTGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692610 37 + 11732439 GTGTGGCGTTAGCCCTAACCGTGAAGCTAA-----------------------GGCTGCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1866893 35 - 2029793 CCACAGGGTCAGCCCAAACCACGAAGCCCA-----------------------GG--GCC i proCoq1.NW_012150197v1 C 0 I 2 s otoGar3.GL873542 22854432 34 + 22939663 CTGCAGGGTCATCCCAAGCCCC-ATGCTTG-----------------------GG--TCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801163 60 + 182113224 ATGTAGGGTTATCCCAAAGATTAAAGTTTAGAGTTTTGTGGTATAAGGTGAGGGGCAGTC i mm10.chr2 C 0 I 18 s canFam3.chr24 47614853 16 + 47698779 GCACAGCGC--------------------------------------------AGCTGTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 250633 17 - 397369 -----------ACCCCAACC---ACGCCCA-----------------------G------ i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56872619 36 + 57149010 I a score=397134.000000 s hg38.chr20_KI270870v1_alt 119980 28 + 183433 TCTGTGGTGTTTGGGT----GGTGTCTATGGG s panTro5.chr20 66446191 28 + 66533130 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121337 28 + 62195757 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510513 28 - 578057 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032592 28 - 110113093 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92763200 28 - 92844088 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430569 28 + 96509753 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901891 28 - 16982598 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704148 28 - 3785965 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283457 18 - 90373283 TCTGTGGTGTTTGGGT----GG---------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 87980 28 - 179258 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573806 28 - 5823884 TCTGTGGTGTTTGGGT----GGTGTCTATGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54901 28 + 372756 TCTGTGGTGTTTGGGT----GGTATCTGTGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291015 28 + 16356641 TCTGTGGTGTGTGGGT----GGTGTCTGTGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160343 28 + 1231380 TCGGTAGTGTGTGGGC----GGTGTCTGTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692647 28 + 11732439 TCTGTGGTGTTTGGGT----GGTGTCTGTGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56872655 28 + 57149010 TCTGTGGTGTCTGGGT----GGTGTCCACGGG i micMur3.chr18 I 36 C 0 s proCoq1.NW_012150197v1 1866930 26 - 2029793 TCTGTG--GTCCGGGT----GGTGTCTATGGG i proCoq1.NW_012150197v1 I 2 C 0 s otoGar3.GL873542 22854466 26 + 22939663 TCTGTGGTGT-TGGGT----GGTGTCTGT-GG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801241 32 + 182113224 tttttggtttttggtttttgggtttttttggg i mm10.chr2 I 18 I 173 s canFam3.chr24 47614869 25 + 47698779 CCTGGG---CTCGGCG----GATGTTCACGCG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 250650 28 - 397369 ACTGTGGTGCTTGGGC----AGCGTCCTCAGG i dasNov3.JH569290 C 0 C 0 a score=260437.000000 s hg38.chr20_KI270870v1_alt 120008 22 + 183433 GAGGCGTGGCCTGCCCAGGGCC s panTro5.chr20 66446219 22 + 66533130 GAGGCGTGGCCTGCCCAGGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121365 22 + 62195757 GAGGCGTGGCCTGCCCAGGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510541 22 - 578057 GAGGCGTGGCCTGCCCAGGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032620 22 - 110113093 GAGGTGTGGCCTGCCCAGGGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92763228 22 - 92844088 GAGGCGTGGCCTGCCCAGGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430597 22 + 96509753 GAGGCGTGGCCTGCCCAGGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901919 22 - 16982598 GAGGCGTGGCCTGCCCAGGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704176 22 - 3785965 GAGGTGTGGCCTGCCCAGGGCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 88008 22 - 179258 GAGGCGTGGCCTGCCCAGGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573834 22 - 5823884 GAGGCGTGGCCTGCCCAGGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54929 21 + 372756 -AGGCGTGGCCTGCCCTGGGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291043 21 + 16356641 -AGGCGTGGCCTGCCCCAGGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160371 19 + 1231380 --GGCGTGGCCTGCCCC-GGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692675 20 + 11732439 -AGGTGTGGCC-GCCCCGGGCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56872683 22 + 57149010 GAGGGGCAGCTTGCCCGGGGCC i micMur3.chr18 C 0 I 259 s proCoq1.NW_012150197v1 1866956 22 - 2029793 GAGGGGTGGCTTGCCCAGGGCC i proCoq1.NW_012150197v1 C 0 I 420 s otoGar3.GL873542 22854492 21 + 22939663 GAATAGCAGCCCACCCAGGGC- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47614894 21 + 47698779 GACACGTGGTC-ACTCAGGGTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 250678 21 - 397369 GAGGAGTGGACT-CCCTGGCCC i dasNov3.JH569290 C 0 C 0 e chlSab2.chr2 90283475 0 - 90373283 C e mm10.chr2 181801273 173 + 182113224 I a score=929430.000000 s hg38.chr20_KI270870v1_alt 120030 118 + 183433 ATAACCTTCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCT----------TTCCCCCACAAACTCCCTCAGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT s panTro5.chr20 66446241 118 + 66533130 ATAACCGTCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCT----------TTCCCCCACAAACTCCCTCAGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121387 118 + 62195757 ATAACCGTCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCT----------TTCCCCCACAAACTCCCTCAGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510563 118 - 578057 ATAACCTTCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCT----------TTCCCCCACAAACTCCCTCAGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032642 118 - 110113093 ATAACCTGCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCT----------TTCCCCCACAAACTCCCTCAGCCCAAACT---TGAGCCCTTTGAGGCTGGCGCCCTGCAACCAGCCCATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92763250 118 - 92844088 ATAACCTGCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCC----------TCCCCCCACAAACGGCCTTGGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430619 118 + 96509753 ATAACCTGCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCC----------TCCCCCCACAAACGGCCTTGGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16901941 118 - 16982598 ATAACCTGCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCC----------TCCCCCCACAAACGGCCTTAGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704198 118 - 3785965 ATAACCTGCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCACC----------TTCCCCCACAAACGGCCTTAGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283475 117 - 90373283 -TAACCTGCCCCTTTGGTTTGTTCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCC----------TCCCCCCACAAACGGCCTTAGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 88030 118 - 179258 ATAACCTGCCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCC----------TCCCCCCACAAATGGCCTTAGCCCAAACT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGCCCATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573856 118 - 5823884 ATAACCTGCCCCTTTGGTTTGTTCAGA-------TGCTCATCC------TTACATCTCC--------------------------------------------CCGCC----------TCCCCCTACAAACTGCCTCAGCCCAACCT---TGAGCCCTTTGAGGCTGGGGCCCTGCAACCAGTCCATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 54950 120 + 372756 ATAACCTGTCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTATGTCTTCCACCCAC---------------------------------ATACCCCCT----------GCTGCCCACAAACTGCCTCAGCTCAAACT---TGAGCCCTCTGAGGCTGGGGCCCTGCAAC--------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291064 87 + 16356641 GTAACCTGTCCCTTTGGTTTGTCCAGA-------TGCTCA----------------------------------------------------------------------------------CCCACAAACGGCCCCAGCCCAAACT---TGAGCCCTCCGAGGCTGGGGCCCTACAAC--------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160390 121 + 1231380 GTAACCTGTCCCTTTGGTTTGTCCAGA-------TGCTCACCC------TTACGTCTCCCACCCAC--------------------------------AACACCCCCT----------GCTGCCCACAAACCGCCTCAGCCCAAACT---TGAGCCCTCTGAGGCTGGGGCCCTACAAC--------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692695 104 + 11732439 ATAACCTGTCCCTTTGGTTTGTCCAGA-------TGCTCATCC------TTATGTCCCC--CCCAC--------------------------------AACACCCCCT----------GCTGCCCA---------------CAAACT---TGAGCCCTCTGAGGCTGGGGCCCTGCAAC--------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22854513 167 + 22939663 ----CTTGTCCCTTTGGTTGGTGtagaccaatggttctcgacctgtgggttgcgacccctttttaacaatgaaaatatatcgaggtgttaggaaggttgagaaccactggtctaGATGCTCACCTTCAGACTCCCCACCCCCAAACTGCCTATGCCTGGTGAGGCTGGGGC----------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47614915 76 + 47698779 -------------------------------------------------------CTGT--------------------------------------------CCCCT----------TGCACTGGCACAGTCCAGATGCCCAAGCT---TGAGGCCTACCAGGCGGGGGACATGGTGTGTGTCCAGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 250699 75 - 397369 ----------------------------------TGCCCGCCT------T-----------------------------------------------------TCGC-----------TACCCCAACAG-----CTAAGCCCCACCT---TGAGAGCTGCG-GCCTGGGAACCCACCCCAGGCCCAGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1866978 420 - 2029793 I e mm10.chr2 181801273 173 + 182113224 I e micMur3.chr18 56872705 259 + 57149010 I a score=780898.000000 s hg38.chr20_KI270870v1_alt 120148 137 + 183433 TGTCTACCTAGAGAC-GCCAGTCCGGGTCAGAGC------------C-----------C-------ACAGTA----A----------CAGATCGATGGGA-----------GGGGGAC-----AGGCTAGTGCCATCCAAGCTGGGAAGGGAGAGGTCTTCTT-GCAGCAACC-TCTGTGCCCTGAAAGCTTAGGAAGCA--- s panTro5.chr20 66446359 137 + 66533130 TGTCTACCTAGAGAC-GCCAGTCCGGGTCAGAGC------------C-----------C-------ACAGTA----A----------CAGATCGATGGGA-----------GGGGGAC-----AGGCTAGTGCCATCCAAGCTGGGAATGGAGAGGTCTTCTT-GCAGCAACC-TCTGTGCCCTGAAAGCTTAGGAAGCA--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121505 137 + 62195757 TGTCTACCTAGAGAC-GCCAGTCCGGGTCAGAGC------------C-----------C-------ACAGTA----A----------CAGATCGATGGGA-----------GGGGGAC-----AGGCTAGTGCCATCCAAGCTGGGAATGGAGAGGTCTTCTT-GCAGCAACC-TCTGTGCCCTGAAAGCTTAGGAAGCA--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510681 137 - 578057 TGTCTACCTAGAGAC-GCCAGTCCGGGTCAGAGC------------C-----------C-------ACAGTA----A----------CAGATCGATGGGA-----------GGGGGAC-----AGGCTAGTGCCAGCCAAGCTGGGAAGGGAGAGGTCTTCTT-GCAGCAACC-TCTGTGCCCTGAAAGCTTAGGAAGCA--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032760 83 - 110113093 TGTCTAGCTAGAGAC-GCCAGTCCGGGTCAGAGC------------C-----------C-------ACAGTC----A----------CGGATGGATGGGA------------GGGGAC-----AGGCTAGTGTCA-------------------------------------------------------TTAGGAAGCA--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92763368 136 - 92844088 TGTCTACCTAGAGAC-GCCAGTCGGGGTCAGAGC------------C-----------C-------ACAGTC----A----------CAGATCGATGGGA------------GGGGAC-----AGGCCAGTGCCAGCCACGCTGGGAAGGGAGAAATGGTCTT-GCAGCAACC-TCTGTGCTCCGAAGGCCCTTAAAGAA--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430737 136 + 96509753 TGTCTACCTAGAGAC-GCCAGTCGGGGTCAGAGC------------C-----------C-------ACAGTC----A----------CAGATTGATGGGA------------GGGGAC-----AGGCCAGTGCCAGCCACGCTGGGAAGGGAGAGGGCGTCTT-GCAGCAACC-TCTGTGCTCCGAAGGCTTGGGAAGCA--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902059 136 - 16982598 TGTCTACCTAGAGAC-GCCAGTCGGGGTCAGAGC------------C-----------C-------ACAGTC----A----------CAGATCGATGGGA------------GGGGAC-----AGGCCAGTGCCGGCCACGCTGGGAAGGGAGAGATCTTCTT-GCAGCAACC-TCTGTGCTCCGAAGGCTTGGGAAGCA--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704316 136 - 3785965 TGTCTATCTAGAGAC-GCCAGTCGGGGTCAGAGC------------C-----------C-------ACAGTC----A----------CAGATCGATGGGA------------GGGGAC-----AGGCCAGTGCCAGCCACGCTGGGAAGGGAGAGGTCTTCTT-GCAGCAACC-TCTGTGCTCCGAAGGCTTGGGAAGCA--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283592 135 - 90373283 TGTCTACCTAGAGAC-GCCAGTCGGGGTCAGAGC------------C-----------C-------A-AGTC----A----------CAGATCGATGGGA------------GGGGAC-----AGGCCAGTGCCAGCCACGCTGGGAAGGGAGAGGTCTTCTT-GCAGCAACC-TCTGTGCTCCAAAGGCTTGGGAAGCA--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 88148 136 - 179258 TGTCTACCTGGAGAC-GCCAGTCGGGGTCAGAGC------------C-----------C-------ACAGTC----A----------CAGATCGATGGGA------------GGGGAC-----AGGCCAGTGCCAGCCACGCTGGGAAGGGAGAGGTCTTCTT-GCAGCAACC-TCTGTGCTCCGAAGGCTTGGGAAGCA--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5573974 133 - 5823884 TGTCTACCTAGAGAC-GCCAGTCGGGGTCAGAGC------------C-----------C-------ACAGTC----A----------CAGATCCATGGGA------------GGGGAC-----AGGCAAGTGCCAG-CACGCTGGGAAGAGAGAGGTCT--TT-GCAGCAACC-TCTGTGCTCCGAAGGCTTGGGAAGCA--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55070 104 + 372756 ----------------------CTGGGT------------------------------C-------ACAGTT----C----------CAGATCGATGGGA------------GGGGAC-----AGGCTAGTGCCAGCTAAGTGGGGAAGGTAGAG---TTCTT-GCAGCAACC-TCTGTGCTCTGAAAGCTTA-GAAGCA--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291151 102 + 16356641 ----------------------CTGGGT------------------------------C-------ACAGTC----C----------CAGATTGATGGGA------------GGGGAC------GGCTCGTTCCA-CTAAGTGGGGAAGGCAGAG---TTCTT-GCAGCAACC-TCTGTGCTCTGAAAGCTTG-GAAGCA--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160511 104 + 1231380 ----------------------CTGGGT------------------------------C-------ACAGTC----C----------CAGATCGAGGGGA------------GGGGAC-----AGGCTGGTGTCAGCCACCTGGGGAAGGTGGAG---TTCTT-GCAGCAACC-TCTGTGCTCTGAAAGCTTA-GACGCA--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692799 92 + 11732439 ----------------------CCGGGT------------------------------C-------ACAGTC----C----------CAGATCGATGGGA-------------GGGAC-----AGGCTAG-----------TGGGGAAGGTAGAG---TTCTT-GCAGCAGCC-TCTGTGCTCTGAAAGCTTA-GAAGCA--- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22854680 118 + 22939663 ----AACCTGGAGACAGCCAGTGTGGGGCAGAGC------------C-----------CCTGGAAGACTGCCGTAGA----------CAGTTCGAGGAGA------------GGGGAC-----AGGCTAGTGTCAACCAAGCTGGAAAG----------------------------GTGTTCTGAAAGCTCAGAAAGCA--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801446 121 + 182113224 TGTCCACCTATAGAT-ACCAGCCTAAGTCAAA--------------------------T-------ACAAAC---------------------TGTGGGA------------ATGGA-------AGTCTGTATTCACTGAACTGGACAGGTGGAGGCCGTGAC-AGAGTTGCC-TCTTTGTTTGAAAAGCT---GAAGAT--- i mm10.chr2 I 173 I 2 s canFam3.chr24 47614991 126 + 47698779 TACGCACCCTGAGAC-AGCAGCCCACGCCGGGACCCAGGAGGCCTGC-----------C-------ACACAC----G----------CAGGCTCACAGAG------------GGGGA-------GGTCGGGGTCGG-CAGGCTGGGGAG-----------------ACCAGCCATCGGAGCCCTCAAGGCCGCGAG------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 250774 172 - 397369 TGTC-ACCTTGAGAT-GC----TTGGGCCACAGC------------CACGGAGACTGTC-------ACGGAC----ACCAGAATGACCAGAGTTAGGGGAAATGGGTGTAGAGGGGACTGCGGGGGATGGGGAGAGGGCAGAAGGAGAGGAAAAGGACAGCGCAGCAGCTAAC-TCCA-GCCGTGAAAGCCTCAGAGGAGAAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1866978 420 - 2029793 I e micMur3.chr18 56872705 259 + 57149010 I a score=613509.000000 s hg38.chr20_KI270870v1_alt 120285 44 + 183433 AATACTTGTTCTTATGTTTAGGCTAGAAGCAGTAATTGTGAAAA s panTro5.chr20 66446496 44 + 66533130 AATACTTGTTCTTATGTTTAGGCTAGAAGCAGTAATTGTGAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121642 44 + 62195757 AATACTTGTTCTTATGTTTAGGCTAGAAGCAGTAATTGTGAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510818 44 - 578057 AATACTTGTTCTTATGTTTAGGCTAGAAGCAGTAATCGTGAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032843 44 - 110113093 AATACGTGTTCTTATGTTTAGGCTAGAAGCAGTAATTGCGAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92763504 42 - 92844088 A--ACTTCTTCTAATTTTTAGGCTAGAAGCAGTAATTGTGAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430873 44 + 96509753 AATACTTCTTCTAATTTTTAGGCTAGAAGCAGTAATTGTGAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902195 44 - 16982598 AATACTTCTTCTAATTTTTAGGCTAGAAGCAGTAATTGTGAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704452 44 - 3785965 AATACTTCTTCTAATTTTTAGGCTAGAAGCAGTAATTGTGAAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283727 41 - 90373283 AATA---CTTCTAATTTTTAGGCTAGAAGCAGTAATTGTGAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 88284 44 - 179258 AATACTTCTTCTAATTTTTAGGCTAGAAGCAGTAATTGTGAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574107 44 - 5823884 AATACTTCTTCCAATTTTTAGGCTAGAAGCAGCAATTGTGAAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55174 44 + 372756 ATTACTTGTTCTTAGTTTTAGGCTAGAAGCAGTAATTGTGAAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291253 44 + 16356641 AATACTTGTTCTTAGTTTTAGGCTAGAAGCAGTAATTGTGAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160615 44 + 1231380 AACACTTGTTCTTAGTTTTAGGCTAGAAGCAGTAATTGTGAAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692891 44 + 11732439 AATACTTGTTCTTAGTTTTAGGCTAGAAGCGGTAATTGTGAAAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56872964 44 + 57149010 AATGCTTGCTCTTATTTCTAGGCTGGAAGCAGTAATTTTGAAAA i micMur3.chr18 I 259 C 0 s otoGar3.GL873542 22854798 44 + 22939663 AATGCCCATTATTATTTCTAGGCTAGAAGCAGTAATTCTGAAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801569 44 + 182113224 GATGTCTGTTATCATTCTTAGACTAGAGGCAGAAATTATGAAAA i mm10.chr2 I 2 C 0 s canFam3.chr24 47615117 43 + 47698779 GAGACCTGTCCTCACTTCTGGGCTGGAGGCAGTAATTGC-AGCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 250946 44 - 397369 GACACTTGTCTCCACTTTTAGGTCAGAAGCAGTAGTTGTGAAAA i dasNov3.JH569290 C 0 I 2764 e proCoq1.NW_012150197v1 1866978 420 - 2029793 I a score=553668.000000 s hg38.chr20_KI270870v1_alt 120329 47 + 183433 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG s panTro5.chr20 66446540 47 + 66533130 TTAAATTTACAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121686 47 + 62195757 TTAAATTTACAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510862 47 - 578057 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032887 47 - 110113093 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92763546 47 - 92844088 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96430917 47 + 96509753 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902239 47 - 16982598 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704496 47 - 3785965 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283768 47 - 90373283 TTAAATTTAGAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 88328 47 - 179258 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574151 47 - 5823884 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTTAAAGCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55218 28 + 372756 TTAAATT-------------------AATGA---AAGG-TTAAAAGCTGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291297 47 + 16356641 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGGTTTAAAAGCGGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160659 47 + 1231380 TTAAAATTAAAGGAGCAAACCACAG-AATGA---GAGGGTTAAAAGCTGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692935 47 + 11732439 TTAAATTTAAAGGAGCAAACCACAG-AATGA---GAGATTTAAAAGCTGAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56873008 47 + 57149010 TTAAGTTTAGAGGAGTACAACACAG-AACAA---GAAGTTTTAAAGCTGAG i micMur3.chr18 C 0 I 222 s otoGar3.GL873542 22854842 48 + 22939663 TTAAGTTTCAAGGAGTAAGACAGAGTGACAA---GAGGTTTTAAAGCTGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801613 16 + 182113224 TGAAGCTCAGAG---------ACAG-------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47615160 49 + 47698779 CCAACTTCAAAGG-GCGAATCCCGG-GGCAAGCCGAGGGGTTTAAGCTAAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 253754 49 - 397369 TTAAGTTTAGAGGTGCAAAATGCAG-AACAG-CTGGAGTTTTAAAGCTGAG i dasNov3.JH569290 I 2764 C 0 e proCoq1.NW_012150197v1 1866978 420 - 2029793 I a score=430649.000000 s hg38.chr20_KI270870v1_alt 120376 39 + 183433 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG s panTro5.chr20 66446587 39 + 66533130 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121733 39 + 62195757 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510909 39 - 578057 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032934 39 - 110113093 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92763593 39 - 92844088 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG i rheMac8.chr10 C 0 I 1020 s macFas5.chr10 96430964 37 + 96509753 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGT-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902286 39 - 16982598 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704543 39 - 3785965 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283815 39 - 90373283 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 88375 39 - 179258 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574198 37 - 5823884 TCTGGTTTCTGCCGCAGGAGGGAGGGACCACA----GTGGT-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55246 38 + 372756 TCTGGCTTCTGTCACAGGAGGGAGGGAACATA----GTGGTG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291344 38 + 16356641 TCTGGCTTCTGCCACAGGAGGGAGGGAACACA----GTGGTG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160706 37 + 1231380 TCTGGTTTCTGCCACAGGTGGGAGGGAACATA----GTGGT-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2692982 38 + 11732439 TCTGGTTTCTGCCACAGGAGGGAGGGAGCACA----GTGGTG- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22854890 36 + 22939663 TTTAGTTTCTGCCACAGCAGGGAGGGACCATG----CTGG--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801629 30 + 182113224 TCTAGTTTCTTCTGTGGGAGGCAGGGTCCA------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47615209 32 + 47698779 -TTGGCTTCTGCC-CGGGAGGCAGGG-CTGCG----GTG---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 253803 38 - 397369 -TTGGGCTCTGTCG--GGGGTCAGGAGTCACACAGGGTGGG-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1866978 420 - 2029793 I e micMur3.chr18 56873055 222 + 57149010 I a score=4245.000000 s hg38.chr20_KI270870v1_alt 120415 3 + 183433 -TGG s panTro5.chr20 66446626 3 + 66533130 -TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121772 3 + 62195757 -TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510948 3 - 578057 -TGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032973 2 - 110113093 -TG- i nomLeu3.chr13 C 0 C 0 s macNem1.NW_012014244v1 16902325 3 - 16982598 -TGG i macNem1.NW_012014244v1 C 0 I 115 s cerAty1.NW_012001373v1 3704582 3 - 3785965 -TGG i cerAty1.NW_012001373v1 C 0 I 240 s chlSab2.chr2 90283854 3 - 90373283 -TGG i chlSab2.chr2 C 0 I 81 s manLeu1.NW_012101652v1 88414 3 - 179258 -TGG i manLeu1.NW_012101652v1 C 0 I 8855 s dasNov3.JH569290 253841 3 - 397369 GTG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1866978 420 - 2029793 I e canFam3.chr24 47615241 0 + 47698779 C e colAng1.NW_012114444v1 5574235 0 - 5823884 C e mm10.chr2 181801659 0 + 182113224 C e micMur3.chr18 56873055 222 + 57149010 I e saiBol1.JH378156 16291382 0 + 16356641 C e cebCap1.NW_016107870v1 1160743 0 + 1231380 C e calJac3.chrUn_GL286459 55284 0 + 372756 C e aotNan1.NW_018500483v1 2693020 0 + 11732439 C e rheMac8.chr10 92763632 1020 - 92844088 I e otoGar3.GL873542 22854926 0 + 22939663 C e macFas5.chr10 96431001 0 + 96509753 C a score=6796.000000 s hg38.chr20_KI270870v1_alt 120418 4 + 183433 CGGT s panTro5.chr20 66446629 4 + 66533130 CGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121775 4 + 62195757 CGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510951 4 - 578057 CGGT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96431001 3 + 96509753 -GGT i macFas5.chr10 C 0 I 303 s chlSab2.chr2 90283938 4 - 90373283 TGGT i chlSab2.chr2 I 81 I 2 s colAng1.NW_012114444v1 5574235 3 - 5823884 -GGT i colAng1.NW_012114444v1 C 0 C 0 s dasNov3.JH569290 253844 4 - 397369 TGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1866978 420 - 2029793 I e canFam3.chr24 47615241 0 + 47698779 C e cerAty1.NW_012001373v1 3704585 240 - 3785965 I e mm10.chr2 181801659 0 + 182113224 C e micMur3.chr18 56873055 222 + 57149010 I e manLeu1.NW_012101652v1 88417 8855 - 179258 I e saiBol1.JH378156 16291382 0 + 16356641 C e macNem1.NW_012014244v1 16902328 115 - 16982598 I e cebCap1.NW_016107870v1 1160743 0 + 1231380 C e calJac3.chrUn_GL286459 55284 0 + 372756 C e aotNan1.NW_018500483v1 2693020 0 + 11732439 C e nomLeu3.chr13 110032975 0 - 110113093 C e rheMac8.chr10 92763632 1020 - 92844088 I e otoGar3.GL873542 22854926 0 + 22939663 C a score=152991.000000 s hg38.chr20_KI270870v1_alt 120422 39 + 183433 GGGGGGCATGCCCTGACCAGGCTGAGGGTGGGGAGTTGT s panTro5.chr20 66446633 39 + 66533130 GGGGGGCATGCCCTGACCAGGCTGAGGGTGGGGAGTTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121779 39 + 62195757 GGGGGGCATGCCCTGACCAGGCTGAGGGTGGGGAGTTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510955 39 - 578057 GGGGGGCACGCCCTGACCAGGCTGAGGGTGGGGAGTTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110032975 39 - 110113093 GGGGGGCACGCCCTGACCAGGCTGAGTGTGGGGAGTTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92764652 39 - 92844088 GGGGGGTGTGCCCTGATCACGCTGAGGGTGGGGGGTTAC i rheMac8.chr10 I 1020 C 0 s macFas5.chr10 96431307 39 + 96509753 GGGGGGTGTGCCCTGATCACACTGAGGGTGGGGGGTTAC i macFas5.chr10 I 303 C 0 s macNem1.NW_012014244v1 16902443 39 - 16982598 GGGGGGTGTGCCCTGATCACGCTGAGGGTGGGGGGTTAC i macNem1.NW_012014244v1 I 115 C 0 s cerAty1.NW_012001373v1 3704825 39 - 3785965 GGGGGGTGTGCCCTGATCACGCTGAGGGTGGGGGGTTAC i cerAty1.NW_012001373v1 I 240 C 0 s chlSab2.chr2 90283944 39 - 90373283 GGGGGGTGTGCCCTGATCACGCTGAGGGTGGGGGGTTAC i chlSab2.chr2 I 2 C 0 s colAng1.NW_012114444v1 5574238 39 - 5823884 GGGGGGCATGCCCTGATCACACTGAGGGTGGGGGGTTAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55284 31 + 372756 -GGGGGCATAACCTGACC-------TGGTGGGGGTGTGC i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16291382 10 + 16356641 -----------------------------GGGGGTGCGC i saiBol1.JH378156 C 0 I 2 s cebCap1.NW_016107870v1 1160743 10 + 1231380 -----------------------------GGGGGTGTGC i cebCap1.NW_016107870v1 C 0 I 2 s aotNan1.NW_018500483v1 2693020 10 + 11732439 -----------------------------TGGGGGGTGC i aotNan1.NW_018500483v1 C 0 I 2 s otoGar3.GL873542 22854926 32 + 22939663 GAGGGGTGTGCTCTAACCAGGCTGAGGGTGGT------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801659 20 + 182113224 AGTGGACATGCTT------GACTGAG------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47615241 27 + 47698779 GGGGGACGTGACTTGGCGGGGCTGAGG------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 253848 22 - 397369 TGGGGGCA-GCCTTGA---------------GGGACTG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1866978 420 - 2029793 I e micMur3.chr18 56873055 222 + 57149010 I e manLeu1.NW_012101652v1 88417 8855 - 179258 I a score=83857.000000 s hg38.chr20_KI270870v1_alt 120461 7 + 183433 GTCTGCA s panTro5.chr20 66446672 7 + 66533130 GTCTGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121818 7 + 62195757 GTCTGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 510994 7 - 578057 GTCTGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033014 7 - 110113093 GTCTGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92764691 7 - 92844088 GTCTGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96431346 7 + 96509753 GTCTGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902482 7 - 16982598 GTCTGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704864 7 - 3785965 GTCTGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283983 7 - 90373283 GTCTGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97272 7 - 179258 GTCTGCA i manLeu1.NW_012101652v1 I 8855 C 0 s colAng1.NW_012114444v1 5574277 7 - 5823884 GTCTGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55317 7 + 372756 GTCTGCA i calJac3.chrUn_GL286459 I 2 C 0 s saiBol1.JH378156 16291394 7 + 16356641 GTCTGCA i saiBol1.JH378156 I 2 C 0 s cebCap1.NW_016107870v1 1160755 7 + 1231380 GTCTGCA i cebCap1.NW_016107870v1 I 2 C 0 s aotNan1.NW_018500483v1 2693032 7 + 11732439 GTCTGCA i aotNan1.NW_018500483v1 I 2 C 0 s otoGar3.GL873542 22854958 7 + 22939663 GTGGGCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801679 4 + 182113224 ---TTCA i mm10.chr2 C 0 I 3 s dasNov3.JH569290 253870 1 - 397369 ------A i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1866978 420 - 2029793 I e canFam3.chr24 47615268 0 + 47698779 C e micMur3.chr18 56873055 222 + 57149010 I a score=340477.000000 s hg38.chr20_KI270870v1_alt 120468 26 + 183433 GGCTCTTGGGGGCTGGAGCTGCCCTG s panTro5.chr20 66446679 26 + 66533130 GGCTCTTGGGGGCTGGAGCTGCCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121825 26 + 62195757 GGCTCTTGGGGGCTGGAGCTGCCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511001 26 - 578057 GGCTCTTGGGGGCTGGAGCTGCCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033021 26 - 110113093 GGCTCTTGGGGGCTGGAGCTGCCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92764698 26 - 92844088 GGCTCTTGGGGGCTGGAGCTGCCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96431353 26 + 96509753 GGCTCTTGGGGGCTGGAGCTGCCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902489 26 - 16982598 GGCTCTTGGGGGCTGGAGCTGCCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704871 26 - 3785965 GGCTCTTGGGGGCTGGAGCTGCCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90283990 26 - 90373283 GGCTCTTGGGGGCTGGAGCTGCCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97279 26 - 179258 GGCTCTTGGGGGCTGGAGCTGCCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574284 26 - 5823884 GGCTCTGGGGGGCTGGAGCTGACCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55324 26 + 372756 GGCTCTTGGGGGCTGGAGCTGCCCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291401 26 + 16356641 GGCTCTTGGGGGCTGGAGCTGCCCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160762 26 + 1231380 GGCTCTTGGGGGCTGAGGGTGCCCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693039 26 + 11732439 GGCTCTTGGGGGCTGGAGCTGCCCTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1867398 26 - 2029793 GGCTCCTGGGGGCTGGAGCTGCCCTG i proCoq1.NW_012150197v1 I 420 I 136 s otoGar3.GL873542 22854965 20 + 22939663 ------TCTGCCCTGGATCTCTGCTC i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181801686 16 + 182113224 GGCTCTGAG----------TGCCATG i mm10.chr2 I 3 C 0 s canFam3.chr24 47615268 4 + 47698779 ----------------------CCTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 253871 23 - 397369 GGCTCTTGG-GGCTGGGGCTGCCC-- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56873055 222 + 57149010 I a score=1133676.000000 s hg38.chr20_KI270870v1_alt 120494 132 + 183433 CGTT-------------GCTGTGTCCCCCACCTGCCTACCAAGCAGCAGCCTTTGGACAAGGCTC--CTGCACCCTCCTCAGCCTGTG--CTCC-------CCACAC----AG-----CTGGCGCTCCCCAGATTCTCTGACAGCCTCGGCTCCCTCCACCCCCT s panTro5.chr20 66446705 132 + 66533130 CGTT-------------GCTGTGTCCCCCACCTGCCTACCAAGCAGCAGCCTTTGGACAAGGCTC--CTGCACCCTCCTCAGCCTGTG--CTCC-------CCACAC----AG-----CTGGTGCTCCCCAGATTCTCTGACAGCCTCGGCTCCCTCCACCCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121851 132 + 62195757 CGTT-------------GCTGTGTCCCCCACCTGCCTACCAAGCAGCAGCCTTTGGACAAGGCTC--CTGCACCCTCCTCAGCCTGTG--CTCC-------CCACAC----AG-----CTGGTGCTCCCCAGATTCTCTGACAGCCTCGGCTCCCTCCACCCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511027 132 - 578057 CATT-------------GCTGTGTCCCCCACCTGCCTACCAAGCAGCAGCCTTTGGACAAGGCTC--CTGCACCCTCCTCAGCCTGTG--CTCC-------CCACAC----AG-----CTGGTGCTCCCCAGATTCTCTGACAGCCTCGGCTCCCTCCACCCCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033047 132 - 110113093 CGTT-------------GCTGTGTCCCCCACCCGCCCACCAAGTAGCAGCCTTTGGACAGGGCTC--CTGTACCCTCCACAGCCTGTG--CTCC-------CCACAC----AG-----CTGGTGCTCCCCAGATTCTCTGACAACCTTGGCTCCCTCCACCCCCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92764724 144 - 92844088 CGTTGCTGCCCTAAATTGCTGTGTCCCCCAACCGCCCAGCAAGCAGCAGCCTTGGGACAGGGCTC--CTGCCTCCTCCTCAGCCTGTG--CTCC-------CCACTC----AG-----CTGGTGCTCCCCAGATTCTCTGACAGCCTTGGCT-CCTCCGTTCCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96431379 144 + 96509753 CGTTGCTGCCCTAAATTGCTGTGTCCCCCAACCGCCCAGCAAGCAGCAGCCTTGGGACAGGGCTC--CTGCCTCCTCCTCAGCCTGTG--CTCC-------CCACTC----AG-----CTGGTGCTCCCCAGATTCTCTGACAGCCTTGGCT-CCTCCGTCCCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902515 144 - 16982598 CGTTGCTGCCCTAAATCGCTGTGTCCCCCAACCGCCCAGCAAGCAGCAGCCTTGGGACAGGGCTC--CTGCCTCCTCCTCAGCCTGTG--CTCC-------CCACTC----GG-----CTGGTGCTCCCCAGACTCTCTGACAGCCTTGGCT-CCTCCATCCCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3704897 145 - 3785965 CGTTGCTGCCCTAAATTGCTGTGTCCCCCAACCGCCCAGCAAGCAGCAGCCTTGGGACAGGGCTC--CTGCCTCCTCCTCAGCCTGTG--CTCC-------CCACTC----AG-----CTGGTGCTCCCCAGATTCTCTGACAGCCTTGGCTCCCTCCATCCCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90284016 145 - 90373283 CGTTGCTGCCCTAATTTGCTGTGTCCCCCAGCCGCACAGCAAGCAGCAGCCTTTGGACAGGGCTC--CTGCCTCCTCCTCAGCCTGTG--CTCC-------CCACTC----AG-----CTGGTGCTCCCCAGATTCTCTGACAGCCTTGGCTCCCTCCATCCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97305 145 - 179258 CGTTGCTGCCCTAAATTGCTGTGTCCCCCAACCGCCCAGCAAGCAGCAGCCTTGGGACAGGGCTC--CTGCCTCCTCCTCAGCCTGTG--CTCC-------CCACTC----AG-----CTGGTGCTCCCCAGATTCTCTGACAGCCTTGGCTCCCTCCATCCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574310 145 - 5823884 CGTTGCTGCCCTAAATTGCTGTGTCCCCCAACTGCCCACCAAGCAGCAGCCTTTGGACAGGGCTC--CTGCCTCCTCCTCAGCCTGTG--CTCC-------CCACTC----AG-----CTGGTGTTCCCCAGATTCTCTGACAGCCTTGGCTCCCTCCATCCCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55350 149 + 372756 TGTTGCTGCCCTAAGTTGCTGTGTTCCCCAACTGCCTACCAAGCAGCAGCCTTTGGACAGGGCTC--CTGCATCCTTCTCGGCTCAAGGTCCCC-------CCACACAC--AG-----CTGGTGCTCCCCAGATTCTCTGACAACTTTGGCTCCCTCCACCCCCG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291427 146 + 16356641 CGTTGCTGCCCTAAACTGCCGTGTTCCCCAACTGCCTACCAAGCAGCAACCTTTGGACAGGGCTC--CTGCGTCCTTCTCGGCCCAAG--CTCC-------CCACACAC--AG-----CGGGTGCTCCCCAGATTCTCTGACAGCCTTGGCTCCCTCCA-CCCCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160788 145 + 1231380 CGTTGCTGCCCTAAATTGCTGTGTTCCCCAACTGCCTACCAAGCAGCAGCC-TTGGACAGGGCTC--CTGCGTCCTTCTCGGCCCAAG--CTCC-------CCTCACAC--AG-----CTGGTGCTCCCCAGATTCTCTGACAACCTCGGCTCTCTCCA-CCCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693065 147 + 11732439 TGTTGCTGCCCTAAATTGCTGTGTTCCCCAACTGCCTACTGAGCAGCAGCCTTTAAACAGGGCTC--CTGCGTCCTTCTCGGCCCAAG--CTCC-------ACACACGCAGAG-----CTGGTGCTCCCCAGATTCTCTGACAACCTTGGCTCCCTCC--CCCCG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22854987 103 + 22939663 -------------AGTTGCCATGTCCCTCAGTTCCCTACAAAGCAGC--CCCTTGAACAGGGCTC--CTTCTGTCTCTGTGGGCTGCC--CTCC-------CCATGC----AGACACACCTGTGCTCTCC-------CTG------------------------- i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181801702 101 + 182113224 ---------------------------CACTCTGCTTACACAGCTGCAGCCTTTGTACAGGACTC--CCA-ACCTTCCTTGGGCCATT--CTCCATTGTAGCCATGC-----------CTGGT--------------CTCATTACTTGTTCTCTCTGC------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47615272 29 + 47698779 ---------------CGGCTGTGCTCACC-------------------------------------------------------------GTCA-------CCGTCC----CG-----CTG-------------------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 253894 78 - 397369 ----------------------------------------------------CCAGGCCGGGCCCAGCTGC-TCCTGCTCCAGCTGTG--CTGC-------CC--------GG-----CCCGCTCTGCCTGCACTC-------ACCATGGCCCCGTCCCC----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1867424 136 - 2029793 I e micMur3.chr18 56873055 222 + 57149010 I a score=2140162.000000 s hg38.chr20_KI270870v1_alt 120626 106 + 183433 GTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCTGGCTGCACAGGCCAGGGTCACGTGAACAGCAACCGCAACACGCACAGAAGGTA s panTro5.chr20 66446837 106 + 66533130 GTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCTGGCTGCACAGGCCAGGGTCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62121983 106 + 62195757 GTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCTGGCTGCACAGGCCAGGGTCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511159 106 - 578057 GTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCTGGCTGCACAGGCCAGGGTCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033179 106 - 110113093 GTTTTCTTACAGTCTTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCTGGCTGCACAGGCCAGGGTCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92764868 106 - 92844088 GTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGTTGAAGTGCCCCACGCCCGGCTGCACAGGCCAGGGCCACGTGAACAGCAACCGCAACACACACAGAAGGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96431523 106 + 96509753 CTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGTTGAAGTGCCCCACGCCCGGCTGCACAGGCCAGGGCCACGTGAACAGCAACCGCAACACACACAGAAGGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902659 106 - 16982598 GTTCTCTTACAGTCTTGGCCATGCACGAGAACGTGCTGAAGTGCCCCACGCCCGGCTGCACAGGCCAGGGCCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3705042 106 - 3785965 GTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGCTAAAGTGCCCCACTCCCGGCTGCACAGGCCAGGGCCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90284161 106 - 90373283 GTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCCGGCTGCACAGGCCAGGGCCATGTGAACAGCAACCGCAACACGCACAGAAGGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97450 106 - 179258 GTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGCTAAAGTGCCCCACTCCCGGCTGCACAGGCCAGGGCCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574455 106 - 5823884 GTTCTCTTACAGTCTTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCCGGCTGCACAGGCCAGGGCCATGTGAACAGCAACCGCAACACGCACAGAAGGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55499 106 + 372756 GTTCTCTTTCAGTCTTAGCCATGCATGAGAACGTGCTGAAGTGCCCTACTCCTGGCTGCACGGGCCAAGGTCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291573 106 + 16356641 GTTCTCTTTCAGTCCTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCCGGCTGCACGGGCCAGGGTCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1160933 106 + 1231380 GTTCTCTTTCAGTCCTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCTGGCTGCACGGGCCAGGGTCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693212 106 + 11732439 GTTCTCTTTCAGTCTTAGCCATGCATGAGAACGTGCTGAAGTGCCCCACTCCTGGCTGCACGGGCCAGGGTCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56873277 106 + 57149010 GTTCTCTTACAGTCTTGGCCATGCATGAGAACGTGCTGAAGTGCCCTACTCCTGGCTGCACGGGCCAGGGCCACGTGAACAGCAACCGCAACACACACAGAAGGTA i micMur3.chr18 I 222 I 572 s proCoq1.NW_012150197v1 1867560 106 - 2029793 GTTCTCTTACAGTCTTGGCCATGCATGAGAACGTGCTGAAGTGCCCTACCCCTGGCTGCACGGGCCAGGGCCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i proCoq1.NW_012150197v1 I 136 C 0 s otoGar3.GL873542 22855090 106 + 22939663 GTTCTCTTACAGTCTTGGCCATGCATGAGAATGTGCTGAAGTGCCCTACTCCTGGCTGCACGGGCCAGGGTCATGTGAACAGCAACCGCAACACACACAGAAGGTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801803 105 + 182113224 -TTCTCTTACAGTCTTGGCCATGCATGAAAATGTACTGAAGTGCCCTACTCCTGGCTGCACGGGCCAAGGCCATGTGAACAGCAACCGCAATACTCACAGAAGGTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47615301 106 + 47698779 GTTCTCTTCCAGTCTTGGCCATGCACGAGAACGTGCTGAAGTGCCCTACTCCGGGCTGTACGGGCCAAGGCCACGTGAACAGCAACCGCAACACGCACAGAAGGTA i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 253972 105 - 397369 -TTCTTTTGCAGTCTTGGCCATGCATGAAAATGTGCTCAAGTGCCCCACGCCTGGCTGCACGGGGCAGGGCCACGTGAACAGCAACCGTAACACGCACCGAAGGTA i dasNov3.JH569290 C 0 C 0 a score=226907.000000 s hg38.chr20_KI270870v1_alt 120732 18 + 183433 CTTGGACTGAGCTgg----------gcc- s panTro5.chr20 66446943 18 + 66533130 CTTGGACTGAGCTgg----------gcc- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122089 18 + 62195757 CTTGGACTGAGCTgg----------gcc- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511265 18 - 578057 CTTGGACTGAGCTgg----------gcc- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033285 18 - 110113093 CTTGGACTGAGCTGG----------GCC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92764974 17 - 92844088 -TTGGACTGAACTGG----------GCC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96431629 17 + 96509753 -TTGGACTGAACTGG----------GCC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902765 18 - 16982598 CTTGGACTGACCTGG----------GCC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3705148 18 - 3785965 CTTGGACTGAACTGG----------GCC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90284267 18 - 90373283 CTTGGACTGAACTGG----------GCC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97556 18 - 179258 CTTGGACTGAACTGG----------GCC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574561 18 - 5823884 CTTGGACTGAACTGG----------GCC- i colAng1.NW_012114444v1 C 0 I 4 s calJac3.chrUn_GL286459 55605 18 + 372756 CTTGGACTGAGCTGG----------GCC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291679 18 + 16356641 CTTGGACGGAGCCGG----------GCC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161039 18 + 1231380 CCTGGACTGAGCCGG----------GCC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693318 18 + 11732439 CTTGGACTGAGCCGG----------GCC- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1867666 18 - 2029793 CCGGGGCTGAGCTGA----------GCC- i proCoq1.NW_012150197v1 C 0 I 508 s otoGar3.GL873542 22855196 18 + 22939663 CCAGGGCTAAGCTGA----------GCC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801908 17 + 182113224 -GTGAATTAAGCTGG----------GGC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47615409 16 + 47698779 CTTGGGCGGAGCCGG----------G--- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 254077 24 - 397369 -----GCTGGACGGGTGCCCCACTCGCCT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56873383 572 + 57149010 I a score=368.000000 s hg38.chr20_KI270870v1_alt 120750 2 + 183433 gt s panTro5.chr20 66446961 2 + 66533130 gt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122107 2 + 62195757 gt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511283 2 - 578057 gt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033303 2 - 110113093 AT i nomLeu3.chr13 C 0 C 0 s macNem1.NW_012014244v1 16902783 2 - 16982598 GG i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90284285 2 - 90373283 AG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97574 2 - 179258 AG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 55623 2 + 372756 AC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291697 2 + 16356641 AC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161057 2 + 1231380 AC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693336 2 + 11732439 AC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181801925 2 + 182113224 AT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 254101 2 - 397369 GC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1867684 508 - 2029793 I e canFam3.chr24 47615425 0 + 47698779 C e cerAty1.NW_012001373v1 3705166 0 - 3785965 C e colAng1.NW_012114444v1 5574579 4 - 5823884 I e micMur3.chr18 56873383 572 + 57149010 I e rheMac8.chr10 92764991 0 - 92844088 C e otoGar3.GL873542 22855214 0 + 22939663 C e macFas5.chr10 96431646 0 + 96509753 C a score=737.000000 s hg38.chr20_KI270870v1_alt 120752 7 + 183433 agtgggg s panTro5.chr20 66446963 7 + 66533130 agtgggg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122109 7 + 62195757 agtgggg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511285 7 - 578057 agtgggg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033305 7 - 110113093 AGTTGGG i nomLeu3.chr13 C 0 C 0 s macNem1.NW_012014244v1 16902785 7 - 16982598 GGTGGGG i macNem1.NW_012014244v1 C 0 I 60 s chlSab2.chr2 90284287 7 - 90373283 GGTGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97576 7 - 179258 GGTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 55625 3 + 372756 GGT---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291699 3 + 16356641 AGT---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161059 3 + 1231380 AGT---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693338 3 + 11732439 AGT---- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22855214 2 + 22939663 -AT---- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 254103 7 - 397369 CCTGGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1867684 508 - 2029793 I e canFam3.chr24 47615425 0 + 47698779 C e cerAty1.NW_012001373v1 3705166 0 - 3785965 C e colAng1.NW_012114444v1 5574579 4 - 5823884 I e mm10.chr2 181801927 0 + 182113224 C e micMur3.chr18 56873383 572 + 57149010 I e rheMac8.chr10 92764991 0 - 92844088 C e macFas5.chr10 96431646 0 + 96509753 C a score=-141830.000000 s hg38.chr20_KI270870v1_alt 120759 87 + 183433 gccagggt----gggggccgtgg-----tggggg-----------ccag----------ggtgggggc-cgtgg-----------tgggggccagggtgggggccgtggtgggggccagggtgggggcc s panTro5.chr20 66446970 25 + 66533130 gccagggt----gggggccgtgg-----tggggg----------------------------------------------------------------------------------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122116 25 + 62195757 gccagggt----gggggccgtgg-----tggggg----------------------------------------------------------------------------------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511292 25 - 578057 gccagggt----gggggccgtgg-----tggggg----------------------------------------------------------------------------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033312 25 - 110113093 GCCAGGGT----GGGGGCCGTGG-----TGGCGG----------------------------------------------------------------------------------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92764991 12 - 92844088 ---AGGGT----GGGGGCC-------------------------------------------------------------------------------------------------------------- i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96431646 12 + 96509753 ---AGGGT----GGGGGCC-------------------------------------------------------------------------------------------------------------- i macFas5.chr10 C 0 I 1 s cerAty1.NW_012001373v1 3705166 12 - 3785965 ---AGGGT----GGGGGCC-------------------------------------------------------------------------------------------------------------- i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90284294 3 - 90373283 ----------------GCC-------------------------------------------------------------------------------------------------------------- i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 97583 3 - 179258 ----------------GCC-------------------------------------------------------------------------------------------------------------- i manLeu1.NW_012101652v1 C 0 I 1 s calJac3.chrUn_GL286459 55628 25 + 372756 ----GGGCCATGTGGGGCCTTGG-----TGGGGG----------------------------------------------------------------------------------------------- i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16291702 25 + 16356641 ----GGGCCGTGTGGGGCTGAGG-----TGGGGG----------------------------------------------------------------------------------------------- i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1161062 25 + 1231380 ----GGGCCATGTGGGGCCGTGG-----TGGGGG----------------------------------------------------------------------------------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693341 25 + 11732439 ----GGGCCATGTGGGGCCGTGG-----TGGGGC----------------------------------------------------------------------------------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22855216 13 + 22939663 -----------GGGTGGGCAGAG-----T---------------------------------------------------------------------------------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47615425 71 + 47698779 ---GTGGC----GGGGGCTGTGG-----TGGGCGGGGCCTGGTG-CCAG----------GTCAAGGCCTCCTGG-----------TGGGGGTCAGGACGGTGCCC------------------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 254110 97 - 397369 ---ATGGC----GTGGGATGTGGGGGCATGGGGGCCGAGCAGCACCCAGAGGTGCTATTGCCTGTGCCCTGTGAGCTGGAGACCCCGAGAGACGAGAGGGGGCG------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1867684 508 - 2029793 I e colAng1.NW_012114444v1 5574579 4 - 5823884 I e mm10.chr2 181801927 0 + 182113224 C e micMur3.chr18 56873383 572 + 57149010 I e macNem1.NW_012014244v1 16902792 60 - 16982598 I a score=-360.000000 s hg38.chr20_KI270870v1_alt 120846 2 + 183433 -gt s dasNov3.JH569290 254207 2 - 397369 GG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1867684 508 - 2029793 I e canFam3.chr24 47615496 0 + 47698779 C e cerAty1.NW_012001373v1 3705178 1 - 3785965 I e colAng1.NW_012114444v1 5574579 4 - 5823884 I e chlSab2.chr2 90284297 1 - 90373283 I e mm10.chr2 181801927 0 + 182113224 C e micMur3.chr18 56873383 572 + 57149010 I e panPan2.chr20 62122141 0 + 62195757 C e gorGor5.CYUI01015848v1 511317 0 - 578057 C e manLeu1.NW_012101652v1 97586 1 - 179258 I e saiBol1.JH378156 16291727 1 + 16356641 I e macNem1.NW_012014244v1 16902792 60 - 16982598 I e cebCap1.NW_016107870v1 1161087 0 + 1231380 C e calJac3.chrUn_GL286459 55653 1 + 372756 I e aotNan1.NW_018500483v1 2693366 0 + 11732439 C e panTro5.chr20 66446995 0 + 66533130 C e nomLeu3.chr13 110033337 0 - 110113093 C e rheMac8.chr10 92765003 1 - 92844088 I e otoGar3.GL873542 22855229 0 + 22939663 C e macFas5.chr10 96431658 1 + 96509753 I a score=-9953.000000 s hg38.chr20_KI270870v1_alt 120848 19 + 183433 ---ggtggggg--GCTCCACGTGG------- s panTro5.chr20 66446995 11 + 66533130 -------------GCTCCACGTGT------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122141 11 + 62195757 -------------GCTCCACGTGT------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511317 11 - 578057 -------------GCTCCACGTGT------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033337 11 - 110113093 -------------GCTCCATGGGT------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765004 15 - 92844088 ---GGGGGG------CCCATGTGC------- i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96431659 15 + 96509753 ---GGGGGG------CCCATGTGC------- i macFas5.chr10 I 1 C 0 s cerAty1.NW_012001373v1 3705179 17 - 3785965 ---GGAGGG----GCCCCATGTGT------- i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90284298 17 - 90373283 ---GGGGGG----GCCCCATGTGT------- i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 97587 17 - 179258 ---GGGGGG----GCCCCATGTGT------- i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5574583 17 - 5823884 ---TGGGCG----GCCCCATGTGT------- i colAng1.NW_012114444v1 I 4 C 0 s calJac3.chrUn_GL286459 55654 8 + 372756 ----------------CCATGTGT------- i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16291728 8 + 16356641 ----------------CCATGTGT------- i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1161087 8 + 1231380 ----------------CCATGTGT------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693366 8 + 11732439 ----------------CCCTGTGT------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22855229 4 + 22939663 --------------------GTAC------- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 254209 31 - 397369 GGCGAGGGGAACCGCCTCAGGTCAGTTTCGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1867684 508 - 2029793 I e canFam3.chr24 47615496 0 + 47698779 C e mm10.chr2 181801927 0 + 182113224 C e micMur3.chr18 56873383 572 + 57149010 I e macNem1.NW_012014244v1 16902792 60 - 16982598 I a score=638663.000000 s hg38.chr20_KI270870v1_alt 120867 93 + 183433 GGTAGGGCACCTGGGTTGGGCC-------TG-----TGTGTCCCTGCCTGGGCCGTGAGCCCGTGACCTGGGACGGGGCTCTGGCCTGCCTGG-GGC--T-CCCTGTGT s panTro5.chr20 66447006 93 + 66533130 GGTAGGGCACCTGGGTTGGGCC-------TG-----TGTGTCCCTGCCTGGGCCGTGAGCCCGTGACCTGGGACGGGGCTCTGGCCTGCCTGG-GGC--T-CCCTGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122152 93 + 62195757 GGTAGGGCACCTGGGTTGGGCC-------TG-----TGTGTCCCTGCCTGGGCCGTGAGCCCGTGACCTGGGACGGGGCTCTGGCCTGCCTGG-GGC--T-CCCTGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511328 93 - 578057 GGTAGGGCACCTGGGTTAGGCC-------TG-----TGTGTCCCTGCCTAGGCCTTGGGCCCGTGACCTGGGATGGGGCTCTGGCCTGCCTGG-GGC--T-CCCTGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033348 93 - 110113093 GGTAGGGCACCTGGAGTGGGCC-------TG-----TGTGTCCCTCCCTGGGCCTTGGGCCTGTGACCTGGGACGGGGCTCCGGGCTGCCTGG-GGC--T-CCCTGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765019 80 - 92844088 GGGAGGGCACCTGGGTTAGACC-------TG-----TGTGTCCCAGTCTGGGCCTTGGGCCCGTGACCTGGGACAGGGCTCTGG-----------------CCCTGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96431674 80 + 96509753 GGGAGGGCACCTGGGTTAGACC-------TG-----TGTGTCCCAGTCTGGGCCTTGGGCCCGTGACCTGGGACAGGGCTCTGG-----------------CCCTGTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3705196 80 - 3785965 GGGAGGGCACCTGGGTGAGACC-------TG-----TGTGTCCCAGTCTGGGCCTTGGGCCCGTGACCTGGGACAGGGCTCTGG-----------------CCCTGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90284315 80 - 90373283 GGGAGGGCACCTGGGTTAGGCC-------TG-----TGTGTCCCGGTCTGGGCCTTGGGCCCGTGACCTGGGACAGGGCTCTGG-----------------CCCTGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97604 80 - 179258 GGGAGGGCACCTGGGTGAGACC-------TG-----TGTGTCCCAGTCTGGGCCTTGGGCCCGTGACCTGGGACAGGGCTCTGG-----------------CCCTGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574600 94 - 5823884 GATAGGGCACCTGGGTTAGACC-------TG-----TATGTCCCTGTCTGGGCCTTGGGCCCGTGACCTGGGACAGGGCTCTGGCCTGCCAGG-TAG--CTCCCTGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55662 93 + 372756 GATAGGGCACCTGGGTTGGGCC-------TG-----TGTGTCTCTGCCTGGGCATTGAGCC-ATGACATGGGATTGGGATCTGGCCTGCCAGGTAGC--T-CCCTCTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291736 93 + 16356641 GGTAGGGCGCCTGGGTTGGGCC-------TG-----TGTGTCTCTGCCTGGGCATTGAGCC-ATGATGTGGGATGGGGATCTGGCCTGCCAGGTAGC--T-CCCTGTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161095 92 + 1231380 GGTA-GGCACCCGGGTTGGGCC-------TG-----TGTGTCTCTGCCTGGGCATTGAGCC-ATGACGTGGGATGGGGATCTGGCCTGCCAGGTAGC--T-CCCTGTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693374 93 + 11732439 GGTAGGGCACCTGGGTTGGGCC-------TG-----TGTGTCTCTGCCTGGGCATTGAGCC-ATGATGTGGGATGGGGATCTGGCCTGCCAGGTAGC--T-CCCTGTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22855233 97 + 22939663 AGTGAGGAATCTTGGCTGGGCCCAT--AGTG-----TATGTCCC-GCCCAGGCCTTGGGCC-CTTACCTGGGCCAGGGCTCTGGCCTGCCAGGTGGC--C-CTCTGAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181801927 94 + 182113224 GGTAGGAAATTAGGGCTGGGCC-------TGTAGTATATGTCTCTGCCTGGGCCTTGAGCC-TTTATCTGGAATA-GGTTCTGGACAGACATATAGC--T-CCCTG--- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 254240 85 - 397369 GTTAGGGGACACAGACGGGGCAGCTCAGGTG-----GGTGTGCT------------------GAGGCCAGGTGGAAGCTTCTGGATCACACACTGGCATT-CGCTGTGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1867684 508 - 2029793 I e canFam3.chr24 47615496 0 + 47698779 C e micMur3.chr18 56873383 572 + 57149010 I e macNem1.NW_012014244v1 16902792 60 - 16982598 I a score=550033.000000 s hg38.chr20_KI270870v1_alt 120960 62 + 183433 GC----TACCCTTCTCCCAG--CCTG---CCGCCCTGAGGAGTGGGT------ACAAGGTCAGGGCACACCTGGGCG s panTro5.chr20 66447099 62 + 66533130 GC----TGCCCTTCTCCCAG--CCTG---CCGCCCTGAGGAGTGGGT------ACAAGGTCAGGGCACACCTGGGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122245 62 + 62195757 GC----TGCCCTTCTCCCAG--CCTG---CCGCCCTGAGGAGTGGGT------ACAAGGTCAGGGCACACCTGGGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511421 62 - 578057 GC----CGCCCTTCTCCCAG--CCTG---CCGCCCTGAGGAGTGGGT------ACAAGGTCAGGGCACACCTGGGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033441 62 - 110113093 GC----AGCCCTTCTCCCAG--CCTG---CTGCCCTGAGGGGTGGGT------ATAAGGTCAGGGCACACCTGGGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765099 62 - 92844088 GC----TGCCCTTCTCCCTG--CCTG---CTGCCCTCAGGAGTGGGT------ATAAGGTCAGGGCACACCTGGGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96431754 62 + 96509753 GC----TGCCCTTCTCCCTG--CCTG---CTGCCCTCAGGAGTGGGT------ATAAGGTCAGGGCACACCTGGGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902852 62 - 16982598 GC----TGCCCTTCTCCCTG--CCTG---CTGCCCTCAGGAGTGGGT------ATAAGGTCAGGGCACACCTAGGCT i macNem1.NW_012014244v1 I 60 C 0 s cerAty1.NW_012001373v1 3705276 62 - 3785965 GC----TGCCCTTCTCCCTG--CCTG---CTGCCCTCAGGAGTGGGT------ATAAGGTCAGGGCACACCTGGGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90284395 62 - 90373283 GC----TGCCCTTCTCCCTG--CCTG---CTGCCCTCAGGAGTGGGT------ATAAGGTCAGGGCACACCTGGGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97684 62 - 179258 GC----TGCCCTTCTCCCTG--CCTG---CTGCCCTCAGGAGTGGGT------ATAAGGTCAGGGCACACCTGGGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574694 62 - 5823884 GC----TGCCCTTCTCCCTG--CCTG---CTGCCCTCAGGAGTGGGT------ATAAGGTCAGGGCACACCTAGGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55755 46 + 372756 ----------------------GCTG---CTGCCCTGAGGAGTGGGT------ATAAGGTTGGGGCACACCTGGGAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291829 46 + 16356641 ----------------------GTTG---CTGCCCTGAGGAGTGGGT------ATAAGGTTGGGGCACACCTGGGAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161187 46 + 1231380 ----------------------GCTG---CTGCCCTGAGGAGTGGGT------ATAAGGTTGGGGCACACCTGGGAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693467 46 + 11732439 ----------------------GCTG---CTGCCCTGAGGAGTGGGT------ATAAGGTTGGGGCACACCTGGGAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22855330 61 + 22939663 GC----CACCCCTTCCCCA---TCTG---CTCCCCCAAGTGGTGGGT------GTAAGGTCAGGGCAGACCTGGGAT i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 254325 77 - 397369 GCTGTGTGCCCGCCTTCCAGGACCAGAGACCGCCCCGAGGACTTGGCCCTGAGGCGAGGTTTGGTCCCGGCTGGCCG i dasNov3.JH569290 C 0 I 969 e proCoq1.NW_012150197v1 1867684 508 - 2029793 I e canFam3.chr24 47615496 0 + 47698779 C e mm10.chr2 181802021 0 + 182113224 C e micMur3.chr18 56873383 572 + 57149010 I a score=276446.000000 s hg38.chr20_KI270870v1_alt 121022 35 + 183433 GTGAGGGGCCTTTGTGAGGGCAGAGTGGCAACTGG s panTro5.chr20 66447161 35 + 66533130 GTGAGGGGCCTTTGTGAGGGCAGAGTGGCAACTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122307 35 + 62195757 GTGAGGGGCCTTTGTGAGGGCAGAGTGGCAACTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511483 35 - 578057 GTGAGGGGCCTTTGTGAGGGCAGAGTGGCAACTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033503 35 - 110113093 GTGAGGGGCCTTTGTGTGGGCAGAGCAGCAACTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765161 31 - 92844088 GTGAGGGCCCTT----TGGGCAGAGCAGCAACTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96431816 31 + 96509753 GTGAGGGCCCTT----TGGGCAGAGCAGCAACTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902914 31 - 16982598 GTGAGGGCCCTT----TGGGCGGAGCAGCAACTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3705338 31 - 3785965 GTGAGGGCCCTT----TGGGCAGAGCAGCAACTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90284457 31 - 90373283 GTGAGGGCCCTT----TGGGCAGAGCAGCAACTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97746 31 - 179258 GTGAGGGCCCTT----TGGGCAGAGCAGCAACTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574756 35 - 5823884 GTGAGGGCCCTTTGTGTGGGCAGAGCAGCAACTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55801 34 + 372756 GTGAGGGGCCTT-GCCGTGGCAGAGCAGCAGCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291875 34 + 16356641 GTGAGGGGCCTT-GCCGTGGCAGAGCAGCAGCTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161233 34 + 1231380 GTGAGGAGCCTT-GCCGTGGCAGAGCAGCAGCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693513 34 + 11732439 GTGAGGGGCCTT-GCCGTGGCAGAGCGGCAGCTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22855391 35 + 22939663 GGGAGGGGCCTGTGCATGGGCACAGTAGCACCCAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802021 20 + 182113224 --------------CTTTGGCAG-GTGTCAGCTGA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1867684 508 - 2029793 I e canFam3.chr24 47615496 0 + 47698779 C e micMur3.chr18 56873383 572 + 57149010 I e dasNov3.JH569290 254402 969 - 397369 I a score=3355215.000000 s hg38.chr20_KI270870v1_alt 121057 358 + 183433 AGGTGCAGTCACCCAGTGGTGTTGCTGCCTTAACCCT-ACGAGC------TCCCGAGAGAGCAGGGGGCGGCCTGCAGAGGAGGGAGCAATGCACCCTCTGTGAAGAGAGGTACAACAACCATGT-GAGAGCCAGGTGAATACTTTGTGTCCTACCCACATTCAGAAAACCTCTGCACACTGGCTCTTGCTCCTGAGTGGGAAGGGCAGACATGAACAGTAACCTCGGCA-GGCCAGGACTGTGCTCTGGGCTGCTTTGTGGGAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCGACCACCCTCGAGGTGTAGTTGTTGACTGGTCTTCTATGGTGAGGGGGGACTACTCCTCCAGCCTTACCCT s panTro5.chr20 66447196 358 + 66533130 AGGTGCAGTCACCCAGTGGTGTTGCTGCCTTAATCCT-ATGAGC------TCCCGAGAGAGCAGGGGGCGGCCTGCAGAGGAGGGAGCAATGCACCCTCTGTGAAGAGAGGTACAACAACCATGT-GAGAGCCAGGTGAATACTTTGTGTCCTACCCACATTCAGAAAACCTCTGCACACTGGCTCTTGCTCCTGAGTGGGAAGGGCAGACATGAACAGTAACCTCGGCA-GGCCAGGACTGTGCTCTGGGCTGCTTTGTGGGAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCGATCACCCTCGAGGTGTAGTTGTTGACTGGTCTTCTATGGTGAGGGGGGACTACTCCCCCAGCCTTACCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122342 358 + 62195757 AGGTGCAGTCACCCAGTGGTGTTGCTGCCTTAATCCT-ATGAGC------TCCCGAGAGAGCAGGGGGCGGCCTGCAGAGGAGGGAGCAATGCACCCTCTGTGAAGAGAGGTACAACAACCATGT-GAGAGCCAGGTGAATACTTTGTGTCCTACCCACATTCAGAAAACCTCTGCACACTGGCTCTTGCTCCCGAGTGGGAAGGGCAGACATGAACAGTAACCTCGGCA-GGCCAGGACTGTGCTCTGGGCTGCTTTGTGGGAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCGACCACCCTCGAGGTGTAGTTGTTGACTGGTCTTCTATGGTGAGGGGGGACTACTCCCCCAGCCTTACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511518 358 - 578057 AGGTGCAGTCACCCAGTGGTGTTGCTGCCTTAACCCT-ATGAGC------TCCCGAGAGAGCAGGGGGCGGCCTGCAGAGGAGGGAGCAATGCACCCTCTGTGAAGAGAGGTACAATGACCATGT-GAGAGCCAGGTGAATACTTTGTGTCCTACCCACATTCAGAAAACCTCTGCACACTGGCTCTTGCTCCTGAGTGGGAAGGGCAGACATGAACAGTAACCTTGGCA-GGCCAGGACTGTGCTCTGGGCTGCTTTGTGGGGGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCGACCACCCTCGAGGTGTAGTTGTTGACTGGTCTTCTGTGGCGAGGGGGGACTACTCCCCCAGCCTTACCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033538 338 - 110113093 AGGTGCAGTCACCCAGTGGTGTTGCTGCCTTGACT----GGGGC------TCCCAAGAGAGCAGGGGGCAGCCTGCAGAGGAGTGAGCAATGCGCCCTCTGTGAAGAGAGGTACAATGACCATGTGGAGAGCCAGGTGAATACTTTGTGTCCTACCC-----------ACCTCTGCACACTGGCTCTTGCTCCTGAGTGGAAAGGGCAGACATGAACAGTAGCCTCGGCA-GGCCAGGACTGTACTCTGGGATGCTTTGTGGGAGTTCTGAGGC-------GAAGTGAAGCTTCCCGACCACCCTCGAGGTGTAGCTGTTGACTGGTCTTCTGTGGCGAGGGGGGACCAGTCCCCCAGCCTTACCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765192 364 - 92844088 AGGTGCAGTCACCTCGTGGGGTTGCTGCCGTGACCCCTATGAGCTGGGGGTCTCAAGAGATCAGGGGGCGGCCTGTGGAGGAGCGAGCAATGCACCCTCTGTGAAGAGAGGTACAATGACCATGTGGAGAGCCAGGTGAATGC-TTGTGTCCTGCCCACAGTCAGAAAACCTCTGCACACTGGCTCTTGCTCCTGCGTGGAAAGGGCGGACAGGAACAGTAACCTCGGCA-GGCCAGGACTGTACTCTGGGCTGCTTTGTGGCAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCAACCGCCCTCGAGGTATAGTTGTTGACGCATCTTCTATGGCAAGGGGGT-CTACTCCCCCAGCCTTACCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96431847 364 + 96509753 AGGTGCAGTCACCTCGTGGGGTTGCTGCCTTGACCCCTATGAGCTGGGGGTCTCAAGAGATCAGGGGGCGGCCTGTGGAGGAGCGAGCAATGCACCCTCTGTGAAGAGAGGTACAATGACCATGTGGAGAGCCAGGTGAATGC-TTGTGTCCTGCCCACAGTCAGAAAACCTCTGCACACTGGCTCTTGCTCCTGCGTGGAAAGGGCGGACAGGAACAGTAACCTCGGCA-GGCCAGGACTGTACTCTGGGCTGCTTTGTGGCAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCAACCGCCCTCGAGGTATAGTTGTTGACGCGTCTTCTATGGCAAGGGGGT-CTACTCCCCCAGCCTTACCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16902945 363 - 16982598 AGGTGCAGTCACCTCGTGGGGTTGCTGCCTTGACCCCTGTGAGCTGGGGGTCTCAAGAGATCAGGGGGCGGCCTGTGGAGGAGCGAGCAATGCACCCTCTGTGAAGAGAGGTGCAATGACCATGTGGAGAGCCAGGTGAATGC-TTGTGTCCTGCCCACAGTCAG-AAACCTCTGCACACTGGCTCTTGCTCCTGCGTGGAAAGGGCGGACAGGAACGGTAACCTCGGCA-GGCCAGGACTGTACTCTGGGCTGCTTTGTGGCAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCAACCGCCCTCGAGGTATAGTTGTTGACGCGTCTTCTATGGCAAGGGGGT-CTACTCCCCCAGCCTTACCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3705369 364 - 3785965 AGGTGCAGTCACCTCGTGGGGTTGCTGCCTTGACCCCTATGAGCTGGGGGTCTCAAGAGAGCAGGGGGCGGCCTGTGGAGGAGCGAGCAATGCACCCTCTGTGAAGAGAGGTACAATGACCATGTGGAGAGCCAGGTGAATGC-TTGTGTCCTGCCCACATTCAGAAAACCTCTGCACGCTGGCTCTTGCTCCTGCGTGGAAAGGGCAGACAGGAACAGTAACCTCGGCA-GGCCAGGACTGTACTCTGGGCTGCTTTGTGGCAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCAACCGCCCTCGAGGCATAGTTGTTGACGCGTCTTCTATGGCAAGGGGGT-CTACTCTCCCAGCCTTACCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90284488 364 - 90373283 AGGTGCAGTCACCTCGTGGGGTTGCTGCCTTGACCCCTATGAGCTGGGGGTCTCAAGAGAGCAGGGGGCGGCCTGTGGAGGAGCGAGCAATGCACCCTCTGTGAAGAGAGGTACAATGACCATGTGGAGAGCCAGGTGAATGC-TTGTGTCCTGCCCACATTCAGAAAACCTCTGCACACTGGCTCTTGCTCCTGCGTGGAAAGGGCAGACACGAACAGTAACCTCGGCA-GGCCAGGACTGTACTCTGGGCTGCTTTGTGGCAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTGCCAACCGCCCTCGAGGTATAGTTGTTGACGCGTCTTCTATGGCAAGGGGGT-CTACTCCCCCAGCCTTACCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 97777 364 - 179258 AGGTGCAGTCACCTCGTGGGGTTGCTGCCTTGACCCCTATGAGCTGGGGGTCTCAAGAGAGCAGGGGGCGGCCTGTGGAGGAGCGAGCAATGCACCCTCTGTGAAGAGAGGTACAATGACCATGTGGAGAGCCAGGTGAATGC-TTGTGTCCTGCCCACATTCAGAAAACCTCTGCACACTGGCTCTTGCTCCTGCGTGGAAAGGGCAGACAGGAACAGTAACCTCGGCA-GGCCAGGACTGTACTCTGGGCTGCTTTGTGGCAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCAGCCGCCCTCGAGGCATAGTTGTTGACGCGTCTTCTATGGCAAGGGGGT-CTACTCTCCCAGCCTTACCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5574791 362 - 5823884 AGGTGCAGTTACTCCATGGGGTTGCTGCCTTGACCCC-ATGAGCTGGGGGTCTCAAGAGAGTAGGGGGCGGCCTGTGGAGGAGCGAGCAATGCACCCTCTGTGAAAAGAGGTACAGTGACCGTGTGGAGAGCCAGGTGAATAC-TTGTGTCCTGCCCACATTCAG-AAACCTCTGCACACTGGCTCTTGCTCCTGAGTGGAAAGGGCAGAGACGAACAGTAACCTCGGCA-GGCCAGGACTGTACTCTGGGCTGCTTTGTGGGAGTTCTGAGGCCCAGGTGGAAGTGAAGCTTCCCGACCGCCCTCGAGGTCTAGTTGTTGACTCGTCTTCTGTGGCGAGGGGGT-CTACTCCCCCAGCCTTACCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 55835 364 + 372756 AGGCACAGTCACCCAGGGGTGCTGCTGCCCACACCCCTGTGAGCTGGGG-TCCCAGGAGAGCAGGGGGCGGCCTGCCTAGGAGTGAGC-ATGCACCCTCCGTGAAGAGAGGTGCAGTGACCACGTGGAGAGCCTGGTGAATGGTTTGTATCCTGGCCACATTCAGAAAACCTCTGTCCACTGGCTGTTGCTCACGAGTGGAAAGGACAGACACAAGCAGTAACCTCGGCA-GGCCAGGGCTGTGCTCTGGGCTGCTTTGTGGGAATTCTGAGGCCCAGGTGGACCTGAAGCTTCCAGACCACCCTCGAGATATAGATGTTGGCTGGTCTTCTGTGGTGAGGGGGGACTACTCCCCCAGCCTTACCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16291909 362 + 16356641 AGGCACCGTCACCCAGGGGTCCTGCTGCCCACACCCCTGTGAGCTGGGG-TCCCAAGAGACCAGGGGGCGACCTGCCCAGGAGTGAGC-CTGCACCCTCTGTGAAGAGAGGTGCAGTGACCACGTGGAGAGCCTGGTGAATGCTTTGTGTCCTGGCCACATTCAGGAAACC-CTGTCCACTGGCTCTTGCTCACGAGTGGAAAGGACAGATACAAGCAGTAACCTTGGCA-GGCCGGGGCTGTGCTCTGGGCTGCTTTGTGGAAGTTCTGAGGCCCAGGTGGACGTGCAGCTTCCAGACCACCCTCAAGGTATAGTTGTTGGCTGGTCTTCTGTGCCGA-GGGGGATTACTCCCCCAGGCTTACCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161267 363 + 1231380 AGGTACAGTCACCCAGGGGTGCTGCTCCCCACACCCCTGTGAGCTGGGG-TCCCAAGAGAGCAAGGGGCGGCCTGCCCAGGAGTGAGC-ATGCGCCCTCTGTGAGGAGAGGTGCAGCGGCCACGTGGAGAGCCTGGTGAACGCTTCGTGTCCTGGTCACATTCAGAAAACCTCTGTTCACTGGCTCTTGCTCATGAGTGGAAAGGACAGACACAAGCAGTAACCTCGGCA-GGCCGGGGCTGTGTTCTGGGCTGCTTTGTGGGAGTTCTGAGGCCCAGGTGGACGTGAAGCTTCCAGACCACCCTCGAGGTACAGTTGTTGGCTGGTCTTCTGTGGTGAGGGGGGACTACTCCCCC-GCCTTACCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693547 358 + 11732439 AGGCACAGTCACCC-GAGGTGCTGCTGCCCACA-CCCTGTGAGCTGGGG-TCCCAAGAGAGCAGGGGGCGGCCTGCCCAGGAGTGA-C-ATGCGCCCTCTGTGGAGAGAGGTGCAGTG-CCACGTggagagcctggtgaatgctttgtgtcctggccacattcagaaaacctctgtccactggctcttgctcacgagtggaaagcacagaCAC-AGCAGTGACCTCGGCG-GGCTGGGGCTGTGCTCTGGGCTGC-TTGTGGGAGTTCTGAGGCCCAGGTGGACGTGCAGCTTCCAGACCACCCTCGAGGTAGAGTCGTTGGCTGGTCTTCTGTGGTGACGCGGGACTACTCCCCCAGCCTTACCCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22855426 261 + 22939663 AGCGGCAGTCATCCTGTGTTGCTGCTGCCTGCACTCCTGTGTGCTGGGGGTCCCAAGAAACCAGAGGGCAGCTTGCAGAGGA-TAAGT-GTGCA----CTGGTCAGAGGGGTCTAATGCCTGTGAAGAAAGCCAGGTGGAGACTTTGTGTCCTGTCAATGCTCATAGAACCTCTGCATATTAG-----------------------CAGACA----CAGGAAGCTCAGCA-GGCCAGGATTGTGCTCT--------------------------CCA--TGGAAGTGAGGCT--------------------------------CATCTTCCGTGATGAGAGGGC------------ACCTCACCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802041 285 + 182113224 AGGGCTGGCCATTCTCTGGTGTTTCTGCAAGTACCCT-GTGAACTAAGGTGATCATGTGAGAAAT------------------------CTGATACTGCTGTGATGAGAGA----------AAGTAGAGAGT------------TTGTGTT---------TTCAGAAAACCTCTGCATAGTAGCTCTTGCTCACGGGTGGAAGG-------------AAAAACCTGGATGTGGATAGGAATGT--CTAGAGTTACTCTGAGTGGGTGATGAGA-TCAAATGGACATGGGGATTCCAGGCTACTGGACAGATTTATTTGTTGGCTCATCTTATCCAAGAAGGGACC-ATACCCCACCAA--------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47615496 303 + 47698779 AGATGTGGTCAC---------------------------TGTGGTGGGGGTCCCGAGAGACCAGGGGGTGGCCCG---AAGGATGGGT-ATGTGCCCTTC----AGAGAGGCCTACTGCCCACGG-GAACGCCGGGGGGAGGCTGAGCATCCTGCCGGTGTT-GGGAAGCGTCTG--CGCTGGCTCTTGCCCACGCTGGG----------------------CCTCTGCT-GGCCAGGACCAAGGTCTGGGCGGTCCTGCGGGGG-GCCATGGTCCAGGTAGAAGCGACACTGTCAGGGTGCACCCACCGTTTAGCGGCCTGC-CGTCTTCCGCAGCAAGAGGCGACTGTATTTCCACGCTTGCCCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1867684 508 - 2029793 I e micMur3.chr18 56873383 572 + 57149010 I e dasNov3.JH569290 254402 969 - 397369 I a score=524330.000000 s hg38.chr20_KI270870v1_alt 121415 54 + 183433 AAGTGCCATGGGTGGCCGTGGCCTCGGTGGGATATG-CTTTCCCCCAGCAGGCTT s panTro5.chr20 66447554 54 + 66533130 AAGTGCCATGGGTGGCCGTGGCCTCGGTGGGATATG-CTTTCCCCCAGCAGGCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122700 54 + 62195757 AAGTGCCATGGGTGGCCGTGGCCTCGGTGGGATATG-CTTTCCCCCAGCAGGCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511876 54 - 578057 AAGTGCCATGGGTGGCCGTGGCCTCGGTGGGATATG-CTTTCCCCCAGCAGGCAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033876 55 - 110113093 AAGTGCCATGGGTGGCCATGGCCTTGGTGGGATTTGCCTTTCCCCCAGCAGGCAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765556 51 - 92844088 AAGTGTCATGGGTGGCCATGGCCTTGGTGGGATATGCCTTTGCCCCAGCA----T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432211 51 + 96509753 AAGTGTCATGGGTGGCCATGGCCTTGGTGGGATATGCCTTTGCCCCAGCA----T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903308 51 - 16982598 AAGTGTCATGGGTGGCCATGGCCTTGGTGGGATATGCCTTTGCCCCAGCA----T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3705733 51 - 3785965 AAGTGTCATGGGCGGCCATGGCCTTGGTGGGATATGCCTTTGCCCCAGCA----T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90284852 51 - 90373283 AAGTGTCATGGGTGGCCATGGCCTTGGTGGCATATGCCTTTGCCCCAGCA----T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98141 51 - 179258 AAGTGTCATGGGTGGCCATGGCCTTGGTGGGATATGCCTTTGCCCCAGCA----T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575153 51 - 5823884 AAGTGTCATGGGTGGCCATGGCCTTGGTGGGATATGCCTTTGCCCCAGTA----T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56199 55 + 372756 GAGTGCCATGGGTGGCCATGGTCTTAGTGGGATGTGCCTTTGCCCCAGCAGGCAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292271 55 + 16356641 GAGTGCCACGGGTGGCCATGGTCTTAGTGGGATGTGCCTTTGCCCCAGCAGGCAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161630 55 + 1231380 GAGTGCCATGGGTGGCCATGGGCTTAGTGGGATGTGCCTTTGCCCCAGCAGGCAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693905 55 + 11732439 GAGTGCCACGGGTAGCCGTGGTCTTAGTGGGGTATGCCTTTGCCCCAGCAGGCAT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1868192 53 - 2029793 AAGTGCCGTAGGTGGCCATGGCCTCTGTGGGATGTGCCTTTG-CCCAGGGGCAC- i proCoq1.NW_012150197v1 I 508 C 0 s otoGar3.GL873542 22855687 53 + 22939663 GAATGTTGTGGGTGTCC-TGGCCTCTGTGGGACGTGCCTTTGCCCCAAGGGTAC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802326 45 + 182113224 GAGTGTTATAAG----------CTTGACAGGATCTGTCTGGGCCATTGTAGTTAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47615799 43 + 47698779 AAGCACCTCGGG-GAGTGTGGCAGTGAAGGAATGTGGCCTCGCC----------- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56873383 572 + 57149010 I e dasNov3.JH569290 254402 969 - 397369 I a score=1382192.000000 s hg38.chr20_KI270870v1_alt 121469 99 + 183433 ATGCTCAGCTGAAAGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAAAGAGGCCAG-TTCCCCATTACGTCACCTCCCTGGGCTGGCTGAGGGACTG------- s panTro5.chr20 66447608 99 + 66533130 ATGCTCAGCTGAAAGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAAAGAGGCCAA-TTCCCCATTACGTCACCTCCCTGGGCTGGCTGAGGGACTG------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122754 99 + 62195757 ATGCTCAGCTGAAAGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAAAGAGGCCAA-TTCCCCATTACGTCACCTCCCTGGGCTGGCTGAGGGACTG------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 511930 99 - 578057 ATGCTCAGCTGAAAGGACTGCCAGAGCTTTTGAGGTCACTTCGTTTGAAAAGAGGCCAA-TTCCCCATTACGTCACCTCCCCGGGCTGGCTGAGGGACTG------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110033931 99 - 110113093 ATGCTCAGCTGAAAGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAAAGAGGCCAG-TTCCCCATTACGTCACCTCTCCAGGCTGGCTGAGGGACTG------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765607 98 - 92844088 ACGCTCAGCTGAAGGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAGAGAGGCCAA-TTCCCCCTGACGTCACCT-CCCGGGCTGGCTGCGGGACTG------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432262 98 + 96509753 ACGCTCAGCTGAAGGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAGAGAGGCCAA-TTCCCCCTGACGTCACCT-CCCGGGCTGGCTGCGGGACTG------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903359 98 - 16982598 ACGCTCAGCTGAAGGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAGAGAGGCCAA-TTCCCCGTCACGTCACCT-CCCGGGCTGGCTGCGGGACTG------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3705784 98 - 3785965 ACGCTCAGCTGAAGGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAGAGAGGCCAA-TTCCCCCTCACGTCACCT-CCCGGGCTGGCTGCGGGACTG------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90284903 97 - 90373283 ATGCTCAGCTGAAGGGACTGCCAGAGCTTTTGAGGCCACTTCCTTTGAAGAGAGGCCAA-TT-CCCCTTACGTCACCT-CCCCGGCTGGCTGCGGGGCTG------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98192 98 - 179258 ACGCTCAGCTGAAGGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAGAGAGGCCAA-TTCCCCCTCACGTCACCT-CCCGGGCTGGCTGCGGGACTG------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575204 99 - 5823884 ACGCTCAGCTGAAGGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGACGAGAGGCCAA-TTCCCCATTACGTCACCTCCCCGAGCTGGCTGAGGGACTG------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56254 99 + 372756 ATGCTCAGCTGAAAGGACTGCCAGAGCTTTTGAGGTCACTTCGTTTGAAAAGAGGCCAA-TTCCCCATTACGTCACCTCCCCAGGCTGGCTGGGGGCCTG------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292326 99 + 16356641 ATGCTCAGCTGAAAGGACTGCCAGAGCTTTTGAGGTCACTTCATTTTAAAAGAGGCCAA-TTCCCCATTACGTCACCTCCCCGGGCTGGCTGAGGGACTG------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161685 98 + 1231380 ATGCTCAGCTG-AAGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAAAGAGGCCAA-TTCCCCATTACGTCACCTCCCCGGGCTGGCTGAGGGACTG------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2693960 99 + 11732439 ATGCTCAGCTGAAAGGACTGCCAGAGCTTTTGAGGTCACTTCATTTGAAAAGAGGCCAA-GTCCCCATTACGTCACCTCCCCGGGCTGGCTGAGGGACTG------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56873955 100 + 57149010 ATGCTCAGCTGAGAGGGCTGCCAGAGCTTTTGAGGCCACTTCATGTGAAAAGGGGCCAAGTTCCCCATCACGTCACGTCTCCATGCTGGCTGAGGGGCTG------- i micMur3.chr18 I 572 I 181 s proCoq1.NW_012150197v1 1868245 100 - 2029793 ATGCTCAGCTGAAAGGGCTGCCAGAGCTTCCGAGGCCTCTTCGTTGGAAAAGAGGCCAAATTCCCTGTTACGTCACCTCTCCAGGCTGGCTGAGGGGCTG------- i proCoq1.NW_012150197v1 C 0 I 55 s otoGar3.GL873542 22855740 98 + 22939663 ATGCTTGGCTGAAAGGACTGCCAGAGCTTTTGAGGTCACTTCGTTTG--AAGAGGCCAAATTCCCTATTATGTGACCTCTCCAGGATGGCTGAGGGGCTA------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802371 87 + 182113224 GTGCTT---TGGAAAGAATACCTAGGCTTTAGAGGTCAGTTTGTTAGAAAAGAGGCTGGATTCCCTATT----------GATGTGCTGTCCCAGGAGCTG------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47615842 80 + 47698779 -------------AAGGCTGCTAGGGCTGCTGAGGTCACTTCATT-GAGAAGAGGCCAA-ACTCCCGAGACTC------------CTGACCCTGTGACTGGTCACCT i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 254402 969 - 397369 I a score=903276.000000 s hg38.chr20_KI270870v1_alt 121568 97 + 183433 GCGCTGGAGCTCACAGTTAACTTTATTCTGACAGATGAAGCTGCTGCCT-CCGTGTCTTAGACTGAGTACTTTC----CT-----GGGCCTGTGTC--------------------------ATCCAGGGTCA s panTro5.chr20 66447707 97 + 66533130 GCGCTGGAGCTCACAGTTAACTTTATTCTGACAGATGAAGCTGCTGCCT-CCGTGTCTTAGACTGAGTACTTTC----CT-----GGGCCTGCGTC--------------------------ATCCAGGGTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122853 97 + 62195757 GCGCTGGAGCTCACAGTTAACTTTATTCTGACAGATGAAGCTGCTGCCT-CCGTGTCTTAGACTGAGTACTTTC----CT-----GGGCCTGCGTC--------------------------ATCCAGGGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512029 97 - 578057 GCGCTGGAGCTCACAGTTAACTTTATTCTGACAGATGAAGCTGCTGCCT-CTGTGTCTTAGACTGAGTACTTTC----CT-----GGGCCTGCGTC--------------------------ATCCAGGGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034030 97 - 110113093 GCGCTGGAGCTCACAGTTGACTTTATTCTGACAGATGAAGCTGCTGCCT-CCATGTCTTAGACTGAGTACTTTC----CT-----GGGCCTGAGTC--------------------------ATCCAGGGTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765705 90 - 92844088 GCGCTGGCGCTCACAGTTGACTTAATTCTGACAGAGGAAGCGACTGCCT-CCGTGTCTTAG-------GCTTAC----CT-----GGGCCTGAGTC--------------------------ATCCAGGGTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432360 90 + 96509753 GCGCTGGCGCTCACAGTTGACTTAATTCTGACAGAGGAAGCGACTGCCT-CCGTGTCTTAG-------GCTTAC----CT-----GGGCCTGAGTC--------------------------ATCCAGGGTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903457 90 - 16982598 GCGCTGGCGCTCACAGTTGACTTAATTCTGACAGAGGAAGCGACTGCCT-CCGTGTCTTAG-------GCTTAC----CT-----GGGCCTGAGTC--------------------------ATCCAGGGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3705882 90 - 3785965 GCACTGGCGCTCACAGTTGACTTAATTCTGACAGAGGAAGCGGCTGCCT-CCGTGTCTTAG-------GCTTAC----CT-----GGGCCTGAGTC--------------------------ATCCAGGGTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285000 90 - 90373283 GCGCTGGCGCTCACAGTTGACTTAATTCTGACAGAGGAAGCTGCTGCCT-CCGTGTCTTAG-------GCTTAC----CT-----GGGCCTGAGTC--------------------------ATCCAGGGTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98290 90 - 179258 GCGCTGGCGCTCACAGTTGACTTAATTCTGACAGAGGAAGCGGCTGCCT-CCGTGTCTTAG-------GCTTAC----CT-----GGGCCTGAGTC--------------------------ATCCAGGGTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575303 90 - 5823884 GCGCTGGCGCTCACAGTTGACTTAATTCTGACAGAGGAAGCTGCTGCCT-CCATGTCTTAG-------GCTTTC----CT-----GGGCCTGAGTC--------------------------ATCCAGGGTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56353 96 + 372756 GCACTGGAGCTCACAGTT-GCTTAATTCTGACAGATGAAGCTGCTGCCT-CCATGTCTTAGACCGAGTACTTTC----CT-----GGGCGTGAGTC--------------------------TTCCAGGGTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292425 97 + 16356641 GCACTGGAGCTCACAGTTGGCTTAATTCTGACAGATGAAGCTGCTGCCT-CCATGTCTTAGACTGAGTACTTTC----CT-----GGGTGTGAGTC--------------------------TTCCAGGGTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161783 97 + 1231380 GCACTGGAGCTCACAGTTGGCTTAATTCTGACAGATGAAGCTGCTGCCT-CCATGTCTTAGACTGAGTACTTTC----CT-----GGGCGTGAGTC--------------------------TTCCAGGGTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694059 96 + 11732439 GCGCTGGAGCTCACAGTCGGCTTAATTCTGACAGATGAAGCTGCCGCCT--CATGTCTTAGACTGAGCACTTTC----CT-----GGGCGTGAGTC--------------------------TTCCAGGGTCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22855838 102 + 22939663 CCCCTAGAGCTTA-GGTCGACTCAATTCTGACTGATAAATCTGTTGCTTCCCCTGTCTTATATTGAGCACTTTC----CTAGAAAGGGCCTGAGTC--------------------------CTTTAGGGTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802458 51 + 182113224 GTAGCTGAGCTCATAGTAG-----ATCCTGAGGA---------------------------------------------------GGGCTAGTGTA--------------------------CTCCAAAGGCA i mm10.chr2 C 0 C 0 s canFam3.chr24 47615922 124 + 47698779 -CCCCGGCAGCCA--GGCAGCTTAATCCTGACAGACGGAGGTGCTCCTG-GGATGTCTTAGGGGGGGTGCTTCCTGGGCA-----GGGCCTGGGCCTCCGCGTGCCCTGGTAGAGGCCACATGCCCAGCGTCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1868345 55 - 2029793 I e micMur3.chr18 56874055 181 + 57149010 I e dasNov3.JH569290 254402 969 - 397369 I a score=488902.000000 s hg38.chr20_KI270870v1_alt 121665 40 + 183433 GTGCCCAGGCTGTGGTCCAAGTGGGGCCCTGGGCTGCCCC s panTro5.chr20 66447804 40 + 66533130 GTGCCCAGGCTGTGGTCCAAGTGGGGCCCTGGACTGCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122950 40 + 62195757 GTGCCCAGGCTGTGGTCCAAGTGGGGCCCTGGACTGCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512126 40 - 578057 GTGCCCAGGCTGTGGTCCAAGTGGGGCCCTGGGCTGCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034127 40 - 110113093 GTGCCCAGGTTGTGGTCCAAGTGGGGCCCTGGGCTGCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765795 39 - 92844088 GTGCCCAGGTTGTGGTCCAAGTGGGGCCCTGGGCTGC-CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432450 39 + 96509753 GTGCCCAGGTTGTGGTCCAAGTGGGGCCCTGGGCTGC-CC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903547 39 - 16982598 GTGCCCAGGTTGTGGTCCAAGTGGGGCCCTGGGCTGC-CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3705972 39 - 3785965 GTGCCCAGGTTGTGGTCCAAGTGGGGCCCTGGGCTGC-CC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285090 39 - 90373283 GTGCCCAGGTTGTGGTCCAAGTGGGGCCCTGGGCTGC-CC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98380 39 - 179258 GTGCCCAGGTTGTGGTCCCAGTGGGGCCCTGGGCTGC-CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575393 40 - 5823884 GTGCCCAGGTTGTGGTCCAAGTAGGGCCCTGGGCTGCGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56449 40 + 372756 GTGCCCACGTTGTGGTCCAAGTGAGGCCCTGGGCTGCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292522 40 + 16356641 ATGCCCACGCTGTGGTCCAAGTGGGGCCCTGGGCTTCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161880 40 + 1231380 GTGCCCACGTTGTGGTCCAAGTGGGGCTCTGGGCTGCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694155 40 + 11732439 GTGCCCACGTCGTGGTCCAAGTGGGGCCCTGGGCTGCCCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1868400 40 - 2029793 GTGCCCAGGTTGTGGTCTGGGTGGGGCCCTGGGCTGCCCC i proCoq1.NW_012150197v1 I 55 I 82 s otoGar3.GL873542 22855940 28 + 22939663 GTGCTCA------GGTCTGGGT-GTGCCCTGGGCT----- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802509 35 + 182113224 GTACCCAAGTTGTGGTCTGAACATAGCCTTTGGTT----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616046 40 + 47698779 GCACCCAGGTTGTGTGGCCTGTGGGACCCCGGGCTTCCCC i canFam3.chr24 C 0 C 0 e micMur3.chr18 56874055 181 + 57149010 I e dasNov3.JH569290 254402 969 - 397369 I a score=927101.000000 s hg38.chr20_KI270870v1_alt 121705 97 + 183433 AGAGCAGCTAACAGAACAAGCGCCAGAGAGGGCTGCAGAATCCAGCCCTGCAAGCT-GGGAAGGGAGAG------GAAGGGGG----TGAGGGCAAGCCTGTCTCCCA s panTro5.chr20 66447844 97 + 66533130 AGAGCAGCTAACAGAACAAGCGCCAGAGAGGGCTGCAGAATCCAGCCCTGCAAGCT-GGGAAGGGAGAG------GAAGGGGG----TGAGGGCAAGCCTGTCTCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62122990 97 + 62195757 AGAGCAGCTAACAGAACAAGCGCCAGAGAGGGCTGCAGAATCCAGCCCTGCAAGCT-GGGAAGGGAGAG------GAAGGGGG----TGAGGGCAAGCCTGTCTCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512166 97 - 578057 AGAGCAGCTAACAGAACAAGCACCAGAGAGGGCTGCAGAATCCAGCCCTGCAAGCT-GGGAAGGGAGAG------GAAGGGGG----TGAGGGCAAGCCTGTCTCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034167 97 - 110113093 AGAGCAGCTAACAGAACCAGAGCCAGAGAGGGTTGCAGGATCCAGCCCTGGAAGCT-GGGAAGGGAGAG------GAGGGGGT----GAGGGGCAAGCCTGTCTCCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765834 97 - 92844088 AGGGCAGCTAACAGAACAAGAGCCAGAGATGGCTGCAGGACCCAGCCCTGGAAGCT-GGGAAGGGAGAG------GACGCGGG----GAGGGGAAAGCCAGCCACCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432489 97 + 96509753 AGGGCAGCTAACAGAACAAGAGCCAGAGATGGCTGCAGAACCCAGCCCTGGAAGCT-GGGAAGGGAGAG------GACGCGGG----GAGGGGAAAGCCAGCCACCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903586 97 - 16982598 GGGGCAGCTAACAGAACAAGAGCCAGAGATGGCTGCAGAACCCAGCCCTGGAAGCT-GGGAAGGGAGAG------GACGCGGG----GAGGGGAAAGCCAGCCACCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706011 97 - 3785965 AGGGCAGCTAACGGAACAAGAGCCAGAGATGGCTGCAGAACCCAGCCCTGGAAGCT-GGCAAGGGAGAG------GACGCGGG----GAGGGGAAAGCCGGCCACCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285129 97 - 90373283 AGGGCAGCTGGCGGAACAAGAGCCAGAGACGGCTGCAGAATCCAGCCCTGGAAGCT-GGGAAGGGAGAG------GACGCGGG----GAGGGGAAGGCCTGTCACCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98419 97 - 179258 AGGGCAGCTAACGGAACAAGAGCCAGAGATGGCTGCAGAACCCAGCCCTGGAAGCT-GGCAAGGGAGAG------GACGTGGG----GAGGGGAAAGCCGGCCACCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575433 98 - 5823884 AGGGCAGCTAACGGAACAAGAGCCAGAGATGGCTACAGAATCCAGCCCTGGAAGCT-GGGAAGGGAGAG------GACGCGGG---TGAGGGGAAAGCCGGTCACCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56489 98 + 372756 GGGGCAGCTAATGGAACAAGAGCCAGAGATGGTTGCAGAATCCTGCCCCGGAAGCT-GGGGAGGGAGAG------GAAGTGGG---TGAGGGGCAAGCCTGTCACCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292562 98 + 16356641 GGGGCAGCTAATGGAACAAGAGCCAGAGATGGTTGCAGAATCCCGCCCTGGAAGTT-GGGAAGGGAGAG------GAAGTGGG---TGAGGGGCAAGCCTGTCACCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1161920 98 + 1231380 GGGGCAGCTAATGGAACAAGAGCCAGAGATGGTTGCAGAATCCCACCCTGGAAGCT-GGGAAGGGAAAG------GAAGTGGG---TGAGGGGCAAGCCTGTCACCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694195 98 + 11732439 GGGGCAGCTAATGGAACAGGAGCCAGAGATGGCTGCAGAATCCCACCCTGGAAGCT-GGGAAGGGAGAG------GAAGTGGG---TGAGGGGCAAGCCTGTCACCCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22855968 78 + 22939663 ---------------------ACCAGAGACAGTTCTAGAATCCGGCCCTGGGAGCTGGGGAAAAGAGAG------GAGAGAGG---TGAGGAGCAAACCTGTCACCAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802544 74 + 182113224 --------------------TGCCTGAGTT---------ATCCAGTCCGGGCATTT-GAAAGGGGAGAGATGGGAGAAGAGGGAGAAGAAGGCTGAATCTGACA---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616086 78 + 47698779 AAGTCGGCTGACGGAGCATGAGCTAGAGACAGGTCCCGAGTGTAGCCTGGTCGGCC-GGGA--------------GGGGCGGG---------------CCGTGGCCCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1868440 82 - 2029793 I e micMur3.chr18 56874055 181 + 57149010 I e dasNov3.JH569290 254402 969 - 397369 I a score=19000.000000 s hg38.chr20_KI270870v1_alt 121802 1 + 183433 G s panTro5.chr20 66447941 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123087 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512263 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034264 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765931 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432586 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903683 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706108 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285226 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98516 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575531 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56587 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292660 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162018 1 + 1231380 G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694293 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56874236 1 + 57149010 G i micMur3.chr18 I 181 C 0 s otoGar3.GL873542 22856046 1 + 22939663 G i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802618 1 + 182113224 G i mm10.chr2 C 0 I 2 s canFam3.chr24 47616164 1 + 47698779 G i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1868440 82 - 2029793 I e dasNov3.JH569290 254402 969 - 397369 I a score=596877.000000 s hg38.chr20_KI270870v1_alt 121803 43 + 183433 ACCCATGCAGAGGAGGCATCTTTGCCCAGAGCTTTCAAGGCCT s panTro5.chr20 66447942 40 + 66533130 ACCCATGCAGAGGAGGCATCTTTGCCCAGAGCTTTCA---CCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123088 40 + 62195757 ACCCATGCAGAGGAGGCATCTTTGCCCAGAGCTTTCA---CCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512264 43 - 578057 ACCCATGCAGAGGAGGCATCTTTGCCCAGAGCTTTCAAGGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034265 43 - 110113093 ACCCATGCAGAGGAGGCATCTTTGCCCAGAGCTTTCAAGGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765932 43 - 92844088 ACCCATGCAGGGGGGGCAGCTTCGCCCAGAGCTTTCAAGGCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432587 43 + 96509753 ACCCATGCAGGGGGGGCAGCTTGGCCCAGAGCTTTCAAGGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903684 43 - 16982598 ACCCATGCAGGGGGGGCAGCTTCGCGCAGAGCTTTCAAGGCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706109 43 - 3785965 ACCCATGCAGAGAAGGCAGCTTCGCCCAGAGCTTTCAAGGCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285227 43 - 90373283 ACCCATGCAGGGGAGGCAGCTTTGCCCAGAGCTTTCAAGGCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98517 43 - 179258 ACCCATGCAGAGAAGGCAGCTTCGCCCAGAGCTTTCAAGGCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575532 43 - 5823884 ACCCATGCAGAGGAGACAGCTTTGCCCAGAGCTTTCAAGGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56588 43 + 372756 ACCCATGCAGAGGAGGCATCTTTGCCCAGAGCTTTCAAGGCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292661 43 + 16356641 ACCCATGCAGAGGAGGCATCTTTGCCCAGAGTTTTCAAGGCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162019 43 + 1231380 ACCCATGTAGAGGAGGCATCTTTGCCCAGAGCTTCCAAGGCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694294 43 + 11732439 ACCCATGCAGAGGAGGCATCTTTGCCCAGAGCTTTCAAGGCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56874237 43 + 57149010 ACCCAGGCAGAGGAGGCATCTTTGTCCGGAGCTTCAAAAGCCT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1868522 43 - 2029793 ACCCAGGCAGAGGAGGCGTCTTTGTCCAGAGCTTTGAAGGCCT i proCoq1.NW_012150197v1 I 82 I 6 s otoGar3.GL873542 22856047 42 + 22939663 ACCCAGGCAGAGT-GGCTACTTTGTCCAGAGCTTTGCAGGCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802621 40 + 182113224 ATCCATGTAGAAGAATC--CTTTGTTCACAGTTTGTAGAGCT- i mm10.chr2 I 2 C 0 s canFam3.chr24 47616165 43 + 47698779 ACCTGCCCAGCGGACGTGCCTTTGCCCAGGGCCGGGAGGGCAC i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 254402 969 - 397369 I a score=235071.000000 s hg38.chr20_KI270870v1_alt 121846 19 + 183433 TTAGGATATATTTCATCTT s panTro5.chr20 66447982 19 + 66533130 TTAGGATATATTTCATCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123128 19 + 62195757 TTAGGATATATTTCATCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512307 19 - 578057 TTAGGATATATTTCATCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034308 19 - 110113093 CTAGTATATATTTCATCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765975 19 - 92844088 TTAGGGTATATTTCATCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432630 19 + 96509753 TTAGGGTATATTTCATCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903727 19 - 16982598 TTAGGGTATATTTCATCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706152 19 - 3785965 TTAGGGTATATTTCATCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285270 19 - 90373283 TTAGGGTATATTTCATCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98560 19 - 179258 TTAGGGTATATTTCATCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575575 19 - 5823884 TTAGGATGTATTTCATCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56631 19 + 372756 TTAGGATATATTTCATCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292704 19 + 16356641 TTAGGATATATTTCATCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162062 19 + 1231380 TTAGGATATATTTCATCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694337 19 + 11732439 TTAGGATATATTTCATCTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56874280 7 + 57149010 TTAGGAT------------ i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22856089 15 + 22939663 TTAGGATGTATTTCA---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802661 18 + 182113224 TTAGAGTATATTTCATTT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616208 19 + 47698779 TGAGGATACACTTCGGCTT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1868565 6 - 2029793 I e dasNov3.JH569290 254402 969 - 397369 I a score=1792437.000000 s hg38.chr20_KI270870v1_alt 121865 134 + 183433 TGTGTGTCCTTGGCATAGAATGTTCCAAAACAGAAACTGACTGGGCAGCTTGTACTGTGAGGGCTCAAGAACAGAGCCAGAGAGAAAACCCCTGTCCTGCAG-AATGACAGGG---TTATTCCCGGCTCTGGGCTTCT s panTro5.chr20 66448001 134 + 66533130 TGTGTGTCCTTGGCATAGAATGTTCCAAAACAGAAACTGACTGGGCAGCTTGTACTGTGAGGGCTCAAGAACAGAGCCAGAGAGAAAACCCCTGTCCTGCAG-AATGACAGGG---TTATTCCCGGCTCTGGGCTTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123147 134 + 62195757 TGTGTGTCCTTGGCATAGAATGTTCCAAAACAGAAACTGACTGGGCAGCTTGTACTGTGAGGGCTCAAGAACAGAGCCAGAGAGAAAACCCCTGTCCTGCAG-AATGACAGGG---TTATTCCCGGCTCTGGGCTTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512326 134 - 578057 TGTGTGTCCTTGGCATAGAATGTTCCAAAACAGAAACTGACTGGGCAGCTTGTACTGTGAGGGCTCAAGAACAGAGCCAGAGAGAAAACCCCTGTCCTGCAG-AATGACAGGG---TTATTCCTGGCTCTGGGCTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034327 133 - 110113093 TGTGTGTCATTGGCACAGAATGTTCCAAAACAGAAACTGACTGAGCAGCTTGTACTTTGA-GGCTCAAGAACAGAGCCAGAGAGAAAACCCCTGTCCTGCAG-AATGACAGGA---TCATTCCCGGCTCTGGGCTTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92765994 133 - 92844088 TGTGTGTCATTGGCATAGAATGTTCCAAAACAGAAACTGACTAGGCAGCTTTTACTTTGAGGGCTCAAGAACAGAGTCAGAGAGAAAACCCCTGCCCTGCAG-AATGACAGGA---TTATTCCTGGCTCT-GGCTTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432649 133 + 96509753 TGTGTGTCATTGGCATAGAATGTTCCAAAACAGAAACTGACTAGGCAGCTTGTACTTTGAGGGCTCAAGAACAGAGTCAGAGAGAAAACCCCTGCCCTGCAG-AATGACAGGA---TTATTCCCGGCTCT-GGCTTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903746 133 - 16982598 TGTGTGTCATTGGCATAGAATGTTCCAAAACAGAAACTGACTAGGCAGCTTGTACTTTGAGGGCTCAAGAACAGAGTCAGAGAGAAAACCCCTGCCCTGCAG-AATGACAGGA---TTATTCCCGGCTCT-GGCTTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706171 133 - 3785965 TGTGTGTCATTGGCATAGAATGTTCCAAAACAGAAACTGACTAGGCAGCTTGTACTTTGAGGACTCAAGAACAGAGTCAGAGAGAAAACCCCTGCCCTGCAG-AATGACAGGA---TTATTCCCGGCTCT-GGCTTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285289 133 - 90373283 TGTGTGTCATTGGCATAGAATGTTCCACAACAGAAACTGACTAGGCAGCTTGTACTTTGAGGGCTCAAGAACAGAGTCAGAGAGAAAACCCCTGCCCTGCAG-AATGACAGGA---TTATTCCCGGCTCT-GGCTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98579 133 - 179258 TGTGTGTCATTGGCATAGAATGTTCCAAAACAGAAACTGACTAGGCAGCTTGTACTTTGAGGACTCAAGAACAGAGTCAGAGAGAAAACCCCTGCCCTGCAG-AATGACAGGA---TTATTCCCGGCTCT-GGCTTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575594 132 - 5823884 TGTGTGTCATTGGCATAGAATGTTCCAAAACAGAAACTGACTAGGCAGCTTGTACTTTGAGGGCTCAAGAACAGAGTCAGAGAGAAAACCCC-GCCCTGCAG-AATGACAGGA---TTATTCCCGGCTCT-GGCTTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56650 133 + 372756 TGTG-GTCATTGGCGTAGAATGTTCTAAAACAGAAACTGACTGGGCAGCTTGTACTTTGAGGGCTCAAGGGCAGAGCCAGAGAGAAAAGCCCTGTCCTGCAG-AAAGACAGAA---TTATTCCCAGCTCTGGGCTTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292723 134 + 16356641 TGTGTGTCATTGGCGTAGAATGTTCCAAAACAGAAACTGACTGGGCAGCTTGTACTTTGAGGGCTCAAGGGCAGAGCCAGAGAGAAAAGCCCTGTCCTGTAG-AGAGACAGGA---TTATTCCCGGCTCTGGGCTTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162081 134 + 1231380 TGTGTGTCATTGGCATAGAATGTTCCAAAGCAGAAACTGACTGGGCAGCTTGTACTTTGAGGGCTCAAGGGCAGAGCCAGAGAGAAAAACCCTGTCCTGCAG-AAAGACAGGA---TTATTCCCAGCGCTGGGCTTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694356 129 + 11732439 TGTGTGTCATAGGCATAGAATGTTCCAAAACAGAAACTGACTGGGCAGCTTGTACTTTGAGGGCTCAAGGGCAGAGCCAGAGAGAAAAGCCCCGTCCTGCAG-AAAGACAGGA---TTATTCC-----CTGGGCTTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56874287 136 + 57149010 -GTGTGTCATTGGCTTAGAATTTCCCCAAACAGAAACTGACTGAGTAGCTTGTACTTTGAGGGCTTGAGGACAGAGCCAGAGGGAAAA-ACCCGTCCTGCAGAAGCGACAGGCCTGTTACTCCTGGCTCTGGGCTTCT i micMur3.chr18 C 0 I 98 s proCoq1.NW_012150197v1 1868571 135 - 2029793 TGTGTGTCATTGGCTTAGAATTTCCCAAAACAGAAACTGACTGCGCAGCTTGTACTTTGAGGGCTTGAGGACAGAGCCGGAGGGAAAATACCCATCCTGCAGGAATGACAGGC---TTATTCCTGGCTCTGGGCTTCT i proCoq1.NW_012150197v1 I 6 C 0 s otoGar3.GL873542 22856104 129 + 22939663 --CATGTCATTGCCTTAGAATTTCCCTAAACAGAAACCAA----GTAGTTTGTACTTTGAGGGCTTGAGGGTAGAGCTAGAGGAAAAATCCCTGTCCTGCAAAAATGACCAAC---TCATTCCTGGCTCTGGGCCTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802679 119 + 182113224 --TCTGT----------GAATTATCCCAAATAGAATTGGCCTGAGAAATTTGTTCTCTGTGG--TTGAGGACAGAGATGGAGGAACAA--TCTGTCTTGTGGGGATGACAGGT---GTGTTACTGACCCTGGGCTTTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47616227 101 + 47698779 --TGTGTCATTG-CTTAGAGTTTCCCCAGACAGAAACGGATGGGGCCGCTGCTACTCT-CGGGCTGGAGG--CGAGCGAGAGAG-----CCGGGGTCTGCGG---------GG------TTCCCGGC----------- i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 254402 969 - 397369 I a score=6083.000000 s hg38.chr20_KI270870v1_alt 121999 1 + 183433 C s panTro5.chr20 66448135 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123281 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512460 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034460 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92766127 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432782 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903879 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706304 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285422 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98712 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575726 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56783 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292857 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162215 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694485 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1868706 1 - 2029793 T i proCoq1.NW_012150197v1 C 0 I 43 s canFam3.chr24 47616328 1 + 47698779 C i canFam3.chr24 C 0 C 0 e mm10.chr2 181802798 0 + 182113224 C e micMur3.chr18 56874423 98 + 57149010 I e dasNov3.JH569290 254402 969 - 397369 I e otoGar3.GL873542 22856233 0 + 22939663 C a score=466042.000000 s hg38.chr20_KI270870v1_alt 122000 49 + 183433 TGGAGTTCACCTGGAGTTCTCACATCTG-AATGACCTTGCCGTGAGACAC s panTro5.chr20 66448136 49 + 66533130 TGGAGTTCACCTGGAGTTCTCACATCTG-AATGACCTTGCCGTGAGACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123282 49 + 62195757 TGGAGTTCACCTGGAGTTCTCACATCTG-AATGACCTTGCCGTGAGACAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512461 49 - 578057 TGGAGTTCACCTGGAGTTCTCACATCTG-AATGACCTTGCCGTGAGACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034461 45 - 110113093 ----GTACACCTGGAGTTCTCATATCTG-AATGACCTTGCCGTGAGACAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92766128 45 - 92844088 ----GCACACCTGGAGTTCTCCCATCTG-AATGACCTTGCCGTGAGACGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432783 45 + 96509753 ----GCACACCTGGAGTTCTCCCATCTG-AATGACCTTGCCGTGAGACGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903880 45 - 16982598 ----GCACACCTGGAGTTCTCCCATCTG-AATGACCTTGCCGTGAGACGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706305 45 - 3785965 ----GCACACCTGGAGTTCTCCCATCTG-AATGACCTTGCCGTGAGACGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285423 45 - 90373283 ----GCACACCTGGAGTCCTCACATCTG-AATGACCTTGCCGTGAGACGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98713 45 - 179258 ----GCACACCTGGAGTTCTCCCACCTG-AATGACCTTGCCGTGAGACGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575727 45 - 5823884 ----GCACACCTGGAGTTCTCACATCTG-AATGACCTTGCCGTGAGACAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56784 45 + 372756 ----GCACACCTGGAGTTCTCACATCTG-AATAACCTTGCTGTGAGACAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292858 45 + 16356641 ----GCACACCTGGAGTTCTCACATCTG-AATAACCTTGCTGTGAGACAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162216 45 + 1231380 ----GCACACCTGGAGTTCTCACGTCTG-AATAACCTTGCTGTGAGACAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694486 45 + 11732439 ----GCACACCTGGAGTTCTCACATCTG-AATAACCTTGCTGTGAGACAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22856233 44 + 22939663 ---TGGAGACCTAGATTTCTCATGTCTG-AACGATTTTACTCTGAGAC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802798 43 + 182113224 -----TACACCTAGAACTCTTGTATCTGAAATGGTGTTGCTCCCAGGA-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616329 27 + 47698779 -----------TGGACTGC----------AATTA--TTGTCTGGGGGCAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1868707 43 - 2029793 I e micMur3.chr18 56874423 98 + 57149010 I e dasNov3.JH569290 254402 969 - 397369 I a score=118827.000000 s hg38.chr20_KI270870v1_alt 122049 13 + 183433 C--CACACACACAGA s panTro5.chr20 66448185 13 + 66533130 C--CACACACACAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123331 13 + 62195757 C--CACACACACAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512510 13 - 578057 C--CACACACACAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034506 13 - 110113093 C--CACACACGCAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92766173 13 - 92844088 C--CACACACGCAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432828 13 + 96509753 C--CACACACGCAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903925 13 - 16982598 C--CACACACGCAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706350 13 - 3785965 C--CACACACGCAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285468 13 - 90373283 C--CACACACGCAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98758 13 - 179258 C--CACACACGCAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575772 13 - 5823884 C--CACACACGCAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56829 15 + 372756 CAATACACACAGAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292903 15 + 16356641 CAGCACACACAGAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162261 15 + 1231380 CAGCACACACAGAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694531 15 + 11732439 CAACACACACAGAGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1868750 13 - 2029793 C--CACACGCTCAGC i proCoq1.NW_012150197v1 I 43 C 0 s otoGar3.GL873542 22856277 13 + 22939663 C--CACATACTCAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802841 13 + 182113224 C--CACATATTTGGC i mm10.chr2 C 0 C 0 e canFam3.chr24 47616356 0 + 47698779 C e micMur3.chr18 56874423 98 + 57149010 I e dasNov3.JH569290 254402 969 - 397369 I a score=586713.000000 s hg38.chr20_KI270870v1_alt 122062 49 + 183433 CACCCAGGACAGGACAGGCATGGAGGGGAAGGCTCAG--AAACCCCTCCTC s panTro5.chr20 66448198 49 + 66533130 CACCCAGGACAGGACAGGCGTGGAGGGGAAGGCTCAG--AAACCCCTCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123344 49 + 62195757 CACCCAGGACAGGACAGGCGTGGAGGGGAAGGCTCAG--AAACCCCTCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512523 49 - 578057 CACCCAGGACAGGACAGGCGTGGAGGGGAAGGCTCAG--AAACCCCTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034519 49 - 110113093 CACCCAGGACAGGACAGGCATGGAGGGGAAGGCTCAG--AAACCCCTCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92766186 49 - 92844088 CACCCAGGACAGGACAGGCGTGGAGGGGGAGGCTCAG--ATATCCCTCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432841 49 + 96509753 CACCCAGGACAGGACAGGCGTGGAGGGGGAGGCTCAG--ATATCCCTCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903938 49 - 16982598 CACCCAGGACAGGACAGGCGTGGAGGGGGAGGCTCAG--ATGTCCCTCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706363 49 - 3785965 CACCCAGGACAGGACAGGCGTGGAGGGGGAGGCTCAG--ATATCCCTCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285481 48 - 90373283 CACCCAGGACAGGACAGGCGTGGA-GGGGAGGCTCAG--ATATCCCTCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98771 49 - 179258 CACCCAGGACAGGACAGGCGTGGAGGGGGAGGCTCAG--CTATCCCTCCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575785 49 - 5823884 CACCCAGGACAGGACAGGCGTGGAGGGGAAGGCTCAG--ATATCCCTCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56844 49 + 372756 CACCCAGGACAGGACAGGTGTGGAGGGCAAGGCTCAG--ATACCCCTCCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292918 49 + 16356641 CACCCAGGACAGGACAGGTGTGGAGGGCAAGGCTCAG--ATACCCCTCCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162276 49 + 1231380 CACCCAGGACAGGACAGGTGTGGAGGGCAGGGCTCAG--ATACCCCTCCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694546 49 + 11732439 CTCCCAGGACAGGACAGGTGTGGAGGGCAAGGCTCAG--ACACCCCTCCTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1868763 49 - 2029793 CACCCAGGGTGGGTCAGGGCTGGAGAAGAAGGCTCAG--ATGTCCCTCCTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22856290 50 + 22939663 TACTCAGGATGGGTCAGCCCAGGAGGAGAA-GCTGAGATATATCCCCCCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802854 48 + 182113224 AAGCTGGGACA-GACATACCTTGGAGAAAAGGCTCAG--ATGTCTCTCCTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47616356 15 + 47698779 ------------------------------TGCTTAG--CTGTCCTC---- i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 255371 46 - 397369 CACGCTGGGGAAGGCTGGCCTGGGGTGAATG---CAG--AGGCTCCTCCTT i dasNov3.JH569290 I 969 C 0 e micMur3.chr18 56874423 98 + 57149010 I a score=2778305.000000 s hg38.chr20_KI270870v1_alt 122111 144 + 183433 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGTAGCTCCAATTCCGATCGGATCCTCAGGTGAGTGAGATGAGCCA s panTro5.chr20 66448247 144 + 66533130 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGTAGCTCCAATTCCGATCGGATCCTCAGGTGAGTGAGATGAGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123393 144 + 62195757 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGTAGCTCCAATTCCGATCGGATCCTCAGGTGAGTGAGATGAGCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512572 144 - 578057 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGTAGCTCCAATTCCGATCGGATCCTCAGGTGAGTGAGATGAGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034568 144 - 110113093 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGACCCCACCAAGAGCAGCTCCAGTTCCGATCGGATCCTCAGGTGAGTGGCATGAGCCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92766235 144 - 92844088 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGCAGCTCCAATTCTGATCGGATCCTCAGGTGAGTGAGATGAGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96432890 144 + 96509753 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGCAGCTCCAATTCTGATCGGATCCTCAGGTGAGTGAGATGAGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16903987 144 - 16982598 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGCAGCTCCAATTCTGATCGGATCCTCAGGTGAGTGAGATGAGCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706412 144 - 3785965 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGCAGCTCCAATTCTGATCGGATCCTCAGGTGAGTGAGATGAGCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285529 144 - 90373283 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGTAGCTCCAATTCTGATCGGATCCTCAGGTGAGTGACATGAGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98820 144 - 179258 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCACGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAGCAGCTCCAATTCTGATCGGATCCTCAGGTGAGTGAGATGAGCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575834 141 - 5823884 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGA---AGCAGCCACAGACAGGAGATCCTTCCAAGAGTAGCTCCAATTCCGATCGGATCCTCAGGTGAGTGAGATGAGCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 56893 144 + 372756 TTTCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCTGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGCAGATCCTTCCAAGAATAGCTCCAATTCTGATCGCATCCTCAGGTGAGTGAGATGAGCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16292967 144 + 16356641 TTCCTTC-CTGTAGTTTGTCTGGGTGTCCCATTGCTGCCGCTGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCCAAGAATAGCTCCAATTCTGATCGGATCCTCAGGTGGGTGAGATGAGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162325 144 + 1231380 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCCGCTGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGACAGGAGATCCTTCGAAGAATAGCTCCAATTCGGATCGGATCCTCAGGTGAGTGAGATGAGCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694595 144 + 11732439 TTCCTTC-CTCTAGTTTGTCTGGGTGTCCCATCGCTGCCGCCGAAAAATTAGCCAAATCCCATGAGAAGCAGCAGCCGCAGCCAGGAGATCCTTCCAAGAATAGCTCCAATTCTGATCGGATCCTCAGGTGAGTGAGATGAGCCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56874521 144 + 57149010 TTCCTTC-CTCTAGTTTATCTGGCTGTCCCATTGCTGCTGCCGAAAAATTAGCCAAATCTCATGAGAAGCAGCAGCCACAGACGGGAGATCCTTCCAAGAATAGCTCCAATTCAGATCGAATCCTCAGGTGAGTGAGAGGAGCCA i micMur3.chr18 I 98 I 984 s proCoq1.NW_012150197v1 1868812 144 - 2029793 TTCCTTC-CTCTAGTTTATCCGGCTGTCCCATTGCTGCTGCCGAAAAATTAGCCAAATCTCATGAGAAGCAGCAGCCGCAGACGGGAGACCCTTCCAAGAACAGCTCCAACTCAGACCGAATCCTCAGGTGAGTGAGAGGAGCCA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22856340 144 + 22939663 TTCCTTC-CTCTAGTTTATCTGGCTGTCCCATTGCTGCTGCTGAAAAATTAGCCAAATCTCATGAGAAGCAGCAGCCACAGATGGGAGACCCTTCCAAGAATAGCTCCAATTCAGATCGGATCCTCAGGTGAGTGAGGGGAGCCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181802902 140 + 182113224 TTCTTTC-CTCTAGTTTATCTGGATGTCCCATTGCTGCTGCTGAAAAATTAGCCAAATCTCATGAGAAGCAGCAATTGCAGACAGGAGATCCTCCCAAAAATAACTCCAATTCAGATCGGATCCTCAGGTAGGTGAGATTA---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616373 145 + 47698779 TGCCTTCTCTCTAGTTTGTCTGGGTGTCCCATTGCTGCTGCTGAAAAATTAGCCAAATCTCATGAGAAGCAACAGCCGCAAACGGGAGATCCTTCCAAGAATAGCTCCAATTCAGATCGGATCCTCAGGTGAGCGAAAGGAGCCA i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 255417 131 - 397369 -GTCTTT-CTCTAGTTTGTCTGGGTGTCCCATTGCTGCTGCGGAAAAACTAGCCAAATCTCACGAGAAGCAACAGCCACAGACGGGGGATCCTTCCAAGAATAGCTCCAACTCAGACCGGATCCTCAGGTGAG------------ i dasNov3.JH569290 C 0 C 0 a score=161070.000000 s hg38.chr20_KI270870v1_alt 122255 12 + 183433 CAGAACTGAAGA s panTro5.chr20 66448391 12 + 66533130 CAGAACTGAAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123537 12 + 62195757 CAGAACTGAAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512716 12 - 578057 CAGAACTGAAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034712 12 - 110113093 CAGAACTGAAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92766379 12 - 92844088 CAGAACTGAAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96433034 12 + 96509753 CAGAACTGAAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16904131 12 - 16982598 CAGAACTGAAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706556 12 - 3785965 CAGAACTGAAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285673 12 - 90373283 CAGAACTGAAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 98964 12 - 179258 CAGAACTGAAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575975 12 - 5823884 CAGAACTGAAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 57037 12 + 372756 CAGAACTGAAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293111 12 + 16356641 CGGAACTGAAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162469 12 + 1231380 TAGAACTGAAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694739 12 + 11732439 CAGAACTGAAGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1868956 12 - 2029793 TAGAACGGAAGA i proCoq1.NW_012150197v1 C 0 I 311 s otoGar3.GL873542 22856484 12 + 22939663 TAGAACTGAAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803042 4 + 182113224 -------GAAG- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616518 12 + 47698779 GAGAACCAAAGG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 255548 7 - 397369 CAGAAGC----- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56874665 984 + 57149010 I a score=484810.000000 s hg38.chr20_KI270870v1_alt 122267 67 + 183433 GGCTGCCT-CCCAAAT-GCCTGCA-GAGGGCTTCTCAGTCTCCCGCAG-GCTGTA-TGTGCAtgtgtgtgag s panTro5.chr20 66448403 67 + 66533130 GGCTGCCT-CCCAAAT-GCCTGCA-GGGGGCTTCTCAGTCTCCCGCAG-GCTGTA-TGTGCAtgtgtgtgag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123549 67 + 62195757 GGCTGCCT-CCCAAAT-GCCTGCA-GGGGGCTTCTCAGTCTCCCGCAG-GCTGTA-TGTGCAtgtgtgtgag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512728 67 - 578057 GGCTGCCT-CCCAAAT-GCCTGCA-GGGGGCTTCTCAGTCTCCCGCAG-GCtgta-tgtgcatgtgtgtgag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034724 68 - 110113093 GGCTGCCT-CCCAAAT-GCCTGCAGGGGGGCTTCTCAGTCTCCCGCAG-GCTgtg-tgtgcatgtgtgtgag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92766391 66 - 92844088 GGCTGCCT-CCTAAAT-GCCTGCA-GGG-GCTTCTTAGTCTCCTGCAG-GCTGTG-TGTGCACATGtgtgag i rheMac8.chr10 C 0 I 1399 s macFas5.chr10 96433046 66 + 96509753 GGCTGCCT-CCTAAAT-GCCTGCA-GGG-GCTTCTTAGTCTCCTGCAG-GCTGTG-TGTGCACATGtgtgag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16904143 67 - 16982598 GGCTGCCT-CCTAAAT-GCCTGCA-GGGAGCTTCTGAGTCTCCTGCAG-GCTGTG-TGTGCACATGTGTGAG i macNem1.NW_012014244v1 C 0 I 1238 s cerAty1.NW_012001373v1 3706568 67 - 3785965 GGCTGCCT-CCCAAAT-GCCTGCA-GGGGGCTTCTTAGTCTCCTGCAG-GCTGTG-TGTGCACATGTGTGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90285685 67 - 90373283 GGCTGCCT-CCCAAAT-GCCTGCA-GGGGGCTTCTTAGTCTCCTGCAG-GCTGTG-CGTGCACATGTGTGAG i chlSab2.chr2 C 0 I 1318 s manLeu1.NW_012101652v1 98976 67 - 179258 GGCTGCCT-CCCAAAT-GCCTGCA-GGGGGCCTCTTAGTCTCCTGCAG-GCTGTG-TGTGCACGTGTGTGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5575987 67 - 5823884 GGCTGCCT-CCCAAGT-GCCTGCA-GGGGGCTTCTTAGTCTCCCGCAG-GCTTTG-TGCGCACGTgtgtgag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 57049 50 + 372756 -GCTGCCT-CCCAGAT-GCCTGCA-GGGGGCTCCTCAGTCTCCCCCAG-GATGTA----------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293123 50 + 16356641 -GCTGCCT-CCCAAAT-GCCTGCA-GGGAGCTCCTCAGTCT-CCCCAG-GAtgtat---------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162481 50 + 1231380 -GCTGCCT-CCCAAAT-GCCTGCA-GGGGCCTCCTCAGTCTCCCCCAG-GATGTA----------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694751 50 + 11732439 -GCTGCCT-CCCAAAT-GCCTGCA-GGGGGCTCCTCAGTCTCCCCCAG-GATATA----------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22856496 63 + 22939663 AGTTACCT-TCCAGAC--CTGGCA-GGAGACATCCTGATCTCTCCCTGTGCCGAT-TGTGCCGATGTG---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803046 27 + 182113224 ---TACTT-TCCAAAT-ATCTTCA-GGG-ACTTC-------------------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616531 37 + 47698779 GCCCGCCTCCCCAAAT-GCCTCTG-GG----------------------GCTGCG-TGTGCA---------- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 255555 48 - 397369 CACCGCTC-CTCGGGGAGCCTGCA-GGG-CCTTCCC--TCCCTCCCAG-CCTGC------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1868968 311 - 2029793 I e micMur3.chr18 56874665 984 + 57149010 I a score=45395.000000 s hg38.chr20_KI270870v1_alt 122334 10 + 183433 tgcatgtg--------tg s panTro5.chr20 66448470 10 + 66533130 tgcatgtg--------tg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123616 10 + 62195757 tgcatgtg--------tg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512795 8 - 578057 tgcatgtg---------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034792 8 - 110113093 tgcgcgtg---------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92767856 10 - 92844088 TGCATGTG--------TG i rheMac8.chr10 I 1399 C 0 s macFas5.chr10 96433112 18 + 96509753 tgcacgtgtgagtgcatg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16905448 10 - 16982598 TGCATGTG--------TG i macNem1.NW_012014244v1 I 1238 C 0 s cerAty1.NW_012001373v1 3706635 10 - 3785965 TGCACGTG--------TG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287070 10 - 90373283 tgcatgtg--------tg i chlSab2.chr2 I 1318 C 0 s manLeu1.NW_012101652v1 99043 10 - 179258 TGCACGTG--------TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5576054 10 - 5823884 tgcacgtg--------tg i colAng1.NW_012114444v1 C 0 I 1505 s canFam3.chr24 47616568 10 + 47698779 CGCGGGTG--------TG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 255603 6 - 397369 ----TGTG--------TG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1868968 311 - 2029793 I e mm10.chr2 181803073 0 + 182113224 C e micMur3.chr18 56874665 984 + 57149010 I e saiBol1.JH378156 16293173 0 + 16356641 C e cebCap1.NW_016107870v1 1162531 0 + 1231380 C e calJac3.chrUn_GL286459 57099 0 + 372756 C e aotNan1.NW_018500483v1 2694801 0 + 11732439 C e otoGar3.GL873542 22856559 0 + 22939663 C a score=18326.000000 s hg38.chr20_KI270870v1_alt 122344 6 + 183433 tgagtg---- s panTro5.chr20 66448480 6 + 66533130 tgagtg---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123626 6 + 62195757 tgagtg---- i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92767866 6 - 92844088 TGACTG---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96433130 6 + 96509753 tgagtg---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16905458 6 - 16982598 TGACTG---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3706645 6 - 3785965 TGAGTG---- i cerAty1.NW_012001373v1 C 0 I 2112 s chlSab2.chr2 90287080 6 - 90373283 TGACTG---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 99053 6 - 179258 TGAGTG---- i manLeu1.NW_012101652v1 C 0 I 2150 s mm10.chr2 181803073 4 + 182113224 --AGTG---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616578 6 + 47698779 TGAGTG---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 255609 6 - 397369 ----TGCACA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1868968 311 - 2029793 I e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e micMur3.chr18 56874665 984 + 57149010 I e gorGor5.CYUI01015848v1 512803 0 - 578057 C e saiBol1.JH378156 16293173 0 + 16356641 C e cebCap1.NW_016107870v1 1162531 0 + 1231380 C e calJac3.chrUn_GL286459 57099 0 + 372756 C e aotNan1.NW_018500483v1 2694801 0 + 11732439 C e nomLeu3.chr13 110034800 0 - 110113093 C e otoGar3.GL873542 22856559 0 + 22939663 C a score=-6451.000000 s hg38.chr20_KI270870v1_alt 122350 27 + 183433 tacgtgcatgtgagtgtacgtgcatg--t s panTro5.chr20 66448486 27 + 66533130 tacgtgcatgtgagtgtacgtgcatg--t i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123632 27 + 62195757 tacgtgcatgtgagtgtacgtgcatg--t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512803 19 - 578057 --------tgtgagtgtacgtgcatg--t i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034800 19 - 110113093 --------tgtgagtgtaggtgcatg--t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92767872 28 - 92844088 CATGTGTGTGTGACGGCACGTGCAGGAA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96433136 22 + 96509753 catgtgtgtg----agtgcatgtgag--- i macFas5.chr10 C 0 I 1389 s macNem1.NW_012014244v1 16905464 26 - 16982598 CATGTGTGTGTGACGGCACGTGCAGG--- i macNem1.NW_012014244v1 C 0 I 2 s chlSab2.chr2 90287086 24 - 90373283 CACGTGTGTG--ACTGCACGTGCAGG--- i chlSab2.chr2 C 0 C 0 s calJac3.chrUn_GL286459 57099 9 + 372756 ------------------TGTGCATG--T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293173 24 + 16356641 ---gtgcatgtgagtgtgtgtgcatg--t i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162531 9 + 1231380 ------------------TGTGCATG--T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694801 9 + 11732439 ------------------TGTGCATG--T i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22856559 19 + 22939663 --------TGTGAGTGTACATGCCTG--T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803077 13 + 182113224 -------TTATGGCTGTGTG--------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616584 26 + 47698779 TTTGTGCATGCGTGTGCTCGTGTCCT--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 255615 24 - 397369 CACATGCACACACATCAATGCCTA----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1868968 311 - 2029793 I e cerAty1.NW_012001373v1 3706651 2112 - 3785965 I e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e micMur3.chr18 56874665 984 + 57149010 I e manLeu1.NW_012101652v1 99059 2150 - 179258 I a score=24981.000000 s hg38.chr20_KI270870v1_alt 122377 3 + 183433 gag s panTro5.chr20 66448513 3 + 66533130 gag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123659 3 + 62195757 gag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512822 3 - 578057 gag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034819 3 - 110113093 gag i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3708763 3 - 3785965 GAG i cerAty1.NW_012001373v1 I 2112 C 0 s chlSab2.chr2 90287110 2 - 90373283 -AG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101209 3 - 179258 GAG i manLeu1.NW_012101652v1 I 2150 C 0 s calJac3.chrUn_GL286459 57108 3 + 372756 GAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293197 3 + 16356641 gag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162540 3 + 1231380 GAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694810 3 + 11732439 GAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22856578 3 + 22939663 GAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803090 1 + 182113224 --G i mm10.chr2 C 0 C 0 s canFam3.chr24 47616610 3 + 47698779 GAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1868968 311 - 2029793 I e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 255639 0 - 397369 C e macNem1.NW_012014244v1 16905490 2 - 16982598 I e rheMac8.chr10 92767900 0 - 92844088 C e macFas5.chr10 96433158 1389 + 96509753 I a score=2006546.000000 s hg38.chr20_KI270870v1_alt 122380 227 + 183433 tgtgCACATGCCCCGGGCCCCCCAGGAGCAGAACTGCGGGGCAGTTTTGGAGCCACACAGGACAGAGTCTCATGTCTACCACATTCGCCAGTGCCTCAGCCAAAGCGCAAACTCCTGCACAGTTGCCTCTGCCTCCGACATGGGG--CTCTGCC------TCCTTGGAGTCGTCTGATGTGACCACTTGAGGCCCCTTGGGGATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGGAA s panTro5.chr20 66448516 215 + 66533130 tgtgCACATGCCCCGGGCCCCCCAGGAGCAGAACTGCGGGACA------------CACAGGACAGAGTCTCATGTCTGCCACATTCGCCAGTGCCTCAGCCAAAGCGCAAACTCCTGCACAGTTGCCTCTGCCTCCGACATGGGG--CTCTGCC------TCCTCGGAGTTGTCTGATGTGACCACTTGAGGCCCCTTGGGGATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123662 215 + 62195757 tgtgCACATGCCCCGGGCCCCCCAGGAGCAGAACTGCGGGACA------------CACAGGACAGAGTCTCATGTCTGCCACATTCGCCAGTGCCTCAGCCAAAGCGCAAACTCCTGCACAGTTGCCTCTGCCTCCGACATGGGG--CTCTGCC------TCCTCGGAGTTGTCTGATGTGACCACTTGAGGCCCCTTGGGGATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 512825 226 - 578057 tgtgCACATGCCCCGGG-CCCCCAGGAGCAGAACTGCGGGGCAGTTTTGGAGCCACACAGGACAGAGTCTCATGTCTGCCAGATTCGCCAGTGCCTCAGCCAAAGCGCAAACTCCTGCACAGTTGCCTCTGCCTCCGACATGGGG--CTCTGCC------TCCTCGGAGTCGTCTGATGTGACCACTTGAGGCCCCTTGGGGATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110034822 220 - 110113093 tgtg-aCATGCCCCGGGCCCCCCAGGAGCAGAACTGAGGGGCAGTTTTGGAGCCACACAGGACAGAGTCTCATGTCTGCCACATTCGCCAGTGCCTCAGCGAAAGCACAAACTCCTGCACAGCTGCCTCTGCCTC------AGTG--CTCTGCC------TCCTTGGAGTCGTCTGATGTGACCACTTGAGGCCCCTTGGGGATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92767900 227 - 92844088 TGTGCACATGCCCCGGGTTGCCCAGGAGCAGGACTGTGGGGCAGTTTTGGGGCCACACAGGACAGAGTCTCATGTCTGCCACGTTCGCCAGTGCCTCAGCCAAAGCACAAACTCCCGCACAGCTGCCTCTGCCCTGGACATGGTG--CTCTGCC------TCCTCAGAGTCGTCTGATGTGACCACTTGAGGCTCCTTGGGAATT-------CATTTATGGAGATGC-TGGTCCTGTCTGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96434547 227 + 96509753 TGTGCACATGCCCCGGGCCGCCCAGGAGCAGGACTGTGGGGCAGTTTTGGGGCCACACAGGACAGAGTCTCATGTCTGCCACGTTCGCCAGTGCCTCAGCCAAAGCACAAACTCCCGCACAGCTGCCTCTGCCCTGGACATGGTG--CTCTGCC------TCCTCAGAGTCGTCTGATGTGACCACTTGAGGCTCCTTGGGAATT-------CATTTATGGAGATGC-TGGTCCTGTCTGGAG i macFas5.chr10 I 1389 C 0 s macNem1.NW_012014244v1 16905492 227 - 16982598 TGTGCACATGCCCCGGGCCGCCCAGGAGCAGGACTGTGGGGCAGTTTTGGGGCCACACAGGACAGAGTCTCATGTCTGCCACGTTCGCCAGTGCCTCAGCCAAAGCACAAACTCCCGCACAGCTGCCTCTGCCCTGGACATGGTG--CTCTGCC------TCCTCAGAGTCGTCTGATGTGACCACTTGAGGCTCCTTGGGAATT-------CATTTATGGAGATGC-TGGTCCTGTCTGGAG i macNem1.NW_012014244v1 I 2 C 0 s cerAty1.NW_012001373v1 3708766 227 - 3785965 TGTGCACATGCCCCGGGCCGCCCAGGAGCAGGACTGTGGGGCAGTTTTGGGGCCACACAGGACAGAGTCTCATGTCTGCCACGTTCGCCAGTGCCTCAGCCAAAGCACAAACTCCCGCACAGCTGCCTCTGCCCTGGACATGGTG--CTCTGCC------TCCTCAGAGTCGTCTGATGTGACCACTTGAGGCTCCTTGGGAATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287112 227 - 90373283 TGTGCACATGCCCCGGGCTGCCCAGGAGCAGGACTGTGGGGCAGTTTTGGGGCCACACAGGACAGAGTCTCATGTCTGACACGTTCGCCAGTGCCTCAGCCAAAGCACAAACTCCCGCACAGCTGCCTCTGCCCTGGACATGGTG--CTCTGCC------TCCTCAGAGTCGTCTAATGTGACCACTTGAGGCTCCTTGGGAATT-------CGTTTGTGGAGATGC-TGGTCCTGTCTGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101212 227 - 179258 TGTGCACATGCCCCGGGCTGCCCAGGAGCAGGACTGTGGGGCAGTTTTGGGGCCACACAGGACAGAGTCTCATGTCTGCCACGTTCGCCAGTGCCTCAGCCAAAGCACAAACTCCCGCACAGCTGCCTCTGCCCTGGACATGGTG--CTCTGCC------TCCTCAGAGTCATCTGATGTGACCACTTGAGGCTCCTTGGGAATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGGAG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 57111 227 + 372756 TGTGTACATGCCCCAGGCCCCCCAGGAAGAGAACTGTGGGGCCGTTTTGGGGGCACACAGGACAGAGTCTCATGTCTGCCATGTTCACCAGTGCCTCAGCCAAAGCACAAACTCCTGCACAGCTGCCTCTACCTTGGACGTGGTG--CTCTGCC------TCCTCAGAGTCGTCTGAGGTGCTCACTTAAGGCTACTTGGGGATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293200 227 + 16356641 tgtgtacatgCCCCAGGCCCCCCAGGAACAGAACTGTGGGGCAGTTTTGGGGGCACACAGGACAGGGTCTCATGTCTGCCATGTTCACCAGTGCCTCAGCCAAAGCACAAACTCCTGCATGGCTGCCTCTGCCTTGGGCACAGTG--CTCTGCC------TCCTCAGAGTCGTCTGAGATGCCCACTTAAGGCTACTTGAGGATT-------CATTTGTGGAGATGC-TAGTCCTGTTTGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162543 227 + 1231380 TGTGTACATGCCCCAGGCCCCTCAGGAACAGAACTGTGGGGCAGTTTTGGGGGCACATAGGACAGAGTCTCATGTCTGCCATGTTCACTGGTGCCTCAGCCAATGCACAAACTCCTGCACAGCTGCCTCTTCCTTGGACATGGTG--CTCTGCC------TCCTCAGAGTTGTCTGAGGTGCCCACTTAAGGCTACTTGGGGATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2694813 227 + 11732439 TGTGTGCATGCCCCAGGCCCCCCGGGAACTGAACTGCGGGGCAGTTTTAGGGGCACACAGGACAGAGTCTCACGTCTGCCACGTTCACCAGTGCCTCAGCCAAAGCACAAACTGCTGCACAGCTGCCTCTGCCTTGGACGTGGCG--CTCTGCC------TCCTCAGAGTCGTCTGAGGTACCCACTTAAGGCTACTTGGGGATT-------CATTTGTGGAGATGC-TGGTCCTGTCTGGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22856581 174 + 22939663 TGTGCACATGCCC---------CAGGGTCAGTGCTGAGTGGCA-CTTTGGGGACACACC------AGTCGCACGTGTG-CACATT-GCCAGAGCCTCCACCATGGCTCTAGCTCCTGCATGGCTG-TTCTGTCTTAGCCACAGG-----CTGCT------CCC-----------------------------CTCTCTAGGGATC-------CTTTTGTGGGGATGC-TGGTCC--ACAAGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803091 156 + 182113224 TATGAATATGCTTC--------------------------------TTGG---CACACAAGACAC-------------TTACACTCAA-AGCGCCTCATCCAAGGTGCAAAC--------AGCTGCCTAT-CCTTAGCCACAGTGTATTCTGCCCTTCTTTCTCCTAAGACATCTGATACAGTCA--GGAAAATTATTCAGTCTT-------AGTGTGTAGAG-------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616613 187 + 47698779 -----------TGGGGGCCTCCCAGGGGCAGAGCCGGGAGGTCGTTTTTGGG-CATGCAGGACAGAGTCTGATGTGTGCTGCTGTCACCAGCGCTCTGGCCGGGCTGCAGACACCCACA-GGCTGCCCCTGC---------------CTTGTCC------TCCCCAAAGGCATCTGGCCCCACCCTTTGGGATTGCTCAGAGATT-------TGTCTG-AGAGGTGC-TG------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 255639 194 - 397369 -GTGC---TGCCCTGGGGCCTCCGAGGGCTGGAGCTGAGGGCACTTCTGGG------------AGGGCCCCAGGAGCG--------GCC--TGTCTGGGCCTCTTCACAAACCACCACGT-GCTGCCCC-GCCTCGG---CACTG--CCCTGCC------TGCTC-----CTCTTGAGGTGTTGACCTG----TCCCTGAGACCGGCCGTGACACACGTGGAGATGTGCGGTCCTG-CTGGAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1868968 311 - 2029793 I e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e micMur3.chr18 56874665 984 + 57149010 I a score=1584495.000000 s hg38.chr20_KI270870v1_alt 122607 150 + 183433 AGAGCAGACTGCACCAGCCAAGGACCACGGACGTCCAGGAAGCACCATGAGCCACTAATCCTTGGCCGTCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGA-AGA--------GGG-TGGGTGCAGGC----TTTGCTCCCCAGAGTGCT s panTro5.chr20 66448731 150 + 66533130 AGAGCAGACTGCACCAGCCAAGGACCACGGACGTCCAGGAAGCACCATGAGCCACTAATCCTTGGCCGTCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGA-AGA--------GGG-TGGGTGCAGGC----TTTGCTCCCCAGAGTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62123877 150 + 62195757 AGAGCAGACTGCACCAGCCAAGGACCACGGACGTCCAGGAAGCACCATGAGCCACTAATCCTTGGCCGTCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGA-AGA--------GGG-TGGGTGCAGGC----TTTGCTCCCCAGAGTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513051 150 - 578057 AGAGCAGACTGCACCAGCCAAGGACCATGGACGTCCAGGAAGCACCATGAGCCACTAATCCTTGGCCGTCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGA-AGA--------GGG-TGGGTGCAGGC----TTTGCTCCCCAGAGTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035042 149 - 110113093 AGAGCAGACTGCACCAGCCAAGGACCACGGATGTCCAGG-AGCACCATGAGCCACTAATCCTTGGCCGTCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGA-AGA--------GGG-TGGGTGCAGGC----TTTGCTCCCCAGAGTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768127 152 - 92844088 GGAGTAGACTGCACCAGCCGAGGACCACGGACGTCCAGGAAGCACCATGAGCCACTAACCCTTGGCCATCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGACCCCCA-----------AGTCAAGGA-GGG-------GGGG-TGGGTGCAGGC----TTTGCTCCCCCGAGTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96434774 151 + 96509753 GGAGTAGACTGCACCAGCCGAGGACCACGGACGTCCAGGAAGCACCATGAGCCACTAACCCTTGGCCATCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGA-GGG-------GGGG-TGGGTGGAGGC----TTTGCTCCCCCGAGTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16905719 152 - 16982598 GGAGTAGACTGCACCAGCCGAGGACCACGGACGTCCAGGAAGCACCATGAGCCACTAACCCTTGGCCATCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGAGGGG-------GGGG-TGGGTGCAGGC----TTTGCTCCCCCGAGTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3708993 151 - 3785965 AGAGTAGACTGCACCAGCCGAGGACCACGGACGTCCAGGAAGCACCATGAGCCACTAACCCTTGGCCATCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGA-GGA-------GGGG-TGGGTGCAGGC----TTTGCTCCCCCGAGTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287339 150 - 90373283 AGAGTAGACTGCACCAGCCGAGGACCACGGACGTCCAGGAAGCACCATGAGCCACTAACCCTTGGCCATTCT-GCCTG-CCCCCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGA-GGA-------GGGG-TGGGTGCAGGC----TTTGCTCCCCCGAGGGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101439 151 - 179258 AGAGTAGACTGCACCAGCCGAGGACCACGGACGTCCAGGAAGCACCATGAGCCACTAACCCTTGGCCATCCT-GCCTGTCCCTCCCCGACCCCAGGGATAGA-CCCCA-----------AGTCAAGGA-GGA-------GGGG-TGGGTGCAGGC----TTTGCTCCCCCGAGTGCT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 57338 147 + 372756 AGAGCAGACTGCACCAGCCAAGGACCATGGCTGTCCAAGAAGCACCATGAGCCACTAATCCCTGGTTGTCCT-GCCTCTCCCTCCCCGACCCCAGAGATAGA-CCCCA-----------AGTCAAGGA-AGA-------GGGG-CGGGTGCAGGC----CTTGCTCCCCAGAG---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293427 134 + 16356641 AGAGCAGACTGCACCAGCCAAGGACCATAGCTGTCCAAGAAGC---------------TCCATGGTTGTCCT-GCCTCTCCCTCCCAGACCC--AAGACAGA-CCCCA-----------AGGCAAGGA-AGA-------GGGG-CGGGTGCAGCC----CTTGCTCCCCAGAGTGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162770 152 + 1231380 AGAGCAGACTGCGCCAGCCAAGGACCATGGACGTCCAAGAAGCTCCATGAGCCACTAATCCCTGGTTGTCTT-GCCTCTCCCTCCCCGACCCCAGAGATAGA-CCCCA-----------AGTCAAGGA-AGA-------GGGGACGGGTGCAGGC----CTTGCTCTCCAGAGTGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2695040 150 + 11732439 AGAGCCGACTGCACCAGCCAAGGACCATGGCCGTCCAAGAAGCACCATGAACCACAAATCCCTGGTTGTCCT-GCCTCTCCCTCCCCGACCCCAGAGATAGA-CCCCA-----------AGTCAAGGA-AGA-------GGGG-CAGGTGCAGGC----CGTGCTC-CCAGAGTGCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1869279 148 - 2029793 AGAGCAGACTGCACCAGACAAGGGCCACAGCCGTCCTGGAAGCACCATGAGCCCCTGATCCCTGGCTGTCCT-GCCTG--CCTCCCCTACCCCAGGGACAGA-CCCCA-----------AGCCAGGGG-AGA--------GGG-TGGGTGCAGGC----CTTGGTCCCCAGTGTGCT i proCoq1.NW_012150197v1 I 311 I 496 s otoGar3.GL873542 22856755 143 + 22939663 AGAGCAGACTGTACCAGCCAGGGGCTGTGGCTGTCCAGGAAGCACCACGAGCCACTGACCCCTGGCTGT-----CTTA--ACTCTCCCGCCCCAGGGATAGC-CCCTA-----------AGCCAAGGG-ACA--------GGG-ATCATGTGGGC----CTT-GTTTCCAGAATGCC i otoGar3.GL873542 C 0 I 6 s mm10.chr2 181803247 146 + 182113224 ATAGTAGACTACACTAGTTGAGGACCTCA-CTATACAGGGAGCACC----------------TAGTTGTTCT----TATGTCTCCCACATC---AGGATGGA-TTCTATTCTGGGGCAGAGGAAAGGA-AGGCAGAGGAAAGA-AGGGCAGAGGA----CTTGCTCCTCTGAGTGCT i mm10.chr2 C 0 I 5 s canFam3.chr24 47616800 127 + 47698779 --------------------AGGGCTGCTGCTGCCCAA-AAGCACCAGCAGCGGCTCCTTCCCAGCCGTCCTTGCCTACACCTC----ACCCCAAGAAGGGG-CCCTA-----------AACCAGGGG-AGA-------AGAG-TGGGTACGTGT----GGTGCCCCTCAGAGCGTT i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 255833 127 - 397369 AGCGCAGACTCCACTAACCTAGGGCCACCACTGTCCAGGCAGC--TGTGGGCTGCTGGCCCCTGCCTGTCCC-GCCTC----------ACCCCAG---TGGA-CC--------------GACCAAGGC-CGA--------GGG-ACAGTGCAGGTAGCACTTGCTCCT--------- i dasNov3.JH569290 C 0 C 0 e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e micMur3.chr18 56874665 984 + 57149010 I a score=370932.000000 s hg38.chr20_KI270870v1_alt 122757 63 + 183433 TTGTGGCCCCTGAGGTTCTGAGATCACAGTAGGTGTGTGT--GAACATGT-GGGAGCGTGTGTG------------------------------------------------------------------------------------------------TG s panTro5.chr20 66448881 159 + 66533130 TTGTGGCCCCTGAGGTTCTGAGATCACAGTAGGTGTGTGT--GAACATGT-GGGAGCGTGTGTGCGCATGTTCACACGCCTGTTTGTGTTTGCATATGTGCGGGTATGTTTACATGTGCGTGCAAGTCCATGTGTATGTGAACACGTGGGAGCGTGTGTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124027 63 + 62195757 TTGTGGCCCCTGAGGTTCTGAGATCACAGTAGGTGTGTGT--GAACATGT-GGGAGCGTGTGTG------------------------------------------------------------------------------------------------TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513201 61 - 578057 TTGTGGCCCCTGAGGTTCTGAGATCACAGTAGGTGTGTGT--GAACACGT-GGGAGCGTGTGTG-------------------------------------------------------------------------------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035191 61 - 110113093 TTGTGGCCCCTGAGGTTCTGAGATCGCAGTAGGTGTGTGT--GAACATGT-GGGAGCATGTGTG-------------------------------------------------------------------------------------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768279 48 - 92844088 TTGTGGCCCCTGAGGTTCTGAGATTGCAGTAGGTGTGTGT--GAGCATGT---------------------------------------------------------------------------------------------------------------- i rheMac8.chr10 C 0 I 19 s macFas5.chr10 96434925 48 + 96509753 TTGTGGCCCCTGAGGTTCTGAGATTGCAGTAGgtgtgtgt--gagcgtgt---------------------------------------------------------------------------------------------------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16905871 48 - 16982598 TTGTGGCCCCTGAGGTTCTGAGATTGCAGTAGgtgtgtgt--gagcgtgt---------------------------------------------------------------------------------------------------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709144 49 - 3785965 TTGTGGCCCCTGAGGTTCTGAGATTGCAGTAGgtgtgtgt--gagcgtgtg--------------------------------------------------------------------------------------------------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287489 48 - 90373283 TTGTGGCCCCTGAGGTTCTGAGATTGCAGTAGgtgtgtgt--gagtgtgt---------------------------------------------------------------------------------------------------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101590 48 - 179258 TTGTGGCCCCTGAGGTTCTGAGATTGCAGTAGgtgtgtgt--gagcgtgt---------------------------------------------------------------------------------------------------------------- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 57485 31 + 372756 -TGTGGCCCTGGAGGTTCTGAGATAGCAGTAG---------------------------------------------------------------------------------------------------------------------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293561 63 + 16356641 TTGTGGCCCCGGAGGTTCTGAGATAGCAGTAGGCgtgtgt--gagcgcgt-gtgagcgtgtgtgag------------------------------------------------------------------------------------------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1162922 63 + 1231380 TTGTGGCCCCAGAGGTTCTGAGATAGCAGTAGGCgtgtgt--gagcatgt-gggagcgtgtgtgtg------------------------------------------------------------------------------------------------ i cebCap1.NW_016107870v1 C 0 I 4 s aotNan1.NW_018500483v1 2695190 63 + 11732439 CTGTGGCCCCGGAGGTTCTGAGATAGCAGTAGgcgtgtgt--gagcgtgt-gtgagcgtgtgtgag------------------------------------------------------------------------------------------------ i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22856904 49 + 22939663 CTGTGGCCCCTGAGGTTGTAAGACAGCAGTAGACATGTGC--GCACATAT-G-------------------------------------------------------------------------------------------------------------- i otoGar3.GL873542 I 6 C 0 s mm10.chr2 181803398 55 + 182113224 CTGTGGGTACTAAGCATTGGAGACAACAGCAGGCATAGGT----ACCTGT-AGGGATATG------------------------------------------------------------------------------------------------------ i mm10.chr2 I 5 C 0 s canFam3.chr24 47616933 41 + 47698779 TTGTGGCCCCAGCGGTCCCGAGGCAGCAGGAGGCACGCGT--G----------------------------------------------------------------------------------------------------------------------- i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 255960 65 - 397369 TTGTGACCTCTGAGCTTCTGAGACAGCTGGAAGCATGTGTTCGCACATGT-CTCTACAtgtatgtg------------------------------------------------------------------------------------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1869427 496 - 2029793 I e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e micMur3.chr18 56874665 984 + 57149010 I a score=1314.000000 s hg38.chr20_KI270870v1_alt 122820 1 + 183433 C s panTro5.chr20 66449040 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124090 1 + 62195757 C i panPan2.chr20 C 0 C 0 s saiBol1.JH378156 16293624 1 + 16356641 c i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2695253 1 + 11732439 c i aotNan1.NW_018500483v1 C 0 I 30 s mm10.chr2 181803453 1 + 182113224 C i mm10.chr2 C 0 C 0 s dasNov3.JH569290 256025 1 - 397369 t i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1869427 496 - 2029793 I e canFam3.chr24 47616974 0 + 47698779 C e cerAty1.NW_012001373v1 3709193 0 - 3785965 C e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e chlSab2.chr2 90287537 0 - 90373283 C e micMur3.chr18 56874665 984 + 57149010 I e gorGor5.CYUI01015848v1 513262 0 - 578057 C e manLeu1.NW_012101652v1 101638 0 - 179258 C e macNem1.NW_012014244v1 16905919 0 - 16982598 C e cebCap1.NW_016107870v1 1162985 4 + 1231380 I e calJac3.chrUn_GL286459 57516 0 + 372756 C e nomLeu3.chr13 110035252 0 - 110113093 C e rheMac8.chr10 92768327 19 - 92844088 I e otoGar3.GL873542 22856953 0 + 22939663 C e macFas5.chr10 96434973 0 + 96509753 C a score=4985.000000 s hg38.chr20_KI270870v1_alt 122821 4 + 183433 ATGT s panTro5.chr20 66449041 4 + 66533130 ATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124091 4 + 62195757 ATGT i panPan2.chr20 C 0 C 0 s aotNan1.NW_018500483v1 2695284 4 + 11732439 ATGT i aotNan1.NW_018500483v1 I 30 C 0 s mm10.chr2 181803454 4 + 182113224 ATGT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 256026 4 - 397369 gtgt i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1869427 496 - 2029793 I e canFam3.chr24 47616974 0 + 47698779 C e cerAty1.NW_012001373v1 3709193 0 - 3785965 C e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e chlSab2.chr2 90287537 0 - 90373283 C e micMur3.chr18 56874665 984 + 57149010 I e gorGor5.CYUI01015848v1 513262 0 - 578057 C e manLeu1.NW_012101652v1 101638 0 - 179258 C e saiBol1.JH378156 16293625 0 + 16356641 C e macNem1.NW_012014244v1 16905919 0 - 16982598 C e cebCap1.NW_016107870v1 1162985 4 + 1231380 I e calJac3.chrUn_GL286459 57516 0 + 372756 C e nomLeu3.chr13 110035252 0 - 110113093 C e rheMac8.chr10 92768327 19 - 92844088 I e otoGar3.GL873542 22856953 0 + 22939663 C e macFas5.chr10 96434973 0 + 96509753 C a score=16493.000000 s hg38.chr20_KI270870v1_alt 122825 58 + 183433 TCACACGC-CTGTTTGTGTTTGCATATGTGCGGGTATGTTTACATGTGCGTGCAAGTCC-- s panTro5.chr20 66449045 58 + 66533130 TCACACGC-CTGTTTGTGTTTGCATATGTGCGGGTATGTTTACATGTGCGTGCAAGTCC-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124095 58 + 62195757 TCACACGC-CTGTTTGTGTTTGCATATGTGCGGGTATGTTTACATGTGCGTGCAAGTCC-- i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92768346 58 - 92844088 TCACACGC-CTGTTTGTGTTTTCATATGTGCCAGTATGTTTACATGTGCGTGTGAGTCC-- i rheMac8.chr10 I 19 C 0 s calJac3.chrUn_GL286459 57516 26 + 372756 ---------------------------gtgtgagcatgtgtgagtgtgtggga-------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293625 28 + 16356641 -------------------------gcgtgtgagcatgtatgagcatgtggga-------- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2695288 58 + 11732439 TCACATGC-CTGTTTGTGTTTGCATATGTGCGAGTATGTTTACATGTGCGTGCAAGTCC-- i aotNan1.NW_018500483v1 C 0 T 92 s otoGar3.GL873542 22856953 8 + 22939663 --------------------------TGTGTGGC--------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803458 59 + 182113224 CTGCATGCTCTGTATATATGTACACCCATATGAATAAGTTTACAAATGTGTTCTAATGC-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47616974 17 + 47698779 ------------------------------------TGCTTAGGTGCCGGTGC-------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 256030 58 - 397369 --gtgggc-aagtgtgtgtgtgcataggtgcctgtatgtctgtgtatgtgcgtgtgGGCGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1869427 496 - 2029793 I e cerAty1.NW_012001373v1 3709193 0 - 3785965 C e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e chlSab2.chr2 90287537 0 - 90373283 C e micMur3.chr18 56874665 984 + 57149010 I e gorGor5.CYUI01015848v1 513262 0 - 578057 C e manLeu1.NW_012101652v1 101638 0 - 179258 C e macNem1.NW_012014244v1 16905919 0 - 16982598 C e cebCap1.NW_016107870v1 1162985 4 + 1231380 I e nomLeu3.chr13 110035252 0 - 110113093 C e macFas5.chr10 96434973 0 + 96509753 C a score=6411.000000 s hg38.chr20_KI270870v1_alt 122883 4 + 183433 ATGT s panTro5.chr20 66449103 4 + 66533130 ATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124153 4 + 62195757 ATGT i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92768404 4 - 92844088 GTGT i rheMac8.chr10 C 0 C 0 s calJac3.chrUn_GL286459 57542 2 + 372756 --gt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293653 2 + 16356641 --gt i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22856961 4 + 22939663 ATGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803517 4 + 182113224 ATGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47616991 4 + 47698779 ACGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 256088 4 - 397369 ACAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1869427 496 - 2029793 I e cerAty1.NW_012001373v1 3709193 0 - 3785965 C e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e chlSab2.chr2 90287537 0 - 90373283 C e micMur3.chr18 56874665 984 + 57149010 I e gorGor5.CYUI01015848v1 513262 0 - 578057 C e manLeu1.NW_012101652v1 101638 0 - 179258 C e macNem1.NW_012014244v1 16905919 0 - 16982598 C e cebCap1.NW_016107870v1 1162985 4 + 1231380 I e aotNan1.NW_018500483v1 2695346 92 + 11732439 T e nomLeu3.chr13 110035252 0 - 110113093 C e macFas5.chr10 96434973 0 + 96509753 C a score=5500.000000 s hg38.chr20_KI270870v1_alt 122887 1 + 183433 G s panTro5.chr20 66449107 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124157 1 + 62195757 G i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92768408 1 - 92844088 G i rheMac8.chr10 C 0 T 82 s calJac3.chrUn_GL286459 57544 1 + 372756 g i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293655 1 + 16356641 g i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2695254 1 + 11732439 g i aotNan1.NW_018500483v1 T 92 C 0 s otoGar3.GL873542 22856965 1 + 22939663 G i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803521 1 + 182113224 G i mm10.chr2 C 0 I 2 s canFam3.chr24 47616995 1 + 47698779 G i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 256092 1 - 397369 G i dasNov3.JH569290 C 0 I 1293 e proCoq1.NW_012150197v1 1869427 496 - 2029793 I e cerAty1.NW_012001373v1 3709193 0 - 3785965 C e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e chlSab2.chr2 90287537 0 - 90373283 C e micMur3.chr18 56874665 984 + 57149010 I e gorGor5.CYUI01015848v1 513262 0 - 578057 C e manLeu1.NW_012101652v1 101638 0 - 179258 C e macNem1.NW_012014244v1 16905919 0 - 16982598 C e cebCap1.NW_016107870v1 1162985 4 + 1231380 I e nomLeu3.chr13 110035252 0 - 110113093 C e macFas5.chr10 96434973 0 + 96509753 C a score=7650.000000 s hg38.chr20_KI270870v1_alt 122888 14 + 183433 -TATGTGAACACGTG s panTro5.chr20 66449108 14 + 66533130 -TATGTGAACACGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124158 14 + 62195757 -TATGTGAACACGTG i panPan2.chr20 C 0 C 0 s calJac3.chrUn_GL286459 57545 14 + 372756 -tgtgtgagcatgtg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293656 14 + 16356641 -tgcgtgagcatgtg i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2695255 14 + 11732439 -tgtgtgagcatgtg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22856966 4 + 22939663 ---TGTG-------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803524 6 + 182113224 -TGCATG-------- i mm10.chr2 I 2 C 0 s canFam3.chr24 47616996 7 + 47698779 TCGTGTG-------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1869427 496 - 2029793 I e cerAty1.NW_012001373v1 3709193 0 - 3785965 C e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e chlSab2.chr2 90287537 0 - 90373283 C e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e gorGor5.CYUI01015848v1 513262 0 - 578057 C e manLeu1.NW_012101652v1 101638 0 - 179258 C e macNem1.NW_012014244v1 16905919 0 - 16982598 C e cebCap1.NW_016107870v1 1162985 4 + 1231380 I e nomLeu3.chr13 110035252 0 - 110113093 C e rheMac8.chr10 92768409 82 - 92844088 T e macFas5.chr10 96434973 0 + 96509753 C a score=64725.000000 s hg38.chr20_KI270870v1_alt 122902 14 + 183433 GGAGCGTGTGTGTG s panTro5.chr20 66449122 14 + 66533130 GGAGCGTGTGTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124172 14 + 62195757 GGAGCGTGTGTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513262 2 - 578057 ------------TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035252 2 - 110113093 ------------TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768327 14 - 92844088 GGAGCGTGTGTGTG i rheMac8.chr10 T 82 C 0 s macFas5.chr10 96434973 14 + 96509753 ggagcgtgtgtgtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16905919 14 - 16982598 ggagcgtgtgtgtg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709193 13 - 3785965 -gagcgtgtgtgtg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287537 14 - 90373283 ggagcgtgtgtgtg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101638 14 - 179258 ggagcgtgtgtgtg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 57559 10 + 372756 ggagcatgtg---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293670 14 + 16356641 tgaacgtgtgtgtg i saiBol1.JH378156 C 0 I 16 s aotNan1.NW_018500483v1 2695269 14 + 11732439 ggagcgtgtgtgTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22856970 13 + 22939663 GTAGTGTGTGT-TG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803530 14 + 182113224 GTATCATTGAGGGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47617003 14 + 47698779 TAGCCGTGTGTCAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1869427 496 - 2029793 I e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e cebCap1.NW_016107870v1 1162985 4 + 1231380 I a score=654722.000000 s hg38.chr20_KI270870v1_alt 122916 108 + 183433 CATGTTCACACGCCTGTTTGTGTTCGCATATGTGCGAGTATGTTTACATGTGCGTGCAAGTCCATGTGTGTGTGCATGTGTAAATTTGGCTCT-AAT----CAATAAGGATCT s panTro5.chr20 66449136 108 + 66533130 CATGTTCACACGCCTGTTTGTGTTTGCATATGTGCGGGTATGTTTACATGTGCGTGCAAGTCCATGTGTGTGTGCACGTGTAGATTTGGCTCT-CAT----CAATAAGGATCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124186 108 + 62195757 CATGTTCACACGCCTGTTTGTGTTTGCATATGTGCGGGTATGTTTACATGTGCGTGCAAGTCCATGTGTGTGTGCACGTGTAGATTTGGCTCT-CAT----CAATAAGGATCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513264 108 - 578057 CATGTTCACACGCCTGTTTGTGTTTGCATATGTGCGAGTATGTTTACATGTGCGTGCAAGTCCATGTGTGTGTGCACGTGTAGATTTGGCTCT-CAT----CAATAAGGATCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035254 108 - 110113093 CATGTTCACACGCCtgtttgtgtttgcatatgtgcgagtatgtttacatgtgcgtgcaagtccatgtgtgtgtgcatgtgtaGATTTGGCTCT-CAT----CAATAAGGATCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768341 93 - 92844088 CCTGTTCACACGCCTGTTTGTGTTTTCATATGTGCCAGTATGTTTACATGTGCGTGTGAGTCCGTGT---------------GATTTGGCTTT-CGT----CACTAAGGATCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96434987 93 + 96509753 cctgttcacacgcctgtttgtgtttgcatatgtgccagtatgtttacatgtgcgtgtgagtccgtgt---------------gATTTGGCTTT-CAT----CACTAAGGATCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16905933 108 - 16982598 cctgttcacacgcctgtttgtgtttgcatatgtgccagtatgtttacatgtgtgtgtgagtccgtgtgtgtgtgCACGTGTAGATTTGGCTTT-CAT----CACTAAGGATCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709206 108 - 3785965 cctgttcacacgcctgtttgtgtttgcgtatgtgccagtatgtttacacgtgcgtgtgagtccgtgtgtgtgtgCACGTGTAGATTTGGCTTT-CAT----CACTAAGGATCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287551 108 - 90373283 cctgttcacatgcctgtttgtgtttgcatatgtgccagtatgtttacatgagcgtgtgagtccatgtgtgtgtgCACGTGTAGATTTGGCTTT-CAT----CACTAAGGATCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101652 108 - 179258 cctgttcacacgcctgtttgtgtttgcatatgtgccagtatgtttacacgtgcgtgtgagtccgtgtgtgtgtgCACGTGTAGATTTGGCTTT-CAT----CACTAAGGATCT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 57569 60 + 372756 ------------------------------agtgcaagtctgtgt------------------gtgtgtgtgtgcatgtgtATATTTGGCTCT-CAT----CACTAAGGACCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293700 113 + 16356641 CATGTTCACATTACtgtttgtgtttgcatatgtgcaagtatgtttacatgtgcgtgcaagtccgtgtgtgtgtgcacctgtatatttgtgtatatattgtgCACAAAGGATCA i saiBol1.JH378156 I 16 C 0 s cebCap1.NW_016107870v1 1162989 108 + 1231380 catgttcacatgcctgtttgtgtttgcatatgtgcaagtgtgtttatatgtgcgtgcaagtccgtgtgtgtgtgCACGTGTATATTTGGCTCT-CGT----CACTAAGGACCA i cebCap1.NW_016107870v1 I 4 C 0 s aotNan1.NW_018500483v1 2695283 108 + 11732439 CATGTTCACATGCCTGTTTGTGTTTGCATATGTGCGAGTATGTTTACATGTGCGTGCAAGTCCGCGCATGTGTGCACGTGTATATTTGGCTCT-CAT----CACTAAGGACCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22856983 80 + 22939663 --------CATGCCTGCTTGTT----------------TGTGTATACACATGCTAGCA---CCTCATATAT-TGGATATCTAGACATGGCTCT-CAT----CAAGTGGGGACT i otoGar3.GL873542 C 0 I 11 s mm10.chr2 181803544 23 + 182113224 CCTTCTGACA------------------------------------------------------------------------------------GAA----CAACCAGGAC-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47617017 25 + 47698779 -----------------------CAGCAGAAGCGCT------TCTGAACGGCCG----------------------------------------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1869427 496 - 2029793 I e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=526101.000000 s hg38.chr20_KI270870v1_alt 123024 47 + 183433 TTCAGAATGTGTCCCATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG s panTro5.chr20 66449244 47 + 66533130 TTCAGAATGTGTCCCCTTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124294 47 + 62195757 TTCAGAATGTGTCCCCTTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513372 47 - 578057 TTCAGAATGTGTCCCATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035362 47 - 110113093 TTCAGAATGTGTCCCATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768434 47 - 92844088 TTCAGAATGCATCCCATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96435080 47 + 96509753 TTCAGAATGCATCCCATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16906041 47 - 16982598 TTCAGAATGCATCCCATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709314 47 - 3785965 TTCAGAATGCATCCCATTAGTGTCCCCTCCTTCCATGTGACTCTGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287659 47 - 90373283 TTCAGAATGCATCCCATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101760 47 - 179258 TTCAGAATGCATCCCATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 57629 47 + 372756 TTCAGAATGTGTCTGATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293813 47 + 16356641 TTCAGAATATGTCCGATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1163097 47 + 1231380 TTCAGAATGTGTCCGATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2695391 47 + 11732439 TTCAGAATGTGTCCGATTAGTGTCCCCTCCTTCCATGTGGCTCTAAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1869923 47 - 2029793 TTCAGAATGCATCCGATCAGTGTCCCCTCCTTCCACGTGACCCTGGG i proCoq1.NW_012150197v1 I 496 C 0 s otoGar3.GL873542 22857074 38 + 22939663 TTCAGCATGTATCCAATCAGTGTTCCCTCC---------ACCTTGGG i otoGar3.GL873542 I 11 C 0 s mm10.chr2 181803567 38 + 182113224 ----AAATTTGCC----TAGTG-CCTCTCCATACAGGTAACCTTGGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47617042 46 + 47698779 TCCAGCACACATCTGCTTGGCACTGCCACCACCCGTATGAC-CTGTG i canFam3.chr24 C 0 C 0 e colAng1.NW_012114444v1 5576064 1505 - 5823884 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=822937.000000 s hg38.chr20_KI270870v1_alt 123071 75 + 183433 AAGTAAGTGCCACAAATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAA s panTro5.chr20 66449291 75 + 66533130 AAGTAAGTGCCACAAATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124341 75 + 62195757 AAGTAAGTGCCACAAATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513419 75 - 578057 AAGTAAGTGCCACAAATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035409 75 - 110113093 AAGTAAGTGCCACAAATAAGGCCAGAGGCTCAGGGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768481 75 - 92844088 AAGTAAGTGCCACAGATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96435127 75 + 96509753 AAGTAAGTGCCACAGATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16906088 75 - 16982598 AAGTAAGTGCCACAGATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709361 75 - 3785965 AAGTAAGTACCACAGATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCCGCCTGGCTTCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287706 75 - 90373283 AAGTAAGTGCCACAGATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101807 75 - 179258 AAGTAAGTGCCACAGATAAGGCCAGAGGCTCAGAGAGTTGCCCAAGGCCACCCTGCCCATCCTGCCTGGCTTCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5577569 75 - 5823884 aaGTAAGTGCCACAGATAAGGCCAGAGGCTCAGAGAGTTGCCTAAGGCCACCCTGCCCATCCTGCCTGGCTTCCA i colAng1.NW_012114444v1 I 1505 C 0 s calJac3.chrUn_GL286459 57676 61 + 372756 AA-TAAGT------------GCCAGAGGTTCAGAGACTTGCCCAAGGCCAGTCTGCCCAGCCTGCCT-GCTTCAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293860 63 + 16356641 AAGTAAGT------------GGCAGAGGCTCAGAGACTTGCTCAAGGCCACCCTGCCCAGCCTTCCTGGCTTCAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1163144 63 + 1231380 AAGTAAGT------------GCCAGAGGCTCAGAGACTTGCCCGAGGCCACCCTGCCCAGCCTGCCTGGCTTCAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2695438 63 + 11732439 AAGTAAGT------------GCCAGAGGCTCAGAGACTTGCCCAAGGCCACCCTGCCCAGCCTGCCTGGCTTCAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1869970 74 - 2029793 AAGTGCATGCTACAAATAA-CCCAAAGACGGAGAGACTTGCCCAAGGCCACCCTACCCAGCCTGCCTGGCTTCAA i proCoq1.NW_012150197v1 C 0 I 85 s otoGar3.GL873542 22857112 48 + 22939663 AAGTGCATGTTACAGA--------------------------CAAGGCC-CCCTGCCCAGCCTGCCTTGCTGCAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803605 62 + 182113224 AAGTGAGTGTTATAAATAAGGCCAGAAGTTTGG------GCTCATG-------TTCCTGGATGGCCTGCCTTAAA i mm10.chr2 C 0 I 22 s canFam3.chr24 47617088 60 + 47698779 AAGCGGGTGCCACAACTGAGGCCAGA-CCTCAGA-ACTCGCCTGGGGCCA-------------GCCCGGCTTCAG i canFam3.chr24 C 0 C 0 e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=520587.000000 s hg38.chr20_KI270870v1_alt 123146 74 + 183433 AGTCTCTCCTCTA----TGGAGCTGAGTCCTTGGACC-ACGGTACCCACTGTCGAAGAGGACACTTCC-------------ACTGCTCCTGT s panTro5.chr20 66449366 74 + 66533130 AGTCTCTCCTCTA----TGGAGCTGAGTCCTTGGACC-ATGGTAGCCACTGTCGAAGAGGACACTTCC-------------ACTGCTCCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124416 74 + 62195757 AGTCTCTCCTCTA----TGGAGCTGAGTCCTTGGACC-ATGGTAGCCACTGTCGAAGAGGACACTTCC-------------ACTGCTCCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513494 74 - 578057 AGTCTCTCCTCTA----TGGAGCTGAGTCCTTGGACC-ATGGTACCCACTGTCGAAGAGGACACTTCC-------------ACTGCTCCTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035484 74 - 110113093 AGTCTGTCCTCTG----TGGGGCTGAGTCCTTGGACC-ATGGTACCCACTGTCGAAGAGGACACTTCC-------------ACTGCTCCTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768556 74 - 92844088 AGTCTCTCCTCTG----TGGGGCTGAGTCCTTGGACC-GTGGTACCCACTGTTGAAGAGGACACTTCC-------------ACTGCTCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96435202 74 + 96509753 AGTCTCTCCCCTG----TGGGGCTGAGTCCTTGGACC-GTGGTACCCACTGTTGAAGAGGACACTTCC-------------ACTGCTCCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16906163 74 - 16982598 AGTCTCTCCTCTG----TGGGGCTGAGTCCTTGGACC-ATGGTACCCACTGTTGAAGAGGACACTTCC-------------ACTGCTCCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709436 72 - 3785965 AA--TCTCCTCTG----TGGGGCTGAGTCCTTGGACC-GTGGTACCCACTGTTGAAGAGGACACTTCC-------------ATTGCTCCTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287781 74 - 90373283 AGTCTCTCCTCTG----TGGGGCTGAGTCCTTGGACC-GTGGTACCCACTGTTGAAGAGGACACTTCC-------------ACTGCTCCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101882 74 - 179258 AATCTCTCCTCTG----TGGGGCTGAGTCCTTGGACC-GTGGTACCCACTGTTGAAGAGGACACTTCC-------------ACTACTCCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5577644 74 - 5823884 AGTCTCTCCTCTG----TGGGGCTGAGTCCTTGGACC-GTGGTACCCACTGTTGAAGAGGACACTTCC-------------ACTGCTCCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 57737 78 + 372756 AGTGTCCCCT------------CTGAGTCCTTGGACCTGAGGTACTCAGTGTCAAAGAGGACACTTCCACCTGCTCCTTCGAC--CTGCTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16293923 65 + 16356641 AGTGTCCCCT------------CTGAGTCCTTGGACCTGAGGCACTCAGTGTCGAAGAGGACACTTCC-------------AC--CTGCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1163207 65 + 1231380 AGTGTCCCCT------------CTGAGTCCTTGGACCTGAGGCACTCAGTGTCGAAGAGGACACTTCC-------------AC--CTGCTCC i cebCap1.NW_016107870v1 C 0 I 22 s aotNan1.NW_018500483v1 2695501 78 + 11732439 AGTGTCCCCT------------CTGAGTCCTTGGGCCTGAGGTACTCAGTGTCAAAGAGGACCCTTCCACCTGCTCCTTTGAC--CTGCTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22857160 54 + 22939663 GGTCCCCACTCAA----TGGGGCTGAGTCCCTGGACC-----------------ACGAGGCTACTACT-------------AC----CCAGA i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181803689 64 + 182113224 AGTCTCCTTC-------TGGGGTTGGA-----GGTTC-ATTCAAGTCACTGACTGAGAGTATAATGTC-------------ACTTTTGAT-- i mm10.chr2 I 22 C 0 s canFam3.chr24 47617148 47 + 47698779 AGTTTTCGTCTTGACCAGTGGGGTGATTCCC--ACCC-ATCGTCCCCGCT------------------------------------------ i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870044 85 - 2029793 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=64117.000000 s hg38.chr20_KI270870v1_alt 123220 8 + 183433 CTTCACCT s panTro5.chr20 66449440 8 + 66533130 CTTCACCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124490 8 + 62195757 CTTCACCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513568 8 - 578057 CTTCACCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035558 8 - 110113093 CGTCACCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768630 8 - 92844088 CTTCACCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96435276 8 + 96509753 CTTCACCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16906237 8 - 16982598 CTTCACCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709508 8 - 3785965 CTTCACCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287855 8 - 90373283 CTTCACCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101956 8 - 179258 CTTCACCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5577718 8 - 5823884 CTTCACCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 57815 8 + 372756 CCTCACCC i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16293988 8 + 16356641 CCTCATCC i saiBol1.JH378156 C 0 I 1 s aotNan1.NW_018500483v1 2695579 8 + 11732439 CCTCACCC i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22857216 4 + 22939663 ----ACCT i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181803753 7 + 182113224 CTTCACT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47617195 2 + 47698779 ---CA--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870044 85 - 2029793 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e cebCap1.NW_016107870v1 1163272 22 + 1231380 I a score=218203.000000 s hg38.chr20_KI270870v1_alt 123228 25 + 183433 GCAG-ACACCCTGCTCCCCACTCCCG s panTro5.chr20 66449448 25 + 66533130 GCAG-ACACCCTGCTCCCCACTCCCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124498 25 + 62195757 GCAG-ACACCCTGCTCCCCACTCCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513576 25 - 578057 GCAG-ACACCCTGCTCCCCACTCCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035566 25 - 110113093 GCAG-ACACCCTGCTCCCCCCTTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768638 25 - 92844088 GCAG-ACACACTGCTCCCCCATTTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96435284 25 + 96509753 GCAG-ACACCCTGCTCCCCCATTTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16906245 25 - 16982598 GCAG-ACACACTGCTCCCCCATTTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709516 25 - 3785965 GCAG-ACACACTGCTCCCCCATTCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287863 25 - 90373283 GCAG-ACACACTGCTCCCCCATTCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101964 25 - 179258 GCAG-AGACACTGCTCCCCCATTCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5577726 25 - 5823884 GCAG-ACACACTGCTCCCCCATTCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 57824 23 + 372756 GCAG-ACA--TTGCTCCCCACTTCCC i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16293997 14 + 16356641 ------------GCTCCCCACGTCCC i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1163294 25 + 1231380 GCAG-ACACCCTGCTCCCCACTTCCC i cebCap1.NW_016107870v1 I 22 C 0 s aotNan1.NW_018500483v1 2695588 25 + 11732439 GCAG-ACACCCTGCTCCCCGCTTCCC i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22857220 22 + 22939663 ---G-CCACTTTGCTCCTCACTTCTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803760 25 + 182113224 -CAGTATACACAGTTCTTCATTTTCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47617197 25 + 47698779 GTGG-ACCCTCTGCTTCCTGTTTCTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870044 85 - 2029793 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=2836515.000000 s hg38.chr20_KI270870v1_alt 123253 248 + 183433 TGAGGAACTAGAACTCACACACAGCTCCTCCTCCCCAGCTCTCAGACCCCTGTTCCATATCTGTCTCACCAGACAAGAGTGTAGGA------GACCCCGGCT--------GGGGTGAGCG-TGAATGACTGCATAGCCCCTTCCA-CT--------GTC--------------CGCCTCCTTTCGGGGCCCACCTGACCCCG---GCCCTTCCTGGCACATAAT---------------------------------------------------------------------------TGGCAAAGTTCCAGCCAGATGATCTTCGCTGCTCA-CCTTGGCTGTGTCATGCCCAGGCCCTTCCC s panTro5.chr20 66449473 248 + 66533130 TGAGGAACTAGAACTCACACACAGCTCCTCCTCCCCAGCTCTCAGACCCCTGTTCCATATCTGTCTCACCAGACAAGAGTGTAGGA------GACCCCGGCT--------GGGGTGAGTG-TGAGTGACTGCATAGCCCCTTCCA-CT--------GTC--------------CGCCTCCTTTCGGGGCCCACCTGACCCCG---GCCCTTCCTGGCACATCAT---------------------------------------------------------------------------TGGCAAAGTCCCAGCCAGATGATCTTCGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124523 248 + 62195757 TGAGGAACTAGAACTCACACACAGCTCCTCCTCCCCAGCTCTCAGACCCCTGTTCCATATCTGTCTCACCAGACAAGAGTGTAGGA------GACCCCGGCT--------GGGGTGAGTG-TGAGTGACTGCATAGCCCCTTCCA-CT--------GTC--------------CGCCTCCTTTCGGGGCCCACCTGACCCCG---GCCCTTCCTGGCACATCAT---------------------------------------------------------------------------TGGCAAAGTCCCAGCCAGATGATCTTCGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513601 248 - 578057 TGAGGAACTAGAACTCACACACGGCTCCTCCTCCCCAGCTCTCAGACCCCTGTTCCATATCTGTCTCACCAGACAAGAGTGTAGGA------GACCCCGGCT--------GGGGTGAGTG-TGAATGACTGCATAGCCCCTTCCA-CG--------GTC--------------CACCTCCTTTCGGGGCCCATCTGACCCCG---GCCCTTCCTGGCACATAAT---------------------------------------------------------------------------TGGCAAAGTCCCAGCCAGATGATCTTCGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035591 323 - 110113093 TGAGGAACTAGAACTCACACATAGCCCCTCCTCCCCAGCTCTCAGACCCCTGTTCCATATCTGTCTCACCGGACAAGAGTATGGGA------GACCCCGGCT--------GGGGTGAGTG-TGAATGACTGCATAGCCCCTTCCA-CT--------GTC--------------TGCCTCCTTGCGGGGCCCACCTGACCCCG---GCCCTTCCTGGCACATAATTGGCAAAGTCCCAGCCAAAGGGTCTTCGCTGCTCACCTTGGCTGTGTCATACCCAGGCCCTTCCTGGCACATAACTGGCAAAGTCCCAGCCAGAGGATCTTCGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768663 245 - 92844088 TGAGGAACTAGAACTCACACG---CTCCTCCTCCCCAGCTCTCAGACCCCTGTTCCATATCTTTCTCACCAAACAAGAGTGTAGGA------GACCCCGGCT--------GGGGTGAGTG-TGAATGACTGCATAGCCCCTTCCA-CT--------GTC--------------CGCCTCCTTTCGGGGCCCACCTGACCCCA---GCCCTTCCTGGCACGTAAT---------------------------------------------------------------------------TGGAAAAGTCCCAGCCAGATGATCTTGGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96435309 245 + 96509753 TGAGGAACTAGAACTCACACG---CTCCTCCTCCCCAGCTCTCAGACCCCTGTTCCATATCTTTCTCACCAAACAAGAGTGTAGGA------GACCCCGGCT--------GGGGTGAGTG-TGAATGACTGCATAGCCCCTTCCA-CT--------GTC--------------CGCCTCCTTTCGGGGCCCACCTGACCCCA---GCCCTTCCTGGCACGTAAT---------------------------------------------------------------------------TGGAAAAGTCCCAGCCAGATGATCTTGGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16906270 245 - 16982598 TGAGGAACTAGAACTCACACA---CTCCTCCTCCCCAGCTCTCAGACCCCTGTTCCATATCTTTCTCACCAAACAAGAGTGTAGGA------GACCCCGGCT--------GGGGTGAGTG-TGAATGACTGCATAGCCCCTTCCA-CT--------GTC--------------CGCCTCCTTTCGGGGCCCACCCGACCCCA---GCCCTTCCTGGCACGTAAT---------------------------------------------------------------------------TGGAAAAGTCCCAGCCAGATGATCTTGGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709541 245 - 3785965 TGAGGAACTAGAACTCACACA---CTCCTCCTCCCCAGCTCTCAGACCCCTGTTTCGTATCTTTCTCACCAAACAAGAGTGTAGGA------GACCCTGGCT--------GGGGTGAGTG-TGAATGACTGCATAGCCCCTTCCA-CT--------GTC--------------TGCCTCTTTTCGGGGCCCACCTGACCCCA---GCCCTTCCTGGCACGTAAT---------------------------------------------------------------------------TGGAAAAGTCCCAGCCAGATGATCTTGGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90287888 243 - 90373283 TGAGGAACTAGAACTCACACA---CTCCTCCTCCCCAGCTCT--GACCCCTGTTCCATATCTTTCTCACCAAACAAGAGTGTAGGA------GACCCCAGCT--------GGGGTGAGTG-TGAATGACTGCATAGCCCCTTCCA-CT--------GTC--------------TGCCTCCTTTCGGGGCCCACCTGACCCCA---GCCCTTCCTGGCACGTAAT---------------------------------------------------------------------------TGGAAAAGTCCCAGCCAGATGATCTTGGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 101989 245 - 179258 TGAGGAACTAGAACCCACACA---CTCCTCCTCCCCAGCTCTCAGACCCCTGTTTCATATCTTTCTCACCAAACAAGAGTGTAGGA------GACCCCGGCT--------GGGGTGAGTG-TGAATGACTGCATAGCCCCTTCCA-CT--------GTC--------------TGCCTCCTTTCGGGGCCCACCTGACCCCA---GCCCTTCCTGGCACGTAAT---------------------------------------------------------------------------TGGAAGAGTCCCAGCCAGATGATCTTGGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5577751 245 - 5823884 TGAGGAACTAGAACTCACACA---TTCCTCTTCCCCAGCTCTCACACCCCTGTTCCATATCTGTCTCACCAAACAAGAGTGTAGGA------GACCCCGGCT--------GGGGTGAGTG-TGCGTGACTGCATAGCCCCTTCCA-CT--------GTC--------------CGCCTCCTTTCAGGGCCCACCTGACCCCA---GCCCTTCCTGGCACGTAAT---------------------------------------------------------------------------TGACAAAGTCCCAGCCAGATGATCTGGGCTGCTCA-CCTTGGCTGTGTCATACCCAGGCCCTTCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 57847 249 + 372756 TGAGGACCTAGAACTCATACACAGCTCCTCCTCCCCAGTTCTCAGACCCCTGTTCCATGTCTGTTTCACCAAATGAGAGTGTGGGA------GACCCTGGCT--------GGGGTGAGTG-TGAATGACTGCGTAGCCCCTTCCACCC--------GTC--------------CGCCTCCTTTTAGGGCCCACCTGACCCGG---TCCCTCCCTGGCACGTAAT---------------------------------------------------------------------------TGGCAAAGCCGTAGCCAGATGACCTTGGCTACTGG-CCCTGGCTGTGTCATACCCAGGCCCTTCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16294011 247 + 16356641 TGAGGAACTAGAACTCATACACAGCTCCACCTCCCCAGTTCTCAGACCCCTGTTCCATGTCTGTTTCACCAAACAAGAGTATGGGA------GACCCTGGCT--------GGGGTGAGTG-TGAATGACTGCGTAGCCCCTTCCA-CT--------GTC--------------CGCCTCCTTTTAGAGCCCACCTGACCTGG---CCCCTCCCTGGCACATAAT---------------------------------------------------------------------------TGGCAAAGCCCCAGCCAGATGACCTTGGCCGCTGA--CCTGGCTGTATCATCCCCAGGCCCTTCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1163319 247 + 1231380 TGAGGAGCTAGAACTCATACACAGCTCCTCCTCCCCAGCTCTCAGACCCCTGTTCCACGTCTGTTTCACCAAACGCGAGTGTGGGA------CACCCCAGCT--------GGGGTGAGTG-TG-ATCACTGAGTAGCCCCTTCCA-CC--------GTC--------------CGCCTCCTTTTAGGGCCCACCTGACCTGG---CTCCTCCCTGGCACATAAT---------------------------------------------------------------------------TGGCAAAGCCCCAGCCAGATGACCTTGGCTACTGA-CCCTGGCTGTGTCATACCCAGGCCCTTCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2695613 248 + 11732439 TGAGGAACTAGAACTCTTACACCGCTCCTCCTCCCCAGTTCTCAGGCCCCTGTTCCATGTCTGTTTCACCAAACCAGAGTGTGGGA------GACCCCGGCT--------GGGGTGAGTG-TGAATGACTGCGTAGCCCCTTCCA-CC--------GTC--------------CGCCTCGTTTTAGGGCCCACCTGCCCCGG---CCTCTCCCTGGCACATAAT---------------------------------------------------------------------------TGGCAAAGCTCCAG-CAGATGACCTTGGCTACTGACCCTTGGCTGTGTCAGACCCAGGCCCTTCCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1870129 244 - 2029793 TGAGGAACTAGAACTCACACA---CATCTCTTCTCTGGTTCTCGGACCCCTGTTCCATGTCTGTCTCCCCAAGCAAGAGTGTGGTA------GACCCTGGCA--------GGTGTGACTG-TGAATGACAGCTGAGCCCCTCCCC-CT--------GCC--------------TGCATCCTCTCAGGGCCCACCTGCACC-G---TCCCTCGCTGGCACCTGCC---------------------------------------------------------------------------TGGCAAAGTCCCAGCCGGATGATCTTGGTCGCTCA-CCTTGGCTGTGCCACACCCTGGCCCTTCCC i proCoq1.NW_012150197v1 I 85 I 1027 s otoGar3.GL873542 22857242 228 + 22939663 TGAGGAATCAGAACTCACACG---TATTTTCTCC----TTCTCAGTTCCAT-TTCTCTTCATTTCTCTCTAGACAAGAGTGTGGGA------GACCTTGGCA--------GGC-TGAATG-TGAATGACACCTTAGTCCCTCCCA-TT---------CC--------------CCCATCCTTTCAGGGCCCACCTGGCCC------------CCGGCACACGCC---------------------------------------------------------------------------TGGCAAA-TTCCAGCCAGATGATCTTGGCCACTCA-CCTTGGCTGCACTGGGGCCTGGCCATTTCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803785 209 + 182113224 TGAGAATATAGAACTCACAA----CTCCTTCTCCCTGGTTCTTAGACTCCTGTTCCATGTTTCTCTTCTCACATGC-AGTGTGGGA------GAC------------------AAGACCA-TG---TACTCAGTAAAGCCAACCA-CT--------GGCTGACATGGCACTATTGCCTCTTTATAGGACCC--CTGATCACC---ACCTTCCTT-------------------------------------------------------------------------------------T-----------------------TTGGCTACTTT-CCTTGGAAGTGCTATACCCTGGTCATTTCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47617222 235 + 47698779 TGAGGGACTAGGGTTCATAC----CATCTTCCCC----------GTCCGCAGTTCCACGTCTGCCTC-CCGCGGGGGAATGCGGGAGCCCGGGACCCTTGCTCCCTGCAGAGGCCTAGTGCTGGGCAGTGGCGTGGGTCCTG-GG-CTGGAGAGAGGCC--------------CACCTCCTTTCAGGGCTCACCCAAGCCCGCGCCCCTTCCCTGGAGTGTGCC---------------------------------------------------------------------------CGCCGAGG-CCCAACCAGAGGAACTTGCCCGCTCA-CCC-----------------GGCCC----- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=2544861.000000 s hg38.chr20_KI270870v1_alt 123501 248 + 183433 TGGTCTGCTCCAGAGTGTTCCTCTGAAGGTGCAATTCCCACACGTGGGATCTCTGGGCAG----AGCAcagaga-cttgccttcctgctctgtgggcatgcttgccatcccacacac-aggcaccttcagccctgcaggtcccagcaggctgc-tttccaccagctggctctcacaatggtttgaagctgcttttttcctctatcttatttgctgttccctccagcttcctgtcagt----tgctaattcaatcctttc s panTro5.chr20 66449721 248 + 66533130 TGGTCTGCTCCAGAGCGTTCCTCTGAAGGTGCAATTCCCACACGTGGGATCTCTGGGCAG----AGCACAGAGA-CTTGCCTTCCTGCTCTGTGGGCATGCTTGCCATCCCACACAC-GGGCACCTTCAGCCCTGCAGGTCCTAGCAGGCTGC-TTTCCACCAGCTGGCTCTCACAATGGtttgaagctgcttttttcctctatcttatttgctgttccctccagcttcctgtcagt----tgctaattcaatcctttc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62124771 248 + 62195757 TGGTCTGCTCCAGAGCGTTCCTCTGAAGGTGCAATTCCCACACGTGGGATCTCTGGGCAG----AGCACAGAGA-CTTGCCTTCCTGCTCTGTGGGCATGCTTGCCATCCCACACAC-GGGCACCTTCAGCCCTGCAGGTCCTAGCAGGCTGC-TTTCCACCAGCTGGCTCTCACAATGGtttgaagctgcttttttcctctatcttatttgctgttccctccagcttcctgtcagt----tgctaattcaatcctttc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 513849 248 - 578057 TGGTCTGCTCCAGAGCATTCTTCTGAAGGTGTAATTCCCACACGTGGGATCTCTGGGCAG----AACACAGAGA-CTTGCCTTCCTGCTCTGTGGGCATGCTTGCCATCCCACACAC-GGGCACCTTCAGCCCTGCAGGTCCCAGCAGGCTGC-TTTTCACCAGCTGGCTCTCACAATGGtttgaagctgcttttttcctctgtcttatttgctgttccctccagcttcctgtcagt----tgctaattcaatcctttc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110035914 248 - 110113093 TGGTCTGCTCCAGAGGGTTCCTCTGAAGGTGCAGTTCCCACATGTGGGATCTCCGGGCAG----AGGACAGAGA-CTTGCCTTCCTGCTCTGTGGGCATGCTTGCCATCCCACACAC-GGGCACCTTCAGCCCTGCCGGTCCCAGCAGGCTGC-TTTCCACCTGCTGGCTCTCACAATGGtttgaatctgcttttttcctctatcttatttgctgttccctccagcttcctgtcagt----tgctaattcaatcctttc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92768908 247 - 92844088 TGGCCTGCTCCAGAGGGTTCCTCTGAAGGTGCGATTCCCACACGGGGGATCTCTGGGCCG----aggacagaga-ctcgccttcctgctctatgggcatgcttgcgagcccccacac-aggcaccttcagccctgtaggtcctagcaggctgcttttccaccagctggctctcacaatggtttgaagatg--tttttcctctatcttatttgctgctccctccagcttcctgtcagt----tcctaattcaatcctttc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96435554 247 + 96509753 TGGCCTGCTCCAGAGGGTTCCTCTGAAGGTGCGATTCCCATACGGGGGATCTCTGGGCCG----AGGACAGAGA-CTCGCCTTCCTGCTCTATGGGCATGCTTGCCAGCCCCCACAC-AGGCACCTTCAGCCCTGTAGGTCCTAGCAGGCTGCTTTTCCACCAGCTGGCTCTCACAATGGTTTGAAGATG--TTTTTCCTCTATCTTATTTGCTGCTCCCTCCAGCTTCCTGTCAGT----TCCTAATTCAATCCTTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16906515 247 - 16982598 TGGCCTGCTCCAGAGGGTTCCTCTGAAGGTGCGATTCCCACACGGGGGATCTCTGGGCCG----aggacagaga-ctcgccttcctgctctatgggcatgcttgccagcccacacac-aggcaccctcagccctgtaggtcctagcaggctgcttttccaccagctggctctcacaatggtttgaagatg--tttttcctctatcttatttgctgctccctccagcttcctgtcagt----tcctaattcaatcctttc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3709786 248 - 3785965 TGGCCTGCTCCAGAGGGTTCCTCTGAAGGTGCGATTCCCACACGGGGGATCTCTGGGCCG----aggacagaga-ctcaccttcctgctctatgggcatgcttgccagcccacacac-aggcaccttcagccctgtaggtcctagcaggctgcttttccaccagctggctctcacaatggtttgaagatgc-tttttcctctatcttatttgctgttccctccagcttcctgtcagt----tgctaattcaatcctttc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90288131 248 - 90373283 TGGCCTGCTCCAGAGGGTTCCTCTGAAGGTGCGATCCCCACACGGGGGATCTCTGGGCCG----aggacagaga-ctcgccttcctgctctatgggcatgcttgccagcccacacac-aggcaccttcagccctgtaggtcccagcaggctgcttttccaccagctggctctcacaatggtttgaagatgc-tttttcctctatcttatttgctgttccctccagcttcctgtcagt----tgcaaattcaatcctttc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 102234 248 - 179258 TGGCCTGCTCCAGAGGGTTCCTCTGAAGGTGCGATTCCCACACGGGGGATCTCTGGGCCG----aggacagaga-ctcaccttcctgctctatgggcatgcttgccagcccacacac-aggcaccttcagccctgtaggtcctagcaggctgcttttccaccagctggctctcacaatggtttgaagatgc-tttttcctctatcttatttgctgttccctccagcttcctgtcagt----tgctaattcaatcctttc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5577996 247 - 5823884 TGCCCTGCTCCAGAGGGTTCCTCTGAAGGTGCGATTCCCACACGTGGGATCTCTGGGCCG----aggacagaga-ctcgccttcctgctctatgggcatgcttgccagcccacacac-aggcaccttcagccctgcaggtcccagcaggctgc-tttccaccagctggctctcacaatggtttgaagctgc-tttttcctctatcttatttgccgttccctccagcttcctgtcagt----tgctaattcaatcctttc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 58096 244 + 372756 TGGCCTGCTCCAGAGGGTTCCTCTGAAGGTGCAATTCCCACACGTGGGATCTCTGGGTGG----AGGACAGAGA-CT-GCCTTCCTGCTGTATGGGCATACTTGCCATCCCACCCATGGGGCACCTTTAGCCCTGCAGGTCCCAGCAGGCTGC-TTTCCGCCAGCTGGCTCTCACTATGGTTCGAAGCTGC-TTTT---tctatcttgtctgccattccctccagcttcttgtcagt----tgctaattcgatccttac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16294258 244 + 16356641 TGTCCTGCTCCAGAGGGTTCCTCTGAAGGTGCAGTTCCCACACATGGGATCTCTGGGTGG----AGGACAGAGA-CT-GCCTTCCTGCTGTATGGGCATCCTTGCCATCCCACCCATGGGGCACCTTCAGCCCTGCGGGTCCCAGCAAGCTGC-TTTCCGCCAGCTGGCTCTCACTATGGTTCGAAGCTGC-TTTT---TCTCTCTTGTCTgctgttccctccagcttcttgtcagt----tgctaattcgatcctttc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1163566 244 + 1231380 TGGCCTGCTCCAGAGGGTTCCTCTGAAGGTGCAGTTCCCACACGTGGGATCTCTGGGTGG----AGGACAGAGA-CT-GCCTTCCTGCTGTACGGGCATCCTTGCCATCCCACCCATGGGGCACCTTCAGCCTTGTGGGTCCCAGCAGGCTGC-TTTCCGCCAGCTGGCTCTCAGTGTGGtttgaagctgc-tttt---tctcccttgtctgctgttccctccagcttcttgtcagt----tgctaattcgatcctttc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2695861 242 + 11732439 TGGCCTGCTCCAGAGGGTTCCTCTGAAGGTGCAATTCCCACATGT--GATCTCTGGGTGG----AGGGCAGAGA-CT-GCCTTCCTGCTGTACGGGCACACTTGCCATCCCACCCATGGGGCACCTTCAGCCCTGCGGGTCCCAGCAGGCTGC-TTTCCAGCAGCTGGCCCTCACTGTGGtttgaagctgc-tttt---tctatcttgtctgctgttccctccagcttcttgtcagt----tgctaattcgatcctttc i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22857470 184 + 22939663 TGGCCTGCTCTGGAGGGTCCCTCAGAAGATCCCAT-------------------------------------------GCTTGCCTGT------GGTACACTCACCATCCCTTGCGT-GGG-GCCTTCAGCCTTGCAAGCCC-------------------CGGCCAGCTCTCACAGCAGtttgaagctgc-attccctcccatcttattggccactccttccagcttcctatcagt----tgctaatttggtCCTTTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181803994 199 + 182113224 TGGCCAACTCCAAAGGGACTCTAAATAGGTGCG-TTACCACAAAACACAGCTTAGGG--------ATATAGGGA-CTTATTTTCCTGTTCTGTGGA-GTACTTGT-GTTCCATTCAT-GGACACCTTTGACTTTGTGGGTCC---CAGGTAGC-----------------------ATAGTTG----------------TCCATCTTATTTGTTCTTCCTTCCAGCTTCTTGTCAGT----TGTTTGTT-GATCCTTTC i mm10.chr2 C 0 I 14 s canFam3.chr24 47617457 207 + 47698779 TGCTCTGC-------------------GGTGC------CACGCGAGGGGTCTCTGGGCAGGCCTGGGGCTGGGACCTCACCCCTCTGCACT-------------CCCGTCCA---AC-GGGTGTCTTCAGCCTCACG---TCCACTTGGCTTC-TCCCCACCTGCTGGCTCTTAGGATGGCTGGAGGTTGC-TCTT---CCTGCCCTAT-AACTGTTCTC-CCAGCTTCCTGCCAGTTAACTGCTCCTCTAGTTTTCTT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=709595.000000 s hg38.chr20_KI270870v1_alt 123749 66 + 183433 -cctctttgatctaaatcaccgataaaatgtcaaa-cCGCAGATTTGGCCCCCGTGTGAGGCCAGGC----------A s panTro5.chr20 66449969 66 + 66533130 -cctctttgatctaaatcaccgataaaatgtcaaa-cCGCAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125019 66 + 62195757 -cctctttgatctaaatcaccgataaaatgtcaaa-cCGCAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514097 66 - 578057 -cctctttgatctaaatcactgataaaatgtcaaa-cCGCAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036162 66 - 110113093 -cctctttgatctaaatcactgataaaatgtcaaa-cCACAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769155 66 - 92844088 -cctctttgatctaaatcaccgataaaatgtcaaa-cCACAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96435801 66 + 96509753 -CCTCTTTGATCTAAATCACCGATAAAATGTCAAA-CCACAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16906762 66 - 16982598 -cctctttgatctaaatcaccgataaaatgtcaaa-cCACAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3710034 66 - 3785965 -cctctttgatctaaatcaccgataaaatgtcaaa-cCACAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90288379 66 - 90373283 -cctctttgatctaaatcaccgataaaatgtcaaa-cCACAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 102482 66 - 179258 -cctctttgatctaaatcaccgataaaatgtcaaa-cCACAGATTTGGCCCCCGTGTGAGGCCAGGC----------A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5578243 66 - 5823884 -cctctttgatctaaatcaccgataaaatgtcaaa-cCACAGATCTGGCCCCCATGTGAGGCCAGGC----------A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 58340 76 + 372756 -cctttttgatcaaaatcaccgataaaatgtcaaa-cCACAGATTTGGTCCCCGTGTGAGGCCAGGTGAGGCCAGGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16294502 76 + 16356641 -cctctttgatctaaatcaccgataaaatgtcaaa-cCACAGATCTGGCCCCCGTGTGAGGCCAGGTGAGGCCAGGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1163810 76 + 1231380 -cctctttgatctaaatcaccgataaaatgtcaaa-cCACAGATTTGGCCCCCGTGTGAAGCCAGGTGAGGCCAGGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696103 76 + 11732439 -cctctttgatctaaatcaccgataaaatgtcaga-cCACAGATTTGGCCCCTGTGTGAGGCCAGGTGAGGCCAGGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22857654 40 + 22939663 -CCTAGTCAATTT-----------------TCAAA-CAACCAGTTTTGCCTGGGTATG-------------------A i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47617664 60 + 47698779 CTTGCCTGGATAGAAGTCACTGGTAAAATGTCAAACCCGCAGG--------CAGGGTGAGGCCCAGC----------G i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e mm10.chr2 181804193 14 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=1996621.000000 s hg38.chr20_KI270870v1_alt 123815 213 + 183433 GGGGTGTCAAACAGGCTCCAACTTTGGAGACTGCACTCCCTGGGActatgacctcagtttgttcacttataaaagtaggacaacaaact---aagtcg--ctcatgaggctcaagt---gacactctgccgccctcagcccatggtgaatactcactgaacgctagagagattgtggctAGGGTGGAGGAG-------GCCTCCCGTTAGGCCCTTTTGATTCTATCC s panTro5.chr20 66450035 213 + 66533130 GGGGTGTCAAACAGGCTCCAACTTTGGAGACTGCACTCCCTGGGACTATGgcctcagtttgttcacttataaaagtaggacaacaaact---aagtcg--ctcatgaggctcaagt---gacactctgccgccctcagcccatggtgaatactcactgaacgctagagagattgtggctAGGGTGGAGGAG-------GCCTCCCACTACGCCCTTTTGATTCTATCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125085 213 + 62195757 GGGGTGTCAAACAGGCTCCAACTTTGGAGACTGCACTCCCTGGGACTATGgcctcagtttgttcacttataaaagtaggacaacaaact---aagtcg--ctcatgaggctcaagt---gacactctgccgccctcagcccatggtgaatactcactgaacgctagagagattgtggctAGGGTGGAGGAG-------GCCTCCCATTACGCCCTTTTGATTCTATCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514163 213 - 578057 GGGGTGTCAAACAGGCTCCAACTTTGGAGACTGCACTCCCTGGGActatgacctcagtttgttcacttataaaagtaggacaacaaact---aagtcg--ctcatgaggctcaagt---gacactctgccgccctcagcccacggtgaatactcactgaacgctagagagattgtggctAGGGTGGAGGAG-------GCCTCCCATTAGGCCCTTTTGATTCTATCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036228 211 - 110113093 GGGGTGTCAAACAGGCTCCAACTTTGGAGACTGTACTCCCTGGGACTATGACCTCAGTTTGTTCACTTACAAAAGTAGGACAACAAACG---AAGTCA--CTCATGAGGCTCCAGC---GACACTCTGCCGCCCTCAGCCCATGGTGAATACTCACTGAACGCT--AGAGATTGTGGCCAGGCTGGAGGAG-------GCCTCCCATGAGGCCCTTTTGATTCCATCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769221 208 - 92844088 GGGGTGTCAAACAGGTTCCAACTTCGGAGACTGCGCTCCCTGGGACTATGACCTCAGTTTGTTTGCTTATAAAAGTAGGACAACAAACT---AAGGCA--CTCATGAGGCTCAAGT---G--ACTCTGCCGCCCTCAGCCCCT-GTGAACACTCACTGAACGCT--AGAGACTGTGGCTAGGGTGCAGGAG-------GCCTCCCATCAGGCTCTGTTGATTCTGTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96435867 208 + 96509753 GGGGTGTCAAACAGGTTCCAACTTCGGAGACTGCGCTCCCTGGGACTATGACCTCAGTTTGTTTGCTTATAAAAGTAGGACAACAAACT---AAGGCA--CTCATGAGGCTCAAGT---G--ACTCTGCCGCCCTCAGCCCCT-GTGAACACTCACTGAACGCT--AGAGACTGTGGCTAGGGTGCAGGAG-------GCCTCCCATCAGGCTCTGTTGATTCTGTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16906828 208 - 16982598 GGGGTGTCAAACAGGTTCCAACTTCGGAGACTGCGCTCCCTGGGACTATGACCTCAGTTTGTTTGCTTATAAAAGTAGGACAACAAACT---AAGGCA--CTCATGAGGCTCAAGT---G--ACTCTGCCGCCCTCAGCCCCT-GTGAACACTCACTGAACGCT--AGAGACTGTGGCTAGGGTGCAGGAG-------GCCTCCCATCAGGCTCTGTTGATTCTGTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3710100 208 - 3785965 GGGGTGTCAAACAGGTTCCAACTTCGGAGACTGTGCTCCCTGGGACTATGACCTCAGTTTGTTCACTTATAAAAGTAGGACAACAAACT---AAGTCG--CTCATGAGGCTCAAGT---G--ACTCTGCCGCCCTCAGCCCCT-GTGAACACTCACTGAACACT--AGAGACTGTGGCTAGGGTGCAGGAG-------GCCTCCCATCAGGCTCTGTTGATTCTGTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90288445 208 - 90373283 GGGGTGTCAAACAGGTTCCAACTTCGGAGACTGCGCTCCCTGGGACTATGACCTCAGTTTGTTCGCTTATAAAAGTAGGAAAACAAACT---AAGTCG--CTCATGAGGCTCAAGT---G--ACTCTGCCGCCCTCAGCCCCT-GTGAACACTCACTGAACGCT--AGAGACTGTGGCTAGGGTGCAGGAG-------GCCTCCCATCAGGCTCTGTTGATTCTGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 102548 207 - 179258 GGGGTGTCAAACAGGTTCCAACTTCGGAGACTGCGCTCCCTGGGACTATGACCTCAGTTTGTTCGCTTATAAAAGTAGGACAACAAACT---AAGTCG--CTCATGAGGCTCAAGT---G--ACTCTGCCGCCCTCAGCCCCT-GTGAACACTCACTGAACGCT--AGAGACTGTGGCTAGGGTGCAGGAG-------GCCTCCCATCAGGCTCTGTT-ATTCTGTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5578309 209 - 5823884 GGGGTGTCAAACAGGTTCCAACTTCGGAGACTGCGCTCCCTGGGACTATGACCTCAGTTTGTTCGCTTATAAAAGTAGGGCAACAAACT---AAGTCG--CTCATGAGGCTCAAGT---G--ACTCTGCCGCCCTCAGCCCCTGGTGAACACTCACTGAACGCT--AGAGACTGTGGCTAGGGTGCAGGAG-------GCCTCCCATCAGGCTCTGTTGATTCTGTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 58416 213 + 372756 GGGGTGTCAAACAGGCTCCAACCTTGGAGACTGCACTTCCTGAGACTAGGACCTCAGTTTGTTCACTTATAAAAGTTGGACAACAAACT---AAGTCGCTCTCATGAGGCTCAAGT---GACACCCTGCTGCCCTCAGCCTGTGGTGAATACTCACTGAATGCT--AGAGACTGTGGCTAGGGTGGAGTAG-------GCCTCCCATTAGGCTCTGTTGATTCTACCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16294578 210 + 16356641 GGGGTGTCAAAAAGGCTCCAGCCTTGGAGACTGTATTCCCTGAGACTAggacctcagtttgttcacttataaaagtaggacaacaaact---aagtca--ctcatgaggctcaggt---gacaccctgccgccctcagcctgtggtgagtactcactgaacgct--agagattgtggct-GGGTGGGGGAG-------GCCTCCCATGAGGCTCTGTTGATTCTACCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1163886 212 + 1231380 GGGGTGTCAAACAGGCTACAACCTTGGAGACTGCACTCCCTGAGACCAGGACCTCAGTTTGTTCACTTATAAAAGTAGGTCAACAAACT---GACTCG--CTGATGAGGCTCAAGTGACGACACCCTGC-GCCCTCAGCCCGTGGTGAATACTCACTGAACGCT--GGAGATTGTGGCT-AGGTGGAGGAG-------GCCTCCCAGTAGGCTCTGTTGATTCTACCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696179 195 + 11732439 GGGGTGTCAAACAGGCTACAACCTTGGAGACT---------------CGGACCTCAGTTTGTTCACTTACAAGAGCAGGAGAACACACG---GAGTTG--CTCGTGAGGCTCAAGC---CCCTCCCTGCCGCCCTCAGCCCGTGGTGAGCACTCACTGAACACT--GG-GATTGCAGCTGGGGTGGAGGAG-------CCCTCCCATTAGGCTCTGCTGATTCCACCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22857694 177 + 22939663 GGG--GTCAAACAGGCCCCAACCGTGGAGGCTGCACTGCCTAGGATTGTGAGGTCAGTTTGTTTACCTATAAAAGAAGGACAATAAACTATAAGATTG--CTCATG-------------G----TCTAC--------------------------CTGAA-GTT--AATAGCTATGGCCAGGGTGGAGGAGCCTCCCATCTTCCCATTAGGCTCTGTGGGCT-TATCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e canFam3.chr24 47617724 0 + 47698779 C e mm10.chr2 181804193 14 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=296041.000000 s hg38.chr20_KI270870v1_alt 124028 30 + 183433 AGCCCACATTTCTGGCTATCGAACTTTGGG s panTro5.chr20 66450248 30 + 66533130 AGCCCACGTTTCTGGCTATCGAACTTTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125298 30 + 62195757 AGCACACATTTCTGGCTATCGAACTTTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514376 30 - 578057 AGCCCACATTTCTGGCTGTCGAACTTTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036439 30 - 110113093 AGCCCACGTTTCTGGCTGTCGAACTTTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769429 30 - 92844088 AGCCCACATTTCTGGTTGTCAAACTTTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96436075 30 + 96509753 AGCCCACATTTCTGGTTGTCGAACTTTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907036 30 - 16982598 AGCCCACATTTCTGGTTGTCGAACTTTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3710308 30 - 3785965 AGCCCACATTTCTGGTTGTCGAACTTTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90288653 30 - 90373283 AGCCCACATTTCTGGTTGTCGAACTTTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 102755 30 - 179258 AGCCCACATTTCTGGTTGTCGAACTTTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5578518 29 - 5823884 AGCCCACATTTCTGGTTGTCGAAC-TTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 58629 29 + 372756 AGCCCACATTTCTGGTTGTTGAACTTC-GG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16294788 29 + 16356641 GGCCCACATTTCTGGTTGTCGAACTTT-GG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164098 29 + 1231380 AGCCCACATTTCTGGTTGTCGGAATTC-GG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696374 28 + 11732439 GGCCCACATTTCTGG-TGTCGAACTTT-GG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22857871 28 + 22939663 GGCCCGTGTTTCTG--CATTGGCCCTGGGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47617724 30 + 47698779 AGCTCATGTTTCCGGGCGTCACACGCTGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e mm10.chr2 181804193 14 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=1096916.000000 s hg38.chr20_KI270870v1_alt 124058 110 + 183433 GTGTGAGGACGGGCTTTGCAAAGCTTCGTTGGCATTGTGGACAATAAGTGTACAGATTCTGACTGAAGCCTTGGTCAAGGAAGCC-ATCAACGGTGGTACCAATGTTAAGC s panTro5.chr20 66450278 110 + 66533130 GTGTGAGGACAGGCTTTGCAAAGCTTCGTTGGCATCGTGGATGATAAGTGTACAGATTCTGACTGAAGCCTTGGTCAAGGCAGCC-ATCAACGGTGGTACCAATGTTAAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125328 110 + 62195757 GTGTGAGGACAGGCTTTGCAAAGCTTCGTTGGCATCGTGGACGATAAGTGTACAGATTCTGACTGAAGCCTTGGTCAAGGCAGCC-ATCAACGGTGGTACCAATGTTAAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514406 110 - 578057 GTGTGAGGACAGGCTTTGCAAAGCTTCGTTGGCATCGTGGACAATAAGTGTACAGATTCTGACTGAAGCCTTGGTCAAGGAAGCC-ATCAACGGTGGTACCAATGTTAAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036469 110 - 110113093 GTGTGAGGAGGGGCTTTGCAAAGCTTCGTTGGCATCGCGGACAATAAATGGACAGATTCTGACTGAAGCCTTGGCCAAGGGAGCC-ATCAACGGTGGCACCAATGTTGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769459 110 - 92844088 GTGTGAGGACAGGCTTTGCCAAGCTTTGTTGGCATTGCGGACAATAAGTGCACAGATTCTGACTGAAGCCTTCGCCAAGGAAGCC-ATCAACAGTGGTACCAATGTTAACt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96436105 110 + 96509753 GTGTGAGGACAGGCTTTGCCAAGCTTTGTTGGCATTGCGGACAATAAGTGCACAGATTCTGACTGAAGCCTTCGCCAAGGAAGCC-ATCAACAGTGGTACCAATGTTAACt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907066 110 - 16982598 GTGTGAGGACAGGCTTTGCCAAGCTTTGTTGGCATTGCGGACAATAAGTGCACAGATTCTGACTGAAGCCTTCGCCAAGGAAGCC-ATCAACAGTGGTACCAATGTTAACt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3710338 110 - 3785965 GTGTGAGGACAGGCTTTGCCAAGCTTTGTTGGCATTGCGGACAATAAATGCACAGATTCTGACTGAAGCCTTGGCCAAGGAAGCC-ATCAACAGTGGTACCAATGTTAACt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90288683 110 - 90373283 GTGTGAGGACAGGCTTTGCCAAACTTTGTTGGCATTGCGGACAATAAGTGCACAGATTCTGACTGAAGCCTTGGCCAAGGAAGCC-ATCAACAGTGGTACCAATGTTAACt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 102785 110 - 179258 GTCTGAGGACAGGCTTTGCCAAGCTTTGTTGGCATTGCGGACAATAAGTGCACAGATTCTGACTGAAGCCTTGGCCAAGGAAGCC-ATCAACAGTGGTACCAATGTTAACt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5578547 110 - 5823884 GTGTGAGGACAGGCTTTGCCAAGCTTTGTTGGCATTGCGGACAATACGTGTATAGATTCTGACTGAAGCCTTGGCCAAGGAAGCC-ATCAACAGTGGTACCAATGTTAACt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 58658 110 + 372756 GTGTGAGGACAGGCTTTGCAAAGCTTCGTTGGCATTGCAGACAATCAGTCTGCAGATTCTGACAGAAGCCTTGGACAAGGAAGCC-ATCGAAAGTGGTCCCAGCGTTAAGt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16294817 110 + 16356641 GTGTGAGGACAGGCTTTGCAAAGCTTTGTTGGCACGGCAGACAATAAGTCTGCAGATTCTGATGGAAGCCTTGGACAAGGAAGCC-ATCAAAAGTAGTACCAGCATTAAAt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164127 110 + 1231380 GTGTGAGGACAGGCTTTGCAAAGCTTTGTTGGCATTGCAGACAATAAGTCTGCAGATTCTGACGGAAGCCTTGGACAAGGAAGCC-ATCAAAAGTGGTACCGGCGTTAAGt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696402 110 + 11732439 GTGTGAGAACAGGCTTTGCAAAGCTTTGCTGGCATTGCAGACAATAAGTCTGCAGATTCTGACGGAGGCCTTGGACAAGGAAGCC-ATCAAAAGTGGTACCAGCGTTAAGt i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47617754 110 + 47698779 GTGTGGGGAGAACCTTTGTGCACTTCTGCTGGCGTCACAGGCACTAAGTCTGT-GCTGCGGGACGGAGCCCTGGCCGAGGAAGCCAACCGAACATGGTTCCCATGTTAAGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e mm10.chr2 181804193 14 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e otoGar3.GL873542 22857899 0 + 22939663 C a score=1566743.000000 s hg38.chr20_KI270870v1_alt 124168 176 + 183433 TTATTAttattattattatttttagtgacagagtgtcactctgttgctcaggctggagtgcagtggttt---caatcataactcactataacctcaaactcctggtctcaagtgatcctcccacctcagcctcccgagtacctaggaatacagatgtgccatcatacctgcctattttt s panTro5.chr20 66450388 176 + 66533130 TTATTAttcttattattatttttagtgacagagtgtcactctgttgctcaggctggagtgcagtggttt---caatcataactcactataacctcaaactcctggtctcaagtgatcctcccacctcagcctcccgagtacctaggaatacagatgtgccatcatgcctgcctattttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125438 176 + 62195757 TTATTGttattattattatttttagtgacagagtgtcactctgttgctcaggctggagtgcagtggttt---caatcataactcactataaccttaaactcctggtctcaagtgatcctcccacctcagcctcctgagtacctaggaatacagatgtgccatcatgcctgcctagtttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514516 176 - 578057 TTATTAttattgttattatttttagtgacagagtgtcactctgttgctcaggctggagtgcagtggttt---caatcgtaactcactataacctcaaactcctggtctcaagtgatcctcccacctcagcctcccgagtacctaggaatacagatgtgccatcatgcctgcctattttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036579 176 - 110113093 TTATTATTACTAttattatttttactgacagagtgtcacgctgttgctcaggctggagtgcagtggttt---cagtcatagctcactataacctcaaactcctggtctcaagttatcctcccctctcaacctcccgagtacctaggaatgcagatgtgccaccatgcctggctattttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769569 171 - 92844088 ---ttattattattattatttctagtgac--agtctcactctgttgctcaggctggactgcagtggttt---caatcataactcactgtaacctcaaactcctggtctcaagtgatcctcccacctcagcctcctgagtagctaggagtacaggtgcgccaccatgcctggctattttt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96436215 168 + 96509753 ---ttattattattattatttctagtgacagagtctcactctgtttctcaggctggactgcagtggttt---caatcataactcactgtaacctcaaactcctggtctcaagtgatcctcccacctcagcctcctgagtagctaggagtacaggtgcgccaccatgcctggcta----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907176 168 - 16982598 ---ttattattattattatttctagtgacagagtctcactctgttgctcaggctggactgcagtggttt---caatcataactcactgtaacctcaaactcctggtctcaagtgatcctcccacctcagcctcctgagtagctaggagtacaggtgcgccaccatgcctggcta----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3710448 173 - 3785965 ---ttattattattattatttctagtgacagagtctcactctgttgctcaggctggactgcagtggttt---caatcataactcactgtaacctcaaactcctggtctcaagtgatcctcccacctcagcctcctgagtagctaggaatacaggtgcgccaccatgcctggctattttt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90288793 176 - 90373283 ttattattattattattatttctagtgacagagtcgtactctgttgctcaggctggagtgcagtggttt---caatcataactcactgtaacctcaaactcctggtctcaagtgatcctcccacctcagcctcctgagtagctaggaatacaggtgcgccaccatgcctggctattttt i chlSab2.chr2 C 0 I 7 s manLeu1.NW_012101652v1 102895 173 - 179258 ---ttattattattattatttctagtgacagagtctcactctgttgctcaggctggactgcagtggttt---caatcataactcactgtaacctcaaactcctggtctcaagtgatcctcccacctcagcctcctgagtagctaggaatacaggtgcgccaccatgcctggctattttt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5578657 173 - 5823884 ---ttattattattatcatttctagtgacagagtctcactctgttgctcaggctggagtgcagtggttt---caatcataactcactataacctcaaactcctggtctcaagtgatcctcccacctcagcctcctgagtagctaggaatacaggtgtgccacaatgcctggctattttt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 58768 172 + 372756 ------ttattattattatttttagtggtagagtcttactctgttgcccaggctagagt-cagtggtgcccacaatcataactcaacgtaacctcaaactcctggtctcaagtcatcctgtgacctcagactcctgggtagcagggagtacagatgtgccaccatgcctggctattatg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16294927 167 + 16356641 ------ttattattattatttttagtgatagggtcttactctgttgcccaggctggagt-cagtggtgc---caatcataactcagtgtaacctcaaactcctggtctcaagtcatcc--tcaccttagcctcccgagcagctgggaatacaggtgtgccaccatgcctggctattatg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164237 168 + 1231380 ------tttttattattatttttagtgatagggtcttactctgctgcccaggctggagt-cagtggtgc---caatcataactcaacataacctcaaactcctggtctc-agtcatcctctcacctcagcctcccgagtagctgggaatacaggtgtgccaccatgcctggctattatg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696512 169 + 11732439 ------ttattattataatttttagtgatagagtcttactctgttgcccaggctggagt-cagtggtgc---cagtcataactcgatgtaacctcaaactcccggtctcaagtcatcctctcacctcagcctgccgagtagctgggaatacagatggaccaccatgcctggctgttatg i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e canFam3.chr24 47617864 0 + 47698779 C e mm10.chr2 181804193 14 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e otoGar3.GL873542 22857899 0 + 22939663 C a score=7098.000000 s hg38.chr20_KI270870v1_alt 124344 1 + 183433 t s panTro5.chr20 66450564 1 + 66533130 t i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125614 1 + 62195757 t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514692 1 - 578057 t i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036755 1 - 110113093 t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769740 1 - 92844088 t i rheMac8.chr10 C 0 I 6 s cerAty1.NW_012001373v1 3710621 1 - 3785965 t i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 103068 1 - 179258 t i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5578830 1 - 5823884 t i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 58940 1 + 372756 t i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295094 1 + 16356641 t i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164405 1 + 1231380 t i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696681 1 + 11732439 t i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e canFam3.chr24 47617864 0 + 47698779 C e chlSab2.chr2 90288969 7 - 90373283 I e mm10.chr2 181804193 14 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e macNem1.NW_012014244v1 16907344 0 - 16982598 C e otoGar3.GL873542 22857899 0 + 22939663 C e macFas5.chr10 96436383 0 + 96509753 C a score=4095.000000 s hg38.chr20_KI270870v1_alt 124345 1 + 183433 t s panTro5.chr20 66450565 1 + 66533130 t i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125615 1 + 62195757 t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514693 1 - 578057 t i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036756 1 - 110113093 t i nomLeu3.chr13 C 0 C 0 s colAng1.NW_012114444v1 5578831 1 - 5823884 t i colAng1.NW_012114444v1 C 0 I 5 s calJac3.chrUn_GL286459 58941 1 + 372756 t i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295095 1 + 16356641 t i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164406 1 + 1231380 t i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696682 1 + 11732439 t i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e canFam3.chr24 47617864 0 + 47698779 C e cerAty1.NW_012001373v1 3710622 0 - 3785965 C e chlSab2.chr2 90288969 7 - 90373283 I e mm10.chr2 181804193 14 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e manLeu1.NW_012101652v1 103069 0 - 179258 C e macNem1.NW_012014244v1 16907344 0 - 16982598 C e rheMac8.chr10 92769741 6 - 92844088 I e otoGar3.GL873542 22857899 0 + 22939663 C e macFas5.chr10 96436383 0 + 96509753 C a score=-40863.000000 s hg38.chr20_KI270870v1_alt 124346 17 + 183433 t-------gcgttttttttttttt s panTro5.chr20 66450566 19 + 66533130 t-----ttgcattttttttttttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125616 16 + 62195757 t--------tgtgttgtttttttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514694 6 - 578057 t------------------tgcgt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036757 24 - 110113093 tgcgtttttttttttttttttttt i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96436383 11 + 96509753 -------------ttttttcgtgt i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16907344 11 - 16982598 -------------ttttttcatgt i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3710622 5 - 3785965 -------------------catgt i cerAty1.NW_012001373v1 C 0 I 1 s manLeu1.NW_012101652v1 103069 5 - 179258 -------------------catgt i manLeu1.NW_012101652v1 C 0 I 1 s calJac3.chrUn_GL286459 58942 8 + 372756 ------------aggatttt---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295096 8 + 16356641 ------------accgtttt---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164407 8 + 1231380 ------------gtcatttt---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696683 8 + 11732439 ------------accgtttt---- i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e canFam3.chr24 47617864 0 + 47698779 C e colAng1.NW_012114444v1 5578832 5 - 5823884 I e chlSab2.chr2 90288969 7 - 90373283 I e mm10.chr2 181804193 14 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e rheMac8.chr10 92769741 6 - 92844088 I e otoGar3.GL873542 22857899 0 + 22939663 C a score=1068915.000000 s hg38.chr20_KI270870v1_alt 124363 121 + 183433 cttttttttgtagagagggtctcactaggttgcccaagccggtttcttactcctggcttcaacagacctgccttggcctccaaaagtgcttggattatagacataagccaccatacctgac s panTro5.chr20 66450585 121 + 66533130 tttttttttgtagagagggtctcactaggttgcccaagtcggtttcttactcctggcttcaacagacctgccttggcctccaaaagtgcttggattatagacataagccaccatacctgac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125632 121 + 62195757 tttttttttgtagagagtgtctcactaggttgcccaagccgggttcttactcctggcttcaacagacctgccttggcctccagaagtgcttggattatagacataagccaccatacctgac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514700 121 - 578057 tttttttttgtggagagggttacactaggttgcccaagctggtttcttactcctggcttcaacagacctgccttggcctccaaaactgcttggattatagacataagccaccatacctgac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036781 121 - 110113093 tttttttttgtagagagggtctcactatgttgcccaagctggtttcttactcctggcttcaagagacctgccttggcctccaaaagtgcttggattatagacataagccaccacacctgac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769747 121 - 92844088 attttttttgtagagagggtctcactacgttgcctaagctggtttcttactgttggcttcaagagacctgccttggcctcccaaagtgcttggattatagacataagccaccacacctgac i rheMac8.chr10 I 6 C 0 s macFas5.chr10 96436395 121 + 96509753 attttttttgtagagagggtctcactacgttgcctaagctggtttcttactgttggcttcaagagacctgccttggcctcccaaagtgcttggattatagacataagccaccacacctgac i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16907356 121 - 16982598 attttttttgtagagagggtctcactacgttgcctaagctggtttcttactgttggcttcaagagacctgccttggcctcccaaagtgcttggattatagacataagccaccacacctgac i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3710628 121 - 3785965 attttttttgtagagagggtctcactacgttgcctaagctggtttcttactgttggcttcaacagacctgccttggcctcccaaagtgcttggattatagacataagccaccacacctgac i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90288976 121 - 90373283 attttttttgtagagagggtctcactacgttgcctaagctggtttcttactgttggcttcaagagacctgccttggcctcccaaagtgcttggattatagacataagccaccacacctgac i chlSab2.chr2 I 7 C 0 s manLeu1.NW_012101652v1 103075 121 - 179258 attttttttgtagagagggtctcactacgttgcttaagctggtttcttactgttggcttcaagagacctgccttggcctcccaaagtgcttggattatagacataagccaccacacctgac i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5578837 121 - 5823884 attgtttttatagagagggtctcactatgttgcctaagctggtttctcactgttggcttcaagagacctgccttggcctcccaaagtgcttggagtatagacataagccaccacacctgac i colAng1.NW_012114444v1 I 5 C 0 s calJac3.chrUn_GL286459 58950 114 + 372756 -------ttgtagagagggtctcactgtgttgcccgagctggtctcttactcctggcttcaagagacctgtcttggcctcacaaagtgcttggatcatagacataagccaccgcacctgac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295104 114 + 16356641 -------gtgtggagagggtctcactatgttgcccaagctggtctcttacttctggctttaagagacctgtcttggcctcacaaagtgcttggattatagacataagccaccgcacctgac i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164415 113 + 1231380 --------tgtagagagggcctcagtatgttgcccaagctggtctcttactcctggcttcaagagacctgtcttggcctcacaaagtgcttggattatagacataagccaccacacctgac i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696691 64 + 11732439 -------ttgt--------------------------------------------------agagacCTGTCTCGGCCTCACAAAATGCTTGTATTATAGACAGAAGCCACCGCACCTGAC i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e canFam3.chr24 47617864 0 + 47698779 C e mm10.chr2 181804193 14 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e otoGar3.GL873542 22857899 0 + 22939663 C a score=115766.000000 s hg38.chr20_KI270870v1_alt 124484 10 + 183433 cCAATGTTAA s panTro5.chr20 66450706 10 + 66533130 cCAATGTTAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125753 10 + 62195757 cCAATGTTAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514821 10 - 578057 cCAATGTTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036902 10 - 110113093 cCAATGTTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769868 10 - 92844088 cCAATGTTAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96436516 10 + 96509753 cCAATGTTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907477 10 - 16982598 cCAATGTTAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3710749 10 - 3785965 cCAATGTTAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289097 10 - 90373283 cCAATGTTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103196 10 - 179258 cCAATGTTAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5578958 10 - 5823884 cCAATGTTAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59064 10 + 372756 cCAGTGTTAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295218 10 + 16356641 cCAGTGTTAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164528 10 + 1231380 cCAGTGTTAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696755 10 + 11732439 CCAGTGTTAA i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181804207 10 + 182113224 CCAATGTAGA i mm10.chr2 I 14 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e canFam3.chr24 47617864 0 + 47698779 C e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e otoGar3.GL873542 22857899 0 + 22939663 C a score=21432.000000 s hg38.chr20_KI270870v1_alt 124494 2 + 183433 GT s panTro5.chr20 66450716 2 + 66533130 GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125763 2 + 62195757 GT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514831 2 - 578057 GT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036912 2 - 110113093 GT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769878 2 - 92844088 GT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96436526 2 + 96509753 GT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907487 2 - 16982598 GT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3710759 2 - 3785965 GT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289107 2 - 90373283 GT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103206 2 - 179258 AT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5578968 2 - 5823884 GT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59074 2 + 372756 GT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295228 2 + 16356641 GT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164538 2 + 1231380 GT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696765 2 + 11732439 GT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22857899 2 + 22939663 GT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181804217 1 + 182113224 -G i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e canFam3.chr24 47617864 0 + 47698779 C e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=2640951.000000 s hg38.chr20_KI270870v1_alt 124496 259 + 183433 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TCACTCTT--GCAACTTTTCTATCTGCCACTGGGGTCAGGATCCATCCTGGGGCTCCCACCCTTCCT-GGAGAAGGAGAAAACACCCACGT-----C-CTGGTAGTGTTCAGTTCTTCCAGGCCCA---TCAGAGCTGGCC-----GTGGTTGCAGGGCTGGCCTGGTGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCAGCACCTTGGAGGCTGTCATTGtcagc s panTro5.chr20 66450718 259 + 66533130 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TCACTCTT--GCAACTTTTCTATCTGCCACTGGGGTCAGGATCCATCCTGGGGCTCCCACCCTTCCT-GGAGAAGGAGAAAATACCCACGT-----C-CTGGTAGAGTTCAGTTCTTCCAGGCCCA---TCAGAGCTGGCT-----GTGGTTGCAGGGCTGGCCTGGCGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCAGCACCTTGGAGGCTGTCATTGtcagc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62125765 259 + 62195757 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TCACTCTT--GCAACTTTTCTATCTGCCACTGGGGTCAGGATCCATCCTGGGGCTCCCACCCTTCCT-GGAGAAGGAGAAAACATCCACGT-----C-CTGGTAGTGTTCAGTTCTTCCAGGCCCA---TCAGAGCTGGCT-----GTGGTTGCAGGGCTGGCCTGGCGGTCCTCTGC-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCAGCACCTTGGAGGCTGTCATTGtcagc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 514833 258 - 578057 TTAAAGTTAG-TTTTTCC----------CTCGTGGCC--TCATTCTT--GCAATTTTTCTATCTGCCACTGGGGCCAGGGTCCATCCTGGGGCTCCCACGCTTCCT-GGAGAAGGAGAAAACACCCACGT-----C-CTGGTAGTGTTCAGTTCTTCCAGGCCCA---TCAGAGCTGGCC-----GTGGTTGCAGGGCTGGCCTGGCGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCAGCACCTTGGAGGCTGTCATTGtcagc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110036914 264 - 110113093 TTAAAGTTAGTTTTTTCC----------CGCCTGGCC--TCACTCTT--GCAACTTTTCTATCTGCCACTGGGGTCAGGGTCCATCCTGGGGCTCCCACCCTTCCT-GGAGAAGGAGAACACACCCACGTCCTGGC-CTGGTAGTGTTCAGTTCTTCCAGGTCCA---TCAGAGCTGGTC-----ATGGTTGCAGGGCTGGCCTGGAGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTGAAGTTCTCGT---AGCACCCGGCACCTTGGAGGCTGTCATTGtcagc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92769880 259 - 92844088 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TCACTCTT--GTAACTCTTCTATCTGCCACTGGGGCCAGGGTCCATCCTGTGGCTCCCACCCTTCTT-GGAGAAGGAGAACGCACCCAGGT-----C-CCGGTAGTGTTCAGTTCTTCCAGGCCCA---TCAGAGCTAGTC-----ACAGTCGCAGCACTGGCCTGGCGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCAGCACCTTAGAGGCTGTCATTGTCAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96436528 259 + 96509753 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TCACTCTT--GTAACTCTTCTATCTGCCACTGGGGCCAGGGTCCATCCTGTGGCTCCCACCCTTCTT-GGAGAAGGAGAACGCACCCAGGT-----C-CCGGTAGTGTTCAGTTCTTCCAGGCCCA---TCAGAGCTGGTC-----ACAGTCGCAGCACTGGCCTGGCGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCAGCACCTTAGAGGCTGTCATTGTCAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907489 259 - 16982598 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TCACTCTT--GTAACTCTTCTATCTGCCACTGGGGCCAGGGTCCATCCTGTGGCTCCCACCCTTCTT-GGAGAAGGAGAACGCACCCAGGT-----C-CCGGTAGTGTTCAGTTCTTCCAGGCCCA---TCAGAGCTGGTC-----ACAGTCGCAGCACTGGCCTGGCGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCAGCACCTTAGAGGCTGTCATTGTCAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3710761 259 - 3785965 TTAAAGTTAGTATTTTCC----------CTCCTGGCC--TCACTCTT--GTAACTCTTCTATCTGCCACTGGGGCCAGGGTCCATCCTGTGGCTCCCACACTTCTT-GGAGAAGGAGAACGCACCCAGGT-----C-CTGGTAGTGTTCAGTTCTTCCAGGCCCA---TCAGAGCTGGTC-----ACAGTTGCAGGACTGGCCTGGCGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCGGCACCTTGGAGGCTGTCATTGTCAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289109 259 - 90373283 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TCACTCTT--GTAACTCTTCTATCTGCCACTGGGGCCAGGGTCCATCCTGTGGCTCCCACCCTTCTT-GGAGAAGGAGAACGCACCCGAGT-----C-CTGGTAGTGTTCAGTTCTTCCAGGCCCA---TCAGAGCTGGTC-----ACAGTTGCAGGACTGGCCTGGCGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCAGCACCTTAGAGGCTGTCATTGTCAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103208 259 - 179258 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TCACTCTT--GTAACTCTTCTATCTGCCACTGGGGCCAGGGTCCATCCTGTGGCTCCCACCCTTCTT-GGAGAAGGAGAACGCACCCAGGT-----C-CTGGTAGTGTTCGGTTCTTCCAGGCCCA---TCAGAGCTGGTC-----ACAGTTGCAGGACTGGCCTGGAGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTCGT---AGCACCCAGCACCTTGGAGGCTGTCATTGTCAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5578970 262 - 5823884 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TTACTCTT--GTCACTTTTCTATCTGCCACTGGGTCCAGGGTCCATCCTGGGGCTCCCACCCTTCTT-GGAGAAGGAGAATGCACCCAAGT-----C-CTGGTAGTGTTCAGTTCTTCCAGGCCCA---TCAGAGCTGGTC-----ACAGTTGCAGGACTGGCCTGGCGGTCCTCTGT-GCT---GGGCT-CTGTTCTTAGTCCACACTTAAGTTCTTGTAGCAGCACCCAGCACCTTGGAGGCTGTCATTGTCAGC i colAng1.NW_012114444v1 C 0 I 305 s calJac3.chrUn_GL286459 59076 259 + 372756 TTAAAGTTAGTTTTTTCC----------CTCCTGGCC--TCACTCTT-AGCAATTTTTCTCTCTGCCACCAGGGCCAGGGTCCATCCCGGGGCTCCCACCCTTCCT-AGAGAAGGAGAACACACCCAT-T-----C-CTGGTAGGGTTCGGTTTTCCCAGGCCCA---TCACAGCTGGTC-----ATGGTTGCAGGGCTGGTCTGGAGTTCCTCTGT-GCT---GGGCT-GTGTTCTTAGTCCACACTTAAGTTCTCAT---AGAACCCAGAACCTTGGACGCTGCCACTGTTAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295230 258 + 16356641 TTAAAGTTAGTTTTTTCC----------CTGCTGGCC--TCACTCTT-AGCAACTTTTCTATCTGCTACCAGGGCCAGGGTCCATCCTGGGGCCCCCACCCTTCCT-GGAGAAGGAGAACACA-CCAT-T-----C-CTGGTAGTGTTTGGTTTTCCCAGGCCCA---TCACAGCTGGTC-----ATGGTTGCAGGGCTGGCCTGGAGGTCCTCTGT-GCT---GGGCT-GTGTTCTTAGTCCACACTTAAGTTCTTGT---AGCACCCAGAACCTTGCAGGCTGACACTGTTAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164540 257 + 1231380 TTGAAGTTAGCTTTTTCC----------CTCCTGGCC--TCACTCTT-AGCAACTTTTCTATCTGCCACCAGGGCCAGGGTCCATCCCGGGGCTCCCACCCTTCCT-AGAGAAGGAGAACACACCCAT-T-----C-CTGGTAGTGTTCGGTTTTCCCAGGCCCA---TCACAGCTGGTC-----CTG--TGAAGGGCTGGCCTGGAGGTCCTCCGT-GCT---GGGCC-GTGTTCTTAGTCCACACTTAAGTTCTTGT---AGCACCCAGAACCTTGGAGGCTGCCACTGTTAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2696767 257 + 11732439 TTAAAGTTCGTTTTTTCC----------CTCCTGGCC--TCACTCTT-AGCAACTTTTCTATCTGCCACCAGGGCCAGGGTCCATGCCGGGGCTCCCACCCTTGCT-AGAGAAGGAGAACACGCACAT-T-----C-CTGGTAGTGTTCGGTTTTCCCAGGCCCA---TCACAGCTGGCC-----ATGGTTGCAGGGCTGGCCCGGAGGTCCTCTGT-GCT---GGGCT-GTGTTCTTAGTCCACACTTAAGTTCTCGT---GGCACCCAGAACCTTGGAGGCTGCCGCTGTTA-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22857901 247 + 22939663 TTTAGTTTAGTTTTCCCC-TGTTGGTGTCAACTGGCC--TCACTCCT--GCAACTTTTCCAGATGCCACT-GGTCCGGAGTCCAGCCCAGGCTTCCCACTTTCTTTGGGGGAGGGAGCATATGCCCATCC-----T-CTGGTGGTATCCAGTTTCTTGAGACCCT---TCAGAGCAAGGG-----CT--CTGCAATGGTGACAAGG-----CTCTGT-GCTCCAGGCCT-CTGTTCTTAGTT--CATTTAAG-TCTAAC---AGGACCTAGTTTCT--GATGGT------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181804218 223 + 182113224 GTCAAGTTAAATGTCTCCTTGAGGGTATCAGATAGTC--TTGCTCTT--GCAGCTTCCCCAGGAGTTGCTGAGCATAGTGCCCAGCCTAGGACTTCATTCCACCAT-AGAGC---------CAATCTTAT-----CACTGCTGTTATGTGGTCTTCACAGGACCT---TAAGAA-TGGTC---------TTACAGTACCAGCCTTCTGGTTCTCTCC-TCA---G----------------CCACATTCAAGTTTCTCA---GGTATCC----------------TCACCATCA-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47617864 243 + 47698779 TTAGGGTCCTTTTCTCCC----------CTGGGAACCAAGCACTCTCCAGAAACGTCTTCCAATGCTGCTAGGCC-----------------CTCCAGGCCTCCTT-GGGGAAGGAGCATGTGCCCATGT-------TTGGGGGGATCTGCTTCTCCAAGATCCAGGCTCAGAGCTGATCTCCTCATGGTTGCAGGGTC-----------TTTCTGTCACC---GGGCTCCTGTTTTGGGGCCACACGCGAGATCTTAT---AGCACTCAGCACCTTGGAGACC-TCACTGCCGAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=1039651.000000 s hg38.chr20_KI270870v1_alt 124755 105 + 183433 tccttcttaattccactgattgtacactttccagactgaagtca-ttgcttggtccaga--caggaacaaaGAAAGC-------CATGGCTGCTTGCCAGGATCTCCTCTTCTCT------- s panTro5.chr20 66450977 105 + 66533130 tccttcttaattccactgattgtacactttccagactgaagtca-ttgcttggtccaga--caggaacaaaGAAAGC-------CATGGCTGCTTGCCAGGATCTCCTCTTCTCT------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126024 105 + 62195757 tccttcttaattccactgattgtacactttccagactgaagtca-ttgcttggtccaga--caggaacaaaGAAAGC-------CATGGCTGCTTGCCAGGATCTCCTCTTCTCT------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515091 105 - 578057 tccttcttaattccactgattgtacactttccagactgaagtca-ttgcttagtccaga--caggaacaaaGAAAGC-------CATGGCTGCTTGCCAGGATCTCCTCTTCTCT------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037178 105 - 110113093 tccttcttaattccactgattgcacactttccagactgaagtca-ttgcttggtccaga--caggagcaaaGAAAGC-------CATGGCTGCTTGCCAGGACGTCCTCTTCTCT------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770139 81 - 92844088 TCCTTCTTAATTCCACCGATTGCACATTTTCCAGACTGAAGTCA-CTGCTTGGTCCAGA---------------------------------CTTGCTGGGACCTCCTCTTCTCT------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96436787 81 + 96509753 TCCTTCTTAATTCCACCGATTGCACATTTTCCAGACTGAAGTCA-CTGCTTGGTCCAGA---------------------------------CTTGCTGGGACCTCCTCTTCTCT------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907748 105 - 16982598 TCCTTCTTAATTCCACCGATTGCACATTTTCCAGACTGAAGTCA-CTGCTTGGTCCAGA--CAGGAGCAAAGAAAGC-------CATGGCTGCTTGCTGGGACCTCCTCTTCTCT------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711020 105 - 3785965 TCCTTCTTAATTCCACCGATTGCACATTTTCCAGACTGAAGTCA-CTGCTTGGTCCAGA--CAGGAGCAAAGAAAGC-------CATGGCTGCTTGCTGGGACCTCCTCTTCTCT------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289368 105 - 90373283 TCCTTCTTAATTCCACCGATTGCACATTTTCCAGACTGAAGTCA-CTGCTTGGTCCAGA--CAGGAGCAAAGAAAGC-------CATGGCTGCTTGCTGGGACCTCCTCTTCTCT------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103467 105 - 179258 TCCTTCTTAATTCCACCGATTGCACATTTTCCAGACTGAAGTCA-CTGCTTGGTCCAGA--CAGGAGCAAAGAAAGC-------CATGGCTGCTTGCTGGGACCTCCTCTTCTCT------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579537 105 - 5823884 TCCTTCTTAATTCCACCGATTGCACATTTTCCAGACTGAAGTCA-CTGCTTGGTCCAGA--CAGGAACAAAGAAAGC-------CATAGCTGCTTGCTGGGACCTCCTCTTCTCT------- i colAng1.NW_012114444v1 I 305 C 0 s calJac3.chrUn_GL286459 59335 105 + 372756 TCCTTCTTAATTTCACTGATTGCACACTTTCCAGATGGAAGTCA-TTGCTTGGTCCAGA--CAGGAACCAAGAAAGC-------CATGGCTGCTTGCCGGGACCACCTCTCCTCT------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295488 105 + 16356641 TCCTTCTTAATTCTACTGATTGCACACTTTCCAGATGGAAGTCA-CTGCTTGGTCCAGA--CAGGAACCGAGAAAGC-------CATGGCTGCTTGCCGGGACCTCCTCTCCCCT------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164797 104 + 1231380 TCC-TCTTAGTTCCGCTGATTGCACACTTTCCAGATGGAAGTCA-TTGCTTGGTCCAGA--CAGGAACCAAGAAAGC-------CATGGCTGCTTGTCGGGACCTCCTCTCCTCT------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697024 88 + 11732439 -----------------GATTGCACACTTTCCAGATGGAAGTCA-TTGCTTGGTCCAGA--CAGGAACCAAGAAAGC-------CATGACTGCTTGCCGGGACCTCTGCTCCTCT------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22858148 77 + 22939663 TCCCTCTTAATCTCGTCAACTGCACCCTTTCCAGACTGAAGTCACCTGCTTGGTCTAGG--CA------------------------------------GTACCCTCTTCTCTCT------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181804441 88 + 182113224 --TTTCCAAGTACCGCTGATC-------------ACTGAAGCCA-TTGCTCATTACAGA--CCAGAACAAGGAGAGC-------TAGGGC-ATTTGCT-GGAGCTCCTTCTTTCT------- i mm10.chr2 C 0 I 34 s canFam3.chr24 47618107 120 + 47698779 CCCTTCTTAATTCCAGGGACC-CATTCTTTTTAGATTTCAGTCA-TTGCTGGGCTCAGAGTCAAGAGCAAGCAGAGCTGGGGTGCAGAGGGGCCTCCCAGCCTCTCTTTTCCCCTTCTCTCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=926134.000000 s hg38.chr20_KI270870v1_alt 124860 89 + 183433 GAGCTGCC------AGGTTCAGAAGCTCCTCTGTG-CCTGTGTGGTCACCAGCATCTACC--ACCAGTCTTCCTGCC------CCTGTGCCTTCTATGCCAGTT s panTro5.chr20 66451082 89 + 66533130 GAGCTGCC------AGGTTCAGAAGCTCCTCTGTG-CCTGTGTGGTCACCAGCATCTACC--ACCAGTCTTCCTGCC------CCTGTGCCTTCTATGCCAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126129 89 + 62195757 GAGCTGCC------AGGTTCAGAAGCTCCTCTGTG-CCTGTGTGGTCACCAGCATCTACC--ACCAGTCTTCCTGCC------CCTGTGCCTTCTATGCCAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515196 89 - 578057 GAGCTACC------AGGTTCAGAAGCTCCTCTGTG-CCTGTGTGGTCACCAGCGTCTACC--ACCAGTCTTCCTGCC------CCTGTGCCTTCTATGCCAGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037283 89 - 110113093 GAGCTGCC------AGGTTCAGAAGCCCCTCTGTG-CCTGTGTGGTCACCAGCGTCTACC--ACCGGTCTTCCTGCC------TCTGTGCCTTCTATGCCAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770220 90 - 92844088 GAGCTGCC------AGGTTCAGAAACCCCTCTGTG-CCTGTGTGGTCACCGGCGTCTACC--ACCGGTCTTCCTGCC-----TCCTGTGCCTTCTATGCCAGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96436868 90 + 96509753 GAGCTGCC------AGGTTCAGAAACCCCTCTGTG-CCTGTGTGGTCACCGGCGTCTACC--ACCGGTCTTCCTGCC-----TCCTGTGCCTTCTATGCCAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907853 89 - 16982598 GAGCTGCC------AGGTTCAGAAA-CCCTCTGTG-CCTGTGTGGTCACCGGCGTCTACC--ACCTGTCTTCCTGCC-----TCCTGTGCCTTCTATGCCAGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711125 90 - 3785965 GAGCTGCC------AGGTTCAGAAACCCCTCTGTG-CCTGTGTGGTCACCAGCGTCTACC--ACCAGTCTTCCTGCC-----TCCTGTGCCTTCTATGCCAGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289473 90 - 90373283 GAGCTGCC------AGGTTCAGAAGCCCCTCTGTG-CCTGTGTGGGCACCGGCGTCTACC--ACCAGTCTTCCTGCC-----TCCTGTGCCTTCTATGCCAGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103572 90 - 179258 GAGCTGCC------AGGTTCAGAAACCCCTCTATG-CCTGTGTGGTCACCGGCATCTACC--ACCAGTCTTCCTGCC-----TCCTGTGCCTTCTATGCCAGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579642 90 - 5823884 GAGCTGCC------AGGTTCAGAAAGCCCTCTGTG-CCTGTGTGGTCACCAGCATCTACC--ACCAGTCTTCCTGCC-----TTCTGTGCCTTCTATGCCAGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59440 89 + 372756 GAGTTGCC------AGGTTCAGAAGCCCCTCTGTG-CCTTTGTGGTCCCCAGCATCTACC--ACCAGTCTTCCCGCC-----TCCT-TGCCTTCTGGGCCAGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295593 90 + 16356641 GAGCTGCC------AGGTTCAGAAGCCCCTCTGTG-CCTGTGTGGTCTTCAGCATCTACC--ACCAGTGTTCCCACC-----TCCTGTGCCTTCTGGGCCAGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164901 90 + 1231380 GAGCTGCT------AGGTTCAGAAGCCCCTCTGTG-CCTGTGTGGTCTCCAGCATCTACC--ACCAGTCTTCCCGCC-----TCCTGTGCCTTCTGGGCCAGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697112 90 + 11732439 GAGCTGCC------AGGTTCAGAAGCCCCTCTGTG-CCCGTGCGGTCACCACCATCTACC--ACCAGTCCTCCCGCC-----TCCTGTGCCTTCTGGGCCAGTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22858225 79 + 22939663 GAGCTGACTGGATAGGGTTCACA---CTTTCTGAACCCTGTGTGGTCACCAGCCTCTCTC--ATCAGTCTTTCTTCC---------CTGCCTC----------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47618227 84 + 47698779 GAGCTGAC------CAGCACAC--------------CTTGTGCGGCGGCCATTCCCCACCTGGCTGGTCTTCCTGCCCTGGCTCCTGTGCTGCCTGGGCTGCTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e mm10.chr2 181804529 34 + 182113224 I e micMur3.chr18 56874665 984 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=643846.000000 s hg38.chr20_KI270870v1_alt 124949 49 + 183433 TCTTCGTGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTATTCCAAGAGC s panTro5.chr20 66451171 49 + 66533130 TCTTCGTGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTATTCCAAGAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126218 49 + 62195757 TCTTCGTGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTATTCCAAGAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515285 49 - 578057 TCTTCGTGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTATTCCAAGAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037372 49 - 110113093 TCTTCATGCCG-TCTTTTGTGCATGTAAAATCCTGAAGTCTTCCAAGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770310 49 - 92844088 TCTTCATGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTCTTCCAAGAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96436958 49 + 96509753 TCTTCATGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTCTTCCAAGAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907942 49 - 16982598 GCTTCATGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTCTTCCAAGAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711215 49 - 3785965 TCTTCATGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTCTTCCAAGAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289563 49 - 90373283 TCTTCATGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTCTTCCAAGAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103662 49 - 179258 TCTTCATGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTCTTCCAAGAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579732 49 - 5823884 TCTTCATGCCA-TCTTTTGTGCATGTAAAATCCTGAAGTCTTCCAAGAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59529 49 + 372756 TCTTCATGCCA-TCTTTTGTGCTTGTAAAATCCTGAAGTCTTCCAAGAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295683 49 + 16356641 TCTTCATGCCA-TCTTTTGTGCTTGTAAAATCCTGAAGTCTTCCAAGAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1164991 49 + 1231380 TCTTCATGCCA-TCTTTTGTGCTTGTAAAATCCTGAAGTCTTCCAAGAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697202 49 + 11732439 TCTTCATGCCA-TCTTTTGTGCTTGTAAAATCCTGAAGTCTTCCAAGAGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56875649 49 + 57149010 TCTTCATGCCA-TCTTTTGTGCATGCAAGAACCTTAAGTCTTCCAAGAGC i micMur3.chr18 I 984 I 97 s otoGar3.GL873542 22858304 42 + 22939663 ------TGCCC-CTTTCCCTGTGTGTAA-AACCTGAAGTCTTCCAGGAGC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47618311 50 + 47698779 TCCTTCCGCTACCCTCTTGTGCATTTAAAACATGGAGCTCTTCTAAGGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e mm10.chr2 181804529 34 + 182113224 I e dasNov3.JH569290 256093 1293 - 397369 I a score=558485.000000 s hg38.chr20_KI270870v1_alt 124998 61 + 183433 ATTAGTGGCAGTGAACTGAATGCTTGCAGTAGCTTTTTCGTGGCTGTTGCTGACCCTTCCA s panTro5.chr20 66451220 61 + 66533130 ATTAGTGGCAGTGAACTGAATGCTTGCAGTAGCTTTTTCGTGGCTGTTGCTAACCCTTCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126267 61 + 62195757 ATTAGTGGCAGTGAACTGAATGCTTGCAGTAGCTTTTTCGTGGCTGTTGCTAACCCTTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515334 61 - 578057 ATTAGTGGCAGTGAACTGAATGCTTGCAGTAGCTTTTTCGTGGCTGTTGCTAACCCTTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037421 61 - 110113093 ATTAGTGGCAGCGAACGGAATGCTTGCAGTAGCTTTCTCGTGGCTGTTGTTAACCCTTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770359 61 - 92844088 ATTAGTGGCAGTGAACTGAGTGCTCACAGTAGCTTTTCCGTGTCTGTTATTAACGCTTCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437007 61 + 96509753 ATTAGTGGCAGTGAACTGAGTGCTCACAGTAGCTTTTCCGTGTCTGTTATTAACGCTTCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16907991 61 - 16982598 ATTAGTGGCAGTGAACTGAGTGCTCACAGTAGCTTTTCCGTGTCTGTTATTAACGCTTCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711264 61 - 3785965 ATTAGTGGCAGTGAACTGAGTGCTCACAGTAGCTTTTCTGTGTCTGTTATTAACGCTTCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289612 61 - 90373283 ATTAGTGGCAGTGAACTGAGTGCTCACAGTAGCTTTTCCGTGTCTGTTATTAATGCTTCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103711 61 - 179258 ATTAGTGGCAGTGAACTGAGTGCTCACAGTAGCTTTTCCGTGTCTGTTATTAACGCTTCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579781 61 - 5823884 ATTAGTGGGAGTGAACTGAGTGCTCGCAGTAGCTTTTCCGTGTCTGTTGTTAACCCTTCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59578 61 + 372756 GTTAGTGGCCGTGAACTGAGTGCTCGTAGTAGCCTTTTCATGGCTGTCATTAACCCGCCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295732 61 + 16356641 GTTAGTGGCCATGAACTGAGTGCTTGTAGTAGCCTTTTCATGGCTGTTGTTAACCAGCCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165040 61 + 1231380 GTTAGTGGCCATGAACGGAGTGCTTGTAGTAGCCTTTTCATGGCTGTTGTTAACCCACCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697251 45 + 11732439 GTCAGTGGCCATGAACTGAGTGCTTGTAGTAGCCTTTTCATGGCT---------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22858346 60 + 22939663 TCCAGAAACAGTGAACTGAATGTTTGCTGTGGCCTTTTCATGCCTGTTAC-AACCATCTCA i otoGar3.GL873542 C 0 I 301 s canFam3.chr24 47618361 54 + 47698779 TTCCGCGACAGCGAACTGAAGGCCTGTAGTGCCTT-----CAACCGTTTCGGCCCCTCC-- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e mm10.chr2 181804529 34 + 182113224 I e micMur3.chr18 56875698 97 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=304244.000000 s hg38.chr20_KI270870v1_alt 125059 35 + 183433 ACAGTTCCTTGAGGGTCCACCTCAACACAGCTTTA s panTro5.chr20 66451281 35 + 66533130 ACAGTTCCTTGAGGGTCCACCTCAACACAGCTTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126328 35 + 62195757 ACAGTTCCTTGAGGGTCCACCTCAACACAGCTTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515395 35 - 578057 ACAGTTCCTTGAGGGTCCACCTCAACACAGCTTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037482 35 - 110113093 ACAGTTCCTTGAGGGTCCACCTCAACACAGCTTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770420 34 - 92844088 GCAGTT-CTTGAGGGTTCACCTCAACAGAGCTTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437068 34 + 96509753 GCAGTT-CTTGAGGGTTCACCTCAACAGAGCTTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908052 34 - 16982598 GCAGTT-CTTGAGGGTTCACCTCAACAGAGCTTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711325 34 - 3785965 GCAGTT-CTTGAGGGTTCACCTCAACACAGCTTTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289673 34 - 90373283 GCAGTT-CTTGAGGGTTCACCTCAACACAGCTTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103772 34 - 179258 GCAGTT-CTTGAGGGTTCACCTCAACACAGCTTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579842 34 - 5823884 GCAGTT-CTTGAGGGTTCACCTCAACACAGCTTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59639 35 + 372756 GCAGTTCCTTGAGGGTCCACGTCAACATGGCTTTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295793 35 + 16356641 GCAGTTCCTTGAGGGTCCACGTCAGCACGACTTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165101 35 + 1231380 GCAGTTCCTTGAGGGTCCACGTCAACACGGCTTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697296 32 + 11732439 ---GTTCCTTGAGGGTCCACGTCAACACGGCTTTA i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47618415 23 + 47698779 -----------AGGGCTCCTCTCAATTGACCTCA- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1870373 1027 - 2029793 I e mm10.chr2 181804529 34 + 182113224 I e micMur3.chr18 56875698 97 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e otoGar3.GL873542 22858406 301 + 22939663 I a score=13923.000000 s hg38.chr20_KI270870v1_alt 125094 1 + 183433 A s panTro5.chr20 66451316 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126363 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515430 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037517 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770454 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437102 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908086 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711359 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289707 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103806 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579876 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59674 1 + 372756 A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295828 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165136 1 + 1231380 A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697328 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1871400 1 - 2029793 A i proCoq1.NW_012150197v1 I 1027 C 0 s canFam3.chr24 47618438 1 + 47698779 A i canFam3.chr24 C 0 C 0 e mm10.chr2 181804529 34 + 182113224 I e micMur3.chr18 56875698 97 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e otoGar3.GL873542 22858406 301 + 22939663 I a score=135513.000000 s hg38.chr20_KI270870v1_alt 125095 11 + 183433 -----GAAGAGGGCAG s panTro5.chr20 66451317 11 + 66533130 -----GAAGAGGGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126364 11 + 62195757 -----GAAGAGGGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515431 11 - 578057 -----GAAGAGGGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037518 11 - 110113093 -----GAAGAGGGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770455 11 - 92844088 -----GAAGAGGGCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437103 11 + 96509753 -----GAAGAGGGCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908087 11 - 16982598 -----GAAGAGGGCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711360 11 - 3785965 -----GAAGAGGGCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289708 11 - 90373283 -----GAAGAGGGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103807 11 - 179258 -----GAAGAGGGCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579877 11 - 5823884 -----GAAGAGGGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59675 11 + 372756 -----GAAGAGGACAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295829 11 + 16356641 -----GAAGAGGATAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165137 11 + 1231380 -----GAAGAGGACAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697329 11 + 11732439 -----GAAGAGGAGAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1871401 11 - 2029793 -----GAAGAGAGCAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22858707 11 + 22939663 -----GAAGACAACAG i otoGar3.GL873542 I 301 C 0 s canFam3.chr24 47618439 11 + 47698779 GCCGAGAAGAG----- i canFam3.chr24 C 0 C 0 e mm10.chr2 181804529 34 + 182113224 I e micMur3.chr18 56875698 97 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=220786.000000 s hg38.chr20_KI270870v1_alt 125106 13 + 183433 CTGAGGGCTGAGT s panTro5.chr20 66451328 13 + 66533130 CTGAGGGCTGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126375 13 + 62195757 CTGAGGGCTGAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515442 13 - 578057 CTGAGGGCTGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037529 13 - 110113093 CTGAGGGCTGAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770466 13 - 92844088 CTGAGGGCTGAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437114 13 + 96509753 CTGAGGGCTGAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908098 13 - 16982598 CTGAGGGCTGAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711371 13 - 3785965 CTGAGGGCTGAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289719 13 - 90373283 CTGAGGGCTGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103818 13 - 179258 CTGAGGGCTGAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579888 13 - 5823884 CTGAGGGCTGAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59686 13 + 372756 CTGAGGGCTGAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295840 13 + 16356641 CTGAGGGCTGAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165148 13 + 1231380 CTGAGGGCTGAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697340 13 + 11732439 CTGAGGGCTGAGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56875795 13 + 57149010 CTGAGGGCTGAGT i micMur3.chr18 I 97 C 0 s proCoq1.NW_012150197v1 1871412 13 - 2029793 CTGAGGGCTGAGT i proCoq1.NW_012150197v1 C 0 I 19 s otoGar3.GL873542 22858718 13 + 22939663 CTGAGGGCTATAT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47618450 13 + 47698779 CAGAGGGCTGAAC i canFam3.chr24 C 0 C 0 e mm10.chr2 181804529 34 + 182113224 I e dasNov3.JH569290 256093 1293 - 397369 I a score=361330.000000 s hg38.chr20_KI270870v1_alt 125119 30 + 183433 CCCTGGCTGAATGAAGAAGGGT-CAGGCCTG s panTro5.chr20 66451341 30 + 66533130 CCCTGGCTGAATGAAGAAGGGT-CAGGCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126388 30 + 62195757 CCCTGGCTGAATGAAGAAGGGT-CAGGCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515455 30 - 578057 CCCTGGCTGAATGAAGAAGGGT-CAGGCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037542 30 - 110113093 CCCCGGCTGAATGAAGAAGGGT-CAGGCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770479 30 - 92844088 CCCTGGCTGGACGAAGAAGGGT-CAGGCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437127 30 + 96509753 CCCTGGCTGAACGAAGAAGGGT-CAGGCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908111 30 - 16982598 CCCTGGCTAAACGAAGAAGGGT-CAGGCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711384 30 - 3785965 CCCTGGCTGAACGAAGAAGGGT-CAGGCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289732 30 - 90373283 CCCTGGCTGAACGAAGAAGGGT-CAGGCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103831 30 - 179258 CCCTGGCTGAACGAAGAAGGGT-CAGGCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579901 30 - 5823884 CCCTGGCTGAATGAAGAAGGGT-CAGGCCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59699 30 + 372756 CCCTGGCTGAGTGAAGAAGGGT-CAGGCCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295853 30 + 16356641 CCCTGGCTGAGTGAAGAAGGGT-CAGGCCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165161 30 + 1231380 CCCCGGCTGAGTGAAGAAGGAT-CAGGCCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697353 30 + 11732439 CCCTGGCTGGGTGAAGAAGGGT-CAGGCCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56875808 30 + 57149010 CCCTGGCTGAGTGGAGAGCCAG-TAGGACCT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22858731 31 + 22939663 CCCTGGCTGAGTGAATAGTTGGCCAGGACCT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47618463 26 + 47698779 CCCTGGCCAGG----GAAGAGC-TGAGTCGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1871425 19 - 2029793 I e mm10.chr2 181804529 34 + 182113224 I e dasNov3.JH569290 256093 1293 - 397369 I a score=1095182.000000 s hg38.chr20_KI270870v1_alt 125149 88 + 183433 ----GCCCTGAGGCCACTCCTCAGAAATGCACCTGATACAACT-------------AGCGTCTCCTGTAGATTCCTCAGCTTCCTCCTTGCTGGGGAGTTCTAGG------------ s panTro5.chr20 66451371 88 + 66533130 ----GCCCTGAGGCCACTCCTCAGAAATGCACCTGATACAACT-------------AGCGTCTCCTGTAGATTCCTCAGCTTCCTCCTTGCTGGGGAGTTCTAGG------------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126418 88 + 62195757 ----GCCCTGAGGCCACTCCTCAGAAATGCACCTGATACAACT-------------AGCGTCTCCTGTAGATTCCTCAGCTTCCTCCTTGCTGGGGAGTTCTAGG------------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515485 88 - 578057 ----GCCCTGAGGCCACTCCTCAGAAATGCACCTGATACAACT-------------AGCGTCTCCTGTAGATTCCTCAGCTTCCTCCTTGCTGGGGAGTTCTAGG------------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037572 88 - 110113093 ----GCCCTGAGGCCACTCCTCAGAAATGCACCTGATACAACT-------------AGCGTCTGCTGTAGATTCCTCAACTTCCTCCTTGCTGGGGAGTTCTAGG------------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770509 87 - 92844088 ----GCCCTGAGACCACTCCTCAG-AATGCACCTGATACAACT-------------AGTGTCTCCTGTAGATTCCTCAACTTCCTCCTTGCTGGGGAGTTTTGGC------------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437157 87 + 96509753 ----GCCCTGAGACCACTCCTCAGAAATGCACCTGATACAACT-------------AGTGTCTCCTGTAGATTCCTCAACTTCCTCCTTGCTGGGGA-TTTTGGC------------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908141 88 - 16982598 ----GCCCTGAGACCACTCCTCAGAAATGCACCTGATACAACT-------------AGCGTCTCCTGTAGATTCCTCAACTTCCTCCTTGCTGGGGAGTTTTGGC------------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711414 88 - 3785965 ----GCCCTGAGACCACTCCTCAGAAATGCACCTGATACAACT-------------AGTGTCTCCTGTAGATTCCTCAACTTCCTCCTTGCTGGGGAGTTCTAGC------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289762 88 - 90373283 ----GCCCTGAGACCACTCCTCAGAAATGTACCTGATACAACT-------------AGTGTCTCCTGTAGATTCCTCAACTTCCTCCTTGCTGGGGAGTTCTAGC------------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103861 88 - 179258 ----GCCCTGAGACCACTCCTCAGAAATGCACCTGATACAACT-------------AGTGTCTCCTGTAGATTCCTCAACTTCCTCCTTGCTGGGGAGTTCTAGC------------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5579931 88 - 5823884 ----GCCCTGAGACCACCCCTCAGAAATGTACCTGATACAACT-------------AGCATCTCCTGTAGAGTCCTCAACTTCCTCCTTGTTGGGGAGTACTAGC------------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59729 100 + 372756 ----GCCCTAAGCCCACTCCTCAGAAATGTACCTGACATGGCTCCTCAGTCTCGTGGTTGTCTCCT-CAGATTCCTCGACTTCCTCCTCACTGGGGAGTTCTAGG------------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295883 101 + 16356641 ----GCCCTGAGGCCACTCCTCAGAAAGACACCTGACACGGCTCCTCGGTCTAGTGGTTGCCTCCTCCAGATCCCTCAACTTCCTCCTCGCTGGGGAGTTCTAGG------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165191 101 + 1231380 ----GCCCTGAGGCCACTCTTCAGAAATGCGCCTGACACAGCTCCTCAGTCTAGTGGTTGCCTCCTCCAGATTCCTCAGCTTCCTCCTCGCTGGGGAGTTCTAGG------------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697383 99 + 11732439 ----GCCCTGAGGCCACTCCTCAGAAACGCACCTGAC--GGCTCCTCAGTCCAGTGGTTGCCTCCTCCAGATTCCTCAACTTCCTCCTTGCTGGGGAGTTCTAGG------------ i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56875838 88 + 57149010 ----GCCCTGAGGTTGCTCCTCAGAAATGCACCTGACCCAACC-------------AGTATCCCCTCTAGCTTCCCCAACTGCCTCCCTGCTGGGGAGTTCTAGG------------ i micMur3.chr18 C 0 I 177 s proCoq1.NW_012150197v1 1871444 87 - 2029793 ----GCCCTGAGGTTGCTCCTCAGAAATGCACCTGAGCCAACC-------------AGTGTCCCCTCTA-CTTCCCCAACTCCCTCCCTGCTGGGGAGTTCTAGG------------ i proCoq1.NW_012150197v1 I 19 I 90 s otoGar3.GL873542 22858762 88 + 22939663 ----GCCCTGGGGCTGCTCCTCAGAAATGCACCTGCCACAACC-------------AGTGTCCCCTCTAGATTCCCCAACTCCCTCTTTGGTGCAGTGTTCTAGG------------ i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47618489 94 + 47698779 GTCCTCCCGGAACCTGGTTCTCAGAAGCACACC-----------------------CGTGTCCTCTCTGGATGCCCCACCTCCCTCCCCCCTGGGGAGTTGTGTCATTCCATCAGGA i canFam3.chr24 C 0 C 0 e mm10.chr2 181804529 34 + 182113224 I e dasNov3.JH569290 256093 1293 - 397369 I a score=101395.000000 s hg38.chr20_KI270870v1_alt 125237 10 + 183433 TTATGCTGCC s panTro5.chr20 66451459 10 + 66533130 TTATGCTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126506 10 + 62195757 TTATGCTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515573 10 - 578057 TTATGCTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037660 10 - 110113093 TTATGCTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770596 10 - 92844088 TTATTCTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437244 10 + 96509753 TTATTCTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908229 10 - 16982598 TTATTCTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711502 10 - 3785965 TTATTCTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289850 10 - 90373283 TTATTCTGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103949 10 - 179258 TTATTCTGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580019 10 - 5823884 TTATTCTGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59829 10 + 372756 TTACTCTGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16295984 10 + 16356641 TGATTCTGCC i saiBol1.JH378156 C 0 I 240 s cebCap1.NW_016107870v1 1165292 10 + 1231380 TGATTCTGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697482 10 + 11732439 TTATTCTGCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22858850 10 + 22939663 ATATTCTGCT i otoGar3.GL873542 C 0 I 11 s canFam3.chr24 47618583 10 + 47698779 GAGTGCTGTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1871531 90 - 2029793 I e mm10.chr2 181804529 34 + 182113224 I e micMur3.chr18 56875926 177 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=7847.000000 s hg38.chr20_KI270870v1_alt 125247 1 + 183433 T s panTro5.chr20 66451469 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126516 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515583 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037670 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770606 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437254 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908239 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711512 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289860 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103959 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580029 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59839 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22858871 1 + 22939663 T i otoGar3.GL873542 I 11 C 0 s canFam3.chr24 47618593 1 + 47698779 T i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1871531 90 - 2029793 I e mm10.chr2 181804529 34 + 182113224 I e micMur3.chr18 56875926 177 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e saiBol1.JH378156 16295994 240 + 16356641 I e cebCap1.NW_016107870v1 1165302 0 + 1231380 C e aotNan1.NW_018500483v1 2697492 0 + 11732439 C a score=163605.000000 s hg38.chr20_KI270870v1_alt 125248 14 + 183433 TGGAGTGTCTTGCT s panTro5.chr20 66451470 14 + 66533130 TGGAGTGTCTTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126517 14 + 62195757 TGGAGTGTCTTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515584 14 - 578057 TGGAGTGTCTTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037671 14 - 110113093 TGGAGTGTCTTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770607 14 - 92844088 TGGAGTGTCTTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437255 14 + 96509753 TGGAGTGTCTTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908240 14 - 16982598 TGGAGTGTCTTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711513 14 - 3785965 TGGAGTGTCTTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289861 14 - 90373283 TGGAGTGTCTTGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103960 14 - 179258 TGGAGTGTCTTGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580030 14 - 5823884 TGGAGTGTCTTGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59840 14 + 372756 TGAAGGGGCTCGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296234 14 + 16356641 TGGAGTGGCTTGCT i saiBol1.JH378156 I 240 C 0 s cebCap1.NW_016107870v1 1165302 14 + 1231380 TGGAGTGGCTTGCT i cebCap1.NW_016107870v1 C 0 I 154 s aotNan1.NW_018500483v1 2697492 14 + 11732439 TGGAGGGGCTTGCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22858872 14 + 22939663 TAGAGTGGCTTGCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47618594 13 + 47698779 -GGGGCGGCTGGCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1871531 90 - 2029793 I e mm10.chr2 181804529 34 + 182113224 I e micMur3.chr18 56875926 177 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=210215.000000 s hg38.chr20_KI270870v1_alt 125262 35 + 183433 ATTGTCCTGGGCTATGCTACTCTTTGGCC--CTGCCT s panTro5.chr20 66451484 35 + 66533130 ATTGTCCTGGGCTATGCTACTCTTTGGCC--CTGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126531 35 + 62195757 ATTGTCCTGGGCTATGCTACTCTTTGGCC--CTGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515598 35 - 578057 ATTATCCTGGGCTATGCTACTCTTTGGCC--CTGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037685 35 - 110113093 GTTGTCCTGGGCTGTGCTGCTCTTTGGCC--CTGCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770621 36 - 92844088 GTGGTCCTGGGCTATGCTACTGTTTGCCC-TCTGCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437269 36 + 96509753 GTGGTCCTGGGCTATGCTACTGTTTGCCC-TCTGCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908254 36 - 16982598 GTGGTCCTGGGCTATGCTACTGTTTGCCC-TCTGCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711527 36 - 3785965 GTTGTCCTGGGCTATGCTACTGTTTGCCC-TCTGCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289875 36 - 90373283 GTTGTCCTGGGCTCTGCTACTGTTTGCCC-TCTGCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 103974 36 - 179258 GTTGTCCTGGGCTATGCTACTGTTTGCCC-TCTGCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580044 36 - 5823884 GTTGTCCTGGGCTATGCTACTGTTTGCCC-TCTGCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59854 35 + 372756 GCTGGCCTGGGCTTCGCCAT-GTATGGCT-CCCGCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296248 34 + 16356641 GCTGGCCTGGGCTTCGTGAC-GT-TGGCT-CCCGCCC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2697506 35 + 11732439 GCTGGCCTGGGCTTCGCTAC-ATGTGTCT-CCCGCCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22858886 32 + 22939663 ATCACCCTACGCTGTGTTGCTATTTGGGT-----CCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47618607 36 + 47698779 CCTGTCCCAGA-GACGCTCCTGCAGGGTTGCCCGCCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1871531 90 - 2029793 I e mm10.chr2 181804529 34 + 182113224 I e micMur3.chr18 56875926 177 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e cebCap1.NW_016107870v1 1165316 154 + 1231380 I a score=14125.000000 s hg38.chr20_KI270870v1_alt 125297 4 + 183433 --GATA s panTro5.chr20 66451519 4 + 66533130 --GATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126566 4 + 62195757 --GATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515633 4 - 578057 --GATA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037720 4 - 110113093 --GATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770657 4 - 92844088 --GGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437305 4 + 96509753 --GGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908290 4 - 16982598 --GGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711563 4 - 3785965 --GGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289911 4 - 90373283 --GGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104010 4 - 179258 --GGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580080 4 - 5823884 --GGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59889 4 + 372756 --AGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296282 4 + 16356641 --AGTC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2697541 4 + 11732439 --AGTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22858918 4 + 22939663 --TGTG i otoGar3.GL873542 C 0 I 5 s mm10.chr2 181804563 4 + 182113224 --GAAA i mm10.chr2 I 34 C 0 s canFam3.chr24 47618643 4 + 47698779 AGGG-- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1871531 90 - 2029793 I e micMur3.chr18 56875926 177 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I e cebCap1.NW_016107870v1 1165316 154 + 1231380 I a score=126560.000000 s hg38.chr20_KI270870v1_alt 125301 10 + 183433 CTCACTCCAG s panTro5.chr20 66451523 10 + 66533130 CTCACTCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126570 10 + 62195757 CTCACTCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515637 10 - 578057 CTCACTCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037724 10 - 110113093 CTCACTCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770661 10 - 92844088 CTCACTCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437309 10 + 96509753 CTCACTCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908294 10 - 16982598 CTCACTCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711567 10 - 3785965 CTCACTCCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289915 10 - 90373283 CTCACTCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104014 10 - 179258 CTCACTCCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580084 10 - 5823884 CTCACTCCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59893 10 + 372756 CTCACTCCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296286 10 + 16356641 CTCACTCTAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165470 10 + 1231380 CTCACTCCAG i cebCap1.NW_016107870v1 I 154 C 0 s aotNan1.NW_018500483v1 2697545 10 + 11732439 CTCACTCCAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22858927 7 + 22939663 CTTA---TAG i otoGar3.GL873542 I 5 I 3 s mm10.chr2 181804567 10 + 182113224 CTCACTGTTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47618647 10 + 47698779 CTCATTCTAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1871531 90 - 2029793 I e micMur3.chr18 56875926 177 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=1045992.000000 s hg38.chr20_KI270870v1_alt 125311 81 + 183433 TTGCAGCTGAGCTGTTTGAAACCTGCTCTCCTAAGTTCTGGGG-AAAATCTTAGG----CCCTCCTCTATC-TGATGCTGTCAGCAG s panTro5.chr20 66451533 81 + 66533130 TTGCAGCTGAGCTGTTTGAAACCTGCTCTCCTACGTTCTGGGG-AAAATCTTAGG----CCCTCCTCTAGC-TGATGCTGTCAGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126580 81 + 62195757 TTGCAGCTGAGCTGTTTGAAACCTGCTCTCCTACGTTCTGGGG-AAAATCTTAGG----CCCTCCTCTAGC-TGATGCTGTCAGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515647 81 - 578057 TTGTAGCTGAGCTGTTTGAAACCTGCTCTCCTAAGTTCTGGGG-AAAATCTTAGG----CCCTCCTCTAGC-TGATGCTGTCAGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037734 81 - 110113093 TTGTAGCTGAGCTGTTTGAAATCTTCTCTCCTAAGTTCTGGGG-AAAATCTTAGG----CCCTTCTCTAGC-AGATGCTGTCAGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770671 81 - 92844088 TTGTAGCTGAGCTGTTTGAAACCTGCTCTCCTACGTTCTGGGG-AAAATCTCGGG----CCCTCCTCTAGC-TGATGCTGTCAGCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437319 81 + 96509753 TTGTAGCTGAGCTGTTTGAAACCTGCTCTCCTACGTTCTGGGG-AAAATCTCGGG----CCCTCCTCTAGC-TGATGCTGTCAGCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908304 81 - 16982598 TTGTAGCTGAGCTGTTTGAAACCTGCTCTCCTACGTTCTGGGG-AAAATCTCGGG----CCCTCCTCTAGC-TGATGCTGTCAGCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711577 81 - 3785965 TTGTAGCTGAGCTGTTTGAAACCTGGTCTCCTACGTTCTGGGG-AAAATCTCGGG----CCCTCCTCTAGC-TGATGCTGTCAGCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90289925 81 - 90373283 TTGTAGCTGAGCTGTTTGAAACCTGCTCTCCTACGTTCTGGGG-AAAATCTCGGG----CCCTCCTCTAGC-TGATGCTGTCAGCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104024 81 - 179258 TTGTAGCTGAGCTGTTTGAAACCTGCTCTCCTACGTTCTGGGG-AAAATCTCGGG----CCCTCCTCTAGC-TGATGCTGTCAGCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580094 80 - 5823884 TTGTAGCTGAGCTGTTTGAAACCTGCTCTCCTAAGTTCTGGGG-AAAATCT-GGG----CCCTCCTCTAGC-TGATGCTGTCAGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59903 85 + 372756 CTGTAGCTGAGCTGTTTGAAACCTGCTCTCCTAAGTTCTGGGG-AAAATCTGAGGTCCTCCCACCTCTAGC-TGATGCCATCAGCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296296 85 + 16356641 TTGTAGCTGAGCTGTTTGAAACCTGCTCTTCTAAGTTCTGGGG-AATATCTTAGGTCTGCCCACCTCTAGC-TGATGCCATCAGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165480 85 + 1231380 TTGCAGCTGAGCTGTTTGAAACCTGCTCTCCTAAGTTCTGGGG-AAAATCTTAGGTCCTCCCACCTCTAGC-TGATGCCATCAGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697555 84 + 11732439 TTGTAGCTGAGCCCTTTGAAACCTGCTCTCCTAAGTT-TGGGG-AAAGCCTTAGGTCCTCCCACCTCTAGC-TGATGCCATCAGCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1871621 85 - 2029793 ttgtagctgagttgtttgaaacctgctttcctaagttctggga-AAAGTCTCAGGTCCTCCCACCGCTGGT-TAACGCTGTCAGCCT i proCoq1.NW_012150197v1 I 90 I 3 s otoGar3.GL873542 22858937 85 + 22939663 TTGTAGCTGACTTGTTTGAACCCTTCTTTCTTAAATTCTGGGG-GAAATCTCAGGTCCTCCCACCTCTGGG-TAGTGCTGTCAGCAT i otoGar3.GL873542 I 3 I 2 s mm10.chr2 181804577 81 + 182113224 -TGTAGCTGAGCT-CGTGGAACTTGCTCTCTTACATTTTGGAG-GAAGTTCAAGCT---TGCTACTTTGGCATAATACTAGCATAAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47618657 85 + 47698779 TAGTAGCGGAGGTGT-TGGGACCTGCTCTCCTAAGCTCTGGGGCAGAGTCTCAGGCCCTCCGTCCTCTGGC-TAGTGCTGTCTGCAA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56875926 177 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=535839.000000 s hg38.chr20_KI270870v1_alt 125392 47 + 183433 ---GACAGGCCATTGATTATTTGAGGGTCCTATTGCTTCCTCCCTGCAGG s panTro5.chr20 66451614 47 + 66533130 ---GACAGGCCATTGATTATTTGAGGGTCCTATTGCTTCCTCCCTGCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126661 47 + 62195757 ---GACAGGCCATTGATTATTTGAGGGTCCTATTGCTTCCTCCCTGCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515728 47 - 578057 ---GACAGGCCATTGATTATTTGAGGGTCCTATTGCTTCCTCCCTGCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037815 42 - 110113093 ---GACAGGCCACTG-----CTGTGGGTCCTATTGCTTCCTCCCTGCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770752 46 - 92844088 ---GACAGG-CATTGATTATTTGAGGGCCCTATTGCTTCCTTCCTGCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437400 46 + 96509753 ---GACAGG-CATTGATTATTTGAGGGCCCTATTGCTTCCTTCCTGCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908385 46 - 16982598 ---GACAGG-CATTGATTATTTGAGGGCCCTATTGCTTCCTTCCTGCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711658 46 - 3785965 ---GACAGG-CATTGATTATTTGAGGGCCCTATTGCTTCCTTCCTGCAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290006 46 - 90373283 ---GACAGG-CATTGATTCTTTGAGGGCCCTGTTGCTTCCTTCCTGCAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104105 46 - 179258 ---GACAGG-CATTTATTATTTGAGGGCCCTATTGCTTCCTTCCTGCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580174 47 - 5823884 ---GACAGGCCATTGATTATTTGAGGGCCCTATTGCTTCCTTCCTTCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 59988 36 + 372756 ---AACAGG-----------CCGAGAGTCCTATTGCTTCCGCACTGTAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296381 47 + 16356641 ---AACAGGCCACTGATTATCCGAGAGTCCTACTGCTTCTGCGCTGTAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165565 46 + 1231380 ---AACAGGCCATTGATTA-TCGAGGGTCCTATTGCTTCCATGCTGTAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697639 47 + 11732439 ---AACAGGCCATTGATCATCCGAGGGTCCTGCTGCTTCCACGCCGTAGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56876103 46 + 57149010 ---GACAGGCCATTGTTTCTTTGAGGTTCC-ATTGCTTCCTCCCTGCAGG i micMur3.chr18 I 177 C 0 s proCoq1.NW_012150197v1 1871709 47 - 2029793 ---GACAGTCCCTTGTTTCTTTGAGGTTCCAATTGCTTCCTCCCTGCAGG i proCoq1.NW_012150197v1 I 3 I 195 s otoGar3.GL873542 22859024 46 + 22939663 ---GGCAGGCCACAGTTTCTTTGAGGCTCCTATTACTTCCT-CCTGCAGG i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181804658 46 + 182113224 ---AACACATTATTATTTCTTTCAGG-TTCTATTGTTTCCTCCTTATAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47618742 50 + 47698779 GGACACAGGCCATCTTGTCCTCAGCGCTCCCGTTGCTCCCTCCCTGCAGC i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 256093 1293 - 397369 I a score=74233.000000 s hg38.chr20_KI270870v1_alt 125439 7 + 183433 CCATTCT s panTro5.chr20 66451661 7 + 66533130 CCATTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126708 7 + 62195757 CCATTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515775 7 - 578057 CCATTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037857 7 - 110113093 CAATTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770798 7 - 92844088 CAATTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437446 7 + 96509753 CAATTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908431 7 - 16982598 CAATTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711704 7 - 3785965 CAATTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290052 7 - 90373283 CAATTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104151 7 - 179258 CAATTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580221 7 - 5823884 CAATTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60024 7 + 372756 CAATTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296428 7 + 16356641 CAACTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165611 7 + 1231380 CAACTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697686 7 + 11732439 CGATTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56876149 7 + 57149010 CAATTCT i micMur3.chr18 C 0 I 668 s mm10.chr2 181804704 7 + 182113224 CAACTGA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1871756 195 - 2029793 I e canFam3.chr24 47618792 0 + 47698779 C e dasNov3.JH569290 256093 1293 - 397369 I e otoGar3.GL873542 22859070 0 + 22939663 C a score=866797.000000 s hg38.chr20_KI270870v1_alt 125446 84 + 183433 TCACCGGCCTGCTCTGGGAGCCCTTGACCCTGGGAGGTGGAACTCTGCCCAG-CTTTAGTGGTGGAATAT--GCAGGGGTAGTGTCT s panTro5.chr20 66451668 84 + 66533130 TCACGGGCCTGCTCTGGGAGCCCTTGACCCTGGGAGGTGGAACTCTGCCCAG-CTTTAGTGGTGGAATAT--GCAGGGGTAGTGTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126715 84 + 62195757 TCACGGGCCTGCTCTGGGAGCCCTTGACCCTGGGAGGTGGAACTCTGCCCAG-CTTTAGTGGTGGAATAT--GCAGGGGTAGTGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515782 84 - 578057 TCACGGGCCTGCTCTGGGAGCCCTTGACCCTGGGAGGTGGAACTCTGCCCAG-CTTTAGTGGTGGAATAT--GCAGGGGTAGTGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037864 84 - 110113093 TCACGGGCCTGCTCTGGGAGCCCTTGACCCTGGGAGGTGGAACTCTGCCCAG-CTTTAGTGGTGGAATAT--GCAGGGGGAGTGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770805 82 - 92844088 TCATGGGCCTGCTCTGGGAGCCCTTGGCCCTGGGAGGTGGAA--CTGCCCAG-CTTTAATGGTGGAATAT--GCAGGGGGAGTATCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437453 82 + 96509753 TCATGGGCCTGCTCTGGGAGCCCTTGGCCCTGGGAGGTGGAA--CTGCCCAG-CTTTAATGGTGGAATAT--GCAGGGGGAGTATCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908438 82 - 16982598 TCATGGGCCTGCTCTGGGAGCCCTTGGCCCTGGGAGGTGGAA--CTGCCCAG-CTTTAATGGTGGAATAT--GCAGGGGGAGTATCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711711 82 - 3785965 TCATGGGCCTGCTCTGGGAGCCCTTGGCCCTGGGAGGTGGAA--CTGCCCAG-CTTTAATGGTGGAATAT--GCAGGGGGAGTATCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290059 82 - 90373283 TCGTGGGCCTGCTCTGGGAGCCCTTGGTCCTGGGAGGTGGAA--CTGCCTAG-CTTTAATGGTGGAATAT--GCAGGGGGAGTATCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104158 82 - 179258 TCATGGGCCTGCTCTGGGAGCCCTTGGCCCTGGGAGGTGGAA--CTGCCCAG-CTTTAATGGTGGAATAT--GCAGGGGGAGTATCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580228 84 - 5823884 TCATGGGCCTGCTCTGGGAGCCCTTGGCCCTGGGAGGTGGAACTCTGCCCAG-CTTTAATGGTGGAATAC--GCAGGGGGAGTATCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60031 83 + 372756 TCACAGGACTGCTCTGAGAGCCCTTGACCCTGGGAGGTGGAACTCTGCCCAG-CTTCAGTGGCAGACAGT--GCAGGCG-AGTGCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296435 83 + 16356641 TCACAGGCCTGCTCTGAGAGCCCTTGACCCTGGGAGGTGGAACTCTGCCCAG-CTGCAGTGGCGGACAGT--GCAGGGG-AGTGCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165618 83 + 1231380 TCACAGGCCTGCTCTGAGAGCCCTTGACCCTGGGAGGTGGAACTCTGCCCAG-CTTCAGTGGCGGACAGT--GCAGGGG-AGTGCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697693 82 + 11732439 TCACA-GCCTGCTCTGAGAGCCCTTGACCCTGGGAGGTGGAACTCTGCCCAG-CTTCAGTGGCCGACAGT--GCAGGGG-AGTGCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22859070 85 + 22939663 TCACATGCCTGCCCGGGGAGCTCTTCACCCTGGTAGGTGAAATTCTGATGAGACTCTAGTGGTGGGCTAT--GTGTGGCGGGAGTAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181804711 87 + 182113224 TAATGGGCCTATCCTAGGGTCCCTTAATTCTGGGAGGCAGAATTTTGACCAAACATTAGGGGCAGGATTTTGGAAGTGTGTGTATCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47618792 63 + 47698779 ------------------AGCTCTTCCTCCTGTGGATCAGGCCCCAGCTTCC-CTTCAGTGGTGG---GT--CCTGGGGGAGGGTCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1871756 195 - 2029793 I e micMur3.chr18 56876156 668 + 57149010 I e dasNov3.JH569290 256093 1293 - 397369 I a score=1021622.000000 s hg38.chr20_KI270870v1_alt 125530 92 + 183433 TCCTGAGTCTCCTTCCTCACCAGACGCTGTGAGGCCCCTGCCTGGGCTGCAGATTGGGGTTGGGG--AGGGTGGCACGGGATCCCCAGGTCCCA s panTro5.chr20 66451752 92 + 66533130 TCCTGAGTCTCCTTCCTCACCAGACGCTGTGAGGCCCCTGCCTGGGCTGCAGATTGGGGTTGGGG--AGGGTGGCACGGGATCCCCAGGTCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126799 92 + 62195757 TCCTGAGTCTCCTTCCTCACCAGACGCTGTGAGGCCCCTGCCTGGGCTGCAGATTGGGGTTGGGG--AGGGTGGCACGGGATCCCCAGGTCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515866 92 - 578057 TCCTGAGTCTCCTTCCTCACCAGACGCTGTGAGGCCCCTGCCTGGGCTGCAGATTGGGGTTGGGG--AGGGTGGCACGGGATCCCCAGGTCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110037948 92 - 110113093 TCCTGAGTCTCCTTCCTCACCAGATGCTGTGAGGCCCCTGCCTGGTCTGTGGATTGGGGTTGGGG--AGGGTGGCACGGGATCCCCAGGTCCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770887 92 - 92844088 CCCCGAGTCTCCTTCCTCACCAGACGCTGTGAGGCCCCTGCCTGGGCTGTGGATTGGGGTTGGGG--AGGGCGGCATGGCATCCCCGGGTCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437535 92 + 96509753 CCCCGAGTCTCCTTCCTCACCAGACGCTGTGAGGCCCCTGCCTGGGCTGTGGATTGGGGTTGGGG--AGGGCGGCATGGCATCCCCGGGTCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908520 92 - 16982598 CCCCGAGTCTCCTTCCTCACCAGACGCTGTGAGGCCCCTGCCTGGGCTGTGGATTGGGGTTGGGG--AGGGCGGCATGGCATCCCCGGGTCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711793 92 - 3785965 CCCCGAGTCTCCTTCCTCACCAGACGCTGTGAGGCCCCTGCCTGGGCTGTGGATTGGGGTTGGGG--AGGGCGGCATGGCATCCCCGGGTCCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290141 92 - 90373283 CCCCGAGTCTCCTTCCTCAGCAGACGCTGTGAGGCCCCTGCCTGGGCTGTGGATTGGGGTTGGGG--AGGGCGGCATGGCATCCCCGGGTCCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104240 92 - 179258 CCCCGAGTCTCCTTCCTCACCAGACGCTGTGAGGCCCCTGTCTGGGCTGTGGATTGGGGTTGGGG--AGGGCGGCATGGCATCCCCGGGTCCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580312 92 - 5823884 CCCTGAGTCTCCTGCCTCACCAGACGCTGTGAGGCCCCTGCCTGGGCTGTGGATTGGGGTTGGGG--AGGGCGGCATGGGATCCCCGGGTCCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60114 92 + 372756 CCCCGAGTCTCCTTCCTCACTAGATGCTGTGAAGCCCCTGCCTCGGCTGTGAATTGGAGTTGGGG--AGGGTGGCATGGGAACCCCAGCTCCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296518 92 + 16356641 CCCCGAGTCTCCTTCCTCACTAGATGCTGTGAGGCCCCTGCCTGGGCTATGGATTGGAGTTGGGG--AGGGCGGCATGGGAACCCCGGGTCCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165701 92 + 1231380 CCCTGAGTCTCCTTCCTCACTAGACGCTGTGAGGCCCCTGCCTGGGCTGTGGATTGGAGTTGGGG--AGGGTGGCATGGGAACCCTGGGTCCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697775 91 + 11732439 CCCCGAGTCTCCCTCCTCACTAGACGCTGTGAGGCCCCCGCTTGGGCTGTGGATTGGAGTTGGGG--AGGGCGGCATGGGAACCCCGG-TCCCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22859155 84 + 22939663 CCCTTTGTCTCTT-------AGTGTTCTGTGGGGTCCCTGTCTGGGCCATGGCATGGGGTCCGGG--GGGTTGCCCTGGG-TCCATGGATCCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181804798 92 + 182113224 CCCTGGGTTTTCCTTATCACCTTGATGCATGAAGACCTGGCTTGCGCCATTGG--AGGGTTGGGGGAGAGGTAGCATGGGGTCTTTGAGTCCCA i mm10.chr2 C 0 I 1 s canFam3.chr24 47618855 68 + 47698779 CTGTGCATGT----------GGGGCTCCGAGGGGTTTCTGCCCAGGCTGTGGGATGGGCCGTGGG----------------TCCCCGGGCCCTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 257386 68 - 397369 TCCTGCGTCTCCGTCCTCG--GGGCTGTGTGGGGTCCCTAC----------------------AG--AGGGCAGAATGCGTGGGCCTGGCGTCG i dasNov3.JH569290 I 1293 C 0 e proCoq1.NW_012150197v1 1871756 195 - 2029793 I e micMur3.chr18 56876156 668 + 57149010 I a score=16670.000000 s hg38.chr20_KI270870v1_alt 125622 1 + 183433 T s panTro5.chr20 66451844 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126891 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515958 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038040 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770979 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437627 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908612 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711885 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290233 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104332 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580404 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60206 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296610 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165793 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697866 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56876824 1 + 57149010 T i micMur3.chr18 I 668 C 0 s otoGar3.GL873542 22859239 1 + 22939663 T i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181804891 1 + 182113224 C i mm10.chr2 I 1 C 0 s canFam3.chr24 47618923 1 + 47698779 T i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 257454 1 - 397369 T i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1871756 195 - 2029793 I a score=6252429.000000 s hg38.chr20_KI270870v1_alt 125623 331 + 183433 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCCATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCCGCCACACCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TTCTTGTTTCTCTT-CT-GTGTTGCTCCTGGGAGGGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC s panTro5.chr20 66451845 331 + 66533130 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCCATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCCGCCACACCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TTCTTGTTTCTCTT-CT-GTGTTGCTCCTGGGAGGGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62126892 331 + 62195757 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCCATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCCGCCACACCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TTCTTGTTTCTCTT-CT-GTGTTGCTCCTGGGAGGGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 515959 331 - 578057 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCCATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACATGGCCCCCGCCACACCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TTCTTGTTTCTCTT-CT-GTGTTGCTCCTGGGAGGGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038041 330 - 110113093 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCCATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGTCCCAGCGTGGCCCCCGCCACACCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TTCTTGTTTCTCTT-CT-GTGTTGCTCCCGGGAGGGGCAGGA-TCAAGGGGCAGTGGAG-----GAGGG--AC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92770980 330 - 92844088 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCTATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCTACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TCGTTGTTTCTCTT-CC-GTGTCGCTCCTGGGA-GGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437628 330 + 96509753 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCTATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCTACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TCGTTGTTTCTCTT-CC-GTGTCGCTCCTGGGA-GGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908613 330 - 16982598 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCTATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCTACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TCGTTGTTTCTCTT-CC-GTGTCGCTCCTGGGA-GGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3711886 331 - 3785965 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCTATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCTACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TCGTTGTTTCTCTT-CC-GTGTCGCTCCCGGGAGGGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290234 331 - 90373283 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCTATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCTACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TTGTTGTTTCTCTT-CC-GTGTTGCTCCTGGGAGGGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104333 331 - 179258 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCTATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCTACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TCGTTGTTTCTCTT-CC-GTGTCGCTCCCGGGAGGGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580405 331 - 5823884 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCTATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCTACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTGGGGAGAA-TTG-TCGTTGTTTCTCTT-CC-GTGTTGCTCCTGGGAGGGGCAGGATTCAAGGGGCAGTGGAG-----GAGGG--AC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60207 331 + 372756 -CTCACTGGCTGTGCATCCCTGTACTGCACTCCAGGCCCATGTGCTTCGTGAAACAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCCACCACGCCCAGGGCCAACTTGGCTAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTCCAATGTAAGTTGGGGAGAA-TTG-TTCTTGTTTCTCTT-CT-GCGTTGCTCCTGGGAGGGGCAGGATTCAGGGGGCAGTGGAG-----GAGGG--AC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296611 331 + 16356641 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCCATGTGCTTCGTGAAACAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAATGTGGCCCCCGCCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTCCAATGTAAGTTGGGGAGAA-TCG-TTCTTGTTTCTCTT-CT-GCGTCGCTCCTGGGAGGGGCAGGATTCAGGGGGCAGTGGAG-----GAGGG--AC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1165794 331 + 1231380 -CTCACTGGCTGTGCATCCCTGTACTGCACCCCAGGCCCATGTGCTTCGTGAAACAGCTCGAGGTCCCTCCATATGGGAGCTACCGGCCCAACGTGGCCCCCGCCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTCCAATGTAAGTTGGGGAGAA-TTG-TTCTTGTTTCTCGT-CT-GCGTTGCTCCTGGGAAGGGCAGGATTCAGGGGGCAGTGGAG-----GAGGG--AC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2697867 327 + 11732439 -CTCACTGGCTGTGCGTCCCTGTCCTGCACCCCAGGCCCATGTGCTTCGTGAAACAGCTCGAGGTCCCTCCGTATGGGAGCTACCGGCCCAACGTGGCCCCCACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCCAAAGCCTTCCAATGTAAGTTGGGGAGAA-CTG----TTGTTTCTCTT-CT-GTGTTGCTCCTGGGAGGGGCAGGATTCA-GGGGCAGTGGAG-----GAGGG--AC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56876825 328 + 57149010 -CTCACTGGCTCTGCTTCCCTGTCCTG-CACCCAGGCCCATGTGCTTTGTGAAGCAGCTCGAGGTCCCTCCGTACGGGAGCTACCGGCCCAGTGTGGCTCCTACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATACAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTTGGGGCAA-TTG-TTGTTGTTTCTCTCCCT-GTGTT-CTCCTGGGAGCAGCAGGACTCAGGAGCCTGTGGAG-----AAGGG---- i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1871951 330 - 2029793 -CTCATTGGCTTTGCAACCCTGTCCTGCCCCCCAGGCCCATGTGCTTCGTGAAGCAGCTCGAGGTCCCTCCGTATGGGAGCTACCGGCCCAATGTGGCTCCTACCACGCCCAGGGCCAACTTGGCCAAGGAACTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAATGTAAGTTTGGGCGAA-TCG-TTGTTGTTTCTCTTCCT-GGGTTGCTCCTGGGAGCAGCAGGCCTCAGGAGGCAGTGGGG-----AAGGG---- i proCoq1.NW_012150197v1 I 195 C 0 s otoGar3.GL873542 22859241 333 + 22939663 -CTCACTGGCTCTGCATCCCTGTCCTGCACCCCAGGCCTATGTGCTTCGTGAAGCAGCTTGAAGTCCCTCCATATGGGAGCTACCGGCCCAGTGTGGCTCCTACCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTCAGTGTAAGTTCAGGAGAATTTG-CTCTTTTTTCTTTTCCT-GTATTGCTCCTGGGAGCAGCGGGACTCAACAGACAGTGGAG-----AAAGGGC-- i otoGar3.GL873542 I 1 I 104 s mm10.chr2 181804892 319 + 182113224 -CTTACAGACTCTGCATCTCTGTCTCATACCCCAGGCCCATGTGTTTTGTGAAGCAGCTTGAGGTTCCACCTTATGGGAGCTACAGACCCAATGTGGCTCCCGCCACGCCCAGGGCCAACTTGGCCAAGGAGCTGGAGAAGTTCTCCAAAGTCACCTTTGACTACGCAAGTTTTGATGCTCAGGTTTTTGGCAAACGTATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCCAAAGCCTTCCAATGTAAGTTGGGGAGAA-TTGTTTAATGTCTCTCCT-CTCACATTGCTCCTGAGA--------------GGGACAGTGGGG-----GAGGG--AT i mm10.chr2 C 0 C 0 s canFam3.chr24 47618925 307 + 47698779 -CTCA-TGGTTCTGCACCTGTGTCCTCTACCTCAGGCCTATGTGCTTCGTGAAGCAGCTTGAGGTTCCTCCGTATGGAAGCTACCGGCCTAGTGTGGCCCCTGCCACACCCAGGGCCAACCTGGCCAAGGAGCTGGAGAAGTTCTCCAAGGTCACCTTTGACTACGCAAGTTTTGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCTAAAGCCTTTAAATGTAAGTTGGGGAGCT-TCA----------------CT---------CCTGAAAGGTATAGGGTCTGAGAGACGG-GGAG-----GAGGG--AC i canFam3.chr24 I 1 I 2 s dasNov3.JH569290 257455 336 - 397369 CGTCACGGGCTCTG--TCTCTGTCCCCGTGCCCAGGCCCATGTGCTTCGTGAAGCAGCTGGAGGCCCCTCCGTACGGGAGCTACCGGCCCAGCGCGGCCCCCGCCACCTCCAGGGCCAACCTGGCCAAGGAGCTGGAAAAGTTCTCCAAGGTCACCTTCGACTACGCGAGTTTCGATGCTCAGGTTTTTGGCAAACGCATGCTTGCCCCAAAGATTCAGACCAGCGAAACCTCACCCAAAGCCTTTAAATGTAAGTTGGGGAGAA-CCA-TTCGTCTTCCTCTTCCT-GCGTTGCTTCTGGGAGGGCCAGTATAGGAGGGGCTCTTGAGCCCCTGTGGG--GT i dasNov3.JH569290 C 0 C 0 a score=193405.000000 s hg38.chr20_KI270870v1_alt 125954 15 + 183433 CCTCTCGAGGAGCTA s panTro5.chr20 66452176 15 + 66533130 CCTCTCGAGGAGCTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127223 15 + 62195757 CCTCTCGAGGAGCTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516290 15 - 578057 CCTCTCGAGGAGCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038371 15 - 110113093 CCTCTCGAGGAGCTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771310 15 - 92844088 CGTCTCAAGGAGCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437958 15 + 96509753 CGTCTCAAGGAGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908943 15 - 16982598 CGTCTCAAGGAGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712217 15 - 3785965 CGTCTCAAGGAGCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290565 15 - 90373283 CGTCTCAAGGAGCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104664 15 - 179258 CGTCTCAAGGAGCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580736 15 - 5823884 CGTCTCGAGGAGCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60538 15 + 372756 GCTCTCAAGGAGCTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296942 15 + 16356641 CCTCTCGAGGAGCTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166125 15 + 1231380 CCTCTCGAGGAGCTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698194 14 + 11732439 -CTCTCGGGGAGCTA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56877153 15 + 57149010 CCTCTCAAGGAGCTA i micMur3.chr18 C 0 I 115 s proCoq1.NW_012150197v1 1872281 15 - 2029793 CCTCTCAAGGAGCTA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22859678 15 + 22939663 CCTCTCATGGGGCTG i otoGar3.GL873542 I 104 C 0 s mm10.chr2 181805211 14 + 182113224 -TTTCTTGGGAGCTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47619234 11 + 47698779 CCTCGCCAACA---- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 257791 14 - 397369 -CCCCAGAGGAGCTG i dasNov3.JH569290 C 0 C 0 a score=1305045.000000 s hg38.chr20_KI270870v1_alt 125969 119 + 183433 CTAGGGAGGGAAACTCTACCCTCATGGGAGGACCACGATGCAGGCTGGAGGTC-----------TCAGCTGTCCCAGTGGGCACTGTGGTGGC-TTTC-TTGGGGCCTGCATCTCACTCCTGCTGCCACCTT s panTro5.chr20 66452191 119 + 66533130 CTAGGGAGGGAAACTCTACCCTCATGGGAGGACCACGATGCAGGCTGGAGGTC-----------TCAGCTGTCCCGGTGGGCACTGTGGTGGC-TTTC-TTGGGGCCTGCATCTCACTCCTGCTGCCACCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127238 119 + 62195757 CTAGGGAGGGAAACTCTACCCTCATGGGAGGACCACGATGCAGGCTGGAGGTC-----------TCAGCTGTCCCGGTGGGCACTGTGGTGGC-TTTC-TTGGGGCCTGCATCTCACTCCTGCTGCCACCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516305 119 - 578057 CTAGGGAGGGAAACTCCACCCTCATGGGAGGACCACGATGCAGGCTGGAGGTC-----------TCAGCTGTCCCAGTGGGCACTGTGGTGGC-ATTC-TTGGGGCCTGCATCTCACTCCTGCTGCCACCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038386 118 - 110113093 CTAGGGAGGGAATCTCTGCCCTCATGGGAGGACCACGATGCAGGCTGCAGGTC-----------TTAGCTGTCCCGG-GGGCACTGTGGTGGC-TTTC-TTGGGGCCTGCATCTCACTCCTGCTGCCACCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771325 119 - 92844088 CTAGGGAGGGACTCTCTACCCTCGTGAGGGGACCACGATGCAGGCTGCAGGTC-----------TTAGCTGTCCCAGTGGGCACTGTGGTGGC-TTTC-TTGGGGCCTACATCTCACTCCTGCTGCCACCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96437973 119 + 96509753 CTAGGGAGGGACTCTCTACCCTCGTGAGGGGACCACGATGCAGGCTGCAGGTC-----------TTAGCTGTCCCAGTGGGCACTGTGGTGGC-TTTC-TTGGGGCCTACATCTCACTCCTCCTGCCACCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16908958 119 - 16982598 CTAGGGAGGGACTCTCTACCCTCGTGAGGGGACCACGATGCAGGCTGCAGGTC-----------TTAGCTGTCCCAGTGGGCACTGTGGTGAC-TTTC-TTGGGGCCTACATCTCACTCCTGCTGCCACCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712232 119 - 3785965 CTAGGGAGGGACTCTCTACCCTCGTGAGGGGACCACGATGCAGGCTGCAGGTC-----------TTAGCTGTCCCAGTGGGCACTGTGGTGGC-TTTC-TTGGGGCCTGCATCTCACTCCTGCTGCCACCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290580 119 - 90373283 CTAGGGAGGGACTCTCTACCCTCGTAAGGGGACCACGATGCAGGCTGGAGGTC-----------TTAGCTGTCCCAGTGGGCACTGTGGTGGC-TTTC-TCGGGGCCTGCATCTCACTCCTGCTGCCACCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104679 119 - 179258 CTAGGGAGGGACTCTCTACCCTCGTGAGGGGACCACGATGCAGGCTGCAGGTC-----------TTAGCTGTCCCAGTGGGCACTGTGGTGGC-TTTC-TTGGGGCCTGCATCTCACTCCTGCTGCCACCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580751 119 - 5823884 CTAGGGAGGGAATCTCCACCCTCGTGAGGGGACCATGATGCAGGCTGGAGGCC-----------TCAGCTGTCCCAGTGGGTACTGTGGCGGC-TTTC-TTGGGGCCTGCGTCTCACTCCTGCTGCCACCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60553 120 + 372756 GTAGGGAGGGAATCTCTACTCTCATGGGGGGACCACGATGCAGGCTGGAGGTG-----------TTAGCTGTCTCAGTGGGCACTGTGGTAGCTTTTT-TTGGGGCCTGCATCTCAATCATGCTGCCACCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16296957 119 + 16356641 GTCGGGAGGGAATCTCTGCTCTCATGGGGGGACCACGATGCAGGCTGGAGATC-----------TTAGCTGTCTCAGTGGGCACTGTGGTGGC-TTTC-TTGGGGCCTGCATCTCAATCATGCTGCCACCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166140 117 + 1231380 GTTGGGAGGGAATCTCTGCTGTCATGGGGGGACCACGATGCAGGCTGGAGGTC-----------TTAGCTGTCTCAGTGGGCACCGTGGTGGC-TTTC-TTGGGGCCTGCATCTCAATCATGCTGCCACC-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698208 119 + 11732439 GTGGGGAGGGAATCTCTACTCTTATGCGGGGACCACGATGCAGGCTGGAGGTC-----------TTAGCTGGCTCGGTGGGCACCGTGGTGGC-TTTC-TTGGGGCCTGCATCTCAATCACGCTGCCACCTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1872296 115 - 2029793 --GCAGGGGGAAGCTCTGCCTTCGTTGGGGGGCCAGAGTGCAGGCCTGAGGCC-----------TCAGCTGTTCC-GCGGGCACGATCACGGC-TTTC-TTGGGGCC-ACATCTTACCCGTATTGCTGCTGC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22859693 113 + 22939663 GTGCTGAGGGAATCTTTGCCCTT-----GGGTTCAGAGTGCA-GCCTGAGGCC-----------TTAGCTGTCCTGGTGGGCACTGTCATAGC-TTTCACTGGGGCC-ACATCTTACCCATGTTGCTGCCAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181805225 89 + 182113224 ----GGAGGGA----------------------CAGGATGCCAGCCTGAATCCTCTCTCTTTCTTCAGCTGCTCCAGTGGGC-TAGTTGTGGT-ATCA-TTAGGGCCTGCATCTTACC-------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47619245 96 + 47698779 GTGTGCAGGTTATCTCTCCCCT------GGGGGCA-----------------C-----------CTGGCCGTGCCAGTGTCTACTGTGGTGGC-TTTC-CCGGAGTTTGTGTCTTGCCCGTGTCACTGCCGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 257805 50 - 397369 -------GTGAGTCCCTAC------------------ATGGGGGCTGACCGTG-----------T--------CCGGTAGGCGTCGTGCTCAC-T------------------------------------- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56877168 115 + 57149010 I a score=789301.000000 s hg38.chr20_KI270870v1_alt 126088 51 + 183433 CATGTTCACCATTAACATTTATGTGTCTCCTAGTTATTTGTGAAACAAAAC s panTro5.chr20 66452310 51 + 66533130 CATGTTCACCATTAACATTTATGTGTCTCCTAGTTATTTGTGAAACAAAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127357 50 + 62195757 CATGTTC-CCATTAACATTTATGTGTCTCCTAGTTATTTGTGAAACAAAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516424 51 - 578057 CATGTTCACCATTAACATTTATGTGTCTCCTAGTTATTTGTGAAACAAAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038504 51 - 110113093 CATGTTCACCATTAACATTTATGTGTCTCCTAATTATTTGTGAAACAAAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771444 51 - 92844088 GATGTTCACCATTAACATTTATGTGTCTCCTAATTATTTGTGAAACAAAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438092 51 + 96509753 CATGTTCACCATTAACATTTATGTGTCTCCTAATTATTTGTGAAACAAAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909077 51 - 16982598 CATGTTCACCATTAACATTTATGTGTCTCCTAATTATTTGTGAAACAAAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712351 51 - 3785965 CATGTTCACCATTAACATTTATGTGTCTCCTGATTATTTGTGAAACAAAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290699 51 - 90373283 CATGTTCACCATTAACATTTATGTGTCTCCTAATTATCTGTGAAACAAAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104798 51 - 179258 CATGTTCACCATTAACATTTATGTGTCTTCTAATTATTTGTGAAACAAAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580870 51 - 5823884 CATGTTCACCATTAACATTTATGTGTCTCCTAATTATTTGTGAAACAAAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60673 51 + 372756 CATGTTCACCGTTAACATTTATGTGTCTCCTAATTATTTGTGAAACAAAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297076 51 + 16356641 CATGTTCACTGTTAACATTTATGTGTCTCCTAATTATTTGTGAAACAAAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166257 51 + 1231380 CATGTTCACCGTTAACATTTATGTGTCTCCTAATTATTTGTGAAACAAAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698327 51 + 11732439 CATGTTCACCGTTAACATTTATGTGTCTCCTAATTATTTGTGAAACGAAAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56877283 51 + 57149010 CATGTTCACCATTAACCTTTACGTGTCTCCCAATTATTTATGAAAGAAAAC i micMur3.chr18 I 115 I 248 s proCoq1.NW_012150197v1 1872411 51 - 2029793 CGTGTTCACCATTAACCGTTATGTGTCTCCTAATTATTTATGAGACAAAAC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22859806 51 + 22939663 CATGTTCACCATCAACCTTTATGTGTCTCGTAATTATTTATGAAACAAAAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181805314 39 + 182113224 CATGTTCACTTTGAGCCTTTATGTGTTTCTT------------AAGAAAAT i mm10.chr2 C 0 I 1 s canFam3.chr24 47619341 40 + 47698779 CATGCTCCCCATCAAGTCTGATGTGTCT-----------GTGAAACAAAAC i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 257855 0 - 397369 C a score=374734.000000 s hg38.chr20_KI270870v1_alt 126139 35 + 183433 CCAGATCCGTTACGGGCGTGTGTGTCCAAAGACTT s panTro5.chr20 66452361 35 + 66533130 CCAGATCCGTTACGGGCGTGTGTGTCCAAAGACTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127407 35 + 62195757 CCAGATCCGTTACGGGCGTGTGTGTCCAAAGACTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516475 35 - 578057 CCAGATCCGTTACGGGCGTGTGTGTCCAAAGACTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038555 18 - 110113093 CCAGATCCGTTATGGGCA----------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771495 35 - 92844088 CCAGATCCGTTATGAGTGTGTGTGTCCAAAGACTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438143 35 + 96509753 CCAGATCTGTTATGAGTGTGTGTGTCCAAAGACTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909128 35 - 16982598 CCAGATCCGTTATGAGTGTGTGTGTCCAAAGACTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712402 35 - 3785965 CCAGATCCGTTATGAGTGTGTGTGTCCAAAGACTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290750 35 - 90373283 CCAGATCTGTTATGAGTGTGTGTGTCCAAAGACTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104849 35 - 179258 CCAGATCCGTTATGAGTGTGTGTGTCCAAAGACTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580921 35 - 5823884 CCAGATCTGTTACGAGTGTGTGTCTCCGAAGACTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60724 33 + 372756 CCAGATCTGTTATGGGCCTGTATGTCCAAAGAC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297127 33 + 16356641 CCAGATCTGTTATGGGCCTGTATGTCCAAAGAC-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166308 33 + 1231380 CCTGATCTGTTATGGGCCTGTATGTCCAAAGAT-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698378 33 + 11732439 CCAGATCTGTTATGGGCCTGTATGTCCAAAGAC-- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1872462 35 - 2029793 CCGGATCCTTTATGGGCATATATGTCCAAAGACTT i proCoq1.NW_012150197v1 C 0 I 128 s otoGar3.GL873542 22859857 26 + 22939663 CTGGATC---------TGTGTATTTCCAGAGACAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181805354 35 + 182113224 ATGGGTCTGTTATGGGTGTGTATGTCCAGAGGCTT i mm10.chr2 I 1 C 0 s canFam3.chr24 47619381 34 + 47698779 CTAAGTCCTTTACG-GTGTGCATGTCCAAAGGCTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 257855 20 - 397369 ---------------GCGTGGAAGCCCAGAGGCTC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56877334 248 + 57149010 I a score=1104984.000000 s hg38.chr20_KI270870v1_alt 126174 130 + 183433 --CAGAGCAACCCCACCAGCATGGTTCACACTG-GGAGACGCCACTCTCCCCACTGTCCTCCTGCTACCT--GTTTAATCCCAGTGCAGCCGGCTGTCCATTTCCCAGCCCTGCCTCTGGGGAGGGTC--------------------AGACTGT s panTro5.chr20 66452396 130 + 66533130 --CAGAGCAACCCCACCAGCATGGTTCACACTG-GGAGACGCCACTCTCCCCACTGTCCTCCTGCTACCT--GTTTAATCCCAGTGCAGCCGGCTGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGACTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127442 130 + 62195757 --CAGAGCAACCCCACCAGCATGGTTCACACTG-GGAGACGCCACTCTCCCCACTGTCCTCCTGCTACCT--GTTTAATCCCAGTGCAGCCGGCTGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGACTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516510 130 - 578057 --CAGAGAAACCCCACCAGCATGGTTCACACTG-GGAGACGCCACTCTCCCCACTGTCCTCGTGCTACCT--GTTTAATCCCAGTGCAGCCGGCTGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGACTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038573 103 - 110113093 ----------------CACCACGGCTCACCCTG-GGAGACGCCACTGT-CCCACTGTCCTCGTGCTACCT--GTTTAATCCCAGTG------------CATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------GGACTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771530 130 - 92844088 --CAGAGCAACTCCACTAACGTGGTTCACCCTG-GGAGACCCCACTCTCCCCACTGTCCTCGTGCTACCT--GTTTAATCCCAATGCAGCCGGGCGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGGCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438178 130 + 96509753 --CAGAGCAACTCCACTAACGTGGTTCACCCTG-GGAGACCCCACTCTCCCCACTGTCCTCGTGCTACCT--GTTTAATCCCAATGCAGCCGGGCGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGGCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909163 130 - 16982598 --CAGAGCAACTCCACTAACGTGGTTCACCCTG-GGAGACCCCACTCTCCCCACTGTCCTCGTGCTACCT--GTTTAATCCCAATGCAGCCGGGCGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGGCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712437 130 - 3785965 --CAGAGCAACTCCACTAACATGGTTCACCCTG-GGAGACCCCACTCTCCCCACTGTCCTCGTGCTACCT--GTTTAATCCCAATGCAGCCGGGCGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGGCTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290785 130 - 90373283 --CAGAGCAACTCCACTAACATGGTTCACGCTG-GGAGACCCCACTCTCCCCACTGTCCTCGTGCTACCT--GTTTAATCCCAATGCAGCCGGGCGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGGCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 104884 130 - 179258 --CAGAGCAACTCCACTAACATGGTTCACCCTG-GGAGACCCCACTCTCCCCACTGTCCTCGTGCTACCT--GTTTAATCCCAATGCAGCCGGGCGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGGCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5580956 130 - 5823884 --CAGAGCAACTCCACTAACATGGTTCACCCTG-GGAGACCCCACTCTCCGCACTGTCCTCATGCTACCT--GTTTAATCCCAATGCAGCCGGGCGTCCATTTCCCAGCACTGCCTCTGGGGAGGGTC--------------------AGACTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60757 121 + 372756 --CAGAGCAACTTCACCAACATGGTTCACCCTG-GGAGATCCCCCTCTCCCCACTGTCCTCATGCAACCT--GTTTAATCCCAATGCAGCTGGT-GTCCATTTCCCA-CACTGCCTCTGGGCGGGGCC--------------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297160 121 + 16356641 --CAGAGCAAGTTCACCAACATGGTTCACCCTG-GGAGATCCCCCTCTCCCCACTGTCCTCATGCAACCT--GTTTAACCCCAATGCAGCTGGG-GTCCATTTCCCA-CACTGCCTCTGGGCAGGGCC--------------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166341 121 + 1231380 --CAGAGCAAGTTCACCAACATGGCTAACCCTG-GGAGATCCCCCTCTCCCCACTGACCTCATGTAACCT--GCTTAACCCCAATGCAGCTGGG-GTCCATTTCTCA-CACTGCCTCTGGGTGGGGCC--------------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698411 148 + 11732439 --CAGAGCAACTTCACCAACGTGGCTCACCCTG-GGAGATCCCTCTGCCCCCACTGTCCTCACGCAACCT--GTTTAATCCCAGTGCAGCTGGT-GTCCATTTCCCA-CGCTGCCTCTgggcggggccgggtgactgctgggcggggccgggtga i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22859883 129 + 22939663 --AAGAATAACCTCACTGTTATGGTTCCCCCTG-GGAGAACCC-CTCTCCTGACTATCCTCATGCAACCT--GTTTAATTCCAACACAGTGGGGTGTCCACTTTCCAGCACTGCCTCTGGGAGGGTTT--------------------GGGCTAT i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181805389 72 + 182113224 --AAGAATCGCTTCACTGATGTGGTCTGCCC----------------------------------------------------------CAGGGTGTCCACTT-CCAGCATCACCTTTAAGGAGAGTC--------------------CAACA-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47619415 46 + 47698779 --AGGAATACCTCCCTCGATGTGGTCTGCCCTGCGGAGGC----------------------------------------------------------------------------TTGGGCAG------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 257875 116 - 397369 AGGAGCACAAGCTTGCCGGCC---CCCACCCTG-CCGGACGTCCTCTTTCCTGCTGTCCTCACCTCGTGTTGGTTTAATC---------------AGCTTCTCTCTAAAGGGAGCCCTTGCTTGAGAC--------------------GGGCTGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1872497 128 - 2029793 I e micMur3.chr18 56877334 248 + 57149010 I a score=180164.000000 s hg38.chr20_KI270870v1_alt 126304 39 + 183433 GGG---------CTGGGTG-----GGGCCAGATGACTGCGGGGCTGGGCCCAG s panTro5.chr20 66452526 39 + 66533130 GGG---------CTGGGTG-----GGGCCAGATGACTGCGGGGCTGGGCCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127572 39 + 62195757 GGG---------CTGGGTG-----GGGCCAGATGACTGCGGGGCTGGGCCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516640 39 - 578057 GGG---------CTGGGTG-----GGGCCAGACGACTGCGGGGCTGGGCCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038676 39 - 110113093 GGG---------CTGGGTG-----GGGCCAGACGACTGTGGGGCTGGGCCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771660 39 - 92844088 GGG---------CTGGGTG-----GGGACAGATGACTGCGGGGCTGGGCCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438308 39 + 96509753 GGG---------CTGGGTG-----GGGACAGATGACTGCGGGGCTGGGCCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909293 39 - 16982598 GGG---------CTGGGTG-----GGGCCAGATGACTGCGGGGCTGGGCCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712567 39 - 3785965 GGG---------CTGGGTG-----GGGCCAGATGACTGCGGGGCTGGGCCCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290915 39 - 90373283 GGG---------CTGGGTG-----GGGCCAGATGACTGCGGGGCTGCGCCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105014 39 - 179258 GGG---------CTGGGTG-----GGGCCAGATGACTGCGGGGCTGGGCCCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581086 39 - 5823884 GGG---------CTGGGTG-----GGGCCAGATGACTACGGGGCTGGGCCCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60878 2 + 372756 ---------------------------------------------------AG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297281 1 + 16356641 ----------------------------------------------------T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166462 2 + 1231380 ---------------------------------------------------CG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698559 38 + 11732439 ctg---------ctgggcg-----gggccgggtgactgctgggcgggg-cCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1872625 39 - 2029793 GGG---------CTGGGTG-----GGGCCAGAAAACTGCCGGGCTGGGCCCAG i proCoq1.NW_012150197v1 I 128 I 48 s otoGar3.GL873542 22860013 39 + 22939663 GGA---------TTGGGTG-----GGTCTGGACAACTACTGACCTGGGCCCCA i otoGar3.GL873542 I 1 I 1 s mm10.chr2 181805461 11 + 182113224 AGA---------TAGGGTG-----G---------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47619461 18 + 47698779 -----------------------------------CCACGATGCTCAGCCTGG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 257991 49 - 397369 GGGCTCCCCACCCTGAGTACCGGCAGGCCAGGCAA--GCTGCACCACGTCC-- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56877334 248 + 57149010 I a score=733403.000000 s hg38.chr20_KI270870v1_alt 126343 70 + 183433 TGCCCTGGC----AGGA-AGC-CAT-TGCTCTCCTG-GTGGGGACCATCTTACTGGATACAATGTGTTATCTGTGACA s panTro5.chr20 66452565 55 + 66533130 TGCCCTGGC----AGGA-AGC-CAT-TGCTCTCCTG-GTGG---------------ATACAATGTGTTATCTGTGACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127611 55 + 62195757 TGCCCTGGC----AGGA-AGC-CAT-TGCTCTCCTG-GTGG---------------ATACAATGTGTTATCTGTGACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516679 70 - 578057 TGCCCTGGC----GGGA-AGC-CAT-TGCTCTCCTG-GTGGGGACCATCTTACTGGATACAATGTGTTATCTGTGACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038715 70 - 110113093 TGCCCTGGC----AGGA-AGC-CAT-TGCTCTCCTG-GTGGGGACCATCTTACTGGATACAATGTGTTATCTGTGACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771699 70 - 92844088 TGCCCTGGC----GGGA-AGC-CAT-TGGTCTCCTG-GTGGGGACCGTCTTACTGGATACAATGTGTTATTTGTGACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438347 70 + 96509753 TGCCCTGGC----GGGA-AGC-CAT-TGGTCTCCTG-GTGGGGACCGTCTTACTGGATACAATGTGTTATTTGTGACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909332 70 - 16982598 TGCCCTGGC----GGGA-AGC-CAT-TGGTCTCCTG-GTGGGGACCGTCTTACTGGATACAATGTGTTATTTGTGACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712606 70 - 3785965 TGCCCTGGC----GGGA-AGC-CAT-TGGTCTCCTG-GTGGGGACCGTCTTACTGGATACAATGTGTTATTTGTGACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90290954 70 - 90373283 TGCCCTGGC----GGGA-AGC-CAC-TGGTCTCCTG-GTGGGGACCGTCTTACTGGATACAATGTGTTATTTGTGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105053 70 - 179258 TGCCCTGGC----GGGA-AGC-CAT-TGGTCTCCTG-GTGGGGACCGTCTTACTGGATACAATGTGTTATTTGTGACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581125 70 - 5823884 TGCCCTGGC----GCGA-AGC-CAT-TGGTCTCCTG-GTGGGGACCGTCTTACCGGATACAATGTGTTATTTGTGACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60880 68 + 372756 TATCCTGGC----AGGA-AGC-CAT-TGCTTTCCTG-GTGGGG--CAACTTACTGGATACAATGTGTTGTTTGTGACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297282 69 + 16356641 TATCCTGGC----AGGA-AGC-CAT-TGCTTTCCTG-GGGGGGA-CAACTTACTGGATACGATGTGTTGCTTGTGAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166464 69 + 1231380 TATCCTGGC----AGGA-AGC-CAT-TGCTTTCCTG-AGGGGGA-CAACTTACTGGATACAACGTGTTGCTTGTGACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698597 73 + 11732439 TATCCTGGCCGGAAGGA-AGC-CCT-TGCTTTCCTG-GTGGGGA-CAACTTACTGGATACAATGTGTTGTTAGTGACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22860053 61 + 22939663 AACCCTAGT----GGGA-AGC-CAT-T-TTCTCTGC-ATGGGGACC-----ACTGGATACAGTGTCTT---TGTGACA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181805472 66 + 182113224 TACCATGGC----AGGA-AGCTTCT-TGGTTTCCT----GGGGACCATCTTACTGGAAATG--GTATTTTCTGTGACA i mm10.chr2 C 0 C 0 s canFam3.chr24 47619480 67 + 47698779 TGCCCCGAC----AGGA-GCT-ATT-TGCCCTCCGGCAAGGGGACCGCATTGCTGGCTACAGAGTGTT----GCGATA i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 258040 72 - 397369 TCCCCTGGC----CACACAGC-CCTCTGCTGTCCTG-CCTGGGACCATCTTGCTGGATGCAATGTGTTGTCTGTGATG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1872664 48 - 2029793 I e micMur3.chr18 56877334 248 + 57149010 I a score=145307.000000 s hg38.chr20_KI270870v1_alt 126413 10 + 183433 TTAGTAACAA s panTro5.chr20 66452620 10 + 66533130 TTAGTAACAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127666 10 + 62195757 TTAGTAACAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516749 10 - 578057 TTAGTAACAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038785 10 - 110113093 TTAGTAACAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771769 10 - 92844088 TTAGTGACAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438417 10 + 96509753 TTAGTGACAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909402 10 - 16982598 TTAGTGACAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712676 10 - 3785965 TTAGTGACAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291024 10 - 90373283 TTAGTGACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105123 10 - 179258 TTAGTGACAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581195 10 - 5823884 TTAGTGACAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60948 10 + 372756 TTAGTAACAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297351 10 + 16356641 TTAGTAACAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166533 10 + 1231380 TTAGTAACAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698670 10 + 11732439 TTAGTAACAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1872712 10 - 2029793 TTAGTAACGG i proCoq1.NW_012150197v1 I 48 C 0 s otoGar3.GL873542 22860114 10 + 22939663 TTAGTAACAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181805538 10 + 182113224 TTACCAGCAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47619547 10 + 47698779 GTAACCACAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258112 10 - 397369 TTAGCAACAA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56877334 248 + 57149010 I a score=891654.000000 s hg38.chr20_KI270870v1_alt 126423 54 + 183433 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTAAGA-----ACAA s panTro5.chr20 66452630 54 + 66533130 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTAAGA-----ACAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127676 54 + 62195757 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTAAGA-----ACAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516759 54 - 578057 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTAAGA-----ACAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038795 54 - 110113093 ATTTTCTGGGTAATTGTACTG-ACGAAAATCATTCCTACAAATCTTTAAGA-----ACAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771779 54 - 92844088 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTCAGA-----ACAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438427 54 + 96509753 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTCAGA-----ATAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909412 54 - 16982598 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTCAGA-----ACAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712686 54 - 3785965 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTCAGA-----ACAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291034 54 - 90373283 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTCAGA-----ACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105133 54 - 179258 ATTTTCTGGGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTCAGA-----ACAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581205 54 - 5823884 ATTTTCTGAGTAATTGTACTG-ACAAAAATCATTCCTACAAATCTTTAAGA-----ACAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 60958 54 + 372756 ATTTTCTGGGTAATTGTACTGAAC-AGAATCATTTCTACAAATCGTTGAGA-----ACAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297361 51 + 16356641 ATTTTCTGGGTAATTGTACTG-AC-AGAATCATTCCTACAAATC--TGAGA-----ACAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166543 53 + 1231380 ATTTTCTGGGTAATTGTACTG-AC-AGAATCATTCCTACAAATCTTTGAGA-----ACAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698680 53 + 11732439 ATTTTCTGGGTAATTGTACTG-AC-AGAATCATTCCTACAAATCTCTGAGA-----ACAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56877582 54 + 57149010 ATTTTCTAGATAGTTGTACTG-ACAAAAATCATTCCTACAAATCTTCAAGA-----ACAA i micMur3.chr18 I 248 I 650 s proCoq1.NW_012150197v1 1872722 54 - 2029793 ATTTTCTAGATAGTTGTACTG-ACAAAAATCATTCCTACAAATCTTCGAGA-----ACAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22860124 59 + 22939663 ATTTTCAAAGTAGTTGCATTG-ACAAAAGTAATTTCTACAAATCTTTGAGATTTCTGCAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181805548 54 + 182113224 ATTTTAAGGGCAATTATACTG-ACAAAAATAACTCCTGGAAATGTTCTAGA-----ATAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47619557 53 + 47698779 GTTTTCTGGGTGCTTGTACTA-ACAAAATGCATTCCTACAAAT-TTTGAGA-----ATAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258122 54 - 397369 GTTTTCTGGGTAATTGTACTG-GCAAAAATCGTTCCTACAAAATTTCACGG-----ACAA i dasNov3.JH569290 C 0 C 0 a score=755261.000000 s hg38.chr20_KI270870v1_alt 126477 63 + 183433 TCCTTTCTGTCTTGTCTTGTCACTTACTGCCCTAATTTGTGGAAT--AAGCCCATTAGCCCTGGA s panTro5.chr20 66452684 63 + 66533130 TCCTTTCTGTCTTGTCTTGTCACTTACTGCCCTAATTTGTGGAAT--AAGCCCATTAGCCCTGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127730 63 + 62195757 TCCTTTCTGTCTTGTCTTGTCACTTACTGCCCTAATTTGTGGAAT--AAGCCCATTAGCCCTGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516813 63 - 578057 TCCTTTCTGTCTTGTCTTGTCACTTACCGCCCTAATTTGTGGAAT--AAGCCCATTAGCCCTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038849 63 - 110113093 TCCTTTCTGTCTTGTCTTGTCACTTACTGCCCTAATTTGTGGAAT--AAGCCCATTAGCCCTGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771833 61 - 92844088 TCCTTTCTGTCTTGTCTTGTCACTTAC-GTCCTAGTTTGTGGAAT--AAGCTCATTAGCCCC-GA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438481 61 + 96509753 TCCTTTCTGTCTTGTCTTGTCACTTAC-GTCCTAGTTTGTGGAAT--AAGCTCATTAGCCCC-GA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909466 61 - 16982598 TCCTTTCTGTCTTGTCTTGTCACTTAC-GTCCTAGTTTGTGGAAT--AAGCTCATTAGCCCC-GA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712740 61 - 3785965 TCCTTTCTGTCTTGTCTTGTCACTTAC-GTCCTAGTTTGTGGAAT--AAGCTCATTAGCCCC-GA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291088 61 - 90373283 TCCTTTCTGTCTTGTCATGTCACTTAC-GTCCTAGTTTGTGGAAT--AAGCTCATTAGCCCT-GA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105187 61 - 179258 TCCTTTCTGTCTTGTCTTGTCACTTAC-GTCCTAGTTTGTGGAAT--AAGCTCATTAGCCCC-GA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581259 59 - 5823884 TCCTTTCTGTCTTGTCTTGTCACTTAC-GTCCTAGTT--TGAAAT--AAGCTCATTAGCCCT-GA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61012 63 + 372756 TCCTTTCAGTCTTTTCTTGTCACTTACGGCCCTAATTTGTGGAAT--AAGCCCATTAGCCCTAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297412 63 + 16356641 TCCTTTCAGTCTTTTCTTGTCACTCACCACTCTAATTTGTGGAAT--AAGCCCATTAGCCCTGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166596 60 + 1231380 ---TTTCAGTCTTTTCTTGTCACTTACCACCCTAATTTGTGGAAT--AAGCCCATTAGCCCTGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698733 63 + 11732439 TCCTTTCAGTCTTATCTTGTCACTTACCGCCCTAATTTGTGGAAT--AAGCCCATTAGCCCTGGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1872776 63 - 2029793 CCCTTCTTGTCTTTTCTTGTCACTTGACGCACTAATTTGTGCAGT--AAGCCTCCTAGCCCTGGA i proCoq1.NW_012150197v1 C 0 I 268 s otoGar3.GL873542 22860183 60 + 22939663 ---ATCTTGTCTTTTCTTGTCACTTGTGACATTAATTTATGCAAT--AAGTCTGTTAGCTCTGGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181805602 53 + 182113224 TCATCCATGCCTTTTCTTGTCATTCACTGCACTTCTTTGTGG------------TTAGCCTTGGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47619610 63 + 47698779 CCCTTCCTGTCTTTTTTGGTCACTAAT-GTACCCATCTGTGGGTTGCAAGCCCGTTAGCCTGGG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258176 64 - 397369 TCCTTTCTG-CTTTCCTTGTCACTTATTTCACTAATTCGTGGACTGCAAGTCCATTAGCCTCAGA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56877636 650 + 57149010 I a score=69687.000000 s hg38.chr20_KI270870v1_alt 126540 7 + 183433 AGTGCAT s panTro5.chr20 66452747 7 + 66533130 AGTGCAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127793 7 + 62195757 AGTGCAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516876 7 - 578057 AGTGCAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038912 7 - 110113093 AATGCAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771894 7 - 92844088 AATGCAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438542 7 + 96509753 AATGCAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909527 7 - 16982598 AATGCAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712801 7 - 3785965 AATGCAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291149 7 - 90373283 AATGCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105248 7 - 179258 AATGCAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581318 7 - 5823884 AATGCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61075 7 + 372756 AATGCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297475 7 + 16356641 AATGCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166656 7 + 1231380 AACACTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698796 7 + 11732439 AATGCAT i aotNan1.NW_018500483v1 C 0 I 4 s otoGar3.GL873542 22860243 7 + 22939663 GAGGCAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181805655 7 + 182113224 AATGAAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47619673 7 + 47698779 AACACAT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258240 7 - 397369 AGTGCAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1872839 268 - 2029793 I e micMur3.chr18 56877636 650 + 57149010 I a score=207030.000000 s hg38.chr20_KI270870v1_alt 126547 21 + 183433 GCGAAATGGAAAAGCATTCAG--- s panTro5.chr20 66452754 21 + 66533130 GCGAAATGGAAAAGCATTCAG--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127800 21 + 62195757 GCGAAATGGAAAAGCATTCAG--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516883 21 - 578057 GCGAAATGGAAAAGCATTCAG--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038919 21 - 110113093 GCGAAATGGAAAAGCATTCAG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771901 21 - 92844088 GTGGAATGGAAAAGCATTCGG--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438549 21 + 96509753 GTGGAATGGAAAAGCATTCGG--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909534 21 - 16982598 GTGGAATGGAAAAGCATTCGG--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712808 21 - 3785965 GTGGAATGGAAAAGCATTCGG--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291156 21 - 90373283 GCGGAATGGAAAAGCATTCGG--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105255 21 - 179258 GTGGAATGGAAAAGCATTCGG--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581325 21 - 5823884 GTGGAATGGAAAAGCATTTGG--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61082 21 + 372756 GTGAAATGGAAAAGCGTGGCC--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297482 21 + 16356641 GTGAAATGGAAAAGCACTGCA--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166663 21 + 1231380 GCGAAATGGAAAAGCGCTGCA--- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22860250 21 + 22939663 ATGAGATGGAAAAGTGCCCAA--- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181805662 21 + 182113224 GCAAGATGGAAATGTACCCAG--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47619680 21 + 47698779 ATGAAATGGAAAAGCACCCCA--- i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 258247 23 - 397369 ATGAAATGGAAA-GCATCCCTGAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1872839 268 - 2029793 I e micMur3.chr18 56877636 650 + 57149010 I e aotNan1.NW_018500483v1 2698803 4 + 11732439 I a score=840341.000000 s hg38.chr20_KI270870v1_alt 126568 100 + 183433 TGTACAC-ATGAGATTGGGAGTGGCA---TCGCGGGGCAGATGTTGTCAGCCCCAAACA--------TGAC-GTGACGAGTTTCCTACATGAGAA-TAATAAAAGTA-CTGATTG s panTro5.chr20 66452775 100 + 66533130 TGTACAC-ATGAGATTGGGAGTGGCG---TCGCGGGGCAGATGTTGTCAGCCCCAAACA--------TGAC-GTGACGAGTTTCCTACATGAGAA-TAATAAAAGTA-CTGATTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127821 100 + 62195757 TGTACAC-ATGAGATTGGGAGTGGCG---TCGCGGGGCAGATGTTGTCAGCCCCAAACA--------TGAC-GTGACGAGTTTCCTACATGAGAA-TAATAAAAGTA-CTGATTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 516904 100 - 578057 TGTACAC-ATGAGATTAGGAGTGGCG---TCGCGTGGCAGATGTTGTCAGCCCCAAACA--------TGAC-GTGACGAGTTTCCTACATGAGAA-TAATAAAAGTA-CTGATTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110038940 100 - 110113093 TGTACAC-ATGAGATTGGGAGTGGCG---TCTCGTGGCAGATGTTGTCAGCCCCAAACA--------TGAC-GTGACGAGTTTCCTACATGAGAA-TAATAAAAGTA-CTGATTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92771922 99 - 92844088 TG--CAC-ACGAGACTGGGAGGGGCG---TTTTGTGGCAGATGCTGTCAGCCCGAAACG--------TGACAGTGACGGGTTTCCTACATGAGAA-TAATATAAGCA-CTGATTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438570 99 + 96509753 TG--CAC-ACGAGACTGGGAGGGGCG---TTTTGTGGCAGATGCTGTCAGCCCGAAACG--------TGACAGTGACGGGTTTCCTACATGAGAA-TAATATAAGCA-CTGATTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909555 99 - 16982598 TG--CAC-ACGAGACTGGGAGGGGCG---TTTTGTGGCAGATGCTGTCAGCCCGAAACG--------TGACAGTGACGGGTTTCCTACATGAGAA-TAATATAAGCA-CTGATTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712829 99 - 3785965 TG--CAC-ACGAGACTGGGAGGGGCG---TTTTGTGGCAGATGCTGTCAGCCCGAAACG--------TGACAGTGACGGGTTTCCTACATGAGAA-TAATATAAGTA-CTGATTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291177 99 - 90373283 TG--CAC-ACGAGACTGGGAGGGGCG---TTTTGTGGCAGATGCTGTCAGCCCGAAACA--------TGACAGTGACGAGTTTCCTACATGAGAA-TAATATAAGTA-CTGATTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105276 99 - 179258 TG--CAC-ACGAGACTGGGAGGGGCG---TTTTGTGGCAGATGCTGTCAGCCCGAAACG--------TGACAGTGACGGGTTTCCTACATGAGAA-TAATATACGTA-CTGATTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581346 76 - 5823884 TGCACAC-ACGAGATTGGGAGGGGCG---TTTTGTTTCAGATGTTGTCAGCCCGAAACA--------TGACAGTAATGAGT---------------------------CTGATTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61103 99 + 372756 TGTACAC-ATGAGATTGGGAGTGGCA---TCTTGTGGCAGATG--GTCAGCCCCAAACC--------TGACAGTGACGAGTTTCCTACATGAGAA-TAATAAAAGTA-CTGATTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297503 89 + 16356641 TGTACAC-GTGAGATTGGGAATGGCA---TCTC------------GTCAGCCCCAAACC--------CGACAGTGACGAGTTTCCTATATGACAA-TAATAAAAGTA-CTGATTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166684 90 + 1231380 TGTACAC-ATGAGATTGGGAGCGGCA---TCTC------------GTCAGCCCCAAACC--------CGACAGTGACGAGCTTCCTGCATTAGAATTAATAAAAGCA-CTGACGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698807 101 + 11732439 TGTCCAC-ATGAGATTGGGAGTGGCA---TCTCGTGGCAGATGGTGTCAGCCCCAAACC--------CGACAGTGACGAGTTTCCTACATGAGAA-TAATAAAAGTA-CTGATCG i aotNan1.NW_018500483v1 I 4 C 0 s otoGar3.GL873542 22860272 93 + 22939663 ------C-GTAAACATGGGATTGGCA---TCTCTGGGTGTGTGTGGTCAGCCTG--CTA--------TGACAGGGATGAATTTCCCACACGTTAA-TAATGAAAATA-CTGATTG i otoGar3.GL873542 I 1 I 276 s mm10.chr2 181805683 95 + 182113224 --TGCACTGGGAGACCCAGAG----A---TCTCCCAGCTGATCTTGTCTGCTCCACAGA--------TAGCAAAGACAAGTTTCTAACTTGTTAG--GATTACAGTT-CTTAGGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47619702 97 + 47698779 TGTGCAC-ATGAGGTTGGAACGGGCA---TCTCCCAGTGGGTGT--TTGGCCCTGAA-A--------CGGCAGTGGGGAGT-TCCTGTCTGTTAA-TAATAGGAACG-CCGGGTG i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 258270 111 - 397369 --CTTAC-ACAAGCTCAAACTCGGCAAGCCCGCCCTGCGGGTATCGGCTGCCAAATGCAGCTCTTACTGAGCAGGATGAATGTCCTACGCGTTGA-CAATAAACATACCCGACCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1872839 268 - 2029793 I e micMur3.chr18 56877636 650 + 57149010 I a score=24741.000000 s hg38.chr20_KI270870v1_alt 126668 5 + 183433 ATGCG s panTro5.chr20 66452875 5 + 66533130 ATGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127921 5 + 62195757 ATGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517004 5 - 578057 GTGCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039040 5 - 110113093 ATGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92772021 5 - 92844088 CTGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96438669 5 + 96509753 CTGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909654 5 - 16982598 CTGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3712928 5 - 3785965 CTGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291276 5 - 90373283 CTGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105375 5 - 179258 CTGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581422 5 - 5823884 CGGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61202 5 + 372756 ATGCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297592 5 + 16356641 ATGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166774 5 + 1231380 ATGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698908 5 + 11732439 ATGCA i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181805778 3 + 182113224 TTA-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47619799 5 + 47698779 ATGCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258381 4 - 397369 ATGC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1872839 268 - 2029793 I e micMur3.chr18 56877636 650 + 57149010 I e otoGar3.GL873542 22860365 276 + 22939663 I a score=32851.000000 s hg38.chr20_KI270870v1_alt 126673 3 + 183433 GCT s panTro5.chr20 66452880 3 + 66533130 GCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127926 3 + 62195757 GCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517009 3 - 578057 GCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039045 3 - 110113093 GCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92772026 3 - 92844088 GCC i rheMac8.chr10 C 0 I 624 s macFas5.chr10 96438674 3 + 96509753 GCC i macFas5.chr10 C 0 I 234 s macNem1.NW_012014244v1 16909659 3 - 16982598 GCC i macNem1.NW_012014244v1 C 0 I 156 s cerAty1.NW_012001373v1 3712933 3 - 3785965 GCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291281 3 - 90373283 GCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105380 3 - 179258 GCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581427 3 - 5823884 GCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61207 3 + 372756 GCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297597 3 + 16356641 GCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166779 3 + 1231380 GCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698913 3 + 11732439 GCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22860641 3 + 22939663 gTT i otoGar3.GL873542 I 276 I 1 s mm10.chr2 181805781 3 + 182113224 GTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47619804 3 + 47698779 GCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1872839 268 - 2029793 I e micMur3.chr18 56877636 650 + 57149010 I e dasNov3.JH569290 258385 0 - 397369 C a score=4190.000000 s hg38.chr20_KI270870v1_alt 126676 1 + 183433 G s panTro5.chr20 66452883 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127929 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517012 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039048 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 61210 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297600 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166782 1 + 1231380 G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698916 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181805784 1 + 182113224 A i mm10.chr2 C 0 C 0 s canFam3.chr24 47619807 1 + 47698779 G i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1872839 268 - 2029793 I e cerAty1.NW_012001373v1 3712936 0 - 3785965 C e colAng1.NW_012114444v1 5581430 0 - 5823884 C e chlSab2.chr2 90291284 0 - 90373283 C e micMur3.chr18 56877636 650 + 57149010 I e dasNov3.JH569290 258385 0 - 397369 C e manLeu1.NW_012101652v1 105383 0 - 179258 C e macNem1.NW_012014244v1 16909662 156 - 16982598 I e rheMac8.chr10 92772029 624 - 92844088 I e otoGar3.GL873542 22860644 1 + 22939663 I e macFas5.chr10 96438677 234 + 96509753 I a score=1562077.000000 s hg38.chr20_KI270870v1_alt 126677 166 + 183433 CCAG-TGGGGTGTGAGCCTCTCTTCCTAACTTTGACAGAAC---CTGCTCTTTAGGATGGAGGACTTCCTGCCTCCAGGCACA--CATGCCTACTTGGATGAGGGAA-TGCAATGGTGCCAGTGGAGAGGGGGACCTCACGATAAGC-TTTCCAAT----ATATCTAGACCTTTCTGG s panTro5.chr20 66452884 166 + 66533130 CCAG-TGGGGTGTGAGCCTCTCTTCCTAACTTTGACAGAAC---CTGCTCTTTAGGATGGAGGACTTCCTGCCTCCAGGCACA--CATGCCTACTTGGATGAGGGAA-TGCAATGGTGCCAGTGGAGAGGGGGACCGCACGATAAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62127930 166 + 62195757 CCAG-TGGGGTGTGAGCCTCTCTTCCTAACTTTGACAGAAC---CTGCTCTTTAGGATGGAGGACTTCCTGCCTCCAGGCACA--CATGCCTACTTGGATGAGGGAA-TGCAATGGCGCCAGTGGAGAGGGGGACCGCACGATAAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517013 166 - 578057 CCAG-TGGGGTGTGAGCCTCTCTTCCTAACTTTGACAGAAC---CTGCTCTTTAGGATGGAGGACTTCCTGCCTCCAGGCACA--CATGCCTACGTGGATGAGGGAA-TGCAATGGTGCCAGTGGAGAGGGGGACCGCACGATAAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039049 166 - 110113093 CCAG-TGGGGCGTGAGCCTCTCTTCCTAACTTTGACAGAAC---CTGCTCATTAGGGTGGAGGACTTCCTGCCTCCAGGCACA--CATGCCTACTTGGATGAGGGAA-TGCAATGGTGCCCGTGGAGAGGGGGACCGCACGATAAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92772653 165 - 92844088 CCAG-TGGGGTGTGAGCCTCTCCTCCTAACTTTGGCAGAGC---CTGCTCGTTAGGGTGGAGGACTTCCTGCCTCCGGGCACA--CACGCCTGCTTGGATGAGGGAA-GGCAACGGTACCAGTGGAGA-GGGGACCACACGATCAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i rheMac8.chr10 I 624 C 0 s macFas5.chr10 96438911 165 + 96509753 CCAG-TGGGGTGTGAGCCTCTCCTCCTAACTTTGGCAGAGC---CTGCTCGTTAGGGTGGAGGACTTCCTGCCTCCGGGCACA--CACGCCTGCTTGGATGAGGGAA-GGCAACAGTACCAGTGGAGA-GGGGACCACACGATCAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i macFas5.chr10 I 234 C 0 s macNem1.NW_012014244v1 16909818 165 - 16982598 CCAG-TGGGGTGTGAGCCTCTCCTCCTAACTTTGGCAGAGC---CTGCTCGTTAGGGTGGAGGACTTCCTGCCTCCGGGCACA--CACGCCTGCTTGGATGAGGGAA-GGCAACGGTACCAGTGGAGA-GGGGACCACACGATCAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i macNem1.NW_012014244v1 I 156 C 0 s cerAty1.NW_012001373v1 3712936 165 - 3785965 CCAG-TGGGGTATGAGCCTCTCCTCCTAACTTCGACAGAGC---CTGCTCGTTAGGGTGGAGGACTTCCTGCCTCCGGGCACA--CACGCCTGCTTGGATGAGGGAA-TGCAACGGTACCAGTGGAGA-GGGGACCACACGATCAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291284 165 - 90373283 CCAG-TGGGGTGTGAGCCTCTCCTCCTAACTTTGGCAGAGC---CTGCTCGTTAGGGTGGAGGACTTCCTGCCTCCGGGCACA--CACGCCTGCTTGGATGAGGGAA-TGCAACGGTACCAGTGGAGA-GGGGACCACACGATCAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105383 165 - 179258 CCAG-TGGGGTATGAGCCTCTCCTCCTAACCTCGGCAGAGC---CTGCTCGTTAGGGTGGAGGACTTCCTGCCTCCGGGCACA--CACGCCTGCTTGGATGAGGGAA-TGCAACGGTACCAGTGGAGA-GGGGACCACACGATCAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581430 163 - 5823884 CCAG-TGGGGTGTGA--CTCTCCTCCTAACTCTGGCAGAGC---CTGCTCGTTCGGGCGGTGGACTTCCTGCCTCCGGGCACA--CACGCCTACTTGGATGAGGGAA-CGCAGTGGTACCAGTGGAGA-GGGGACCACACGATAAGC-TTTCCAAT----ATATCTAGACCTTTCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61211 164 + 372756 CCAG-TGGGGTGTGAGCCTCTCTTCCTAGCTTTGACAGAACCTGCTGCTCGTTAGGATGG-----TTCCTGCCTCTGGGCACACACATGCCTGCTTGGGTGCAGGAA-TGCAATGGTGCCAGTGGAGA-GGGGACCGCACCACTAGT-TTTCC-AT----ATATCTAGACCTTTCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297601 166 + 16356641 CCAG-TGGGGTGCGAGCCTCTCTTCCTAGCTTTGACAGAAC---TTGCTTGTTAGGATAGAGGACTTCCTGGCTCTGGGCACACCCATGCCTGCTTGGATGCAGGAA-TGCAACGGTGCCAGTGGAGA-GGGAACCCCACCATTAAT-TTTCC-AT----ATATCTGGACTTTTGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166783 166 + 1231380 CCAG-TGTGGTGCGAGCCTCTCTTCCTGGCTTTGACAGAAC---CTGCTCATTGGGATGGAGGACTTCCGGCCTCTGGGCACACACATGCCTGCTTGGATGCAGGAA-TGCAATGGTGCCACTGGAGA-GGGGACCCCACCATTAGT-TTTCC-AT----ATATCTGGACCTTTGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2698917 165 + 11732439 CCAG-TGGGGCGCAAGCCTCTCTTCCTAGCTCTGACAGAAC---CTGCTCGTTAGGATGGAGGACTTCCTGCCTTTGGGCACACACATGCCTGCTTGGATGCAGGAA-TGCAGCGGTGCCA-TGGAGA-GGGGACCGCACCATTGGT-TTTCC-AT----GTGTCTAGACCTTTCTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22860645 126 + 22939663 CTGG-CTGGGTGTGAGCCTCTTGGTCTAACTTTGGCCGAAC---CTGCTCAGTAGGATGGAGGCCTT------------------CACG-----------------------AGGGTGCCAGTGGAGA-GGGGAACGCAAAAGGAAC-TTTCT-GT----ATAATGTGACCTTTCAGG i otoGar3.GL873542 I 1 I 294 s mm10.chr2 181805785 146 + 182113224 CCTC-TGGGATGAG----TTTTTTCTGAACACTAGCAGACT---CTGCTGGCCATTCTCAAGCAT-------CTCCAAGCACA--TGCACTTACTTGGA---AGCTA-TGC--CGGCATTGCTGGGAA-GGGG--CTAAAAATCAGT-TTTCC-AC----TCGTCTGAATCTTTCTGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47619808 91 + 47698779 CCAGCTACGGCGTGGACATCTGT-----------------C---CCGCTCGCTTGGGTG------TCCTTACGCACGGGCAC---CACG---------------------------TAGCACTCAGAA-GG-------------AGC-CTTT--GT----AGATCTGG---------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258385 132 - 397369 ----------------CCTCGCCTCC---CTTTGG--GAAC---GTGTTTGTTAGGG--------TTCATGT------GCACA--TACACCCACTTACACGAAGATACTGCCACGATGCCCGTGGAGA-G-----CACAGACTTAGTGTCTGCAATTTAGACACTTAGACCTTCTGGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1872839 268 - 2029793 I e micMur3.chr18 56877636 650 + 57149010 I a score=774030.000000 s hg38.chr20_KI270870v1_alt 126843 66 + 183433 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCATGAGAGTGATTT------TGCAGCTACAGTACA s panTro5.chr20 66453050 66 + 66533130 ATATACTGGTGACAT----CGTGATTGCTAAGAACATCGTGCATGAGAGTGATTT------TGCAGCTACAGTACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128096 66 + 62195757 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCATGAGAGTGATTT------TGCAGCTACAGTACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517179 66 - 578057 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCATGAGAGTGATTT------TGCAGCTACAGTACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039215 66 - 110113093 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCGTGAGAGTGATTT------TGCAGCTACAGTACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92772818 66 - 92844088 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCATGAGAGTGATTT------TGCGGCGACAGTACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439076 66 + 96509753 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCATGAGAGTGATTT------TGCGGCGACAGTACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16909983 66 - 16982598 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCATGAGAGTGATTT------TGCGGCGACAGTACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713101 66 - 3785965 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCATGAGAGTGATTT------TGCGGCTACAGTACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291449 66 - 90373283 ATATACTGGTGACAT----CGTGATTGCCGAGAACATCGTGCACGAGAGTGATTT------TGTGGCTACAGTACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105548 66 - 179258 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCATGAGAGTGATTT------TGCGGCTACAGTACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581593 66 - 5823884 ATATACTGGTGACAT----CGTGATTGCTGAGAACATCGTGCATGAGAGTGATTT------TGCGGCTACAGTACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61375 66 + 372756 ATATACTGGTGACAT----CATGATTACTGAGAACATCGTGTTTGAGAATGATTT------TGTGGCTACGGTACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297767 66 + 16356641 ATATACTGCTGACAT----CGTGATTACTGAGAACATCGTGTTTGAGAGTGATTT------TGTGGCTACAGTACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1166949 66 + 1231380 ATATACTGGTGACAT----TGTGATTACTGAGAACATTGTGTTTGAGAGTGATTT------TGTGGCTATAGTACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699082 66 + 11732439 ATACACTGGTGACAT----CGTGATTGCTGAGAACATCGTGTTTGAGAGTGATTT------TGTGGCTACAGTACG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22861065 76 + 22939663 aTATACTCATGACATTGTATGTGGTTACTCAGAATATGGTGCATAAGAACGATTTTATGAGTATGGTTACAGTATA i otoGar3.GL873542 I 294 C 0 s mm10.chr2 181805931 66 + 182113224 AAATAACGGTGGTTT----CTTACTTACTCACAATATCACTTCTGAGGGTGATTT------TAAAACTGCAGCATA i mm10.chr2 C 0 C 0 s canFam3.chr24 47619899 65 + 47698779 ATTTCCTGGCGGGAC----CGTGA-TATCAGGAATGTCATCCCTGAGAGTTACTT------CATGACCACAATAGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258517 43 - 397369 ACATGCCTGTGCAAT----GGTCACTA--------------TGTGTGAGTGACAG----------GCTACG----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1872839 268 - 2029793 I e micMur3.chr18 56877636 650 + 57149010 I a score=51170.000000 s hg38.chr20_KI270870v1_alt 126909 4 + 183433 ATTG s panTro5.chr20 66453116 4 + 66533130 ATTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128162 4 + 62195757 ATTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517245 4 - 578057 ATTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039281 4 - 110113093 ATTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92772884 4 - 92844088 ATTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439142 4 + 96509753 ATTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910049 4 - 16982598 ATTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713167 4 - 3785965 ATTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291515 4 - 90373283 ATTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105614 4 - 179258 ATTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581659 4 - 5823884 ATTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61441 4 + 372756 ATTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297833 4 + 16356641 ATTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167015 4 + 1231380 ATTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699148 4 + 11732439 ATCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56878286 4 + 57149010 ATTG i micMur3.chr18 I 650 C 0 s otoGar3.GL873542 22861141 4 + 22939663 ATTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181805997 4 + 182113224 ATTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47619964 4 + 47698779 AGTA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258560 4 - 397369 ATCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1872839 268 - 2029793 I a score=1474796.000000 s hg38.chr20_KI270870v1_alt 126913 110 + 183433 CTAGAAAAGATAACATTCTGTGCCTTCATTTGTCATGTTCATTTGAGCAATAATGTTAC-TTTTTTAAGGCAGTGATGGTTACCGGGGACACC-AAGTCAGCCTAAATATGG s panTro5.chr20 66453120 110 + 66533130 CTAGAAAAGATAACATTCCGTGCCTTCATTTGTCATGTTCATTTGAGCAATAATGTTAC-TTTTTTAAGGCAGTGATGGTTACCGGGGACACC-AAGTCAGCCTAAATATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128166 110 + 62195757 CTAGAAAAGATAACATTCCGTGCCTTCATTTGTCATGTTCATTTGAGCAATAATGTTAC-TTTTTTAAGGCAGTGATGGTTACCGGGGACACC-AAGTCAGCCTAAATATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517249 110 - 578057 CTAGAAAAGATAACATTCCGTGCCTTCATTTGTCATGTTCATTTGAGCAATAATGTTAC-TTTTTTAAGGCAGTGATGGTTACCGGGGACACC-AAGTCAGCCTAAATATGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039285 110 - 110113093 CTAGAAAAGATAACATTCCGTGCCTTCATTTGTCATGTTCATTTGAGCAATAATGTTAC-TTTTTTAAGGCAGTGACGGTTACTGGGGACACC-AAGTCAGCCTAAATATGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92772888 110 - 92844088 CTAGAAAAGATAACATTCCGTGCCTTCATTCGCCATGTTCATTTGAGCAGTAATGTTAC-TTTTTTGAGGCAGTGATGGTTACTGGGGACACC-AAGTCAGCCTAAATATGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439146 110 + 96509753 CTAGAAAAGATAACATTCCGTGCCTTCATTCGCCATGTTCATTTGAGCAGTAATGTTAC-TTTTTTGAGGCAGTGATGGTTACTGGGGACACC-AAGTCAGCCTAAATATGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910053 110 - 16982598 CTAGAAAAGATAACATTCCGTGCCTTCATTCGCCATGTTCATTTGAGCAGTAATGTTAC-TTTTTTGAGGCAGTGATGGTTACTGGGGACACC-AAGTCAGCCTAAATATGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713171 110 - 3785965 CTAGAAAAGATAACATTCCGTGCCTTCATTCGCCATGTTCATTTGAGCAGTAATGTTAC-TTTTTTGAGGCAGTGATGGTTACTGGGGACACC-AAGTCAGCCTAAATATGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291519 110 - 90373283 CTAGAAAAGATAACATTCCGTGCCTTCATTCGCCATGTTCATTTGAGCAGTAATGTTAC-TTTTTTGAGGCAGTGATGGTTACTGGGGACACC-AAGTCAGCCTAAATATGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105618 110 - 179258 CTAGAAAAGATAACATTCCGTGCCTTCATTCGCCATGTTCATTTGAGCAGTAATGTTAC-TTTTTTGAGGCAGTGATGGTTACTGGGGACACC-AAGTCAGCCTAAATATGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581663 90 - 5823884 CTAGAAAAGATAACATTCCGTGCCTTCATTCGCCATGTTCATTTGAGCAGTCATGTTAC-TTTTTTGAGGCAGTGATGGTTA---------------------TAAATATGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61445 92 + 372756 CTAGAAAAGATGACATTCCATGCCTTCATTTGTCATGTTCATTTGAGCAAT-------------------CAGTGACGGTTACTGGGGACACC-AAGTCAGCCTAAATATGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297837 109 + 16356641 CTAGAAAAGATGACCTTCCATGCCTTCA-TTGTCATGTTCATTTGAGCAATAATGTTGC-TTTTTTAAGGCAGTGTCCATTACTGGGGACACC-AAATCAGCCTAAATATGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167019 108 + 1231380 CTAGAAAAGATGACATTCCATGCCTTCA-TTGTCATGTTTGTTTGAGCAATAATGTTAC-TTTTTAAGG-CAGTGACGGTTACTGGGGACACC-AAGTCAGCCTAAATATGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699152 111 + 11732439 CTAGAAAAGATGACATTCCATGCCTTCATTTGTCATGCTCATTTGGGCAATGATGTTACTTTTTTTAAGGCAGCGACGGTTACTGGGGACACC-AAGTCAGCCTGAATATGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56878290 111 + 57149010 CTGGAAAAGATAACATTTTATGCCTTATTTTGTCTTGTTTGTTTGAACAATAATATTAC-TCTATTAAGGCAGTGACTATTACTGGGGACACCAAAATCAGCCTAAATATGG i micMur3.chr18 C 0 I 257 s proCoq1.NW_012150197v1 1873107 111 - 2029793 CTAAAAAAGATAACATTTTATGCCTTAATCTGTCCTGTTTATTCGAACAATAATGTTAC-TCCATTAAGGCAGTGACTATTACTGGGGACACCAAAGTCAGCCTAAATATGG i proCoq1.NW_012150197v1 I 268 C 0 s otoGar3.GL873542 22861145 111 + 22939663 CTGGAAAGAATAACATTTTATGTTTCCATTCATCATATTTATTTGGACAATAATGTTAT-ACCATTAAGGCAGTGACTATTACTGGAGACATCCAAGTCATCCTAAATATGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806001 88 + 182113224 CTAGAAAA---AAAATACTATACACTTA-------------------CAGTAATATTGC-TTTATTAAGGAAGCAGTAATTATTGGGGACATA-AAGTCAGTGAAAGCATAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47619968 88 + 47698779 CCAGAAAAGATAGCATTTTATGCCCTC-TTGGTCATGTTTGTGTGAATAATAACAGCAC-CACACTGAAGTGG----GATTA-TGGCGACACC-AA---------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258564 104 - 397369 CTAGCAAGAA-AACATGCCATTTTTATGTTTTACA---ATATTTAAGCAATAATGTTGC---TGTAAAGGCAGTGACCATCACTGGGAAGTCA-AAGTCTGTCTAAATATGG i dasNov3.JH569290 C 0 C 0 a score=934354.000000 s hg38.chr20_KI270870v1_alt 127023 96 + 183433 GTACACCCTTTTGAGATCATGGGACAAAA-TTTTCCTATTTGGGCGA---TATGGCA-AACACT-CATCC------TATTCACAGAATGCT----TCAG-------------------------------------------------------TTTCTGATAGACA s panTro5.chr20 66453230 96 + 66533130 GTACACCCTTTTCAGATCATGGGACAAAG-TTTTCCTATTTGGGCGA---TATGGCA-AACACT-CACCC------TATTCACACAATGCT----TCAG-------------------------------------------------------TTTCTGATAGACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128276 96 + 62195757 GTACACCCTTTTCAGATCATGGGACAAAG-TTTTCCTATTTGGGCGA---TATGGCA-AACACT-CACCC------TATTCACACAATGCT----TCAG-------------------------------------------------------TTTCTGATAGACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517359 96 - 578057 GCACACCCTTTTGAGATCTTGGGACAAAA-TTTTCCTATTTGGGCGA---TATGGCA-AACACT-CGTCC------TATTCACAGAACGCT----TCAG-------------------------------------------------------TTTCTGATAGACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039395 96 - 110113093 GTACACCCTTTTGAGATGATGTGACAAAA-TTTTCCTATTTGGGCGA---TATGGCA-AACACT-CATCC------TGTTCACAGAATGCT----TGAG-------------------------------------------------------TTTCTGATAGACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92772998 94 - 92844088 GTACACCCTTTTGAGATGATGTCACAGAA-TTTTCCTATTTGGGCGA---TACGGC---ACACT-CATCC------TATTTACAGAATGCT----TCCG-------------------------------------------------------TTTCTGATAGACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439256 94 + 96509753 GTACACCCTTTTGAGATGATGTCACAGAA-TTTTCCTATTTGGGCAA---TACGGC---ACACT-CATCC------TATTTACAGAATGCT----TCCG-------------------------------------------------------TTTCTGATAGACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910163 94 - 16982598 GTACACCCTTTTGAGATGATGTCACAGAA-TTTTCCTATTTGGGCGA---TACGGC---ACACT-CATCC------TATTTACAGAATGCT----TCCA-------------------------------------------------------TTTCTGATAGACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713281 94 - 3785965 GTACACCCTTTTGAGATGATGTCACAGAA-TTTTCCTGTTTGGGCGA---TACGGC---ACACT-CATCC------TATTTACAGAATGCT----TCCG-------------------------------------------------------TTTCTGATAGACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291629 94 - 90373283 GTACACTCTTTTGAGATGATGTCACAAAG-TTTTCCTATTTGGGCGA---TACGGC---ACACT-CATCC------TATTTACAGAACGCT----TCAG-------------------------------------------------------TTTCTGATAGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105728 94 - 179258 GTACACCCTTTTGAGATGATGTCACAGAA-TTTTCCTATTTGGGCGA---TACGGC---ACACT-CATCC------TATTTACAGAATGCT----TCCG-------------------------------------------------------TTTCTGATAGACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581753 94 - 5823884 GTACACCCCTTTGAGATGATGTCACAAAT-TTTTCCTATTTGGGCGA---TACGGC---ACACT-CATCC------TATTTACAGAATGCT----TCAG-------------------------------------------------------TTTCTGATAGACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61537 95 + 372756 GTACACCCTTTTGAGATGATGTGACAAAA---TGCCCATTTGGGGGA---TGTGGCAGAACACT-TATCT------TATCCACAGAATGCT----TTAG-------------------------------------------------------TTTCTGATAGACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16297946 95 + 16356641 GTACACCCTTTCGAGATGATGTGACAAAA---TTCCCATTTGGGTGA---TGTGGCAGAACACT-TATCC------TATTCACAGAATGCT----TCAG-------------------------------------------------------TTACTGATAGACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167127 95 + 1231380 GTACACCCTTTTGAGATGATGTGACAAAA---TTCCCATTTGGGTGA---TGTGGCAGGACACT-TATCC------TCTTCACAGAATGCT----TCAG-------------------------------------------------------CTTCTGATAGACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699263 95 + 11732439 GTACACCCTTTTGAGATGATGTGACAAAA---TTCCCATTTGGGTGA---TGTGGCAGAACACT-TTTCC------TGTTCACAGAATGCT----TCAG-------------------------------------------------------TTTCTGATAGACA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1873218 101 - 2029793 TAACACCCTTTGGAGATGCTGTGACA-AA-ATTTCCTACTCGAGTGA---TATTCCA-AACACT-CATCCTATGGATATTTACAGAAATCT----TCAG-------------------------------------------------------TTGCTGATAGACA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22861256 108 + 22939663 TCACACCCTTTTTAGATGATGTGAC---A-TTTTCCTGCTTGAGTGA---TATTCCA-AACACT-CATCC------TATTTACAGAATTCT----TCAGTTTCTCAACAAGCGT----------------------------------------TTGCCAATGGACA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806089 97 + 182113224 -TAACATCTTTTGAGAGGAC------AAA-CTTTCC-----AGGTGCATTTATCCCA-AATATG-TATCT------TATTTACAGAATTATAGAATCAA---------AAGTAT----------------------------------------TTGTTGGTGAACA i mm10.chr2 C 0 I 2 s canFam3.chr24 47620056 133 + 47698779 --------------GATGTTGTGGCAAAAATTTTCCTGCTTGAATGA---CATTCTG-TCCATT----CC------TGTTTACAGAATTCT----TTAC--TCCCAGTAAGCGTGCCCCGTAGCCAGTtttttttttaatattttttttatttattcatgagagaca i canFam3.chr24 C 0 I 152 s dasNov3.JH569290 258668 108 - 397369 -CAACCCTCTTCGAGATGTTGTTATA-AA-TGCCCTTACATGAGCCA---TTT--CAGGGCATTGCATCC------TGCTGGAGGAGTCTT----TGAT-TTCCCAGTAAGCAT----------------------------------------TTGCTGTTAGACA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56878401 257 + 57149010 I a score=940840.000000 s hg38.chr20_KI270870v1_alt 127119 70 + 183433 AGTTATT---------TTTGTTTGAAA-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTACTCCTTTTGCCCAAATTT s panTro5.chr20 66453326 70 + 66533130 AGTTATT---------TCTGTTTGAAA-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTACTCCTTTTGCCCAAATTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128372 70 + 62195757 AGTTATT---------TCTGTTTGAAA-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTACTCCTTTTGCCCAAATTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517455 70 - 578057 AGTTATT---------TTTGTTTGAAA-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTACTCCTTTTGCCCAAATTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039491 70 - 110113093 AGTTATT---------TTTGTTTGAAA-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTACTCCTTTTGCCCAAATTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773092 70 - 92844088 AGTTATT---------TTTGTTTGAAG-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTATTCTTTTCGCCCAAATTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439350 70 + 96509753 AGTTATT---------TTTGTTTGAAG-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTATTCTTTTCGCCCAAATTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910257 70 - 16982598 AGTTATT---------TTTGTTTGAAG-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTATTCTTTTCGCCCAAATTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713375 70 - 3785965 AGTTATT---------TTTGTTTGAAG-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTATTCTTTTCGCCCAAATTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291723 70 - 90373283 AGTTATT---------TTTGTTTGAAG-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTATTCTTTTTGCCCAAATTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105822 70 - 179258 AGTTATT---------TTTGTTTGAAG-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTATTCTTTTCGCCCAAATTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581847 70 - 5823884 AGTTATT---------TTTGTTTGAAA-TATCAGGGCTGCTGGAATGT-CTTGGAGGCTTTTATTCTTTTTGCCCAAATTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61632 70 + 372756 AGTTATT---------TTTGTTTGAAA-TATCAGGGCTGCTGGCATGT-CTTGGAGACTTTTAATCTTTCTGCCCACATTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298041 70 + 16356641 AGTTATT---------TTTGTTTGAAA-TATCAGGGCTTCTGGGATGT-CCTGGAGACTTTTACTCTTTCTGCCCATGTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167222 70 + 1231380 AGTTATT---------TTTGTTTGAAA-TATCAGGACTGCTGGGATGT-CCTGGAGATGTTTACTCTTTCTGCGCACGTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699358 68 + 11732439 AGTTATT---------TTTGTTTGAAA-TATCAGGGCTGCTGGGATGC-CTTGGAGAC--TTACTCTTTCTGCCCACATTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1873319 70 - 2029793 AAATG-T---------TTTGTTTGAAA-TGTCAGGGCTGCTGGGATATCGTTGAAGGGTTTTTCTCTTTCTGCCCAAATTT i proCoq1.NW_012150197v1 C 0 I 148 s otoGar3.GL873542 22861364 68 + 22939663 AGTTATT---------TTTGTTTGAAA-CATCAGGACTATTGGAAT---TTTAGATAGTTTTGCTCTTTATGCCCAAATTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806188 81 + 182113224 GGTTTTTTCCCTGTTGTTTGTTTGAAGTTATTAAGTCTGTTAGAGTATATTTCTAGAGTTTTCTTATTTCTGCCCAAATTT i mm10.chr2 I 2 I 4 s canFam3.chr24 47620341 71 + 47698779 AGTTTGC---------ATTTATTGGTA-CGTCAGAGACACTGGCACGTCTTTGCAGGGTTTTGCTCTCTCTGCCCAAATTT i canFam3.chr24 I 152 C 0 s dasNov3.JH569290 258776 67 - 397369 ---TGTT---------TTTGTTGGCAC-TATCATGGCTGCTGAAACAT-CTCTGGGTGGTTTTCTCTTTTTCTCCAAATTT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56878401 257 + 57149010 I a score=986609.000000 s hg38.chr20_KI270870v1_alt 127189 97 + 183433 TCACTGAGCCAGAAACAAGATTGTCTCCTC-AGTCCCCTAGAGGAGGGTGGGTGGGAGTGAGGTGTGTGAGGACTTGGGACTGGGACGGGTGGCCAAG s panTro5.chr20 66453396 97 + 66533130 TCACTGAGCCAGAAACAAGATTGTCTCCTC-AGGCCCCCAGAGGAGGGTGGGTGGGAGTGAGGTGTGTGAGGACTTGGGACTGGGATGGGTGGCCAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128442 97 + 62195757 TCACTGAGCCAGAAACAAGATTGTCTCCTC-AGTCCCCCAGAGGAGGGTGGGTGGGGGTGAGGTGTGTGAGGACTTGGGACTGGGATGGGTGGCCAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517525 97 - 578057 TCACTGAGCCAGGAACAAGATTGTCTCCTC-AGTCCCCTAGAGGAGGGTGGGTGGGAGTGAGGCGTGTGAGGACTTGGGACTGGGATGGGTGGCCAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039561 97 - 110113093 TCACTGAGCCAGAAACGAGATTGTCTCCTC-AGTCCCCTACAGGGGGGTGGCTGGGAGCGAGGTGTGTGAGGACTTGGGACTGGGATGGGTGGCCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773162 97 - 92844088 TCACTGAGCCAGAAACGAGATTGTCTCCTC-AGTCCCCTAGAGTAGGGTGGGTGGGAATGAGGTGTGTGAGGACATGGGACTGGGATGGGTGGCCAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439420 97 + 96509753 TCACTGAGCCAGAAACGAGATTGTCTCCTC-AGTCCCCTAGAGGAGGGTGGGTGGGAATGAGGTGTGTGAGGACATGGGACTGGGATGGGTGGCCAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910327 97 - 16982598 TCACTGAGCCAGAAACGAGATTGTCTCCTC-AGTCCCCTAGAGGAGGGTGGGTGGGAATGAGGTGTGTGAGGACATGGGACTGGGATGGGTGGCCAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713445 97 - 3785965 TCACTGAGCCAGAAACGAGATTGTCTCCTC-AGTCCCCTAGAGGAGGGTGGGTGGGAATGAGGTGTGTGAGGACATGGGACTGAGATGGGTGGCCAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291793 97 - 90373283 TCACTGAGCCAGAAACGAGACTGTCTCCTC-AGTCCCCTAGAGGAGGGTGGGTGGGAATGAGGTGTGTGAGGACATGGGACTGGGATGGGCGGCCAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105892 97 - 179258 TCACTGAGCCAGAAACGAGATTGTCTCCTC-AGTCCCCTAGAGGAGCGTGGGTGGGAATGAGGTGTGTGAGGACATGGGACTGGGATGGGTGGCCAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5581917 98 - 5823884 TCACTGAGCCAGAAATGAGATTGTCTCCTCAAGTCCCCTAGAGGAGGGTGGGTGGGAATGAGGTGTGTGAGGACATGGGACTGGGGTGGGTGGCCAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 61702 88 + 372756 TCATTGAGCCAGAAATGAGATTGTCT----------TCTGAAGGAGGGTGGGTGGGAGTGAGGTATGTGAGGGCCTGGGAGTGGCATGGGTGGCCAAG i calJac3.chrUn_GL286459 C 0 M 1000 s saiBol1.JH378156 16298111 96 + 16356641 TCATTGAGCCAGAAACGAGATCGTCTCCTC-AGTTCCCTAAAGGAGGGTGGGTGGGAGTGAGGTATTTGAGGGCCTGGGAGTGGGAT-GGTGGCCAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167292 96 + 1231380 TCATTGAGCCAGAAATGAGATTGTCTCCTC-AGTTCCCTAAAGGAGGGTGGGTGGGAGTGAGGTATGTGAAGGCCTGGGAGTGG-ATGGGTGGCCAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699426 97 + 11732439 TCATTGAGCCAGAAATGAGATTGTCTCCTC-AGTTCCCTAAAGGAGAGTGACTGGCAGTGAGGTGTGTGAAGGCCTGGGAGTGGGATGGGTGGCCAAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22861432 74 + 22939663 TGGTCAGGCTAGAAGTGATATTGCCTCCTC-AGTGCCCTGAAGGGGAACAGGTGGGAGTGGGGTGT-----------------------GTGGCCAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806273 74 + 182113224 CCAAAAGGTCAGAAATGAGA-TGCATTTTC-AGTGCTGGAGACAAGAGCAG-TAGAAGTGAG-----CGATAATGTGGGAGT---------------- i mm10.chr2 I 4 C 0 s canFam3.chr24 47620412 86 + 47698779 TAGAAGAGCCGGAAATG-----GCCCCCCG-AATGCCCTCCTAGAGGGTGGGTAGGCGTGTGCCGT--GGGCACCTGGGAC-GCGGTGGACGGCC--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258843 66 - 397369 TGATCAGGCCAG-AATGTGACTG---CCTC-AGTACCCAGCAGGCTGGCAGGGAGGGAGGGGGTGCACGGG--------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873389 148 - 2029793 I e micMur3.chr18 56878401 257 + 57149010 I a score=129218.000000 s hg38.chr20_KI270870v1_alt 127286 19 + 183433 CCCCTGGCCCACTTCGATA s panTro5.chr20 66453493 19 + 66533130 CCCCTGGCCCACTTCCATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128539 19 + 62195757 CCCCTGGCCCACTTCGATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517622 19 - 578057 CCCCTGGCCCACTTCGATA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039658 19 - 110113093 CCCCTGGCCCACTTCGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773259 19 - 92844088 CCCCTGGCCCACGTCAACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439517 19 + 96509753 CCCCTGGCCCACGTCAACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910424 19 - 16982598 CCCCTGGCCCACGTCAACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713542 19 - 3785965 CCCCTGGCCCACGTCGACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291890 19 - 90373283 CCCCTGGCCCACCTCGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 105989 19 - 179258 CCCCTGGCCCACGTCGACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582015 19 - 5823884 CCCCTGGCCCACTTCGACA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16298207 18 + 16356641 CCCCTGGCCCACCTCAAC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167388 18 + 1231380 CCCCTGGCCAACGTCGGC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699523 18 + 11732439 GCCCTGGCCCACTTTGAC- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22861506 14 + 22939663 CCCTTTGTGCACTT----- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47620498 17 + 47698779 CCCCACGCCCGCCCCCG-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258909 13 - 397369 GCTCTAGCTCCTT------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873389 148 - 2029793 I e mm10.chr2 181806347 0 + 182113224 C e micMur3.chr18 56878401 257 + 57149010 I e calJac3.chrUn_GL286459 61790 1000 + 372756 M a score=322030.000000 s hg38.chr20_KI270870v1_alt 127305 33 + 183433 TAGCTGTGCCCTGGGCCCTCCCATCCCTCCCAA s panTro5.chr20 66453512 33 + 66533130 CAGCTGTGCCCTGGGCCCTCCCATCCCTCCCAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128558 33 + 62195757 CAGCTGTGCCCTGGGCCCTCCCATCCCTCCCAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517641 33 - 578057 TAGCTGTGCCCTGGGCCCTCCCATCCCTCCCAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039677 33 - 110113093 TAGCTGTGCCCTGGGCCCTCCCATCCCTCCCAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773278 33 - 92844088 TAGCTGTGCCCTGGGCCCTCGAATCGCTCCCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439536 33 + 96509753 TAGCTGTGCCCTGGGCTCTCGAATCGCTCCCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910443 33 - 16982598 TAGCTGTGCCCTGGGCCCTCGAATCGCTCCCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713561 33 - 3785965 TAGCTGTGCCCTGGGCCCTCGAATCGCTCCCAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291909 33 - 90373283 TAGCTGTGCCCTGGGCCCTCGAATCGCTTCCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106008 33 - 179258 TAGCTGTGCCCTGGGCCCTCGAATCGCTCCCAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582034 33 - 5823884 TAGCTGTGCCCTGGGCCCTCGAATCGCTCCCAA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16298225 32 + 16356641 -AGCTGTGTCCTGGGCCCTCCCATCCCTCCCAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167406 32 + 1231380 -AGCTGTGCCCTGGGCCCTCCCATCCCTCCCAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699541 32 + 11732439 -AGCTGTGCGCTGGGCCCTCCCATCCCTCCCAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56878658 33 + 57149010 TAGCTGTGCCCTGGGCCCTCCCCGCCCTCCCAA i micMur3.chr18 I 257 I 45 s otoGar3.GL873542 22861520 12 + 22939663 -----------TGGGCCCTCCCA---------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806347 18 + 182113224 --GCTATGCCTTGACCCCTA------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47620515 32 + 47698779 TGGCTGTGCCC-GCGTACTCCCAGCCATCCCAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258922 19 - 397369 --GCAGCGCCCTCCCCACTCA------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873389 148 - 2029793 I e calJac3.chrUn_GL286459 61790 1000 + 372756 M a score=477449.000000 s hg38.chr20_KI270870v1_alt 127338 52 + 183433 AGTGCCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTA s panTro5.chr20 66453545 52 + 66533130 AGTGCCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128591 52 + 62195757 AGTGCCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517674 52 - 578057 AGTGCCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039710 52 - 110113093 AGTGCCCCCTCCCCACTGACTTGTCCGA-GTTGCTGCCTCTT-TTCAAGTTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773311 52 - 92844088 AGTCCCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439569 52 + 96509753 AGTCCCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910476 52 - 16982598 AGTCCCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713594 47 - 3785965 AGTCCCCCCTCCCCACTGACTTGTC------TGCTGCCTCTT-TTCAAGTTGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291942 52 - 90373283 AGTCCCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106041 52 - 179258 AGTCCCCCCTCCCCACTGACTTGTCTGC-ATTGCCGCCTCTT-TTCAAGTTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582067 52 - 5823884 AGTCCCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16298257 51 + 16356641 AGT-CCTCCTCCCCACTGACTTGTCTGT-ATTGCTGCCTCTT-TTCAAGTTGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167438 51 + 1231380 AGT-CCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699573 51 + 11732439 AGT-CCCCCTCCCCACTGACTTGTCTGC-ATTGCTGCCTCTT-TTCAAGTTGTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22861532 45 + 22939663 -------ATGTCCCTGTGATGCGTCTGC-AGTGTCACCTGTG-TTCAAGCTGTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806365 39 + 182113224 ---GCTCTCTCCCT----ATTTGTCTGCTGCTTCTATCTTTG-TCTA------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47620547 43 + 47698779 ------GGTTCGCCACTGG---GTCTGT--TGGCCACCTCCCATTCAAGTTGCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258941 43 - 397369 AGTGCCCTGGCC----------GCCTGC-AGCGCTGCCTCCTGGTCCAGCTGAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873389 148 - 2029793 I e micMur3.chr18 56878691 45 + 57149010 I e calJac3.chrUn_GL286459 61790 1000 + 372756 M a score=15964.000000 s hg38.chr20_KI270870v1_alt 127390 2 + 183433 -TA s panTro5.chr20 66453597 2 + 66533130 -TA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128643 2 + 62195757 -TA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517726 2 - 578057 -TA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039762 2 - 110113093 -TA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773363 2 - 92844088 -TA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439621 2 + 96509753 -TA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910528 2 - 16982598 -TA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713641 2 - 3785965 -TA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291994 2 - 90373283 -TA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106093 2 - 179258 -TA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582119 2 - 5823884 -TA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16298308 2 + 16356641 -TA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167489 2 + 1231380 -TA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699624 2 + 11732439 -TG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1873537 2 - 2029793 -TA i proCoq1.NW_012150197v1 I 148 C 0 s otoGar3.GL873542 22861577 2 + 22939663 -TG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806404 2 + 182113224 -TG i mm10.chr2 C 0 C 0 s canFam3.chr24 47620590 2 + 47698779 -TA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258984 2 - 397369 CC- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56878691 45 + 57149010 I e calJac3.chrUn_GL286459 61790 1000 + 372756 M a score=277783.000000 s hg38.chr20_KI270870v1_alt 127392 17 + 183433 TCAGC--CTGGTG-TTGTTC s panTro5.chr20 66453599 17 + 66533130 TCAGC--CTGGTG-TTGTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128645 17 + 62195757 TCAGC--CTGGTG-TTGTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517728 17 - 578057 TCAGC--CTGGTG-TTGTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039764 17 - 110113093 TCAGC--CTCGTG-TTGTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773365 17 - 92844088 TCAGC--CTGGTG-TTGTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439623 17 + 96509753 TCAGC--CTGGTG-TTGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910530 17 - 16982598 TCAGC--CTGGTG-TTGTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713643 17 - 3785965 TCAGC--CTGGTG-TTGTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90291996 17 - 90373283 TCAGC--CTGGTG-TTGTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106095 17 - 179258 TCAGC--CTGGTG-TTGTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582121 19 - 5823884 TCAGCCTCTGGTG-TTGTTC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16298310 17 + 16356641 TCAGC--CTGGTG-TTGTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167491 17 + 1231380 TCAGC--CTGGTG-TTGTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699626 17 + 11732439 TCAGC--CTGGTG-TTGTTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56878736 17 + 57149010 TCAGC--CTGGTG-TTGTTC i micMur3.chr18 I 45 C 0 s proCoq1.NW_012150197v1 1873539 17 - 2029793 TCAGC--CTGGTG-TTGTTC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22861579 17 + 22939663 TCAGC--CTGGTG-TTGTTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806406 16 + 182113224 TTAGT--CTAG-G-ATGTTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47620592 17 + 47698779 TCCGC--CTGGTG-TTGTTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 258986 15 - 397369 ---TC--CTGGGGCTTGTTC i dasNov3.JH569290 C 0 C 0 e calJac3.chrUn_GL286459 61790 1000 + 372756 M a score=4161787.000000 s hg38.chr20_KI270870v1_alt 127409 219 + 183433 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCGCAGGACGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACGCGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT s panTro5.chr20 66453616 219 + 66533130 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGGGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCGCAGGACGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACGCGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128662 219 + 62195757 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGGGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCACAGGACGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACGCGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517745 218 - 578057 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTT-CCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCGCACGATGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACGCGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110039781 219 - 110113093 CCTTTTTGCAGCCAAAACTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGGGGATCACTTCACCCTCCTCTGCAGGCTTTGACTACTCGCACGACGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACGCGCTGCTGGGAGATGCCCGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773382 219 - 92844088 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCACACGATGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACACGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439640 219 + 96509753 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCACACGATGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACACGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910547 219 - 16982598 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCACACGATGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACACGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713660 219 - 3785965 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTACGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCACACGATGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACACGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292013 219 - 90373283 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCACACGATGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACACGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106112 216 - 179258 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTACGTGAGGAGCACTTCATCCTCTTCTGCA---TTTGACTGCTCACACGATGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACACGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582140 219 - 5823884 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTACTCACACGATGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCCACACGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTCCCCAGCAAGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 62790 218 + 372756 CCTTTTTGCAGCT-AACCTTTCCTAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTATTCGCACGATGCCGAAGCCGCACACATGGCCGCCACCGCCATCCTGAACCTCTCCACGCGCTGCTGGGAGAGGCCTGAGAACCTCAGCATGAAGCCACAGGACCTGCCTAGCAAGGT i calJac3.chrUn_GL286459 M 1000 C 0 s saiBol1.JH378156 16298327 219 + 16356641 CCTTTTTGCAGCTAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTATTCGCACGACGCCGAAGCTGCACACATGGCCGCCACCGCCATCCTGAACCTCTCCACACGCTGCTGGGAGATGCCCGAGAACCTCAGCACGAAGCCACAGGATCTGCCCAGCAAGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167508 219 + 1231380 CCTTTTTGCAGCTAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTATTCTCACGACGCCGAAGCTGCACACATGGCCGCCACCGCCATCCTGAACCTCTCCACGCGCTGCTGGGAGATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTGCCCAGCAAGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699643 219 + 11732439 CCTTTTTGCAGCTAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGTGAGGAGCACTTCATCCTCTTCTGCAGGCTTTGACTATTCACACGACGCCGAAGCCGCACACATGGCCGCCACCGCCATCCTGAACCTCTCCACACGCTGCTGGGAGATGCCCGAGAACCTCAGCACGAAGCCACAGGACCTGCCCAGCAAGGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56878753 219 + 57149010 CCTCTTTGCAGCCAAACCTTTCCCAAAGGCCTCCTCCCCCAGGCACAGCC----CCTCCAGTAGTTATGCGAGGAGCACTTCCTCCTCTTCTGCAGGCTTCGACTACTCGCACGACGCGGAGGCGGCGCACATGGCTGCCACTGCCATCCTGAACCTCTCCACGCGCTGCTGGGAGATGCCCGAGAACCTCAGCACGAAGCCGCAGGAGCCCCCCGGCAAGGT i micMur3.chr18 C 0 I 299 s proCoq1.NW_012150197v1 1873556 218 - 2029793 CCT-TTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGACACAGCC----CCTCCAGTAGTTGTGCGAGGAGCACTTCCTCCTCTTCTGCAGGCTTCGACTACTCCCACGACGCGGAGGCGGCGCACATGGCTGCCACCGCCATCCTGAACCTGTCCACGCGCTGCTGGGAGATGCCTGAGAACCTCAGCACAAAGCCGCAGGACCCCCCCGGCAAGGT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22861596 219 + 22939663 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTCCCCCCAGGCACAGCC----CCTCCAGTAGCCACATAAGGAGCACTTCATCCTCCTCTGCGGGCTTTGACTACTCACAGGACGCCGAGGCTGCACACATGGCTGCCACTGCCATCCTGAACCTCTCTACACGCTGCTGGGAGATGCCCGAGAACCTCAGCACAAAGCCGCAGGACCCCCCTGGCAAGGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806422 220 + 182113224 CCTTTTAGCATCC-AGCCTTTACCAAA-GTCACTTCCTCCAGGTGCAGTCTAATCTTCCAGTGGTTTTATAAGAA-TACTTTATCTTCTTCTGTAGGCTTCGATTACTCTCATGATGCTGAGGCTGCACACATGGCTGCCACAGCCATCCTGAACCTCTCCACTCGATGTTGGGAGATGCCAGAGAACCTCAGCACAAAGCCACAGGACCTCCCCAGCAAGGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47620609 201 + 47698779 CCTTTTTGCAGCCAAACCTTTCCCAAAGGCCTCTTCCCCCAGGCACAGCC----C------------------GTGCACTTCATCCTCTTCTGCAGGCTTTGACTACGCGCACGATGCCGAGGCCGCGCACATGGCCGCCACAGCCATCCTGAACCTCTCCACGCGCTGCTGGGAAATGCCTGAGAACCTCAGCACGAAGCCACAGGACCTGCCCAGCAAGGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259001 212 - 397369 --CCTTCCCAGCCAGACCCCTCCCAAAGGCCTCTT--CCTGGTCCCAGCC----C--CCGGTGCCTTTGTGAAGAGGACCCCG-CCTCTCCCGCAGGCTTTGACTACGCGCACGACGCTGAGGCTGCACACATGGCGGCCACTGCCATCTTGAACCTCTCCACACGCTGCTGGGAGATGCCCGAGAACCTCAGCACCAAGCCGCAGGAGCCCCCCAGAAAGGT i dasNov3.JH569290 C 0 C 0 a score=892288.000000 s hg38.chr20_KI270870v1_alt 127628 94 + 183433 TAGTACATCTGCCACAGAG---CCTTTCTTGGGAGAGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCTGCTCTCTGCACAAAATGTCCCTAGGAA s panTro5.chr20 66453835 94 + 66533130 TAGTACATCTGCCACAGAG---CCTTTCTTGGGAGAGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCCGCTCTCTGCACAAAATGTCCCTAGGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128881 94 + 62195757 TAGTACATCTGCCACAGAG---CCTTTCTTGGGAGAGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCCGCTCTCTGCACAAAATGTCCCTAGGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 517963 94 - 578057 TAGTACATCTGCCCCAGAG---CCTTTCTTGGGAGAGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCTGCTCTCTGCACAAAATGTCCCTAGGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040000 94 - 110113093 TAGTGCATTTGCCACAGAG---CCTTCCTTGGGAGAGGTGAGTTGGTGGAATCTGCAGTCAGGCCCACCTGCTCTCTGCACAAAATGTCCCTAGGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773601 86 - 92844088 CAGTGCGTCCGC-----------CTTTCTTGGGAGGGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCTGCTGTCCGCACAAAATGTCTCTAGGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439859 82 + 96509753 CAGTGCGTCCGC---------------CTTGGGAGGGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCTGCTGTCCGCACAAAATGTCTCTAGGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910766 86 - 16982598 CAGTGCGTCCGC-----------CTTTCTTGGGAGGGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCTGCTGTCCGCACAAAATGTCTCTAGGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713879 86 - 3785965 CAGTGCGTCCAC-----------CTTTCTTGGGAGGGGTAAGTTGGTGGAATTTGCAGTCAGGCCCACCTGCTGTCCGCACAAAATGTCTCTAGGAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292232 86 - 90373283 CAGTGCGTCCGC-----------CTTTCTTGGGAGGGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCTGTTGTCCACACAAAATGTCCCTAGGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106328 86 - 179258 CAGTGCGTCCGC-----------CTTTCTTGGGAGGGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCTGCTGTCCGCACAAACTGTCTCTAGGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582359 86 - 5823884 CAGTGCATCCGC-----------CTTTCTTGGGAGAGGTGAGTTGGTGGAATTTGCAGTCAGGCCCACCTGCTGTCCGCACAAAATGTCCCTAGGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63008 91 + 372756 TAGTGCATCCGT-ACAGAG---CCTTTCTTTGGAAAGGTGAGTTGGTGGAAT-TGCAGTCAGGCCTATCCGC-ACCTGCACAAAATGTCCCTAGGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298546 92 + 16356641 TAGTGCCTCCGC-ACAGAG---CCTTTCTTTGGAGAGGTGAGTTGGTGGAAT-TGCAGTCAGACCTGTCCGCTCCCTGCACAAAATATCCCTAGGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167727 92 + 1231380 TAGTGCATCCGC-ACAGAG---CCTTTCTTTGGAGAGGTGAGTTGGTGGAAT-TGCAGTCAGACCTATCCGTTCCCTGCACAAAACATCCCTAGGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699862 92 + 11732439 TAGTGCATCCGC-ACAGAG---CCTTTCTTTGGAGAGGTGAGTTGGTGGAAT-TGCAGTCAGGCCTATCCGCTCCCTGCACAAACTGTCCCTAGGAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1873774 92 - 2029793 TGGTGTGTCCCC-ACAGAG---CCTTTCTGGAGAGAG-CAGGTTGGTGGAGTCTGCAGTCAGGCCCACCAGCTCCCTGCACGGAATGTCCCGAGGAA i proCoq1.NW_012150197v1 C 0 I 295 s otoGar3.GL873542 22861815 92 + 22939663 TGGTGTGTCCCC-ACAGAG---CCTGTCTGAAGAGAGATGAGTTGGTAAAATCTGCCGTCAGGCCTGTCTGCTCCCTGCACAAGAAGTCCCCAGAA- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806642 73 + 182113224 --AAACATACAATCCTGAA---ACCCTTTGGGGAGAGAAGAATGGGTAGAGTTTATACTGAG-------------------AAAATTACAGTAAGGC i mm10.chr2 C 0 I 2 s canFam3.chr24 47620810 94 + 47698779 TGGTGTGTCCCT-GCAAGGAACCCCTCCGAGGCGGAGACGGGCTGGGGAGATTCCCAGTCAGGCCCACATGC-CCCCACAGGAAA-GTGCTTAGGGA i canFam3.chr24 C 0 I 4 s dasNov3.JH569290 259213 71 - 397369 GGGTCTGTCCCC-GCAGGA---GCCCCTTCTGAGGGGGCCAGAAGGGG----CCACACTCTGCCCCACGTGTTCCCTGC------------------ i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56878972 299 + 57149010 I a score=142381.000000 s hg38.chr20_KI270870v1_alt 127722 14 + 183433 TGGCTTGTGCCTAG s panTro5.chr20 66453929 14 + 66533130 TGGCTTGTGCCTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128975 14 + 62195757 TGGCTTGTGCCTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518057 14 - 578057 TGGCTTGTGCCTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040094 14 - 110113093 TGGCTCGTGCCTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773687 14 - 92844088 TGGCTCCTGTCTAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439941 14 + 96509753 TGGCTCCTGTCTAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910852 14 - 16982598 TGGCTCCTGTCTAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713965 14 - 3785965 TGGCTCCTGTCTAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292318 14 - 90373283 TGGCTCCTGTCTAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106414 14 - 179258 TGGCTCCTGTCTAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582445 14 - 5823884 TGGCTCGTGTCTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63099 14 + 372756 TGGCTAGTGTCTAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298638 14 + 16356641 TGGCTAGCGTCTAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167819 14 + 1231380 TGGCTAGTGTCTAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699954 14 + 11732439 TGGCTAGCGTCTAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22861907 14 + 22939663 CAGCTGATGTCTAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181806717 14 + 182113224 TGGCTGGTGCCAAG i mm10.chr2 I 2 I 308 s canFam3.chr24 47620908 9 + 47698779 CGGGTCCTC----- i canFam3.chr24 I 4 C 0 s dasNov3.JH569290 259284 9 - 397369 -----TGTGTCCAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e micMur3.chr18 56878972 299 + 57149010 I a score=384635.000000 s hg38.chr20_KI270870v1_alt 127736 46 + 183433 CTGGCAATTCTCATTCTTAACTTTTTCTCCCTCCTGGCCATGGCC-C s panTro5.chr20 66453943 46 + 66533130 CTGGCAATTCTCATTCTTAACTTTTTCTCCCTCCTGGCCATGGCC-C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62128989 46 + 62195757 CTGGCAATTCTCATTCTTAACTTTTTCTCCCTCCTGGCCATGGCC-C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518071 46 - 578057 CTGGCAATTCTCATTCTTAACTTTTTCTCCCTCCTGGCCATGGCC-C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040108 46 - 110113093 CTGGCAATTCTCATTCTTAACTTTTTCTCCCTCCTGGCCGTGGCC-C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773701 46 - 92844088 CTGGCAATTCTCATTCTTTACTTTTTCTCCCTCCTGGCCATGGCC-C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96439955 46 + 96509753 CTGGCAATTCTCATTCTTTACTTTTTCTCCCTCCTGGCCATGGCC-C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910866 46 - 16982598 CTGGCAATTCTCATTCTTTACTTTTTCTCCCTCCTGGCCACGGCC-C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3713979 46 - 3785965 CTGGCAATTCTCATTCTTTACTTTTTCTCCCTCCTGCCCATGGCC-C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292332 46 - 90373283 CTGGCAATTCTCATTCTTTACTTTTTCTCCCTCCTGGCCATGGCC-C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106428 46 - 179258 CTGGCAGTTCTCATTCTTTACTTTTTCTCCCTCCTGCCCATGGCC-C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582459 46 - 5823884 CTGGCAATTCTCATTCTTTACTTTTTCTCCCTCCTGGCCCTGGCC-C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63113 43 + 372756 TTGTCAATTCTCATTCTTT--CTTTTCTCCCTCCTTGCCACGACC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298652 43 + 16356641 TTGGCAATTCTCATGCTTA--CTTCTCTCCCTCCTGGCCATGGCC-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167833 43 + 1231380 TTGGCAATTCTCATTCTTA--CTTTTCTCCCTCCTGGCCATGTCC-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2699968 44 + 11732439 TTGGCAATCCTCATTCTTA--CTTTTCTCCCTCCTGGCCACGGCCC- i aotNan1.NW_018500483v1 C 0 I 151 s otoGar3.GL873542 22861921 45 + 22939663 TGAGAAATTCTCACTCTTA-CTTTTTATCCTTCCTGGCCTTGGCC-C i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47620917 22 + 47698779 TTGATAGTGATCA------------TCTCCGCTC------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259293 6 - 397369 ----------------------------------TGGCCG------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e mm10.chr2 181806731 308 + 182113224 I e micMur3.chr18 56878972 299 + 57149010 I a score=726768.000000 s hg38.chr20_KI270870v1_alt 127782 88 + 183433 CAAGGACCGCAGAG---CTTGGATGGGTCCACCAGGAGAACCTGGTGTGCTG--------------AGTGAAGGGGGACCAAGGGCTGCGAACA--CAAGTTCCCAC s panTro5.chr20 66453989 88 + 66533130 CAAGGACCGCAGAG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTGCTG--------------AGTGAAGGGGGACCAAGGGCTGCGAACA--CAAGTTCCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129035 88 + 62195757 CAAGGACCGCAGAG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTGCTG--------------AGTGAAGGGGGACCAAGGGCTGCGAACA--CAAGTTCCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518117 88 - 578057 CAAGGACCGCAGAG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTGCTG--------------AGTGAAGGGGGACCAAGGGCTGCGAACA--CAAGTTCCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040154 88 - 110113093 CAAGGACCGCAGAG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTGCTG--------------AGCGGAGGGGGACCAAGGGCTGTGAACA--CAAGTTCCCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773747 88 - 92844088 CAAGGACCACAGAG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTACTG--------------AGTGAAGGGGGACCGAGGGCTGTAAGCA--CAAGTTCCCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440001 88 + 96509753 CAAGGACCACAGAG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTACTG--------------AGTGAAGGGGGACCGAGGGCTGTGAGCA--CAAGTTCCCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16910912 88 - 16982598 CAAGGACCACAGAG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTACTG--------------AGTGAAGGGGGACTGAGGGCTGTGAGCA--CAAGTTCCCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714025 88 - 3785965 CAAGGACCGCAGAG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTACTG--------------AGTGAAGGGGGACCGAGGGCTGTGAGCA--CAAGTTCCCAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292378 88 - 90373283 CAAGGACCGCAGAG---CTTGGATGGGTCCACCAAGAGAACTTGGTATACTG--------------AGCGAAGGGGGACCGAGGGCTGTGAGCA--CAAGTTCCCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106474 88 - 179258 CAAGGACCGCAGGG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTACTG--------------AGCGAAGGGGGACCGAGGGCTGTGAGCA--CAAGTTCCCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582505 88 - 5823884 CAAGGACCGCAGAG---CTTGGATGGGTCCACCAAGAGAACCTGGTGTGCTG--------------AGCGAAGGGGGACCAAGGGCTGTGAGCA--CAAGTTCCCAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63156 90 + 372756 CAAGGACTGCAGAGGTTGTTGGAGGGGTGCACCAAGAGAACCCT-TGCGCTG--------------AGTGAAGGGAGACCAGGGGCTGTGGGCA--CACGCTCCCAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298695 91 + 16356641 CAAGGACTGCAGAGGTTGTTGGAGGGGTTCGCCACGAGAACCCTGTGCGCGG--------------AGTGAAGGGAGACCGGGGGCTGTGAGCA--CAGGCTCCCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1167876 91 + 1231380 CAAGGACTGCAGAGGTTGTTGGAGGGGTCCCCCAAGAGAACCCTGTGCGCTG--------------AGTGAAGGGAGACCTGGGGCTGTGAGCA--CACGCTCCCAC i cebCap1.NW_016107870v1 C 0 I 37 s otoGar3.GL873542 22861966 90 + 22939663 CAATGACTACAGAG---GCCAATGGGTCCTCCCAAGAGAAGTCCATGTGCTG--------------GGCAAAGGTGGATCAAGGTCTGTGTGCGGCCACATCCCCAC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47620939 94 + 47698779 CGAGAGCTGTGTGC---TGTGGAG-----CACCAAGTG---CCTGTGCACAGGCACCTTCCCTCCTGTTCCCTGGAGCCAGAGGGTCGTGCACA--CATGTGACCTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259299 19 - 397369 --------------------------------------------------------------------------------------TGCTAATG--CCAAGTCCCTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e mm10.chr2 181806731 308 + 182113224 I e micMur3.chr18 56878972 299 + 57149010 I e aotNan1.NW_018500483v1 2700012 151 + 11732439 I a score=32366.000000 s hg38.chr20_KI270870v1_alt 127870 4 + 183433 GTGT s panTro5.chr20 66454077 4 + 66533130 GTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129123 4 + 62195757 GTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518205 4 - 578057 GTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040242 4 - 110113093 GTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92773835 4 - 92844088 GTGT i rheMac8.chr10 C 0 I 479 s macFas5.chr10 96440089 4 + 96509753 GTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911000 4 - 16982598 GTGT i macNem1.NW_012014244v1 C 0 I 149 s cerAty1.NW_012001373v1 3714113 4 - 3785965 GTGT i cerAty1.NW_012001373v1 C 0 I 169 s chlSab2.chr2 90292466 4 - 90373283 GTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106562 4 - 179258 GTGT i manLeu1.NW_012101652v1 C 0 I 232 s colAng1.NW_012114444v1 5582593 4 - 5823884 GTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63246 4 + 372756 GTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298786 4 + 16356641 GTGC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22862056 4 + 22939663 ACAT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47621033 4 + 47698779 GTGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259318 3 - 397369 GCG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e mm10.chr2 181806731 308 + 182113224 I e micMur3.chr18 56878972 299 + 57149010 I e cebCap1.NW_016107870v1 1167967 37 + 1231380 I e aotNan1.NW_018500483v1 2700012 151 + 11732439 I a score=1826.000000 s hg38.chr20_KI270870v1_alt 127874 1 + 183433 T s panTro5.chr20 66454081 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129127 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518209 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040246 1 - 110113093 T i nomLeu3.chr13 C 0 I 14 s macFas5.chr10 96440093 1 + 96509753 C i macFas5.chr10 C 0 I 280 s chlSab2.chr2 90292470 1 - 90373283 C i chlSab2.chr2 C 0 I 16 s colAng1.NW_012114444v1 5582597 1 - 5823884 C i colAng1.NW_012114444v1 C 0 I 16 s calJac3.chrUn_GL286459 63250 1 + 372756 T i calJac3.chrUn_GL286459 C 0 I 14 s saiBol1.JH378156 16298790 1 + 16356641 T i saiBol1.JH378156 C 0 I 14 s otoGar3.GL873542 22862060 1 + 22939663 C i otoGar3.GL873542 C 0 I 15 s canFam3.chr24 47621037 1 + 47698779 C i canFam3.chr24 C 0 I 9 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e cerAty1.NW_012001373v1 3714117 169 - 3785965 I e mm10.chr2 181806731 308 + 182113224 I e micMur3.chr18 56878972 299 + 57149010 I e dasNov3.JH569290 259321 0 - 397369 C e manLeu1.NW_012101652v1 106566 232 - 179258 I e macNem1.NW_012014244v1 16911004 149 - 16982598 I e cebCap1.NW_016107870v1 1167967 37 + 1231380 I e aotNan1.NW_018500483v1 2700012 151 + 11732439 I e rheMac8.chr10 92773839 479 - 92844088 I a score=74681.000000 s hg38.chr20_KI270870v1_alt 127875 17 + 183433 AGGTTGTGTGCACACCA s panTro5.chr20 66454082 17 + 66533130 AGGTTGTGTGCACACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129128 17 + 62195757 AGGTTGTGTGCACACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518210 17 - 578057 AGGTTGTGTGCACACCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040261 17 - 110113093 AGGTTGTGCACGCACCA i nomLeu3.chr13 I 14 C 0 s rheMac8.chr10 92774318 17 - 92844088 AGGTTGTGCACACACGG i rheMac8.chr10 I 479 C 0 s macFas5.chr10 96440374 17 + 96509753 AGGTTGTGCACACACGG i macFas5.chr10 I 280 C 0 s macNem1.NW_012014244v1 16911153 17 - 16982598 AGGTTGTGCACACACGG i macNem1.NW_012014244v1 I 149 C 0 s chlSab2.chr2 90292487 17 - 90373283 AGGCTGTGCACACACGG i chlSab2.chr2 I 16 C 0 s colAng1.NW_012114444v1 5582614 17 - 5823884 AGGTTGTGCACACACGG i colAng1.NW_012114444v1 I 16 C 0 s calJac3.chrUn_GL286459 63265 17 + 372756 AGGTTGAGCCCGCCCTG i calJac3.chrUn_GL286459 I 14 C 0 s saiBol1.JH378156 16298805 17 + 16356641 AGTTTGAGCACGCGCCG i saiBol1.JH378156 I 14 I 1 s otoGar3.GL873542 22862076 17 + 22939663 GGGTGGTGTACATGATG i otoGar3.GL873542 I 15 C 0 s canFam3.chr24 47621047 14 + 47698779 GGGTCACGCTCACA--- i canFam3.chr24 I 9 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e cerAty1.NW_012001373v1 3714117 169 - 3785965 I e mm10.chr2 181806731 308 + 182113224 I e micMur3.chr18 56878972 299 + 57149010 I e dasNov3.JH569290 259321 0 - 397369 C e manLeu1.NW_012101652v1 106566 232 - 179258 I e cebCap1.NW_016107870v1 1167967 37 + 1231380 I e aotNan1.NW_018500483v1 2700012 151 + 11732439 I a score=18493.000000 s hg38.chr20_KI270870v1_alt 127892 3 + 183433 TGC s panTro5.chr20 66454099 3 + 66533130 TGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129145 3 + 62195757 TGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518227 3 - 578057 TGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040278 3 - 110113093 TGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774335 3 - 92844088 TGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440391 3 + 96509753 TGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911170 3 - 16982598 TGC i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90292504 3 - 90373283 TGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106798 3 - 179258 TGC i manLeu1.NW_012101652v1 I 232 C 0 s colAng1.NW_012114444v1 5582631 3 - 5823884 TGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63282 3 + 372756 TAC i calJac3.chrUn_GL286459 C 0 I 1 s otoGar3.GL873542 22862093 3 + 22939663 TGT i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47621061 1 + 47698779 --C i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e cerAty1.NW_012001373v1 3714117 169 - 3785965 I e mm10.chr2 181806731 308 + 182113224 I e micMur3.chr18 56878972 299 + 57149010 I e dasNov3.JH569290 259321 0 - 397369 C e saiBol1.JH378156 16298822 1 + 16356641 I e cebCap1.NW_016107870v1 1167967 37 + 1231380 I e aotNan1.NW_018500483v1 2700012 151 + 11732439 I a score=6228.000000 s hg38.chr20_KI270870v1_alt 127895 1 + 183433 G s panTro5.chr20 66454102 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129148 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518230 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040281 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774338 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440394 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911173 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714286 1 - 3785965 G i cerAty1.NW_012001373v1 I 169 C 0 s chlSab2.chr2 90292507 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106801 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582634 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s canFam3.chr24 47621062 1 + 47698779 G i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e mm10.chr2 181806731 308 + 182113224 I e micMur3.chr18 56878972 299 + 57149010 I e dasNov3.JH569290 259321 0 - 397369 C e saiBol1.JH378156 16298822 1 + 16356641 I e cebCap1.NW_016107870v1 1167967 37 + 1231380 I e calJac3.chrUn_GL286459 63285 1 + 372756 I e aotNan1.NW_018500483v1 2700012 151 + 11732439 I e otoGar3.GL873542 22862096 1 + 22939663 I a score=234655.000000 s hg38.chr20_KI270870v1_alt 127896 23 + 183433 CCCGCGTGTCTCCCTCTGAGCCT s panTro5.chr20 66454103 23 + 66533130 CCCGCGTGTCTCCCTCTGAGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129149 23 + 62195757 CCCGCGTGTCTCCCTCTGAGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518231 23 - 578057 CCCGCGTGTCTCCCTCTGAGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040282 23 - 110113093 CCCACATGTCTCCCTCTGAGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774339 23 - 92844088 CCCACATGTCTCCCTCTGAGCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440395 23 + 96509753 CCCACGTGTCTCCCTCTGAGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911174 23 - 16982598 CCCACGTGTCTCCCTCTGAGCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714287 23 - 3785965 CCCACGTGTCTCCCTCTGAGCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292508 23 - 90373283 CCCACGTGTCTCCCTCTGAGCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106802 23 - 179258 CCCACGTGTCTCCCTCTGAGCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582635 23 - 5823884 CCCACGTGTCTCCCTCTGAGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63286 23 + 372756 TCCATGCATCTCACTCTGGGCCT i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16298823 23 + 16356641 CCCATGCGTCTCGCTCTGAGCCT i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1168004 23 + 1231380 CCCGTGCGTCTCGCTCTGAGCCT i cebCap1.NW_016107870v1 I 37 C 0 s otoGar3.GL873542 22862097 23 + 22939663 CCCATACGTCTCCTGCAGGGTCT i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47621063 23 + 47698779 TTCCCGTAAGTTCCCCTGAGTCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259321 14 - 397369 ---------CCTCCGCTGAGCCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e mm10.chr2 181806731 308 + 182113224 I e micMur3.chr18 56878972 299 + 57149010 I e aotNan1.NW_018500483v1 2700012 151 + 11732439 I a score=393977.000000 s hg38.chr20_KI270870v1_alt 127919 43 + 183433 GAGGGT-GGTGCACACACATGCCCATGTGTTTCCTTCTG----ACTCC-- s panTro5.chr20 66454126 43 + 66533130 GAGGGT-GGTGCACACACATGCCCATGTGTTTCCTTCTG----ACTCC-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129172 43 + 62195757 GAGGGT-GGTGCACACACATGCCCATGTGTTTCCTTCTG----ACTCC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518254 43 - 578057 GAGGGT-GGTGCACACACATGCCCATGTGTTTCCTTCGG----ACTCC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040305 43 - 110113093 GAGGGT-GGTGCACACACACTCCCACGTGTTTCCTTCTG----ACTCC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774362 43 - 92844088 GAGGGT-GGTGCACACACATTCCCAGGTGTCTCCTTCTG----AGTCC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440418 43 + 96509753 GAGGGT-GGTGCACACACATTCCCAGGTGTCTCCTTCTG----AGTCC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911197 43 - 16982598 GAGGGT-GGTGCACACACATTCCCAGGTGTCTCCTTCTG----AGTCC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714310 43 - 3785965 GAGGGT-GGTGCACACGCATTCCCAGGTGTCTCCTTCTG----AGTCC-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292531 43 - 90373283 GAGGGT-GGTGCACACACATTCCCAGGTGTCTCCTTCTG----AGTCC-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106825 43 - 179258 GAGGGT-GGTGCACACACATTCCCAGGTGTCTCCTTCTG----AGTCC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582658 43 - 5823884 GAGGGT-GGTGCACACACATTCCCAGGTGTCTCCTTCTG----AGTCC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63309 43 + 372756 GAGGGT-GGTGTACACACATTCCTGTGCGTTTCCTTCTG----AGTCC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298846 43 + 16356641 GAGGGT-GGTGCACACACATTCCCTTGTGCTTCTGTCCG----AGTCC-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168027 43 + 1231380 GAGGGT-GGTGCGCACACATTCCTGTGTGTTTCCTTCCG----AGTCC-- i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22862120 41 + 22939663 GGTGGT---TGCACATGTGTTTTCATGTGTTTCTCATAG----AATGA-- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181807039 48 + 182113224 AAGGGTAGGTGAGCAGCCATGAAAAGAGTTTTTGTGCTGTGAAACTCA-- i mm10.chr2 I 308 C 0 s canFam3.chr24 47621086 41 + 47698779 GAGGGT-CACGCACACACGTTCCCGTAAGTTCCC--CTA----AGTCT-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259335 44 - 397369 TGTGGT-CAAGCACACG-AGTCCTGTGTATCCCCTGCTG----AGGCCCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e micMur3.chr18 56878972 299 + 57149010 I e aotNan1.NW_018500483v1 2700012 151 + 11732439 I a score=60455.000000 s hg38.chr20_KI270870v1_alt 127962 6 + 183433 AGGGCG s panTro5.chr20 66454169 6 + 66533130 AGGGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129215 6 + 62195757 AGGGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518297 6 - 578057 AGGGCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040348 6 - 110113093 AGGGCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774405 6 - 92844088 AGGGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440461 6 + 96509753 AGGGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911240 6 - 16982598 AGGGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714353 6 - 3785965 AGGGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292574 6 - 90373283 AGGGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106868 6 - 179258 AGGGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582701 6 - 5823884 AGGGCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63352 6 + 372756 AGGGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298889 6 + 16356641 AGGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168070 6 + 1231380 AGGGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700163 6 + 11732439 AGGGTG i aotNan1.NW_018500483v1 I 151 C 0 s otoGar3.GL873542 22862162 6 + 22939663 AAGGTG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181807087 6 + 182113224 AGGTCA i mm10.chr2 C 0 C 0 s canFam3.chr24 47621127 3 + 47698779 -GAG-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259379 6 - 397369 TGGTCG i dasNov3.JH569290 C 0 I 1 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e micMur3.chr18 56878972 299 + 57149010 I a score=386407.000000 s hg38.chr20_KI270870v1_alt 127968 31 + 183433 GTGCACGTGC-CCTGTTCACACGTGTTTCCCG s panTro5.chr20 66454175 31 + 66533130 GTGCACGTGC-CCTGTTCACACGTGTTTCCCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129221 31 + 62195757 GTGCACGTGC-CCTGTTCACACGTGTTTCCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518303 31 - 578057 GTGCACGTGC-CCTATTCACACGTGTTTCCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040354 31 - 110113093 GTGCACGTGC-CCTGTTCACACGTGTTTCCCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774411 31 - 92844088 GTGTACGTGC-CCTGTTCACACGTGTTTTCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440467 31 + 96509753 GTGCACGTGC-CCTGTTCACACGTGTTTTCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911246 31 - 16982598 GTGCACGTGC-CCTGTTCACACGTGTTTTCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714359 31 - 3785965 GTGCACGTGC-CCTGTTCACATGTGTTTTCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292580 31 - 90373283 GTGCATGTGC-CCTGTTCACACGTGTTTTCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106874 31 - 179258 GTGCATGTGC-CGTGTTCACATGTGTTTTCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582707 31 - 5823884 GTACACGTGC-CCTGTTCACATGTGTTTTCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63358 31 + 372756 GTACACGTGC-CCTGTTGATGTATGTTTCCCG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298895 31 + 16356641 GTGCGCGTGC-CCTGTTCACACATGTTTCCCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168076 31 + 1231380 GTGCAGGTGC-CCTGTTCACATATGTTTCCCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700169 27 + 11732439 GTGCACGCAC-CCTGTTCAC----GTTTCCCG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56879271 31 + 57149010 GTGCACGTAC-CCTGTCCACGCGTGTTTCCCG i micMur3.chr18 I 299 C 0 s otoGar3.GL873542 22862168 31 + 22939663 GTACACACAC-CCTGTTCACACGTGTTTCTTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807093 30 + 182113224 -GGCTCATAT-TGTGTTCCTATATGCTTTTCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47621130 32 + 47698779 GGTCACATACACACGTTCCCGTATGTTCCCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259386 28 - 397369 GTGCATG----TCGAACCCCACGTGTCCCCTA i dasNov3.JH569290 I 1 I 36 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I a score=193072.000000 s hg38.chr20_KI270870v1_alt 127999 18 + 183433 C--AGTCTTGTGGTTGCTGA s panTro5.chr20 66454206 18 + 66533130 C--AGTCTTGTGGTTGCTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129252 18 + 62195757 C--AGTCTTGTGGTTGCTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518334 18 - 578057 C--AGTCTTGTGGTTGCTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040385 20 - 110113093 CAGAGTCTTGTGGTTGCTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774442 20 - 92844088 CAGAGTCTTGTGGTTACTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440498 20 + 96509753 CAGAGTCTTGTGGTTACTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911277 20 - 16982598 CAGAGTCTTGTGGTTACTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714390 20 - 3785965 CAGAGTCTTGTGGTTACTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292611 20 - 90373283 CAGAGTCTTGTGGTTACTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106905 20 - 179258 CAGAGTCTTGTGGTTACTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582738 20 - 5823884 CAGAGTCTTGTGGTTACTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63389 20 + 372756 CAGAGTCTTCTGGTTGCTGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298926 20 + 16356641 CAGAGTCTTCTGGTTGCTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168107 20 + 1231380 CAGAGTCCTCTGGTTGCTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700196 20 + 11732439 CAGAGTCTTCTGGTTGCTGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56879302 18 + 57149010 C--AGTCTCATGGCTGCTGA i micMur3.chr18 C 0 I 164 s otoGar3.GL873542 22862199 14 + 22939663 T--AGTCTTG----TGCTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807123 19 + 182113224 GGAAGT-TAGTAGTGACTGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47621162 18 + 47698779 G--AGTCTGAGGGTCACACA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e dasNov3.JH569290 259414 36 - 397369 I a score=33823.000000 s hg38.chr20_KI270870v1_alt 128017 7 + 183433 CACACTC------------ s panTro5.chr20 66454224 7 + 66533130 CACACTC------------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129270 7 + 62195757 CACACTC------------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518352 7 - 578057 CACACTC------------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040405 7 - 110113093 CACACTC------------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774462 7 - 92844088 CACACTC------------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440518 7 + 96509753 CACACTC------------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911297 7 - 16982598 CACACTC------------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714410 7 - 3785965 CACACTC------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292631 7 - 90373283 CACACTC------------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106925 7 - 179258 CACACTC------------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582758 7 - 5823884 CACGCTC------------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63409 7 + 372756 CACCATC------------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298946 7 + 16356641 CTCCTTC------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168127 7 + 1231380 CTCCTTC------------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700216 7 + 11732439 CACCTTC------------ i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22862213 4 + 22939663 --CATT------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807142 4 + 182113224 CATG--------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47621180 19 + 47698779 CACACGTGTCCTTGTGTTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1873866 295 - 2029793 I e micMur3.chr18 56879320 164 + 57149010 I e dasNov3.JH569290 259414 36 - 397369 I a score=1570084.000000 s hg38.chr20_KI270870v1_alt 128024 163 + 183433 TCCTTGCTCAGAGGACCTAG----TCTTACCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGAGG---CAAGAG---GAATTGTAGGGCCCCCTTCATGGGAAATCAGGAAATGGCAGCT--GGATTTTTTCCCTCTCGCTGCCTGTCTGTCCCCGTT--GTC s panTro5.chr20 66454231 163 + 66533130 TCCTTGCTCAGAGGACCTAG----TCTTACCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGAGG---CAAGAG---GAATTGTAGGGCCCCCTTCATGGGAAATCAGGAAATGGCAGTT--GGATTTTTTCCCTTTCGCTGCCTGTCTGTCCCTGTT--GTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129277 163 + 62195757 TCCTTGCTCAGAGGACCTAG----TCTTACCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGAGG---CAAGAG---GAATTGTAGGGCCCCCTTCATGGGAAATCAGGAAATGGCAGTT--GGATTTTTTCCCTTTCGCTGCCTGTCTGTCCCTGTT--GTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518359 162 - 578057 TCCTTGCTCAGAGGACCTAG----TCTTACCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGAGG---CAAGAG---GAATTGTAGGGCCCCCTTCATGGGAAATCAGGAAATGGCAGTT--GGA-TTTTTCCCTCTCACTGCCTGTCTGTCCCTGTT--GTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040412 161 - 110113093 TCCTCGCTCAGAGGACCTAG----TCTTACCCGAGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGAGG---CAAGAG---GAATTGTAAGGCCCCCTTCATGGGAAATCAGGAAATGGCAG-T--GGA-TGTTTTCCTCTCACCGCCTGTCTTTCCCTGTT--GTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774469 163 - 92844088 TCCTTGCTCAGAGGACCTTG----TCCTACCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGGGG---CAAGAG---GAATTTCAGGGCCTCCTTCATGGGAAATCAGGAAATGGCAGTT--GGATTTTTCCGCTCTCGCTGCCTGTCTATCCGTGTT--GTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440525 163 + 96509753 TCCTTGCTCAGAGGACCTTG----TCCTACCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGGGG---CAAGAG---GAATTGCAGGGCCTCCTTCATGGGAAATCAGGAAATGGCAGTT--GGATTTTTCCGCTCTCGCTGCCTGTCTATCCGTGTT--GTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911304 163 - 16982598 TCCTTGCTCAGAGGACCTTG----TCCTACCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGGGG---CAAGAG---GAATTGCAGGGCCTCCTTCATGGGAAATCAGGAAATGGCAGTT--GGATTTTTCTGCTCTCGCTGCCTGTCTATCCGTGTT--GTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714417 163 - 3785965 TCCTTGCTCAGAGGACCTGG----TCCTACCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGGGG---CAAGAG---GAATTGCAGGGCCTCTTTCATGGGAAATCAGGAAATGGCAGTT--GGATTTTTCCGCTCTCGCTGCCTGTCTGTCCGCGTT--GTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292638 163 - 90373283 TCCTTGCTCAGAGGACTTGG----TCCTGCCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGAGG---CAAGAG---GAATTGCAGGGCCTCCTTCATGGGAAATCAGGAAATGGCAGTT--GGATTTTTCCCCTCTCGCTGCCTGTCTATCCGTGTT--GTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 106932 163 - 179258 TCCTTGCTCAGAGGACCTGG----TCCTACCCGTGTTTATGA----CATG------TCCTGAGGGACTGGTTTTTGTGCTGTTGGGGGG---CAAGAG---GAATTGCAGGGCCTCCTTCATGGGAAATCAGGAAATGGCAGTT--GGATTTTTCCGCTCTCGCTGCCTGTCTATCCGCGTT--GTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582765 163 - 5823884 TCCTTGCTCAGAGGACCTGG----TCCTACCCATGTTTATGA----CATG------TCCTGAGGGACTGGGTTTTGTGCTGTTGGAAGG---CAAGAG---GAATTGCAGGGCCTCCTTCATGGGAAATCAGGAAATGGCAGTT--AGATTTTTCCCCTCTCGCTGCCTGTCTATCCATGTT--GTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63416 159 + 372756 TCCTTGATCAGAGGACCCAG----TTTTCCCCTGGTTTATGA----CATG------TCTCAGGGGATTGGTTTTTGTGCTGTTGGGAGG---CAAGAG---GAATTGTAGGGCTTCCTTCATGGCAAATAAAGAAATGGCAGTT--GGATTTTTTT-CTCTCACTGCCTGTCTATTCTT-----GTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16298953 146 + 16356641 TCCTTGACCAGAGGACCTAG----TTTTCCCCTGGTTTATGA----CATG------TCTCAGGGTACTGGTTTTTGTGCTGTTGGGAGG---CAGGAG---GAATTGTAGGGCCTTCTTCGTGGAAAATAA---------------GGATCGTTTT-CTCTCACTGCCTGTCTGTTCTT-----GTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168134 162 + 1231380 TTCTTGATCAGAGGACCTAG----TTTTCCCCTGGTTTATGA----CACG------TCTCAGGGGACTGGTTTTTGTGCTGTTGGGAGG---CAAGAG---GAATTGTAGGGCCTCCTTTGTGGGAAATAAGGAAACGGCGGTT--GGATTTTTTT-CTCTCACTACCTGTCTGTTCTTGTC--GTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700223 105 + 11732439 CCCTTGATCAGAGGACCTAG----TTTTCCCCTGGTTTATGA----CA---------------------------------------------------------------------TTCATGGGAAATAAGGAAATGGCAGTT--GGATCTTTTT-CTCTCACTGCCTGTCTATTCTTGTC--GTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1874161 158 - 2029793 TCCTGGCTCAGAGGACCTGG----TCTTACCTGCGCTCATGA----CAGA------GCTCGAGGCACTGG-TTTCGTGCTGTTGGGAGG---CAAGAG---GAATTGTAGGGCC-CCCTCATGTGAAGTCAGGATGTGACAG-T--GGGTTTTTTTCCTCCCGGTGGCTGTCCGTGCTGGTC--A-- i proCoq1.NW_012150197v1 I 295 C 0 s otoGar3.GL873542 22862217 160 + 22939663 TTCTGGCTCAGAAGACCGGG----TCTTACCCTTGCTGATAA----GATA------TCTCAGGGGTCTAG-TTTCGTGCTGTTTGGGAG---CAAGAG---GAATTGTAGGGCCTCTTTCATGGGAAATCAGGATGTGACAGTT--GGGTTTCTTTCCTCCTAGTGTTTTCCTGTGCTGGTT--A-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807146 149 + 182113224 TCTTAGGGTCAAAGACCTGT----TTTCAC-------TAAAG----CATGCAGTGATCTCAAGGGTCTGG-CTTCCTAATGTGTAGGAG---AAAGGGGCTGGGCTGCAGGGCTTC-TTTACATGAGGTTAGGATATGGCGCT-----AATTCTTTCCTCTAAGCAGGCATTGA------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47621199 175 + 47698779 CCCTGAGTCTGTGGGTCGAGCACATGTCCCGTGTGATCACGGTCACTGCC------TCTCAAGGGTCTGC-TTTTGTGAGGTTGGCAAGACCCGCGAG---AGGGTGGAGGTTCCTCCTCATG-AATTTCGGGAAGTGGCAAGTCCAGATCCTTGC-TTCTCAGAGCTCTCCTCTTCTTGTTTGGCT i canFam3.chr24 C 0 C 0 e micMur3.chr18 56879320 164 + 57149010 I e dasNov3.JH569290 259414 36 - 397369 I a score=571105.000000 s hg38.chr20_KI270870v1_alt 128187 50 + 183433 CTGCTTCCTTCTATGGGAACCAGTGTTCTGGACTCTGTACGTTTGAT----------------------------------------------------------------------------------TCA s panTro5.chr20 66454394 50 + 66533130 CTGCTTCCTTCTATGGGAACCAGTGTTCTGGACTCTGTACGTTTGAT----------------------------------------------------------------------------------TCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129440 50 + 62195757 CTGCTTCCTTCTATGGGAACCAGTGTTCTGGACTCTGTACGTTTGAT----------------------------------------------------------------------------------TCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518521 50 - 578057 CTGCTTCCTTCTATGGGAACCAGTGTTCTGGACTCTGTACGTTTGAT----------------------------------------------------------------------------------TCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040573 50 - 110113093 CTGCTTCCTTCTATGGGAACCAGTGTTCTGGACCCTGTACGTGTGAT----------------------------------------------------------------------------------TCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774632 50 - 92844088 CTGCTTCCTTCTATGGGAACCAGTGTTCCGGACTCTGTACCTTTGAT----------------------------------------------------------------------------------TAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440688 50 + 96509753 CTGCTTCCTTCTATGGGAACCAGTGTTCCGGACTCTGTACCTTTGAT----------------------------------------------------------------------------------TAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911467 50 - 16982598 CTGCTTCCTTCTATGGGAACCAGTGTTCCGGACTCTGTACCTTTGAT----------------------------------------------------------------------------------TAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714580 50 - 3785965 CTGCTTCCTTCTATGGGAACCAGTGTGCCGGACTCTGTACATTTGAT----------------------------------------------------------------------------------TAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292801 50 - 90373283 CTGCTTCCTTCTATGGGAACCAGTGTTCCGGACCCTGTACATTTGAT----------------------------------------------------------------------------------TAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107095 50 - 179258 CTGCTTCCTTCTATGGGAACCAGTGTTCTGGACTCTGTACGTTTGAT----------------------------------------------------------------------------------TAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582928 50 - 5823884 CTGCTTCCTTCTATGGGAACCAGTGTTTCCGACTCTGTACATTTGAT----------------------------------------------------------------------------------TAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63575 132 + 372756 CTGTTTCCTTATATGGGAATCAGTGTTCTGGACTCTGTGTATTTGATTAAAATGTATGGAAAGCACGCACGGAACGGAGCTGGAATCCTAACAGATTTCACCTTTGGCATTTANNNNNNNNNNATTTGATTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299099 50 + 16356641 CTGTTTTCTTACATGGGAATCAGTGTTCTGGACTCTGTGTGTTTGAT----------------------------------------------------------------------------------TCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168296 48 + 1231380 CTGTTTCCTTACATGGGAATCCGTGTTCTGGACTC--TGTATTTGAT----------------------------------------------------------------------------------TGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700328 50 + 11732439 GTGTTTCCTTATATGGGAATCGGCGTTCTGGACTCTGTGTATCTGAT----------------------------------------------------------------------------------TAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56879484 50 + 57149010 CTGTTTCCTTCCATGGGAATTGGTGTTCTAGACTCTGTAAATTTGAT----------------------------------------------------------------------------------TAA i micMur3.chr18 I 164 C 0 s proCoq1.NW_012150197v1 1874319 50 - 2029793 CTGTTTCCTTCCACGGGAACTGGTGTTCTAGGCTCTGTAAATTTGAT----------------------------------------------------------------------------------TAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22862377 44 + 22939663 -----CTCTTCCATAGGAATTGGAGTTTTGGACTCTGTAAATTTG-T----------------------------------------------------------------------------------TAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807295 32 + 182113224 TTGCTTCTTTCTACAAGAGTCAGTAT---------------TGTGAC------------------------------------------------------------------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47621374 50 + 47698779 CTGCTTCCTTCCAAGGGAGACCGTTTCGGGCCTTCTGTAATGCTGAT----------------------------------------------------------------------------------TTA i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 259414 36 - 397369 I a score=6329461.000000 s hg38.chr20_KI270870v1_alt 128237 344 + 183433 AATGGACCAGAAGGCACACATGGGAAGGGA-TGGAATCGCTAAC---A--GATCTCACCTTTGCCATTGCAGTCTGTGGATATCGAGGTAGACGAAAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAACGAGAAA------ATGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGTGTGAAGTCTCCCGACGCCTCccagcgccacagcagcaccagcgcccccagcagctccaTGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAACCTGAGGAGGTGGGTGC s panTro5.chr20 66454444 345 + 66533130 AATGGACCAGAAGGCACACACAGGAAGGGGCTGGAATCGCTAAC---A--GATTTCACCTTTGCCGTTGCAGTCTGTGGATATCGAGGTAGACGAAAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAACGAGAAA------ATGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGTGTGAAGTCTCCCGACGCCTCCCAGCGCCACAGCAGCACCAGTGCCCCCAGCAGCTCCATGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAACCTGAGGAGGTGGGTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129490 345 + 62195757 AATGGACCAGAAGGCACACACAGGAAGGGGCTGGAATCGCTAAC---A--GATTTCACCTTTGCCGTTGCAGTCTGTGGATATCGAGGTAGACGAAAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAACGAGAAA------ATGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGTGTGAAGTCTCCCGACGCCTCCCAGCGCCACAGCAGCACCAGTGCCCCCAGCAGCTCCATGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAACCTGAGGAGGTGGGTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518571 345 - 578057 AATGGACCAGAAGGCACACACGGGAAGGGGCTGGAATCGCTAAC---A--GATTTCACCTTTGCAATTGCAGTCTGTGGATATTGAGGTAGACGAAAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAACGAGAAA------ATGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGTGTGAAGTCTCCCGACGCCTCCCAGCGCCACAGCAGCACCAGCGCCCCCAGCAGCACCATGACCTCTCCCCAGTCCAGCCAGGCCTCACGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAACCTGAGGAGGTGGGTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040623 345 - 110113093 AATGGACCAGAAGGCACACACGGGAAGGGGCTGGAATCGCTAAC---A--GATCTCACCTTTGCAATTGCAGTCTGTGGATATTGAGGTAGATGAGAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAACGAGAAA------ATGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGTGTGAAGTCTCCGGACGCCTCCCAGCGCCAGAGCGGCACCAGCGCCCCCAGCAGCTCCATGACCTCCCCCCAGTCCAGCCAGGCCTCCCGCCCGGACGAGTGGGACCAGCCCCTGGACTACACCAAGCCAAGCCGCCCGAGAGAGGAGGAACCTGAGGAGGTGGGTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92774682 345 - 92844088 AATGTACCAGAAGGCACACACGGGAAGGGGCTGCAATCGCTAAC---A--GATTTCCCCTTTGCAATTGCAGTCTGTGGATATTGAGGTAGATGAGAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAGCGAGAAC------AGGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGCGTGAAGTCTCCTGACACCTCccagcgccagagcagcaccagcgcccccagcagctccaTGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAGCCTGAGGAGGTGGGTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96440738 345 + 96509753 AATGTACCAGAAGGCACACACGGGAAGGGGCTGCAATCGCTAAC---A--GATTTCCCCTTTGCAATTGCAGTCTGTGGATATTGAGGTAGATGAGAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAGCGAGAAC------AGGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGCGTGAAGTCTCCTGACACCTCCCAGCGCCAGAGCAGCACCAGCGCCCCCAGCAGCTCCATGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAGCCTGAGGAGGTGGGTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911517 345 - 16982598 AATGTACCAGAAGGCACACACGGGAAGGGGTTGCAATCGCTAAC---A--GATTTCCCCTTTGCAATTGCAGTCTGTGGATATTGAGGTAGATGAGAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAGCGAGAAC------AGGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGCGTGAAGTCTCCTGACACCTCccagcgccagagcagcaccagcgcccccagcagctccaTGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAGCCTGAGGAGGTGGGTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714630 345 - 3785965 AATGTACCAGAAGGCACACACGGGAAGGGGCTGCAATCGCTAAC---A--GATTTCCCCTTTGCAATTGCAGTCTGTGGATATTGAGGTAGATGAGAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAGCGAGAAC------AGGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGCGTGAAGTCTCCTGACACCTCccagcgccagagcagcaccagcgcccccagcagctccaTGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAGCCTGAGGAGGTGGGTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90292851 345 - 90373283 AATGTACCAGAAGGCACACACGGGAAGGGGCTGGAATCGCTAAC---A--GATTTCACCTTTGCAATTGCAGTCTGTGGATATTGAGGTAGATGAAAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAGCGAGAAC------AGGTTTTC------CCcagcagcagcagctgcagcagcagcCCCGGTGTGAAGTCTCCTGACACCTCccagcgccagagcagcaccagcgcccccagcagctccaTGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAGCCTGAGGAGGTGGGTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107145 345 - 179258 AATGTACCAGAAGGCACACACGGGAAGGGGCTGCAATCGCTAAC---A--GATTTCCCCTTTGCAATTGCAGTCTGTGGATATTGAGGTAGATGAGAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAGCGAGAAC------AGGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGCGTGAAGTCTCCTGACACCTCccagcgccagagcagcaccagcgcccccagcagctccaTGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAGCCTGAGGAGGTGGGTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5582978 345 - 5823884 AATGTACCAGAAGGCACACACGGGAAGGGGCTGGAATCACTAAC---A--GATTTCACCTTTGCAATTACAGTCTGTGGATATTGAGGTAGATGAAAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAGCGAGAAC------AGGCTTTC------CCcagcagcagcagctgcagcagcagcCCCGGCGTGAAGTCTCCTGACACCTCccagcgccagagcagcaccagcgcccccagcagctccaTGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAACCTGAGGAGGTGGGTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 63707 344 + 372756 AATGTA-TGGAAAGCACGCACGGAACGGGGCTGGAATCTATATT---A--GATTTCACCTTTGCAATTACAGTCTGTGGATATTGAGGTAGATGAAAATGGAACCCTGGACTTGAGTATGCACAAACACCGCAGACGAGAAA------ACGCTTTC------CCcagcagcagcagctgcagcagcagcCCTGGCGTCAAGTCTCCCGACCCCTCTCAGCGCCAGAGCAGCACCAGCGCCCCCAACAGCTCCATGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCCAGCCGCCTGAGAGAGGAGGAGCCTGAGGAGGTGGGTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299149 344 + 16356641 AATGTA-CGGAAGGCACACACGGGAAGGGGCTGGAATGGCTAAC---A--GATTTCACCTTTGCAATTACAGTCTGTGGATATTGAGGTGGATGAAAACGGAACCCTGGACTTAAGCATGCACAAACACCGCAAGCGAGAAA------ACACTTTC------CCcagcagcagcagctgcagcagcagcCCTGGTGTGAAGTCTCCCGACGCCTCTCAGCGCCAGAGCAGCTCCAGCGCCCCCAGCAGCTCCATGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAGCCTGAGGAGGTGGGTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168344 344 + 1231380 AATGTA-CGGAAGGCACACACGGGAAGGGGCTGGAATCGCTAAC---A--GATTTCACCTTTGCAATTACAGTCTGTGGATATTGAGGTAGATGAAAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAACGAGAAA------ATGCTTTC------CCcagcagcagcagctgcagcagcagcCCTGGCGTGAAGTCTCCCGACGCCTCTCAGCGCCAGAGCAGCACCAGCGCCCCCAGCAGCTCCATGACCTCTCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCTAGCCGCCTGAGAGAGGAGGAGCCTGAGGAGGTGGGTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700378 344 + 11732439 AATGTA-CGGAAGGCACACACGGGAAGGGGCCGGAATCGCTAAC---A--GGCTTCACCTTTGCAATTACAGTCTGTGGATATTGAGGTAGATGAAAATGGAACCCTGGACTTGAGCATGCACAAACACCGCAAACGAGAAA------GCGCTTTT------CCcagcagcagcagctgcagcagcagccccagcGTGAAGTCTCCCGACGCTTCTCAGCGCCAGAGCAGCACCAGCGCCCCCAGCAGCTCCATGACCTCCCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCCAGCCGCCCAAGGGAGGAGGAGCCTGAGGAGGTGGGTGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56879534 344 + 57149010 AATGCACCAGACGGCGTGCATGGG-AGGGGCTGGAGTCCCTAAC---A--GATCTCACCTTTCCGACTGCAGTCTGTGGACATCGAGGTAGATGAAAACGGAACGCTGGACTTGAGCATGCATAAACACCGCAAGCGGGAAA------GCACCTTC------CCcagcagcagcagctgcagcagcagcCCCGGCGTGAAGTCTCCTGATGCCACCCAGCGCCAGAGCAGCACCAGTGCCCCCAGCAGCTCCATGACCTCGCCCCAGTCCAGCCAGGCCTCCCGCCAGGACGAGTGGGACCGGCCCCTGGACTACACCAAGCCCAGCCGCCTGAGAGAGGAGGAGCCGGAGGAGGTGGGTGC i micMur3.chr18 C 0 I 511 s proCoq1.NW_012150197v1 1874369 345 - 2029793 AATGCACCAGAAGGCATGTCTGGGAAGGGGCTGGGATCTCTAAC---A--GATCTCACCTTCCCGACTGCAGTCTGTGGACATCGAGGTGGATGAAAATGGAACCCTGGACCTGAGCATGCGCAAGCACCGCAAACGGGAGA------ACGCTCTC------CCcagcagcagcagctgcagcagcagcCCCGGCGTGAAGTCTCCCGATGCCGCCCAGCGCCAGAGCAGCACCAGCGCCCCTAGCAGCTCCATGACCTCACCCCAGTCCAGCCAGGCCTCCCGCCAGGATGAGTGGGACCGGCCCCTGGACTACACCAAGCCCAGCCGCCTGCGCGAGGAGGAGCCGGAGGAGGTGGGTGC i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22862421 349 + 22939663 AATGTACAAGAAGACATACATGGGAAGGGGCTGGAATCCGTGAT---A--GATTTCATCTTTGCAATTGCAGTCTGTGGACATTGAAGTGGATGAGAACGGAACCCTGGACCTGAGCATGCACAAGCACCGCAGGCGGGAGG------GCACTGGCCCTGGTCCTGGCAGTGGGAGCAGCAGTGGCAGCCCTGGAGTGAAGTCTCCTGAGGCTTCCCAGCGCCAGAGCAGCACCAACGCCCCTAGCAGCTCCATAACTTCACCCCAGTCCAGCCAGGCCTCGCGTCAGGATGAGTGGGATCGACCCCTGGACTACACCAAGCCCAGCCGCCTGCGAGAGGAGGAGCCGGAGGAGGTGGGT-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807327 341 + 182113224 -------CAGAAAACACTTTCAGGAAGTGGCTCAGTTTGCTAACCCTA--TTCTTAACCTTCATATTTGTAGGCTGTGGACATTGAGGTAGATGAAAATGGAACTCTGGACTTGAGCATGCATAAACATCGCAAGCGGGAAA------ACACTTTC------CCCAGCAGTAGCAGCTGCAGTAGCAGCCCTGGTGTCAAGTCTCCTGATGTCTCTCAACGTCAGAGCAGTACCAGTGCCCCCAGCAGCTCTATGACCTCACCCCAGTCCAGCCAGGCCTCTCGCCAGGATGAGTGGGACCGTCCTCTAGACTACACCAAACCTAGTCGGCTTCGAGAGGAAGAGCCTGAGGAGGTGGGTGC i mm10.chr2 C 0 I 1 s canFam3.chr24 47621424 341 + 47698779 ---GTACCGGAAGGCACACGTG---AAGGGGTGAAATCACTCGC---ATGGATTTCACCCTCACAATTGCAGGCTGCGGACATAGAGGTGGATGAAAACGGAACCCTGGACTTGAGCATGCATAAACACCGCAAACGAGAAA------GCGCTTTC------CCcagcagcagcagcagcagcagcagcCCTGGCGTCAAGTCGCCCGAGGCCTCCCAGCGCCAGAGCAGCACCAGCGCCCCCAGCAGCTCCATGACCTCGCCCCAGTCCAGCCAGGCTTCCCGCCAGGATGAGTGGGATCGACCTCTGGACTATACCAAGCCCAGTCGCCAACGTGAAGAGGAACCCGAGGAGGTGGGTGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259450 329 - 397369 AACGTactggaaggcacatatg---------------------c---c--gatttcatcttttc-attgcagtctgtggacatcgaggtggacgagaacggaACCCTGGACTTGAGCATGCACAAACACCGCAAGCGCGACAGCAGCGGCGCGCTC------CCCAGCAACAGCAGCTGCAGCAGCAGCCCCAGCCTCAAGTCGCCCGAGGGCCCCCAACGCCTGGCCAGCACCAGTGCCACCAGCAGCTCCCTTACCTCCCCCCAGTCCAGCCAGGCCTCCCGCCAGGATGAGTGGGACGGCCCCTTGGACTACACCAAGCCCAGCCGCCAGCGCGAGGAGGAGCCCGAGGAGGTGGGTGC i dasNov3.JH569290 I 36 C 0 a score=19822.000000 s hg38.chr20_KI270870v1_alt 128581 4 + 183433 A-GGC s panTro5.chr20 66454789 4 + 66533130 A-GGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129835 4 + 62195757 A-GGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518916 4 - 578057 A-GGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040968 4 - 110113093 A-GGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775027 4 - 92844088 A-GGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441083 4 + 96509753 A-GGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911862 4 - 16982598 A-GGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714975 4 - 3785965 A-GGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293196 4 - 90373283 A-GGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107490 4 - 179258 A-GGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583323 4 - 5823884 A-GGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64051 5 + 372756 AGGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299493 5 + 16356641 AGGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168688 5 + 1231380 AGGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700722 5 + 11732439 AGGGC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1874715 4 - 2029793 -GGGG i proCoq1.NW_012150197v1 I 1 C 0 s mm10.chr2 181807669 4 + 182113224 A-GGG i mm10.chr2 I 1 C 0 s dasNov3.JH569290 259779 4 - 397369 -TGGC i dasNov3.JH569290 C 0 I 181 e canFam3.chr24 47621765 0 + 47698779 C e micMur3.chr18 56879878 511 + 57149010 I e otoGar3.GL873542 22862770 0 + 22939663 C a score=84554.000000 s hg38.chr20_KI270870v1_alt 128585 17 + 183433 GCC-----TGGGCAAGCAGTCA s panTro5.chr20 66454793 17 + 66533130 GCC-----TGGGCAAGCAGTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129839 17 + 62195757 GCC-----TGGGCAAGCAGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518920 17 - 578057 GCC-----TGGGCAAGCAGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040972 17 - 110113093 GCC-----TGGGCAAGCGGTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775031 13 - 92844088 GCC-----TGG----GCAGTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441087 13 + 96509753 GCC-----TGG----GCAGTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911866 13 - 16982598 GCC-----TGG----GCAGTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714979 13 - 3785965 GCC-----TGG----GCAGTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293200 13 - 90373283 GCC-----TGG----GCAGTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107494 13 - 179258 GCC-----TGG----GCAGTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583327 17 - 5823884 GCC-----TGGGCAAGCAGTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64056 17 + 372756 GCC-----CGGGCGAGCAGTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299498 17 + 16356641 GCC-----CGGGCCGGCAGTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168693 17 + 1231380 GCC-----TGGGCGAGCAGTCA i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1874719 16 - 2029793 GCC-----TGAGAG-AGCTTCG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22862770 16 + 22939663 ACC-----TGGAGG-GCTGTCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807673 22 + 182113224 GCCCTATATGTGACCTTAGTGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47621765 7 + 47698779 ---------------GGGGCCG i canFam3.chr24 C 0 C 0 e micMur3.chr18 56879878 511 + 57149010 I e dasNov3.JH569290 259783 181 - 397369 I e aotNan1.NW_018500483v1 2700727 0 + 11732439 C a score=235481.000000 s hg38.chr20_KI270870v1_alt 128602 31 + 183433 GGCGGCTGCAGCCAGCTTGCCCTGCCTGAGG s panTro5.chr20 66454810 31 + 66533130 GGCGGCTGCAGCCAGCTTGCCCTGCCTGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129856 31 + 62195757 GGCGGCTGCAGCCAGCTTGCCCTGCCTGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518937 31 - 578057 GGCGGCTGCAGCCAGCTTGCCCTGCCTGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110040989 31 - 110113093 GGCGGCTGCAGCCGGCTCGCCCTGCTTGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775044 24 - 92844088 GGAGGCT-------GCTTGCCCCGCCTGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441100 24 + 96509753 GGAGGCT-------GCTTGCCCCGCCTGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911879 24 - 16982598 GGAGGCT-------GCTTGCCCCGCCTGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3714992 24 - 3785965 GGAGGCT-------GCTTGCCCTGCCTGAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293213 24 - 90373283 GGAGGCT-------GCTTGCCCTGCCTGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107507 24 - 179258 GGAGGCT-------GCTTGCCCTGCCTGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583344 24 - 5823884 GGAGGCT-------GCTTGCCCTGCCTGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64073 31 + 372756 GGCGGCTGCAGCCAGCTTGCCCTGCCTGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299515 31 + 16356641 GGTGGCTGCAGCCAGCTTGCCCTGCCTGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168710 31 + 1231380 GGCGGCTGCAGCCAGCTCGCCCTGCCTGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700727 17 + 11732439 --------------GCTCGCCCTGCCTGAGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1874735 31 - 2029793 GGCGGCTGCAGCCAGCTTGCCCTGCCTGAGG i proCoq1.NW_012150197v1 C 0 I 31 s otoGar3.GL873542 22862786 13 + 22939663 CATGGACACAGCC------------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807695 23 + 182113224 GTAGGCT--------CTCAGCTGCTTTCAGG i mm10.chr2 C 0 I 1 s canFam3.chr24 47621772 4 + 47698779 GGGG--------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259964 31 - 397369 GGAGGTGGCGGGTGGCCTGCCGTGCCTGAGG i dasNov3.JH569290 I 181 C 0 e micMur3.chr18 56879878 511 + 57149010 I a score=210844.000000 s hg38.chr20_KI270870v1_alt 128633 26 + 183433 CTGTTGTGA----TATTGGCTTTTCAAGGA s panTro5.chr20 66454841 26 + 66533130 CTGTTGTGA----TATTGGCTTTTCAAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129887 26 + 62195757 CTGTTGTGA----TATTGGCTTTTCAAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518968 26 - 578057 CTGTTGTGA----TATTGGCTTTTCAAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041020 26 - 110113093 CTGTTGTGA----TCCTGGCTTTTCAAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775068 26 - 92844088 TTGTTGTAA----TGTTGGCTTTTCAAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441124 26 + 96509753 TTGTTGTAA----TGTTGGCTTTTCAAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16911903 26 - 16982598 TTGTTGTAA----TGTTGGCTTTTCAAAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715016 26 - 3785965 TTGTAGTAA----TGTTGGCTTTTCAAGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293237 26 - 90373283 TTGTTGTAA----TGTTGGCTTTTCAAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107531 26 - 179258 TGGTTGTAA----TGTTGGCTTTTCAAGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583368 26 - 5823884 TTGTTGTAA----TGTTGGCTTTTCAAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64104 26 + 372756 CTATTGTAC----CATTGGCTTCTCAAGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299546 26 + 16356641 CTGTTGTAA----CATTGGCATCTCAAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168741 26 + 1231380 CTATTGTAA----CATTGGCTTCTCAAGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700744 26 + 11732439 CTATTGTAA----CATTGGCTTCTCGAGGC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181807719 30 + 182113224 CTGCTGTGAACACTGCTTGCTTCTTAGATA i mm10.chr2 I 1 C 0 s canFam3.chr24 47621776 11 + 47698779 CTGCTGTAG----AA--------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 259995 16 - 397369 --------------CCTGGCTAATGGTGGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1874766 31 - 2029793 I e micMur3.chr18 56879878 511 + 57149010 I e otoGar3.GL873542 22862799 0 + 22939663 C a score=277509.000000 s hg38.chr20_KI270870v1_alt 128659 32 + 183433 AGCTTCTCCT---CACAGG-----CTTCTGGAAGAGCCTC s panTro5.chr20 66454867 32 + 66533130 AGCTTCTCCT---CACAGG-----CTTCTGGAAGAGCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129913 32 + 62195757 AGCTTCTCCT---CACAGG-----CTTCTGGAAGAGCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 518994 32 - 578057 AGCTTCTCCT---CACAGG-----CTTCTGGAAGAGCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041046 32 - 110113093 AATTCCTCCT---CACAGG-----CTTCTGGAAGGGCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775094 31 - 92844088 AGCTCCTCCT---CACAGG------TTCTGGCAGAGCCTC i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96441150 31 + 96509753 AGCTCCTCTT---CACAGG------TTCTGGCAGAGCCTC i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16911929 31 - 16982598 AGCTCCTCCT---CACAGG------TTCTGGCAGAGCCTC i macNem1.NW_012014244v1 C 0 I 2 s cerAty1.NW_012001373v1 3715042 31 - 3785965 AGCTCCTCCT---CACAGG------TTCTGGCAGAGCCTC i cerAty1.NW_012001373v1 C 0 I 2 s chlSab2.chr2 90293263 31 - 90373283 AGCTCCTCCT---CACAGG------TTCTGGCCGAGCCTC i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 107557 31 - 179258 AGCTCCTCCT---CACAGG------TTCTGGCAGAGCCTC i manLeu1.NW_012101652v1 C 0 I 2 s colAng1.NW_012114444v1 5583394 31 - 5823884 AGCTCCTCCT---CACAGG------TTCTAGCAGAGCCTC i colAng1.NW_012114444v1 C 0 I 2 s calJac3.chrUn_GL286459 64130 32 + 372756 AGCTCCTCCT---CTCAGG-----CTTCCTGCAGAGCCTC i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16299572 32 + 16356641 AGCTCCTCCT---CACAGG-----CTTCCTGCAGAGGCTC i saiBol1.JH378156 C 0 I 2 s cebCap1.NW_016107870v1 1168767 32 + 1231380 AGCTCCTCCT---CACAGG-----CTCCCTGCGGAGGCTC i cebCap1.NW_016107870v1 C 0 I 2 s aotNan1.NW_018500483v1 2700770 30 + 11732439 AGCTCCTCCT-----CAGA-----CTTCCTGCAGAGCCCC i aotNan1.NW_018500483v1 C 0 I 2 s proCoq1.NW_012150197v1 1874797 32 - 2029793 AGCTCCTCCT---CACAGG-----CTTCTGGCAGAGCCTC i proCoq1.NW_012150197v1 I 31 I 109 s otoGar3.GL873542 22862799 4 + 22939663 --------------------------TCTG---------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807749 36 + 182113224 -TCTTTTCCT---TAAGAGGTTTATGTCTACATAAACCTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47621787 27 + 47698779 ----AGTACT---CGCGTC------TCCAGGAAGAACTTC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 260011 33 - 397369 --ATCCTCCTTGCCATGAG-----CTTCCGACAGAGCCTC i dasNov3.JH569290 C 0 I 2 e micMur3.chr18 56879878 511 + 57149010 I a score=1280000.000000 s hg38.chr20_KI270870v1_alt 128691 128 + 183433 -GGGGAGCCATCCCTTTTCGTG--AAGGGTCCTTCATCTTCTGAGCAGCTGGGACTCAGGGGCTCACCCTCTGGGTGGGATTTTCAGCAGCAGGGTCATGCTGTGCCCTTG-TCT--G-TCAAGAAGGAGGTGGT s panTro5.chr20 66454899 128 + 66533130 -GCGGAGCCATCCCTTTTCGTG--AAGGGTCCTTCATCTTCTGAGCAGCTGGGACTCAGGGGCTCACCCTCTGGGTGGGATTTTCAGCAGCAGGGTCATGCTGTGCCCTTG-TCT--G-TCAAGAAGCAGGTGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62129945 128 + 62195757 -GGGGAGCCATCCCTTTTCGTG--AAGGGTCCTTCATCTTCTGAGCAGCTGGGACTCAGGGGCTCACCCTCTGGGTGGGATTTTCAGCAGCAGGGTCATGCTGTGCCCTTG-TCT--G-TCAAGAAGCAGGTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519026 128 - 578057 -GGGGAGCCATCCCTTTTTGTG--AAGGGTCCTTCATCTTCTGAGCAGCTGGGACTCAGGGGCTCACCCTCTGGGTGGGATTTTCAGCAGCAGGGCCATGCTGTGCCCTTG-TCT--G-TCAAGAAGGAGATGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041078 113 - 110113093 -GGGGAGCCGTCCATTTTC-CG--AAGAGCCCTTCGTCTTCTCAGCGGCTGGGACTCA--------------GGGTGGGATTTTCAGCAGCAGGGGCATGCTGTGCCCTTG-TCT--G-TCAAGAAGGAGGTGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775127 128 - 92844088 -GGGGAGACATCCCATTTCGTG--AAGGGTCCTTCATCTTCTGAGCGGCTGGGACTCAGGGGCCCACCCTCTGGGTGGGATTTTCAGCAGCAGGGCCATGCTGTGCCCTTG-TCT--G-TCAAGAAGGAGGTGGT i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96441183 128 + 96509753 -GGGGAGACATCCCATTTCGTG--AAGGGTCCTTCATCTTCTGAGCGGCTGGGACTCAGGGGCCCACCCTCTGGGTGGGATTTTCAGCAGCAGGGCCATGCTGTGCCCTTG-TCT--G-TCAAGAAGGAGGTGGT i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16911962 128 - 16982598 -GGGGAGACATCCCATTTCGTG--AAGGGTCCTTCATCTTCTGAGCGGCTGGGACTCAGGGGCCCACCCTCTGGGTGGGATTTTCAGCAGCAGGGCCATGCCGTGCCCTTG-TCT--G-TCAAGAAGGAGGTGGT i macNem1.NW_012014244v1 I 2 C 0 s cerAty1.NW_012001373v1 3715075 128 - 3785965 -GGGGAGATATCCCTTTTCGTG--AAGGGTCCTTCATCTTCTGAGCGGCTGGGACTCAGGGGCTCACCCTCTGGGTGGGATTTTCAGCAGCAGGGCCATGCTGTGCCCTTG-TCT--G-TCAAGAAGGTGGTGGT i cerAty1.NW_012001373v1 I 2 C 0 s chlSab2.chr2 90293295 127 - 90373283 -GGGGAGACA-CCCTTTTCGTG--AAGGGTCCTTCATCTTCTGAGCGGCTGGGACTCGGGGGCCCACCCTCTGGGTGGGATTTTCAGCAGCAGGGCCATGCTGTGCCCTTG-TCT--G-TCAAGAAGGAGGTGGT i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 107590 128 - 179258 -GGGGAGACATCCCTTTTCGTG--AAGGGTCCTTCATCTTCTGAGCGGCTGGGACTCAGGGGCTCACCCTCTGGGTGGGATTTTCAGCAGCAGGGCCATGCTGTGCCCTTG-TCT--G-TCAAGAAGGAGGTGGT i manLeu1.NW_012101652v1 I 2 C 0 s colAng1.NW_012114444v1 5583427 125 - 5823884 -GGGGAGACATCCCTTTTCGTG--AAGGGGCCTTCATCTTCTGAGCGGCTGGGACTCAGGGGCCCACCCTCTGGGTGGGATTTTCAGCAGCAGGGCCAACCCTT---CTTG-TCT--G-TCAAGAAGGAGGTGGT i colAng1.NW_012114444v1 I 2 C 0 s calJac3.chrUn_GL286459 64164 127 + 372756 -GGGGAGCCATCACTTTCTATG--AAGAGCCCTTCATCTTCTGAGCAGCTGGGACTCAGGGGCCCATCCTCTGGGTGGCATCTTC-GCAGCAGGGCCATGCTGTCGCCTTG-TCT--G-TAGAGAAGGAGGTGGT i calJac3.chrUn_GL286459 I 2 C 0 s saiBol1.JH378156 16299606 127 + 16356641 -GGGGAGCCATCACTTTCTATG--AAGAGCCCTTCATCTTCTGAGCAGCTGGGACTCAGGGGCCCACCCTCTGGGTGGGATCTTC-GCAGCAGGGCCAAGCTGTCGGCTTG-TCT--G-TAGAGCAGGAGGTGGT i saiBol1.JH378156 I 2 C 0 s cebCap1.NW_016107870v1 1168801 127 + 1231380 -GGGGAGCCATCACTTTCTATG--AAAAGCCCTTCATTTTCTGAGCAGCTGGGACTCAGGGGCCCACCCTCTGGGTGGGATCTTC-GCAGCAGGGCCATGCTGTCGGCTTG-TCT--G-TAGAGAAGGAGGTGGT i cebCap1.NW_016107870v1 I 2 C 0 s aotNan1.NW_018500483v1 2700802 124 + 11732439 -GGGGAGCCGTCACTTTCTATG--AAGAGCCCTTCATCTTCTGAGCAGCTGGGACTC--GGGCCCACCCTCTGGGTGGGATCTTC-GCAGCAGGGCTGTGC-GTCGCCTTG-TCT--G-TAGAGAAGGAGGTGAT i aotNan1.NW_018500483v1 I 2 C 0 s otoGar3.GL873542 22862803 117 + 22939663 -AGGGCCCCACTCTTTTCCACA------------CAACTCCCAGGCAGTTGGGACTTGGAGTCCTGCCCTCCGGGAAGGTTCCT--ACTGTAGGGCTGTGCTATAGCCTTGTTCC--T-TCAAGAAGGAGGTGGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807785 124 + 182113224 -CAAGGTCTATCTCTTTTCATA--CAGGATTCTTCATCTTCAGGCCATTCAAAACTCAGGTCACAGCCTGCAGCAAAGGTTTCTC--CTGCGTTGTTACACTCAGTCTTGT-TCC--A-TAAAGA--GAGTGGGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47621815 126 + 47698779 -GGGGTCCTGTCCCTAGCCACA--CGGGGCCTCGCCGCCGCTAGGAAGCTAGGACCC---GGCCTGCCCTCTTGG-AGGATCTCCCACCTCTGGGCCATGCTGTGGTCTTG-TCCCAA-CCGGGAGAGAGGTGGT i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 260046 114 - 397369 GTGGGTCCTGCCCGTGTCCATATTCAGAACACTTTCCTTCCC------------CCCACCCGCCCACCTGC------GAGTTTTCAGCCTGGGGGCTGTGCTGCACCTTGC-TCT--GTTCAAGGGAAAGATGGT i dasNov3.JH569290 I 2 C 0 e proCoq1.NW_012150197v1 1874829 109 - 2029793 I e micMur3.chr18 56879878 511 + 57149010 I a score=661730.000000 s hg38.chr20_KI270870v1_alt 128819 55 + 183433 CTTCTCA-CCCCTGTGGA-GCATGGTGGCCAGCACCAACGTGGGCACTGTGGAGGCA s panTro5.chr20 66455027 55 + 66533130 CTTCTCA-CCCCTGTGGA-GCATGGTGGCCAGTACCAACGTGGGCACTGTGGAGGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130073 55 + 62195757 CTTCTCA-CCCCTGTGGA-GCATGGTGGCCAGTACCAACGTGGGCACTGTGGAGGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519154 55 - 578057 CTTCTCA-CCCCTGTGGA-GCATGGTGGCCAGTACCGACGTGGGCACTGTGGAGGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041191 54 - 110113093 CTTGTCA--CCCTGTGGA-GCGTGGCGGCCAGTACCAACGTGGGCACTGTGGAGGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775255 55 - 92844088 CTTGTCA-CCCCCGTGGA-GCGTGGCGGCCAGTACCAACGTGGGCACTCTGGAGGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441311 55 + 96509753 CTTGTCA-CCCCTGTGGA-GCGTGGCGGCCAGTACCAACGTGGGCACTCTGGAGGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912090 55 - 16982598 CTTGTCA-CCCCTGTGGA-GCGTGGCGGCCAGTACCAACGTGGGCACTCTGGAGGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715203 55 - 3785965 CTTGTCA-CCCCTGTGGA-GTGTGGCGGCCAGTACCAACGTGGGCACTCTGGAGGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293422 55 - 90373283 CTTATCA-CCCCTGTGGA-GCGTGGTGGCCAGTACCAACGCGGGCACTCTGGAGGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107718 55 - 179258 CTTGTCA-CCCCTGTGGA-GTGTGGCGGCCAGTACCAACGTGGACACTCTGGAGGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583552 55 - 5823884 CTTCTCA-CCCCTGTGGA-GCGTGGCGGTCCGTACCAACGTGGGCACTCTGGAGGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64291 56 + 372756 CTTCTCACCCCCTGTGGA-GCATGGTGGCCAGTACCAACGTGGGCATTCTGGAAGCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299733 55 + 16356641 CTGCTCA-CCCCTGTGGA-GCATGGTGGCCAGTACCAGTGTGGGCATTCTGGAAGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168928 55 + 1231380 CTTCTCA-CCACTGTGGA-GCTTGGTGGCCAGTACCAGTGTGGGCATCCTGGAAGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700926 55 + 11732439 CTTCTCA-CCCCTGGGGA-GCATGGTGGCCAGTACGAACGTGGGCATTCTGGAAGCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1874938 55 - 2029793 CTTCTCA-CTTCTGTGGG-ACACGGTGGCCAGCACCAACCTGGGGGCTCTGGAGGCA i proCoq1.NW_012150197v1 I 109 I 949 s otoGar3.GL873542 22862920 54 + 22939663 CTTCTCA-CTT-TGTGGA-ACACAGTGGCCAGCACCAGTGTAGGCACTCTGGAGCCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807909 51 + 182113224 CTTCTCA-CCTCAACAGA-ATTTAGTGGGTAGCAACGATGTAGACTTTCCAAA---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47621941 53 + 47698779 CTCCTCA-CCTCGACGGGTGCACGCT---CGGCACCACCGTGGGCCCTTGGAAAGCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 260160 49 - 397369 ---CTCA-GACCCAGAAG-GCACTGGGTCTGGGGCC---TTAGGCAGAGGGGAAGCA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56879878 511 + 57149010 I a score=715694.000000 s hg38.chr20_KI270870v1_alt 128874 65 + 183433 TGGGGAGGAGAAAGGCATCGTTCAGATCCCAGGAGTTG-ATTGGGGAAAAGCTCAGGTTTCTTGGG s panTro5.chr20 66455082 65 + 66533130 CGGGGAGGAGAAAGGCATCGTTCAGATCCCAGGAGTTG-ATTGGGGAAAAGCTCAGGTTTCTTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130128 65 + 62195757 CGGGGAGGAGAAAGGCATCGTTCAGATCCCAGGAGTTG-ATTGGGGAAAAGCTCAGGTTTCTTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519209 65 - 578057 TGGGGAGGAGAAAGGCATCGTTCAGATCCCAGGAGATG-ATTGGGGAAAAGCTCAGGTTTCTTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041245 65 - 110113093 TGGGGAGGAGAAAGGCACCTTTCAGATCCCAGGAGTTG-ATTGGGGAAAAGCTCAGGTTTCTTGGG i nomLeu3.chr13 C 0 I 120 s rheMac8.chr10 92775310 65 - 92844088 TGGGGAGGAGAAAGGCATCTTTCAGATCCCATGAGTTG-ACTGGGGAAAAGCTCAGGTTTCTTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441366 65 + 96509753 TGGGGAGGAGAAAGGCATCTTTCAGATCCCATGAGTTG-ACTGGGGAAAAGCTCAGGTTTCTTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912145 65 - 16982598 TGGGGAGGAGAAAGGCATCTTTCAGATCCCATGAGTTG-ACTGGTGAGAAGCTCAGGTTTCTTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715258 65 - 3785965 TGGGGAGGAGAAAGGCGTCTTTCAGATCCCATGAGTTG-ACTGGGGAAAAGCTCAGGTTTCTTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293477 65 - 90373283 TGGGGAGGAGAAAGGCGTCTTTCAGATCCCATGAGTTG-ACTGGGGAAGAGCTCAGGTTTCTTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107773 65 - 179258 TGGGGAGGAGAAAGGCGTCTTTCAGATCCCATGAGCTG-ACTGGGGAAAAGCTCAGGTTTCTTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583607 64 - 5823884 TGGGGAGGAGAAAGGCGTCTTTCGGATCCCATGAGTTG-ACTGGGGAAAAGCTCAGGTTTCTT-GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64347 56 + 372756 TGGGGAGGAGAAGGGTATCCTTCAGATCCCAGGAGCTG-ATTGGGGAAAAG---------CTTGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299788 65 + 16356641 TGGGGAGGAGAAGGGCATCTTTCAGATCCCAGGAACTG-ATTGGGGAAAAGCTTGGGTTTCTTGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1168983 65 + 1231380 TGGGGAGGAGAAGGGCATCTTTCAGATCCCAGGAGCTG-ATTGGGGAAAAACTTGTGTTTCTTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2700981 64 + 11732439 TGGGGAGGAG-AGGGCATCTTTCAGATCCCAGGAGCTG-ACTGGGGAAAAGCCTGGGTTTCTTGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22862974 54 + 22939663 -----------CAGATCTGTTTTAGATCCCAGGAGACA-TCTGGGGACAAGCTCAGGGCTCCTGGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181807960 59 + 182113224 ----GAGGAGAGGGGTGTTTTGTATCTCCTAGG-GATG-ATTTGGGAAAAGCTT-GTTTTCTTGAG i mm10.chr2 C 0 I 15 s canFam3.chr24 47621994 66 + 47698779 TGGAGAGGAGGAGGGCTTCTTTCACATCCCAGGGGAGATACTTGGGAATGGCTCCCAATTCCTTGG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 260209 53 - 397369 ----------CAGGGCTCCT---GGATGCCATAGGTGGTGCCCCGGAGGCACTGAGCTTTCCCGGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e micMur3.chr18 56879878 511 + 57149010 I a score=143818.000000 s hg38.chr20_KI270870v1_alt 128939 19 + 183433 TTTTGAGCCTCCCAC-CAC-C- s panTro5.chr20 66455147 19 + 66533130 TTTTGAGCCTCCCAC-CAC-C- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130193 19 + 62195757 TTTTGAGCCTCCCAC-CAC-C- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519274 19 - 578057 TTTTGAGCCTCCCAC-CAC-C- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92775375 18 - 92844088 TTTTGAGCCTCCCAC-CAC--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441431 19 + 96509753 TTTTGAGCCTCCCAC-CACC-- i macFas5.chr10 C 0 I 3 s macNem1.NW_012014244v1 16912210 19 - 16982598 TTTTGAGCCTCCCAC-CACC-- i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3715323 18 - 3785965 TTTTGAGCCTCCCAC-CAC--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293542 18 - 90373283 TTTTGAGCCTCCCAC-CAC--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107838 18 - 179258 TTTTGAGCCTCCCAC-CAC--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583671 18 - 5823884 TTTTGAGCCTCCCAC-CAC--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64403 18 + 372756 TTTCGAGCCTCCTGG-CAC--- i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16299853 18 + 16356641 TTTCGAGCCTCCTGG-CAC--- i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1169048 18 + 1231380 TTTTGAGCCTCCTGG-CAC--- i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2701045 18 + 11732439 TTTCAAGCCTCCTGG-CAC--- i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22863028 19 + 22939663 TTTTGAGCCTCCTATGCGC--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181808034 18 + 182113224 TCCCAGGCTTCCTTG-CTC--- i mm10.chr2 I 15 I 17 s canFam3.chr24 47622061 18 + 47698779 TTTGTGGCCTCCCCC-CAA--- i canFam3.chr24 I 1 I 1 s dasNov3.JH569290 260262 19 - 397369 TCTGTGGGCTCCCAC-CAT--G i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e micMur3.chr18 56879878 511 + 57149010 I e nomLeu3.chr13 110041310 120 - 110113093 I a score=102980.000000 s hg38.chr20_KI270870v1_alt 128958 32 + 183433 CTGCAGAGCTAACCTGCTGTC-----CGGGTAGGGGC s panTro5.chr20 66455166 32 + 66533130 CTGCAGAGCTAACCTGCTGTC-----CAGGTAGGGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130212 32 + 62195757 CTGCAGAGCTAACCTGCTGTC-----CAGGTAGGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519293 32 - 578057 CTGCAGAGCTAACCTGCTGTC-----CAGGTAGGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chrUn_GL286459 64422 32 + 372756 CTGCAGAGCTGACCTGCTGTC-----CAGTTAAGGGC i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16299872 32 + 16356641 CTGCAGAGCTGACCTGCTGTC-----CAGATGGGGGC i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1169067 32 + 1231380 CTGCAGAGCTGACCTGCTGTC-----CAGACAGGGGC i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2701064 32 + 11732439 CTGCAGAGCTGAGCTGCTGTC-----CAGATAGGGGC i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22863047 24 + 22939663 -------------CTGCCATCTGGGGTAGACAGGGGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181808069 32 + 182113224 CCATCAATTGCAGTTGCTGTC-----CAGACAGTGGT i mm10.chr2 I 17 C 0 s canFam3.chr24 47622080 19 + 47698779 -------------CTGCTGTG-----CAGATAGGGAC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 260281 33 - 397369 CTGCAGGGTGCACCTGCTAGC----ACAGGTAGGTGC i dasNov3.JH569290 C 0 I 1601 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e cerAty1.NW_012001373v1 3715341 0 - 3785965 C e colAng1.NW_012114444v1 5583689 0 - 5823884 C e chlSab2.chr2 90293560 0 - 90373283 C e micMur3.chr18 56879878 511 + 57149010 I e manLeu1.NW_012101652v1 107856 0 - 179258 C e macNem1.NW_012014244v1 16912229 1 - 16982598 I e nomLeu3.chr13 110041310 120 - 110113093 I e rheMac8.chr10 92775393 0 - 92844088 C e macFas5.chr10 96441450 3 + 96509753 I a score=-105914.000000 s hg38.chr20_KI270870v1_alt 128990 25 + 183433 A--------------------------------------------------------------------GAGCCAGTGAGAGAGCTT---------AGGACC s panTro5.chr20 66455198 25 + 66533130 A--------------------------------------------------------------------GAGCCAGTGAGAGAGCTT---------AGGACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130244 25 + 62195757 A--------------------------------------------------------------------GAGCCAGTGAGAGAGCTT---------AGGACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519325 25 - 578057 A--------------------------------------------------------------------GAGCCAGTGAGAGAGCTT---------AGGACC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92775393 1 - 92844088 -----------------------------------------------------------------------------------------------------C i rheMac8.chr10 C 0 I 1 s cerAty1.NW_012001373v1 3715341 1 - 3785965 -----------------------------------------------------------------------------------------------------C i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90293560 1 - 90373283 -----------------------------------------------------------------------------------------------------C i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 107856 1 - 179258 -----------------------------------------------------------------------------------------------------C i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5583689 1 - 5823884 -----------------------------------------------------------------------------------------------------C i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chrUn_GL286459 64454 56 + 372756 CC----------------------------------------------AGCCACTTGGCTCCTTGGGCTGAGCCCATGAGAGAACTCCTGGCTCAGGGGTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299904 56 + 16356641 CC----------------------------------------------AGCCACTTGGCTCCTTGGGCTGAGCCCGTGAGAGAACTCCTGGCTCAGGGGTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169099 56 + 1231380 CC----------------------------------------------AGCCACTTGGCTCCTTGGGCTGAGCCCATGAGAGAACTCCTGGCTCAGGGGTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701096 42 + 11732439 CC----------------------------------------------AGCCACTTGGCTCCTTGGGCTGAGCCTGTGAGAGAAC--------------TCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22863071 46 + 22939663 T-----------------------------------------------TGGCTGTTGGCTCCTTGGGCTAAGGCAGTGAGAAAACTCCTGACC--------- i otoGar3.GL873542 C 0 I 9 s mm10.chr2 181808101 54 + 182113224 T-----------------------------------------------TGATGCCTGGTTCCTTGAACCAAGAGCAGTGAGGAACTTCTGGCACAGGGGTC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47622099 87 + 47698779 ACCCTGAGTTCTGGCAGCAGGCCCTCCTCACCATCCGCAGGACACCCTGGCCACCTGGCTCCTTGGACAGAGGCAGGGGGAATCTCC--------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e micMur3.chr18 56879878 511 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e macNem1.NW_012014244v1 16912229 1 - 16982598 I e nomLeu3.chr13 110041310 120 - 110113093 I e macFas5.chr10 96441450 3 + 96509753 I a score=373953.000000 s hg38.chr20_KI270870v1_alt 129015 40 + 183433 TGGGCTTAGGATCGCCCATGGTGGGCAGTT--CTACGTCCCC s panTro5.chr20 66455223 40 + 66533130 TGGGCTTAGGATCGCCCATGGTGGGCAGTT--CTACGTCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130269 40 + 62195757 TGGGCTTAGGATCGCCCATGGTGGGCAGTT--CTACGTCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519350 40 - 578057 TGGGCTTAGGATCGCCCATGGTGGGCAGTG--CTACGTCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92775395 40 - 92844088 TGGGCTTAGGATCGCCCATGGTGGGCGGTG--CCAGGTCCCT i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96441453 38 + 96509753 --GGCTTAGGATCGCCCATGGTGGGCGGTG--CCAGGTCCCT i macFas5.chr10 I 3 C 0 s macNem1.NW_012014244v1 16912230 40 - 16982598 TGGGCTTAGGATCGCCCATGATGGGCGGTG--CCAGGTCCCT i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3715343 40 - 3785965 TGGGCTTAGGATCACCCATGGTGGGCGGTG--CCAGGTCCCT i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90293562 40 - 90373283 TGGGCTTAGGATCGCCCATGGTGGGTGGTG--CCAGGTCCCT i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 107858 40 - 179258 TGGGCTTAGGATCGCCCATGGTGGGCGGTG--CCAGGTCCCT i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5583691 40 - 5823884 TGGGCTTAGGATCGCCCATGGTGGGCAGTG--CCAGGTCCCT i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chrUn_GL286459 64510 40 + 372756 TGGGCTTAGAATCTTCCATGGTGGGCAGTG--ACAGGTCTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16299960 40 + 16356641 TGGGCTTAGGATCTTCCATGGTGGGCAGTA--ACAGGTCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169155 40 + 1231380 TGGGCTTAGGATCTTCCAATGTGGGCAGTG--ACAGGTCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701138 40 + 11732439 TGGGCTGAGGATCTTCCATGGCGGGCAGTG--ACAGGTCCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22863126 42 + 22939663 TGGGCTTTGGATACCCTGTGGTGGGAAGTGGCCTGAGTCCTT i otoGar3.GL873542 I 9 C 0 s mm10.chr2 181808155 41 + 182113224 TTGGCATGGGATC-CTTGTGGTGGGCAAAGACCTGAGTTCCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47622186 41 + 47698779 AGGGCTCGGGAGCCGCCGTGCTGGGCAGTGGCCTGGGTCCC- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e micMur3.chr18 56879878 511 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e nomLeu3.chr13 110041310 120 - 110113093 I a score=137317.000000 s hg38.chr20_KI270870v1_alt 129055 13 + 183433 GAGACCAGGACCA------------------ s panTro5.chr20 66455263 13 + 66533130 GAGACCAGGACCA------------------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130309 13 + 62195757 GAGTCCAGGACCA------------------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519390 13 - 578057 AAGACCAGGACCA------------------ i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92775435 13 - 92844088 GAGACCAGGACCA------------------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441491 13 + 96509753 GAGACCAGGACCA------------------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912270 13 - 16982598 GAGACCAGGACCA------------------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715383 13 - 3785965 GAGACCAGGACCA------------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293602 13 - 90373283 GAGACCGGGACCA------------------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107898 13 - 179258 GAGACCAGGACCA------------------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583731 13 - 5823884 GAGACCAGGACCA------------------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64550 12 + 372756 GACACT-GGACCA------------------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300000 13 + 16356641 GAGACCAGGACCA------------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169195 13 + 1231380 GAGACCAGGACCA------------------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701178 13 + 11732439 GAGACCAGGACCA------------------ i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56880389 13 + 57149010 GAGACCAGGACTG------------------ i micMur3.chr18 I 511 C 0 s otoGar3.GL873542 22863168 13 + 22939663 GAGACCAGGGCCA------------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181808196 13 + 182113224 AAGATGACTACTG------------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47622227 31 + 47698779 AAGACCAGCGCCGCCTGGTGACGCGCAACAA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e dasNov3.JH569290 260314 1601 - 397369 I e nomLeu3.chr13 110041310 120 - 110113093 I a score=136387.000000 s hg38.chr20_KI270870v1_alt 129068 11 + 183433 ACCTGGCATGG s panTro5.chr20 66455276 11 + 66533130 ACCTGGCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130322 11 + 62195757 ACCTGGCATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519403 11 - 578057 ACCTGGCATGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041430 11 - 110113093 ACCTGGCGTGG i nomLeu3.chr13 I 120 C 0 s rheMac8.chr10 92775448 11 - 92844088 ACCTGGCGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441504 11 + 96509753 ACCTGGCGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912283 11 - 16982598 ACCTGGCGTGG i macNem1.NW_012014244v1 C 0 I 318 s cerAty1.NW_012001373v1 3715396 11 - 3785965 ACCTGGCGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293615 11 - 90373283 ACCTGGTGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107911 11 - 179258 ACCTGGCGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583744 11 - 5823884 CCCTGGCGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64562 11 + 372756 ACCTGGCGTAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300013 11 + 16356641 ACCTGGCGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169208 11 + 1231380 ACCTGGTGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701191 11 + 11732439 ACCTGGTGTGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56880402 11 + 57149010 ACCTGGCATGG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22863181 11 + 22939663 ACCTGGCAGTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181808209 10 + 182113224 -AATGGGGAGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47622258 11 + 47698779 GCCAGGCATCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e dasNov3.JH569290 260314 1601 - 397369 I a score=37149.000000 s hg38.chr20_KI270870v1_alt 129079 6 + 183433 GTGCTG s panTro5.chr20 66455287 6 + 66533130 GTGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130333 6 + 62195757 GTGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519414 6 - 578057 GTGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041441 6 - 110113093 GTGTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775459 3 - 92844088 ---CTG i rheMac8.chr10 C 0 I 3 s macFas5.chr10 96441515 3 + 96509753 ---CTG i macFas5.chr10 C 0 I 3 s cerAty1.NW_012001373v1 3715407 3 - 3785965 ---CTG i cerAty1.NW_012001373v1 C 0 I 3 s chlSab2.chr2 90293626 3 - 90373283 ---CTG i chlSab2.chr2 C 0 I 3 s manLeu1.NW_012101652v1 107922 3 - 179258 ---CTG i manLeu1.NW_012101652v1 C 0 I 3 s colAng1.NW_012114444v1 5583755 6 - 5823884 GTGTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64573 6 + 372756 GTGTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300024 6 + 16356641 GTGTTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169219 6 + 1231380 GTGTTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701202 6 + 11732439 GTGTTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56880413 5 + 57149010 GTGCT- i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22863192 6 + 22939663 GTGCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181808219 6 + 182113224 GAGCAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47622269 6 + 47698779 GTGCTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e dasNov3.JH569290 260314 1601 - 397369 I e macNem1.NW_012014244v1 16912294 318 - 16982598 I a score=280201.000000 s hg38.chr20_KI270870v1_alt 129085 21 + 183433 GAACTGTGGTCTGGGAAGCAG s panTro5.chr20 66455293 21 + 66533130 GAACTGTGGTCTGGGAAGCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130339 21 + 62195757 GAACTGTGGTCTGGGAAGCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519420 21 - 578057 GAACTGTGGTCTGGGAAGCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041447 21 - 110113093 GAACTGTGGTCTGGGAAGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775465 21 - 92844088 GAACTGTGATCTGGGAAGCAG i rheMac8.chr10 I 3 C 0 s macFas5.chr10 96441521 21 + 96509753 GAACTGTGATCTGGGAAGCAG i macFas5.chr10 I 3 C 0 s macNem1.NW_012014244v1 16912612 21 - 16982598 gaaCTGTGATCTGGGAAGCAG i macNem1.NW_012014244v1 I 318 C 0 s cerAty1.NW_012001373v1 3715413 21 - 3785965 GAACTGTGATCTGGGAAGCAG i cerAty1.NW_012001373v1 I 3 C 0 s chlSab2.chr2 90293632 21 - 90373283 GAACTGTGATCTGGGAAGCAG i chlSab2.chr2 I 3 C 0 s manLeu1.NW_012101652v1 107928 21 - 179258 GAACTGTGATCTGGGAAGCAG i manLeu1.NW_012101652v1 I 3 C 0 s colAng1.NW_012114444v1 5583761 21 - 5823884 GAACTGTGATCTGGGAAGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64579 21 + 372756 GAACTGTGGTCTGGGAAGCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300030 21 + 16356641 GAACTGTGGTCTGGGAAGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169225 21 + 1231380 GAAATGTCATCTGGGAAGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701208 21 + 11732439 AGACTGTGGTCTGGGAAGCAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56880418 21 + 57149010 GAGCTGTGGTCTGGGCAGCAG i micMur3.chr18 C 0 I 701 s otoGar3.GL873542 22863198 21 + 22939663 GAGCTGTCATCTGGGGAGCAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181808225 20 + 182113224 TAACT-TGGTATCAGAGTCTG i mm10.chr2 C 0 I 3 s canFam3.chr24 47622275 20 + 47698779 GAGTCGCAGTCTAGGGA-CGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e dasNov3.JH569290 260314 1601 - 397369 I a score=442331.000000 s hg38.chr20_KI270870v1_alt 129106 45 + 183433 GGGATCCTTCCCTTTTTAGTT----CCTTAAAACATGTGAAAGAAGAAT s panTro5.chr20 66455314 45 + 66533130 GGGATCCTTCCCTTTTTAGTT----CCTTAAAACATGTGAAAGAAGAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130360 45 + 62195757 GGGATCCTTCCCTTTTTAGTT----CCTTAAAACATGTGAAAGAAGAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519441 45 - 578057 GGGATCCTTCCCTTTTTAGTT----CCTTAAAACATGTGAAAGAAGAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041468 48 - 110113093 GGGATCCTTCCCTTTTTAGTTGT-CCCTTAAAACGTGTGAAAGAAGAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775486 48 - 92844088 GGGATCCTTCCCTTTTTAGTTAT-TCCTTAAAACATGTGAAAGAAGAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441542 48 + 96509753 GGGATCCTTCCCTTTTTAGTTAT-TCCTTAAAACATGTGAAAGAAGAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912633 48 - 16982598 GGGATCCTTCCCTTTTTAGTTAT-TCCTTAAAACATGTGAAAGAAGAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715434 48 - 3785965 GGGATCCTTCCCTTTTTAGTTAT-TCCTTAAAACATGTGAAAGAAGAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293653 48 - 90373283 GGGATCCTTCCCTTTTTAGTTAT-TCCTTAAAACATGTGAAAGAAGAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107949 48 - 179258 GGGATCCTTCCCTTTTTAGTTAT-TCCTTAAAACATGTGAAAGAAGAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583782 48 - 5823884 AGGATCCTTCCCTTTTTAGTTAT-TCCCTAAAACATGTGAAAGAAGAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64600 46 + 372756 GGGGTCCTTCCCTTTTTAGTTGT-TCCTTAGAAC--ATGAAAGAAAAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300051 46 + 16356641 GGGATCCTTCCCTTTTTAGTTGT-TTCTTAAAAC--GTGAAAGAAGAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169246 46 + 1231380 GGGATCCTTCCCTTTTTAGTTGT-TCCTTAAAAC--GTGAAAGAAGAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701229 46 + 11732439 GGGATCCTTCCCTTTTTAGTTGT-TCCTTAAAAC--ATGAAAGAAGAGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22863219 48 + 22939663 TGGAACTTTCATCTCCCAGTTAT-TCATTAAATCCTGTAATAGAAGAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181808248 45 + 182113224 TAGAGCATTCCTTTCCCTATTGT-TCT---ACACACCTGAATGTAAAAT i mm10.chr2 I 3 I 1440 s canFam3.chr24 47622295 42 + 47698779 GGGA--CATCCCTTCCTAATCGTGTCCCT----CTCTTGAGAGTGGAA- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e micMur3.chr18 56880439 701 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I a score=263935.000000 s hg38.chr20_KI270870v1_alt 129151 43 + 183433 CC-TCCGAGGCCACAGCCGGTTCTGGGCTTTTTCCCAAGGAGGT s panTro5.chr20 66455359 43 + 66533130 CC-TCCGAGGCCACAGCCGGTTCTGGGCTTTTTCCCAAGGAGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130405 43 + 62195757 CC-TCCGAGGCCACAGCCGGTTCTGGGCTTTTTCCCAAGGAGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519486 43 - 578057 CC-TCCGAGGCCACAGCCGGTTCTGGGCTTTTTCCCAAGGAGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041516 41 - 110113093 CC-TCAGAGTC--CAGCTAATTCTGGGCTTTTTCCCAAGGAGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775534 36 - 92844088 CC-TCAGAGGC------TAATTCTGGG-CTTTTCCCGAGGAGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441590 36 + 96509753 CC-TCAGAGGC------TAATTCTGGG-CTTTTCCCGAGGAGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912681 36 - 16982598 CC-TCAGAGGC------TAATTCTGGG-CTTTTCCCGAGGAGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715482 36 - 3785965 CC-TCAGAGGC------TAATTCTGGG-CTTTTCCCGAGGAGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293701 36 - 90373283 CC-TCAGAGGC------TAATTCTGGG-CTTTTCCCGAGGAGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 107997 36 - 179258 CC-TCAGAGGC------TAATTCTGGG-CTTTTCCCGAGGAGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583830 37 - 5823884 CC-TCAGAGGC------TAATTCTGGGTTTTTTCCCAAGGAGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64646 39 + 372756 CC-TCAGAGCC--AAGGGAATTCTGGGCTTCTTCCAGGAGAC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300097 39 + 16356641 CC-GCAGAGCC--AAGCGAATTCTGGGCTTTTTCCCGAGGAG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169292 39 + 1231380 CC-TCAGAGCC--AAGCGAATTCTGGGCTTTTTCCCGAGGAG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701275 41 + 11732439 CC-TCAGAGCC--AAGCGAATTCTGGGCTTTTTCCCGAGGAGAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22863267 42 + 22939663 CCTTCAGATTC--TGACTGATTCCAGGCTTTTCCCCAAGGAGGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47622337 28 + 47698779 ----------------CTGATGGAAGGCTCTTCCCCAAAGAGGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1874993 949 - 2029793 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56880439 701 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I a score=42885.000000 s hg38.chr20_KI270870v1_alt 129194 3 + 183433 GTG s panTro5.chr20 66455402 3 + 66533130 GTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130448 3 + 62195757 GTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519529 3 - 578057 GTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041557 3 - 110113093 GTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775570 3 - 92844088 GTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441626 3 + 96509753 GTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912717 3 - 16982598 GTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715518 3 - 3785965 GTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293737 3 - 90373283 GTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108033 3 - 179258 GTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583867 3 - 5823884 GTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64685 3 + 372756 GTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300136 3 + 16356641 GTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169331 3 + 1231380 GTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701316 3 + 11732439 GTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1875942 3 - 2029793 GTG i proCoq1.NW_012150197v1 I 949 C 0 s otoGar3.GL873542 22863309 1 + 22939663 --G i otoGar3.GL873542 C 0 I 2 s canFam3.chr24 47622365 3 + 47698779 GTG i canFam3.chr24 C 0 C 0 e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56880439 701 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I a score=492025.000000 s hg38.chr20_KI270870v1_alt 129197 36 + 183433 TGTCCTGAAGAGCAAAGTCCAGCTGTGAGGGCAGCC s panTro5.chr20 66455405 36 + 66533130 TGTCCGGAAGAGCAAAGTCCAGCTGTGAGGGCAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130451 36 + 62195757 TGTCCGGAAGAGCAAAGTCCAGCTGTGAGGGCAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519532 36 - 578057 TGTCCTGAAGAGCAAAGTCCAGCTGTGAGGGCAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041560 36 - 110113093 TGTCCTGAAGAGCAAAGTCCAGTTGTGAGGGCAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775573 36 - 92844088 TGTCCTGAAGAGAAAAGTCTAGCTCTGAGGGCAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441629 36 + 96509753 TGTCCTGAAGAGAAAAGTCCAGCTCTGAGGGCAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912720 36 - 16982598 TGTCCTGAAGAGAAAAGTCCAGCTCTGAGGGCCGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715521 36 - 3785965 TGTCCTGAAGAGAAAAGTCCAGCTCTGAGGGCAGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293740 36 - 90373283 TGTCCTGAAGAGAAAAGTCCAGCTCTGAGGGCAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108036 36 - 179258 TGTCCTGAAGAGAAAAGTCCAGCTCTGAGGGCAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583870 36 - 5823884 TGTCCTGAAGAGAAAAGTCCAGCTCTGAGGGCAGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64688 36 + 372756 TGTCTTGAAGGGCAAAGTCCAGCTCTGAGGGCAGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300139 36 + 16356641 TGTCCTGAAGGGCAAAGTCCAGCTCTGAGGGCAGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169334 36 + 1231380 TGTCCTGAACGGCCAAGTCCAGCTCTGAGGGCAGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701319 19 + 11732439 TGTCCTGAAGGGCAAAGT-----------------C i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56881140 36 + 57149010 TGTCCCGAAGAGCAAGGTCCAGCTCTGAGGGCAGCC i micMur3.chr18 I 701 C 0 s proCoq1.NW_012150197v1 1875945 36 - 2029793 TGTCCTGAAGAGCCAAGTCTGGCTCTGAGGGCAGCC i proCoq1.NW_012150197v1 C 0 I 1936 s otoGar3.GL873542 22863312 36 + 22939663 TGTCCTGAGGAGCAAAGTCCAGCTCTGAGGGCAGCC i otoGar3.GL873542 I 2 C 0 s canFam3.chr24 47622368 36 + 47698779 AGTCCTGAGTAGCAAAGCGCAGCTGTGGGAATGGCA i canFam3.chr24 C 0 C 0 e mm10.chr2 181808293 1440 + 182113224 I e dasNov3.JH569290 260314 1601 - 397369 I a score=182012.000000 s hg38.chr20_KI270870v1_alt 129233 15 + 183433 CAGGGTCCAGGC-GGC s panTro5.chr20 66455441 15 + 66533130 CAGGGTCCAGGC-GGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130487 15 + 62195757 CAGGGTCCAGGG-GGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519568 14 - 578057 CAGGGT-CAGGC-GGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041596 15 - 110113093 CAGGGTCCAGGT-GGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775609 15 - 92844088 CAGGGTCCAGGT-GGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441665 15 + 96509753 CAGGGTCCAGGT-GGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912756 15 - 16982598 CAGGGTCCAGGT-GGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715557 15 - 3785965 CAGGGTCCAGGT-GGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293776 15 - 90373283 CAGGGTCCAGGT-GGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108072 15 - 179258 CAGGGTCCAGGT-GGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583906 15 - 5823884 CAGGGTCCAGGT-GGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64724 16 + 372756 CAGGGTCTAGGCGGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300175 15 + 16356641 CAGGGTCTAGGT-GGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169370 15 + 1231380 CAGGGTCTAGGC-GGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701338 15 + 11732439 CAGGGTCTAGGC-AGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56881176 15 + 57149010 CAGGGTGCAGGT-GGC i micMur3.chr18 C 0 I 1858 s otoGar3.GL873542 22863348 15 + 22939663 TAGGGTCCAGTC-GGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47622404 15 + 47698779 CAGACTCCAGGT-AGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e mm10.chr2 181808293 1440 + 182113224 I e dasNov3.JH569290 260314 1601 - 397369 I a score=606896.000000 s hg38.chr20_KI270870v1_alt 129248 62 + 183433 AGCAGCCGCGTGTGTG----------------------AGACTAGCAGGCCC------CTCTCCCTCTCCTTCCCCTCCCCCAAAGCCCC s panTro5.chr20 66455456 62 + 66533130 AGCAGCCGCGTGTGTG----------------------AGACTAGCGGGCCC------CTCTCCCTCTCCTTCCCCTCCCCCAAAGCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130502 62 + 62195757 AGCAGCCGCGTGTGTG----------------------AGACTAGCGGGCCC------CTCTCCCTCTCCTTCCCCTCCCCCAAAGCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519582 62 - 578057 AGCAGCGGCGTGTGTG----------------------AGACTAGCAGGCCC------CTCTCCCTCTCCTTCCCCTCCCCTAAAGCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041611 62 - 110113093 ACCAGCGGCATGTGTG----------------------AGACTAGCAGGCCC------CTCTCCCTCTCCTTCCCCTCCCCTAAAGCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775624 68 - 92844088 AGCAGCGGCGTGTGTG----------------------AGACTAGCAGGCccctctctctctccctctccttcccctcccctAAAGCCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441680 68 + 96509753 AGCAGCGGCGTGTGTG----------------------AGACTAGTAGGCccctctctctctccctctccttcccctcccctAAAGCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912771 68 - 16982598 AGCAGCGGCGTGTGTG----------------------AGACTAGCAGGCccctctctctctccctctccttcccctcccctAAAGCCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715572 68 - 3785965 AGCAGCAGCGTGTGTG----------------------AGACTAGCAGGCccctctctctctccctctccttcccctcccctAAAGCCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293791 68 - 90373283 AGCAGCGGCGTGTGTG----------------------AGACTAGCAGGCccctctctctctccctctccttcccctcccctAAAGCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108087 68 - 179258 AGCAGCAGCGTGTGTG----------------------AGACTAGCAGGCccctctctctctccctctccttcccctcccctAAAGCCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583921 68 - 5823884 AGCAGCGGCATGTGTG----------------------AGACTAGCAGGCTcctctctctctccctctccttcccctcccctAAAGCCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64740 62 + 372756 ACCAGCTGCATCTGTG----------------------AGACTAGCAGGCCC------CTTTCTCTCTCCTTCCCCTCCTTGCAAGCCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300190 62 + 16356641 ACCAGCTGCATCTGTG----------------------AGACTGGCCGGACC------CCCTCTCTCTCCTTCCCCTCCTTGCAAGCCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169385 62 + 1231380 ACCAGCCGCATCTGTG----------------------AGACTAGCAGGCCC------CTTTCTCTCTCCTTCCCCTCCTTGCAAGCCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701353 62 + 11732439 ACCAGCCGCATCTGTG----------------------AGACTAGCGGGCCC------CTTTCTCTCTCCTTCCCCTCCTTGCAAGCCCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22863363 47 + 22939663 ATTTGTTGCGTTTGTG----------------------AGGCCTGCAGATCC------CTCTCCCCCTCT---------------GCCCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47622419 83 + 47698779 --CACCCTGGAGTGGGCACCCAGGGCCACACTGGGGGCAGGCCTGCAGGTCCC-----CCCTTTCTCCCCGTCATCCCCGCCAGCACCCC i canFam3.chr24 C 0 I 97 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I a score=90603.000000 s hg38.chr20_KI270870v1_alt 129310 8 + 183433 TCAGGAGG s panTro5.chr20 66455518 8 + 66533130 TCAGGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130564 8 + 62195757 TCAGGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519644 8 - 578057 GCAGGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041673 8 - 110113093 TCAGGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775692 8 - 92844088 TCAGGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441748 8 + 96509753 TCAGGAGG i macFas5.chr10 C 0 I 3 s macNem1.NW_012014244v1 16912839 8 - 16982598 TCAGGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715640 8 - 3785965 TCAGGAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293859 8 - 90373283 TCAGGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108155 8 - 179258 TCAGGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583989 8 - 5823884 TCAGGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64802 8 + 372756 TCAGAAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300252 8 + 16356641 GCAGGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169447 8 + 1231380 TCAGGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701415 8 + 11732439 TCAGGAGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22863410 8 + 22939663 TTAAGAAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I a score=26655.000000 s hg38.chr20_KI270870v1_alt 129318 3 + 183433 TGG- s panTro5.chr20 66455526 3 + 66533130 TGG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130572 3 + 62195757 TGG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519652 3 - 578057 TGG- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041681 3 - 110113093 TGG- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775700 3 - 92844088 TGG- i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912847 3 - 16982598 TGG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715648 3 - 3785965 TGG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293867 3 - 90373283 TGG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108163 3 - 179258 TGG- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5583997 3 - 5823884 TGG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64810 3 + 372756 TGG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300260 3 + 16356641 TGG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169455 3 + 1231380 TGG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701423 3 + 11732439 TGG- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22863418 3 + 22939663 -GGA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e macFas5.chr10 96441756 3 + 96509753 I a score=168216.000000 s hg38.chr20_KI270870v1_alt 129321 15 + 183433 AA-GG-------GGTCCCTGTGG s panTro5.chr20 66455529 15 + 66533130 AA-GG-------GGTCCCTGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130575 15 + 62195757 AA-GG-------GGTCCCTGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519655 15 - 578057 AA-GG-------GGTCCCTGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041684 15 - 110113093 AA-GG-------GGTCCCTGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775703 15 - 92844088 AA-GG-------GGTCCCTGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441759 15 + 96509753 AA-GG-------GGTCCCTGTGG i macFas5.chr10 I 3 C 0 s macNem1.NW_012014244v1 16912850 15 - 16982598 AA-GG-------GGTCCCTGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715651 15 - 3785965 AA-GG-------GGTCCCTGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293870 15 - 90373283 AA-GG-------GGTCCCTGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108166 15 - 179258 AA-GG-------GGTCCCTGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584000 15 - 5823884 AA-GG-------GGTCCCTGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64813 15 + 372756 AA-GG-------GGTCCCTGTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300263 15 + 16356641 AA-GG-------GGTCCCTGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169458 16 + 1231380 AAGGG-------GGTCCTTGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701426 15 + 11732439 AA-GG-------GGTCCCTGTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22863421 22 + 22939663 AG-GGTTggctcggcgcctgtgg i otoGar3.GL873542 C 0 I 1361 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I a score=485788.000000 s hg38.chr20_KI270870v1_alt 129336 44 + 183433 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGGGGTGGGG s panTro5.chr20 66455544 44 + 66533130 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGGGGTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130590 44 + 62195757 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGGGGTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519670 44 - 578057 AAGGAGCAGGGCCAGACCCTCAAGGACGAATGAGGGGGGTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041699 44 - 110113093 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGGGGTAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775718 44 - 92844088 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGAGGTGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441774 44 + 96509753 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGAGGTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912865 44 - 16982598 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGAGGTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715666 44 - 3785965 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGAGGTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293885 44 - 90373283 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGAGGTGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108181 44 - 179258 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGAGGTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584015 44 - 5823884 AAGGAGCAGGGCCAGACCCTCAAGGAGGAATGAGGGAGGTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64828 44 + 372756 AAGGAGCAGGGCCAGACCCCCAAGGAGGAATGAGGGAGCTGGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300278 44 + 16356641 AAGGAGCAGGGCCAGACCCCCAAGGAGGAATGAGGGAGGTGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169474 44 + 1231380 AAGGAGCAGGGCCAGACCCCCAAGGAGGAATGAGGGAGGTGGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701441 44 + 11732439 AAGGAGCGGGGCCAGACCCCCAAGGAGGAATGAGGGAGGTGGGG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e otoGar3.GL873542 22863443 1361 + 22939663 I a score=10500.000000 s hg38.chr20_KI270870v1_alt 129380 1 + 183433 C s panTro5.chr20 66455588 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130634 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519714 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92775762 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441818 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912909 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715710 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293929 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108225 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584059 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64872 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300322 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169518 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701485 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e nomLeu3.chr13 110041743 0 - 110113093 C e otoGar3.GL873542 22863443 1361 + 22939663 I a score=10920.000000 s hg38.chr20_KI270870v1_alt 129381 1 + 183433 T s panTro5.chr20 66455589 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130635 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519715 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041743 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775763 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441819 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912910 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715711 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293930 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108226 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584060 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64873 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300323 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169519 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 I 2 s aotNan1.NW_018500483v1 2701486 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e otoGar3.GL873542 22863443 1361 + 22939663 I a score=7221.000000 s hg38.chr20_KI270870v1_alt 129382 4 + 183433 AGGC s gorGor5.CYUI01015848v1 519716 4 - 578057 AGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041744 4 - 110113093 AGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775764 4 - 92844088 AGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441820 4 + 96509753 AGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912911 4 - 16982598 AGGC i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5584061 4 - 5823884 AGGC i colAng1.NW_012114444v1 C 0 C 0 s cebCap1.NW_016107870v1 1169522 2 + 1231380 AG-- i cebCap1.NW_016107870v1 I 2 C 0 s aotNan1.NW_018500483v1 2701487 4 + 11732439 AGGG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e cerAty1.NW_012001373v1 3715712 0 - 3785965 C e chlSab2.chr2 90293931 0 - 90373283 C e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e panPan2.chr20 62130636 0 + 62195757 C e manLeu1.NW_012101652v1 108227 0 - 179258 C e saiBol1.JH378156 16300324 0 + 16356641 C e calJac3.chrUn_GL286459 64874 0 + 372756 C e panTro5.chr20 66455590 0 + 66533130 C e otoGar3.GL873542 22863443 1361 + 22939663 I a score=33966.000000 s hg38.chr20_KI270870v1_alt 129386 18 + 183433 CCCTATGAAGGGTGGGGG s gorGor5.CYUI01015848v1 519720 18 - 578057 CCCTATGAAGGGTGGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041748 18 - 110113093 CCCTATGAAGGGTGGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775768 18 - 92844088 CCCTATGAAGGGTGCGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441824 18 + 96509753 CCCTATGAAGGGTGCGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912915 18 - 16982598 CCCTATGAAGGGTGCGGG i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5584065 18 - 5823884 CCCTATGAAGGGTGGGGG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e cerAty1.NW_012001373v1 3715712 0 - 3785965 C e chlSab2.chr2 90293931 0 - 90373283 C e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e panPan2.chr20 62130636 0 + 62195757 C e manLeu1.NW_012101652v1 108227 0 - 179258 C e saiBol1.JH378156 16300324 0 + 16356641 C e cebCap1.NW_016107870v1 1169524 0 + 1231380 C e calJac3.chrUn_GL286459 64874 0 + 372756 C e aotNan1.NW_018500483v1 2701491 0 + 11732439 C e panTro5.chr20 66455590 0 + 66533130 C e otoGar3.GL873542 22863443 1361 + 22939663 I a score=18725.000000 s hg38.chr20_KI270870v1_alt 129404 14 + 183433 CTGGATCAGGCCCC s nomLeu3.chr13 110041766 14 - 110113093 CTGGATGGGGCCCC i nomLeu3.chr13 C 0 T 37 s rheMac8.chr10 92775786 14 - 92844088 CTGGATCAGGCCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441842 14 + 96509753 CTGGATCAGGCCCC i macFas5.chr10 C 0 T 62 s macNem1.NW_012014244v1 16912933 14 - 16982598 CTGGATCAGGCCCC i macNem1.NW_012014244v1 C 0 C 0 s colAng1.NW_012114444v1 5584083 14 - 5823884 CTGGATCAGGCCCC i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e cerAty1.NW_012001373v1 3715712 0 - 3785965 C e chlSab2.chr2 90293931 0 - 90373283 C e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e panPan2.chr20 62130636 0 + 62195757 C e gorGor5.CYUI01015848v1 519738 0 - 578057 C e manLeu1.NW_012101652v1 108227 0 - 179258 C e saiBol1.JH378156 16300324 0 + 16356641 C e cebCap1.NW_016107870v1 1169524 0 + 1231380 C e calJac3.chrUn_GL286459 64874 0 + 372756 C e aotNan1.NW_018500483v1 2701491 0 + 11732439 C e panTro5.chr20 66455590 0 + 66533130 C e otoGar3.GL873542 22863443 1361 + 22939663 I a score=-1383.000000 s hg38.chr20_KI270870v1_alt 129418 79 + 183433 TATGAAGGGTAGGGGCTGGATCAGGCCCCTATGAAGGGTGGGGGCTGGATCAGGCCCCTATGAAGGGTGGGGGCTGGAT s macFas5.chr10 96441794 25 + 96509753 CAAGGAGGA---------------------ATGAGGGA---------------------------GGTGGGG------C i macFas5.chr10 T 62 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e cerAty1.NW_012001373v1 3715712 0 - 3785965 C e colAng1.NW_012114444v1 5584097 0 - 5823884 C e chlSab2.chr2 90293931 0 - 90373283 C e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e panPan2.chr20 62130636 0 + 62195757 C e gorGor5.CYUI01015848v1 519738 0 - 578057 C e manLeu1.NW_012101652v1 108227 0 - 179258 C e saiBol1.JH378156 16300324 0 + 16356641 C e macNem1.NW_012014244v1 16912947 0 - 16982598 C e cebCap1.NW_016107870v1 1169524 0 + 1231380 C e calJac3.chrUn_GL286459 64874 0 + 372756 C e aotNan1.NW_018500483v1 2701491 0 + 11732439 C e panTro5.chr20 66455590 0 + 66533130 C e nomLeu3.chr13 110041780 37 - 110113093 T e rheMac8.chr10 92775800 0 - 92844088 C e otoGar3.GL873542 22863443 1361 + 22939663 I a score=29.000000 s hg38.chr20_KI270870v1_alt 129497 1 + 183433 C s nomLeu3.chr13 110041743 1 - 110113093 T i nomLeu3.chr13 T 37 C 0 s macFas5.chr10 96441819 1 + 96509753 T i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e cerAty1.NW_012001373v1 3715712 0 - 3785965 C e colAng1.NW_012114444v1 5584097 0 - 5823884 C e chlSab2.chr2 90293931 0 - 90373283 C e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e panPan2.chr20 62130636 0 + 62195757 C e gorGor5.CYUI01015848v1 519738 0 - 578057 C e manLeu1.NW_012101652v1 108227 0 - 179258 C e saiBol1.JH378156 16300324 0 + 16356641 C e macNem1.NW_012014244v1 16912947 0 - 16982598 C e cebCap1.NW_016107870v1 1169524 0 + 1231380 C e calJac3.chrUn_GL286459 64874 0 + 372756 C e aotNan1.NW_018500483v1 2701491 0 + 11732439 C e panTro5.chr20 66455590 0 + 66533130 C e rheMac8.chr10 92775800 0 - 92844088 C e otoGar3.GL873542 22863443 1361 + 22939663 I a score=13995.000000 s hg38.chr20_KI270870v1_alt 129498 4 + 183433 AGGC s panTro5.chr20 66455590 4 + 66533130 AGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130636 4 + 62195757 AGGC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110041744 4 - 110113093 AGGC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96441820 4 + 96509753 AGGC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3715712 4 - 3785965 AGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293931 4 - 90373283 AGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108227 4 - 179258 AGGC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 64874 4 + 372756 AGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300324 4 + 16356641 AGGG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e colAng1.NW_012114444v1 5584097 0 - 5823884 C e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e gorGor5.CYUI01015848v1 519738 0 - 578057 C e macNem1.NW_012014244v1 16912947 0 - 16982598 C e cebCap1.NW_016107870v1 1169524 0 + 1231380 C e aotNan1.NW_018500483v1 2701491 0 + 11732439 C e rheMac8.chr10 92775800 0 - 92844088 C e otoGar3.GL873542 22863443 1361 + 22939663 I a score=114419.000000 s hg38.chr20_KI270870v1_alt 129502 19 + 183433 CCCTATGAAGGGTGGGGGC s panTro5.chr20 66455594 19 + 66533130 CCCTATGAAGGGTGGGGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130640 19 + 62195757 CCCTATGAAGGGTGGGGGC i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110041748 19 - 110113093 CCCTATGAAGGGTGGGGGC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96441824 19 + 96509753 CCCTATGAAGGGTGCGGGC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3715716 19 - 3785965 CCCTATGAAGGGTGCGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293935 19 - 90373283 CCCTATGAAGGGTGGGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108231 19 - 179258 CCCTATGAAGGGTGCGGGC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 64878 19 + 372756 CCCTATGAAGGGTGGGGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300328 19 + 16356641 CCCTGTGAAGGGTGGGGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169524 19 + 1231380 CCCTATGAAGGGTGGGGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701491 19 + 11732439 CCCTATGAAGGGTGGGGGC i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e colAng1.NW_012114444v1 5584097 0 - 5823884 C e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e gorGor5.CYUI01015848v1 519738 0 - 578057 C e macNem1.NW_012014244v1 16912947 0 - 16982598 C e rheMac8.chr10 92775800 0 - 92844088 C e otoGar3.GL873542 22863443 1361 + 22939663 I a score=80241.000000 s hg38.chr20_KI270870v1_alt 129521 13 + 183433 TGGATCAGGCCCC s panTro5.chr20 66455613 13 + 66533130 TGGATCAGGCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130659 13 + 62195757 TGGATCAGGCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519738 13 - 578057 TGGATCAGGCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041767 13 - 110113093 TGGATGGGGCCCC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96441843 13 + 96509753 TGGATCAGGCCCC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3715735 13 - 3785965 GGGATCAGGTCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293954 13 - 90373283 TGGATCAGGCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108250 13 - 179258 TGGATCAGGCCCC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 64897 13 + 372756 TGGGTCAGGCCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300347 13 + 16356641 TGGGTGAGGCCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169543 13 + 1231380 TAGATCAGGCCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701510 13 + 11732439 TGGGTCAGGCCGC i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e colAng1.NW_012114444v1 5584097 0 - 5823884 C e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e macNem1.NW_012014244v1 16912947 0 - 16982598 C e rheMac8.chr10 92775800 0 - 92844088 C e otoGar3.GL873542 22863443 1361 + 22939663 I a score=6600.000000 s hg38.chr20_KI270870v1_alt 129534 1 + 183433 C s panTro5.chr20 66455626 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130672 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519751 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041780 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3715748 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293967 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108263 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 64910 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300360 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169556 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701523 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e colAng1.NW_012114444v1 5584097 0 - 5823884 C e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e macNem1.NW_012014244v1 16912947 0 - 16982598 C e rheMac8.chr10 92775800 0 - 92844088 C e otoGar3.GL873542 22863443 1361 + 22939663 I e macFas5.chr10 96441856 0 + 96509753 C a score=381082.000000 s hg38.chr20_KI270870v1_alt 129535 41 + 183433 TCCACAATCCGGCCTCAGT-GGGAGGCAGACT---TCCTTACCGG s panTro5.chr20 66455627 41 + 66533130 TCCATAATCCGGCCTCAGT-GGGAGGCAGACT---TCCTTACCGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130673 41 + 62195757 TCCATAATCCGGCCTCAGT-GGGAGGCAGACT---TCCTTACCGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519752 40 - 578057 TGCATAATCCGGCCTCAGT-GGGA-GCAGACT---TCCTTGCCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041781 41 - 110113093 TCCATAATCCGGCCTCAGT-GGGAGCCAGATT---TCCTCACTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775800 42 - 92844088 TCCATAATCCGGCCTCAGTGGGGAGCCAGACT---TCCTCACTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441856 42 + 96509753 TCCATAATCCGGCCTCAGTGGGGAGCCAGACT---TCCTCACTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912947 42 - 16982598 TCCATAATCCGGCCTCAGTGGGGAGCCAGACT---TCCTCACTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715749 42 - 3785965 TCCATAATCCGGCCTCAGTGGGGAGCCAGACT---TCCTCACTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90293968 42 - 90373283 TCCATAATCCAGCCTCAGTGGGGAGCCAGACT---TCCTCACTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108264 42 - 179258 TCCATAATCCGGCCTCAGTGGGGAGCCAGACT---TCCTCACTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584097 42 - 5823884 TCCATAATCCGGCCTCAGCAGGGAGCCAGACT---TCCTCACCGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64911 41 + 372756 TCCATAATCCGGCCTCAGT-GGGAGCCAGAAT---TCCTCACTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300361 41 + 16356641 TCCATAATCCAGGCTCAGT-GGGAGCCAGAAT---TCCTCACTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169557 44 + 1231380 TCCATAATCCGGCCTCAGT-GGGAGCCAGAATTCCTCCTCACTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701524 41 + 11732439 TCCATAATCCGGCCTCAGT-GGGAGCCAGAAT---TCCTCACTGG i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622502 97 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e otoGar3.GL873542 22863443 1361 + 22939663 I a score=613814.000000 s hg38.chr20_KI270870v1_alt 129576 65 + 183433 CCCTCACACCACCCTCAGG------------TCA-CCCCATTTCATAGACGAGCAGCCTGGGAACCCACAACGAGGTC s panTro5.chr20 66455668 65 + 66533130 CCCTCACACCACCCTCAGG------------TCA-CCCCATTTCATAGACGAGCAGCCTGGGAACCCACAACAAGGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130714 65 + 62195757 CCCTCACACCACCCTCAGG------------TCA-CCCCATTTCATAGACGAGCAGCCTGGGAACCCACAACAAGGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519792 62 - 578057 CCCTCACACCACCCTCACG------------TCACCCCCATTTCATAGA----CAGCCTGGGAACCCACAACAAGGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041822 65 - 110113093 CCCTCACACCACCCTCAGG------------TCA-CCCCATTTTATAGAGGAGCAGCCTGGGACCCCACAACAAGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775842 65 - 92844088 CTCCCACACCACCCTCAGG------------TTG-CCGCATTTTATAGAGGAGGAGCCTGGGAACCCACAACAAGGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441898 65 + 96509753 CTCCCACACCACCCTCAGG------------TTG-CCGCATTTTATAGAGGAGGAGCCTGGGAACCCACAACAAGGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16912989 65 - 16982598 CTCCCACACCACCCTCAGG------------TTG-CCGCATTTTATAGAGGAGGAGCCTGGGAACCCACAACAAGGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715791 65 - 3785965 TTCCCACACCACCCTCAGG------------TTG-CCGCATTTTATAGAGGAGGAGCCTGGGAACCCACAACGAGGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294010 65 - 90373283 CTCCCACACCACCCTCAGG------------TTG-CCCCATTTTATAGAGGAGGAGCCTGGGAACCCACAACAAGGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108306 65 - 179258 CTCCCACACCACCCTCAGG------------TTG-CCGCATTTTATAGAGGAGGAGCCTGGGAACCCACAACAAGGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584139 65 - 5823884 CTCTCACACCACCCTCAGG------------TCG-CCCCATTTTATAGAGGAGGAGCCTGGGAACCCAGGACAAGTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 64952 77 + 372756 CCCTCATCCCACCCTCAGGTGGGCCTCACAATTA-CCCAATTTTATAGAGGAGCAGCCTGGGAGCCCACAACAAGGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300402 77 + 16356641 CCCTCATCCCACCCTCAGGTGGACCTCACAATCA-CCCCATTTTATAGAGGAGCAGCCTGGGAGCCCACAACAAGGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169601 77 + 1231380 CCCTCATCCCACCCTCAGGTGGGCCTCACAATCA-CCCCATTTTATAGAGGAGCAGCCTGGGAGCCCACAACAAGGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701565 77 + 11732439 CCCTCATCCCACCCTCAGGTGGGCCTCACAATCA-CCCCATTTTGTAGAGGAGTAGCCTGGGAGCCCACAACAAGGTC i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47622599 64 + 47698779 CCTCTACACCACTCACAGG------------TGT-CTCTGCTTCATGGAGGAGCAGACTGGG-CCCCACGCTGGGGTC i canFam3.chr24 I 97 I 1202 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e otoGar3.GL873542 22863443 1361 + 22939663 I a score=143414.000000 s hg38.chr20_KI270870v1_alt 129641 20 + 183433 CA------ATTATCCGAAGACTGTTA s panTro5.chr20 66455733 20 + 66533130 CA------ATTATCCGAAGACTGTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130779 20 + 62195757 CA------ATTATCCGAAGACTGTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519854 20 - 578057 CA------ATTATCCGAAGACTGTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041887 20 - 110113093 CA------ATTACCCGAAGACTGTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775907 20 - 92844088 TG------ATTGTCCGAAGACTGTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441963 20 + 96509753 TG------ATTGTCCGAAGACTGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913054 20 - 16982598 TG------ATTGTCCGAAGACTGTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715856 20 - 3785965 TG------ATTGTCCGAAGACTGTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294075 20 - 90373283 TG------ATTGTCCGAAGACTGTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108371 20 - 179258 TG------ATTGTCCGAAGACTGTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584204 20 - 5823884 CA------ATTGTCCGAAGACTGTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 65029 26 + 372756 Cgctcccaattatccaaatactgtta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300479 26 + 16356641 CActcccaattatccaaagactgtta i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169678 26 + 1231380 CACTTCCAATTATCCAAAGACTGTTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701642 24 + 11732439 CACCCCCTATTATCC--AGactgtta i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622663 1202 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I e otoGar3.GL873542 22863443 1361 + 22939663 I a score=157804.000000 s hg38.chr20_KI270870v1_alt 129661 15 + 183433 TTATGctgggctgt-g s panTro5.chr20 66455753 15 + 66533130 TTATGctgggccgt-g i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130799 15 + 62195757 TTATGctgggccgt-g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519874 16 - 578057 TTATGCTGGGCCGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041907 15 - 110113093 TTATGctgggccgt-g i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775927 15 - 92844088 TTATGCTGGGCCGT-G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441983 15 + 96509753 TTATGctgggccgt-g i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913074 15 - 16982598 TTATGCTGGGCCGT-G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715876 15 - 3785965 TTATGCTGGGCCGT-G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294095 15 - 90373283 TTATGctgggccgt-g i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108391 15 - 179258 TTATGCTGGGCCGT-G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584224 15 - 5823884 TTATGCTGGGCCGC-G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 65055 15 + 372756 ttatgctgggctgt-g i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300505 15 + 16356641 ctatgctgggctat-g i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169704 15 + 1231380 TTATGctgggctgt-g i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701666 15 + 11732439 ccgtgctgggctgt-g i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22864804 14 + 22939663 TTATGCT-GACCAT-G i otoGar3.GL873542 I 1361 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622663 1202 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I e dasNov3.JH569290 260314 1601 - 397369 I a score=1981132.000000 s hg38.chr20_KI270870v1_alt 129676 193 + 183433 ggcttcacgggcatttcctcatttgac-ccccaa--aaacctttgaggggctgctgttatctcaagttggacagagtggcacctgggccccaagagcctgagccacttgcctgggacacat-gcgagtgcctg----tcaggacaggattttgagctctg-gtTACAGC-ATCC------------TGCAGAATGTTGGCC-TTCTGACCCTTCCT s panTro5.chr20 66455768 193 + 66533130 ggcttcacgggcatttcctcatttgac-ccccaa--aaacctttgaggggctgctgttatctcaagttggacagagtggcacctgggccccaagagcctgagccacttgcctgggacacat-gcgagtgcctg----tcaggactggattttgagctctg-gtTATAGC-ATCC------------TGCAGAATGTTGGCC-TTCTGACCCTTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62130814 193 + 62195757 ggcttcacgggcatttcctcatttgac-ccccaa--aaacctttgaggggctgctgttatctcaagttggacagagtggcacctgggccccaagagcctgagccacttgcctgggacacat-gcgagtgcctg----tcaggactggattttgagctctg-gtTATAGC-ATCC------------TGCAGAATGTTGGCC-TTCTGACCCTTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 519890 192 - 578057 Ggcttcacgggcatttcctcatttga--ccccaa--aaacctttgaggggctgctgttatctcaagttggacagagtggcacctgggccccaagagcctgagccacttgcctgggacacat-gcgagtgcctg----tcaggactggattttgagctctg-gtTACAGC-ATCC------------TGCAGAATGTTGGCC-TTCTGACCCTTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110041922 194 - 110113093 ggcttcacgggcatttcctcatttgac-ccccaa--aaacctttgaggggctgctgttatctcacgttggaaagagtggcacctgggccccaagagcctgagccacttgcctgggacacat-gcgagtgcctg----tcaggactggaattggagctctgctttacAGC-ATCC------------TGCAGAATGTTGGCC-TTCTGACCCTTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92775942 193 - 92844088 Ggcttcaagggcatttcctcatttgac-ccccaa--agacccgtgaaggactgctgttatctcaagtttgaaagagtggcacctgggccctaggagcctgagccacctgcctgggacacat-gcgagtgcttg----tcaggactggaatttgagctctg-gTTACAGC-AGCC------------TGCAGAATGTTGGCC-TTCTGACCCTTCAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96441998 193 + 96509753 ggcttcaagggcatttcctcatttgac-ccccaa--agacccgtgaaggactgctgttatctcaagtttgaaagagtggcacctgggccctaggagcctgagccacctgcctgggacacat-gcgagtgcttg----tcaggactggaatttgagctctg-gtTACAGC-ATCC------------TGCAGAATGTTGGCC-TTCTGACCCTTCAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913089 193 - 16982598 Ggcttcaagggcatttcctcatttgac-ccccaa--agacccgtgaaggactgctgttatctcaagtttgaaagagtggcacctgggccctaggagcctgagccacctgcctgggacacat-gcgagtgcttg----tcaggactggaatttgagctctg-gttacagc-atcc------------TGCAGAATGTTGGCC-TTCTGACCCTTCAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3715891 193 - 3785965 Ggcttcaagggcatttcctcatttgac-ccccaa--aaacccgtgagggactgctgttatctcaagtttgaaagagtggcacctgggccctaggagcctgagccacctgcctgggacacat-gcgagtgcttg----tcaggactggaatttgagctctg-gttacagc-atcc------------TGCAGAATGTTGGCC-TTCTGACCCTTCAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294110 193 - 90373283 ggcttcaagggcatttcctcatttgac-ccccaa--aaacccgtgagggactgctgttatctcaagtttgaaagagtggcacctgggccctaggagcctgagccacctgcctgggacacat-gcgagtgcctg----tcaggactggaatttgagctctg-gtTACAGC-ATCC------------TGCAGAATGTTGGCC-TTCTGACCCTTCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108406 193 - 179258 Ggcttcaagggcatttcctcatttgac-ccccaa--aaacccgtgagggactgctgttatctcaagtttgaaagagtggcacctgggccctaggagcctgagccacctgcctgggacacat-gcgagtgcttg----tcaggactggaatttgagctctg-gttacagc-atcc------------TGCAGAATGTTGGCC-TTCTGACCCTTCAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584239 184 - 5823884 GGCttcaagggcatttcctcatttgat------------cccgtgagggactgctgttacctcaagtttaaaagagtggcacctgggccctaggagcctgagccacctgcctgggacacat-gcgagtgcttg----tcaggactggaatttgagctctg-gtTACAGC-ATCC------------TGCAGAATGTTGGCC-TTCTGACCCTTCGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 65070 194 + 372756 tgcttcatgggaatttcctcattggaccccccaa--aaacccatgaagggctgctgttatctcaagtttgaaagtgtggcatctgggccccaagagcctgagccacttgcctgggacacat-gtgagtacttg----tcaggactggaatttgagcactg-gtTACAGC-ATCC------------TGCAGAATGTTGGCC-TTCTGCCACTTCAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300520 191 + 16356641 tgcttcatgggtatttcctcattggacccccc-c--aaacccatgaagggctgctgttatctcaagtttgaaggtgtggcatctgggccccaagagcctgagccacttgcctgggacacat-gtgagtacttg----tcaggactggaattGCAG--CTG-GTCACAGC-ACCC------------TGCAGAATGCTGGCC-TTCGGCCCCTCCAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169719 193 + 1231380 tgcttcacgggtatttcctcattggaccccccaa--aaacccatgaagggctgctgttatctcaagtttgaaagtgtggcatctgggccccaagagcctgagccacttgcccgggacacat-gtgagtacttg----tcaggactggaatttgagcGCTT-GTTACAGC-AT-C------------TGCAGAATGTTGGGC-TTCTGCCCCTCCGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2701681 194 + 11732439 tgcctcgcaggccattcctcattggaccccccaa--aaacccaagaagggctgctgttatctcaagtttgaaagtggggcatctgggccccaagagcctgagccacttgcctgggacacat-gtgagtacttg----tcagggctggaatttgagcgctg-gttacagc-atcc------------tgcagaatgttggct-ttctgccactgcat i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22864818 195 + 22939663 CATCCTGTGAGCTTTGCCTTGTTTGCTTGCCCCA--AAGCCTGTTA-GGACCGCTATTATCTTGAGTTTGGGAGTGTGGTGCCTAGGCCCCACGACGCTGAACCACTTGCCTGGGACACACAGTAAGTAC-TA----CCAGGATTGGAATTTTGACTTCT-ATGACAGCTGTCC------------CACAGAGCACCAGCCTTTCTGACCCTTCCT i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 261915 201 - 397369 ggcttgataggtgtttcctcatttcat-ccctaattaagcctgtgagggg-tgctgttatctca-gatgaaagatgtagagcctggcgctgaaga-cttgagcaacttgcccaaca---gt-gcagatatctgaacctctgaaccatgattttaacccca-catgcagc-agcctcactgtccttatgcttgaTGTTGACT-TTTATTTCCT---- i dasNov3.JH569290 I 1601 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622663 1202 + 47698779 I e mm10.chr2 181808293 1440 + 182113224 I e micMur3.chr18 56881191 1858 + 57149010 I a score=1572919.000000 s hg38.chr20_KI270870v1_alt 129869 150 + 183433 GGACCCCTGGCCCCTCCGTGGGAGGGACTA-CGCCCTGCTTAT----CTGTGTCCACAGCTCTGAGCC----------------------TCCATACCCAGCATTCAGTTCGAAGCCTTTATCAAGCACCTGCTGTGGTCAAGGCATCGCACTGGTGGGCGT--GTCGGGCCAGGTGGT s panTro5.chr20 66455961 150 + 66533130 GGACCCCTGGCCCCTCCGTGGGAGGGACTA-CGCCCTGCTTAT----CTGTGTCCACAGCTCTGAGCC----------------------TCCATACCCAGCATTCAGTTCGAAGCCTTTATCAAGCACCTGCTGTGGTCAAGGCATCGCACTGGTGGGCGT--GGCGGGCCAGGTGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131007 150 + 62195757 GGACCCCTGGCCCCTCCGTGGGAGGGACTA-CGCCCTGCTTAT----CTGTGTCCACAGCTCTGAGCC----------------------TCCATACCCAGCATTCAGTTCGAAGCCTTTATCAAGCACCTGCTGTGGTCAAGGCATCGCACTGGTGGGCGT--GGCGGGCCAGGTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520082 150 - 578057 GGACCCCTGGCCCCTCCGTGGGAGGGACTA-CGCCCTGCTTAT----CTGTGTCCACAGCTCTGAGCC----------------------TCCATACCCAGCATCCAGTTCGAAGCCTTTATCAAGTACCTGCTGTGGTCAAGGCATCGCACTGGTGGGCGT--GTCGGGCCAGGTGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110042116 150 - 110113093 GGACCCCTGGCCCCTCCGTGGGAGGGACTG-TACCCTGCTTAC----CTGTGTCCACAGCACTGAGCC----------------------TCCATAGCCAGCCTTCAGTTTGAAGCCTTTATCAAGTACCTGCTGTGGTCAAGGCATCACACTGGTGGGAGT--GTCGGGCCAGGTGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92776135 150 - 92844088 GGACCCCTGGCCCCTCCGTGGGGGGGACTG-TGCCCTGCTTAC----CTGTGTCCACAGCACTGAGCC----------------------TCCATACCCAGCATTCAGTTTGAAGCCTTTATCAAGTACCTGCCATGGTCAAGGCATCGCACTGGTGGGCGT--GTCGGGCCAGGTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96442191 150 + 96509753 GGACCCCTGGCCCCTCCGTGGGGGGGACTG-TGCCCTGCTTAC----CTGTGTCCACAGCACTGAGCC----------------------TCCATACCCAGCATTCAGTTTGAAGCCTTTATCAAGTACCTGCCATGGTCAAGGCATCGCACTGGTGGGCGT--GTCGGGCCAGGTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913282 150 - 16982598 GGACCCCTGGCCCCTCCGTGGGGGGGACTG-TGCCCTGCTTAC----CTGTGTCCACAGCACTGAGCC----------------------TCCATACCCAGCATTCAGTTTGAAGCCTTTATCAAGTACCTGCCATGGTCAAGGCATCGCACTGGTGGGCGT--GTCGGGCCAGGTGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716084 150 - 3785965 GGACCCCTGGCCCCTCCGTAGGGGGGACTG-TGCCCTGCTTAC----CTGTGTCCACAGCACTGAGCC----------------------TCCATACCCAGCATTCAGTTTGAAGCCTTTATCAAGTACCTGCCATGGTCAAGGCATCGCACTGGTGGGCGT--GTCGGCCCAGGTGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294303 150 - 90373283 GGACCCCTGGCCCCTCCGTGGGGGAGACTG-TGCCCTGCTTAC----CTGGGTCCACAGCACTGAGCC----------------------GCCATACCCAGCATTCATTTTGAAGCCTTTATCAAGTACCTGCCATGGTCAAGGCATCGCACTGGTGGGCGT--GTTGGGCCAGGTGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108599 150 - 179258 GGACCCCTGGCCCCTCCGTGGGGGGGACTG-TGCCCTGCTTAC----CTGTGTCCACAGCACTGAGCC----------------------TCCATACCCAGCATTCAGTTTGAAGCCTTTATCAAGTACCTGCCATGGTCAAGGCATCGCACTGGTGGGCGT--GTCGGGCCAGGTGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584423 150 - 5823884 GGACCCCTGGCCCCTCCGTGGGGGGGACTG-TGCCCTGCTTAC----CTGTGTCCATAGCACTGAGCC----------------------TCCATACCCAGCATTCAGTTTGAAGCCTTTATCAAGTACCTGCCATGGTCAAGGCATCGCACGGGTGGGCGT--GTCGGGCCAGGTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 65264 126 + 372756 GGGCCCCAGGCCCCTCTGTGGGAGGGATTG-TGTCCTGCTTAC----CTGTGTCCAGAGCCCTGAGTG----------------------TCCATACCCAGCATTCCGTTTGAAGCTTTTATCAAGTACCCACTGTGGTCA--------------------------AGGCCAGGTGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300711 150 + 16356641 GGGCCCCAGGCCCCTCTGTGGGAGGGATTG-CGCCCTGCTTAC----CTGTGTCCAGAGCCCTGAGCC----------------------TCCATACCCAGCATTCAGTTTGAAGCTTTTATCAAGTACCTGCTGTGGTCAAGGCATCACCCTGGTGGGAAT--GTCAGGCCAGGTGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1169912 149 + 1231380 GGGCCCCAGGCCCCTCTGCGGGAGGTACTG-CGCCCTGCTGAC----CCGCGTCCAGAGCCCTGAGCC-----------------------CCGCACCCAGCACTCAGTCTGACGCTTTTATCAAGTACCTGCTGTGGTCAAGACATCACCCTGGTGGGAAT--GTCGGGCCAGGTGGT i cebCap1.NW_016107870v1 C 0 I 325 s aotNan1.NW_018500483v1 2701875 150 + 11732439 gggccccaggcccctctgTGGGAGGGATTG-CGCCCTGCTTAC----CTGTGTCCAGAGCCCCGAGCC----------------------TCCATACCCAGCATTCAGTTTGAAGCTTTTATCAAGTGCCTGCTGTGGTCAAGGCATCACCCTGGTGGGAAT--GTCGGGCCAGGTGGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22865013 171 + 22939663 GGACCTCTGTCCCCT-TGCAGGAGGCCCTG-TGCTCACTCGCC----CTGCTTCTTTTGCGCTGTGCCTATGTGTAGTGAATGGATGCCCTCCAGACCCAGCATTCAGTTTGAAGCATTTATTAGGTGCCTACTGTGGGCAGGGCATCACATTGTGGGGGGT--GTCAGGCTAGGTGGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181809733 159 + 182113224 GGACCCCTGG--CTTTCAAAGGAAGGGCTGTTGTTCCTCACTC----CAGGTGCCACACCCCTGAGGCTATGGGTAGTTAGAAAATACT-CCCAGGCCTAGAGGTCAGTTAGTGGTGTTTGTTAAGTGTCTGATCTAATCAAGGCATC---CTGTTGTGCA---------CCAGG-GGT i mm10.chr2 I 1440 C 0 s dasNov3.JH569290 262116 138 - 397369 -----GCTGACTCTAAC----TAAAGCTTG-AACCCTGATGGCAGCACTGAGTCCA--------AGGC----------------------TGCACACCTGGCATTGAGCTCACAGCTCTTCCCAAG-AGCAGCTGTGGTCAGAGTGCTGCTCTGGACGGTGGAAGCTGGGCCAGGGAAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622663 1202 + 47698779 I e micMur3.chr18 56881191 1858 + 57149010 I a score=137478.000000 s hg38.chr20_KI270870v1_alt 130019 19 + 183433 TTCGAGGTTACTGCGATTG s panTro5.chr20 66456111 19 + 66533130 TTCGAGGTTACTGCGAGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131157 19 + 62195757 TTCGAGGTTACTACGAGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520232 19 - 578057 TTCGAGGTTACTGCGATTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110042266 19 - 110113093 TTCAAGGTTACTGCAGTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92776285 19 - 92844088 TTCAAGACCACTGCAATGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96442341 19 + 96509753 TTCAAGACCACTGCAATGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913432 19 - 16982598 TTCAAGACCACTGCAATGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716234 19 - 3785965 TTCAAGACCACTGCAATGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294453 19 - 90373283 TTCAAGACCACTGCAATGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108749 19 - 179258 TTCAAGACCACTGCAATGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584573 19 - 5823884 TTCAAGGCCACTGCAATGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 65390 19 + 372756 GTCAAGATCACTGTAGTGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16300861 19 + 16356641 GTCAAGATCACTGTACTTA i saiBol1.JH378156 C 0 I 377 s aotNan1.NW_018500483v1 2702025 19 + 11732439 GTCAAGATCACTGTAGTTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22865184 19 + 22939663 CTCAAGGTCACTGTGATGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181809892 19 + 182113224 CTCAGGCTTACTATGATTA i mm10.chr2 C 0 I 5 s dasNov3.JH569290 262254 17 - 397369 -TGCAGGTC-CTATCATTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622663 1202 + 47698779 I e micMur3.chr18 56881191 1858 + 57149010 I e cebCap1.NW_016107870v1 1170061 325 + 1231380 I a score=115239.000000 s hg38.chr20_KI270870v1_alt 130038 12 + 183433 ------TTGTAATTTGTA------- s panTro5.chr20 66456130 12 + 66533130 ------TCGTAATTTGTA------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131176 12 + 62195757 ------TCGTAATTTGTA------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520251 12 - 578057 ------TCGTAATTTGTA------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110042285 12 - 110113093 ------TCGTAATTTGTG------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92776304 12 - 92844088 ------TCGTAATTTGTA------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96442360 12 + 96509753 ------TCGTAATTTGTA------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913451 12 - 16982598 ------TCGTAATTTGTA------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716253 12 - 3785965 ------TCGTAATTTGTA------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294472 12 - 90373283 ------TCGTAATTTGTA------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108768 12 - 179258 ------TCGTAATTTGTA------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584592 12 - 5823884 ------TTGTAATTTGTA------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 65409 12 + 372756 ------TCGTAAtttgta------- i calJac3.chrUn_GL286459 C 0 I 309 s saiBol1.JH378156 16301257 12 + 16356641 ------TCGTAATTTGTA------- i saiBol1.JH378156 I 377 C 0 s cebCap1.NW_016107870v1 1170386 12 + 1231380 ------TTGTAATTTGTA------- i cebCap1.NW_016107870v1 I 325 C 0 s aotNan1.NW_018500483v1 2702044 12 + 11732439 ------TTGTAAtttgta------- i aotNan1.NW_018500483v1 C 0 I 306 s otoGar3.GL873542 22865203 10 + 22939663 ------CTGTGCTGTG--------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181809916 12 + 182113224 ------AGGCTACTAGTA------- i mm10.chr2 I 5 C 0 s dasNov3.JH569290 262271 25 - 397369 TTTTCATCATAATTCATGGTTTTTA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622663 1202 + 47698779 I e micMur3.chr18 56881191 1858 + 57149010 I a score=952269.000000 s hg38.chr20_KI270870v1_alt 130050 86 + 183433 TGTTATTACCCTCGTTGTGCCAT------------CTCATCTTCATGGCATTTC-GGTAACACTTATTTAGTGCCTACTGTCTATTGAGTGCCATCCCT s panTro5.chr20 66456142 86 + 66533130 TGTTATTACCCTCATTGTGCCAT------------CTCATCTTCATGGCATTTC-GGTAACACTTATTTAGTGCCTACTGTCTATTGAGTGCCATTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131188 86 + 62195757 TGTTATTACCCTCGTTGTGCCAT------------CTCATCTTCATGGCATTTC-GGTAACACTTATTTAGTGCCTACTGTCTATTGAGTGCCATCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520263 86 - 578057 TGTTATTACCCTCGTTGTGCCAT------------CTCATCTTCATGGCATTTC-GGTAACACTTATTTAGTGCCTACTGTCTATTGAGTGCCATCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110042297 81 - 110113093 TGTTATTACCCTCGTTGTGCCAT------------CTC-----CATGGCATTTC-AGTAACACTTATTTAGTGCCTACTGTCTATTGAGTGCCATCCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92776316 86 - 92844088 TATTATTACCCTCGTTGTGCCAT------------CTCATCttcatggcatttc-agtaacacttatttagtgcctactgtctgttgagtgccatccct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96442372 86 + 96509753 TATTATTACCCTCGTTGTGCCAT------------CTCATCttcatggcatttc-agtaacacttatttagtgcctactgtctgttgagtgccatccct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913463 86 - 16982598 TATTATTACCCTCGTTGTGCCAT------------CTCATCttcatggcatttc-agtaacacttatttagtgcctactgtctgttgagtgccatccct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716265 86 - 3785965 TATTATTACCCTCGTTGTGCCAT------------CTCATCttcatggcatttc-agtaacacttacttagtgcctactgtctgttgagtgccatccct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294484 86 - 90373283 TATTATTACCTTCGTTGTGCCAT------------CTCATCttcatggcatttc-agtaacacttatttagtgcctactgtctgttgagtgccatccct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108780 86 - 179258 TATTATTACCCTCGTTGTGCCAT------------CTCATCttcatggcatttc-agtaacacttatttagtgcctactgtctgttgagtgccatccct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584604 86 - 5823884 TATTATTACCCTCGTTGTGCCGT------------CTCATCTTCGTGGCATTTC-AGTAACACTTATTTAGTGCTTACTGTCTATTGAGTGCCATCCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 65730 86 + 372756 TGTTATTACCCTCATTGTTCCAT------------CTCATCTTCAGGACATTTC-AGGAACACTTATTTAGTGCCTGGTGTCTATTGAGTGCCTTCGCT i calJac3.chrUn_GL286459 I 309 C 0 s saiBol1.JH378156 16301269 86 + 16356641 TGTGATTACCCTCACTGTGCCAT------------CTCATCTTCAGGACATTTC-AGGAACACTTATTTAGTGCCTAGTGTCTATTGAGTGCCATCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1170398 86 + 1231380 TGTTATTACCCTCACTGTGCCAT------------CTCATCTTCAGGACATTTC-AAGAACACTTATTTAGTGCCTAGTGTCTATTGAGTGCCATCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2702362 86 + 11732439 TGTTATTACCCTCATTGTGCCAT------------CTCATCTTCAGGACATTTC-AAGAACACTTATTTAGTGCCTAGTGTCTATTGAGTGCCGTCTCT i aotNan1.NW_018500483v1 I 306 C 0 s otoGar3.GL873542 22865213 80 + 22939663 TGTTGTCGCTATGGCTGTG-CAT------------CTTACCTC-----CCCCCT-AGCAGCACTTTCTTAATGCCTGTGGTCTGTTGAGCACTGTCCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181809928 61 + 182113224 TGTTAT-------------CCAA------------CTCAACTTAGAAATACCTC-AGCAAC-CTTATTTAGCACTTCCTGATAGTTGA----------- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 262296 99 - 397369 TATTATTCCTCTTGTTGTGCCATGAGGAGTTGAGCCTCATCTTCACGGTGTTTTAAGGAACATTTTTGTAGTGCGCGGTGTCCACAGAGTCCCGAGCTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e canFam3.chr24 47622663 1202 + 47698779 I e micMur3.chr18 56881191 1858 + 57149010 I a score=1816730.000000 s hg38.chr20_KI270870v1_alt 130136 201 + 183433 GGCTCTGAAGGGAACTGTA--TCCTGATGTTTACGCTG--CGGA------------GTGA--TGT-GGCGGAGG--------------GAGGCCAGGGAGGGTGTCAGGAG-CCTGCCACACTGGGCAGCACCAGG---CCTCATTTCTAGG------------------------GCAACGCAGGAC------CTCTGGCTGAAGCAGGGGAGGGAT-------CCAGCCCCTCAGGGGTGTTGTCTTCTGTGTTTTGCTGGGGGGAGTTAAGT s panTro5.chr20 66456228 201 + 66533130 GGCTCTGAAGGGAACTGTA--TCCTGATGTTTACGCTG--CGGA------------GTGA--CGT-GGCGGAGG--------------GAGGCCAGGGAGGGTGTCAGGAG-CCTGCCACGCTGGGCAGCACCAGG---CCTCATTTGTAGG------------------------GCAACGCAGGAC------CTCTGGCTGAAGCAGGGGAGGGAT-------CCAGCCCCTCAGGGGTGTTGTCTTCTGTGTTTTGCTGGGGGGAGTTAAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131274 201 + 62195757 GGCTCTGAAGGGAACTGTA--TCCTGATGTTTACGCTG--TGGA------------GTGA--CGT-GGCGGAGG--------------GAGGCCAGGGAGGGTGTCAGGAG-CCTGCCACGCTGGGCAGCACCAGG---CCTCATTTGTAGG------------------------GCAACGCAGGAC------CTCTGGCTGAAGCAGGGGAGGGAT-------CCAGCCCCTCAGGGGTGTTGTCTTCTGTGTTTTGCTGGGGGGAGTTAAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520349 200 - 578057 GGCTCTGAAGGGAACTGTA--TCCTGATGTTTACGCTG--CGGA------------GTGA--CGT-GGCGGAGG--------------GAGGCCAGGGAGGGTGTCAGGAG-CCTGCCACACTGGGCAGCACCAGA---CCTCATTTCTAGG------------------------GCAACGCAGGAC------CTCTGGCTGAAGCAGGGGAGGGAT-------CCAGCCCCTCAGGGGTGTTGTCTTCTGTGTTTTGCT-GGGGGAGTTAAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110042378 218 - 110113093 GGCTCTGAAGGGAACTGTA--TCCTGATGTTTACCCTG--CGGA------------GTGA--CGT-GGCAGAGGGGACCCACACACCTGAGGCCAGGGAGGGTGTCAGGAG-CCTGCCACACTGGGCAGCACCAGGCCTCCTCATTTCTAGG------------------------GCAACTCAGGAG------CTCTGGCTGAAGCAGGGGAGGGAT-------CCAGCCCCTCAGGGGTGTCGTCTTCTGTGTTTTGCTGGGGGGAGTTAAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92776402 213 - 92844088 ggctctgaaggg-acagta--TCCTGATGTTTACACTG--TGGA------------GTGA--CGT-GGTGGAGGAGACCCACGCACCTGAGGCCAGGGAGGGTGTCAGGAG--CCGCCACACTGGGCAGCACCAGGCCTTCTAATTTCTGGG------------------------GCAACCCAGGAG------CTCTGGCTGAAGTGGGGGAGGGAT-------CCGGCCCCTTGGGCGTGTTGTCTTCTGTGTTT-GCT--GGGGAGTTAAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96442458 213 + 96509753 ggctctgaaggg-acagta--TCCTGATGTTTACACTG--TGGA------------GTGA--CGT-GGTGGAGGAGACCCACGCACCTGAGGCCAGGGAGGGTGTCAGGAG--CTGCCACACTGGGCAGCACCAGGCCTTCTAATTTCTGGG------------------------GCAACCCAGGAG------CTCTGGCTGAAGTGGGGGAGGGAT-------CCGGCCCCTTGGGCGTGTTGTCTTCTGTGTTT-GCT--GGGGAGTTAAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913549 213 - 16982598 ggctctgaaggg-acagta--TCCTGATGTTTACGCTG--TGGA------------GTGA--CGT-GGTGGAGGAGACCCACGCACCTGAGGCCAGGGAGGGTGTCAGGAG--CTGCCACACTGGGCAGCACCAGGCCTTCTAATTTCTGGG------------------------GCAACCCAGGAG------CTCTGGCTGAAGTGGGGGAGGGAT-------CCGGCCCCTTGGGCGCGTTGTCTTCTGTGTTT-GCT--GGGGAGTTAAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716351 214 - 3785965 ggctctgaaggg-acagTA--TCCTGATGTTTACACCG--TGGA------------GTGA--CGT-GGTGGAAGGGACCCACGCACCTGAGGCCAGGGAGGGTGTCAGGAG--CTGCCACACTGGGCAGCACCAGGCCTTCTCATTTCTGGG------------------------GCAACCCAGGAG------CTCTGGCTGAGGTGGGGGAGGGAT-------CCGGCCCCTCGGGCGTGCTGTCTTCTGTGTTTCGCT--GGGGAGTTAAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294570 214 - 90373283 ggctctgaaggg-acagta--TCCTGATGTTTACACTG--TGGA------------GTGA--CGT-GGTGGAGGGGACCCACACACCTGAGGCCAGGGAGGGTGTCAGGAG--CTGCCACACTGGGCAGCACCAGGCCTTCTAATTTCTAGG------------------------GCAACCCAGGAG------CTCTGGCTGAAGTGGGGGAGGGAT-------CCGGCCCCTCGGACGTGTTGTCTTCTGTGTTTTGCT--GGGGAGTTAAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 108866 214 - 179258 ggctctgaaggg-acagta--TCCTGATGTTTACACTG--TGGA------------GTGA--CGT-GGTGGAAGGGACCCACGCACCTGAGGCCAGGGAGGGTGTCAGGAG--CTGCCACACTGGGCAGCACCAGGCCTTCTCATTTCTGGG------------------------GCAACCCAGGAG------CTCTGGCTGAGGTGGGGGAGGGAT-------CCGGCCCCTCGGGCGTGCTGTCTTCTGTGTTTCGCT--GGGGAGTCAAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584690 215 - 5823884 GGCTCTGAAGGG-ACAGTA--TCCTGATGTTTACACTG--TGGA------------GTGA--CGT-GGTGGAGGGGACCCACACACCTGAGGCCAGGGAGGGTGTCAGGAG-CCTGCCACACTGGGCAGCACCAGGACTTCTCATTTTTAGG------------------------GCAAGCCAGGAG------CTCTGGCTGAAGTGGGGGAGGGAT-------CCGGCCCCTCGGGGGTGTTGTCTTGTGTGTTTTGCT--GGGGAGTTAAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 65816 206 + 372756 TGCTCTGAAGGGAACTGTA--TACTGATGTTTACACTG--TGGA------------GTGA--CAT-GGTGGCGG-GACCCACATACCTGAGGCCAAGGAAGGTGTCAGGAG-CCTGCCACACTGGGCAGCACCAGGCCTCCTCGTTTCTAGG------------------------GTGGCTCAGGAG------CTCTGGCTGAAGT-GGGGAGGAGT-------CCAGCCCCTCAGGGTTGTCA----------TTTGCTGGGGGGAGTTATGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16301355 217 + 16356641 GGCTCTGAAGGGAATGGTG--TGCTGATGTTTACACTA--TGGA------------GTGA--CAT-GGTGGCGG-GACCCACATGCCTGAGGCCAAAGAGGGTGTCAGGAG-CCTGCCACACTGGGCAGCCCCAGGCCTCCTCGTTTCTAGG------------------------GTGGCTCAGGAG------CTCTGGCTGAAGTCGGGGAGGAAT-------CCAGCCCCTCAGGGTTGTTGTCTTCTGTGTTTTGCTGGGGGAAGTTATGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1170484 217 + 1231380 GGCTCTGAAGGGAACTGTA--TGCTGATGTTTACACTA--TGGA------------GTGA--CAT-GGTGGCGG-GACCCACATGCCTGAGGCCGAGGAGGGTGTCAGGAG-CCTGCCACCCTGGGCGGCACCAGGTCTCCCCGTTTCTAGG------------------------GCGGCTCAGGAG------TTCTGGCTGAAGTGGGGGAGGAAT-------CCAGCCCCCCAGGGTTGTTGTCTTCTGTGTTTTGCTGGGGGGAGTTACGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2702448 217 + 11732439 GGCTCTGAAGGAGACTGTA--TGCTGATGTTTACACTG--TGGA------------GTGA--CAT-GGTGGCGG-GACCCACATACCCGAGGCCAAGGCGGGTGTCAGGAG-CCTGCCACACTGGGCAGCACCAGGCCTCCTCATTTCTAGG------------------------GTGGCTCAGGAG------CTCTGGCTGAAGTCGGGGAGGAAT-------CCAGCCCCTCAGGGCTGTTGTCTTCTGTGTTTTGCTGGGGGGAGTTACGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22865293 182 + 22939663 GGCTGTGAAAGGAGCTGGC--TCCTTGTGTTTACTTGG--TGGG------------GTGGTCCAA-GCTGTAAG-----------------------------GTCATTAATCCTGCTGTGCTGAGCCCAGTCAGGCTTCCTTGTTTTGGGG------------------------GCAGCTCAGGGG------GTCTGGCTGAAGT-GTGGAGGAAC-------CCAG-CCCTCAGG--TGTTG-CCCCTGTGTCCTGTT-----GTGTCAAGT i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181809989 117 + 182113224 -GCCCTAAAGAGTACTGCA--CCTGGGTGTCCAAATTACCTGTG------------GTAA--TTT-GATGGAGG--------------TGGGCCAAGG---------------CTG--------------------------------------------------------------------AGTG------CCCTGGCT-------------------------------TTCATAGTATGGTCTTCTGTCTTG------GGGTTGCTAGGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47623865 166 + 47698779 GGCACTGGAGGG-GCTGCACTTCGTGTGGCTTCCTGTG--TGTAGGAGGTGGCCCCGGGG--CGTCGGTGGAGGTGACCTGCACGCCCGGGGCCACGGGAGG---CAGCGG-CCTG-------------------GCCTCCTC-------------------------------------------CA------CCTGGGCCGAGGTCGGGGAGCACG-------CTAGCCCCGCGGGGGTGCTGTTCTC------------------------- i canFam3.chr24 I 1202 C 0 s dasNov3.JH569290 262395 199 - 397369 GGCTCAGAGGAA-GCTGCG----------TTTGCCTTG--TTTA------------GAAG--TGC-------------------ACCCCAGGC---------TGACAGGGC---------------CAGCCCTAGGCTTTCTCATTTCTGGGCTGGCCACCTTCTCTGTCCAGGCAGTAGGCCAGGAATGCAGCCTCTGGCTG--GTAGGGTGGGAATGGGTGTCCCAGCACTGTGGAGGCCTTGTCTCCTGTGTTT---TTGGGGGAGTCAGC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1875981 1936 - 2029793 I e micMur3.chr18 56881191 1858 + 57149010 I a score=96766.000000 s hg38.chr20_KI270870v1_alt 130337 7 + 183433 CTTCCTC s panTro5.chr20 66456429 7 + 66533130 CTTCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131475 7 + 62195757 CTTCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520549 6 - 578057 CTTCCT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110042596 7 - 110113093 CTTCTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92776615 7 - 92844088 CTTCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96442671 7 + 96509753 CTTCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913762 7 - 16982598 CTTCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716565 7 - 3785965 CTTCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294784 7 - 90373283 CTTCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109080 7 - 179258 CTTCCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584905 7 - 5823884 CTTCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66022 7 + 372756 CTTCTTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16301572 7 + 16356641 CTTCTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1170701 7 + 1231380 CTTCTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2702665 7 + 11732439 CTTCTTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1877917 7 - 2029793 CTTCCTT i proCoq1.NW_012150197v1 I 1936 C 0 s otoGar3.GL873542 22865478 7 + 22939663 CTTCCTT i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181810106 7 + 182113224 CTTTCTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47624031 3 + 47698779 ----CTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 262594 7 - 397369 CCTCCTA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56881191 1858 + 57149010 I a score=130487.000000 s hg38.chr20_KI270870v1_alt 130344 8 + 183433 CCTTATCC s panTro5.chr20 66456436 8 + 66533130 CCTTATCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131482 8 + 62195757 CCTTATCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520555 8 - 578057 CCTTATCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110042603 8 - 110113093 CCTTATCC i nomLeu3.chr13 C 0 I 315 s rheMac8.chr10 92776622 8 - 92844088 CCTTATCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96442678 8 + 96509753 CCTTATCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913769 8 - 16982598 CCTTATCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716572 8 - 3785965 CCTTATCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294791 8 - 90373283 CTTTATCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109087 8 - 179258 CCTTATCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584912 8 - 5823884 CCTTATCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66029 8 + 372756 CCTTATCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16301579 8 + 16356641 CCTTGTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1170708 8 + 1231380 CCTTATCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2702672 8 + 11732439 TCTTATCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56883049 8 + 57149010 CCTTGTCC i micMur3.chr18 I 1858 C 0 s proCoq1.NW_012150197v1 1877924 8 - 2029793 CCTTGTCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22865485 8 + 22939663 CCTTGCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181810113 8 + 182113224 CCTCTTTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47624034 8 + 47698779 CGTTGTCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 262601 8 - 397369 CATGGTCA i dasNov3.JH569290 C 0 C 0 a score=6479755.000000 s hg38.chr20_KI270870v1_alt 130352 382 + 183433 AGAAGATAGGAGACTCCGGGAGATGCTTCTGTGGACACTGTCCTGAAGGGTCCCTCTCCCTCG--CCCACTGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACATCTTC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-CCTG-TTTGGCTGGCA---CAGCTCCTAGGGG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCTGGTC--CCAACCCATGACGACCGGGTCTGCTC s panTro5.chr20 66456444 382 + 66533130 AGAAGATAGGAGACTCCGGGAGATGCTTCTGTGGACACTGTCCTGAAGGGTCCCTCTCCCTCG--CCCACTGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-CCTG-TTTGGCTGGCA---CAGCTCCTAGGGG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCTGGTC--CCAACCCATGACGACCGGGTCTGCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131490 382 + 62195757 AGAAGATAGGAGACTCCGGGAGATGCTTCTGTGGACACTGTCCTGAAGGGTCCCTCTCCCTCG--CCCACTGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-CCTG-TTTGGCTGGCA---CAGCTCCTAGGGG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCTGGTC--CCAACCCATGACGACCGGGTCTGCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520563 382 - 578057 AGAAGATAGGAGACTCCGGGAGATGCTTCTGTGGACACTGTCCTGAAGGGTCCCTCTCCCTCG--CCCACTGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-CCTG-TTTGGCTGGCA---CAGCTCCTAGGAG-ACC-----CTCCGTGGCCTGGGGAGGAACAGGC-----CCTGGTC--CCAACCCATGATGACCGGGTCTGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110042926 382 - 110113093 agaagaTAGGAGACTCCGGGAGATGCTTCTGTGGACACTGTCCCGAAGGGTCCCTCTCCCTCG--CCCACTGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-CCTG-TTCGGCTGGCA---CAGCTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAATAGGC-----CCTGGTC--CCAACCCATGACGACCGGGTCTGCTC i nomLeu3.chr13 I 315 C 0 s rheMac8.chr10 92776630 367 - 92844088 AGAAGACAGGAGACTCCAGG---------------CACTGTCCTGAA-GGTTCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACGTCTCC---------CTGCTGGTCTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTGAGTC-CCTGCTTTGGCTGGCA---CAGCTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCCGGTC--CTGACCCGTGACGAGTGGGTCTGTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96442686 367 + 96509753 AGAAGACAGGAGACTCCAGG---------------CACTGTCCTGAA-GGTTCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACGTCTCC---------CTGCTGGTCTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTGAGTC-CCTGCTTTGGCTGGCA---CAGCTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCCGGTC--CTGACCCGTGACGAGTGGGTCTGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16913777 367 - 16982598 AGAAGACAGGAGACTCCAGG---------------CACTGTCCTGAA-GGTTCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACGTCTCC---------CTGCTGGTCTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTGAGTC-CCTGCTTTGGCTGGCA---CAGCTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCCGGTC--CTGACCCGTGACGAGTGGGTCTGTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716580 367 - 3785965 AGAAGACGGGAGACTCCAGG---------------CACTGTCCTGAA-GGTTCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACATCTTC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTGAGTC-CCTGCTTTGGCCGGCA---CAGCTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCCGGTC--CTGACCCATGACGAGTGGGTCTGCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90294799 368 - 90373283 AGAAGACAGGAGACTCCAGG---------------CACTGTCCTGAAGGGTTCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTGAGTC-CCTGCTTTGGCTGGCA---CAGCTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCCGGTC--CTGACCCATGACGAGTGGGTCTGCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109095 367 - 179258 AGAAGACGGGAGACTCCAGG---------------CACTGTCCTGAA-GGTTCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACGTCTCC---------CTGCTGGTTTTTTTCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAGGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGTTGCTCACGTGAGTC-CCTGCTTTGGCCGGCA---CAGCTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCCGGCC--CTGACCCATGACGAGTGGGTCTGCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5584920 368 - 5823884 AGAAGACAGGAGACTCCAGG---------------CACTGTCCTGAAGGGTTCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGACCTCCCCGCCAGCCGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTGAGTC-CCTGCTTTGGCTGGCA---CAGCTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCCAGTC--CCGACCCGTGATGAGGGGGTCTGCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66037 382 + 372756 AGAAGACAGGAGACTCCGGGAAATGCTTCTGTGGACACTGCCCTGAAGGGTCCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGGCCTCCCCGCCAGCTGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCAGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-TCTGCTTTGGCTGACA---CAACTCCTAGG-G-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCTGGTC--CCAACCCATGGCGGCCAGGTCTGCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16301587 383 + 16356641 ACAAGACAGGAGACTCCGGGAAATGCTTCTGTGGACACTGCCCTGAAGGGTCCCTCTCCCTCG--CCCACCGGCTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGCCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-TCTGCTTTGGCTGACA---CAACTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCTGGTC--CCAACCCATGGCGGCCAGGTCTGCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1170716 367 + 1231380 AGAAGACAGGAGACTCCGGGAAATGCTTCTGTGGACA---CCCTGAAGGGTCCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGGCCTCCCCGCCAGCCGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-TCTGCTTTGGCTGACA---CAACTCCTAGGAG-ACC-----CTCTGTGACCTGGGGAGGAACAGGC-----CCTGGTC--CCAACCCATGGTG------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2702680 383 + 11732439 AGAAGACAGGAGACTCCAGGAAGTGCTTCTGTGTAGGCTGCCCTGAAGGGTCCCTCTCCCTCG--CCCACCGGGTTGGGCGCCCAGGCCTCCCCGCCAGCTGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-TCTGCTTTGGCTGAGA---CGACTCCTAGGAG-ACC-----CTCTGTGGCCTGGGGAGGAACAGGC-----CCTGGTC--CCAACCCATGGTGGCAGGGTCTGCTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56883057 385 + 57149010 AGAAGACAAGAGACTCCGGGAAGCGCCTCTGTTGTCACTCTCCTGAAGGGTCCCTCGCCCTTG--CCCACCGGGTTGGGAGCCCGGGCTTCCCCGCCAGCCGGTTAAAACGTCTCC---------CTGCTGGTCTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTCGAGGAGCGGAAGTACCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAAGAGCTGCTCACGTAAGTC-CCTGCCTGGGCCAGCAGCTCAGCTCCTAGGAG-AAC-----TTCTATCACCTGGGAAGGAGCAGG------CCTGGTC--CTAGCCCATGATGACCAGGTCTGCTC i micMur3.chr18 C 0 I 87 s proCoq1.NW_012150197v1 1877932 382 - 2029793 AGAAGACGGGAGGTTCCAGGAAATGCCT-TGTTGTCACTCTCCTGAAGGGTCCCTCTCCCTTG--CCCACCGGGTTGGGAGCCCGGGCTTCCCCGCCAGCTGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTACCCGGGGGAAGTCACCCTGACCAACTTTAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAAGAGCTGCTCACGTAAGTC-CCCGTCTGGGCCAGCA---CAACTCCCAGGAG-ACT-----TTCCATCATCTGGGAAGGAGCAGAC-----CCTGGTC--CCAACCCGTGATGACCAGGTCTGCTC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22865493 381 + 22939663 AGAAGACAGGAGACTCCATGAAATGCCT-TTGTGCCACTGTTCTGAAGGGTCCCTCCGCCTTG--CCCACCGGGTTGGGAGCCCGGGCTTTCCCGCCAGCTGGTTAAAACATCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAGTTTTGAGGAGCGGAAGTACCCGGGGGAAGTCACCCTGACCAACTTTAAGTTGAAGTTTCTCTCCAAGGACATAAAGAAAGAGCTGCTCACGTAAGTC-CCTGTCTGTGCTGGTG---TAGTTCCTAGGAG-ACC-----CTCTGTTATCTGGGAAAGGACAGG--------TGCTCAGCTAACCCATGATGACCAGGTCAGCTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181810121 339 + 182113224 ATAAGGTAAAATATCTTGTGAG-------------TACTA--CTAAAGGGTCCCTCTTTGTTT--CCCACTAGGTTGGACATCT-GACTTCTTTGCCAGTT-GTTAAAACATTCCCTGTTTTGTTTTGTTTTCTTTCTTCAGTCAGAGCCAGCAGCACACTCTTTTGCTTCTTCTGAAGCAGATGATCAGGAGGTGTCAGAAGAGAACTTTGAGGAGCGGAAGTATCCAGGGGAAGTCACCCTAACCAACTTTAAGCTGAAGTTTCTTTCCAAGGACATAAAGAAGGAACTTCTCACGTAAGT--GATGCCTTGACAGACG---GGCTTCCCAGGGA-A-------------------------AGCAGA------CCTGGTC--CTAGAACCCAAC-------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47624042 387 + 47698779 TGGAGGCAGGACACTCCAGAAACCACCTCTGTGAACCCTGCTCTCAAGGGTCCCTCTCCCTCA--GCC-CCGGGTCGGGCACCCGG--CCCCCCGCCAGCCGGTTAAAACGTCTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAGTTTTGAGGAGCGGAAGTACCCCGGGGAAGTTACCCTGACCAACTTTAAGATGAAGTTCCTCTCCAAGGACATAAAGAAGGAGCTGCTCACGTAAGTC-CCCG-CCGGGCCAGGA---GAACCCT--GGAG-TCTGCCCGCTCTGAGCCTGGGGGCCGGGCCTGCTCCGTCCTGGGC--CCTGTCCCCCCAGCCTGGCTCTGCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 262609 379 - 397369 AGAAAATGGGACACTCCAGAAGATGCCTCTTTGGAGATGGTCCTGAG-GTTTCCTCTGCCTTGGCCCCACCGGGTTA-----CCA--CCTCCCCGCCAGCCAGTTAAAACATGTCC---------CTGCTGGTTTTTTGCAGTCAGAGCCAGCAGCCCATTCTTTTGCTTCTTCTGAAGCAGATGACCAGGAAGTGTCGGAAGAGAATTTTGAGGAGCGGAAGTATCCTGGGGAAGTCACCCTAACCAACTTCAAGCTGAAGTTTCTCTCCAAGGACATAAAGAAGGAGCTGCTTACGTAAGTTGCCCTCCTCAGCCAATA---GGACTTCTTGGAGCAGC-----TTCTACAATGTAGAAAGGAGTACAC-----CCTTATC--TCAACCTGCACCTATCAGATCTGCTC i dasNov3.JH569290 C 0 I 5 a score=26051.000000 s hg38.chr20_KI270870v1_alt 130734 2 + 183433 AG s panTro5.chr20 66456826 2 + 66533130 AG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131872 2 + 62195757 AG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520945 2 - 578057 AG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110043308 2 - 110113093 AG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92776997 2 - 92844088 AG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443053 2 + 96509753 AG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914144 2 - 16982598 AG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716947 2 - 3785965 AG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295167 2 - 90373283 AG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109462 2 - 179258 AG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585288 2 - 5823884 AG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66419 2 + 372756 AG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16301970 2 + 16356641 AG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171083 1 + 1231380 -G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703063 2 + 11732439 AA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1878314 2 - 2029793 AG i proCoq1.NW_012150197v1 C 0 I 192 s otoGar3.GL873542 22865874 2 + 22939663 AG i otoGar3.GL873542 C 0 I 6 s dasNov3.JH569290 262993 2 - 397369 GG i dasNov3.JH569290 I 5 C 0 e canFam3.chr24 47624429 0 + 47698779 C e mm10.chr2 181810460 0 + 182113224 C e micMur3.chr18 56883442 87 + 57149010 I a score=908289.000000 s hg38.chr20_KI270870v1_alt 130736 91 + 183433 GCTTTCCCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTCGAGCCAGGCAGCCTGTGACAGGAGCCAGGGTATTCAGAGGTTTCCCAACACCTTTGTGTTGTG s panTro5.chr20 66456828 91 + 66533130 GCTTTCCCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTCGAGCCAGGCAGCCTGTGACAGGAGCCAGGGTATTCAGAGGTTTCCCAACACCTTTGTGTTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131874 91 + 62195757 GCTTTCCCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTCGAGCCAGGCAGCCTGTGACAGGAGCCAGGGTATTCAGAGGTTTCCCAACACCTTTGTGTTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 520947 91 - 578057 GCTTTCCCC--------GACC--------------------------TG---TCCTG-------ATCAC-----------CTCGAGCCAGGCAGCCTGTGACAGGAGCCAGGGTATTCAGAGGTTTCCCAACACCTTCGTGTTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110043310 91 - 110113093 GCTTCCCCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTCGAGCCAGGCAGCCTGCGACAGGAGCCAGAGTATTCAGAGGTTTCCCAACACCTTTGCGTTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92776999 91 - 92844088 GCTTCCTCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTTGATCCGGGCAGCCTGCGACAGGAACCAGAGCAGTCAGAGGTTTCCCAACACCTCTGCGCCGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443055 91 + 96509753 GCTTCCTCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTTGATCCGGGCAGCCTGCGACAGGAACCAGAGCAGTCAGAGGTTTCCCAACACCTCTGCGCCGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914146 91 - 16982598 GCTTCCTCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTTGATCCGGGCAGCCTGCGACAGGAACCAGAGCAGTCAGAGGTTTCCCAACACCTCTGCGCCGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3716949 91 - 3785965 GCTTCCTCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTTGATCCGGGCAGCCTGCGACAGGAACCGGAGCAGTCAGAGGTTTCCCAGCACCTCTGCGCTGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295169 91 - 90373283 GCTTCCTCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTTGATCCGGGCAGCCTGCGACAGGAGCCAGAGCAGTCCGAGGTTTCCCAACACCTCTGCGCTGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109464 91 - 179258 GCTTCCTCC--------GACC--------------------------TG---TCCCG-------ACCAC-----------CTTGATCCGGGCAGCCTGCGACAGGAGCCAGAGCAGTCAGAGGTTTCCCAACACCTGTGCGCTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585290 91 - 5823884 GCTTCCTCC--------GACC--------------------------TG---TCCTG-------ACCAC-----------CTTGATCCGGGCGGCCTGCGACAGGAGCCAGAGCAGTCAGAGGTTTCCCAACACCTTTGCGTTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66421 91 + 372756 CCTTCCCCC--------AACA--------------------------TG---TCCTG-------ACCAC-----------CCTGAGCCAGGCAGCCTGCGACAGGAGCCAGGGGAGTCAGAGGCTTCCCAACACCTTTGCTCTGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16301972 91 + 16356641 CCTTCCCCC--------GACA--------------------------CG---TCCTG-------ACCAC-----------CCTGAGCCAGGCAGCCTGCGACAGGAGCCAGGGCAGTCAGAGGCTTCCCAACACCTTTGCTCTGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171084 91 + 1231380 CCTTCCCCC--------GACA--------------------------TG---TCCTG-------ACCAC-----------CCTGAGCCGGGCAGCCTGCGACAGGAGCCAGGGCAGTCAGAGGCTTCCCAACACCTTTGCTCTGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703065 91 + 11732439 CCTTCCCCC--------GACA--------------------------CG---TCCTG-------ACCAC-----------CCTGAGCCAGGCAGCCTGCGACAGGAGCCAGGGGAGTCGGAGGCTTCCCAACACCTTTGCTCTGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22865882 80 + 22939663 CCTTTCCCT--------GCTT--------------------------TG---TCCTG-------ATCTC-----------CTGGAGCCAGGCAACTCACCACAGGTGAC-----------AGGTTTCTTGTCATTTCTGTGCCACA i otoGar3.GL873542 I 6 C 0 s mm10.chr2 181810460 57 + 182113224 --------------------------------------------------------A-------ACTAC-----------CTAGATCCAGGTAGCTCAC---------------AGTGATGAGTTTTCTTTCAGCTTTGCACTGAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47624429 90 + 47698779 -CTTCTCCC--------GGCCGCACCGCTTGCCGGGCAGACGTCGGACG---TCCTGTACCACAACCCC-----------CTTGAGCCAGGCGACGGCTGACAGGG-----------------------------TTTGCGC---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 262995 104 - 397369 GCTTTCCACTCACCCAGGCCC--------------------------TGGGACTCTG-------ACCACCCTCCAGCCCTCCTGAGCTGGGCAGCAGGTGGCAGGTGAAAG---------AGGTTCCTCAGCACCTCTTCCCTGCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1878316 192 - 2029793 I e micMur3.chr18 56883442 87 + 57149010 I a score=1191252.000000 s hg38.chr20_KI270870v1_alt 130827 108 + 183433 CTGGGCTTTACTGCAATCTTCTAAAAGTGATTA-AGAACAAAGAAATCCCC-TGGCCAAGCTCACCAagcaggacagagcagggcagg---ggcagagtggaggagagcTCCT s panTro5.chr20 66456919 108 + 66533130 CTGGGCTTTACTGCAATCTTCTAAAAGTGATTA-AAAACAAAGAAATCCCC-TGGCCAAGCTCACCAagcaggacagagcagggcagg---ggcagagtggaggagagcTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62131965 108 + 62195757 CTGGGCTTTACTGCAATCTTCTAAAAGTGATTA-AAAACAAAGAAATCCCC-TGGCCAAGCTCACCAagcaggacagagcagggcagg---ggcagagtggaggagagcTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521038 108 - 578057 CTGGGCTTTACTGCAATCTTCTAAAAGTGATTA-AGAACAAAGAAATCCCC-TGGCCAAGCTCACCAAGCAGGACAGAGCAGGGCAGG---GGCAGAGTGGAGGAGAGCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110043401 107 - 110113093 CTGGGCTTTACTGCAATCTTCTAAAAGTGATTA-AGAACAAAGAAATCCCT-TGGCCAAGCTCACCAAGCAGGACAGAGCAGGGCAGG---GGGAGAGTGGAGGAGAGCTCC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777090 108 - 92844088 GTTGGCTTTTCTGCTATCTTCTAAAAGTGATTA-AGAACAAGGAAATTCCC-TGGCCAAGCTCACCAagcaggacagagcagagcagg---ggcagagtggaggagagTTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443146 108 + 96509753 GTTGGCTTTTCTGCAATCTTCTAAAAGTGATTA-AGAACAAGGAAATTCCC-TGGCCAAGCTCACCAagcaggacagagcagagcagg---ggcagagTGAAGGAGAGTTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914237 108 - 16982598 GTTGGCTTTTCTGCAATCTTCTAAAAGTGATTA-AGAACAAGGAAATTCCC-TGGCCAAGCTCACCAagcaggacagagcagagcagg---ggcagagtggaggagagTTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717040 108 - 3785965 GTTGGCTTTTCTGCAATCTTCTAAAAGTGATTA-AGAACAAAGAAATTCCC-TGGCCAAGCTCACCAagcaggacagagcagagcagg---ggcagagtggaggagagTTCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295260 108 - 90373283 GTTGGCTTTTCTGCAATCTTCTAAAAGTGATTA-AGAACAAAGAAATTCCC-TGGCCAAGCTCACCAagcaggacagagcagagcagg---ggcagagtggaggagagTTCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109555 108 - 179258 GTTGGCTTTTCTGCAATCTTCGAAAAGTGATTA-AGAACAAAGAAATTCCC-TGGCCAAGCTCACCAagcaggacagagcagagcagg---ggcagagtggaggagagTTCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585381 108 - 5823884 GTTGGCTTTACTGCAATCTTCTAAAAGTGATTA-AGAACAAAGAAATTCCC-TGGCCAAGCTTACCAagcaggacagagcagagcagg---gacagagtggaggagagTTCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66512 106 + 372756 CTGGGCTTTACTGCAATCTTCTAAAAGTGATTA-AGAACAAAGAAATGCCC-TGGCCAAGCTCACCAAGCAGGACAGAGCAGAGCAGG---GAGAGAGCGGAG--GAGTTCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302063 106 + 16356641 CTGGGCTTTACTGCAATCTTCTAAAAGTGATTA-AGAGCAAAGAAATCCCC-TGGCCAAGCTCACCAAGCAGGACAGAGCAGAGCAGG---GAGAGAGTGGAA--GAGTTTAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171175 106 + 1231380 CTAGGCTTTACTGCAATCTTCTAAAAGTGATTA-AGAACAAAGAAATCCCC-TGGCCAAGCACACCGAGCAGGACAGAACAGAGCAGG---GAGAGGGTGGAG--AAGTTCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703156 103 + 11732439 CCGGGCTTTACTGCAATCTTCTAAAAGTGATTA-AGAACAAAGAAATCCCC-TGGCCAAGCTCACCAAGCAGGACAGAGCAGAGCAGG---GAGAGAGTGG-----AGTTCAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56883529 108 + 57149010 CTGGGCTTTAACACAATCCTCTAAAAGTAATTA-AGAAAAGGAAGAGCCCC-TGGCCCAGTTTACAAATCAGCAcagagcaaagcagg---aggagagtggaggagaggtgag i micMur3.chr18 I 87 C 0 s otoGar3.GL873542 22865962 108 + 22939663 CTGGACTTTAACATGATTCTCTAAAAGTGACCA-AGAGTAGGAAGAGCCCCTTAGCCCAGCTCATACACCAGGACAAAGCAGAATAGG----TAAGAGCTGAGGAGAAATGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181810517 69 + 182113224 --------------------------CTGGATA-TGAACA------------TGATCCAGCCCACAATCTAGAACAGATCAGGGCAAGATGGATATTGTAGTCGTGGG----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47624519 79 + 47698779 CCGGAATCTGACCCAAGCTCCCG---CTGCTCAGGGAGCGAGGGAAGCCCC-TGCCCAGGCCCAC-----------GGGCGGGGCGGG---CGCGGA---------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 263099 98 - 397369 CTAAATTCTGACAGCATGCACTGGAAGTGATTA-TGTGCAAGACAAAGCTC-CAGCCCAGC-CATACAGCAGGAC---------CAGG---GTGGAGGCTGTGGAGAGTTCCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1878316 192 - 2029793 I a score=106509.000000 s hg38.chr20_KI270870v1_alt 130935 6 + 183433 CAGAGA s panTro5.chr20 66457027 6 + 66533130 CAGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132073 6 + 62195757 CAGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521146 6 - 578057 CAGAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110043508 6 - 110113093 CAGAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777198 6 - 92844088 CAGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443254 6 + 96509753 CAGAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914345 6 - 16982598 CAGAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717148 6 - 3785965 CAGAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295368 6 - 90373283 CAGAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109663 6 - 179258 CAGAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585489 6 - 5823884 CAGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66618 6 + 372756 CAGAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302169 6 + 16356641 CAGAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171281 6 + 1231380 CAGAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703259 6 + 11732439 CAGAAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56883637 6 + 57149010 cagagA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1878508 6 - 2029793 CAGAGA i proCoq1.NW_012150197v1 I 192 C 0 s otoGar3.GL873542 22866070 6 + 22939663 CAGAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181810586 6 + 182113224 CAGAGA i mm10.chr2 C 0 C 0 s dasNov3.JH569290 263197 6 - 397369 CGGTGA i dasNov3.JH569290 C 0 I 607 e canFam3.chr24 47624598 0 + 47698779 C a score=971715.000000 s hg38.chr20_KI270870v1_alt 130941 81 + 183433 GCTCTGCAGGAAGCCCTCGGGGCACCCAGAGGCCTGGCCCTCTCCCTGAGGCCGCAGCTGGGCACGTTCTGCCCTGGGCTC s panTro5.chr20 66457033 81 + 66533130 GGTCTGCAGGAAGCCCTCGGGGCACCCAGAGGCCTGGCCCTCTCCCTGAGGCCGCAGCTGGGCACGTTCTGCCCTGGGCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132079 81 + 62195757 GGTCTGCAGGAAGCCCTCGGGGCACCCAGAGGCCTGGCCCTCTCCCTGAGGCCGCAGCTGGGCACGTTCTGCCCTGGGCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521152 81 - 578057 GCTCTGCAGGAAGCCCTCGGGGCACCCAGAGGCCTGGCCCTCTCCCTGAGGCCGCAGCTGGGCACGTTCTGCCCTGGGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110043514 79 - 110113093 GCTCTGCAGGAAGCCCT-GGGGCAGCCAGAGGCCCGGCCCTCTCCCTGAGGCCGCAGCT-GGCACGTTCTGCCTTGGGCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777204 81 - 92844088 GCTCCACTGGAAGCCCTCGGGGCAACCAGAGGCCCAGCCCTCTCCCTGAGGCCGCAGCTGGGCATGTTCTGCCCAGGGCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443260 81 + 96509753 GCTCCACTGGAAGCCCTCGGGGCAACCAGAGGCCCAGCCCTCTCCCTGAGGCCGCAGCTGGGCATGTTCTGCCCAGGGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914351 81 - 16982598 GCTCCACTGGAAGCCCTCGAGGCAACCAGAGGCCCAGCCCTCTCCCTGAGGCCGCAGCTGGGCATGTTCTGCCCGGGGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717154 73 - 3785965 GCTCCACTGGAAGCCCTCGGGGCAA--------CCAACCCTCTCCCTGAGGCCGCAGCTGGGCATGTTCTGCCCAGGGCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295374 81 - 90373283 GCTCCACTGGAAGCCCTCGGGGCAACCAGATGCCCAGCCCTCTCCCTGAGGCCGCAGCTGGGCATGTTCTGCCCAGGGCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109669 81 - 179258 GCTCCACTGGAAGCCCTCGGGGCAACCAGAGGCCCAGCCCTCTCCCTGAGGCCGCAGCTGGGCATGTTCTGCCCAGGGCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585495 81 - 5823884 GCTCCACTGGAAGCCCTCGGGGCAGCCAGAGGCCCAGCCCTCTCCCCGAGGCCGCAGCTGGGCACGTTCTGCCCAGGGCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66624 81 + 372756 GCTTCACAGGAAGCCCTCGGGGCAACCAGGAGCCGGGCCCTCTCCCTGAGGCCGCAGCTGGGCATGTTCTGCCTTGGGCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302175 80 + 16356641 GCTTCACAGGAAGCCCTCTGGGCAACCAGGGGCC-GGCCCTCCCCCTGAGGCCACAGCTGGGCTTGTTCTGTCCTGGGCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171287 81 + 1231380 GCTTCACAGGAAGCCCTCGGGGCAACCGGGGACCCGGCCCTCTCCCTGAGGCCGCAGCTGGGCATGTTCTGCCCTGGGCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703265 81 + 11732439 GCTTCACAGGAAGCCCTCGGGGCGACCGGGGGCCCGGCCCTCTCCCTGAGGCCGCAGCTGGGCATGTTCTGCCCTGGGCTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56883643 80 + 57149010 GCTCTGGAGGATGCCCT-GGGGCAGCCAGAGGCCAGGCCCTTTCCCTGAGGCCGCAGCTGGGTGCTTTCTGCCCTGGGCTC i micMur3.chr18 C 0 I 503 s proCoq1.NW_012150197v1 1878514 81 - 2029793 GCTCCGTAGAACGCCCTCGGGGCAGCCAGAGGCCAGGCCCTTTCCCTGAGGCCGCAGCTGCGTGCTTTCTGCCCTGGGCTC i proCoq1.NW_012150197v1 C 0 I 357 s otoGar3.GL873542 22866076 79 + 22939663 GCTCTGCATTATGCCTC-AGGGCAGCCAGAGGTCAGGCCCTTTCCCTGAGGTTGCAGCTGGGTGCTTTCTGCCCT-GGCTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181810592 16 + 182113224 GGTTC-------------------------------------------AGACAGCAGCT---------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47624598 41 + 47698779 -------------------GGGCAGCCGG---------CCTCTCCT---AGCCTCAGCT---------CCGCCGTGGCTTT i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 263203 607 - 397369 I a score=186441.000000 s hg38.chr20_KI270870v1_alt 131022 21 + 183433 CATGGCC-AAGGCCTGGAATGT s panTro5.chr20 66457114 21 + 66533130 CATGGCC-AAGGCCTGGAATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132160 21 + 62195757 CATGGCC-AAGGCCTGGAATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521233 21 - 578057 CATGGCC-AAGGCCTGGAATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110043593 21 - 110113093 CATGGCC-AAGGCCTGGAATGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777285 21 - 92844088 CGTGGCC-AAGGCCTGGAATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443341 21 + 96509753 CGTGGCC-AAGGCCTGGAATGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914432 21 - 16982598 CGTGGCC-AAGGCCTGGAATGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717227 21 - 3785965 CGTGGCC-AAGGCCTGGAATGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295455 21 - 90373283 CGTGGCC-AAGGCCTGGAATGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109750 21 - 179258 CGTGGCC-AAGGCCTGGAATGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585576 21 - 5823884 CGTGGCC-AAAGCCTAGAATGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66705 21 + 372756 CGTGCCC-AAGGCCTGGAATGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302255 21 + 16356641 CATGCCT-GAGGCCAGGAATGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171368 21 + 1231380 CGTGCCC-AAGGCCTGGAATGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703346 10 + 11732439 CATGCCA-AGG----------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22866155 21 + 22939663 AGTGCCTGAAGGCCTGACCTG- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47624639 21 + 47698779 CAGAGCC-CAGGCCTGACGGGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1878595 357 - 2029793 I e mm10.chr2 181810608 0 + 182113224 C e micMur3.chr18 56883723 503 + 57149010 I e dasNov3.JH569290 263203 607 - 397369 I a score=3140304.000000 s hg38.chr20_KI270870v1_alt 131043 329 + 183433 ACTGCCTTAGGGCTCACCACCCTCAACTCTGTCAGCCTGGCTG----------------------------GCCCAGAGG----------CTGCGTGTCTGAGCTGGTCCGCATGGGGTTGGAACAGACAGAGTTGCTG----ATGGATATGAAT-----------CAGATGTCAATGACCTTCTGGTCAGCCTTCATTGCCAGC----CACCTGTCCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCTGCTCCACAGGTGATCC--------AGCTCTCACATGTGCTCAGAGTACATTTC----------TGGGGTCCCTCTTCTCCCCAA--CCTGAACCCCTCTTGTACCCTCACACTTGTA-GCTTGCCCTCCTGGGA---GTGGCTGGATC--------------------------CAGGGAA-----GGCC--T s panTro5.chr20 66457135 329 + 66533130 ACTGCCTTAGGACTCACCACCCTCAACTCTGTCAGCCTGGCTG----------------------------GCCCAGAGG----------CTGCGTGTCTGAGCTGGTCCGCACGGGGTTGGAACAGACAGAGTTGCTG----ATGGATATGAAT-----------CAGATGTCAATGACCTTCTGGTCAGCCTTCATTGCCAGC----CACCTGTCCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCTGCTCCACAGGTGATCC--------AGCTCTCACATGTGCTCAGAGTACATTTC----------TGGGGTCCCTCTTCTCCCCAA--CCTGAACCCCTCTTGTACCCTCACACTTGTA-GCTTGCCCTCCTGGGA---GTGGCTGGATC--------------------------CAGGGAA-----GGCC--T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132181 329 + 62195757 ACTGCCTCAGGACTCACCACCCTCAACTCTGTCAGCCTGGCTG----------------------------GCCCAGAGG----------CTGCGTGTCTGAGCTGGTCCGCACGGGGTTGGAACAGACAGAGTTGCTG----ATGGATATGAAT-----------CAGATGTCAATGACCTTCTGGTCAGCCTTCATTGCCAGC----CACCTGTCCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCTGCTCCATAGGTGATCC--------AGCTCTCACATGTGCTCAGAGTACATTTC----------TGGGGTCCCTCTTCTCCCCAA--CCTGAACCCCTCTTGTACCCTCACACTTGTA-GCTTGCCCTCCTGGGA---GTGGCTGGATC--------------------------CAGGGAA-----GGCC--T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521254 327 - 578057 ACTGCCTTAGGACTCACCACCCTCAACTCTGTCAGCCTGGCTG----------------------------GCCCAGAGG----------CTGCGTGTCTGAGCTGGTCCGCACGGGGTTGGA----ACAGAGTTGCTG----ATGGATATGAAT-----------CAGATGTCAGTGACCTTCTGGTCAGCCTTCATTGCCAGC----CACCTGTCCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCTGCTCCACAGGTGATCC--------AGCTCTCACATGTGCTCACAGTACATTTC----------TGGGGTCCCTCTTCTCCTGAACCCCTGAACCCCTCTTGTACCCTCACACTTGTG-GCTTTCCCTCCTGGGA---GTGGCTGGATC--------------------------CAGGGAA-----GGCC--T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110043614 329 - 110113093 ACTGCCTTAGGACTCACCACCCTCAACTCTGTCATCCTGGCTG----------------------------GCCCAGAGG----------CTGCGTGTCTGAGCTGGTCCGCACGGAGTTGGAACAGACAGAGTTGCTG----ATGGATATGAGT-----------CAGATGTCAGTGACCTTCTGGCCAACCCTCATTGCCAGC----CACCTGTCCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCTGCTCCACAGGTGATAC--------AGCTCTCACATGTGCTCAGAGTACATTCC----------TGGGGTCCCTCTTCTCCCCAC--CCTGAACCCCTCTTGTACCCTCACACTTGCA-GCTTGCCCTCCTGGGA---GTGGCTGGATC--------------------------CAGGGAA-----GGCC--T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777306 331 - 92844088 ACTGCTTTAGGGCTCACCACCCTCAACTCTGTCATGCTGGCTG----------------------------GCCCAGATG----------CTGTGTGTCTGAGCCGCTCCGCACAGGGCTGGAACAGTCAAAGTTGCTG----ATGGATAATGGT-----------CAGATGTCAGTGACCTTCAGGTCAGCCTTCACTGCCAGC----CACCTCTCCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCGGCTCCACAGGTGATCC--------AGCTCTCACATGTGCTCAGAGTACATTTC----------TGGGGTCCCTCTTCTCCTCAC--CCCGAACCCCTCTTGTTCCCTCACACCTGTG-GCTTGCCCTCCTGGGA---GCGGCTGGATC--------------------------CAGGGAA-----GGCCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443362 330 + 96509753 ACTGCTTTAGGGCTCACCACCCTCAACTCTGTCATGCTGGCTG----------------------------GCCCAGATG----------CTGTGTGTCTGAGCTGCTCTGCACAGGGCTGGAACAGTCAAAGTTGCTG----GTGGATAATGGT-----------CAGATGTCAGTGACCTTCAGGTCAGCCTTCACTGCCAGC----CACCTCTCCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCGGCTCCACAGGTGATCC--------AGCTCTCACATGTGCTCAGAGTACATTTC----------TGGGGTCCCTCTTCTCCTCAC--CCTGAACCCCTCTTGTACCCTCACACCTGTG-GCCTGCCCTCCTGGGA---GCGGCTGGATC--------------------------CAGGGAA-----GGCC-TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914453 329 - 16982598 ACTGCTTTAGGGCTCACCACCCTCAACTCTGTCATGCTGGCTG----------------------------GCCCAGATG----------CTGTGTGTCTGAGCTGCTCCGCACAGGGCTGGAACAGTCAGAGTTGCTG----ATGGATAATGGT-----------CAGATGTCAGTGACCTTCAGGTCAGCCTTCACTGCCAGC----CACCTCTCCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCGGCTCCACAGGTGATCC--------AGCTCTCACATGTGCTCAGAGTACATTTC----------TGGGGTCCCTCTTCTCCTCAC--CCTGAACCCCTCTTGTACCCTCACACCTGTG-GCTTGCCCTCCTGGGA---GTGGCTGGATC--------------------------CAGGGAA-----GGCC--T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717248 329 - 3785965 ACTGCTTTAGGGCTCGCCACCCTCAACTCTGTCATGCTGGCCG----------------------------GCCCAGATG----------CTGTGTGTCTGAGCTGCTCCGCACAGGGCTGGAACAGTCAAAGTTGCTG----ATGGATGATGGT-----------CAGATGTCAGTGACCTTCAGGTCAGCCTTCACTGCCAGC----CACCTCTGCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCTGCTCCACAGGTGATCC--------AGCTCTGACATGTGCTCAGAGTACACTTC----------TGGGGTCCCTCTTCTCCTCAC--CCTGAACCCCTCTTGTACCCTCACACCTGTG-GCTTGCCCTCCTGGGG---GTGGCTGGATC--------------------------CAGGGAA-----GGCC--T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295476 329 - 90373283 ACTGCTTTAGGGCTCACCACCCTCAACTCTGTCATGCTGACTG----------------------------GCCCGGATG----------CTGTGTGTCTGAGCTGCTCCGCACAGGGCTGGAACAGTCAAAGTTGCTG----ATGGATAATGGT-----------CAGATGTCAGTGACCTTCAGGTCAGCCTTCATTGCCAGC----CACCTCTCCTAGGGG---------------ACTATGA-GAGGCTGTGCCTGGCACCTGATCCACAGGTGATCC--------AGCTCTCACATGTGCTCAGAGTACATTTC----------TGGGGTCCCTCTTCTCCTCAC--CCTGAACCCCTCTTGTACCCTCACACCTGTG-GCTTGCCCTCCTGGGA---GTGGCTGGATC--------------------------CAGGGAA-----GGCC--T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 109771 329 - 179258 ACTGCTTTAGGGCTCACCACCCTCAACTCTGTCATGCTGGCTG----------------------------GCCCAGATG----------CTGTGTGTCTGAGCTGCTCCGCACAGGGCTGGAACAGTCAAAGTTGCTG----ATGGATAATGGT-----------CAGATGTCAGTGACCTTCAGGTCAGCCTTCATTGCCAGC----CACCTCTGCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCTGCTCCACAGGTGATCC--------AGCTCTCACATGTGCTCAGAGTACATTTC----------TGGGGTCCCTCTTCTCCTCAC--CCTGAACCCCTCTTGTACCCTCACACCTGTG-GCTTGCCCTCCTGGGA---GTGGCTGGATC--------------------------CAGGGAA-----GGCC--T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585597 329 - 5823884 ACTGCCTTAGGGCTCACCACCCTCAACTCTGTCATGCTGGCTG----------------------------GCCCAGATG----------CTGTGTGTCTGAGCTGGTCCGCACGGGGCTGGAACAGTCAAAGTTGCTG----ATGGATAATGGT-----------CAGATGTCAGTGACCTTCAGGTCAGCCTTCATTGCCAGC----CACCTCTCCTAGGGG---------------ACTGTGA-GAGGCTGTGCCTGGCACCTGCTCCACAGGTGATCC--------ACCTCTCACATGTGCTCAGAGTACATGTC----------TGGGGTCCCTCTTCTCCCCAC--CCTGAACCCCTCTTGTACCCTCACACCTGTG-TCTTGCCCTCCTGGGA---GCGGCTGGATC--------------------------CAGGGAA-----GGCC--T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 66726 328 + 372756 ACTACCTTAGGACTTGCCACACTCACCTCTGTCAGCCTGGCTG----------------------------GCCCTGATG----------CTGCGTGTCTGAGCTGGTCCTCATGGGGTTGGAGCAGACAGAGTTGCTG----ATGGATGTAAGT-----------CAGATGTCAGTGACCTTCTGGTCAACCTTCATTGCCAGC----CACCTCT-CTAGGGG---------------ATTGTCA-GAGGCTGTGCCTGGCACCTGCCACACAGGTGATCC--------AGCTCTCACATGTGCTCAGTGTCCATTTC----------TGGGGTCTCTCTTCTCCCCAG--CTGGAACCTCACTTGTATCCTCATACTTGTG-GCTTGTCCTCCTGGGA---ATGGCTGGATC--------------------------CAGAGAA-----GGCC--T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302276 328 + 16356641 ACTGCCTTAGGACTTGCCACACTCATCTCTGTCAGCCTGGCTG----------------------------GCCCTGATG----------CTGCGTGCCTGAGCTGGTCCTCATGGGGTTGGAACAGGCAGAGTTGCTG----ATAGATGTGAGT-----------CAGATGTCAGTGACCTTCTGGTCAACCTTCATTGCCAGC----CACCTCT-CTAGGGG---------------ATTGTCA-GAGGCTGTGCCCGGCACCCGCCACACAGGTGATCC--------AGCTCTCACATGTGCTCAGCGTCCATTTC----------TGGGGTCTCTCTTCTCCCCAC--CTGGAACCTCACTTGTACCCTCACACTTGTG-GCTTGTCCTCCTGGGA---ATGGCTGGATC--------------------------CAGGGAC-----AGCC--T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171389 308 + 1231380 ACTGCCTTAGGACTTGCCACACTCATCTCTGTCAGCCTGGCTG----------------------------GCCCCGATG----------CCGCGTGCCTGAGCTGGTCCTCACGGGGTTGGAACAGACAGAGTTGCTG----ATGGATGTAAGT-----------CAGATGTCAGTGACCTTCTGGTCAACCTTCATTGCCAGC----CTTCTCT-CTAGGGG---------------ATTGTCA-GAGGCTGTGCCTGGCACCTGC----------------------------CACATGTGCTCAGCGTCCATTTC----------TGGGGTCTCTCTTCTCCCCAC--CTGGAACCTCACTTGTATCCTCACACTTCTG-GCTTGTCCTCCTGGGA---ATGGCTGGATC--------------------------CAGGGAC-----GGCC--T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703356 323 + 11732439 ----CCTTAGGACTTGCCACACTTGTCTCTGTCAGCCTGGCTG----------------------------GCCCTGATG----------CTGCGTGTCTGAGCTGGTCCTCACGGGGTTGGAACAGACAGAGTTGCTG----ATGGATGTAAGT-----------CAGACGTCAGTGACCTTCTGGTCAACCTTCATTGCCAGC----CACCTCT-CTAGGGG---------------ATTGTCA-GAGGCTGTGCCCGGCACGTGCCACACAGGTGATCC--------AGCTCTCACATGTGCTCAGCGTCCATTTC----------TGGGGTCTCTCTTCTCCCCAC--CTGGAACCTCACTTGTATCCTCACAC-TGTG-GCTTGTCCTCCTGGGA---CTGGCTGGACC--------------------------CAGGGAA-----GGCC--T i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22866176 303 + 22939663 ------TCTGGAC--ATCATCCTCGGCTCTGGCAGCCTG-CTG----------------------------GGTCCAATG----------CTGC-CCTCTGAGTTCATCCTCTGGGG---GAAAAAGACAGAGCTGCTG----CCAGGCA--------------------------------CCTGATCATACCCC-TTGCCAAC----CATCTGTCCTAGACC---------------A-----A-GAAGCTACACA-GGCACCTGCACCCCAGGGGACCC--------AGATG-CATGTGTGCT-------CGTTCC----------TAGGGTCCCTCCTCTCCCTGC--TTGGAGCCCCACATTT--CCTCATGTCT-TG-GCCCTCACCCTCCAGG---ATGGCTGGGTCCTGGCTCTGGGGCAGAGTGTCTTCCTCAAGGAA-----GGCT--T i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181810608 274 + 182113224 ---------------------CTCAGCTCTG---------------------------------------------GGAG----------CT----------GCTGGACCTCA---GGGTGGAACAGGCA--------------------------------------------AGTGTCTTTC--ATTAACCTCTACTGCCA------CATGTCCTCTATAAG---------------ACTTAGA-AGGGCTATGCATAGCACCTTTTCCACTGTTGATCTA-------AACTCTCACCTGTACGCAGAGCTAATTTTATGGAGGATAGAGGGATCCTCCTGTCCTTTT--ACTGTACACCGCTATTTTCTTTCTACCTGGGCACCAGGCCTTCCCAGG---CTGGCTGGGTC------------TGCGTTCTCATTCTCAGAGAAAATTGGGC---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47624660 264 + 47698779 GCTCTGCTGGGACTCCATGCCCTCGACCCTGGCCCACCGGGCG----------------------------GC-----------------------------------------AGGGTGGGCA-------AGCCGCTG----GTGGCCGCGA-------------CTGGTCCCCGGGA---TGGAGGCCACCCCCACTGAGAGCACGGCGCCC-------GGG---------------ACGGTG--GGGGCTGTCCCT-GCAGCGGTgccgccgg-ggccc--------gggcctcgcccccgctcg--gtcggcccc----------cggggTTCCTGC-CTCCTTGC--CGTGGACCAGGCTAGCTCCGTCCCCTTGCTG-GCTCTGCCT-----------GGGCCGTGTC--------------------------CCGGCCG------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 263810 402 - 397369 ACTGCTTTATGGCTCATCA--CTCGGCTCTGCCACTCCCCCTGTGTCTAGGGATCCCCCAAGCTCATGAGTGTCCAGAGAAGGGACAACCCTCTCTACCTGCATTGGATCTGATGTAACTGGAAAAG-CACAGGAGCCGTACTATGGCTCTGAGTCATCCCAAAGCCAAATGCCAGTGGCTTTCTGACTAGTCTCCACTCTGAGC----TGCCCTTCCTCAGAGGCCAACTTCTTCCACACCATGAGGAGGCCATACTTGATCCCTGGGGTGCAGGTGGTCCAGAGACCCAGCCCTCCCATGTACGCAGAGTCCACTCC----------CAGGGCCCC----CACCCCTG--CCTCAGCCCTGTGGCTTCCTCTTCCACTGTT-GCTGCCCCCCTCAGGGCCCACCTCCCTCCC--------------------------CAGTGGA-----GGCT--G i dasNov3.JH569290 I 607 C 0 e proCoq1.NW_012150197v1 1878595 357 - 2029793 I e micMur3.chr18 56883723 503 + 57149010 I a score=608385.000000 s hg38.chr20_KI270870v1_alt 131372 63 + 183433 TGCT---TCAGGGCCTGGAGAAGGGAAGGAGCTCCTCTGCCTAAATATTCGTGGGCACA------TACACGT s panTro5.chr20 66457464 63 + 66533130 TGCT---TCAGGGCCTGGAGAAGGGAAGGAGCTCCTTTGCCTAAATATTCGTGGGCACA------TACACGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132510 63 + 62195757 TGCT---TCAGGGCCTGGAGAAGGGAAGGAGCTCCTTTGCCTAAATATTCGTGGGCACA------TACACGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521581 63 - 578057 TGCT---TCAGGGCCTGGAGAAGGGAAAGAGCTCCTCTGCCTAAATATTCGTGGGCACA------TACACGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110043943 62 - 110113093 TGCT---TCAGGGCCTGGAAAAGGGAAGGAATTCC-CTGCCTAAATATTCATGGGCACA------TACGCGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777637 64 - 92844088 TGCTGCTTCAGGGCCTGGAAAAGGG-AGGAGCTCC-CTGCCTAAATATTCATGGGCACA------TGCACGG i rheMac8.chr10 C 0 I 130 s macFas5.chr10 96443692 64 + 96509753 TGCTGCTTCAGGGCCTGGAGAAGGG-AGGAGCTCC-CTGCCTAAATATTCATGGGCACA------TGCACGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914782 64 - 16982598 TGCTGCTTCAGGGCCTGGAAAAGGG-AGGAGCTCC-CTGCCTAAATATTCATGGGCACA------TGCACGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717577 64 - 3785965 TGCTGCTTCAGGGCCTGGAAAAGGG-AGGCGCTCC-CTGCCTAAATATTCATGGGCACA------TGCACGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295805 64 - 90373283 TGCTGCTTCAGGGCCTGGAAAAGGG-AGGAGCTCC-CTGCCTAAATATTCATGggcaca------tgcacgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110100 64 - 179258 TGCTGCTTCAGGGCCTGGAAAAGGG-AGGAGCTCC-CTGCCTAAATACTCATGGGCACA------TGCACGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585926 65 - 5823884 TGCTGCCTCAGGGCCTGGAAAAGGGAAGGAGCTCC-CTGCCTAAATATTCACGGGCACA------TACACGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67054 65 + 372756 TGCTGCTTCAGGGCCTGGAAAAGGGAAGAAGCTCC-TTCCCACAATGTTCTTGGGCATG------TACATGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302604 65 + 16356641 TGCTGCTCCAGGGCCTGGAAGAGGGAAGAAGCTTC-CTGCCACCATGTTCTTAGGCATG------TGCATGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171697 63 + 1231380 GGCTGCTCCAGGGCCTGGAAA--GGGAGAAGCTCC-CAGCCTCAGTATTCTTGGGCATG------TGCATGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703679 65 + 11732439 TGCTGCTTCAGGGCCTGGAAAAGGGAAGAAGCTCC-CGGCCACGATATTCTTGGGCATG------TACCTGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1878952 62 - 2029793 ---TGCTCCAGGGGCAGGAGAAGGGAAGGAGCTCC-CTGCCTGCATGTTCATAGGCACA------TACATGT i proCoq1.NW_012150197v1 I 357 C 0 s otoGar3.GL873542 22866482 62 + 22939663 ---TGCTCCCAGGCCTAGAGAAGGAAAGGAGCTCA-CCGTCTGTATGTCTATAGGTGCA------TGCGTGC i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181810882 67 + 182113224 ---TGCTTTAGGAACTGGAGAAGGG-AGGAGTACT-TCATCTACACATCCACGAGCACAAATGTCTACACAT i mm10.chr2 C 0 I 11 s canFam3.chr24 47624924 47 + 47698779 --CGTCCTCAGGTC--------GGG--------TC-GTGCCGCCGTGCTCACGGGTACG------CCCCGAG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 264212 46 - 397369 -------------------TGCGGGCAGGGTTGCC-CTGCCTACATGTCCATTGGCATG------CACACTT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56883723 503 + 57149010 I a score=73823.000000 s hg38.chr20_KI270870v1_alt 131435 5 + 183433 GCACA s panTro5.chr20 66457527 5 + 66533130 GCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132573 5 + 62195757 GCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521644 5 - 578057 GCACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044005 5 - 110113093 GCACG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777831 5 - 92844088 GCACA i rheMac8.chr10 I 130 C 0 s macFas5.chr10 96443756 5 + 96509753 GCACA i macFas5.chr10 C 0 I 130 s macNem1.NW_012014244v1 16914846 5 - 16982598 GCACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717641 5 - 3785965 GCACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295869 5 - 90373283 gcaca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110164 5 - 179258 GCACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585991 5 - 5823884 GCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67119 5 + 372756 GCACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302669 5 + 16356641 GCACG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171760 5 + 1231380 GCACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703744 5 + 11732439 GTGCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1879014 5 - 2029793 GCACA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22866544 5 + 22939663 ACACA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181810960 5 + 182113224 GCACA i mm10.chr2 I 11 C 0 s canFam3.chr24 47624972 5 + 47698779 GCGTG i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 264258 5 - 397369 GTGTG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56883723 503 + 57149010 I a score=602453.000000 s hg38.chr20_KI270870v1_alt 131440 57 + 183433 CAC--AGCACATGTGCGTCAGAGGCATCCTAACTTTAAGCTCAACTTTAATTTGGTTAC s panTro5.chr20 66457532 57 + 66533130 CAC--AGCACATGTGCGTCAGAGGCATCCTAACTTTAAGCTCAACTTTAATTTGGTTAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132578 57 + 62195757 CAC--AGCACATGTGCGTCAGAGGCATCCTAACTTTAAGCTCAACTTTAATTTGGTTAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521649 57 - 578057 CAC--AGCACATGTGCGTCAGAGGCATCCTAACTTTAAGCTCAACTTTAATTTGGTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044010 56 - 110113093 CAC--AGCACATGTGCGTCAGAGGCA-CCTAACTTTAAGCTCAACTTTAATTTGGTTAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777836 57 - 92844088 CAC--AGCACATGTGTGCCACCCGCACCCTAACTTTAAGCTCAACTTTAATTTGGTTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443891 57 + 96509753 CAC--AGCACATGTGTGTCACCCGCACCCTAACTTTAAGCTCAACTTTAATTTGGTTCC i macFas5.chr10 I 130 C 0 s macNem1.NW_012014244v1 16914851 57 - 16982598 CAC--AGCACATGTGTGTCACCCGCACCCTAACTTTAAGCTCAACTTTAATTTGGTTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717646 57 - 3785965 CAC--AGCACTTGTGCGTCACCCGCACCCTAACTTTAAGCTCAACTTGAATTTGGTTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295874 57 - 90373283 cac--agcacatgtgcgtcacaggcacCCTAACTTTAAGCTCAACTTTAATTTGGTTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110169 57 - 179258 CAC--AGCACATGTGCGTCACCCGCACCCTAACTTTAAGCTCAACTTTAATTTGGTTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5585996 51 - 5823884 CAC--AGCA--TGTGCGTCACAGGCATCCTAACTTTAAGCTCAACTTTGGT----TACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67124 57 + 372756 CAC--AGCAGGTGTGCATCAGAGGCATCCTAACTTTAACCTCGACTTTAATTTGGTTAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302674 57 + 16356641 CAC--AGCACGTGGGCATCAGAGGCACCCTAACTTTCAGCTCGACTTTAATTTGGTTAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171765 57 + 1231380 CAC--AGCACGTGTGCATCAGAGGCACCCTAACTTTAAGCTCGACTTTAATTTGGTTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703749 52 + 11732439 CAC--AGCACGTGTGCATCGGAGCCATCCTAACTTTAAGCTCGAC-----TTTGGTTAT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1879019 57 - 2029793 TAC--ATGACATGTGCTTCAGAGACATCCCAACTCCACATTCAGCTTGAATTTGGCTAC i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22866549 58 + 22939663 TGTG-AGGACATATGCTTCAGAGCTATTCCAGCCTTATCCTCAACTTTAATTTGGCTGC i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181810965 41 + 182113224 CAC--AACACTCATGCGTCAGAGGTATCCTAACTTCAAATTCT---------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47624977 56 + 47698779 ---CAGGCGCGTGCGCTCCAGGGCCATCGCGGCTTCAAGCTGAGCCGTACTCTGACTCC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 264263 50 - 397369 ---------CACATGCTTCAGAGATAGCCTAACTTGCAGCTCAATTTTGCCTGGATCCC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56883723 503 + 57149010 I a score=711307.000000 s hg38.chr20_KI270870v1_alt 131497 42 + 183433 TTTTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC s panTro5.chr20 66457589 42 + 66533130 TTTTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132635 42 + 62195757 TTTTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521706 42 - 578057 TTTTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044066 42 - 110113093 TTTTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777893 42 - 92844088 TTTTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443948 42 + 96509753 TTTTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914908 41 - 16982598 TTTTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTT-CAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717703 42 - 3785965 TTTTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295931 42 - 90373283 TTCTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110226 42 - 179258 TTCTTCTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586047 42 - 5823884 TTTTACTTCTTGAGTTAAGTTGTGTGGGAGAAACTTCCAGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67181 42 + 372756 CTTTTCTTCTTGAGTTAAGTTGTGTGGAAGAAACTTCTAGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302731 42 + 16356641 CTTTTCTTCTTGAGTTAAGTTGTGTGGAAGAAACTTCCAGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171822 37 + 1231380 CTTTTCTTC-----TTAAGTTGTGTGGAAGAAACTTCTAGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703801 41 + 11732439 CTTTTCGTC-TGAGTTAAGTTGTGTGGAAGAAACTTCTAGTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56884226 42 + 57149010 TTTTCCTCCTCGAGTTGAGTTGTATGGGAGAAACTTCCAGCC i micMur3.chr18 I 503 I 136 s proCoq1.NW_012150197v1 1879077 42 - 2029793 TTTTCCTCCTTGAGTTAAGCTGTGTGGGAGAAACTTCCAGTC i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22866608 42 + 22939663 TTTTCCTTCTTGAGTTAAATTATGTGGGAGAAACTTCCAGTC i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181811006 42 + 182113224 TTTTCCTTCTTGAGTTACGTTGTATAGGAGAGATTTTCAGTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47625034 42 + 47698779 TTCTCCTCCTTGAGTCCAGTTGCGTGGGAGAAGCTCACAGTC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 264313 37 - 397369 TTTTCCTTC-----TTAAATTGTATGGGAGAAACCAACAGTC i dasNov3.JH569290 C 0 C 0 a score=919840.000000 s hg38.chr20_KI270870v1_alt 131539 114 + 183433 TGAGAGGCACCGGCTGT--CCT----CCAAGGACTGAGTGGAGG---AGGGGCCACCGCTTGGCTCGCGGGTGAGCCAG-----GAGTGGGCACCAGTC--TCCCTCGCAGA-----GCAGGCTCAGCCTGGGGG s panTro5.chr20 66457631 114 + 66533130 TGAGAGGCACCGGCTGT--CCT----CCAAGGACTGAGGGGAGG---AGGGGCCACCGCTTGGCTCACGGGTGAGCCGG-----GAGTGGGCACCAGTC--TCCCTCGCAGA-----GCAGGCTCAGCCTGGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132677 114 + 62195757 TGAGAGGCACCGGCTGT--CCT----CCAAGGACTGAGGGGAGG---AGGGGCCACCGCTTGGCTCGCGGGTGAGCCGG-----GAGTGGGCACCAGTC--TCCCTCGCAGA-----GCAGGCTCAGCCTGGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521748 115 - 578057 TGAGAGGCACCGGCTGTCCCCT----CCAAGGACTGAGGGGAGG---AGGGGCCACCGCTTGGCTCGCGGGTGAGCCAG-----GAGTGGGCACCAGTC--TCCCTCGCAGA-----GCAGGCTCAGCCT-GGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044108 114 - 110113093 TGAGAGGCACCGGCTGT--CCT----CCAAGGACTGAGGGGAGG---AGGGGCCACCGCTTGGCTCGTGGGTGAGCCAG-----GAGTGGGCACCAGTC--TCCCTCGCAGA-----GCAGGCTCAGCCTGGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92777935 98 - 92844088 TGAGAGGCACCGGCTGT--CCT----CCAAGGACTGAGGGGAGG---AGGAGCCAC----------------GGGCCAG-----GAGTGGGCATCAGTC--GCCCTCGCAGA-----GCAGGCTTAGCCTGGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96443990 98 + 96509753 TGAGAGGCACCGGCTGT--CCT----CCAAGGACTGAGGGGAGG---AGGAGCCAC----------------GGGCCAG-----GAGTGGGCATCAGTC--GCCCTCGCAGA-----GCAGGCTTAGCCTGGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16914949 98 - 16982598 TGAGAGGCACCAGCTGT--CCT----CCAAGGACTGAGGGGAGG---AGGAGCCAC----------------GGGCCAG-----GAGTGGGCATCAGTC--GCCCTCGCAGA-----GCAGGCTTAGCCTGGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717745 98 - 3785965 TGAGAGGCCCCTGCTGT--CCT----CCAAGGACTGAGGGGAGG---AGGAGCCAC----------------GGGCCAG-----GAGTGGGCATCAGTC--GCCCTCGCAGA-----GCAGGCTTAGCCTGAGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90295973 98 - 90373283 TGAGAGGCACCAGCTGT--CCC----CCAAGGACTGAGGGGAGG---AGGAGCCAC----------------GGGCCAG-----GAGTGGGCATCAGTC--GCCCTCGCAGA-----GCAGGCTTAGCCTGGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110268 98 - 179258 TGAGAGGCACCGGCTGT--CCT----CCAAGGACTGAGGGGAGG---AGGAGCCAC----------------GGGCCAG-----GAGTGGGCATCAGTC--GCCCTCGCAGA-----GCAGGCTTAGCCTGAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586089 98 - 5823884 TGAGAGGCACCGGCTGT--CCT----CCAAGAACTGAGGGGAGG---AGGAGCCAC----------------GAGCCAG-----GAGCGGGCATCAGTC--GCCCTCGCAGA-----GCAGGCTTAGCCTGGGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67223 112 + 372756 TGAGAGGCATGGGCTGT--GCC----TCAAGGACAGAGGGGAGG---AAGAGCCAT-GCTTAGCTTGTGGGTGAGCCAG-----GAGTGGGCCCCAGT---GCCCTCCCAGA-----GCAGGCTCGGCCTAGGGG i calJac3.chrUn_GL286459 C 0 I 8 s saiBol1.JH378156 16302773 103 + 16356641 TGAGAGGCGCAGGCTGT--GCC----TCAAGGACGGAGGGGAGG---AGGAGCC-----------TGTGGGTGAGCCAG-----GAGTGGGCCCCAGTC--GCCCTCCCAGA-----GCAGGCTCGGCCTAGGGG i saiBol1.JH378156 C 0 I 8 s cebCap1.NW_016107870v1 1171859 90 + 1231380 TGAGAGGTGTGGGCTGC--GCC----TCAAGGGCGGAGGGGAGG---AGGAACCAG-GCTTAGCTTGCGGGTGAGCCAG-----GAGTGGGCCCCAGCC--GCCCTC---------------------------- i cebCap1.NW_016107870v1 C 0 I 3 s aotNan1.NW_018500483v1 2703842 111 + 11732439 TGAGAGGCATGGGCTGT--GCC----TCAAGGACGGAGGGCAGG---AGGAG-GAT-GCTTAGCTTGTGGGTGAGCCGG-----GAGTGGGCCCCAGTC--GCCCTACCAGA-----GCAGGCTCGGCCT-GGGG i aotNan1.NW_018500483v1 C 0 I 8 s proCoq1.NW_012150197v1 1879119 112 - 2029793 CGAAAGTCGT-GGCTGT--GCT----CCAAGGACCGCGGGT-GG---AGGAGCGGCCGCCAGGCTCCTGGGCGAGCCAG-----GAGCGGGCGTCATGT--GCCCTCTTGGA-----GCAGGCTCAGCCCGGGGC i proCoq1.NW_012150197v1 C 0 I 26 s otoGar3.GL873542 22866650 96 + 22939663 --------------TGT--GCT----TTAAGGACTAAGGGT-GG---AGGAACTGCTACTTGGC-CCTGAGTGGGCCAG-----GGATAGGTACTAGCC--ACCCCCCT--A-----GCAGACTCAGTCCGGGCG i otoGar3.GL873542 C 0 I 5 s mm10.chr2 181811048 61 + 182113224 --------------------------CCAAAG----------GT---GAGAGCTGT----------------GATCTGA-----GGATGGCCACCTGCT--TTT-------A-----ATTGACTTGTTCTGGGGG i mm10.chr2 C 0 I 8 s canFam3.chr24 47625076 102 + 47698779 -GAGTGGCGAGGGCTGC--TCTGCGCTCTGAGGCGTGGGGGCGG---GTGGCCCTC------GGCTCCGGGAGAGCCGGAGCCAGAGTCGGCGCC-------CTCCGGGGGG-----GCAGGCCTG--------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 264350 121 - 397369 --AAAGGCAAGAGGTGT--GCT----CTGAGGAGAGAGGCGAGGACAAGGGGTCAT-CCAGGGCTCATGGCTGAGCCAG-----GGGTCAGTGCCAGCCCAGCCCTTCCAGACAGGTGCAGGGGCAGGCCTGGAG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56884268 136 + 57149010 I a score=238208.000000 s hg38.chr20_KI270870v1_alt 131653 22 + 183433 GCAGGTACACACCACTCTCCGG s panTro5.chr20 66457745 22 + 66533130 GCAGGTACCCACCACTCTCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132791 22 + 62195757 GCAGGTACCCACCACTCTCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521863 22 - 578057 GCAGGTACACACCACTCTCCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044222 22 - 110113093 GCAGGTACACACCACTCTCCGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778033 22 - 92844088 ACAGGTACACACCACTCTCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444088 22 + 96509753 ACAGGTACACACCACTCTCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915047 22 - 16982598 ACAGGTACACACCACTCTCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717843 22 - 3785965 ACAGGTGCACACCACTCTCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296071 22 - 90373283 ACAGGTACACACCACTCTCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110366 22 - 179258 ACAGGTACACACCACTCTCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586187 22 - 5823884 ACAGGTACACACCACTCTCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67343 22 + 372756 GCAGGTACACACTGCTCTCTGG i calJac3.chrUn_GL286459 I 8 C 0 s saiBol1.JH378156 16302884 22 + 16356641 GCGGGTGCACACCGCTCTCCGG i saiBol1.JH378156 I 8 C 0 s cebCap1.NW_016107870v1 1171952 22 + 1231380 GCAGGTGCACGCTACTCTTTGG i cebCap1.NW_016107870v1 I 3 C 0 s aotNan1.NW_018500483v1 2703961 22 + 11732439 GCAGGTGCGCACCACTCTCTGG i aotNan1.NW_018500483v1 I 8 C 0 s otoGar3.GL873542 22866751 20 + 22939663 GCAGGTATGTGTTGCTCTGT-- i otoGar3.GL873542 I 5 C 0 s mm10.chr2 181811117 21 + 182113224 -CAGGTGTGCATGGTTCGCTGT i mm10.chr2 I 8 C 0 s canFam3.chr24 47625178 22 + 47698779 GCAGGTGCGCCCCGCTCTGTGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 264471 19 - 397369 ---GCGCTGTGCTGCTCTGCAG i dasNov3.JH569290 C 0 I 1 e proCoq1.NW_012150197v1 1879231 26 - 2029793 I e micMur3.chr18 56884268 136 + 57149010 I a score=8265.000000 s hg38.chr20_KI270870v1_alt 131675 1 + 183433 T s panTro5.chr20 66457767 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132813 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521885 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044244 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778055 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444110 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915069 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717865 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296093 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110388 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586209 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67365 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302906 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171974 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703983 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1879257 1 - 2029793 T i proCoq1.NW_012150197v1 I 26 C 0 s otoGar3.GL873542 22866771 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811138 1 + 182113224 T i mm10.chr2 C 0 C 0 s canFam3.chr24 47625200 1 + 47698779 T i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 264491 1 - 397369 T i dasNov3.JH569290 I 1 C 0 e micMur3.chr18 56884268 136 + 57149010 I a score=6614814.000000 s hg38.chr20_KI270870v1_alt 131676 360 + 183433 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACCGGGAACTACGCCTCCCACCGCAGGTTTGTCTCCTGCTCGGGTCC-GT-----CTGGCCTGGGTGCTTCGTG-----GTGGGtc-----------t--tcctcctctcctcctcctctgctctccctcTTTGGCTTACCCCAATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTTGGGCGGCACCCTCGCTTT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT s panTro5.chr20 66457768 360 + 66533130 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGTGGCCACATCACCGGGAACTACGCCTCCCACCGCAGGTTTGTCTCCTGCTCGGGTCC-GT-----CTGGCCTGGGTGCTTCGTG-----GTGGGtc-----------t--tcctcctctcctcctcctctgctccccctcTTTGGCTTACCCCAATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTTGGGCGGCACCCTCGCTTT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62132814 360 + 62195757 CTGACACTCTTTTTCCTTTGTCCAGCTGCCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACCGGGAACTACGCCTCCCACCGCAGGTTTGTCTCCTGCTCGGGTCC-GT-----CTGGCCTGGGTGCTTCGTG-----GTGGGtc-----------t--tcctcctctcctcctcctctgctccccctcTTTGGCTTACCCCAATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTTGGGCGGCACCCTCGCTTT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 521886 360 - 578057 CTGACCCTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACCGGGAACTACGCCTCCCACCGCAGGTTTGTCTCCTGCTCGGGTCC-AT-----CTGGCCTGGGTGCTTCGTG-----GTGGGtc-----------t--tcctcctctcctcctcctctgcttcccctcTTTGGCTTACCCCAGTATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTTGGGCGGCACCCTCGCTTT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044245 365 - 110113093 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACTGGGAACTATGCCTCCCATCGCAGGTTTGTCTCCTGCTGGGGTCT-GTCTGGCCTGGCCTGGGTGCTTCGTG-----GTGGGTA-----------T--CcctcctctcctcctcctctgctccccctcTTTGGCTTACCCCAATATCCCGTCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTTGGGCGGCACCCTCGCTTT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778056 359 - 92844088 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACTGGGAACTATGCCTCCCACCGCAGGTTTGTCTCCCGCTCGGGTCT-GT-----CTGGCCTGGGTGCTTCTTG-----GTGGGtc-----------t--tcctcctctcctcctcctctgct-cccctcTGTGGCTTACCCCGATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTGGGGCGGCACCCTCGCTGT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444111 359 + 96509753 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACTGGGAACTATGCCTCCCACCGCAGGTTTGTCTCCCGCTCGGGTCT-GT-----CTGGCCTGGGTGCTTCTTG-----GTGGGtc-----------t--tccttctctcctcctcctctgct-cccctcTGTGGCTTACCCCGATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTGGGGCGGCACCCTCGCTGT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915070 359 - 16982598 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACTGGGAACTATGCCTCCCACCGCAGGTTTGTCTCCCGCTCGGGTCT-GT-----CTGGCCTGGGTGCTTCTTG-----GTGGGtc-----------t--tcctcctctcctcctcctctgct-cccctcTGTGGCTTACCCCGATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTGGGGCGGCACCCTCGCTGT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3717866 359 - 3785965 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACTGGGAACTATGCCTCCCACCGCAGGTTTGTCTCCCGCTCGGGTCT-GT-----CTGGCCTGGGTGCTTCTTG-----GTGGGtc-----------t--tcctcctctcctcctcctctgct-cccctcTGTGGCTTACCCCGATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTGGGGCGGCACCCTCGCTGT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296094 358 - 90373283 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACTGGGAACTATGCCTCCCACCGCAGGTTTGTCTCCCACTCGGGTCT-GT-----CTGGCCTGGGTGCTTCTTG-----GTGGGtc-----------t--tcctcctctcctcctcctctgct-cccctcTGTGGCTTACCCCGATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTGGGGCGGCA-CCTCGCTGT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110389 359 - 179258 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACTGGGAACTATGCCTCCCACCGCAGGTTTGTCTCCCGCTCGGGTCT-GT-----CTGGCCTGGGTGCTTCTTG-----GTGGGtc-----------t--tcctcctctcctcctcctctgct-cccctcTGTGGCTTACCCCGATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTGGGGCGGCACCCTCGCTGT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586210 359 - 5823884 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGATGGCAGCGGCCACATCACTGGGAACTATGCCTCCCACCGCAGGTTTGTCTCCCGCTCGGGTCT-GT-----CTGGCCTGGGTGCTTCTTG-----GTGGGtc-----------t--tcctccgctcctcctcctctgct-cccctcTTTGGCTTACCCCAATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTTGGGCGGCACCCTCGCTTT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67366 358 + 372756 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGTGGCCACATCACTGGGAACTATGCCTCCCACCGCAGGTTTGTCTCCCGCTCGGGTCTGGC-----CTGGCCTGGGTGCTTCGTG-----GTGGGTC-----------T--TCCTCCT---CTCCTCCTCTGCTCCCCCTCTTTGGCTTACCCCAATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTTGGGCGGCACCCTCGCTTT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16302907 354 + 16356641 CTGACGCTCTTTTTCCTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCACTGGCCACATCACGGGGAACTATGCCTCCCACCGCAGGTTTGTCTCCCGCTCGGGTCTGGC-----CTGGCCTGGGTGCTTCGTG-----GTGGGTC-----------T--TCCTCCT---CTCCTCCTCTGCTCCCCCTCTTTGGCTTACCCCAATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGA---CCTGTCTCTTGGGCGGCACCCTCGCTTT--GCTCTC--CTTCCATGA-GCTCCTGCCAAAATCCGCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1171975 357 + 1231380 CTGATGCTGTCTTTCCTTTGT-CAGCTGCCCCACCCCTGGCTGTGACGGCACTGGCCACATCACCGGGAACTACGCCTCCCACCGCAGGTCTGTCTCCCGCTCGGGTCTGGC-----CTGGCCTGGGCGCCACGTG-----GTGGGTC-----------T--GCCTCCT---CTCCTCCTCTGCTCCCCCTCTTTGGCTTACCCCAATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCGCCTGTCTCTCGGGCGGCACCCTTGCTCT--GCTCTC--CTTCCATGAGGCTCCTGCCAAAATCAGCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2703984 357 + 11732439 CTGACGCTCTTTTTCCTTTGTCCAGCTGCCCCACCCCGGGCTGTGACGGCAGTGGCCACATCACTGGGAACTACGCCTCCCACCGCAGGTTTGTCTTCCGCTCGGGTCTGGC-----CTGGCCTGGGTGCCTCGTG-----GTGGGTC-----------T--TCCTCCT---GTCCTCCTCTGCTCCCCCTCTTTGGCTTACCCCAGTATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCTCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTTGGGCGGCA-CCTCGCTTT--GCTCTC--CTTCCGTGAGGCTCCTGCCAAAATCAGCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56884404 357 + 57149010 CTGACACTCTTTTT-CTTTGTCCAGCTGTCCCACCCCTGGCTGTGACGGCAGCGGCCACATCACCGGGAACTATGCCTCCCACCGCAGGTTCGTCCCCTGCTCGGGTCCGG------CTGGCCTGGGTGCTTCGTG-----GTGGGTC-----------T--TCCTCCT---CTCCTC-TCTGCTCCCCCTCTTTGGCTCACCCCGATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCCGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCCAGGGCAGCACGCTCGCTTTGCGCTCTT--CTTCCGTGAGGCTCCTGCCAAAATCGGCCT i micMur3.chr18 I 136 I 55 s proCoq1.NW_012150197v1 1879258 359 - 2029793 CTGACACTCTTTTTCCTTTGTCCAGCTGTCCCACCCCCGGCTGTGACGGCAGCGGCCACATCACCGGGAACTATGCCTCCCACCGCAGGTTCGTCCCCTGCTCGGGTCTGGC-----CCGGCCTGGGTGCTTCGTG-----GTGGGtc-----------t--tcctcct---ctcctc-tctgctccctctctttggctcaccccgatatcccatctcttctctTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCCCTGACCTCCTGTCTCTAGGGCAGCACGCTCGCTTTGCGCTCTT--CTTCAGTGAGGCTCCTGCCAAAATCGGCCT i proCoq1.NW_012150197v1 C 0 I 185 s otoGar3.GL873542 22866772 358 + 22939663 CTGACACTCTGTTTCCTTTGTCCAGCTGTCCCACCCCAGGCTGTGACGGTAGTGGCCACATCACCGGGAACTATGCCTCCCACCGCAGGTTTGTCCCCTGCTTGAGTCTGGC-----CTGGCCTGGGTGCTCCGTG-----GTGGGTC-----------T--TCCTCCT---CTCTGCTTCTGCTTCCCCTCTTTGGTTTACCCTGATGTCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCTCACTCTGCTGACCTCAAGTATGTCTGCGCTCCC-GGCCTCCTGTCTCTGGGGCAGCACTCTAGCTTTGCGCTCTC--TTTCCTTGTGGCTCCTGCCAAAATCGGCC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811139 368 + 182113224 CTGACGCTCTTTTTCCTTTGTCCAGCTGTCCCACCCCCGGCTGTGACGGCAGTGGCCATATCACCGGGAACTATGCCTCCCATCGCAGGTTCGTGCCCTGCTC--CTCTGGT-----CTGGCTCCGGTGCTTTGTGTATGTGTGTGTAGGGGGGAAGGGT--TCCTCCT---CATCTCCTCTGCT-CCCCTCTATGGCTCACCCC-ATATCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCACTCTGCTGACCTCAAGTATGTTTGCGCTCACTGACTGCCTATCTCTTGGGCAGC--TCTAGCTTT--GCTCTCT-CCTTTGTGAGGCTCCTATC-AAGCCAGCCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47625201 348 + 47698779 CTGACGCTCTTTTTCCTCCGTTCAGCTGCCCCACCCCCGGCTGTGACGGCAGCGGCCACATCACCGGGAACTATGCCTCTCACCGCAGGTTTGTC-CCTGCTCGGGTCC-AG-----CTGGCCTGGGTGCTGTGTG-----GTGGGTC-----------T--TCCCT-----GTCCTCCTCTGCTCCCCCTC--TGGCTCACCCCAATGTCCCATCTCTTCTCTTTCAGCCTCTCTGGTTGCCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCCCATTCTGCTGACCTCAAGTATGTCTGCCCTC-CTGGCCTACCATCTCTTGGGCACC--CCTTGCTCT--GCTCTC--CTGCCGGGAAGCTCCAGCC-CCATCGGCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 264492 345 - 397369 CTGACGCTCT-TTTCCTTTGTCCAGCTGTCCCACCCCCGGCTGTGACGGCAGCGGCCACATCACCGGGAACTATGCCTCCCACCGCAGGTTCGTCC----CGCCGGTCTGGC-----CTGGCTCGGGTGCTGTGTG-----GTGGGTC-----------TGGCCCTCCTCG-CTCCCTCTCCGCT-CCCCT-----GCTCCCCCTGATAT-CCGCCTCTTCTCTTACAGCCTCTCTGGTTGTCCTCTTGCTGACAAGAGCCTCAGAAACCTCATGGCTGCTCACTCTGCTGACCTCAAGTACGTTTGCGCTCCCTGACCTGCTCCT------GCTGCA-CCTTGCTTT--CCTTTCTGCTTCCGGGAGGCCTCAGCCAAAACTGGCCT i dasNov3.JH569290 C 0 C 0 a score=736673.000000 s hg38.chr20_KI270870v1_alt 132036 58 + 183433 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCCAGCTCTCCTGAGAT-GGGCAGAGGGGCAG------ s panTro5.chr20 66458128 58 + 66533130 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCCAGCTCTCCTGAGAT-GGGCAGAGGGGCAG------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133174 58 + 62195757 TCCCCAAGGTGCCAAGCCTCAGCTGGCCCCAGCTCTCCTGAGAT-GGGCAGAGGGGCAG------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522246 58 - 578057 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCCAGCTCTCCTGAGAT-GGGCAGAGGGGCAG------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044610 58 - 110113093 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCCAGCTCTCCTGAGAT-GGGCAGAGGGGCAG------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778415 58 - 92844088 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCTAGCTCTCCTGAGAC-GGGCAGAGGGGCAG------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444470 58 + 96509753 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCTAGCTCTCCTGAGAC-GGGCAGAGGGGCAG------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915429 58 - 16982598 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCTAGCTCTCCTGAGAC-GGGCAGAGGGGCAG------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718225 58 - 3785965 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCTAGCTCTCCTGAGAC-GGGCAGAGGGGCAG------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296452 58 - 90373283 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCTAGGTCTCCTGAGAC-GGGCAGAGGGGCAG------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110748 58 - 179258 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCTAGCTCTCCTGAGAC-GGGCAGAGGGGCAG------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586569 58 - 5823884 TCTCCAAGGTGCCAAGCCTCAGCTGGCCCTAGCTCTCCTGAGAT-GGGCAGAGGGGCAG------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67724 58 + 372756 TCTCCAAGGTGTCAAGCCTCAGCTAGCCCTGGCTCTCCTGAGAC-GGGCAGAGGGGCAG------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303261 58 + 16356641 TCTCCAAGGTGCCAAGCCTCAGCTAGCCCCAGCTCTCCTGAGAC-GGGCAGAGGGGCAG------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172332 58 + 1231380 TCTCCAGGGTGCCACGCCTCAGCTAGCCCCAGCTCTCCTGAGAC-GGGCAGAGGGGCAG------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704341 58 + 11732439 TCTCCAAGGTGCCAAGCCTCAGCTAGCCCCAGCTCTCCTGAGAC-GGGCAGAGGGGCAG------ i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22867130 58 + 22939663 TCTCCCAAGTGCCAATCCCAGGCTGGTCCCA-TTCTCCTGGGATGGGGTGGAGTGGCAG------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811507 57 + 182113224 TCTCTAAGATACCA-TCCCAGGCTGGCTCT-GCCTTCCTGGGATGGGGAAGAGGAGCAG------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47625549 54 + 47698779 --TCTCAGGGCTCCGGCCCCGGGCAGCCCCTGCCAGCAGGATG--GGGCCGAGAGACA------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 264837 60 - 397369 TCTCCAGGGCTCCAGCCCCAGGCCGGCCTCTGC-CTCCTGGGAT-GG---GGGCAGCAGAGACCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1879617 185 - 2029793 I e micMur3.chr18 56884761 55 + 57149010 I a score=513418.000000 s hg38.chr20_KI270870v1_alt 132094 34 + 183433 GGCCGTGGAGGGGCCGATTCTGCTTG-GCTGGGGC s panTro5.chr20 66458186 34 + 66533130 GGCCGTGGAGGGGCCGATTCTGCTTG-GCTGGGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133232 35 + 62195757 GGCCGTGGAGGGGCCGATTCTGCTTGTGCTGGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522304 34 - 578057 GGCCGTGGAGGGGCCGATTCTGCTTG-GCTGGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044668 34 - 110113093 GGCCGTGGAGGGGCCGATTCTGCTTG-Gctggggc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778473 34 - 92844088 GGCCGTGGAGCGGCCGATTCCGCTTG-GCTGGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444528 34 + 96509753 GGCCGTGGAGCGGCTGATTCCGCTTG-GCTGGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915487 34 - 16982598 GGCCGTGGAGCGGCCGATTCCGCTTG-GCTGGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718283 34 - 3785965 GGCCGTGGAGGGGCCGATTCCGCTTG-GCTGGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296510 34 - 90373283 GGCCGTGGAGGGGCCGATTCTGCTTG-GCTGGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110806 34 - 179258 GGCCGTGGAGGGGCCGATTCTGCTTG-GCTGGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586627 34 - 5823884 GGCCGTGGAGGGGCCGATTCTGCTTG-GCTGGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67782 34 + 372756 GGCCATGGAGGGGCCGATTCTGCTTG-GCTGGGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303319 34 + 16356641 GGCCTTGGAGGGGCCGATTCTGCTTG-GCTGGGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172390 33 + 1231380 GGCCATGGA-GGGCCGATtctgcttg-gctggggc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704399 34 + 11732439 GGCCGTGGAGGGGCTGATTCTGCTTG-GCTGGGGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56884816 34 + 57149010 GGCTGTGGAGGGGCCGATCCTGCTTG-GCTGGGGC i micMur3.chr18 I 55 I 514 s otoGar3.GL873542 22867188 32 + 22939663 GGC--TGGAGGGGCCGTTCTTGCTTG-GCTGGTGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811564 32 + 182113224 -GGCTTGAAAGGGCTGATTCTGCTTG-GCTGGGC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47625603 31 + 47698779 GGCCACGG--GGGCCGACT-TGCTTG-CCTGGGGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 264897 33 - 397369 GGCCTGGGAGCAGCTGGT-CTACTTG-GCTAGGGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1879617 185 - 2029793 I a score=983542.000000 s hg38.chr20_KI270870v1_alt 132128 105 + 183433 TGCT---------------------CT---GCCTG--------TGT-----GCACCTGCTCTGA-----G----------CTCTG----CTGTTTGCCTCTCC-------------GCT-GGGGGCTAGGGGTCG---------CTGCAGGCTCCTG-----------CGCTGCTCTTG---ACCCATCCCCCACCCT s panTro5.chr20 66458220 105 + 66533130 TGCT---------------------CT---GCCTG--------TGT-----GCACCTGCTCTGA-----G----------CTCTG----CTGTTTGCTTCTCC-------------GCT-GGGGGCTAGGGGCCG---------CTGCAGGCTCCTG-----------CGCTGCTCTTG---CCCCATCCCCCACCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133267 105 + 62195757 TGCT---------------------CT---GCCTG--------TGT-----GCACCTGCTCTGA-----G----------CTCTG----CTGTTTGCCTCTCC-------------GCT-GGGGGCTAGGGGCCG---------CTGCAGGCTCCTG-----------CGCTGCTCTTG---CCCCATCCCCCACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522338 106 - 578057 TGCT---------------------CT---GCCTG--------TGT-----GCACCTGCTCTGA-----G----------CTCTG----CTGTTTGCCTCTCC-------------GCTGGGGGGCTAGGGGCCG---------CTGCAGGCTCCTG-----------TGCTGCTCTTG---CCCCATCCCCCACCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044702 104 - 110113093 tgct---------------------ct---gcctc--------tgt-----gc-cctgctctga-----g----------ctctg----ctGTTTGCCTGTCC-------------ACT-GGGGGCCAGGGGCTG---------CTGCAGGCTCCTG-----------CGCTGTTCTTG---CCCCGTCCCCCACCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778507 105 - 92844088 TGCT---------------------CT---GTCTG--------TGT-----GCCCCTGCTCTGA-----G----------CTCTG----CTGTTCACCTCTCC-------------GCT-GGGTGCTAGGGGCTG---------CTGCAGGCTCCTG-----------TGCTGCTCTTG---CCCCCTTCCCCACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444562 105 + 96509753 TGCT---------------------CT---GTCTG--------TGT-----GCCCCTGCTCTGA-----G----------CTCTG----CTGTTCACCTCTCC-------------GCT-GGGTGCTAGGGGCTG---------CTGCAGGCTCCTG-----------TGCTGCTCTTG---CCCCCTTCCCCACCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915521 105 - 16982598 TGCT---------------------CT---GTCTG--------TGT-----GACCCTGCTCTGA-----G----------CTCTG----CTGTTCACCTCTCC-------------GCT-GGGTGCTAGGGGCTG---------CTGCAGGCTCCTG-----------TGCTGCTCTTG---CCCCCTTCCCCACCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718317 105 - 3785965 TGCT---------------------CT---GCCTG--------TGT-----GCCCCTGCTCTGA-----G----------CTCTG----CTGTTCACCTCTCC-------------GCT-GGGTGCTAGGGGCTG---------CTGCAGGCTCCTG-----------TGCTGCTCTTG---CCCCATTCCCCACCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296544 105 - 90373283 TGCT---------------------CT---GCCTG--------TGT-----GCCCCTGCTCTGA-----G----------CTCCG----CTGTTCACCTCTCC-------------GCT-GGGTGCTAGGGGCTG---------CTGCAGGCTCCTG-----------TGCTGCTCTTG---CCCCATTCCCCACCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110840 105 - 179258 TGCT---------------------CT---GCCTG--------CGT-----GCCCCTGCTCTGA-----G----------CTCTG----CTGTTCACCTCTCC-------------GCT-GGGTGCTAGGGGCTG---------CTGCAGGCTCCTG-----------TGCTGCTCTTG---CCCCATTCCCCACCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586661 105 - 5823884 TGCT---------------------CT---GCCTG--------TGT-----TTCCCTGCTCTGA-----G----------CTCTG----CTGTTCACCTCTCC-------------GCT-GGGGGCTAGGGGCTG---------CTGCAGGCTCCTG-----------CACTGCTCTTG---CCCCATTCCCCACCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67816 101 + 372756 TGC----------------------------TCTG--------TGT-----CCCCCTGCTCTGA-----G----------CTCTG----TTACTTGCCTCTCC-------------ACT-GGGGGCTGGGGGCTG---------CTGCAGGCTCCTG-----------TGCTGCCCTTG---CCCCATCCCCCATCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303353 104 + 16356641 TGCT---------------------CT---GTCTG--------TGT-----CCCCCTGCTCTGA-----G----------CTCTG----CCGCTTGCCTCTCC-------------ACT-GGGGGCT-GGGGCTG---------CTGCAGGCCCCTG-----------CGCTGCTCTTA---CCCCACTCCCCATCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172423 104 + 1231380 tgct---------------------ct---gtctg--------tgt------cccctgctctga-----g----------ctctg----ccgcttgcctctcC-------------ACT-GGGGGCTGGGGGCTG---------CTGCAGGCTCCTG-----------CGCTGCTCTTG---CCCCATCCCCCATCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704433 88 + 11732439 TGCT---------------------CT---GTCTG--------TGT-----CCCCCTGCTCTGA-----G----------CTCCG----CTGTTTGCCTTTCC-------------GCT-GGGGGCT--------------------------CCTG-----------CGCTGCTCTTG---CCCCATCCCCCATCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22867220 135 + 22939663 TGCTGGGCCCCTGTTTTGGGCACTGCT---GCCTGCCCCTCCCTGG-----GTCCCTGCTCTGGGCACTG----------CTCTG----CTGTCTGCTCCTCC--------------CT-GGG---CCAGGGCTG---------CTGCAGGCCCCTG-----------AGCTACTCTCA---CCCCAACTCTCACCCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811596 101 + 182113224 TGTC---------------------CTCGCACCTG--------TG------ACTCCAGCTTTGA-----GCAATCTGAACCTCTGAGCACTGTCTGTCTCACT-------------TGT-TGGAGCA---------------------GAGCTCCTG-----------TACTGCTCCAG---CTCTTTCC-------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47625634 138 + 47698779 TGCT--------------------GCC---GCCTC--------T---------CTCTGCTCTGA-----G----------TGCCG----CTGTCTGCCTGTCCCTTGCTGCCAGCCTCT-GGGGACCGAGGGCCGGGGGGCCTCCGGGGGGCATCCGGGGGCAGGGCCTGCCGCCTCTGGCTCCCGATGGCCCGGCCC i canFam3.chr24 C 0 I 7 s dasNov3.JH569290 264930 80 - 397369 TGCC---------------------CCTAGGCCTT--------TGCCCCCACCCCCTGCTCTGA-----G----------TACC-----CTGT---CCTCACG-------------CCT-CAGGGC-AGGGGCTG---------------------------------GGGTGGCCTGG---C--------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1879617 185 - 2029793 I e micMur3.chr18 56884850 514 + 57149010 I a score=1143837.000000 s hg38.chr20_KI270870v1_alt 132233 80 + 183433 CCAGCCTCTCCTGAAGATCCCCGACAGGGCTGTCTGGGC-CTGCTTT-C-TT----ACTGCCCTAGAGATTTGGGAAAAGCCCAGAA s panTro5.chr20 66458325 80 + 66533130 CCAGCCTCTCCTGAAGATCCCCGACAGGGCTGTCTGGGC-CTGCTTT-C-TC----ACTGCCCTAGAGATTTGGGAAAAGCCCAGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133372 80 + 62195757 CCAGCCTCTCCTGAAGATCCCCGACAGGGCTGTCTGGGC-CTGCTTT-C-TC----ACTGCCCTAGAGATTTGGGAAAAGCCCAGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522444 80 - 578057 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGTCTGGGC-CTGCTTT-C-TC----ACTGCCCTAGAGATGTGGGAAAAGCCCAGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044806 79 - 110113093 CCAGCCTC-CCTGGAGACCCCCGACAGGGCTGTCTGGGC-CTGCTTT-C-TC----ACTGCCCTAGAGATGTGGGAAAAGCGCAGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778612 80 - 92844088 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGTCTGGGC-CTGCCTT-C-TC----ACTGCCCTAGAGATTTGGGGAAAGCCCAGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444667 80 + 96509753 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGTCTGGGC-CTGCCTT-C-TC----ACTGCCCTAGAGATTTGGGGAAAGCCCAGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915626 80 - 16982598 CCAGCCTCTCCTGAAGATCCCCGACAGGGCTGTCTGGGC-CTGCCTT-C-TC----ACTGCCCTAGAGATTTGGGGAAAGCCCAGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718422 80 - 3785965 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGTCTGGGC-CTGCCTT-C-TC----ACTGCCCTAGAGATTTGGGGAAAGCCCAGAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296649 80 - 90373283 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGTCTGGGC-CTGCCTT-C-TC----ACTGCCCTAGAGATTTGGGAAAAGCCCAGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 110945 80 - 179258 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGTCTGGGC-CTGCCTT-C-TC----ACTGCCCTAGAGATTTGGGGAAAGCCCAGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586766 80 - 5823884 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGTTTGGGC-CTGCCTT-C-TC----ACTTCCCTAGAGATTCAAGAAAAGCCCAGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67917 80 + 372756 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGCCTGGGC-CTGCTTT-C-CC----ACTGCCCTAGAGATTTGGGAAAAGCCCAGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303457 80 + 16356641 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGCCTGGGC-CTGCTTT-C-CC----ATTGCCCTAGAGATCTGGGAAAAGCCCAGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172527 80 + 1231380 CCAGCCTTTCCTGAAGGCCCCCGACAGGGCTGCCTGGGC-CTGCTTT-C-CC----ACTGCCCTAGAAATCTGGGAAAAGCCCAGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704521 80 + 11732439 CCAGCCTCTCCTGAAGACCCCCGACAGGGCTGCCTGGGC-CTGCTTT-C-CC----ACTGCCCTAGAGATTTGGGAAAAGCCCAGAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1879802 81 - 2029793 CCAGCCTCTCCTGGAGACCTCCCGCGGGGCTGTCTGGGC-CTGCTTTCC-TC----GCTGCCCTAGAGATTTTGGAAAAGCCCAGAA i proCoq1.NW_012150197v1 I 185 I 100 s otoGar3.GL873542 22867355 80 + 22939663 CCAGCCTCTCCTGAAGACC-CCAGCAGGGCAGTCTGGGC-CTGCTTTCC-TC----CTTGCCCTGGAAATTCTGCAAAAACCTAGAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811697 76 + 182113224 CCAGCTACTCCCAAGGACT-CTGACAGGGCTGCC-GGGC-CTGCTTT-T-CCTATTTCCACTCTAGATA-CTAAGAAAAGCT----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47625779 73 + 47698779 ----TCTCTCCCGAGGACCCGGCACAGG---GTCTGGGC-CTGCTGG-CACC----TCTGCCCTGGAGATGTGCGAGCGGCCCGCG- i canFam3.chr24 I 7 C 0 s dasNov3.JH569290 265010 79 - 397369 CCAGCCTTACGCAAGGACCCCTGGT-GGGTGGCCTGGGCACTGCTTC-C-TC----ACTGCCCTGGAGATTTAGGAAAAGCCCACA- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56884850 514 + 57149010 I a score=1138722.000000 s hg38.chr20_KI270870v1_alt 132313 120 + 183433 CCGACCAGGGAACGTAAGCCCTGCCGTGGCTCGGCAG------------------GCCACAGGCTGTGCGGCTCTTGCTAAATGAACTGAA--CGCTGATAATG-A-A-GAGAAAGCTCCTTCCCC-TCCCCTCTCCTGTCACG s panTro5.chr20 66458405 120 + 66533130 GCGACCAGGGAACGTAAGCCCTGCCGTGGCTCGGCAG------------------GCCACAGGCTGTGCGGCTCTTGCTAAATGAACTGAA--CGTTGATAATG-A-A-GAGAAAGCTCCTTCCCC-TCCCCTCTCCTGTCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133452 120 + 62195757 GCGACCAGGAAATGTAAGCCCTGCCGTGGCTCGGCAG------------------GCCGCAGGCTGTGCGGCTCTTGCTAAATGAACTGAA--CGTTGATAATG-A-A-GAGAAAGCTCCTTCCCC-TCCCCTCTCCTGTCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522524 120 - 578057 CCGACCAGGGAACGTAAGCCCTGCCGTGGCTCGGCAG------------------GCCACAGGCTGTGCGGCTCTTGCTAAATGAACTGAA--CGTTGATAATG-A-A-GAGAAAGCTCCTTCCTC-TCCCCTCTCCTGTCACG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110044885 120 - 110113093 CCCACCAGGGAACGTAAGCCCTGCCGTGGCTCGGCAG------------------GCCACAGGCTGTGCGGCTCTTGCTAAATGAACTGAA--CGCTGATAATG-A-A-GAGAAAGCTCTTTGCCC-TCCCCTCTCTCGTCACG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778692 120 - 92844088 CCGACCAGGGAATGTAAGCCCTGCCGTGGCTCAGCAG------------------GCCACAGGCTGTGCGGCTCTTGCTGAATGAACTGAA--CGCTGATGATG-A-A-GAGAAAGCTCCCTGTCC-TCCCCTCTCCTGTCACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444747 120 + 96509753 CCGACCAGGGAATGTAAGCCCTGCCGTGGCTCAGCAG------------------GCCACAGGCTGTGCGGCTCTTGCTGAATGAACTGAA--CGCTGATGATG-A-A-GAGAAAGCTCCCTGTCC-TCCCCTCTCCTGTCACG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915706 120 - 16982598 CCGACCAGGGAATGTAAGCCCTGCCGTGGCTCAGCAG------------------GCCACAGGCTGTGCGGCTCTTGCTGAATGAACTGAA--CGCTGATGATG-A-A-GAGAAAGCTCCTTGTCC-TCCCCTCTCCTGTCATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718502 104 - 3785965 CCGACCAGGGAATGGAAGCCCTGCCGTGGCTCAGCAG------------------GCCACAGGCTGCGCGGCTCTTGCTGAATGAACTGAA--CGCTGATAA-------------------TGTCC-TCCCCTCTCCTGTCATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296729 120 - 90373283 CCAACCAGGGAATGTAAGCCCTGCCGTGGCTCGGCAG------------------GCCACAGGCTGTGCGGCTCTTGCTGAATGAACTGAA--CGCTGATAATG-A-A-GAGAAAGCCCCTTGTCC-TCCCCTCTCCTGTCATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111025 120 - 179258 CCGACCAGGGAATGGAAGCCCTGCCGTGGCTCAGCAG------------------GCCACAGGCTGCGCGGCTCTTGCTGAATGAACTGAA--CGCTGATAATG-A-A-GAGAAAGCTCCTTGTCC-TCCCCTCTCCTGTCATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586846 120 - 5823884 CCGACCAGGGAATGTAAGCCCTGCCGTGGCTCGGCAG------------------GCCGCAGGCTGTGTGGCTCTTGCTGAATGAACTGAA--CGCTGATAATG-A-A-GAGAAAGCTCCTTGTCC-TCCCCTCTCCTGTCATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 67997 108 + 372756 TCGGCCAAGAAATGTAAGCCCTGTCGTGGCTCGACAG------------------GCCGCAGGCTGTGCGTCTCTTGCTAAA--------------TGATAATG-A-A-GAGAAAGCTCCTTGGCC-TCCCTCCTCCTGTGATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303537 108 + 16356641 TCGTCCAAGAAATGTAAGCCCTGCCGTGGCTCGACAG------------------GCCACAGGCTGTGCGTGTCTTGCTAAA--------------TGATAATG-A-A-GAGAAAGCTCCTTGCCC-TCCCTCCTCCTGCGATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172607 108 + 1231380 TCCGCCAAGAAATGTAAGCCCTGCCATGGCTCGGCAG------------------GCCGCAGGCTGTGTGTCTCTTGCTAAA--------------TGATAATG-A-A-GATAAAGCTCCTTGCCC-TCCCTCCTCCTGCGATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704601 106 + 11732439 TTGGCCGAGAAATGTAAGCCCTGCCGTGGCTCAACAG------------------AC--CAGGCTGTGCGTCTCCTGCTGAA--------------TGATGACG-A-A-GGGAAAGCTCCTTGCCC-TCCCTCCTCCTGCAATG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22867435 138 + 22939663 TTGACTGTGGCTTGTAAGTCTTGCCATGGCTCAGTGAGTTGTAGGTGATATGGCTGCTGTAGGTGGCGTGACTGCTGCGGAATGATCTAGATGTGCTGGTGGTG-G-A-GAGGAAGCTC-TTCCTC-TCTTTCATCCTGTGAT- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811773 103 + 182113224 --------------GGAACTTGGCTGTGACTTAGT-G------------------GCTATAGGCTACGGGGCTCTTGTCAAATGAACTGT---CACTAACAATACC-A-GAGAATGTCTCTTG--C-TTCCCACCCCAGCCCTG i mm10.chr2 C 0 I 4 s canFam3.chr24 47625852 121 + 47698779 CTGGCCTTGGCTTCTACGTCTTGCTGCGGCTCGG-GG------------------GCTTCGGGCTGTGGGGCTCTGGCTAGGGCACCTGGG--TGCTGGCGGTG-A-ATGAGGAAACTCTCTGCCCTTCCCTCCTCCTGTGCCC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 265089 106 - 397369 CTGCCTGTGGCTCATCAATCCCA-TGTGGC-CAGTGG------------------GCCGCAGACGGTGTGGCTTTTGCTAAATGAACTGGA--CATTGATGATG-ACA-GATGA-----------C-CACCCTCCGCTGCCA-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1879883 100 - 2029793 I e micMur3.chr18 56884850 514 + 57149010 I a score=18380.000000 s hg38.chr20_KI270870v1_alt 132433 1 + 183433 C s panTro5.chr20 66458525 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133572 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522644 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045005 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778812 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444867 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915826 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718606 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296849 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111145 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586966 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68105 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303645 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172715 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704707 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56885364 1 + 57149010 C i micMur3.chr18 I 514 C 0 s otoGar3.GL873542 22867573 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811880 1 + 182113224 C i mm10.chr2 I 4 C 0 s canFam3.chr24 47625974 1 + 47698779 C i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 265195 1 - 397369 C i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1879883 100 - 2029793 I a score=357359.000000 s hg38.chr20_KI270870v1_alt 132434 23 + 183433 TCCAGCTGCTTCTGCCTTGGCCC s panTro5.chr20 66458526 23 + 66533130 TCCAGCTGCTTCTGCCTTGGCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133573 23 + 62195757 TCCAGCTGCTTCTGCCTTGGCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522645 23 - 578057 TCCAGCTGCTTCTGCCTTGGCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045006 23 - 110113093 TCCAGCTGCTTCTGCCTTGGCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778813 23 - 92844088 TCCAGCTGCTTCTGCCTTGGCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444868 23 + 96509753 TCCAGCTGCTTCTGCCTTGGCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915827 23 - 16982598 TCCAGCTGCTTCTGCCTTGGCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718607 23 - 3785965 TCCAGCTGCTTCTGCCTTGGCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296850 23 - 90373283 TCCAGctgcttctgccttggccc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111146 23 - 179258 TCCAGCTGCTTCTGCCTTGGCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586967 23 - 5823884 TCCAGCTGCTTCTGCCTTGGCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68106 23 + 372756 TCCGGCTGCTTCTGCTTTGGCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303646 23 + 16356641 TCCGGCTGCTTCTGCTTTGGCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172716 23 + 1231380 TCCGGCTGCTTCTGCTTTGGCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704708 21 + 11732439 TCCGGCTGCTTCTGC--TAACCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56885365 23 + 57149010 TCCAGCTGCTTCTGCCTTGGTCC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1879983 23 - 2029793 TCCAGCTGCTTCTGCCTTGGCCC i proCoq1.NW_012150197v1 I 100 I 137 s otoGar3.GL873542 22867574 23 + 22939663 TCCAGCTGCCACAGCTTTGGCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811881 21 + 182113224 CTTGGCTG-TTCTGTTTCTCCC- i mm10.chr2 C 0 I 1 s canFam3.chr24 47625975 23 + 47698779 CGCTGCTGCGTCTGTCTGGTCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 265196 19 - 397369 TCCCACTGCTGCTGGCTTG---- i dasNov3.JH569290 C 0 C 0 a score=26220.000000 s hg38.chr20_KI270870v1_alt 132457 2 + 183433 TG s panTro5.chr20 66458549 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133596 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522668 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045029 2 - 110113093 TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778836 2 - 92844088 TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444891 2 + 96509753 TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915850 2 - 16982598 TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718630 2 - 3785965 TG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296873 2 - 90373283 tg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111169 2 - 179258 TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586990 2 - 5823884 TG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68129 2 + 372756 TG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303669 2 + 16356641 TG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172739 2 + 1231380 TG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704729 2 + 11732439 TG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56885388 2 + 57149010 TG i micMur3.chr18 C 0 I 148 s otoGar3.GL873542 22867597 2 + 22939663 TG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811903 1 + 182113224 T- i mm10.chr2 I 1 C 0 s canFam3.chr24 47625998 2 + 47698779 TG i canFam3.chr24 C 0 I 1 e proCoq1.NW_012150197v1 1880006 137 - 2029793 I e dasNov3.JH569290 265215 0 - 397369 C a score=1456279.000000 s hg38.chr20_KI270870v1_alt 132459 139 + 183433 ATGCCCTCC-------------C-----------C--CCATGC------TCA---TGCCTTCTCTTTGCTGGGCTCACCCGTTTCTGCTTCTGTACCTCCCTGCCCCTACCTAACACATGGGCAGGGCAGGCCCTGCAGGCACCAGCTA----TAG-CTTGCTGGACAGTCCTGCACAA- s panTro5.chr20 66458551 139 + 66533130 ATGCCCTCC-------------C-----------C--CCATGC------TCA---TGCCTTCTCTTTGCTGGGCTCACCCGTTTCTGCTTCTGTACCTCCCTGCCCCTACCTAAAACATGGGCAGGGCAGGCCCTGCAGGCACCAGCTA----TAG-CTTGCTGGACAGTCCTGCACAA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133598 139 + 62195757 ATGCCCTCC-------------C-----------C--CCATGC------TCA---TGCCTTCTCTTTGCTGGGCTCACCCGTTTCTGCTTCTGTACCTCCCTGCCCCTACCTAAAACATGGGCAGGGCAGGCCCTGCAGGCACCAGCTA----TAG-CTTGCTGGACAGTCCTGCACAA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522670 139 - 578057 ATGCCCTCC-------------C-----------C--CCATGC------TCA---TGCCTTCTCTTTGCTGGGCTCACCCGTTTCTGCTTCTGTACCTCCCTGCCCCTACCTAACACATGGGCAGGGCAGGCCCTGCAGGCACCAGCTA----TGG-CTTGCTGGACAGTCCTGCACAA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045031 140 - 110113093 ATGCCCTCC-------------C-----------CCTCCATGC------TCA---CGCTTTCTCTTTGCTGGGCTCACCCGTTTCTGCTTCTGTACCTCCC-GCCCCTACCTAACGCATGGGCAGGGCAGGCCCTGCAGGCACCAGCTG----TAG-CCTGCTTGACAGTCCTGCACAA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778838 137 - 92844088 ATGCCCTTC-------------C-----------T--CCATGC------TTA---TGCCTTCTGTTTGCTGGGCTCACCCGTTTCTGCTTCTGCACCTCCCTGCCCCTACCTAACACATGGGCAGGGCAGGCCCTGCAGGCACCAGC------TAG-CCTGCTTGACCGTCCCGCACAG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96444893 136 + 96509753 ATG-CCTTC-------------C-----------T--CCATGC------TTA---TGCCTTCTGTTTGCTGGGCTCACCCGTTTCTGCTTCTGCACCTCCCTGCCCCTACCTAACACATGGGCAGGGCAGGCCCTGCAGGCACCAGC------TAG-CCTGCTTGACCGTCCCGCACAG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915852 137 - 16982598 ATGCCCTTC-------------C-----------T--CCATGC------TTA---TGCCTTCTGTTTGCTGGGCTCACCCGTTTCTGCTTCTGCACCTCCCTGCCCCTACCTAACACATGGGCAGGGCAGGCCCTGCAGGCACCAGC------TAG-CCTGCTTGACCGTCCCGCACAG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718632 137 - 3785965 ATGCCCTTC-------------C-----------T--CCATGC------TTA---TGCCTTCTGTTTGCTGGGCTCACCCGTTTCTGCTTCTGCACCTCCCTGCCCCTACCTAACACATGGGCAGGGCAGGCCCTGCAGGCACCAGC------TAG-CCTGCTTGACAGTCCCGCACAA- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90296875 133 - 90373283 atgcccttc-------------c-----------t--ccctgc------tta---tgccttctgtttgctgggctcacctgtttctgcttctgcACCTCCCTGCCCCTACCTAACACATGGGCAGGGCAGGCCCTGCAGGCACC----------AG-CCTGCTTGACAGTCCCACACAA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111171 137 - 179258 ATGCCCTTC-------------C-----------T--CCATGC------TTA---TGCCTTCTGTTTGCTGGGCTCACCCGTTTCTGCTTCTGCACCTCCCTGCCCCTACCTAACACATGGGCAGGGCAGGCCCTGCAGGCACCAGC------TAG-CCTGCTTGACAGTCCCGCACAA- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5586992 137 - 5823884 ATGCCCTTC-------------C-----------T--CCATGC------TTA---TGCCTTCTGTTTGCTGGGCTCACCCGTTTCTGCTTCTGCACCTCCCTGCCCCTACCTAACACATGGGCAGGGCAGGCCCTGCAGGCACCAGC------TAG-CCTGCTTGACAGTCCCGCACAG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68131 132 + 372756 ATGCCCT-C-------------C-----------T--CCATGC------CCA---TACCTTCCCTTTGCTGGGCCCACCTGTTTCTGCTTCTGCACCTCTCTGCC----CATAATGCGTGGGCAGGGCAGGCCCCGCAGGCACACGC------TAG-CCTGCTTGACAGCCCTGCACAG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303671 134 + 16356641 ATACCCTCC-------------C-----------T--CCATGC------CCT---TACCTTCCCTTTGCTGGGCCCACCTGTTTCTGCTTCTGCACCTCCCTGCC----CATAATGCGTGGGCAGGGCAGGCCCCTCAGGCACACGA------TAGCCCTGCTTGACAGCCCTGCACAG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172741 133 + 1231380 ATGCCCTCC-------------C-----------T--CCGTGC------CCA---TACCTTCCCTTTGCTGGGCCCACCTGTTTCTGCTTCTGCACCTCCCTGCC----CATAATGTGTGGGCAAGGCAGGCCCCGCGGGCACACGC------TAG-CCTGCTTGACAGCCCTGCACGG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704731 120 + 11732439 ---------------------------------------GTGC------CCA---CACCTTCCCTTCGCTGGGCCCACCTGTTTCTGCTTCTGCACCTCCCTGCC----CATAGTGTGTGAGCAGGGCAGGCCCTGCAGGCACACAC------TAG-CCTGCTTGACAGCCCTGCACGG- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22867599 144 + 22939663 GTGGCCTCCCAGACACGTTCTGC-----------T--CCATGG------CCATTGTGCCTTCTCTTTGCTAGACTCAACCCTT--CACTTCAGCACCTCCCTGCCCC-----AAGGCATG-GCAGGGTAGG-CCTGCGGGCCCCAGC------TAG-CTTGCTTGACTGTCCTGCACAG- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181811904 143 + 182113224 GTGCCCTCC-------------CAG--------TC--CTACGCAGTGCTTTT---TGCCTTCTCTCTGCTGG----ATCTCTCCCTGCTTCTGTGCCTCTCTGCC-----TTAACACATGTGCAGACCAGGTTCTACGGGCACCCACAACTGTCAG-TTTGCCTGACAGTCCTCAGAAG- i mm10.chr2 C 0 C 0 s canFam3.chr24 47626001 139 + 47698779 GGGTCCCCC-------------CGGAGCTGCCTGC--CCATGC------TCA---T-CCCTCTCTTTGCTGAGCACCCCTCTTTCTGCTGCT---CCTCCCTGTC----CCTAACACACG-GCAGCCCAGGCTCTGTGGGCACCAAT------TAC-CCTGCTCAACAGCCCTGCTCAA- i canFam3.chr24 I 1 I 1 s dasNov3.JH569290 265215 123 - 397369 --ACCCCTC-------------C-----------T--CTGTGC------TCA---CCCCTTCCCTTGGCTGAGCCCCCTCGTCTCTGCTTCTGCTCCTTCCTGCCCTCACA------------AAGGCCGGCCTCATGGGCACCAGC------TCC-CCACTCTGACA-CCCTGTGCTAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1880006 137 - 2029793 I e micMur3.chr18 56885390 148 + 57149010 I a score=93584.000000 s hg38.chr20_KI270870v1_alt 132598 9 + 183433 CCAGGCGCA s panTro5.chr20 66458690 9 + 66533130 GCAGGCGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133737 9 + 62195757 CCAGGCGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522809 9 - 578057 CCAGGCGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045171 9 - 110113093 CCAGGCGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778975 9 - 92844088 CCAGGCGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96445029 9 + 96509753 CCAGGCGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915989 9 - 16982598 CCAGGCGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718769 9 - 3785965 CCAGGCGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297008 9 - 90373283 CCAGGCACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111308 9 - 179258 CCAGGCGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5587129 9 - 5823884 CCAGGCGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68263 9 + 372756 CCACGTGCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303805 9 + 16356641 CCAGGTGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172874 9 + 1231380 CCAGGTGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704851 9 + 11732439 CCAGGTGCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1880143 9 - 2029793 CCAGACGCC i proCoq1.NW_012150197v1 I 137 C 0 s otoGar3.GL873542 22867743 9 + 22939663 TCAGGCAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181812047 9 + 182113224 AGAGAAACA i mm10.chr2 C 0 C 0 s canFam3.chr24 47626141 9 + 47698779 TGTGACGCG i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 265338 6 - 397369 TGAGGC--- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56885390 148 + 57149010 I a score=4670853.000000 s hg38.chr20_KI270870v1_alt 132607 332 + 183433 AGCACCCAGAGGTTTCC--AGGGGTCAGTGTCCTCCTGGGGCTGGAGTCAGGGACTGTTACTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCTC-----AGCCTGTGTGACCCTGAGCCATGGGGAGCTCCTCCTGGGCACCGGGGCCGAGCTGAG------------------GCCTTGGAGGAAGGGGGTCCCATTCTTGTCTCCTCAGGTCAC-CTCTCTCCAGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATCCAGGTCAACACACCCTGGCTTATTCCATTCTGGGG-CCAGACAGGATCCTGGGCACTGGTGC------CTCTAAGATGAGGAAA s panTro5.chr20 66458699 332 + 66533130 AGCACCCAGAGGTTTCC--AGGGGTCAGTGTCCTCCTGGGGCTGGAGTCAGGGACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCTC-----AGCCTGTGTGACCCTGAGCCATGGGGAGCTCCTCCTGGGCACCGGGGCCGAGCTGAG------------------GCCTTGGAGGAAGGGGGTCCCATTCTTGTCTCCTCAGGTCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATCCAGGTCAACACACCCTGGCTTATTCCATTCTGGGG-CCAGACAGGATCCTGGGCACTGGTGC------CTCTAAGATGAGGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62133746 332 + 62195757 AGCACCCAGAGGTTTCC--AGGGGTCAGTGTCCTCCTGGGGCTGGAGTCAGGGACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCTC-----AGCCTGTGTGACCCTGAGCCATGGGGAGCTCCTCCTGCGCACCTGGGCCGAGCTGAG------------------GCCTTGGAGGAAGGGGGTCCCATTCTTGTCTCCTCAGGTCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATCCAGGTCAACACACCCTGGCTTATTCCATTCTGGGG-CCAGACAGGATCCTGGGCACTGGTGC------CTCTAAGATGAGGAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 522818 332 - 578057 AGCACCCAGAGGTTTCC--AGGGGTCAGTGTCCTCCTGGGGCTGGAGTCAGGGACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCTC-----AGCCTGTGTGACCCTGAGCCATGGGGAGCTCCTCCTGGGCACCGGGGCCGAGCTGAG------------------GCCTTGGAGGAAGGGGGTCCCGTTCTTGTCTCCTCAGGTCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATCCAGGTCAACACACCCTGGCTCATTCCATTCTGGGG-CCAGACAGGATCCTGGGCACTGGTGC------CTCTAAGATGAGGAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045180 337 - 110113093 AGCACCCAGAGGTTTCC--AGGGGTCGGTGTCCTCCTGGGGC-GGACTCAGGGACTGTTGCTGCCTTTGGTTTTCGTGCCTCCAGTTGCGC--TG-TGACTCCAC-----AGCCTGTGTGACCCTGAGCCGTGGGGAGCTCCTCCTGGGCACCGGGGTCAAGCTGAG------------------GCCTTGCAGGAAGGGCATCCCATTCCTGTCTCCTCAGGTCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CCCCCCAACATAGGCCTCTGTGTT-GGGGGCCCTGAATCCAGATCAACACACCCTGGCTCATTCCATTCTGGGG-CCAGACAGGATCCTGGGCACTGGTGC------CTCTAAGATGAGGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92778984 332 - 92844088 AGCACCCAGAGGTTTCC--AGGTATCAGTGTCCTCTTGGGGTTGGAGTCAGGAACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCAC-----AGCCTATGTGACCCTGAGCCACGGGGAACACCTCCTGGGCACCGGGGTTGAGTTGAA------------------GCCTTGGAGGAAGGGGGTCCCATTCTTGTCTCCTCAGGGCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATTCAGGTCAACACACCCCATCTCATTCCATTCTGGGG-CCAGACAGGATCCTGGGCACTGGTGC------CTCTAAGATGAGGAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96445038 332 + 96509753 AGCACCCAGAGGTTTCC--AGGTATCAGTGTCCTCTTGGGGTTGGAGTCAGGAACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCAC-----AGCCTATGTGACCCTGAGCCACGGGGAGCACCTCCTGGGCACCGGGGTTGAGTTGAA------------------GCCTTGGAGGAAGGGGGTCCCATTCTTGTCTCCTCAGGGCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATTCAGGTCAACACACCCCATCTCATTCCATTCTGGGG-CCAGACAGGATCCTGGGCACTGGTGC------CTCTAAGATGAGGAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16915998 332 - 16982598 AGCACCCAGAGGTTTCC--AGGTATCAGTGTCCTCTTGGGGTTGGAGTCAGGAACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCAC-----AGCCTATGTGACCCTGAGCCACGGGGAGCACCTCCTGGGCACCGGGGTTGAGTTGAA------------------GCCTTGGAGGAAGGGGGTCCCATTCTTGTCTCCTCAGGGCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATTCAGGTCAACACACCCCATCTCATTCCATTCTGGGG-CCAGACAGGATCCTGGGCACTGGTGC------CTCTAAGATGAGGAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3718778 332 - 3785965 AGCACCCAGAGGTTTCC--AGGTATCAGTGTCCTCTTGGGGTTGGAGTCAGGAACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCAC-----AGCCTATGTGACCCTGAGCCACGGGGAGCACCTCCTGGGCACTGGGGTTGAGTTGAA------------------GCCTTGGAGGAAGGGGGTCCCATTCTTGTCTCCTCAGGGCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATTCAGGTCAACACACCCCATCTCATTCCATTCTGGGG-CCAGACAGGATCCCGGGCACTGGTGC------CTCTAAGATGAGGAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297017 332 - 90373283 AGCACCCAGAGGTTTCC--AGGTATCAGTGTCCTCTCGGGGTTGGAGTCAGGGACTGTTACTGCCTTCGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCAC-----ACCCTATGTGACCCTGAGCCACGGGGAGCACCTCCTGGGCACCGGGGTTGAGCTGAA------------------GCCTTGGAGGAAGGGGGTCCCATTCTTGTCTCCTCAGGGCAC-CCCTCTCCGGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATTCAGGTCAACACACCCCGTCTCATTCCATTCTGGGG-CCAGACAGGATCCCAGGCACTGGTGC------CTCTAAGATGAGGAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111317 332 - 179258 AGCACCCAGAGGTTTCC--AGGTATCAGTGTCCTCTTGGGGTTGGAGTCAGGAACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCAC-----AGCCTATGTCACCCTGAGCCACGGGGAGCACCTCCTGGGCACCGGGGTTGAGTTGAA------------------GCCTTGGAGGAAGGGGGTCCCATTCTTGTCTCCTCAGGGCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CATAGGCCTCTGTGTT-GGGGGCCCTGAATTCAGGTCAACACACCCCGTCTCTTTCCATTCTGGGG-CCAGACAGGATCCCGGGCACTGGTGC------CTCTAAGATGAGGAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5587138 338 - 5823884 AGCACCCAGAGGTTTCC--AGGTATCAGTGTCCTCTTGGGGTTGGAGTCAGGGACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGTGC--TG-TGACTCCAC-----AGCCTCTGTGACCCTGAGCCACGGGGAGCACCTCCTGGGCACCGGGGTTGAGCTGAG------------------GCCTTGGAGGAAGGGAGTCCCATTCTTGTCTCCTCAGGGCAC-CCCTCTCCGGGGGTG--TCCCTCCCT-CC------CATAGCCCTCTGTGTT-GGGGGCCCTGAATTCAGGTCAACACACCCTGTCTCATTCCATTCTGGGG-CCAGACAGGATCCCGGGCACTGGTGCCCCTAACCCTAAGATGAGGAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68272 334 + 372756 AGCACTCAGAGGTTTCC--AGGTATGAGTGTCCTCTTGGGGCCGGAGTCAGGGACTGTTACTGCGTTTGGTTTTCATGCCTCCAGTTGAGCTGTG-TGACTCTGC-----AGCCTGTGTGACCCTGAGCCATGGGGAGCTCATCTTGGGCACCGGGACTGAGCTGAG------------------GCCTTGGAGGAAGGGGGTCTCATTCTTGTCTCCTTAGGTCAC-CCCTCTCCAGGGGTG--TCCCTCCCC-AC------CACAGGCCTCTTTGTT-GGGGGCCCTGATTCTAGGCCAACACACCCTGGCTCATTCCATTCTGGGA-CCAGACAGGAGCCTGGACGCTGGTGC------CTCTAAGATAAGGAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16303814 332 + 16356641 AGCACCTAGAGGTTTCC--AGGTATGAGTGTCCTCTTGCGGCTGGAGTCAGGGACTGTTATTGCCTTTGGTTTTCATGCCTCCAGTTGAGC--TG-TGACTCCAC-----AGCCTGTGTGACCCTGAGCCATAGGGAGCTCGTCTTGGGCACCGGGATTGAGCTGAG------------------GCCTTGGAGGAAGGGGGTCTCATTCTTGTCCCCTTAGGTCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CACAGGCCTCTGTGTT-AGGGGCCCTGATTCCAGGCCAACACACTCTGGCTCATTCCATTCTGGGA-CCGGACAGGAGCCCAGGCACTGGTGC------CTCTAAGATGAGGAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1172883 331 + 1231380 AGCACCCAGAGGTTTCC--AGGTATGAGTGTCCTCTTGGGGCCGGAGTCAGGGACTGTTACTGCCTTTGG-TTTCATGCCTCCAGTTGAGC--TG-TGACTCCAT-----AGTCTGTATGACCCTGAGCCATGGGGAGCTCGTCCTGGGCACTGGGATTGAGCTGAG------------------GCCTTGGAGGAAGGGGGTCTCATTATTTTCTCCTTAGGTCAC-CCCTCTCCATGGGTG--TCCCTTCCT-CC------CACAGGCCTCTGTGTT-GGGGGCCCTGATTCCAGGCCAACACACCCTGGCCCATTCCATTGTGGGG-CCGGACAGGAGCCTGGGCACTGGTGC------CTCTAAGGTGAGGAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2704860 332 + 11732439 AGCACCCAGAGGTTTCC--AGGTATGAGTGTCCTCTTGGGGCCGGAGTCAGGGACTGTTATCACCTTTGGTTTTCGTGCTTCCAGTTGAGC--TGTTGACTTCAC-----AGCCTGTGTGACCCTGAGCCATGGGGAGCTCGTCCTGGGCACCAGGATTGAGCTGAG------------------GCCTTGGAGGAAGGGGGTCTCATTCTTGTCTCCTTAGGTCAC-CCCTCTCCAGGGGTG--TCCCTCCCT-CC------CACAGGCCTCTGTGTT-GGGGGCCCTGATTCCAGGCCAACACACCCTGGCTCATTCCATTCTGGGG-CCAGACAGGAGCCCGGGC-CTGGTGC------CTCTAAGATGAGGAAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56885538 333 + 57149010 AGCACTCAGAGGTTTCC--GGGTGTCAGTGTCCTCGTGGGGCTGGAGTCTGGGACCGTGGCTGCCTTTGGCTTTCCTGCCTTCAGCTGGGCTGTG-TGACCTCCCATCGCAGCCAGTGGGA-CCTGAGCTCA-GGAAGCTCGTCCTGGGCTCCGGGGTTGAGCTGAG------------------GCCTTGGAGGAAAGAGGTCCCACTCTTG-CTCCTCAGGTCAC-C-CTCTCCAGGGGTG--CCCCTCTGT-CC------TG-GGGCTTCTGTGTT-GGGGTCTCTGATTCCAGGCCAACGCTCCCTGGCATGTTCTTTTCTGGGG-CCAGACAGTAGCC-AGGCACTGGTGC------CTCTAACATGAAGAAA i micMur3.chr18 I 148 C 0 s proCoq1.NW_012150197v1 1880152 332 - 2029793 AGCACTCAGAGGTTTCC--AGGTATCAGTGTCCTCATAGGGCTGGAGTCAGGGACTGTTCCTCCCTTTGGCTTTCGTGTCTTCAGCTGGGCTATG-TGACCTCACATCACAGCCTGTGGGACCCTGAGCTGA-GGAAGCTTGTCCTGCGCATTGGGGCTGAGCTGAG------------------GCCTTGGAGGAAGGAGGTCCCACTCTTG-CTCCTCAGGTCAC-C-CTCTCCA-GGATG---CTCTCTGT-CC------TGTGGGCCCCTGCGTT-GGGGTCTCTGAATCCAGGACAAAGCTCCCTGGCACATTCTTTTCTGGGG-CCAGACAGTAGCC-AGGCACTAGTGC------CTCTAA-ATGAAGACA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22867752 301 + 22939663 AGCACCCAGAGGGTTTC--AGGCATCAGTGTCCTC-TGGGGCTGGAGTCAGGGACTGCTGCTGCCTTTGGCTTTCATTCCCTCCATTGGGC--TG-TCATCTCACATCATAGCCTGTGTGACCCTGAGCTGA----------------ATTCTGGGGTTATGCT----------------------------------GAGGTCCCACTCTTGTCTCCTCAGGTCAT-C-CTCTTCAGGGCTG--TCCCTCCCA-GC------TG-TGGCTTCTGTATTGGGGGTCTATGAATCTAGGCCAAAGCTCCTTGGCACATT-TTGTTTGGGG-CCCGACAGGAGTC-AGGCACTGGTGC------CTCTAAGATGAAGAAA i otoGar3.GL873542 C 0 I 869 s mm10.chr2 181812056 322 + 182113224 AGCACCCAGAGGTTTCC--AGGCATC--TGTTCTCTTGGAGCTGGAACTAGTGCCT-CCATTGTTTCTGGCTTTCATTTTCTCTGTCGATC--TG-TGACACTAC-----AGCCGTCATGATCCCGAGCTGTGGTTACCTTATTCAGGTGACCAGAGCTGAGTAGAG------------------ACATTGGAAGAAGGAGATACTATCCTGTTGTTC----AGTCC-CTCACAACTGGGCCGGAGCCCTCCCT-CT------CACAGTCCTTTGTTAT-AGGGGCTCTGAATCCAGGCCAAGACTCCCTGGA----TCTGATTTAGGA-CCAGATAGGTGTG-GGGTACTAGTGC------CTTTTGGACAAGGAGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47626150 283 + 47698779 AGCGCCCAGCAGTTTCCCAGGGTATCAGTGTCCTCTCGGGGCGAGATCTGGGGACTGCCATTGCCTTTGGGTTTTGCGCCTTCAGTTGAGC--TG-TGACATCGC-----CGCC-GTGCAGTGCTG----------------CCCTGGGCTC----------------------------------------GGGAAGGAGGTCTTCCTCTTGTCATCTCAGGTCACTCCCCCTCTGGGGGTG--TTCATCTCGAAC------CTTGGGCCTCCATATT-GGACGCCCCGAATCTAGG--------------CTCATTCCGTTCTGGGG-CCAGACGGGAGCCGAGGTCCTGGAGC------CTCTAAGAGGAGCAGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 265344 311 - 397369 ------------TTCCC--AGGTTTC--TCTTTCCTTGTGGCTGGAACCAGGCACTGCCACTGCCTTGGCTATTCGTGCCTG-GTCTGAGC--TG-TGACATCAC-----AGCCACAGG----CCGAGCC-CAGGGTGCTCATC-AGGGCCCATGGACTGAGCCGAGCTGAAGGCTCTGGCAGAAACTTTGGTGGGAGAAGGACCTGC-CTTGTC-CCTCAGCTCTC-CCCTCTCCAAGGGCA--T-CGTCCTT-CC------CATGGGCCTCAGT--T-GGGGACCCTGAATCCAG-----------TTGGCTCATCCCATCCCGGGGTCCAGTTGGAAGCAGAGAC---GGTGT------CTCTAAGATGAGGGGT i dasNov3.JH569290 C 0 C 0 a score=233710.000000 s hg38.chr20_KI270870v1_alt 132939 20 + 183433 TGAACTTGCTGAAGGCTTCT s panTro5.chr20 66459031 20 + 66533130 TGAACTTGCTGAAGCCTTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134078 20 + 62195757 TGAACTTGCTGAAGCCTTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523150 20 - 578057 TGAACTTGCTGAAGGCTTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045517 20 - 110113093 TGAAATTGCTGAAGGCTTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779316 20 - 92844088 TGAAATTGCTGAAGGCTTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96445370 20 + 96509753 TGAAATTGCTGAAGGCTTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916330 20 - 16982598 TGAAATTGCTGAAGGCTTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719110 20 - 3785965 TGAAATTGCTGAAGGCTTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297349 20 - 90373283 TGAAATTGCTGAAGGCTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111649 20 - 179258 TGAAATTGCTGAAGGCTTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5587476 20 - 5823884 TGAAATTGCTGAAGGCTTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68606 20 + 372756 TGAAATTGCTCAAGGTTTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304146 20 + 16356641 TGAAATTGCTCAAGGCTTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173214 20 + 1231380 TGAAATTGCTCAAGGCTTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2705192 20 + 11732439 TGAAATTGCTCAAGGCTTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56885871 20 + 57149010 GGAAGTTGCCAAAGGTTTCT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1880484 20 - 2029793 TGAAGTCGCCAAAGGTTTCT i proCoq1.NW_012150197v1 C 0 C 0 s mm10.chr2 181812378 18 + 182113224 -TAGAATGCTAATAGCAGA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47626433 20 + 47698779 TGTTGCTGCCAAAGGCTCCC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 265655 19 - 397369 TGGAGGTACCCAGGCTCCC- i dasNov3.JH569290 C 0 C 0 e otoGar3.GL873542 22868053 869 + 22939663 I a score=547401.000000 s hg38.chr20_KI270870v1_alt 132959 36 + 183433 AGGGACCTTGGCTGGCTCAGACCTGGA-CAGAAAGCT s panTro5.chr20 66459051 36 + 66533130 AGGGACCTTGGCTGGCTCAGAGCTGGA-CAGAAAGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134098 36 + 62195757 AGGGACCTTGGCTGGCTCAGAGCTGGA-CAGAAAGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523170 36 - 578057 AGGGACCTTGGCTGGCTCAGAGCTGGA-CAGAAAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045537 36 - 110113093 AGGGACCTTAGCTGGCTCAGAGCTGGA-CAGAAAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779336 35 - 92844088 -GGGACCTTAGCTGGCTCAGAGCTGGA-CAGAAAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96445390 35 + 96509753 -GGGACCTTAGCTGGCTCAGAGCTGGA-CAGAAAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916350 35 - 16982598 -GGGACCTTAGCTGGCTCAGAGCTGGA-CAGAAAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719130 35 - 3785965 -GGGACCGTAGCTGGCTCAGAGCTGGA-CAGAAAGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297369 35 - 90373283 -GGGACCTTAGCTGGCTCAGAGCTGGA-CAGAAAGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111669 35 - 179258 -GGGACCGCAGCTGGCTCAGAGCTGGA-CAGAAAGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5587496 36 - 5823884 AGGGAGTTTAGCTGGCTCAGAGCTGGA-CAGAAAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68626 36 + 372756 AGGGACCTTAGCTGGCTCAGAGCTGGA-CAGAAAGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304166 36 + 16356641 AGGGACCTTAGCTGGCTCAGAGCCGGA-CAGAAAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173234 35 + 1231380 AGGGACCTTAGCTGGCTCAGAGCCAGA-CAGAAAG-G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2705212 36 + 11732439 AGGGACCTTAGCTGGCTCAGAGCTGGA-CAGAAAGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56885891 36 + 57149010 AGGGACCTGAGCTGGCTCGGAGAAGGA-CAGAAAGCT i micMur3.chr18 C 0 I 252 s proCoq1.NW_012150197v1 1880504 35 - 2029793 AGGGACCTGAGCTGGCTCGGAG-AGGA-CAGAAAGCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22868922 33 + 22939663 agaaAACTGAGCTGTCCTGG---AGGA-CAGAAAGCT i otoGar3.GL873542 I 869 C 0 s mm10.chr2 181812396 36 + 182113224 AGGGACTTGAGCTGATTTACACTAGGA-CAGAAATCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47626454 37 + 47698779 AGGGGCCTGAGCTGATTTAGAAAGAGAGAAGAAAGCT i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 265674 34 - 397369 -AGAACCTGAGCTGGATTAGAGC-GGA-CAGAGTGCT i dasNov3.JH569290 C 0 C 0 a score=565761.000000 s hg38.chr20_KI270870v1_alt 132995 55 + 183433 CTAGGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTCCCCTCTGGAGGCT s panTro5.chr20 66459087 55 + 66533130 CTAGGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTCCCCTCTGGAGGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134134 55 + 62195757 CTAGGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTCCCCTCTGGAGGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523206 55 - 578057 CCAGGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTCCCCTCTGGAGGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045573 55 - 110113093 CTAGGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTCCTCTCTGGAGGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779371 55 - 92844088 CTGAGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTTCTCTCTGGAGGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96445425 55 + 96509753 CTGAGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTTCTCTCTGGAGGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916385 55 - 16982598 CTGAGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTTCTCTCTGGAGGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719165 55 - 3785965 CTGAGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTTCTCTCTGGAGGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297404 55 - 90373283 CTGGGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTTCCCTCTGGAGGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111704 55 - 179258 CTGAGTCTCCCAGAGCC-CCC----ACCAGCAGTCTTGTCTCTGTTTCTCTCTGGAGGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5587532 55 - 5823884 CTGGGTCTCCCAGAGCC-CCC----ACCAGCAGCCTTGTCTCTGTTTCTCTCTGGAGGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68662 56 + 372756 ATAGGTCTCCTAGAGTCTCCC----AACAGCAGCCTTGGCTCCGTTCCTCAGTGGAGGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304202 56 + 16356641 GCAGGTAACCCAGAGCCTCCC----AACAGCAGCCGTGTCTCCGTTCCTCTGTGGAGGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173269 56 + 1231380 GTAGGTCTCCCATAGCCTCCC----AACAACAGCCTTGTCTCCGTTCCTCTGTGGAGGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2705248 56 + 11732439 GCAGGTCAACCAGAGCCTCCC----AACGGCAGCCTTGTCTCCATTCCTTTGTGGAGGCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1880539 55 - 2029793 TTAGGTCCTCCAGAGCC-CCC----AATGGCAGCCTTGACTCGGTCTCCCTGTGGAGGCT i proCoq1.NW_012150197v1 C 0 I 476 s otoGar3.GL873542 22868955 54 + 22939663 TTAGGTCTCCCATAGGC-CCT-----GTGGCAGCCTTGACTCAGTCTCCTTGTAGAGACC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181812432 34 + 182113224 -ATGGTTTTCCAGTGTC-C-------------------ACTCTGTTCTTCTCTAA----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47626491 58 + 47698779 CTAGAT-GCCTGGAGTC-CCCCCATCCTGCCAGCGTCCTCCTTGTCACTCTGGGGAGGCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 265708 16 - 397369 ---------CCAGA--C-CTC----A-----AGCCCT----------------------- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56885927 252 + 57149010 I a score=1894154.000000 s hg38.chr20_KI270870v1_alt 133050 212 + 183433 GGTCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCATGA------GGCCCTTCAGTTCCCACA-----GAGTGGGGTGCAGC----ATCTAAGTTTCCTTCCTGGAAGTTAATAGCTTCAACATAAGCATTTTCTG-AGGCTGAGATCACCACAGCAGCTGCACACATTGAC-------TTATTCATTCATTCTGCCG--CCCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT s panTro5.chr20 66459142 212 + 66533130 GGTCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCATGA------GGCCCTTCAGTTCTCACA-----GGGTGGGGTGCAGC----ATCTAAGTTTCCTTCCTGGAAGTTAATAGCTTCAACATAAGCATTTTCTG-AGGCTGAGATCACCACAGCAGCTGCACACATTGAC-------TTATTCATTCATTCTGCCG--CCCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134189 212 + 62195757 GGTCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCATGA------GGCCCTTCAGTTCTCACA-----GGGTGGGGTGCAGC----ATCTAAGTTTCCTTCCTGGAAGTTAATAGCTTCAACATAAGCATTTTCTG-AGGCTGAGATCACCACAGCAGCTGCACACATTGAC-------TTATTCATTCATTCTGCCG--CCCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523261 211 - 578057 GGTCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCATGA------GG-CCTTCAGTTCCCACA-----GGGTGGGGTGCAGC----ATCCCAGTTTCCTTCCTGGAAGTTAATAGCTTCAACATAAGCATTTTCTG-AGGCTGAGATCACCACAGCAGCTGCACACATTGAC-------TTATTCATTCATTCTGCCG--CCCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045628 210 - 110113093 GGTCTGGCCCCAGCAGCCAGGAGGA-------GTGTGCCCTCA------GGCCCTTCAGTGCCCACA-----GGGTGGGGTGCACC----GTCTCAGTTTCCTTCCTGGAAGTTAACAGCTTCAACATAAGCATTTTCTG-AGGCTTAGATC-CCGCAGCAGCTTCACACATTGAC-------TTATTCGTTCATTCTGCC---CCCACT-TTGTCCAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779426 211 - 92844088 GCCCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCCTCA------GGCCCTTCAGTTCCCACA-----GGGTGGGGTGCACC----ATCTCAGTTTCCTTTCTGGAAGTTAATAGCTTCAACATAAGCA-TTTCTG-AGGCTTAGATCACCACAGCCGATTCACACATTGAC-------TTATTCATTCATTCTGCCC--CTCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96445480 211 + 96509753 GCCCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCCTCA------GGCCCTTCAGTTCCCACA-----GGGTGGGGTGCACC----ATCTCAGTTTCCTTCCTGGAAGTTAATAGCTTCAACATAAGCA-TTTCTG-AGGCTTAGATCACCACAGCCGATTCACACATTGAC-------TTATTCATTCATTCTGCCC--CTCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916440 211 - 16982598 GCCCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCCTCA------GGCCCTTCAGTTCCCACA-----GGGTGGGGCGCACC----ATCTCAGTTTCCTTCCTGGAAGTTAATAGCTTCAACATAAGCA-TTTCTG-AGGCTTAGATCACCACAGCCGATTCACACATTGAC-------TTATTCATTCATTCTGCCC--CTCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719220 211 - 3785965 GCCCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCATCG------GGCCCTTCAGTTCCCACA-----GGGTGGGGTGCACC----ATCTCAGTTTCCTTCCTGGAAGTTAATAGCTTCCACATAAGCA-TTTCTG-AGGCTTAGATCACCACAGCCGATTCACACATGGAC-------TTATTCATTCATTCTGCCC--CTCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297459 212 - 90373283 GCCCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCGTCA------GGCCCTTCAGTTCCCACA-----GGGTGGGGTGCACC----ATCTCAGTTTCCTTCCTGGAAGTTAATAGCTTCAACATAAGCATTTTCTG-AGGCTTAGATCACCACGGCCGATTCACACATTGAC-------TTATTCATTCATTCCGCCC--CTCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111759 207 - 179258 GCCCTGGCCGCAGCAGCCAGGAGGA-------GTGTGTCATCG------GGCCCTTCAGTTCCCACA-----GGGTGGGGTGCGCC----ATCTCAGTTTCCTTCCTGGAAGTTAATAGCTTCCACATAAGCA-TTTCTG-AGGCTTAGCTCACCACAGCCGATTCACACATGGAC-------TTATGCATTCATTCTGCCC--CTCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAA----CAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5587587 212 - 5823884 GCCCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCATCA------GGCCCTTCAGTTCCCACA-----GGGTGGGGTGCACC----ATCTCAGTTTCCTTCCTGGAAGTTAATAGCTTCAACATAAGCATTTTCTG-AGTCTCAGATCACCACAGCCGATTCACACATTGAC-------TTATTCATTCATTCGGCCC--CTCACT-TTGTCTAGTCCTAGAAACCCAG-------------------GAAACACTCAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68718 223 + 372756 GGTCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCATCA------GGCCCTTCAGTTCCCACAAATGGGGACAGGGTGCACC----ATCTCAATTTCCTTTCTGGAAGTTAATAGCTTCAACATAAGCATTTTCTG-AGGCTTAGATCACCACAGCAGattcattcattaat-------ttattcattcattcTGCCCCACCCACA-TTGTCTAGTCCTAGGAACCCAG---------------AGATGAAACACTCAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304258 222 + 16356641 GGTCTGGCCCCAGCAGCCAGGAGGA-------GTGTGTCATCA------GCCCCTTCAGTTCCCACAAATGGGGATAGGGTGCACC----ATCTCGATTTCCTTTCTGGAAGTTAAGAGCTTCAACATAAGCATTTTCTG-AGGCTTAGATCACCACAGCAGATTCACACATTAAT-------TTATTCATTCATTTT-CCCCACCCACG-TTGTCTAGCCCTGGAAACCCAG---------------AGATGAAACACTCATT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173325 214 + 1231380 GGGCTGGCCCCAGTAGCCAGGAGGA-------GTGTGTCA---------------TCAGTTCCCACTAACGGGGACAAGGTGCACC----ATCTCGATTTCCTTTCTGGAAGTTAAGAGCTTCAACATAAGCATTTTCTG-AGGCTTAGATCACCACAGCAGattcacacattaat-------ttattcattcattcTGCCCCACCCACA-TTGTCTAGTCCTGGAAGCCCAG---------------AGATGAAACGCTCATT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2705304 192 + 11732439 GGTCTGGCCCT--------------------------------------------TCAGCTCCCACAAATGGGGACAGGGTGCACC----ATCTCGATTTCCTTTCTGGAAGTTAATAGCTTCAACATAAGCATTTTCTG-AGGCTTAGATCACCACAGCAGattcacacattaat-------ttattcattcattcTGCCCCACCCACG-TTGTCTAGTCCTAGAAACCCAG---------------AGACAAAACACTCAGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22869009 186 + 22939663 ------------------------A-------TTGTG-------------GCCCCTCTGTTCCCACAGACATGGATGGGGAGGGGCTCAGATCTCATTTTTCTTTCTAGAAGTTGGCAGCTTCCCCACAAACATTTTTTG-AGGCTCAGGTCACTGCTGCAGATTCACATGTTTGC-------TTATT-GTTCATTCTGCCT--CACA----TGTCTGGCCCCAGAAACCCAG---------------AGTTGAAATGGT---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181812466 115 + 182113224 ------------------------------------------------------------------------------------TC----AGCTCCATT--CCTTCTGATAGTGAATGTCAGTTGCATAGCCTGT------AGGCTCAAATTAC-----------------------------TCATTCACTCACT--------AACACTGTAGTTTAGTCAT-GAAACTCAA---------------AGTTGGAGAACTCAGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47626549 193 + 47698779 GCTTTGGTCCCGGCAGCCAGAGGCATGTCATTGCCTGTTGTCACCAAGGGGGCCTTCCGTC-----------TGGGCGGCTTCACC----GCCAGAAATGTCTTTCTAAGACTT---------------GGCATTTTCTG-TGGCTCAGCTGACCACGGC-GATGCGCACGTTGAC-------TCAT------------CCC--CTCGCT-GTGTCCAGCTGCAGAAATCTAG-----------------TTGGGACCATCCGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 265724 165 - 397369 --------------------------------------TGTGG------GGCCCAT--------GCA-----GGGAGGAACGTGTC----ACT-------------------------------------GCATTTTCTGAAAGCCAAGATGTCCATGGCAGGCCCATGCGTCCATGCATGCATCATTCACTCGTTATGCCCCACCCACC-CCCTGCAGGCCCCAGAGTCAAAGCCGGGGGGGGGGGGGAGGGGGGGGCTTTGT i dasNov3.JH569290 C 0 I 1 e proCoq1.NW_012150197v1 1880594 476 - 2029793 I e micMur3.chr18 56885927 252 + 57149010 I a score=837443.000000 s hg38.chr20_KI270870v1_alt 133262 74 + 183433 CCTGCAGCTTCTGGGACTG----------TCCTCTCTCCCTCT--------TTCCT-TCTTCTCTTGCCATCTT-TCTTGCATTCCTTTTTCCT------- s panTro5.chr20 66459354 74 + 66533130 CCTGCAGCTTCTGGGACTG----------TCCTCTCTCCCTCT--------TGCCT-TCTTCTCTTGCCATCTT-TCTTGCATTCCTTTTTCCT------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134401 74 + 62195757 CCTGCAGCTTCTGGGACTG----------TCCTCTCTCCCTCT--------TGCCT-TCTTCTCTTGCCATCTT-TCTTGCATTCCTTTTTCCT------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523472 74 - 578057 CCTGTAGCTTCTGGGACTG----------TCCTCTCTCCCTCT--------TTCCT-TCTTCTCTTCCCATCTT-TCTTGCATTCCTTTTTCCT------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045838 74 - 110113093 ACTGCAGCTTCTGGGACTG----------CCCTCTCTCCCTCT--------TTCCG-TCTTCTCTTGCCATCTT-TCTTGCGTTCCTTTTTCCT------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779637 71 - 92844088 CCTGCAGCTTCTGGGACTG----------TCCTCTCTCCCTCT--------CTC----CTTCTCTTGCCATCTT-TCTTGCATTCCTTTTTCCT------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96445691 71 + 96509753 CCTGCAGCTTCTGGGACTG----------tcctctctccctct--------ctc----cttctcttgccatctt-tcttgcattcctttttcct------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916651 71 - 16982598 CCTGCAGCTTCTGGGACTG----------TCCTCTCTCCCTCT--------CTC----CTTCTCTTGCCATCTT-TCTTGCATTCCTTTTTCCT------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719431 71 - 3785965 CCTGCAGCTTCTGGGACTG----------TCCTCTCTCCCTCT--------TTC----CTTCTCTTGCCATCTT-TCTTGCATTCCTTTTTCCT------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297671 71 - 90373283 CCTGCAGCTCCTGGGACTG----------TCCTCTCTCCCTCT--------TTC----CTTCTCTTGCCATCTT-TCTTGCATTCCTTTTTCCT------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 111966 71 - 179258 CCTGCAGCTTCTGGGACTG----------TCCTCTCtccctct--------ttc----cttctcttgccatctt-tcttgcattcctttttcct------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5587799 74 - 5823884 CCTGCAGCTTCTGGGACTG----------TCCTctctccctct--------ttcct-tcttctcttgccatctt-tcttgcattcctttttcct------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 68941 62 + 372756 CCTGCAGCCTCTGGGACTA----------TCCTCTCTCC----------------------CTCTTTCTTTCTTCTGTTGCATCCCTTCTTCCT------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304480 72 + 16356641 CCTGCAGCCTCTGGGACTG----------CCCTCTCTCC--TG--------TTCCT-TCTTCTCTTGCCATCTT-TCTTGCAACCCTTCTTCCT------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173539 74 + 1231380 CCTGCAGCCCCTGGGCCTG----------CCTTCTCTCCCTCT--------TTCCT-TCCTCTCTTGCCATCTT-TCTTGCATCCCTTCTTCCT------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2705496 70 + 11732439 CCTGCAGCCTCTGGGACTG----------TCCTCTCTCC------------CTCCT-TCTTCTCTTGCCATCTT-TCTTGCATCCCTTCTTCCT------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56886179 74 + 57149010 CCTGCAGCTTCAGAGACTC----------CTCTCTTTCCCTCT--------CTCCT-TCTTCTCTTGCCATCTT-TCTTGCATTCCTTTTTCCT------- i micMur3.chr18 I 252 I 172 s otoGar3.GL873542 22869195 65 + 22939663 CCCGCAGCTTCAGAGATGC------------ttctttctctct--------ttcct-tctgcc-------tttt-tcttgtattccttttttct------- i otoGar3.GL873542 C 0 I 7 s mm10.chr2 181812581 82 + 182113224 CCTGTAGCCTCAGGGAACA----------TCCCCCCCCCCCCCACATGCCATCCCT-CCACACTTCATTGTCTT-TGTTGTATTCTCTCCTACC------- i mm10.chr2 C 0 I 10 s canFam3.chr24 47626742 85 + 47698779 CCTGCAGGCTCAGGAcccctccccgcacctcctctccctctcc--------ttcctctcttctcTTAACGTCTT-TCCCATGTTCCTTTTCCCT------- i canFam3.chr24 C 0 I 7 s dasNov3.JH569290 265890 78 - 397369 CCTGTGGCCTCAGGAGCTT----------TCCCCTCCTTTCCT--------TCC---TCTTCT-GTGCCTTCTT-TCTTGGGCTTATGTCTCCAATTTTTG i dasNov3.JH569290 I 1 C 0 e proCoq1.NW_012150197v1 1880594 476 - 2029793 I a score=1635479.000000 s hg38.chr20_KI270870v1_alt 133336 174 + 183433 TTTCCAATTCTGCTTTCTTTT---CCGTGATTAG--------TCTCCATGGTTTTTCCCATTT--GGGCCTGAATAATTTAAGAG-GAGAAATGTGGCTGCAGG--CACTCAGTGGCCCCAAATGTCACCATGTCCTTTCTGTCCTGTGAAGTGGA-TGCTTGGG--CGGATGAAAGGA--------GCTTGGCACAGTTC s panTro5.chr20 66459428 174 + 66533130 TTTCCAATTCTGCGTTCTTTT---CCGTGATTAG--------TTTCCATGGTTTTTCCCATTT--GGGCCTGAATAATTTAAGAG-GAGAAATGTGGCTGCAGG--CACTCAGTGGCCCCAAATGTCACCATGTCCTTTCTGTCCTGTGAAGTGGA-TGCTTGGG--TGGATGAAAGGA--------GCTTGGCACAGTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134475 174 + 62195757 TTTCCAATTCTGCGTTCTTTT---CCGTGATTAG--------TTTCCATGGTTTTTCCCATTT--GGGCCTGAATAATTTAAGAG-GAGAAATGTGGCTGCAGG--CACTCAGTGGCCCCAAATGTCACCATGTCCTTTCTGTCCTGTGAAGTGGA-TGCTTGGG--TGGATGAAAGGA--------GCCTGGCACAGTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523546 174 - 578057 TTTCCAATTCTGCTTTCTTTT---CCGTGATTAG--------TTTCCATGGTTTTTCCCATTT--GGGCCTGAATAATTTAAGAG-GAGAAATGTGGCTGCAGG--CACTCAGTGGCCCCAAATGTCACCATGTCCTTTCTGTCCTGTGAAGTGGA-TGCTTGGG--CGGATGAAAGGA--------GCTTGGCACAGTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110045912 175 - 110113093 TTTCCAATTCTGCTTTCTTTT---CTATGATTAG--------TTTCCATGGTTTTTCCCATTT--GGGCCTGAGTAATTTAAGAGCGAGAAATGTGGCTGCATG--CACTCAGTGGCCCCAAATGTCACCATGTCCTTTCTGTCCTGTGAAGTGGA-AGCTCGGG--CGGATGAAAGGA--------GCTTGGCACGGTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779708 175 - 92844088 TTTCCAGTTCTGCTTTCTTTT---CTATGATTAG--------TTCCCATGGTGTTTCCCATTTGAGGGGCTGAATAATTGAAGGGCGAGAAATGTGGCTGCGTG--CACCCAGTGG-CCC-AATGTCACCGTGTCCTTTCTGTCCTGCTAAGTGGA-TGCCCAGG--TGGATGAGAGGA--------GCTTGGCACGGTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96445762 176 + 96509753 tttccagttctgctttctTTT---CTATGATTAG--------TTCCCATGGTGTTTCCCATTTGAGGGGCTGAATAATTGAAGGGCGAGAAATGTGGCTGCGTG--CACCCAGTGGCCCC-AATGTCACCGTGTCCTCTCTGTCCTGCTAAGTGGA-TGCCCAGG--TGGATGAGAGGA--------GCTTGGCACGGTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916722 176 - 16982598 TTTCCAGTTCTGCTTTCTTTT---CTATGATTAG--------TTCCCATGGTGTTTCCCATTTGAGGGGCTGAATAATTGAAGGGCGAGAAATGTGGCTGCGTG--CACCCAGTGGCCCC-AATGTCACCGTGTCCTTTCTGTCCTGCTAAGTGGA-TGCCCAGG--TGGATGAGAGGA--------GCTTGGCACGGTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719502 176 - 3785965 TTTCCAGTTCTGCTTTCTTTT---CTATGATTAG--------TTCCCATGGTGTTTCCCATTTGAGGGCCTGAATAATTGAAGGGCGAGAAATGTGGCTGCGTG--CACCCAGTGGCCCC-AATGTCACCGTGTCCTTTCTGTCCTGCTAAGTGGA-TGCCCAGG--TGGATGAAAGGA--------GCTTGGCACGGCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297742 176 - 90373283 TTTCCAATTCTGCTTTCTTTT---CTATGATTAG--------TTCCCATGGTGTTTCCCATCTGAGGGCCTGAATAATTGAAGGGCGAGAAATGTGGCTGTGTG--CACCCAGTGGCCCC-AATGTCACCATGTCCTTTCTGTCCTGCTAAGTGGA-TGCCCAGG--TGGATGAAAGGA--------GCTTGGCACAGTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112037 176 - 179258 tcTCCAGTTCTGCTTTCTTTT---CTATGATTAG--------TTCCCATGGTGTTTCCCATTTGAGGGCCTGAATAATTGAAGGGCGAGAAATGTGGCTGCGTG--CACCCAGTGGCCCC-AATGTCACCGTGTCCTTTCTGTCCTGCTAAGTGGA-TGCCCAGG--TGGACGAAAGGA--------GCTTGGCACGGTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5587873 176 - 5823884 tttccaattctgctttctttt---cTATGATTAG--------TTCCCATGGTATTTCCCATTTGAGGGCCTGAATAATTGAAGGGCGAGAAATGTGGCTGTGTG--CACCCAGTGGCCCC-GATGTCACCGTGTCCTTTCTGTCCTGCTAAGTGGA-TGCCCAGG--TGGATGAAAGGA--------GCTTGGCACGGTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 69003 178 + 372756 TTTCCAGTTCTATTTTCTTTT---CTATGATTAG--------TTTCCATGGTG-TTCCCATTTGAGGGCCTGAATAATTTGAGAGCGAGAAGTGTGGCTGCATG--CACTCAGTGGCCCCAAATGTCACAACTTCCTTTCTGTCCTGCAAAGTGGA-TGCCCAGGCCTGATGGAAAGGA--------GCTTGGCACCATCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304552 177 + 16356641 TTTCCAGTTCTGTTTTCTTTT---CTATGATTAG--------TTTCCATTA-G-TTCCCATTTGGGGGCCTGAATAATTTGAGAGTGAGAATTGTGGCTGCGTG--CACTCAGTGGCCCCAAATGTCACAGTGTCCTTTCTGTCCTGCGAGGTGGA-TGCTCAGGGCTGATGGGAAGGA--------GCTTGGCACCATCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173613 178 + 1231380 TTTCCAGCTCTGTTTTCTTTT---CTATGGTTAG--------TTTCCATGGTG-TTCCCACGTGAGGGCCTGAATAATTTGAGAGTGAGAAGTGTGGCCGCATG--CACTCCGTGGCCCCAAATGTCACAACGTCCTTTCTGTCCTGCGAAGTGGA-TGCTCAGGGCTGATGGGAAGGA--------GCTTGGCACCATCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2705566 166 + 11732439 TTTCCAGTTCTGTTTTATTTT---CTATGATTAG--------TTTCCGTGGTG-TTCCCATTTGAGGGCCTGAATAATTTGAGA------------GCTGCTTG--CACTCAGTGGCCCCAAATGTCACAACGTCCTTTCTGTCCTGCGAAGTGGA-TGCTCAGGGCTGATGGAAAGGA--------GCTTGGCACCATCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22869267 160 + 22939663 tttccagttctgctttctttt---ctATGATCAG--------TTTCCATGGT--TTCCAATTTGAGGGCCTAAGTAGCTTGAGAGCATGAGATGTGGCTGCGTG--CG--TAGTGG---------------TGTCCTTT-TGTCGTGCCTAGCAGAGGGCTCAGGGCTGAGAGAAATGG--------ACTCAGCGTGATAA i otoGar3.GL873542 I 7 C 0 s mm10.chr2 181812673 123 + 182113224 TTTTTATATCTGCTTCCTTTT----TGAACTCAG--------GCCCTAGAGAACTCCCTATCTCAGG------------------------ATATAACTGTAT----ACTCTGTGGCCCT----------------------------GAAACTGA-CATTCAGGGCCAACAAGAGGAA--------GCTTGGC-TGATCC i mm10.chr2 I 10 C 0 s canFam3.chr24 47626834 166 + 47698779 TTTCCAGTTCCACTTGCGTTTTCACTATGCTTAG--------TTTTCATGGTT-TTCCAGTTTGAGGGACTGAATGATTTTGGAGCTGCGTGAGTGACCAGACG--CGTGCAGTGGGCCT-----------------TTCT-TCCTGCAGAGCAGG-TGCTCGGGCCCTGTTGGAACGACGCCGTGGGCCTGGCCT----- i canFam3.chr24 I 7 C 0 s dasNov3.JH569290 265968 154 - 397369 CTTCTAATTCTACTTTCTTTC---CTAC--CTAGAAAAAACATTTTCTTAAC--TTTCCAGTTTAAGGGTTGAATTATTTCAGTGCTGTGGACATGGCCACATGGACAGCTGGTGATCCT------------------TCCATGTTGCAAAGAGCA--GCTTGGG----CATGATCTGA--------GCCCGG-------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1880594 476 - 2029793 I e micMur3.chr18 56886253 172 + 57149010 I a score=1010995.000000 s hg38.chr20_KI270870v1_alt 133510 71 + 183433 GGGCCTGGAGACATGGCCGTCTGGGAGAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGAAGAACCT---TAA-C- s panTro5.chr20 66459602 71 + 66533130 GGGCCTGGAGACATGGCCGTCTGGGAGAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGAAGAACCT---TAA-C- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134649 71 + 62195757 GGGCCTGGAGACATGGCCGTCTGGGAGAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGAAGAACCT---TAA-C- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523720 71 - 578057 GGGCCTGGAGACATGGCCGTCTGGGAGAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGACGAACCT---TAA-C- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046087 72 - 110113093 GGGCCTGGAGACATGGCCGTCTGGGAGAGTTAGT-------GCTTTTTGAAGACTAAGAGCCTGTGAAGAACCT---TAATT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779883 71 - 92844088 CGGCCTGGAGACACGGCCGTCTGGGAGAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGAAAAACTT---TAA-C- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96445938 71 + 96509753 CGGCCTGGAGACACGGCCGTCTGGGAGAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGAAAAACTT---TAA-C- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916898 71 - 16982598 CGGCCTGGAGACACGGCCGTCTGGGAGAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGAAAAACTT---TAA-C- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719678 71 - 3785965 CGGCCTGGAGACATGGCCATCTGGGAGAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGAAGAACTT---TGA-C- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297918 71 - 90373283 CGGCCTGGAGACATGGCCGTCTGGGACAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGACGAACTT---TAA-C- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112213 71 - 179258 CGGCCTGGAGACATGGCCGTCTGGGAGAGTTAGT-------GCTTTTTTAAGACTAAGAGCCTGTGAAGAACTT---TAA-C- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588049 71 - 5823884 CGGCCTGGAGACACGGCCGTCTGGGAGAGTTAGT-------GCTTTTTTGAGACTAAGAGCCTGTGAAGAACTT---TAA-C- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 69181 71 + 372756 GGGCCTGGACACATGGCTATCTGGGAGAGTTGGT-------GCTCTTTTAAGATGAAGAACCTGTGAAGAACTT---TAA-C- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304729 71 + 16356641 GGGCCTGGACACGTGGCCAACTGGGAGAGCTGGT-------GCTCTTTTAAGACGAAGAGCCTGTGAAGAACTT---TAG-C- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173791 71 + 1231380 GGGCCTGGACACATGGCCATCTGGGAGAGTTAGT-------GCTCTTTTAAGACGAAGAGCCTGTGAAGAACTT---TAG-C- i cebCap1.NW_016107870v1 C 0 I 5 s aotNan1.NW_018500483v1 2705732 71 + 11732439 GGGCCTGGACACGTAGCCATCTGGGACAGTTAGT-------GCTCTTCTAAGACGAAGAGCCTGTGAAGAACTT---TAA-C- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56886425 71 + 57149010 GGGCCTGGGGACACAGCTGTCTGGGACAGTTAGT-------GTGTTTTTAAGACCGAGAGCCTGTGAAGAACCT---CAA-C- i micMur3.chr18 I 172 C 0 s proCoq1.NW_012150197v1 1881070 71 - 2029793 GGGTCTGGAGACACGGCTGTCTGGGAGGGTTAGT-------GTGTTTTTAAGACTGAGAGCCTGTGAAGAGCTT---CAA-C- i proCoq1.NW_012150197v1 I 476 C 0 s otoGar3.GL873542 22869427 70 + 22939663 ATGCCTGGAGA---AGCTGTCTGGGAGGG-TAGC-------GCATTTTTGAGACTAAGAGTCTGTGAAGAACTTCAACAA-C- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181812796 60 + 182113224 ---ATTGGAAGGTAGACC--CTGGGAGGGTCTGCACCCCAAGTCTATTTAAAA-------------AGAAACTT---TAA-C- i mm10.chr2 C 0 C 0 s canFam3.chr24 47627000 70 + 47698779 GGGCCTGGAAACGCGGCTGTC-GGGAGGGTTAGT-------GCTCGTCTAGGACTAAGAACCTGTGAGGAACTT---TAA-C- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 266122 54 - 397369 GGGTCTGGA-------------AGGACAG------------ACCCTCTTAGGACAAAGACCCCAGGAAGGACTT---TAA-CC i dasNov3.JH569290 C 0 C 0 a score=67119.000000 s hg38.chr20_KI270870v1_alt 133581 9 + 183433 GCCAAACTT s panTro5.chr20 66459673 9 + 66533130 GCCAAACTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134720 9 + 62195757 GCCAAACTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523791 9 - 578057 GCCAAACTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046159 9 - 110113093 GCCAAACTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779954 9 - 92844088 TCCAAACTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96446009 9 + 96509753 TCCAAACTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916969 9 - 16982598 TCCAAACTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719749 9 - 3785965 TCCAAACTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297989 9 - 90373283 TCCAAACTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112284 9 - 179258 TCCAGACTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588120 9 - 5823884 TCCAAACTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 69252 5 + 372756 -CCACA--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304800 5 + 16356641 -CCACA--- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2705803 5 + 11732439 -CCGCA--- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56886496 9 + 57149010 TCAAAACTT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1881141 9 - 2029793 TCAAAACTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22869497 9 + 22939663 TCAAAATCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181812856 9 + 182113224 ATAAAGCTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47627070 8 + 47698779 -CCAAGCTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 266176 9 - 397369 CCCAAACTT i dasNov3.JH569290 C 0 C 0 e cebCap1.NW_016107870v1 1173862 5 + 1231380 I a score=25846.000000 s hg38.chr20_KI270870v1_alt 133590 2 + 183433 CT s panTro5.chr20 66459682 2 + 66533130 CT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134729 2 + 62195757 CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523800 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046168 2 - 110113093 CT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779963 2 - 92844088 CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96446018 2 + 96509753 CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916978 2 - 16982598 CT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719758 2 - 3785965 CT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90297998 2 - 90373283 CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112293 2 - 179258 CT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588129 2 - 5823884 CT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 69257 2 + 372756 CT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304805 2 + 16356641 CT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173867 2 + 1231380 CT i cebCap1.NW_016107870v1 I 5 C 0 s aotNan1.NW_018500483v1 2705808 2 + 11732439 CT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56886505 2 + 57149010 CT i micMur3.chr18 C 0 I 1308 s proCoq1.NW_012150197v1 1881150 2 - 2029793 CT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22869506 1 + 22939663 T- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181812865 2 + 182113224 CT i mm10.chr2 C 0 C 0 s canFam3.chr24 47627078 2 + 47698779 GT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 266185 2 - 397369 CT i dasNov3.JH569290 C 0 C 0 a score=111426.000000 s hg38.chr20_KI270870v1_alt 133592 7 + 183433 TTAGAAA s panTro5.chr20 66459684 7 + 66533130 TTAGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134731 7 + 62195757 TTAGAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523802 7 - 578057 TTAGAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046170 7 - 110113093 TTAGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779965 7 - 92844088 TTAGAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96446020 7 + 96509753 TTAGAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916980 7 - 16982598 TTAGAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719760 7 - 3785965 TTAGAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90298000 7 - 90373283 TTAGAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112295 7 - 179258 TTAGAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588131 7 - 5823884 TTAGAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 69259 7 + 372756 CTAGAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304807 7 + 16356641 TTAGAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173869 7 + 1231380 TTAGAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2705810 7 + 11732439 TTAGAAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1881152 7 - 2029793 TCAGAAA i proCoq1.NW_012150197v1 C 0 I 372 s otoGar3.GL873542 22869507 7 + 22939663 TCAGAAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181812867 7 + 182113224 GTGGGAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47627080 7 + 47698779 TTAGAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 266187 7 - 397369 TTTGTAA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56886507 1308 + 57149010 I a score=3653265.000000 s hg38.chr20_KI270870v1_alt 133599 373 + 183433 TAACGACCAAAAGCCTCC-CCTGTGTGAAAGTGAACCGCTCATCAGCATCAGCAGGGTTTGGGCAGGCAGCCACGG---CCTCCAGGCTCCTTCAGAAACTCCACTCT-CCCCCAG--------GGGCCTTTCCATGGGAGGCCACTTCCTTTCCTCCCTCCGACCACTGCATGAGCTTGGGAC-GATGGTGGTCTCCCCC----CGCCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTCCTGTGTGAGGCGG-----CATCGGGCACTGGCCCCTCCTGATCAGCCTCGTGGCAGCCATGGGTGACGGTGGCCTTGGGA---------------------------CAAACGAGGTTCCTTTCATGACTTCCC--TGTCCGCACCTGGCTGCAGCGACAGTC--AGATGATGTGTG s panTro5.chr20 66459691 373 + 66533130 TAACGACCAAAAGCCTCC-CCTGTGTGAAAGTGAACCGCTCATCAGCATCAGCAGGGTTTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAACTCCACTCT-CCCCCAG--------GGGCCTTTCCGTGGGAGGCCACTTCCTTTCCTCCCTCCGACCACTGCATGAGCTTGGGAT-GATGGTGGTCTCACCC----CACCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTACTGTGTGAGGCGG-----CATCGGGCACTGGCCCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGACGGTGGCCTTGGGA---------------------------CAAACGAGGTTCCTTTCATGACCTCCC--TGTCCACACCTGGCTGCAGCGACAGTC--AGATGATGTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62134738 373 + 62195757 TAACGACCAAAAGCCTCC-CCTGTGTGAAAGTGAACTGCTCATCAGCATCAGCAGGGTTTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAACTCCACTCT-CCCCCAG--------GGGCCTTTCCGTGGGAGGCCACTTCCTTTCCTCCCTCCGACCACTGCATGAGCTTGGGAT-GATGGTGGTCTCACCC----CGCCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTACTGTGTGAGGCGG-----CATCGGGCACTGGCCCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGATGGTGGCCTTGGGA---------------------------CAAACGAGGTTCCTTTCATGACCTCCC--TGTCCACACCTGGCTGCAGCGACAGTC--AGATGATGTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 523809 373 - 578057 TAACGACCAATAGCCTCC-CCTGTGTGAAAGTGAACCGCTCATCAGCATCAGCAGGGTTTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAACTCCACTCT-CCCCCAG--------GGGCCTTTTCATGGGAGGCCACTTCCTTTCCTCCCTCCGACCACTGCATGAGCTTGGGAC-GGTGGTGGTCTTACCC----CGCCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTCCTGTGTGAGGCGG-----CATCGGGCACTGGCCCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGACGGTGGCCTTGGGA---------------------------CAAACGAGGTTCCTTTCATGACCTCCC--TGTCCACACCTGGCTGCAGCGACAGTC--AGATGATGTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046177 362 - 110113093 TAACGACCAAAAGCCTCC-CCTGT-TGAAAGTGAACCTCTCATCAGCATCAGCAGGGTTTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAACTCCTCTCT-CCCC------------------TCCGTGGGAGGCCACTTCCTCTCCTCCCTCCGACCACTGCATGAGCTTGGGAC-GATGGTGGTCTCACCC----CGCCACGTGTCCCGGTGTACCAGC--------CT-CCTTGTTCTCTGCCACCTCCTGTGTGAGGCGG-----CATCAGGCACTGGCTTCTCCTGATCAGCCTTGTGGCAGCCATGGGTGAAGGTGGCCTTGGGA---------------------------CAAACGAGGTTCCTTTCATGACCTCCC--TGTCCACACCTGGCTGCAGCGACAGTC--GGATGATGTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92779972 373 - 92844088 TAACGACCAAAAGCCTCC-CCTGTGTGAAAGTGAACCACTCATCAGCATCGGCAAGGTGTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAGCTCCACTCT-CCCCCAG--------GGGCCTTTCCATGGGAGGCCACTTCCTCTCCTCCCTCCGACCACTGCACGAGCTTGGGAC-GATGGTGGTCCTGCCC----CGCCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTCCTGTGTGAGGGGG-----CATCAGGCACTGGCTCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGAAGGTGGCCTTGAGA---------------------------AAAATGAGGTTCCTTTCATGACCTCCC--TGTCCACAACTGGCTGCAGTGACAGTC--GGATGATGTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96446027 373 + 96509753 TAACGGCCAAAAGCCTCC-CCTGTGTGAAAGTGAACCACTCATCAGCGTCGGCAAGGTGTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAGCTCCACTCT-CCCCCAG--------GGGCCTTTCCATGGGAAGCCACTTCCTCTCCTCCCTCCGACCACTGCACGAGCTTGGGAC-GATGGTGGTCCTGCCC----CGCCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTCCTGTGTGAGGGGG-----CATCAGGCACTGGCTCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGAAGGTGGCCTTGAGA---------------------------AAAATGAGGTTCCTTTCATGACCTCCC--TGTCCACAACTGGCTGCAGTGACAGTC--GGATGATGTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16916987 375 - 16982598 TAACGACCAAAAGCCTCC-CCTGTGTGAAAGTGAACCACTCATCAGCATCGGCAAGGTGTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAGCTCCACTCT-CCCCCAG--------GGGCCTTTCCATGGGAGGCCACTTCCTCTCCTCCCTCCGACCACTGCACGAGCTTGGGAC-GATGGTGGTCCTGCCC----CGCCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTCCTGTGTGAGGGGG-----CATCAGGCACTGGCTCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGAAGGTGGCCTTGAGA---------------------------AAAATGAGGTTCCTTTCATGACCTCCCTGTGTCCACAACTGGCTGCAGTGACAGTC--GGATGATGTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3719767 373 - 3785965 TAACGACCAAAAGCCTCC-CCTGTGTGAAAGTGAACCACTCATCAGCATCGGCAAGGTGTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAGCTCCACTCT-CCCCCAG--------GGGCCTTTCCATGGGAGGCCGCTTCCTCTCCCCACTCCGACCACTGCACGAGCTTGGGAC-GATGGTGGTCCTGCCC----CGCCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTCCTGTGTGAGGGGG-----CATCAGGCACTGGCTCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGAAGGTGGCCTTGAGA---------------------------AAAATGAGGTTCCTTTCTTGACCTCCC--TGTCCACAACTGGCTGCAGTGACAGTC--GGATGATGTGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90298007 373 - 90373283 TAACGACCAAAAGCCTCC-CCTGTGTGAAAGTGAACCACTCATCAGCATCGGCAAGGTGTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAGCTCCACTCT-CCCCCAG--------GGGCCTTTCCATGGGAGGCCACTTCCTCTCCTCCCTCTGACCACTGCACGAGCTTGGGAC-GGTGGTGGTCCTGCCC----CGCCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTCCTGTGTGAGGGGG-----CATCAGGCACTGGCTCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGAAGGTGGCCTTGAGA---------------------------AAAATGAGGTTCCTTTCATGACCTCCC--TGTCCACAACTGGCTGCAGTGACAGTC--GGATGATGTGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112302 373 - 179258 TAACGACCAAAAGCCTCC-CCTGTGTGAAAGTGAACCACTCATCAGCATCGGCAAGGTGTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAGCTCCACTCT-CCCCCAG--------GGGCCTTTCCATGGGAGGCCGCTTCCTCTCCCCACTCCGACCACTGCACGAGCTTGGGAC-GATGGTGGTCCTGCCC----CGCCACGTGTCCTGGTGTACCAAC--------CT-CCTTGCTCTCTGCCACCTCCTGTGTGAGGGGG-----CATCAGGCACTGGCTCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGAAGGTGGCCTTGAGA---------------------------AAAATGAGGTTCCTTTCATGACCTCCC--TGTCCACAACTGGCTGCAGTGACAGTC--GGATGATGTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588138 355 - 5823884 TAACGACCAA----------------GAAAGTGAACCACTCATCAGCATCGGCAAGGTGTGGGCAGGCAGCCAAGG---CCTCCAGGCTCCTTCAGAAGCTCCACTCT-CCCCCAG--------GGGCCTTTCCATGGGAGGCCACTTCCTCTCCTCCCTCCGACCACTGCACGAGCTTGGGAC-GATGGTGGTCCTGCCC----CGCCACGTGTCCTGATATAGCAAC--------CT-CTTTGCTCTCTGCCACCTCCTGTGTGAGGGGG-----CATCGGGCACTGG---CTCCTGATCAGCCTTGTGGCAGCCATGGGTGAAGGTGGCCTTGGGA---------------------------AAAATGAGGTTCCTTTCATGACCTCCC--TGTCCACAACTGGCTGCAGTGACAGTC--AGATGATGTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 69266 371 + 372756 TAATGGCCAAAAGTCTCC-CATGTGTGAAAATGAATCACTCATCAGCATCAGCAAGGATTGGGCTGGCAGCCCAGG---CTTCCAGGTTCCTTCAGAAACTCCACTCT-CCCCCAG--------CGGACTTTTCATGGGAGGCCACTTCCTCTCCTCCCTCAGACCACTGCATGAACTTGGGAC-AATGGTGGTAGTACCC------CCACATGTCCTGATGTACCAAA--------CT-TCTTGCTCTCTGACACCTCCTGTTTGAGGGGG-----CATCAGGCACTGGCTCCTCGTGATCAGCTTTGTGGCAGCCATGGGTGAGGGTGGACTTGGGG---------------------------CAAATGAGGTTCCTTTCATGACCTCCC--TATCTATACCTGGCTGCAGAGACAGTC--AGATGATCTGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16304814 371 + 16356641 TAACGATCAAAAGTCTCC-CATGTGTGAAAATGAATCACTCATCAGCACCAGCAAGGATTGGGCTGCCAGCCAAGG---CCCCCAGGCTCCTTCAGAAACTCCACTCT-CCCTCAG--------CGGACTTTCCACAGGAGGCCACTTCCTCTCCTCACTCAGACCACTGCATGAGCTTGGGAC-GATGGTGGTAGTGCCC------CCACGTGTCCTGACGTACCAGC--------CT-CCTTGCTCTCTGACCCCTCCAGTTTGAGGGGG-----CATCGGGCACTGGCTCCTCCTGATCAGCATCGTGGCAGCCATGGGTGAGGGTGGCCTTGGGG---------------------------CAAACGAGGCTCCTTTCATGACCCCCC--TGTCTACACCTGGCTGCAGAGACAGTC--AGATGATCTGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1173876 371 + 1231380 TAACGACCAAAAGTCTCC-CATGTGTGAAAATGAATCACTCATCAGCATCAGCAAGGATTGGGCTGGCAGCCAAGG---CTCCCAGGCTCCTTCAGAAACTCCACTCT-CCCCCAG--------CAGACTTTCCACGGGAGGCCACTTCCTGTCCTTCCTCAGACCACTGCATGAGCTTGGGAC-GATGGTGGTAGTGCCC------CCATGTGTCCTGATGTACCAAC--------CC-CCTTGCTCTCTGACACCTCCTGTTTGAGGGGG-----CACCAGGCACTGGCTCCTCCTGATCAGCCTTGTGGCAGCCGTGGGTGAGGGTGGCCTTGGGG---------------------------CAAACGAGGTTCCTTTCATGACCTCCC--TATGTACACTTGGCTGCAGAGACAGTC--AGATGATCTGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2705817 355 + 11732439 TGACGATCAAAAGTCTCC-CATGTGTGAAAATGAATCACTCATCAGCATCCGCCGGGATTGGGCTGGCAGCCAAGG---CTTCCAGGTTCCTTCAGAAGCTCCACTCT-CCCCCAG--------CGGACT----------------TTCCTCTCCTCCCTCAGACCACTGCATGGGCTTGGGAC-GATGGTGGTCGTGACC------CCATGTGTCCTGATGTACCAAC--------CT-CCTTGCTCTCTGACACCTCCTGTTTGAGGGGG-----CATCAGGCACTGGCTCCTCCTGATCAGCCTTGTGGCAGCCATGGGTGAGGGTGGCCTTGGGG---------------------------CAAACGAGGTCCCTTTCATGACCTCCC--TATCTACACCTGGCTGCAGAGACAGTC--AGATGATCTGTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22869514 238 + 22939663 TAGCAA-CAAAGGTCTTC-CTTATGCGAAAGCCAATACCTCATCTGTCTCAGCAAGGTCTGGGCA--TAGCAGAGG---CATCCTGACTCCCTCTGAAGCTC-----------------------------TCAA--GGAGGCCACCACCCTGCCTCCCTCAGA----------GGCTTAGGAT-GACAGGAGGCCACTAC----CATCATGTGCCGT-ATGTGCAAAC--------ATGCCCTGCTCTCC----------------------------------------------------------------------------------------------------------------------------CTCCTTTC------------TCTCTGAACCAGGATGCAGCGATAGTCTTGGATGATGTGTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181812874 294 + 182113224 CAGTGG--AGGAGCCTCCTTCtatggatatatggat-----atatggatatatggTGTCTGTACTGACTCCTGAGC---ACTTCTTGTTCC------------------------A--------GAGCTTTTTC---TGGATCCATCGCCT-TGTTGCTTTAGACTCCAGTGTGGTCTTGGGG--GAAGGTGAATCTGACCTCTTTTCTACATTTCCTGATACCCCAGTG-------CT-CCTTGGATTCT----TGTTTTGTCTGTGTAGA-----TATCAGA-------TTCTCCAAAGTAG------------TGTAAGTGA-------------------------------------------------GCTCTTTTTGTGGTCTCCC--TAAAAATGCTAAAATACAGACATGATC-----TGGCATG-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47627087 389 + 47698779 TAGCAACAGAAAGCCTTC-C-TGTGTGAAAACCAGTCACTCATCAGCTTCAGCCAGACCTGGG---------AAGG---TGCCCCGGCTGCTCCC-AGGCTCCCCTCTGGCCCCAG--------AGGTCTTTTTGTGGGAGTCAGCTCCTGGTTCTCTC---GGGCACAGCGTGGGCTTGTGCTGGATGCGGGCCGGGCTC----CACCAGGT-TCCTGGTGTGTGGATGCTTCGCTCT-CCTTTCTCT------CCTCCTGTCC-AGTGGG-----CCTCTCGTACAGGCTGCTCCCAACCCACCT-GTGGCAGCAATAGGTGACCTGTCCCCAGAGAGGAAAAGGCACCTACATCACTGCTTTGCAAATGAGACTCTTCCGGTGGCCTCCC--TACCAACACCTGGCTGCAGTGACAGTCTCAGATGATGTGCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 266194 311 - 397369 CAGCAACACAAAATCCCT-----------------------------ATTGGCAATGGTGGGGTGGGTGGCTGAGGCATCCTCCAGTCCCCTCCAAATGTCCCTCCCT-GCCTAGGGCTGGGGTGTGTCTTTCCCTGGGAGCCCGCCTCCTGGCCTCCT---------------GGGCTGGGCT-GGATGTGGACTCTCCC----TGGCCC-TGCTCTGG-GCACT--T--------TT-CCTTCCTCTCTGCT-CCCACTGTGGGCGTCTGTGCTCCACCAGCCAGTGGAGACCCTTGAGCTG---------------AGGTGATCGCGCCCATCAGG--------------------------------TGGCTTCCTGT--TGGCCGTGG--TGT--------GGCAGCAGTGTCAGGT--GAGGGGCAGGCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1881159 372 - 2029793 I e micMur3.chr18 56886507 1308 + 57149010 I a score=417025.000000 s hg38.chr20_KI270870v1_alt 133972 25 + 183433 TTCTGTGTTTTAAGTGAATCCCAAG s panTro5.chr20 66460064 25 + 66533130 TTCTGTGTTTTAAGTGAATCCCAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62135111 25 + 62195757 TTCTGTGTTTTAAGTGAATCCCAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 524182 25 - 578057 TTCTGTGTTTTAAGTGAATCCCAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046539 25 - 110113093 TTCTGTGTTTTAAGTGAATCCCAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92780345 25 - 92844088 TTCTGTGTTTTAAGTGAATCCCAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96446400 25 + 96509753 TTCTGTGTTTTAAGTGAATCCCAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16917362 25 - 16982598 TTCTGTGTTTTAAGTGAATCCCAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3720140 25 - 3785965 TTCTGTGTTTTAAGTGAATCCCAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90298380 25 - 90373283 TTCTGTGTTTTAAGTGAATCCCAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112675 25 - 179258 TTCTGTGTTTTAAGTGAATCCCAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588493 25 - 5823884 TTCTGTGTTTTAAGTGAATCCCAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 69637 25 + 372756 TTCTGTGTTTTAAGTGAATCCCAAG i calJac3.chrUn_GL286459 C 0 I 10 s saiBol1.JH378156 16305185 25 + 16356641 TTCTGTGTTTTAAGTGAATTCCAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1174247 25 + 1231380 TTCTGTGTTTTAAGTGAATCCCAAG i cebCap1.NW_016107870v1 C 0 I 10 s aotNan1.NW_018500483v1 2706172 25 + 11732439 TTCTGTGTTTTAAGTGAATCCCAAG i aotNan1.NW_018500483v1 C 0 I 10 s proCoq1.NW_012150197v1 1881531 25 - 2029793 TTCTGTGTTTTAAGTGAATCCCAAG i proCoq1.NW_012150197v1 I 372 C 0 s otoGar3.GL873542 22869752 25 + 22939663 TTCTGTGTTTTAAGGGAATCCCAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181813168 24 + 182113224 TTCTGT-TTTTAAGCATGTTTCAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47627476 25 + 47698779 TTCTGTGTTTTAATTGAATCCCAAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 266505 22 - 397369 TGCTGT-TTTTACATGCATCCCA-- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56886507 1308 + 57149010 I a score=192007.000000 s hg38.chr20_KI270870v1_alt 133997 23 + 183433 GGCGTTCACTCTTCCCTCCCATG s panTro5.chr20 66460089 23 + 66533130 GGCGTTCACTCTTCCCTCCCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62135136 23 + 62195757 GGCGTTCACTCTTCCCTCCCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 524207 23 - 578057 GGTGTTCACTCTTCCCTCCCACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046564 23 - 110113093 GGCGTTCACTCTTCCCTCCCATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92780370 23 - 92844088 GGTGTTCACTCTTCCCTCCCATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96446425 23 + 96509753 GGTGTTCACTCTTCCCTCCCATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16917387 23 - 16982598 GGTGTTCACTCTTCCCTCCCATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3720165 23 - 3785965 GGTGTTCACTCTTCCCTCCCATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90298405 23 - 90373283 GGTGTTCACTCTTCCTTCCCATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112700 23 - 179258 GGTGTTCACTCTTCCCTCCCATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588518 23 - 5823884 GGCGTTCACTCTTCCCTCCCATG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16305210 6 + 16356641 -----------------TCAAAG i saiBol1.JH378156 C 0 C 0 s proCoq1.NW_012150197v1 1881556 23 - 2029793 GGTATTTTCTCTTCCCTTCCATG i proCoq1.NW_012150197v1 C 0 I 868 s otoGar3.GL873542 22869777 23 + 22939663 GGTATTTGCTCTTACCTTCCATA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181813192 19 + 182113224 AGTGTTTACTCT--CCTCCTG-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47627501 23 + 47698779 GACATCTGCTCTTCCCTGCCAAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 266527 23 - 397369 GGCATCCATTCGTTCCATCCACC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56886507 1308 + 57149010 I e cebCap1.NW_016107870v1 1174272 10 + 1231380 I e calJac3.chrUn_GL286459 69662 10 + 372756 I e aotNan1.NW_018500483v1 2706197 10 + 11732439 I a score=63299.000000 s hg38.chr20_KI270870v1_alt 134020 10 + 183433 ------TGTCTGATGT s panTro5.chr20 66460112 10 + 66533130 ------TGTCTGATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62135159 10 + 62195757 ------TGTCTGATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 524230 10 - 578057 ------TGTCTGATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046587 10 - 110113093 ------TGTCTGATGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92780393 10 - 92844088 ------TGTCTGATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96446448 10 + 96509753 ------TGTCTGATGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16917410 10 - 16982598 ------TGTCTGATGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3720188 10 - 3785965 ------TGTCTGATGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90298428 10 - 90373283 ------TGTCTGATGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112723 10 - 179258 ------TGTCTGATGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588541 10 - 5823884 ------TGTCTGATGT i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16305216 6 + 16356641 ------ACTCTA---- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22869800 10 + 22939663 ------TGCTTGGTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181813211 10 + 182113224 ------TGTGTGATAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47627524 10 + 47698779 ------TGTCCAGTGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 266550 11 - 397369 AGCACTGGCCT----- i dasNov3.JH569290 C 0 I 4 e proCoq1.NW_012150197v1 1881579 868 - 2029793 I e micMur3.chr18 56886507 1308 + 57149010 I e cebCap1.NW_016107870v1 1174272 10 + 1231380 I e calJac3.chrUn_GL286459 69662 10 + 372756 I e aotNan1.NW_018500483v1 2706197 10 + 11732439 I a score=3965382.000000 s hg38.chr20_KI270870v1_alt 134030 422 + 183433 GGTCA--------------AGGGCTGTG-AGGACATGGCCGCCTC---GGGCCACTCAGCTCATCT--TGTGTTGGGAGTTGAGCTGCAACCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGGGTGAAGAATGCCTGT---CCACAGCACGGGGAT--------GGGGCTTAGAGAGGTGAGACCTGGTGTGTATTGCCAAGGTAGAGGGTGCCCCTCAGACAC--GGTGTTCCCTTC---TGCCCAGATGGGGCACTCAGAAGCAGGTGGTGGGAGGGGTGGATGTGGCTCCAGATTCCTGCAGCTGACCCTGGGGGTCCACAGA-GCCATGAGGG---------------GCATGCAGAGGGGACACCTGCTCCTCTGACTATGTGAGTACTTTCCTCT---CTGGGACACAACTCTTGAGAAAAGCCATTGAATCGGGCCTTAGTGAGGACTGCAGGATGGCCCCCCC s panTro5.chr20 66460122 421 + 66533130 GGTCA--------------AGGGCTGCG-AGGACATGGCTGCCTC---GGGCCACTCAGCTCATCT--TGTGTTGGGAGTTGAGCTGCAACCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGGGTGAAGAATGCCTGT---CCACAGCACAGGGAT--------GGGGCTTAGAGAGGTGGGACCTGGTGTGTATTGCCAAGGTAGAGGGTGCCCCTCAGACAC--GGTGTTCCCTTC---TGCCCAGATGGGGCACTCAGAAGCAGGTGGTGGGAGGG-TGGATGTGGCTCCAGATTCCTGCAGCTGACCCTGGGGGTCCACAGG-GCCATAAGGG---------------GCATGCAGAGGGGACACCTGCTCCTCTGACTATGTGAGTATTTTCCTCT---CTGGGACACAACTCTTGAGAAAAGCCATTGAATCGGGTGTTGGTGAGGACTGCAGGATGGCCCCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62135169 422 + 62195757 GGTCA--------------AGGGCTGCG-AGGACATGGCTGCCTC---GGGCCACTCAGCTCATCT--TGTGTTGGGAGTTGAGCTGCAACCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGGGTGAAGAATGCCTGT---CCACAGCACAGGGAT--------GGGGCTTAGAGAGGTGGGACCTGATGTGTATTGCCAAGGTAGAGGGTGCCCCTCAGACAC--GGTGTTCCCTTC---TGCCCAGATGGGGCACTCAGAAGCAGGTGGTGGGAGGGGTGGATGTGGCTCCAGATTCCTGCAGCTGACCCTGGGGGTCCACAGG-GCCATAAGGG---------------GCATGCAGAGGGGACACCTGCTCCTCTGACTATGTGAGTACTTTCCTCT---CTGGGACACAACTCTTGAGAAAAGCCATTGAATCGGGCCTTAGTGAGGACTGCAGGATGGCCCCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 524240 422 - 578057 GGTCA--------------AGGGCTGCG-AGGACATGGCTGCCTC---GGGCCACTCAGCTCATCT--TGTGTTGGGAGTTGAGCTGCAACCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGGGTGAAGAACGCCTGT---CCACAGCACAGGGAT--------GGGGCTTAGAGAGGTGAGACCTGGTGTGTATTGCCAAGGTAGAGGGTGCCCCTCAGACAC--GGTGTTCCCTTC---TGCCCAGATGGGGCACTCAGAAGCAGGTGGTGGGAGGGGTGGATGTGGCTCCAGATTCCTGCAGCTGACCCTGGGGGTCCACAGG-GCCATAAGGG---------------GCATGCAGAGGGGACACCTGCTCCTCTGACTATGTGAGTACTTTCCTCT---CTGGGACACAACTCTTGAGAAAAGCCATTGAATCGGGCCTTAGTGAGGACTGCAGGATGGCCCCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046597 401 - 110113093 GGTCA--------------AGGGCT---------------GCCTC---GGGCCACTCAGCTCATCT--TGTGTTGGGAGTTGAGCTGCAGCCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGGGTGAAGAATGCCTGT---CCACAGCACAGGG---------------TTAGAGAGGTGAGACCTGGTGTGTATTGCCAAGGCAGAGGGTGCCCCTCAGACAC--GGTGTTCCCTTC---TGCCCAGATGGGGCACTCAGAAGCAGGTGGTGGGAGGGGTGGGGGTGGCTGCAGATTCCCGCAGCTGACCCTGGGGGTCCACAGG-GCCATAAGGG---------------GCATGCAGAGGGGACACCTGCTCCTCTGACTATGTGAGTACTTTCCTCT---CTTGGACACAACTCTTGAGAAAAGCCATCGAATCGGGCCTTAGTGAGGACTGCAGGATGGCCCCACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92780403 391 - 92844088 GGTCA--------------AGGGCTGAG-AGGACATGGTTGCCTC---CGGCCA---------------------------------CAGCCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGAGTGAAGAATGCCTGT---CCACAGCACAGGGAT--------GGGGCTGAGAGAGGTGAGACCTGGTGTGTATTGCCAAGGCAGAGGGTGTCCCTCAGACAT--GGTGCTCCCTTC---TGCCCAGATGGGACACTCAGAAACAGGCAGTGGGAGGGGTGGAGGTGGCTCCAGATTCCTGCAGCTGACCCTGGGGGTCCACAGG-GCCATAAGGG---------------GCATGCAGAGGGGACACCTGCTCTTCTGACTATGTGAGCACTTTCCTCT---CTTGGACACAACTCTTGAGAAAAGCCATTGAATCCGGCCTCAGTGAGGAGTGCAGGACGGCCCCACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96446458 391 + 96509753 GGTCA--------------AGGGCTGAG-AGGACATGGTTGCCTC---CGGCCA---------------------------------CAGCCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGAGTGAAGAATGCCTGT---CCACAGCACAGGGAT--------GGGGCTGAGAGAGGTGAGACCTGGTGTGTATTGCCAAGGCAGAGGGTGTCCCTCAGACAT--GGTGCTCCCTTC---TGCCCAGATGGGACACTCAGAAACAGGCAGTGGGAGGGGTGGAGGTGGCTCCAGATTCCTGCAGCTGACCCTGGGGGTCCACAGG-GCCATAAGGG---------------GCATGCAGAGGGGACACCTGCTCTTCTGACTATGTGAGCACTTTCCTCT---CTTGGACACAACTCTTGAGAAAAGCCATTGAATCCGGCCTCAGTGAGGAGTGCAGGACGGCCCCACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16917420 391 - 16982598 GGTCA--------------AGGGCTGAG-AGGACATGGTTGCCTC---CGGCCA---------------------------------CAGCCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGAGTGAAGAATGCCTGT---CCACAGCACAGGGAT--------GGGGCTGAGAGAGGTGAGACCTGGTGTGTATTGCCAAGGCAGAGGGTGTCCCTCAGACAT--GGTGCTCCCTTC---TGCCCAGATGGGACACTCAGAAACAGGCAGTGGGAGGGGTGGAGGTGGCTCCAGATTCCTGCAGCTGACCCTGGGGGTCCACAGG-GCCATAAGGG---------------GCATGCAGAGGGGACACCTGCTCTTCTGACTATGTGAGCACTTTCCTCT---CTTGGACACAACTCTTGAGAAAAGCCATTGAATCCGGCCTCAGTGAGGAGTGCAGGACGGCCCCACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3720198 391 - 3785965 GGTCA--------------AGGGCTGGG-AGGACATGGTTGCCTC---CGGCCA---------------------------------CAGCCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGAGTGAAGAATGCCTGT---CCACAGCACAGGGAT--------GGGGCTGAGAGAGGTGAGACCTGGTGTGTATTGCCAAGGCAGAGGGTGTCCCTCAGACAT--GGTGCTCCCTTC---TGCCCAGATGCGACACTCAGAAACAGGCAGTGGGAGGGGTGGAGGTGGCTCCAGATTCCTGCAGCTGACCCTGGGGGTCCACAGG-GCCATAAGGG---------------GCATGCAGAGGGGACACCTGCTCCTCTGACTATGTGAGCACTTTCCTCT---CTTGGACACAACTCTTGAGAAAAGCCATTGAATCCGGCCTCAGTGAGGAGTGCAGGACGGCCCCACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90298438 391 - 90373283 GGTCA--------------AGGGCTGAG-AGGACATGGTTGCCTC---CGGCCA---------------------------------CAGCCACACACACCTGCC------AGGGCGTGACAGGCTTTGTGCAGAGTGAAGAATGCCTGT---CCACAGCACAGGGAT--------GGGGCTTAGAGAGGTGAGACCTGGTGTGTATTGCCAAGGCAGAGGGTGTCCCTCAGACAT--GGTGCTCCCTTC---TGCCCAGATGGGACACTCAGAAACAGGCAGTGGGAGGGGTGGAGGTGGCTCCAGATTCCTGCAACTGACCCTGGGGGTCCACAGG-GCTATAAGGG---------------GCATGCAGAGGGGACACCTGCTCCTCTGACTGTGTGAGCACTTTCCTCT---CTTGGACACAACTCTTGAGAAAAGCCATTGAATCCGGCCTCAGTGAGGAGTGCAGGACGGCCCCACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 112733 391 - 179258 GGTCA--------------AGGGCTGAG-AGGACATGGCTGCCTC---CGGCCA---------------------------------CAGCCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGCGTGAAGAATGCCTGT---CCACAGCACAGGGAT--------GGGGTTGAGAGAGGTGAGACCTGGTGTGTATTGCCAAGGCAGAGGGTGTCCCTCAGACAT--GGTGCTCCCTTC---TGCCCAGATGGGACACTCAGAAACAGGCAGTGGGAGGGGTGGAGGTGGCTCCAGATTCCTGCAGCGGACCCTGGGGGTCCACAGG-GCCATAAGGG---------------GCATGCAGAGGGGACACCTGCTCCTCTGACTATGTGAGCACTTTCCTCT---CTTGGACACAACTCTTGAGAAAAGCCATTGAATCCGGCCTCAGTGAGGAGTGCAGGACGGCCCCACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588551 367 - 5823884 GGTCA--------------AGGGCTGAG-AGGACATGGTTGCCTC---CGGCCA---------------------------------CAGCCACACACACCTGCC------AGGGCATGACAGGCTTTGTGCAGGGTGAAGAATGCCTGT---CCACAGCACAGGGAT--------GGGGCTTAGAGAGGTAAGACCTGGTGTGTATTGCCAAGGCAGAGGGTGTCCCTCAGACAT--GGTGCTCCCTTC---TGCCCAGATGGGACACTCAGAAACAGGCAGTGGGAGGGGTGGAGGTGGCTCCAGATTCCTGCAGCTGACCCTGGGGGCCCACAGG-GCCA---------------------------------------TGCTCCTCTGACTATGTGAGCACTTTCCTCT---CTTGGACACAACTCTTGAGAAAAGCCATTGAATCCGGCCTCAGTGAGGAGGGCAGGATGGCCCCACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 69672 401 + 372756 GGCAC--------------AGGGCTAAG-AGGGCATGGCTGCCTC---AGGCCACTCAGCTCGTCT--TGCGCTGGGAGTTGAGTTGCAGC--CACATACCTGCC------TGGCCATGACAGGCTCTGTGCAGGGTGAAGGAGGTCTGT---CCACAGCACAGGGAT--------GGGGCTTAGAGAGGTGATACCTGGTGTGTACTGCCAAGGCAGA-GGTGCTCCTCAGACAT--GGCGCTCCTTTT---TGCCCAGATGGGGCACTCAGAAGCAGGTAGTGGGAGTGGTGAAGGTGGCTCCGGACTCTTGCAGCTGACCTTGGGGGTCCACAGA-GCCATAAGGG------------------------------GCCTGCTCCTCTGACTATGTGAGCACTTTCCTCT---CTTGGACACAACTT--GAGAAAAGCCATTGAATCAGGCCTCAGTGAGAAGTGCAGTGTGTCCTCAT- i calJac3.chrUn_GL286459 I 10 C 0 s saiBol1.JH378156 16305222 420 + 16356641 GGCAC--------------AGGGCTAAG-AGGGCATGGCGCCCTC---AGGCCGATCAGCTCGTCT--TGCTCTGGGAGTTGAGTTGCAGC--CACATGCCTGCCAGGCCGTGGCCATGACAGGCTCTGTGCAGGGTG-AGGAGGCCTGT---CCCTAGTACAGGGGT--------AGGGCTTAGAGAGGTGATACCTGCTGTGTATCGCCAAGGCAGA-GGTGCTCCTCAGACAT--GGCGCTCCTTTC---TGCTCAGGTGGGGCACTCAGAAGCAGGGGGTGGGAGTGGTGAAGGTGGCTCCAGACTCCTGCAGCTGACCTTGGGGGTCCACAGG-GCCACAGGGG----------------CCTGCAGAAGGGACGCCTGCTCCTCTGACTATGTGAGCACTTTCCTCT---CCTGGACACGACTT--GAGAAAAGCCATTGAATCAGGCCTCAGTGAGAAATGCAGTGTGGCCTCCC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1174282 414 + 1231380 GGCAC--------------AGGGCTAAG-AGGGCATGGCTGCCTC---AGGCCACTCAGCTCATCT--TGCGCTGGGAGTTGAGCTGCAGC--CACATACCTGCC------AGGCCATGGCAGGCTCTGTGCAGGGTGAAGGAGGTCTGT---CTCCAGCACAGGGAT--------GGGGTTTAGAGAGGTGATACCTGCTGTGTATTG-CAAGGCAGA-GGTGCTTCTCAGACAT--GGCACCCCTTTC---TGCCCAGATGGGGCACTCAGAAGCACGTGGTGGGAGTGGTGAAGGTGGCTCTAGACTCCTGCAGCTGACTTTGGGTGTCCACAGG-GCCATAGGGG----------------CCTGCAGAAGAGATGCCTGCTCCTCTGACTATGTGAGCACTTTCCTCT---CCTGGACACGACTC--CAGAAAAGCCATTGAATCAGGCATCAGTGAGAAGTGCAGTGTGGCCTCCC- i cebCap1.NW_016107870v1 I 10 C 0 s aotNan1.NW_018500483v1 2706207 402 + 11732439 GGCAC--------------AGGGCTGAG-AGGGCATGGCTGCCTC---AGGCCACTCAGCTCGTCT--TGCGCTGGGAGTTGAGTTGCAGC--CACATTCCTGCC------AGGCCATGACAGGCTCTGCGCAGGGTCAAGGA-GTCTGT---CCACAGCACAGGGAT--------GGGGCTTAGAGAGGTGATACCTGGCGTGTATTTCCAAGGCAGA-GATGCTCCTCAGACAT--GGTGCTCCCTTC---TGCCCAGGTGGGGCACTCAGAAGCAGGTGGTGGGAGTGGT-------------GACTCCTGCAGCTGACCTTGGGGGTCCACAGG-GCCATAAGGA---------------GCCTGCAGGAGGGACCCCTGCTCCTCTGACTATGTGCGCACTTTCCTCT---CTTGGACATGACTC--GAGAAAAGCCATTGAATCAGGCCTCAGTGAGAAGTGCAGAACGGCCTCAC- i aotNan1.NW_018500483v1 I 10 C 0 s otoGar3.GL873542 22869810 374 + 22939663 GGTCAGGGGCTGGAGACATAGGGCTAAG-AGGACACAGCTGGTTC---AGGCCACTCA-CTCTCCA--TGTGTAGGGAGTTGGGGTGTGAT--GGCTCATCTGCC------AGG------TAGGCTCTGCACAGGGTGAGGGGTGTC--C---CTGTGGCAGAGGGAT--------GGAGCTTGGTGA----------------------------------------TCAGACAC--TGCAGTTCCTTC---TGC-CAGACCAGGTGCTTAG-AGCAGGTGCAGGGAG--------GTGGCCCGGGATTCCTGGAGCTGACTCTGTGGGTCCACAGG-GCCATAAGGA---------------GCACCTAG-GAGGACCCTTGCTCCTCTGAGCACATGACCACTGCCCTTT---CTTGGATGTGACTGTGGAGAAAAGATATTGACCTGGGTCTTAGTGAAGAGTCCTAGGTGGCCCCACC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181813221 367 + 182113224 ----------------------------------GGGGCTGCCTA---GAGCTGCTCAGTTCACC----ATGGTGTAAATGTACATACTACTCCATACA---GTT------GAGGCATGTCAGGC--TGTCAAGAGGGTTGGCAGCTTTT---TTGCAGTACAGGAATGA------GAGACACAGAGATCTGAG---------GTATCACCAAGGCAGA-ATCGTCATTTAGGTAT-AAATTCTTTCTTC---TCTTCAGGCAAGGCACTTAGAAGCAGATAATAGTCAGGATAGAGGCAGCTCTAAATT-TTGTGGCTGCTT-----------------CCATAAGGA---------------GTATATCAAGGAAACTC--AGTCCTCTTACTATATGGACACTATCCACT---TTAAGA-GTAACTT-GCAGGAAAGCCATCAAGTAATGGCTTTACAAGGAACACAGAACATTCTCCT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47627534 425 + 47698779 GGT----------------TGGGCT--G-GTGACGCAGCTGCCTT---GGGCCGCTCAGCCCACTCTGTGTGTGGGGAGTTGAGGTGCAGCCACACAC-CCTGCA------AGGCTGTGATGGGGGCTCGACAGGGTTGGAGATGCCTCCCCACCACGGGACAGGGATGGCGGGATGGGGCTTGGAG--GTGAGACCTGGTGCGTGCCCTCAAGCTGTCGTGTGTCCCTCAGACACAAGATTCCCCCTCT---TGCCCAGACAATGCACTCAGAAGCAGATGGTGGGAGGG-----------------TTCCTGCCACTGACC-TGTGGGTGCTCAGG-GGCACGAGAGTGGTGGCCAGTGCCAGCGCCCAGCATGAACACCTGCTTCTCCAGCCACATGAACATCATCCTCT---ATGGGATACGACTTTTAGGAAAAGCCATTGA-TTGGGCCTTGGCAAGGAGTGCAGG-TGGCCCCACC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 266565 367 - 397369 AGCCC--------------AGCATTGTGTGGGGTCTGGGGACCTCCCTGGGCCACAGGGCTCTCTC--TGTG------------------------GCTCCTGCA------AGGGCACGATGGGCTCTGACTTGGGGGGG-------TGT---CCACCCTATCGG--T--------CGGACCTCAGGTGGCCA-----------------CCAAGCGGAGCGCCCTCCTGAGAACA--GGAGCTCTCCCTCCACGCCCAGACACCGTGC-CAGCAGCAGGCGGTAGTAGGG---AGCAGGGCTCCGGGCT-CTGCAGCTGG---TGGGGGTTGTCAGGAGTCCCGAGGT--------------------TGCTGGGGACACCTGCTCCCACAACAGTGTGAGCACCTGCCTCTGTCCCTGGGCATG-CTCTTGGGGGAA-CTGCTGAACTGCACTTCATGAGAGAATG-GGGCCAGCCCCACC i dasNov3.JH569290 I 4 I 1914 e proCoq1.NW_012150197v1 1881579 868 - 2029793 I e micMur3.chr18 56886507 1308 + 57149010 I a score=3073874.000000 s hg38.chr20_KI270870v1_alt 134452 326 + 183433 TGTGT------GTTAGGTA-CTGCCGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGAAGTATCTC--CTCTGCTGTTGATGCCACTCACAGTCCAATGCTGTGCTTATCCCCGTTGAGGCCTAGAGCTGCTGTGGGTCTGTCACTCTGGCCACCTGAGTGGCCACTTGCCCACCGCACTGAACCTGAGCTCTACCTGATGCTTTGCTGCCACTGAGACAAGGAGCTGGAGCCCCAAGTGG-CCACTTGAACAGCTGCCAACCCAGGAAGGAGAGGCAGGCCATCTTCAGTTCT----CTTGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT s panTro5.chr20 66460543 326 + 66533130 TGTGT------GTTAGGTA-CTGCCAGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGAAGTATCTC--CTCTGCTGTTGATGCCACTCACAGCCCAATGCTGTGCTTATCCCCCTCGAGGCCTGGAGCTTCTGTGGGTCTGTCACTCCGGCCACCTGAGTGGCCACTTGCCCACCGCACTGAACCTGAGCTCTACCTGATGCTTTGCTGCCACTGAGACAAGGAGCTGGAGCCCCAAGTGG-CCACTTGGACAGCTGCCAACCCAGGAAGGAGAGGCAGGCCATCTTCAGTTCT----CTTGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62135591 326 + 62195757 TGTGT------GTTAGGTA-CTGCCGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGAAGTATCTC--CTCTGCTGTTGATGCCACTCACAGCCCAATGCTGTGCTTATCCCCGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCCGGCCACCTGAGTGGCCACTTGCCCACCGCACTGAACCTGAGCTCTACCTCATGCTTTGCTGCCACCGAGACAAGGAGCTGGAGCCCCAAGTGG-CCACTTGGACAGCTGCCAACCCAGGAAGGAGAGGCAGGCCATCTTCAGTTCT----CTTGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 524662 326 - 578057 TGTGT------GGTAGGTA-CTGCCGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGAGTCACTCACAGATGCCATCGGGGAGTATCTC--CTCTGCTGTTGATGCCACTCACAGCCCAATGCTGTGCTTATCCCCGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCCGGCCACCTGAGTGGCCACTTGCCCACCGCACTGAACCTGAGCTCTACCTGATGCTTTGCTGCCACTGAGACAAGGCGCTGGAGCCCCAAGTGG-CCACTTGAACAGCTGCCAACCCAGGAAGGAGAGGCAGGCCATCTTCAGTTCT----CTTGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110046998 327 - 110113093 TGCGT------GTGAGGTACCTGCCGGCCCCTTGGGAGTTACACCCCCACCTG----------------------------------------------ACACTCACTCCCAGACGCCATCGGGGAGTGTCTC--CTCTGCTGTTGGTGCCACTCACAGACCAATGCTGTGCTTATCCCCGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCTGGCCACGTGAATGGCCACTTGCCCACCGCACTGAACCTGAGCTCTACCTGCTGCTTTCCTGCCACGGAGACAAGGAGCTGGAGCCCCAAGTGG-CCACTTGAACAGCTGCCAACCCAGGAAGGAGAGGCAGGCCATCTTCAGTTCT----CCTGGC--------------------------------------------------TGGCCGGCAGGG--------------------------------------TAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92780794 326 - 92844088 TGTGT------GTTAGGTACCTGCCGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGGAGTATCTG--CCCTGCTGCTGATGCCACTCACAGCCCAATGCTGTGCTTATCCCCGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCTGG-CACCTGAGTGGCCACTTGCCCACTGCACTGAACCGGAGCTCTACCCGATGCTTTCCTGCCACTGAGACAAGGAGCTGGAGCCCCACGTGG-CCACTTGAACAGCTACCAACCCAGGAAGGAGAGGCAGGCCATCTTCAGTTCT----CTGGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96446849 326 + 96509753 TGTGT------GTTAGGTACCTGCCGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGGAGTATCTG--CCCTGCTGCTGATGCCACTCACAGCCCAATGCTGTGCTTATCCCCGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCTGG-CACCTGAGTGGCCACTTGCCCACTGCACTGAACCGGAGCTCTACCCGATGCTTTCCTGCCACTGAGACAAGGAGCTGGAGCCCCACGTGG-CCACTTGAACAGCTACCAACCCAGGAAGGAGAGGCAGGCCATCTTCAGTTCT----CTGGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16917811 326 - 16982598 TGTGT------GTTAGGTACCTGCCGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGGAGTATCTG--CCCTGCTGCTGATGCCACTCACAGCCCAATGCTGTGCTTATCCCCGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCTGG-CACCTGAGTGGCCACTTGCCCACTGCACTGAACCGGAGCTCTACCCGATGCTTTCCTGCCACTGAGACAAGGAGCTGGAGCCCCACGTGG-CCACTTGAACAGCTACCAACCCAGGAAGGAGAGGCAGGCCATCTTCAGTTCT----CTGGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3720589 326 - 3785965 TGTGT------GTTAGGTACCTGACGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGGAGTATCTG--CCCTGCTGCTGATGCCACTCACAGCCCAATGCTGTGCTTATCCCCGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCTGG-CACCTGAGTGGCCACTTGCCCACCGCACTGAACCGGAGCTCTACCCGATGCTTTCCTGCCACTGAGACAAGGAGCTGGAGCCCCACGTGG-CCACTTGAACAGCTACCAACCCAGGAAGGACAGGCAGGCCACCTTCAGTTCT----CTGGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90298829 326 - 90373283 TGTGT------GTTAGGTACCTGCCGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGGAGTATCTG--CCCTGCTGCTGATGCCACTCACAGCCCAATGCTGTGCTTATCCCCGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCCGG-CACCTGAGTGGCCACTTGCCCACTGCACTGAACCGGAGCTCTACCCGATGCTTTCCTGCCACTGAGACAAGGAGCTGGAGCCCCACGTGG-CCACTTGAACAGCTACCAACCCAGGAGGGAGAGGCAGGCCATCTTCGGTTCT----CTGGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113124 326 - 179258 TGTGT------GTTAGGTACCTGACGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGGAGTATCTG--CCCTGCTGCTGATGCCACTCACAGCCCAATGCTGTGCGTATCCCTGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCTGG-CACCTGAGTGGCCACTTGCCCACCGCACTGAACCGGAGCTCTACCCGATGCTTTCCTGCCACTGAGACAAGGAGCTGGAGCCCCACGTGG-CCACTTGAACAGCTACCAACCCAGGAAGGAGAGGCAGGCCATCTTCAGTTCT----CTGGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5588918 326 - 5823884 TGTGT------GTTAGGTACCTGCCGGCCCCTTGGGAGTTATACCCCCACCTG----------------------------------------------AGACTCACTCACAGATGCCATCGGGGAGTATCTG--CTCTGCTGCTGATGCCACTCACAGCCCAATGCTGTGCTCATCCCCGTCGAGGCCTGGAGCTGCTGTGGGTCTGTCACTCTGG-CACTTGAGTGGCCACTTGCCCACCGCACTGAACCGGAGCTCTACCCGATGCTTTCCTGCCACTGAGACAAGGAGCTGGAGCCCCATGTGG-CCCCTTGAACAGCTGTCAACCCAGGAAGGAGAGGCAGGCCATCTTCGGTTCT----CTGGGC--------------------------------------------------TGGCCAGCAAGG--------------------------------------TAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70073 297 + 372756 -GTGT------GTTA-GTACCTGCTGGCCCCGAGGGAGTTACACCCCCACCTG----------------------------------------------AGACTTGCTCACAGATGCCATCAGG-AGTATCTG--CTCTGCTATTA--------------------------TTATCCCTATCGAGGCCTGCAGCCACTGTGGGT-TGTCACCCTAGCCACCCGAGTGTCCACTTGCCCACCGCACTGACCCTAAGCTCTACCCGCGGCTTTCCTGCCACTGACACAAGGAGTTGGAGCCCCAAGTGG-CCACTTGAACAGCCACCAACCCAGGAAGGAGAGGCAGGCTGTCTTCGGTTCT----CTGGGC--------------------------------------------------TGCACAGCAAAG--------------------------------------TAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16305642 297 + 16356641 -GTGT------GTTA-GCACGTGCCGGCCCC-AGGGAGTTACACCCTCACCTG----------------------------------------------AGACTTGCTCACAGATGCCATCAAG-AGTATCTG--CTCTGCTGCTA--------------------------TTATCCCCCTCGAGGCCTGGAGCCACTGTGGGTCTGTCACCCTCGCCACCTGAGTGGCCACTTGCCCACCACGCTGACCGTGAGCTCTACCTGCTGCTTTCCTGCCACTGACACAAGGAGTTGGAGCCCCAAGTGG-CCACTTGAACAGCTGCAAACTCAGGAAGGAGAGGCAGGCCACCTTCAGTTCT----CTGGGC--------------------------------------------------TGTACAGCAAAG--------------------------------------TAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1174696 296 + 1231380 -GTGT------GTTA-GCACCTGCCGGCCCC-AGGG-GTTATACTGCCACCTG----------------------------------------------AGACTTGCTCACAGATGCCATCAAG-AGTATCTG--CTCGGCTGTTA--------------------------TTACCCCCACCAAGGCCTGGAGCCACTGTGGGTGTGTCACTGTAGCCACCTGAGTGGCCACTTGCCCACCGCTCTGACCCTGAGCTCCACCCGCTGCTTTCCTGCCACTGACACAAGGAGTTGGAGCCCCAAGTGG-CCACTTGAACAGCTGTCAAACCAGGAAGGAGAGGCAGGCTATCTTCAGTTCT----CTGGGC--------------------------------------------------TGTACAGAAAAG--------------------------------------TAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2706609 219 + 11732439 -AAGT------GTTA-GTACCTGCCAGCCCCGAGGGAGTTACACCCCCACCTG----------------------------------------------AGACTTGCTCACAGACGCCGTCAGG-AATATCTG--CCCTGCTGTTA--------------------------TTATCCCCATCGAGGCCTGGAGCCGCGGTGGGTCTGTCACCCTAGCCACCTG-------------------------------------------------------------------------------AGTGG-CCATTTGAACAGCTGCCAACCCAGGAAGGAGAGGCAGGCCGTCTTCAGTTCT----CTGGGC--------------------------------------------------TGTACAGCAAAG--------------------------------------TAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22870184 367 + 22939663 TCTGT------GTCAGGTACCTGCTGACTTCGTGGGAGT--CACTTGCACTGG----------------------------------------------AGACCCACTCACAG-TGCCATTGAAGTGTGTCCT--CATCACCACTGGTGT------CAGCCCAGAGCTTTGCTTGTCCCCACTGAGGCCTGGGGCTGCTGTGGGTCTGTCACCCAGC-CACCTAAGTGGCCAC-TGCCCATAGCACTGGACCTGAGTGCTGCCAGATGCTTATCTGCCTCTGAGACAAGGAGTGGGTGACCCAGGTGTCCCCCCCAAATAGCTGCCAGTCCAGGAAGGAGTGACAGGCTGTCCTCAGTTCT----CTGGACTTAGCCTTCTGGAGAGTAGGGGCATCCTGTTGGCAATATGTCCCCATGGATGGAAGGCACAG--------------------------------------TGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181813588 328 + 182113224 -GCAT------TCTAGGCACTGGCTTGTTCTTGGGAAGCCACAGACCCTCCCA----------------------------------------------AGA----CTCACAGGTGCTGTTGAG-TATATCTGCACCTCACCCCTGGTGCCACTCATGGCTCA--------------------GAGGCCTAG-------GTTGTTCTGT------GG-CTGCTGAGTGACCAC-CACTTTCTGTACTAAAC-----CTCTGCTGGATGTTTCCTTGACATGAAGACAAGGAGTAGAATTCCTGAGTCT-CAGACTGAGCTTCTTTCTACT--GAAAGCATGGAGGAATTATTCTCAGTTCC----CTGTACTTGGACTTC-----------------------------------------TGGACAGTAGGGCTACCATGGTGGTAACGTAGCCCTACTACTGTAATGTACAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47627959 343 + 47698779 TGCCTGGAGAAGCTGTGCCTCAGCGGGCCCCGTGGGGATGCCAGTCCCACTTGTGCTGGGGCCTGGCAGGACCATCCCCGTGTGCATGCACTCCCTGCCAGCCTTATTCACAGGTGCCACTGGGG-----TTG--CACCA-----------------GACTCCAACTTGCGCTCGTGGGCATCGAGGCCCGAGGCCACTGTGGG---GCCATACTGCCC-------TGACCAC-CACCTACAGTGGTGGGCCTGGGTTCTGGC--ACATTTGCCCAAAGCTGAG--AAGGAG-TGGAGCCACAGGCAG-CCACCCGAGCAGCTGCAAACCCTGGAAGGAGAAGCA--CTACCCTTACTCTTTGCACTTGGC--------------------------------------------------CTCCCAAGAGAG--------------------------------------CAT i canFam3.chr24 C 0 I 865 e proCoq1.NW_012150197v1 1881579 868 - 2029793 I e micMur3.chr18 56886507 1308 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=386225.000000 s hg38.chr20_KI270870v1_alt 134778 43 + 183433 CC----------------------------------------------------------AATGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAATGTGAGGCT-------- s panTro5.chr20 66460869 43 + 66533130 CC----------------------------------------------------------AATGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAATGTGAGGCT-------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62135917 43 + 62195757 CC----------------------------------------------------------AATGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAATGTGAGGCT-------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 524988 43 - 578057 CC----------------------------------------------------------AATGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAATGTGAGGCT-------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047325 43 - 110113093 CC----------------------------------------------------------AATGTGTGGCCC-------ACAGCGCAAGGAT----------------------------GAAG------GAACCTGAGACT-------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781120 43 - 92844088 CC----------------------------------------------------------AACGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAACCTGAGACT-------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447175 43 + 96509753 CC----------------------------------------------------------AATGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAACCTGAGACT-------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918137 43 - 16982598 CC----------------------------------------------------------AACGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAATCTGAGACT-------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3720915 43 - 3785965 CC----------------------------------------------------------AACGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAACCTGAGACT-------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299155 43 - 90373283 CC----------------------------------------------------------AACGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAACCTGAGACT-------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113450 43 - 179258 CC----------------------------------------------------------AACGTGTGGCCC-------ACAGGGCAAGGAT----------------------------GAAG------GAACCTGAGACT-------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589244 43 - 5823884 CC----------------------------------------------------------AACGTGTGGCCC-------ACAGGGCGCGGAT----------------------------GAAG------GAACCTGAGACT-------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70370 43 + 372756 CC----------------------------------------------------------AATGCGTGGCCC-------ACGGGGTGAGGAT----------------------------GAAG------GAATTTGAGACT-------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16305939 43 + 16356641 CC----------------------------------------------------------AATGCGTGGCCC-------ACGGGGCGAGGAT----------------------------GAAG------GAATTTGAGTCT-------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1174992 39 + 1231380 CC----------------------------------------------------------AA----TGGCCC-------ACGGGGCGAGGAT----------------------------GAAG------GAATTCGAGACT-------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2706828 43 + 11732439 CC----------------------------------------------------------AATGCGTGGCCC-------ACGTGGCGAGGAT----------------------------GAAG------GAATTCGAGACT-------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22870551 101 + 22939663 CCCACTGTGTGGTCTCATAGAGACTGGAGAATAATTTGACAAGTTGGCCTTGGAGGGTCTGATATGTGACCC-------ACAGGGCAAGGAT----------------------------GAGA------GGACCCAAGGCA-------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181813916 92 + 182113224 CC----------------------------------------------------------ACTACATGGTCTCATGAAGACTAGAGAAAGATTTGGTGGGTCAATGGCTTGAGAGCCAAAGAAGTATCCAGTATCTTACACTGTGAGGGA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1881579 868 - 2029793 I e canFam3.chr24 47628302 865 + 47698779 I e micMur3.chr18 56886507 1308 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=72351.000000 s hg38.chr20_KI270870v1_alt 134821 6 + 183433 CCCCAG s panTro5.chr20 66460912 6 + 66533130 CCCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62135960 6 + 62195757 CCCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525031 6 - 578057 CCCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047368 6 - 110113093 CCCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781163 6 - 92844088 CCCCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447218 6 + 96509753 CCCCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918180 6 - 16982598 CCCCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3720958 6 - 3785965 CCCCAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299198 6 - 90373283 CCCCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113493 6 - 179258 CCCCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589287 6 - 5823884 CCCCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70413 6 + 372756 CCCCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16305982 6 + 16356641 CCCCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175031 6 + 1231380 CCCCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2706871 6 + 11732439 CCCCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1882447 6 - 2029793 CCCCAG i proCoq1.NW_012150197v1 I 868 C 0 s otoGar3.GL873542 22870652 6 + 22939663 CCCTAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814008 6 + 182113224 CCTAAG i mm10.chr2 C 0 C 0 e canFam3.chr24 47628302 865 + 47698779 I e micMur3.chr18 56886507 1308 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=869934.000000 s hg38.chr20_KI270870v1_alt 134827 65 + 183433 --------GAGGGCACCCCAAAAAAACTCCTAGGGGCCGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC s panTro5.chr20 66460918 65 + 66533130 --------GAGGGCACCCCAAGAAAACTCCTAGGGGCTGAAGAG----------------AAGGTTGCAAGAGGTGAGGCCAGCCCTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62135966 65 + 62195757 --------GAGGGCACCCCAAGAAAACTCCTAGGGGCCGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525037 64 - 578057 --------GAGGGCA-CCCAAGAAAACTCCTAGGGGCCGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047374 65 - 110113093 --------GAGGGCACTCCAAGAAAACCCCTAGGGGCCGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781169 65 - 92844088 --------GAGGGCACCCCGAGAAAACTCCTAGGGGCTGAAGAG----------------AAGGTTGCAAGAGGTGGAGCCAGCCCTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447224 65 + 96509753 --------GAGGGCACCCCGAGAAAACTCCTAGGGGCTGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918186 65 - 16982598 --------GAGGGCACCCCGAGAAAACTCCTAGGGGCTGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3720964 65 - 3785965 --------GAGGGCACCCCGAGAAAACTCCTAGGGGCTGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299204 65 - 90373283 --------GAGGGCACCCCGAGAAAACTCCTAGGGGCTGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113499 65 - 179258 --------GGGGGCACCCCGAGAAAACTCCTAGGGGCTGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589293 65 - 5823884 --------GAGGGCACCCCGAGAAAACTCCTAGCGGCTGAAGAG----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70419 64 + 372756 --------GAGGA-ACCCCGAGAAAACTCCTAGGGGTTGAAGAC----------------AAGGTTGCAGGAGATAGGGCCAACTCTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16305988 64 + 16356641 --------GAGGA-ACCCCAAGAAAACTCCTAGGGGTCGAAGAC----------------AAGGTTGCAAGAGGTGGGGCCAGCCCTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175037 64 + 1231380 --------GAGGA-ACCTCGAGAAAACTCCTGGCGGTAGAAGAC----------------AAGGTTGCAGGAGATGGGGGCAGCCCTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2706877 64 + 11732439 --------GAGGA-ACCCCGAGAAAACTCCTAGGGGTCGAAGAC----------------AAGGTTGCAGGAGGTGGGGCCAGCCCTGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56887815 65 + 57149010 --------GAGGACACCCCAACAAAACTCCGAAGGCCCACAGAG----------------AAGGCTGCAGGAGGTGGGGCCAGCCCTGC i micMur3.chr18 I 1308 I 4 s proCoq1.NW_012150197v1 1882453 65 - 2029793 --------GAGGGCACCCCAAGAAAACTCCGAGGGGCCAGAGAG----------------AAGGTTGCAGGAGGTGGGACCAGCCCTGC i proCoq1.NW_012150197v1 C 0 I 89 s otoGar3.GL873542 22870658 65 + 22939663 --------GAGAGTGCCCTGTGAGAAATCCAAGGGCCCATAGAG----------------AAGGTTGCAGGAGGTGGGGCCAGCCCTGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814014 85 + 182113224 GAGTCTGGGAAGATACCCTCAAAGG----TTGGGGGGTGGGGGGTGGGACACGCAGAAATAAAGTCAGAAGAAATGATGCCAGCTATGC i mm10.chr2 C 0 C 0 e canFam3.chr24 47628302 865 + 47698779 I e dasNov3.JH569290 266932 1914 - 397369 I a score=492645.000000 s hg38.chr20_KI270870v1_alt 134892 43 + 183433 TGTGCCGCCACAGCCCTTTGGGTGCCAGGCTGTGCCCGGCTTC s panTro5.chr20 66460983 43 + 66533130 TGTGCCGCCATAGCCCTTTGGGTGCCAGGCTGGGCCCGGCTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136031 43 + 62195757 TGTGCCGCCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525101 43 - 578057 TGTGCCGCCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047439 43 - 110113093 TGTGCTGCCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781234 43 - 92844088 TGTGCCGCCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCCGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447289 43 + 96509753 TGTGCCGCCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCCGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918251 43 - 16982598 TGTGCCGCCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCCGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721029 43 - 3785965 TGTGCCACCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCCGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299269 43 - 90373283 TGTGCCGCCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCCGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113564 43 - 179258 TGTGCCGCCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCCGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589358 43 - 5823884 TGTGCCGCCATAGCCCTTTGGGTGCCAGGCTGTGCCCGGCCGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70483 43 + 372756 TGTGCTGTCATAGCCTTTTGGGTGCCAGGCAGTGCCCAGCTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306052 43 + 16356641 TGTGCCGTCGTAGCCTTTTGGGCTCCAGGCAGTGCCCAGCTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175101 43 + 1231380 TGTGCCGTCAGAGCCTTTTGGGCTCCAGGCAGTGCCCAGCTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2706941 43 + 11732439 TGTGCCGTCTTAGCCTTTTGGGTGCCAGGCAGTGCCCAGCTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56887884 43 + 57149010 CCTGCCACAGGACTCCTTTGAGTGCCAGACTGTGCCCAGCTTC i micMur3.chr18 I 4 I 44 s otoGar3.GL873542 22870723 37 + 22939663 ----CCAC--GAGTCCTTTGGGTGCCAGGCTGTGCCTGGCTTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814099 30 + 182113224 ----------CATCCTCTGGGATGCCAGACT---TCTAGCTTC i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1882518 89 - 2029793 I e canFam3.chr24 47628302 865 + 47698779 I e dasNov3.JH569290 266932 1914 - 397369 I a score=434991.000000 s hg38.chr20_KI270870v1_alt 134935 49 + 183433 ATCT--TCCTCCAAGCGAGGAGATGTCCTGTCCCAGTGGCCGGATGTCACA s panTro5.chr20 66461026 49 + 66533130 ATCT--TCCTCCAAGCGAGGAGATGTCCTGTCCCAGTGGCCGGATGTCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136074 49 + 62195757 ATCT--TCCTCCAAGCGAGGAGATGTCCTGTCCCAGTGGCCGGATGTCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525144 49 - 578057 ATCT--TCCTCCAAGCGAGGAGATGTCCTGTCCCAGTGGCCGGATGTCACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047482 49 - 110113093 ATCT--TCCTCCAAGCGAGGAGATGTCCTGTCCCGGTGGCCAGATGTCACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781277 49 - 92844088 ATCT--TCCTCTAAGCGAGGAGATGTCCTGCCCCAGTGGCCAGATGTCACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447332 49 + 96509753 ATCT--TCCTCTAAGCGAGGAGATGTCCTGCCCCAGTGGCCAGATGTCACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918294 49 - 16982598 ATCT--TCCTCTAAGCGAGGAGATGTCCTGCCCCAGTGGCCAGATGTCACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721072 49 - 3785965 ATCT--TCCTCTAAGCGAGGAGATGTCCTGCCCCAGTGGCCAGATGTCACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299312 49 - 90373283 ACCT--TCCTCTAAGCGAGGAGATGTCCTGCCCCAGTGGCCAGATGTCACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113607 49 - 179258 AACT--TCCTCTAAGCGAGGAGATGTCCTGCCCCAGTGGCCAGATGTCACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589401 49 - 5823884 ATCT--TCCTCTAAGCGAGGAGATGTCCTGCCCCAGTGGCCAGATGTCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70526 45 + 372756 GTCT--TCCTCCAAGC---GAGATGTCCTG-CCCAGTGGCCAGGTGTCATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306095 45 + 16356641 GTCT--TCCTCCGAGC---GAGATGTCCTG-CCCAGTGGCCAGATGTCATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175144 45 + 1231380 GTCT--TACTCCGAGC---GAAATGTCCTG-CCCAGTGGCCAGATGTCACG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2706984 45 + 11732439 GTCT--TCCTCCGAGC---GAGATGTCCTG-CTCAGTGGCCAGATGTCACG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22870760 39 + 22939663 TTCTG-TCCTTCGAGC---AAGTTGT-CTACTCCAGAAACCACA------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814129 46 + 182113224 ----TGTCCTTCATAT-AAGAAGTACTATATTTCAAAGGTCAGATACTGCT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1882518 89 - 2029793 I e canFam3.chr24 47628302 865 + 47698779 I e micMur3.chr18 56887927 44 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=431480.000000 s hg38.chr20_KI270870v1_alt 134984 33 + 183433 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC s panTro5.chr20 66461075 33 + 66533130 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136123 33 + 62195757 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525193 33 - 578057 TGTGCTGGTGGAAGACTCCAGTGAGGAAGGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047531 33 - 110113093 TGTGCTGGTGGAAGACTCCGGCGAGGAAGGGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781326 33 - 92844088 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447381 33 + 96509753 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918343 33 - 16982598 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721121 33 - 3785965 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299361 33 - 90373283 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113656 33 - 179258 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589450 33 - 5823884 TGTGCTGGTGGAAGACTCCGGTGAGGAAGGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70571 31 + 372756 TGTTCTGGTAGAAGACT--GGCAAGGAAGAGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306140 31 + 16356641 TGTTCTGGTGGAAGACT--GGTGAGGAAGGGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175189 31 + 1231380 TGTTCTGGTGGAAGACT--AGTGAGGAAGGGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707029 31 + 11732439 TGTTCTGGTGGAAGACT--GGTGAGGAAGGGCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56887971 33 + 57149010 TGTGCTGGTGGAAGACTCTGGCAAGGAAGGGCC i micMur3.chr18 I 44 C 0 s proCoq1.NW_012150197v1 1882607 33 - 2029793 TGTGCTGGTGGAAGACTCTGGCAAGGAAGGGCC i proCoq1.NW_012150197v1 I 89 I 70 s otoGar3.GL873542 22870799 33 + 22939663 TGTATTGGTGGGAGACTCTGGCAAGGGTGGGTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814175 10 + 182113224 TGTATAGATG----------------------- i mm10.chr2 C 0 C 0 e canFam3.chr24 47628302 865 + 47698779 I e dasNov3.JH569290 266932 1914 - 397369 I a score=4568.000000 s hg38.chr20_KI270870v1_alt 135017 1 + 183433 A s panTro5.chr20 66461108 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136156 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525226 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047564 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781359 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447414 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918376 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721154 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299394 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113689 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589483 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70602 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306171 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175220 1 + 1231380 G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707060 1 + 11732439 G i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56888004 1 + 57149010 A i micMur3.chr18 C 0 I 131 s otoGar3.GL873542 22870832 1 + 22939663 A i otoGar3.GL873542 C 0 I 5 e proCoq1.NW_012150197v1 1882640 70 - 2029793 I e canFam3.chr24 47628302 865 + 47698779 I e mm10.chr2 181814185 0 + 182113224 C e dasNov3.JH569290 266932 1914 - 397369 I a score=938033.000000 s hg38.chr20_KI270870v1_alt 135018 88 + 183433 GCAGCATGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCACCACTGCAAAGTGCCTTTGAGCAGCAGGTGATCTGGAC-ACAAGCACTG s panTro5.chr20 66461109 88 + 66533130 GCAGCACGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCACCACTGCAAAGTGCCTTTGAGCAGCAGGTGATCTGGAC-ACAAGCACTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136157 88 + 62195757 GCAGCACGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCTCCACTGCAAAGTGCCTTTGAGCAGCAGGTGATCTGGAC-ACAAGCACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525227 88 - 578057 GTAGCACGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCACCACTGAAAAGTGCCTTTGAGCAGCAGGTGATCTGGAC-ACAAGCACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047565 88 - 110113093 GCAGCATGGAAAGTGAGACATCCTCCCTGGGGTCTGAGCGCCACTGCAAAGTGCCTGTGAGCAGCAGGTGATCTGGAC-CCAAGCACTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781360 88 - 92844088 GCAGCATGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCGCCACAGCAAAGTGCCCATGAGTAGCAGGTGATCTGGAC-ACAAGCACTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447415 88 + 96509753 GCAGCCCGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCGCCACAGCAAAGTGCCCATGAGTAGCAGGTGATCTGGAC-ACAAGCACTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918377 88 - 16982598 GCAGCACGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCGCCACAGCAAAGTGCCCATGAGTAGCAGGTGATCTGGAC-ACAAGCACTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721155 88 - 3785965 GCAGCACGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCACCACAGCAAAGTGCCCATGAGTAGCAGGTGATCTGGAC-ACAAGCACTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299395 88 - 90373283 GCAGCACGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCGCCACAGCAAAGTGCCCATGAGTAGCAGGTGATCTGGAC-ACAAGCACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113690 88 - 179258 GCAGCACGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCACCACAGCAAAGTGCCCATGAGTAGCAGGTGATCTGGAC-ACAAGCACTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589484 88 - 5823884 GCAGCACGGAAAGTGAGACGTCCTCCCTGGGGTCTGAGCGCCACAGCAAAGTGCCCATGAGTAGCAGGTGATCTGGAC-ACAAGCACTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70603 88 + 372756 TCAGTACAGAAAGTGGGATGTCCTCCCTGGGGTCTGAGCGCCCCAGCAAAGTGCCCATGAGTAGCAGGTGATCTGGAC-ACAAGCACTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306172 88 + 16356641 TCAGTACAGAAAGTGGGATGTCCTCCCTGGGGTCTGAGCACCGCAGCAAAGTGCCCACGAGTAGCAGGTGATCTGGAC-ACAAGGACTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175221 88 + 1231380 TCAGTGCAGAAAGTGGGGTGTCCTCCCTGGGGTCTGAGCACCACAGCCAAGTGCCCATGAGTAGCAAGTGATCTGGAC-ATGAGCCCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707061 88 + 11732439 TCAGTACAGAAAGTGGGATGTCCTCCCTGGGGTCTGAGCGCCGCAGCAAAGTGCCCATGAGTAGCAGGTGATCTGGAC-ACAGGCACTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22870838 85 + 22939663 ATAGCACAGAAAATGAGGGGTCTTTACTGGGGCCTAAGAGCCATGGGTAAGGGCTCT---GTAATAGGCTCTCTAGAC-ACAGACACCA i otoGar3.GL873542 I 5 C 0 s mm10.chr2 181814185 60 + 182113224 ----------AAGTCAGAGG--CTTCCTAGGGACTGGGTGCCATGGAGCAGTAC-----------------TTTGGATAACCAATACCA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1882640 70 - 2029793 I e canFam3.chr24 47628302 865 + 47698779 I e micMur3.chr18 56888005 131 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=309511.000000 s hg38.chr20_KI270870v1_alt 135106 25 + 183433 AACTCTTGCCTGGCTCCTGCAGG--GT s panTro5.chr20 66461197 25 + 66533130 AACTCTTGCCTGGCTCCTGCAGG--GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136245 25 + 62195757 AACTCTTGCCTGGCTCCTGCAGG--GT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525315 27 - 578057 AACTCTTGCCTGGCTCCTGCAGGGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047653 25 - 110113093 AACTCTTGCCTGGCTCCTGCAGG--GT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781448 25 - 92844088 AACTCTTGCCTGGCTCCTGCAGG--GT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447503 25 + 96509753 AACTCTTGCCTGGCTCCTGCAGG--GT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918465 25 - 16982598 AACTCTTGTCTGGCTCCTGCAGG--GT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721243 25 - 3785965 AACTCTTGCCTGGCTCCTGCAGG--GT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299483 25 - 90373283 AACTCTTGCCTGGCTCCTGCAGG--GT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113778 25 - 179258 AACTCTTGCCTGGCTCCTGCAGG--GT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589572 25 - 5823884 AAGTCTTGCCTGGCTCCTACAGG--GT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70691 25 + 372756 ACCTCCTGCCTGGCTCCTGCAGG--GT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306260 25 + 16356641 AACTTCTGTCTGGCTCTCGCAGG--GT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175309 25 + 1231380 AACTCCTGCCTGGCTCCTGCAGG--GT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707149 25 + 11732439 AACTGTTGCCTGGCTCCTGCAGG--GT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1882710 25 - 2029793 AACTCTCGCCTGGCTCCTGCAGG--GT i proCoq1.NW_012150197v1 I 70 I 475 s otoGar3.GL873542 22870923 25 + 22939663 AATCCTTGTCTGGAGCCTCCTCA--GT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814245 24 + 182113224 -AATGCTCACTGCTTCCCATAGG--AT i mm10.chr2 C 0 C 0 e canFam3.chr24 47628302 865 + 47698779 I e micMur3.chr18 56888005 131 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=191900.000000 s hg38.chr20_KI270870v1_alt 135131 28 + 183433 CAGG--GGTCAGGAGGGGTGAGGCACAGAG s panTro5.chr20 66461222 28 + 66533130 CAGG--GGTCAGGAGGGGTGAGGCACAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136270 28 + 62195757 CAGG--GGTCAGGAGGGGTGAGGCACAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525342 28 - 578057 CAGG--GGTCAGAACGGGTGAGGCACAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047678 28 - 110113093 CAGG--GGTCGGGAGGGGTGAGGCGCAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781473 30 - 92844088 CAGGATGCTCGTGAGGGGTGAGGCACAGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447528 30 + 96509753 CAGGATGCTCGTGAGGGGTGAGGCACAGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918490 30 - 16982598 CAGGATGCTCGTGAGGGGTGAGGCACAGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721268 30 - 3785965 CAGGATGCTCGTGAGGGGTGAGGCACAGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299508 30 - 90373283 CAGGATGCTTGTGAGGGGTGAGGCACAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113803 30 - 179258 CAGGATGCTCGTGAGGGGTGAGGCACAGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589597 30 - 5823884 CAGGATACTCGTGAGGGGTGAGGCACAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70716 28 + 372756 CAGGATGCCTGTGAGGA--GAGTTGCAGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306285 28 + 16356641 CAGGATGCCCGTGAGAG--GCGGCACAGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175334 28 + 1231380 CAGGAAACCCGTGAGGG--GAGGCGCAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707174 28 + 11732439 CAGGATGCCCGTGAGGG--GAGGCGCAGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22870948 13 + 22939663 -----------------GCAAGGCACAGAG i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181814269 29 + 182113224 -GACACTGTAATTACTGGCAAGATGCAAAG i mm10.chr2 C 0 I 1 e proCoq1.NW_012150197v1 1882735 475 - 2029793 I e canFam3.chr24 47628302 865 + 47698779 I e micMur3.chr18 56888005 131 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=194368.000000 s hg38.chr20_KI270870v1_alt 135159 19 + 183433 AGCA-GGCCTGACGGGGGAT- s panTro5.chr20 66461250 19 + 66533130 AGCA-GGCCTGACGGGGGAT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136298 19 + 62195757 AGCA-GGCCTGACGGGGGAT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525370 19 - 578057 TGCA-GGCCTGACGGGGGAT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047706 19 - 110113093 AGCA-GGCCTGACGGGGGAT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781503 20 - 92844088 AGCAGGCCCTGACGGGGGAT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447558 20 + 96509753 AGCAGGCCCTGACGGGGGAT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918520 19 - 16982598 AGCA-GCCCTGACGGGGGAT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721298 19 - 3785965 AGCA-GCCCTGACGGGGGAT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299538 19 - 90373283 AGCA-GCCCTGACGGGGGAT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113833 19 - 179258 AGCA-GCCCTGACGGGGGAC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589627 19 - 5823884 AGCA-GCCCTGACGGGGGAT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70744 19 + 372756 AGCA-GGCCTGATGGAAGAC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306313 20 + 16356641 AGCA-GGCCTGATGGGGGTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175362 19 + 1231380 AGCA-GGCCTGATGGGGGAC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707202 19 + 11732439 AGCA-GGCCTGATGGGGGAC- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56888136 19 + 57149010 AGCA-GACCTGAAGGGGGCT- i micMur3.chr18 I 131 C 0 s otoGar3.GL873542 22870962 17 + 22939663 AGCT-GGCTGGAC--AGGCT- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181814299 17 + 182113224 AGCA-GATCTGAT--GAGAT- i mm10.chr2 I 1 C 0 e proCoq1.NW_012150197v1 1882735 475 - 2029793 I e canFam3.chr24 47628302 865 + 47698779 I e dasNov3.JH569290 266932 1914 - 397369 I a score=382117.000000 s hg38.chr20_KI270870v1_alt 135178 33 + 183433 GGATCTACCCGCAGAATCAGGT-CACCTCCTCCC s panTro5.chr20 66461269 33 + 66533130 GGATCTACCCGCAGAATCAGGT-CACCTCCTCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136317 33 + 62195757 GGATCTACCCGCAGAATCAGGT-CACCTCCTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525389 33 - 578057 GGATCTACCCGCAGAATCAGGT-CACCTCCTCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047725 33 - 110113093 GGATCTACCCGCAGAATCAGGT-CACCTCCTCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781523 33 - 92844088 GGATCTACCCGCACAATCAGGT-CACCTCCTCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447578 33 + 96509753 GGATCTACCCGCACCATCAGGT-CACCTCCTCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918539 33 - 16982598 GGATCTACCCGCACAATCAGGT-CACCTCCTCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721317 33 - 3785965 GGATCTACCCGCACAATCAGGT-CACCTCCTCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299557 32 - 90373283 GGATCTACCCGCAC-ATCAGGT-CACCTCCTCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113852 33 - 179258 GGATCTACCCGCACAATCAGGT-CACCTCCTCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589646 33 - 5823884 GGATCTACTCGCACAATCAGGT-CACCTCCTCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70763 33 + 372756 GGATCTGACCACAGAATCAGGC-CATCTCCTCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306333 32 + 16356641 GGGTCTGCCTGCAGAATCAAGC-CTTCT-CTCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175381 32 + 1231380 GGATCTGCCCGCAGAATCAGGC-CGTCT-CTCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707221 33 + 11732439 GGATCTGCCCGCAGAGTCAGGC-CATCTCCTCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56888155 33 + 57149010 GAATCCACCTGCAGGATCAGGT-CACCTCCTCCC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22870979 33 + 22939663 GAGTCCACCTGCAGAATCAGGT-CACTTCCTCTC i otoGar3.GL873542 C 0 I 721 s mm10.chr2 181814316 23 + 182113224 GGGTCTACCT------CCAAGT-CAGCCTC---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47629167 32 + 47698779 GGACCCACCTGCACATTCACGCACACCTCCCC-- i canFam3.chr24 I 865 C 0 e proCoq1.NW_012150197v1 1882735 475 - 2029793 I e dasNov3.JH569290 266932 1914 - 397369 I a score=-15005.000000 s hg38.chr20_KI270870v1_alt 135211 3 + 183433 ACT s panTro5.chr20 66461302 3 + 66533130 ACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136350 3 + 62195757 ACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525422 3 - 578057 ACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047758 3 - 110113093 ACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781556 1 - 92844088 A-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447611 1 + 96509753 A-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918572 1 - 16982598 A-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721350 1 - 3785965 A-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299589 1 - 90373283 A-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113885 1 - 179258 A-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589679 1 - 5823884 A-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70796 3 + 372756 ACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306365 3 + 16356641 ACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175413 3 + 1231380 ACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707254 3 + 11732439 ACT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56888188 3 + 57149010 ACT i micMur3.chr18 C 0 I 452 s mm10.chr2 181814339 2 + 182113224 -AT i mm10.chr2 C 0 I 1 s canFam3.chr24 47629199 3 + 47698779 ACT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1882735 475 - 2029793 I e dasNov3.JH569290 266932 1914 - 397369 I e otoGar3.GL873542 22871012 721 + 22939663 I a score=236991.000000 s hg38.chr20_KI270870v1_alt 135214 28 + 183433 CTCTAACATCAGCAGGAACTCACATATT s panTro5.chr20 66461305 28 + 66533130 CTCTAACATCAGCAGGAACTCACATATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136353 28 + 62195757 CTCTAACATCAGCAGGAACTCACATATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525425 28 - 578057 CTCTAACATCAGCAGGAACTCACATATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047761 28 - 110113093 CTCTGACATCAGCAGGAACTCACATATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781557 28 - 92844088 CTCTAACATCAGCAGGAACTCACATATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447612 28 + 96509753 CTCTAACATCAGCAGGAACTCACATATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918573 28 - 16982598 CTCTAACATCAGCAGGAACTCACATATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721351 28 - 3785965 CTCTAACATCAGCAGGAACTCACATATT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299590 28 - 90373283 CTCTGACATCAGCAGGAACTCACATATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113886 28 - 179258 CTCTAACATCAGCAGGAACTCACATATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589680 28 - 5823884 CTGTAACATCAGCAGGAACTCACATATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70799 28 + 372756 CTGCAACACCAGCAGGAACTCACATCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306368 28 + 16356641 CTGTAATGCCAGCAGGAACTCACATCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175416 28 + 1231380 CTGTCACACCAGCAGGAACTCACATCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707257 2 + 11732439 CT-------------------------- i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181814342 19 + 182113224 ---------AATCAACACCTGCCATGAT i mm10.chr2 I 1 C 0 s canFam3.chr24 47629202 25 + 47698779 --CTGACACCAGCAGGAACTCACTCTC- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1882735 475 - 2029793 I e micMur3.chr18 56888191 452 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I e otoGar3.GL873542 22871012 721 + 22939663 I a score=276514.000000 s hg38.chr20_KI270870v1_alt 135242 29 + 183433 TT-TTCCTCAGTGGACATTCGGAAGAA--AAT----- s panTro5.chr20 66461333 29 + 66533130 TG-TTCCTCAGTGGACATTTGGAAGAA--AAT----- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136381 29 + 62195757 TG-TTCCTCAGTGGACATTTGGAAGAA--AAT----- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525453 28 - 578057 TT-TTCCTCAGTGGACATTCGGAAG-A--AAT----- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047789 28 - 110113093 TT-TT-CTCAGTGGACATTCAGAAGAA--AAT----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781585 28 - 92844088 T--TTCCTCAGTGGACATTCGGAAGAA--AAT----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447640 28 + 96509753 T--TTCCTCAGTGGACATTCGGAAGAA--AAT----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918601 28 - 16982598 T--TTCCTCAGTGGACATTCGGAAGAA--AAT----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721379 28 - 3785965 T--TTCCTCAGTGGACATTCGGAAGAA--AAT----- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299618 28 - 90373283 T--TTCCTCAGTGGACATTTGGAAGAA--AAT----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113914 28 - 179258 T--TTCCTCAGTGGACATTTGGAAGAA--AAT----- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589708 28 - 5823884 T--TTCCTCACTGGACATTCGGAAGAA--AAT----- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70827 28 + 372756 T--TTCCTCAGTAGACATTCGGAAGAA--AAT----- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306396 28 + 16356641 T--TTCCTCAGTGGACATTTGGAAGAA--AAT----- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175444 28 + 1231380 T--TTCCTCAGTGGACATTCGGTAGAA--AAT----- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707259 20 + 11732439 ----------GTGGACATTCGGAAGAA--AAT----- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1883210 28 - 2029793 T--TTCCTCAGTGGACATTCAGGAGGA--AAT----- i proCoq1.NW_012150197v1 I 475 I 8 s mm10.chr2 181814361 19 + 182113224 ---TTTC--------CATTTGGGAGAA--AAT----- i mm10.chr2 C 0 I 9 s canFam3.chr24 47629227 36 + 47698779 -TCTTCCACCACGGACGTTCAGGAAGAGTAATTTAAG i canFam3.chr24 C 0 C 0 e micMur3.chr18 56888191 452 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I e otoGar3.GL873542 22871012 721 + 22939663 I a score=288500.000000 s hg38.chr20_KI270870v1_alt 135271 21 + 183433 AACATCCGTGCTTGTAATATT s panTro5.chr20 66461362 21 + 66533130 AACATCCGTGCTTGTAATATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136410 21 + 62195757 AACATCCGTGCTTGTAATATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525481 21 - 578057 AACATCCGTGCTTGTAATATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047817 21 - 110113093 AACATCCGTGCTTGTAATATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781613 21 - 92844088 AGCATCCGTGCTTGTAATATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447668 21 + 96509753 AGCATCCGTGCTTGTAATATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918629 21 - 16982598 AGCATCCGTGCTTGTAATATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721407 21 - 3785965 AGCATCCGTGCTTGTAATATT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299646 21 - 90373283 AGCATCCGTGCTTGTAATATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113942 21 - 179258 AGCATCCGTGCTTGTGATATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589736 21 - 5823884 AGCATCCGTGCTTGTAATATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70855 21 + 372756 GACATCCATGCTTGTAACATT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306424 21 + 16356641 GACATCCGTGCTTGTAATATT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175472 21 + 1231380 GACATCCGTGCTTGTAATATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707279 21 + 11732439 GACATCCATGCTTGTAATATC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56888643 21 + 57149010 AACGTCCATGCTTGTAATCTT i micMur3.chr18 I 452 C 0 s proCoq1.NW_012150197v1 1883246 21 - 2029793 AACATCCATACTTGTAATGTT i proCoq1.NW_012150197v1 I 8 C 0 s mm10.chr2 181814389 21 + 182113224 AAAGTCCATGTTAATAATATT i mm10.chr2 I 9 C 0 s canFam3.chr24 47629263 20 + 47698779 AAAACCCATACTTGT-ATATC i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 266932 1914 - 397369 I e otoGar3.GL873542 22871012 721 + 22939663 I a score=1003913.000000 s hg38.chr20_KI270870v1_alt 135292 77 + 183433 AAAGTGGAA--TTTT---GTACCACCTTATGTGATACATTCGTCAAATAGTTTTGGGTGTGTAAAGTT-GGA--------CTTTTGTGTTT------- s panTro5.chr20 66461383 77 + 66533130 AAAGTGGAA--TTTT---GTACCACCTTATGTGATACATTCGTCAAATAGTTTTGGGTGTGTAAAGTT-GGA--------CTTTTGTGTTT------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136431 77 + 62195757 AAAGTGGAA--TTTT---GTACCACCTTATGTGATACATTCGTCAAATAGTTTTGGGTGTGTAAAGTT-GGA--------CTTTTGTGTTT------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525502 77 - 578057 ACAGTGGAA--TTTT---GTACCACCTTATGTGATACATTCGTCAAATAGTTTTGGGTGTGTAAAGCT-GGA--------CTTTTGTGTTT------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047838 77 - 110113093 AAAGTGGAA--TTTT---GTACCACCTTATGTGATACATTCATCAAATAGTTTTGGGTGTATCAAGTT-GGA--------CTTCTGTGTTT------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781634 77 - 92844088 AAAGTGGAA--TTTT---GTACCACCTTACGTGATGCATTCATCACATAGTTTTGGGTGTATAAAGTT-GGA--------CTTTTGTGCTT------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447689 77 + 96509753 AAAGTGGAA--TTTT---GTACCACCTTACGTGATGCATTCATCACATAGTTTTGGGTGTATAAAGTT-GGA--------CTTTTGTGCTT------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918650 77 - 16982598 AAAGTGGAA--TTTT---GTACCACCTTACGTGATGCATTCATCACATAGTTTTGGGTGTATAAAGTT-GGA--------CTTTTGTGCTT------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721428 77 - 3785965 AAAGTGGAA--TTTT---GTACCACTTTACGTGATGCATTCATCACATAGTTTTGGGTGTATAAAGTT-GGA--------CTTTTGTGCTT------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299667 77 - 90373283 AAAGTGGAA--TTTT---GTACCACCTTACGTGACGCATTCATCACATAGTTTTGGGTGTATAAAGTT-GGA--------CTTTTGTGCTT------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 113963 77 - 179258 AAAGTGGAA--TTTT---GTACCACCTTACGTGATGCATTCATCACATAGTTTTGGGTGTATAAAGTT-GGA--------CTTTTGTGCTT------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589757 77 - 5823884 AAAGTGGAA--TTTT---GTACCACCTCACGTGATGCGCTCATCACATAGTTTTGTGTGTATAAAGTT-GGA--------CTTTTGTGCTT------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70876 77 + 372756 AAAGTGGGA--TATT---TTACTGCCTTATATGATACATTCATCTAATATTTTTGGGTAGATAAAGCT-GGA--------CTTCTGTGTTT------- i calJac3.chrUn_GL286459 C 0 I 7 s saiBol1.JH378156 16306445 78 + 16356641 AAAGTGGAATTTTTT---TTACCACCTTATGTGATA-ATTCATCAAGTATTTTTGGGCATATAAAGTT-GGA--------CTTTTGTGTTT------- i saiBol1.JH378156 C 0 I 7 s cebCap1.NW_016107870v1 1175493 77 + 1231380 AAAGCGGAA--TTTT---TTACCACCTTATGTGATACATTCACCAAGTATTTTTGGGTATATAAAGCTGGGA--------CTTTTGTG-TT------- i cebCap1.NW_016107870v1 C 0 I 7 s aotNan1.NW_018500483v1 2707300 74 + 11732439 AAAGTGGAA--TTTT---TTACCACCTTATGTGATACAGTCGTCAAATATTTTCGGGTGTATAAAGTT-GGA--------CTTTTGTG---------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56888664 77 + 57149010 AGAGTGGAA--TTTT---TTACCACATTATGTGACACATTCATCAAACATTTTTGGGTGTATAAAGCC-GGA--------CTTTTGTGTTT------- i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1883267 78 - 2029793 AAAGTGGAA-TTTTT---TTACCACGTTATGTGATACATTTGTCAAACATTTTTGGGTGTATAAAGTC-GGA--------CTTTTCTGTTT------- i proCoq1.NW_012150197v1 C 0 I 169 s otoGar3.GL873542 22871733 88 + 22939663 AAAGTGGAG--TTTTAAAAAACCGCATTATGTGGTACATTCATCAAACATTTTAGGGTGTATAAAGTT-GGACTTTTCATCTTTTGTATTT------- i otoGar3.GL873542 I 721 C 0 s mm10.chr2 181814410 76 + 182113224 ATAGTATAA--TTTC----TACCACTGTGTGGGATATATTCATGAGACAGTTTTGGATGCATAAACCT-TGA--------TTTTTTTTTCT------- i mm10.chr2 C 0 I 11 s canFam3.chr24 47629283 78 + 47698779 AAAGTGTAG--TTTT----TACC-TTCTACATGATG--TTTGTCAAACA-TTTTGGACGCATCAAGC--GGG--------CTTCTGGGTTTTGTGTCT i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 266932 1914 - 397369 I a score=89024.000000 s hg38.chr20_KI270870v1_alt 135369 20 + 183433 CTCCTCCTTAC----TCTCTGCTG s panTro5.chr20 66461460 20 + 66533130 CTCCTCCTTAC----TCTCTGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136508 20 + 62195757 CTCCTCCTTAC----TCTCTGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525579 20 - 578057 CTCCTCCTTAC----TCTCTGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047915 20 - 110113093 CTCCTCCTTAC----TCTCTGCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781711 15 - 92844088 ---CTCCTTA------GTCTGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447766 15 + 96509753 ---CTCCTTA------GTCTGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918727 15 - 16982598 ---CTCCTTA------GTCTGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721505 15 - 3785965 ---CTCCTTA------GTCTGCTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299744 15 - 90373283 ---CTCCTTA------GTCTGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114040 15 - 179258 ---CTCCTTA------GTCTGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589834 18 - 5823884 CTCCTCCTTA------GTCTGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70960 14 + 372756 CTCCTCCTTAA----TCT------ i calJac3.chrUn_GL286459 I 7 C 0 s saiBol1.JH378156 16306530 20 + 16356641 CTCCTCCTTAC----TCTCTGCTG i saiBol1.JH378156 I 7 C 0 s cebCap1.NW_016107870v1 1175577 20 + 1231380 CTCCTCCTTAC----TCTCTGCTG i cebCap1.NW_016107870v1 I 7 C 0 s aotNan1.NW_018500483v1 2707374 10 + 11732439 ----------T----TCTCTGCCG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56888741 20 + 57149010 CCCGTCCTCAC----CCTCTGCTG i micMur3.chr18 C 0 I 538 s otoGar3.GL873542 22871821 20 + 22939663 ACCATCCTTAT----CCTCTGCTG i otoGar3.GL873542 C 0 I 17 s mm10.chr2 181814497 20 + 182113224 ----TTCTTATTTTATCTTTGTTG i mm10.chr2 I 11 I 16 s canFam3.chr24 47629361 20 + 47698779 CCCATCATAAC----CCTTGGCCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1883345 169 - 2029793 I e dasNov3.JH569290 266932 1914 - 397369 I a score=1368754.000000 s hg38.chr20_KI270870v1_alt 135389 144 + 183433 -----------------TAAGCCACTGGCTGTGTGAACTCTGCAGTCATGCTATACAACAGCCAGGCCTGGCATGGCCAGCGCCAT--CTGCTCTGCAGCAGGTGTGCAAAAAGGCCTCTGTTCATTT-------------ACCAGCCCATGGTGGCCACGCTTTGTGAGGGC-AAG s panTro5.chr20 66461480 144 + 66533130 -----------------TAAGCCACTGGCTGTGTGAACTCTGCAGTCATGCTACACAACAGCCAGGCCTGGCACGGCCAGCGCCAT--CTGCTCTGCAGCAGGTGTGCAAAAAGGCCTCTGTTCATTT-------------ACCAGCCCATGGTGGCCACCCTTTGTGAGGGC-AAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136528 144 + 62195757 -----------------TAAGCCACTGGCTGTGTGAACTCTGCAGTCATGCTACACAACAGCCAGGCCTGGCATGGCCAGCGCCAT--CTGCTCTGCAGCAGGTGTGCAAAAAGGCCTCTGTTCATTT-------------ACCAGCCCATGGTGGCCACCCTTTGTGAGGGC-AAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525599 145 - 578057 -----------------TAAGCCACTGGCTGTGTGAACTCTGCAGTCATGCTACACAACAGCCAGGCCTGGCACGGCCAGCGCCAT--CTGCTCCGCAGCAGGTGTGCAAAAAGGCCTCTGTTCATTT-------------ACCAGCCCATGGTGGCCACCCTTTGTGAGGGCAAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110047935 144 - 110113093 -----------------TAAGCCACTGGCTGCGTGAACTCTGCAGTCACGTTACCCAACAGCCAGGCCTGGCACGGGCTGCGCCAT--CTGCTCTGCAGCAGGTGTGCAAAAAAGCCTGTGTTCATGT-------------ACCAGCCCATGGTGGCAACCCTTTGTGAGGGC-GAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781726 144 - 92844088 -----------------TAAGCTACTGGCTGTGTGAACTCTGAAGTCGCGCTACACAACAGCCAGGCCTGGCATGGCCAGCGCCAT--CTGCTATGCAGCAGGTGTGCAAAAAAGCCTCTGTTCATTT-------------ACCAGCCCATAGTGGCAACCCTTTGTGAGGGC-AAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447781 144 + 96509753 -----------------TAAGCTACTGGCTGTGTGAACTCTGAAGTCGCGCTACACAACAGCCAGGCCTGGCATGGCCAGCGCCAT--CTGCTATGCAGCAGGTGTGCAAAAAAGCCTCTGTTCATTT-------------ACCAGCCCATAGTGGCAACCCTTTGTGAGGGC-AAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918742 144 - 16982598 -----------------TAAGCTACTGGCTGTGTGAACTCTGAAGTCGCGCTACACAACAGCCAGGCCTGGCATGGCCAGCGCCAT--CTGCTATGCAGCAGGTGTGCAAAAAAGCCTCTGTTAATTT-------------ACCAGCCCATAGTGGCAACCCTTCGTGGGGGC-AAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721520 144 - 3785965 -----------------TAAGCTACTGGCTGTGTGAACTCTGAAGTCACGCCACACAACAGCCAGGCCTGGCATGGCCAGCGCTAT--CTGCTATGCAGCAGGTGTGCAAAAAAGCCTCTGTTCATTT-------------ACCAGCCCATAGTGGCAACCCTTTGTGAGGGC-AAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299759 144 - 90373283 -----------------TAAGCTACTGGCTGTGTGAACTCTGAAGTCACGCTACACAACAGCCAGGCCTGGCATGGCCAGCGCCAT--CTGCTATGCAGCAGGTGTGCAAAAAAGCCTCTGTTCATTT-------------ACCAGCCCATAGTGGCAACCCTTTGTGAGGGC-AAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114055 144 - 179258 -----------------TAAGCTACTGGCTGTGTGAACTCTGAAGTCACGCCACACAACAGCCAGGCCTGGCATGGCCAGCGCCAT--CTGCTATGCAGCAGGTGTGCAAAAAAGCCTCTGTTCATTT-------------ACCAGCCCATAGTGGCAACCCTTTGTGAGGGC-AAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589852 144 - 5823884 -----------------TAAGCTACTGGCTGTGTGAACTCTGAAGTCATGCCACACAACAGCCAGGCCTGGCATGGCCAGCACCAT--CTGCTATGCAGCAGGTGTGCAAAAAGCCCTCTGTTCATTT-------------ACCAGCCCATGGTGGCAACTCCTTGTGAGGGC-AAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 70974 139 + 372756 ---------------------CCGCTGGCTGTGTGAACTCTGCGGTCACGCTACATAATAGCCAGGCTTGGCATGGCCCGCGCAAT--CTGCTATGCAGCAGGTGTGCAGAAA-GCCTCTGTTCATTT-------------ACCAGCCTGTGGTGGCAACCCTAGGTGAGGGC-CAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306550 142 + 16356641 -----------------TAAGCCACTGGCTGTGTGAACTCTGTGGTCACGCTACACAATAGCCAGGCCTGGCATGGCCAGCGCCAT--CTGCTATGCAGC-GGTACTCAGAAA-GCCTCTGTTCATTT-------------ACCAGCCTGTGGGGGCAACCCTAGGTGAGGGC-AAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175597 142 + 1231380 -----------------TCAGCCACTGGCTGTGTGAGCTCTGTGGTCGTGCTACACAATGGCCAGGCCTGGCATGGCCAGCGCCAT--CTGCTATGCAGC-GGTGTGCAGAAA-GCCTCTGTTCATTT-------------ACCAGCCTGTGGTGGCAGCCCTAGGGGAGGGC-AAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707384 141 + 11732439 -----------------TAAGCCACCGGCTGCGTGAACTC--CGGTCACGCTACACAATAGCCAGGCCTGGCGTGGCCGGCGCCAT--CTGCTATGCAGCAGGTGTGCAGAAA-GCCTCTGTTCATTT-------------ACCAGCCTGTGGTGGCAACCCTCGGCGAGGGC-AAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22871858 128 + 22939663 -----------------AAAGCCACTGGCTATGTGAATTCTGCACTCACACTACACAAGCACCAGGCCTGGAGTGGCCAGCACTGT--CTGCCATGTAGCAGGTGCTCAGCAAG--CGCTG-CCGTGT-------------ACTCAGCTGTGGTGGCTGCTCT-------------- i otoGar3.GL873542 I 17 C 0 s mm10.chr2 181814533 86 + 182113224 -----------------AAAGCCACTGGCTAAGT----TCTACACTCA--CCAAACAGGGATCAGGCT--GCAGGG--------------GCCACATAGCAGGTACTCATG-------------------------------------------GGCATGTCTCTGAG--------- i mm10.chr2 I 16 C 0 s canFam3.chr24 47629381 143 + 47698779 GGGCCCACCACCCCTGAGGAGCCTCTGGTTGTGCGAATTGC----------------ACCTCTAGG-------TGCCCAGCGCTGTGGATGGTGTGTCCCAGGCGCTCAGTAA-TCGTCTGTTCATTCCCTCAGATGACGGACCCCTCCCAGGAAACAGCGCTCTTC---------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1883345 169 - 2029793 I e micMur3.chr18 56888761 538 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=421510.000000 s hg38.chr20_KI270870v1_alt 135533 34 + 183433 CTCCCAGCC-CATCCAAGAAGATGAACTGGTCTTA s panTro5.chr20 66461624 34 + 66533130 CTCCCAGCC-CGTCCAAGAAGATGAACTGGTCTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136672 34 + 62195757 CTCCCAGCC-CGTCCAAGAAGATGAACTGGTCTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525744 34 - 578057 CTCCCAGCC-CGTCCAAGAAGATGAACTGGCCTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048079 34 - 110113093 CTCCCAGCC-CGCCCAGGAAGATGGACTGGTCTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781870 34 - 92844088 CTCCCAGCC-CGTCCAAGAAGATGAACTGGTCTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447925 34 + 96509753 CTCCCAGCC-CGTCCAAGAAGATGAACTGGTCTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918886 34 - 16982598 CTCCCAGCC-CGTCCAAGAAGATGAACTGGTCTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721664 34 - 3785965 CTCCCAGCC-CGTCCAAGAAGATGAACTGGTCTTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299903 34 - 90373283 CTCCCAGCC-CGTCCAAGAAGATGAACTGGTCTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114199 34 - 179258 CTCCCAGCC-CGTCCAAGAAGATGAACTGGTCTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5589996 34 - 5823884 CTCCCAGCC-CGTCCAGGAAGATGTACTGGTCTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71113 34 + 372756 CTCCCAGCC-TATCCAAGAAGATGAACTGGTCTTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306692 34 + 16356641 CTCCCAGCC-TGTCCAAGAAGACAAACTGGTCTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175739 34 + 1231380 CTCCCAGCC-TGTCCAAGAAGATGAGCTGGTTGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707525 33 + 11732439 CTCCCAGCC-TGTCCAAGAAGATGAACT-GTCTTA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1883514 34 - 2029793 CTCCCAGCC-CATCCAGGAAGACGAACTGGGCTTA i proCoq1.NW_012150197v1 I 169 I 452 s otoGar3.GL873542 22871986 32 + 22939663 --CTCAGCC-CATCCAGGAGAGTGAACTGGTCTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814619 6 + 182113224 TTCTCA----------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47629524 35 + 47698779 CTCCTGGTCATGTCAGGGAAAATGAACCCGTCTTA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56888761 538 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=3260105.000000 s hg38.chr20_KI270870v1_alt 135567 330 + 183433 GGCT-----------GTGCTTCA--A------GTTATGGCTCAGATATGCTCTGAATGCCTTTAGTCCAGACCGG-ACCCTACAGAAGTCC-AAGCTGGGAGCCCTTCGTGTCCTT-GGCTGCAGTGGACCCTGTAGGCCTGTCCCAGTGCCCAGGTTTGGTGTCTGG----GTGTAAACCGATGCTGGAGCAGCAGTTGGCTGCTCTCCTCTCAGACTTCCTGGTCTCCCTCGGGGAGACGGGGGAGCAAAGCACTGAACCCCTGAGATGATCGCATCAGAC-CCCTGTTGCTGGCAGTCGGCAGCCGGGGTGAACATCGGCGATGCTCCTCTGCGGACAAGGG----AATGT-------------------------GGGTGGG s panTro5.chr20 66461658 330 + 66533130 GGCT-----------GTGCTTCA--A------GTTATGGCTCAGATATGCTCTGAATGCCTTTAGTCCAGCCCGG-ACCCTACAGAAGTCC-AAGCTGGGAGCCCTTCGTGTCCTT-GGCTGCAGTGGACCCTGTAGGCCTGTCCCAGTGCCCAGGTTTGGTGTCTGG----GTGTAAACCGATGCTGGAGCAGCAGTTGGCTGCTGTCCTCTCAGACTTCCTGGTCTCCCTCGGGGAGACGGGGGAGCAAAGCACTGAACCCCTGAGATGACTGCATCAGAC-CCCTGTTGCTGGCAGCCGGCAGCCGGGGTGAACATCGGCGATGCTCCTCTGTGGACAAGGG----AATGT-------------------------GGGTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62136706 330 + 62195757 GGCT-----------GTGCTTCA--A------GTTATGGCTCAGATATGCTCTGAATGCCTTTAGTCCAGCCCGG-ACCCTACAGAAGTCC-AAGCTGGGAGCCCTTCGTGTCCTT-GGCTGCAGTGGACCCTGTAGGCCTGTCCCAGTGCCCAGGTTTGGTGTCTGC----GTGTAAACCGATGCTGGAGCAGCAGTTGGCTGCTGTCCTCTCAGACTTCCTGGTCTCCCTCGGGGAGACGGGGGAGCAAAGCACTGAACCCCTGAGATGATTGCATCAGAC-CCCTGTTGCTGGCAGTCGGCAGCCGGGGTGAACATCGGCGATGCTCCTCTGTGGACAAGGG----AATGT-------------------------GGGTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 525778 330 - 578057 GGCT-----------GTGCTTCA--A------GTTATGGCTCAGATATGCTCTGAATGCCTTTAGTCCAGCCCGG-GCCCTACAGAAGTCC-AAGCTGGGGGCCCTTCGTGTCCTT-GGCTGCAGTGGACCCTGTAGGCCCGTCCCAGTGCCCGGGTTTGGTGTCTGG----GTGTAAACCGATGCTGGAGCAGCAGTTGGCTGCTCTCCTCTCAGACTTCCTGGTCTCCCTCGGGGAGACGGGGGAGCAAAGCACTGAACCCCTGAGGTGATCGCATCAGAC-CCCTGTTGCTGGCAGTCGGCAGCCGGGATGAACATCGGCGATGCTCCTCTGTGGACAAGGG----AATGT-------------------------GGGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048113 330 - 110113093 GGCT-----------CTGCTTCA--A------GTTATGACTCAGATATGCTCTGAATGCCTTTAGTCCAGCCTGG-ACCCTACAGAAGCCC-GAGCTGGGAGCCCTTCGTGTCCTC-GGCTGCAGTGGACCCTGTAGGCCTGTCCCAGTGCCCAGG-GAGGGGTCTGG----GTGTAAAGCGATGCTGGAGCAGCAGGTGGCTGCTCTCCTCTCATACTTCCTGGTCTCCCTCGGGGAGACGGAAGAGCAAAGTACTGAACCCCTGAGATGATCGAATCAGAC-CCCTGTTGCTGGCAGTAGGCAGCTGGGGTGAACATCGGTGATGTTCCTCTGTGGACAAGGG----AATGT------------------------GGGGGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92781904 342 - 92844088 GGATCTGGAGAACTCATGCTTGA--A------GTTATGGCTCAGATATGCTCTGAATGCCTTTAGCGCAGCCTAG-ACCCTACAGAAGTCC-AAGCTGGGAGCCCTTCGTGTCCTTGGGCTGCTGTGGACCCTGTAGGCCTGTCCCAGTGCCCAGGTTTGGTGTCTGG----GTGTAAACCGATGCTGGAGCAGCAGTTGGCTGCTGTCCTCTCAGACTTCCTGGTCTCCCTTGGGGAGACAGGGGAGCAAAGTACTGAAGCCCTGAGATGATCTCATCAGAC-CTCTGTTGCTGGCAGTAGGCAGCTGGGGTGAACATCAGTGATGTTCCTCTGTGGACAAGGG----AATGT-------------------------GAGTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96447959 342 + 96509753 GGATCTGGAGAACTCATGCTTGA--A------GTTATGGCTCAGATATGCTCTGAATGCCTTTAGCGCAGCCTAG-ACCCTACAGAAGTCC-AAGCTGGGAGCCCTTCGTGTCCTTGGGCTGCTGTGGACCCTGTAGGCCTGTCCCAGTGCCCAGGTTTGGTGTCTGG----GTGTAAACCGATGCTGGAGCAGCAGTTGGCTGCTGTCCTCTCAGACTTCCTGGTCTCCCTTGGGGAGACAGGGGAGCAAAGTACTGAAGCCCTGAGATGATCTCATCAGAC-CTCTGTTGCTGGCAGTAGGCAGCTGGGGTGAACATCAGTGATGTTCCTCTGTGGACAAGGG----AATGT-------------------------GAGTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16918920 342 - 16982598 GGATCTGGAGAACTCATGCTTGA--A------GTTATGGCTCAGATATGCTCTGAATGCCTTTAGCGCAGCCTAG-ACCCTACAGAAGTCC-AAGCTGGGAGCCCTTCGTGTCCTTGGGCTGCTGTGGACCCTGTAGGCCCGTCCCAGTGCCCAGGTTTGGTGTCTGG----GTGTAAACCGATGCTGGAGCAGCAGTTGGCTGCTGTCCTCTCAGACTTCCTGGTCTCCCTTGGGGAGACAGGGGAGCAAAGTACTGAAGCCCTGAGATGATCTCATCAGAC-CTCTGTTGCTGGCAGTAGGCAGCTGGGGTGAACATCAGTGATGTTCCTCTGGGGACAAGGG----AATGT-------------------------GAGTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3721698 342 - 3785965 GGATCTGGAGAACTCATGCTTGA--A------GTTATGGCTCAGATATGCTCTGAATGCCTTTAGTGCAGCCTAG-ACCCTACAGAAGTCC-AAGCTGGGAGCCCTTCGTGTCCTTGGGCTGCTGTGGACCCTGTAGGCCTGTCCCAGTGCCCAGGTTTGGTGTCTGG----GTGTAAACCGATGCTGGAGCAGCAGTTGGCTGCTGTCCTCTCAGACTTCCTGGTCTCCCTTGGGGAGACAGGGGAGCAAAGTACTGAAGCCCTGAGGTGATCTCATCAGAC-CTCTGTTGCTGGCAGTAGGCAGCTGGGGTGAACATCAGTGATGTTCCTCTGTGGACAAGGG----AATGT-------------------------GAGTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90299937 342 - 90373283 GGATCTGGAGAACTCATGCTTGA--A------GTTATGGCTCAGATATGCTCTGAATGCCTTTAGTGCAGCCTAG-ACCCTGCAGAAGTCC-AAGCTAGGAGCCCTTCGTGTCCTTGGGCTGCTGTGGACCCTGTAGGCCGGTCCCAGTGCCCAGGTTTGGTGTCTGG----GTGTAAACCGATGCTGGAGCAGCAGTTGGCTGCTGTCCTCTCAGACTTCCTGGTCTCCCTTGGGGAGACAGGGGAGCAAAGTACTGAAGCCCTGAGATGATCTCATCAGAC-CCCTGTTGCTAGCAGTAGGCAGCTGGGGTGAACATCAGTGATGTTCCTCTGTGGACAAGGG----AATGT-------------------------GAGTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114233 342 - 179258 GGATCTGGAGAACGCATGCTTGA--A------GTTATGACTCAGATATGCTCTGAATGCCTTTAGTGCAGCCCAG-ACCCTACAGAAGTCC-AAGCTGGGAGCCCTTTGTGTCCTTGGGCTGCTGTGGACCCTGTAGGCCTGTCCCAGTGCCCAGGTTTGGTGTCTGG----GTGTAAACCAATGCTGGAGCAGCAGTTGGCTGCTGTCCTCTCAGACTTCCTGGTCTCCCTTGGGGAGACAGGGGAGCAAAGTACTGAAGCCCTGAGATGATCTCATCAGAC-CTCTGTTGCTGGCAGTAGGCAGCTGGGGTGAACATCAGTGATGTTCCTCTGTGGACAAGGG----AATGT-------------------------GAGTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590030 342 - 5823884 GGATCTGGAGAactcatgcttga--a------gttatggctcagatgtgctctgaatgcctttagtgcagcctag-accctacagaagtcc-aagctgggagcccttcgtgtccttgggctgctgtggaccctgtAGGCCTGTCCCAGTGCCCAGGTTTGGTGTCTGG----GTGTAAACCAATGCTGGAGCAGCAGTTGGCTGCTGTCCTCTCAGACTTCCTGGTCTCCCTTGGGGAGACAGGGGAGAAAAGTACTGAACCCCCGAGATGATCTCTTCAGAC-CCCTGTTGCTGGCAGTAGGCAGCTGGGGTGAACATCAGTGATGTTCCTCTGTGGACAAGGG----AATGT-------------------------GAGTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71147 342 + 372756 GGATCTGGAGCTCTCATACTTAA--A------GTTATGGCTTAGATATGTTCTGAACGCCTCTAGTCCAGCCTAG-ACCCTACAGAAGTCT-GAGTTGGGAACCCATCGTGTCCTTTGGCTGCAGTGCACCCTGGAGGCCTGTCCCAGTGCCCGGCTTGGGTGTCTCA----GTGTAAACCCATCCTGGAGCAGCAGTTGGCTGCTCTCATCTCAGACTTCCTGGTCTCCCTTGGGGAGACTGGGGAGCAAAGTACTAAAACTCTGAGATGATCACATCAGACACCCTGTTGCTGGCAGCAGGCAGCTGGGGAGAACATGGGTGACATTCTTCTGTGGACAA-GA----AATGT-------------------------GGATGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16306726 342 + 16356641 GGATCTGGAGTGCTCATACTTAA--A------CTTATGGCTCAGATATGTTCTGAATGCCTTTAGTACAGCCTAG-ACCCTACAGAAGTGC-AAGTTGGGAGCCCATCGTGTCCTTCGGGGGCAGTGCGCCCTGTAGGCCTGTCCCAGTGCCCAGCTTGGGTGTCTCA----GTGTAAACCCATCCT-GAGCAGCAGTTGGCTGCTCGCATCTCAGACTTCCTGGTCTCCCTTGGGGAGACTGGGGAGCAAAGTACTAAAACCCTGAGATGATCACATCAGACACCCTGTTGCTGGCAGTGGGCAGCTGAGGAGAACAGGGGTGACATTCCTCTGTGGACAAGGA----AATGT-------------------------GGATGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1175773 340 + 1231380 GGATCTGGAGCGCTCATACTTAA--A------GTTATGGCTTAGATG---TTCGAGTGCCTTTAGTCCAGCCTAG-ACCCTACAGACATCC-AGGTTGGGAGCCCATCGTGTCCTTTGGCTGCAGTGCGCCCTGTAGGCCTGTCCCAGCGCCCAGCGTGGGTGTCTCA----GTGTAAACCCCTCCTGGAGCAGCAGTTTGCTGCTCTCATCTCAGACTTCCTGGTCTCCCTTGGGGAGACTGGGGAGCAAAGTACTAAAACCCTGAGATGATCACATCAGACACCCTGTTCCTGGCAGCGGGCAGCTGGGGAGAACATGGGTGGCATTCCTCTTTGGACAAGGA----AATGT-------------------------GGATGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707558 339 + 11732439 GGATCTGGAGCGCTCATACTTAA--A------GTTATGGCTCAGATATGTTCTGA-TGCCTTTAGTCCAGCCTAG-ACCCTACAGAAGTCC-AAGCTGGGAGCCCGTCGTGTCCTCTGGCTGCAGTGCACCCCATCGGCCCGTCCCAGTGCCCAGCTTGGGTGTCTCC----ATGTACACCCATCCTGGAGCAGCAGTTGGCTGCTCTCATCT-AGACTTCCTGGTCTCCC-TGGGGAGACTGGGGAG-AAGGTACTGAAACCCTGAGATCATCACATCAGACACCCCGTTGCTGGCAGCGGGCAGCTGGGGAGAACGTGGGTGACATTCCTCTGTGGATAAGGA----GATGT-------------------------GGATGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22872018 330 + 22939663 -GGTGTTACATTTGCCTTCCTGAGCA------CTTATGGCTTGGATGGGTTCTGGATGCTTCTAGTCCAGCCTAG--CCCTATAGAAGACT-GAGCTGGGAGCTCATCATTCCATCTGGATGCAGTGGACCCAG------------------CAGGTGTGGTATCTGG----GTGCCCAACAGGTATTAAGGAGCAGTTAGTCGGTCTCCTCTCAACCTCCCTGA-----CTCTGGAAACCAAGG--GCAAAGCGCTGCAGCCCTGTGTCCACCCTGTCAGAC--------ACTTGCCAGGGGCAAGGGAGGCCAGCTTTGGTG-TGCTCCTATGTGGA----GG----AGTGCTAAAGACCCCAGTCTGGGCACGGTGGGGTAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814625 315 + 182113224 ----------------TGATTGA--A------CATAAGACTTAAATATGTTCTAGATAATCATA-TATGACTGCA-ACTTAATAAAAGGCT-AAGCCAGAAACACACACTCTCCTTTGGATACAGTGAACACAGCAGGCTGAATCCAGTGCTCTATTTT--TTTTTGGTCCCGTGTAAAGCTAGGCT-------CATTCACCTACTCTTTTTATTGGTTTTCTGGGTTTCCCTGGGAGGGCAGGGGTTCA--GTCCTGAGTCCCTGATATAATCCTATTAAAT-ACCTGTTGCTGGCAATGACAGACTAAAGT-------AGTGATGCTCCTTTGTAAAGAGGTGCTTAAAGGG-------------------------GGACGGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47629559 252 + 47698779 -GGTGTTAGGCTTGCCTTTCTGA--ATGCTGTTTAAAGGCCCATATGTGTTCTGGAACCTTCTAGTCCAGTCTAGAACCTTGTAGAAGGCCAAAAATGGGAGCCCATCATTCC-------TGCACTGGA--------------------------------------G----ATG---------------------------TGCTCTTGTCTT-GGCTTCTTGGAC-CCTGTAGAGAGACCGGGTGGCAGAGTTCTGAAGGCCCAGTGTCATGGAAGCAGGC------TGACCAGACGTGCACGCCTTTGA--GAGATCAGTGCTA----------------GG----GGGGC-------------------------CGGTGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1883548 452 - 2029793 I e micMur3.chr18 56888761 538 + 57149010 I e dasNov3.JH569290 266932 1914 - 397369 I a score=355385.000000 s hg38.chr20_KI270870v1_alt 135897 35 + 183433 CGCACTCAAGGGCTGAGCCCAGAAGGCTTTCCTCT s panTro5.chr20 66461988 35 + 66533130 CGCACTCAAGGGCTGAGCCCAGAAGGCTTTCCTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137036 35 + 62195757 CGCACTCAAGGGCTGAGCCCAGAAGGCTTTCCTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526108 35 - 578057 CGCCCTCAAGGGCTGAGCCCAGAAGGCTTTCCTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048443 35 - 110113093 CCCACTCAAGGGCTGAGCCCGGAAGGCTTTCCTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782246 35 - 92844088 CTCACTCAAGGGCTGTGCCCGGAAGGCTTTCCTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448301 35 + 96509753 CTCACTCAAGGGCTGTGCCCGGAAGGCTTTCCTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919262 35 - 16982598 CTCACTCAAGGGCTGCGCCCGGAAGGCTTTCCTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722040 35 - 3785965 CTCACTCAAGGGCTGTGCCCGGAAGGCTTTCCTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300279 35 - 90373283 CTCACTCAAGGGCTGCGCCCGGAAGGCTTTCCTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114575 35 - 179258 CTCACTCCAGGGCTGCGCCCGGAAGGCTTTCCTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590372 35 - 5823884 CTCACTCAAGGGCTGCGCCCGGAAGGCTTTCCTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71489 35 + 372756 CCCACTCAAGGGCTGAGCCCAGAAGGCTTTCCTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307068 35 + 16356641 CCCACTCAAGGGCTGAGCCCAGAAGGCTTTCCTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176113 35 + 1231380 CCCACTCAAGGGCTGAGCCCAGAAGGCTTTCCTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707897 34 + 11732439 -CCACTCAAGGGCTGAGCCCAGAAGGCTTTCCTCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22872348 31 + 22939663 TACACTTGAGGAC-ATGCCCAGGTCATCTTCC--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814940 30 + 182113224 ATGTTTGAGGGACCTAGAGCTTAAGATTTT----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47629811 26 + 47698779 CCCGCATGGGGGCTGGGCACAGAGGG--------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 268846 33 - 397369 CACGCTAGAGGGCAGTGGGTGGAGGACTCCGCG-- i dasNov3.JH569290 I 1914 C 0 e proCoq1.NW_012150197v1 1883548 452 - 2029793 I e micMur3.chr18 56888761 538 + 57149010 I a score=537616.000000 s hg38.chr20_KI270870v1_alt 135932 51 + 183433 GGGGGTCCCA---GGGCTC----TGGGCC---GGGGCTAAACGCCTTCACGGGCTCCCGTT s panTro5.chr20 66462023 51 + 66533130 GGGGGTCCCA---GGGCTC----TGGGCC---GGGGCTAAACGCCTTCACGGGCTCCGGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137071 51 + 62195757 GGGGGTCCCA---GGGCTC----TGGGCC---GGGGCTAAACGCCTTCACGGGCTCCGGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526143 51 - 578057 GGGGGTCCCA---GGGCTC----TGGGCC---GGGGCTAAACGCCTTCATGGGCTCCGGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048478 51 - 110113093 GGGGGTCCCA---GGGCCC----TGGGCC---GGGGCTAAACATCTTCATGGGCTCTGGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782281 48 - 92844088 GGGAGTCCCA---GGGCTC----TGGGCC---GGTTCCA---GTCTTCCCGGGCTCTGGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448336 48 + 96509753 GGGAGTCCCA---GGGCTC----TGGGCC---GGTTCCA---GTCTTCCCGGGCTCTGGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919297 48 - 16982598 GGGAGTCCCA---GGGCTC----TGGGCC---GGTTCCA---GTCTTCCCGGGCTCTGGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722075 48 - 3785965 GGGAGTCCCA---GGGCTC----TGGGCC---GGTTCCA---GTCTTCCCGGGCTCTGGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300314 48 - 90373283 GGGAGTCCCA---GGGCTC----TGGGCC---AGTTCCA---GTCTTCCCGGGCTCTGGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114610 48 - 179258 GGGAGTCCCA---GGGCTC----TGGGCC---GGTTCCA---GTCTTCCCGGGCTCTGGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590407 51 - 5823884 GGGAGTCCCA---GGGCTC----TGGGCC---GGGGCTAAACGTCTTCACGGGCTCTGGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71524 51 + 372756 GGGGGTCCCA---GGGCTC----TGGGCT---GGGGCTAAACATCTTCATGGGCTCTGGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307103 51 + 16356641 GGGGGTCGCA---GGGCTC----TGGGCC---GGGGCTAAACAGCTTCATGGGCTCTGGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176148 51 + 1231380 GGGGGTCCCA---GGGCTC----TGGGCC---AGGGCTAAACATCTTCATGGGCTCTGGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707931 51 + 11732439 GGGGGTCCCA---GGGCTC----GGGGCC---AGGGCTCAACATCTTCACGGGCTCTGGTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56889299 51 + 57149010 GGGGGTCGCA---GGTCTC----TGGACC---GAGGATGGATGCCTTCACAGGCTCTGGTC i micMur3.chr18 I 538 C 0 s otoGar3.GL873542 22872379 51 + 22939663 GGGGGTCCCA---GGTCTC----TGGACC---GAGGCTAGGCTTCTTTATGAGCTCTGGTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181814970 57 + 182113224 GATGGACTCAGTTGAGAGC----TGAGCCCAAAGGGGCATATGTCTTTATCAGCTCTTGTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47629837 35 + 47698779 ---------------GCTC--------CT---GTGGTCAAGTGTCTTCACTGGCTCTGGTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 268879 41 - 397369 GGCAGTGC-----GGGCTCCTGGTGGGCC---TGTGCTT------------GGGCCCGGCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1883548 452 - 2029793 I a score=2043287.000000 s hg38.chr20_KI270870v1_alt 135983 117 + 183433 CCAGTTCTGCTTCCCTCTGCAGGTGCCCCACGCCCGGCTGTGACGGCTCTGGCCACATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCACACCCTCAGGTCCTGGGCCC s panTro5.chr20 66462074 117 + 66533130 CCAGTTCTGCTTCCCTCTGCAGGTGCCCCACGCCCGGCTGTGACGGCTCTGGCCACATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCACGCCCTCAGGTCCTGGGCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137122 117 + 62195757 CCAGTTCTGCTTCCCTCTGCAGGTGCCCCACGCCCGGCTGTGACGGCTCTGGCCACATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCACGCCCTCAGGTCCTGGGCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526194 117 - 578057 CCAGTTCTGCTTCCCTCTGCAGGTGCCCCACGCCCGGCTGTGACGGCTCTGGCCACATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCACGCCCTCAGGTCCTGGGCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048529 117 - 110113093 CCAGTTCTGTTTCCCTCTGCAGGTGCCCCACCCCTGGCTGTGACGGCTCCGGCCACATCACAGGGAACTACGCTTCGCACCGGAGGTGAGCCTGCCACACCCTCAGGTCCTGGGCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782329 117 - 92844088 CCAGTTGTGCTTTCCTCTGCAGGTGCCCCACGCCTGGCTGCGACGGCTCTGGCCATATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCGTGCCCTCAGGTCCTGGGCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448384 117 + 96509753 CCAGTTGTGCTTTCCTCTGCAGGTGCCCCACGCCTGGCTGCGACGGCTCTGGCCATATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCGTGCCCTCAGGTCCTGGGCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919345 117 - 16982598 CCAGTTGTGCTTTCCTCTGCAGGTGCCCCACGCCTGGCTGCGACGGCTCTGGCCATATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCGTGCCCTCAGGTCCTGGGCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722123 117 - 3785965 CCAGTTCTGCTTTCCTCTGCAGGTGCCCCACGCCCGGCTGTGACGGCTCTGGCCATATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCTGTGCCCTCAGGTCCTGGGCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300362 117 - 90373283 CCAGTTCTGCTTTCCTCTGCAGGTGCCCCACGCCTGGCTGTGACGGCTCTGGCCATATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTCCCGTGCCCTCAGGTCCTGGGCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114658 117 - 179258 CCAGTTCTGCTTTCCTCTGCAGGTGCCCCACGCCCGGCTGTGACGGCTCTGGCCATATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCGTGCCCTCAGGTCCTGGGCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590458 117 - 5823884 CCAGTTCTGCTTTCCTCTGCAGGTGTCCCACGCCTGGCTGTGACGGCTCTGGCCATATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCACGCCCTCAAGTCCTGGGCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71575 117 + 372756 CCAGTTCTGCATTCTTCTGCAGGTGCCCCACGCCTGGCTGTGATGGCTCTGGCCACATTACAGGGAACTATGCTTCACACCGGAGGTGAGCCTGCCATACCCTCAGGTCCTGGGCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307154 116 + 16356641 CCAGTTCTGCGTTCTTCTGCAGGTGCCCCACGCCTGGCTGTGACGGCTCTGGCCATATCACAGGGAACTACGCTTCACACCGGAGGTAAGCCTGCCACACCCTCAGGTCCT-GGCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176199 117 + 1231380 CCAGTTCTACATTCTTCTGCAGGTGCCCCACGCCTGGCTGTGACGGCTCTGGCCATATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCACACCCTCAGGTCCTGGGCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2707982 117 + 11732439 CCAGCTCTGCATTCTTCTGCAGGTGCCCCACGCCCGGCTGTGACGGCTCCGGCCACATCACAGGGAACTACGCTTCACACCGGAGGTGAGCCTGCCACACCCTCAGGTCCTGGGCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56889350 117 + 57149010 CCAGCTCTGCTTTCCTCCGCAGGTGCCCCACGCCCGGCTGCGATGGCTCCGGCCACATCACAGGGAACTACGCCTCTCACCGGAGGTGAGCCTGCCACACCCTTGGGTCCTGGGCCC i micMur3.chr18 C 0 I 51 s proCoq1.NW_012150197v1 1884000 117 - 2029793 CCAGTTCTGCTTTCCTCTGCAGGTGCCCCACGCCCGGCTGCGACGGCTCTGGCCACATAACAGGGAACTACGCTTCTCACCGGAGGTGAGCCTGCCACACCCTTGGGTCCTGGGCCC i proCoq1.NW_012150197v1 I 452 C 0 s otoGar3.GL873542 22872430 99 + 22939663 TCAGCTCTGCTTTCCTTCACAGGTGCCCCACACCTGGCTGTGATGGCTCTGGCCACATAACAGGGAACTATGCTTCTCATCGGAGGTGAG------------------CCTGGGCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181815027 95 + 182113224 -TCATCCTATGTTCCTCTGCAGGTGCCCCACACCTGGCTGTGATGGCTCTGGCCACATAACAGGGAACTATGCTTCACACCGGAGGTAAG--------------------TGGGGA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47629872 117 + 47698779 CCAGCTCCACTGTCTTCCACAGGTGCCCCACGCCCGGCTGTGACGGCTCTGGCCATATAACGGGGAACTACGCCTCCCACAGAAGGTGAGCCTGCGGCACCCCGAGGTGCCCGGCCG i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 268920 98 - 397369 CCAGGCTCGC-TTCCTCCGCAGGTGCCCCACGCCTGGCTGCGACGGCTCTGGACACATCACTGGGAACTACGCGTCGCATCGGAGGTAAG------------------CCCGGGCCC i dasNov3.JH569290 C 0 C 0 a score=360834.000000 s hg38.chr20_KI270870v1_alt 136100 28 + 183433 CAGGGGTGGGCAG------GGAGTCTCTTCCTTA s panTro5.chr20 66462191 28 + 66533130 CAGGGGTGGGCAG------GGAGTCTCTTCCTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137239 28 + 62195757 CAGGGGTGGGCAG------GGAGTCTCTTCCTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526311 28 - 578057 CAGGGGTGGGCAG------GGAGTCTCCTCCTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048646 28 - 110113093 CAGGGGTGGGCAG------GGAATCTCTTCCTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782446 28 - 92844088 CAGGGGTGGGTAG------GGAATCTTTTCCTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448501 28 + 96509753 CAGGGGTGGGTAG------GGAATCTTTTCCTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919462 28 - 16982598 CAGGGGTGGGTAG------GGAATCTCTTCCTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722240 28 - 3785965 CAGGGGTGGGTAG------GGAATCTCTTCCTTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300479 28 - 90373283 CAGGGGTGGGTAG------GGAATCTCTTCCTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114775 28 - 179258 CAGGGGTGGGTAG------GGAATCTCTTCCTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590575 28 - 5823884 CAGGGGTGGGTAG------AGAATCTCTTCCTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71692 28 + 372756 CAGGGGTGGGTAG------GGAATCTTTTCCTTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307270 28 + 16356641 CAGGGGTGGGTAG------GGAATCTTTTCCTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176316 28 + 1231380 CAGGGGTGGGTAG------GGAATCTTTTCCTTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708099 28 + 11732439 CAGGGCTGGGTAG------GGAATCTTTTCCTTA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1884117 27 - 2029793 TGGAGGTGGG-TG------GGAATCTCTTCCCTA i proCoq1.NW_012150197v1 C 0 I 21 s otoGar3.GL873542 22872529 26 + 22939663 TTGAGGTGGG-AG------GGAG-CTCTTCCTTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181815122 28 + 182113224 TAAGGATAGTGGT------GAAAGGTCTGACTTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47629991 25 + 47698779 CGGGGGAGGGCGG------G---CCTCTTGCGCA i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 269018 32 - 397369 --GGGGTGGGCGGCCAGCTAGGGGCTCCTCCTTA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56889467 51 + 57149010 I a score=96392.000000 s hg38.chr20_KI270870v1_alt 136128 10 + 183433 TATGAAGATT s panTro5.chr20 66462219 10 + 66533130 TATGAAGATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137267 10 + 62195757 TATGAAGATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526339 10 - 578057 GAAGAAGATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048674 10 - 110113093 TTTGAAGATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782474 10 - 92844088 GATGAAGATC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448529 10 + 96509753 GATGAAGATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919490 10 - 16982598 GATGAAGATC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722268 10 - 3785965 GATGAAGATC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300507 10 - 90373283 GATGAAGATC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114803 10 - 179258 GATGAAGATC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590603 10 - 5823884 GATGAAGATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71720 10 + 372756 GATGAAGATT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307298 10 + 16356641 GATGAAGATA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176344 10 + 1231380 GATGAAGATT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708127 10 + 11732439 GATGAAGATT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22872555 7 + 22939663 GACAAAG--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181815150 10 + 182113224 GACAAAGTTC i mm10.chr2 C 0 I 11 s canFam3.chr24 47630016 10 + 47698779 GATGAAGCTG i canFam3.chr24 C 0 I 1 e proCoq1.NW_012150197v1 1884144 21 - 2029793 I e micMur3.chr18 56889467 51 + 57149010 I e dasNov3.JH569290 269050 0 - 397369 C a score=21075.000000 s hg38.chr20_KI270870v1_alt 136138 3 + 183433 AGA s panTro5.chr20 66462229 3 + 66533130 AGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137277 3 + 62195757 AGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526349 3 - 578057 AGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048684 3 - 110113093 GGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782484 3 - 92844088 GGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448539 3 + 96509753 GGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919500 3 - 16982598 GGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722278 3 - 3785965 GGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300517 3 - 90373283 GGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114813 3 - 179258 GGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590613 3 - 5823884 GGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71730 3 + 372756 AGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307308 3 + 16356641 AGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176354 3 + 1231380 AGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708137 3 + 11732439 AGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1884165 3 - 2029793 ATA i proCoq1.NW_012150197v1 I 21 C 0 s mm10.chr2 181815171 3 + 182113224 ATA i mm10.chr2 I 11 C 0 s canFam3.chr24 47630027 2 + 47698779 AG- i canFam3.chr24 I 1 I 11 e micMur3.chr18 56889467 51 + 57149010 I e dasNov3.JH569290 269050 0 - 397369 C e otoGar3.GL873542 22872562 0 + 22939663 C a score=570111.000000 s hg38.chr20_KI270870v1_alt 136141 44 + 183433 AGACACTAATGTTGCTGACAGCTAGAGTCCATTCCCATCTCTTT s panTro5.chr20 66462232 44 + 66533130 AGACACTAATGTTGCTGACAGCTAGAGTCCATTCCCATCTCTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137280 44 + 62195757 AGACACTAATGTTGCTGACAGCTAGAGTCCATTCCCATCTCTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526352 44 - 578057 AGACACTGATGTTGCTGACTGCTAGAGTCCATTTCCATCTCTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048687 44 - 110113093 AGACACTAATGTTGCTGACAGCCAGAGTCCATTTCCATCTCTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782487 44 - 92844088 AGACACTAATGTTGCTGACCGCTGGAGTCCATTTCCATCTCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448542 44 + 96509753 AGACACTAATGTTGCTGACCGCTGGAGTCCATTTCCATCTCTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919503 44 - 16982598 AGACACTAATGTTGCTGACCGCTGGAGTCCATTTCCATCTCTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722281 44 - 3785965 AGACACTAATGTTGCTGACCGCTGGAGTCCATTTCCATCTCTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300520 44 - 90373283 AGACACTAATGTTGCTGACCACTGGAGTCCATTTCCATCTCTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114816 26 - 179258 A------------------CGCTGGAGTCCATTTCCATCTCTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590616 44 - 5823884 AGACACTAATGTTGCTGACCGCTGGAGTCCATTTCCATCTCTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71733 44 + 372756 AGACATTAATGTTGCTGACAGCTAGAGTCCATTTTCATCTCTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307311 44 + 16356641 AGACATTAATGTTGCTGACAGCTAGAGTCCATTTTCATCTCTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176357 44 + 1231380 AGACACTAATGTTGCTGAGAGCTAGAGTCCATTTTCATCTCTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708140 44 + 11732439 AGACATTAATGTTGCTGACAGCTAGAGTCCATTTTCGTCTCTTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56889518 44 + 57149010 AGACACTGATGTTGCTGACAGCTAGAGCTCACTCCCATCTCTTT i micMur3.chr18 I 51 I 181 s proCoq1.NW_012150197v1 1884168 44 - 2029793 AGACGTTGATGTTGCTGACAGCTAGAGCTCATTTCCATCTCTTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22872562 7 + 22939663 ---------------------TTATAGT---------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181815174 44 + 182113224 AGGTATTAAAGTTACCAACACCTAGAGCCCATTTATATCTCTTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47630040 42 + 47698779 AGACATTGATGTTG-GGGCAGCTAGAG-CCTCTTTCATGTCTAT i canFam3.chr24 I 11 C 0 s dasNov3.JH569290 269050 26 - 397369 ----------------GACAGCTAGGGCCCATTT--GTCTCTTC i dasNov3.JH569290 C 0 C 0 a score=693857.000000 s hg38.chr20_KI270870v1_alt 136185 58 + 183433 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAAGTTGTC-----------CTCTGCAGTAAGATAAA s panTro5.chr20 66462276 58 + 66533130 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAAGTTGTC-----------CTCTGCAGTAAGATAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137324 58 + 62195757 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAAGTTGTC-----------CTCTGCAGTAAGATAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526396 58 - 578057 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAAGTTGTC-----------CTCTGCAGTAAGATAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048731 58 - 110113093 AATCTGAATTGTTGCCATTTCCAG--AACCTCACTATGTTGCC-----------CTCTGCAGTAAGATAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782531 58 - 92844088 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAGATTGCC-----------CTCTGCAGTAAGATAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448586 58 + 96509753 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAGATTGCC-----------CTCTGCAGTAAGATAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919547 58 - 16982598 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAGATTGCC-----------CTCTGCAGTAAGATAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722325 58 - 3785965 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAGATTGCC-----------CTCTGCAGTAAGATAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300564 69 - 90373283 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAGATTGCCAGAACCTGATTATCTGCAGTAAGATAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114842 58 - 179258 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAGATTGCC-----------CTCTGCAGTAAGATAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590660 57 - 5823884 AATCTGAATTGTTGCCATTTCCAG--AACCTGATTAGGTTGCC-----------CTCTGCAGTAAGAT-AA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71777 58 + 372756 AATCTGAATTGTTGCTGCTTCCAG--AACCTGATTAGATTGTC-----------CTCTGCAGTAAGATACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307355 58 + 16356641 AATCTGAATTGTTGCTGTTTCCAG--AACCTGATTAGATTGTC-----------CTCCGCAGTAAGATAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176401 57 + 1231380 AATCTGAATTGTTGCTGTTTCCAG---ACCTGATTAGATTGTC-----------CTCTGCAGTAAGATAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708184 58 + 11732439 AATCTGAATCGTTGCTGTTTCCAG--AACCTGATTAGATTGTC-----------CTCCGCAGAAAGATAAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1884212 60 - 2029793 AGTCTGAATTGTTGCTGCTCCCAGAGAACCTGATTAGGTTGCC-----------CTGTGCAGTAAGATAAA i proCoq1.NW_012150197v1 C 0 I 114 s mm10.chr2 181815218 52 + 182113224 ----TGAATTGTTGGTGCTTCCAG--CA-TTGCTCAGTTATCC-----------CTTTGCAGTAAATCAA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47630082 46 + 47698779 AATCTGA----TTGGTGTCCCCGA--TGCCCGATCAGGTCGCC-----------TTCTGCAGC-------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 269076 47 - 397369 CATCTGAAGTGTCGACATTTCCAG--AATCTG--CAGGTTGCT-----------CTCGGGAG--------- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56889562 181 + 57149010 I e otoGar3.GL873542 22872569 0 + 22939663 C a score=325500.000000 s hg38.chr20_KI270870v1_alt 136243 38 + 183433 AAGACAAGGGG--TCAGGGCTAGGGGCTCGTGGTAATGCT--------- s panTro5.chr20 66462334 38 + 66533130 AAGACAAGGGG--TCAGGGCTAGGGGCTTGTGGTAATGCT--------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137382 38 + 62195757 AAGACAAGGGG--TCAGGGCTAGGGGCTCGTGGTAATGCT--------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526454 38 - 578057 AAGACAAGGGG--TCAGGGCTAGGGGCTCGTGGTAATGCT--------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048789 38 - 110113093 AAGGCAAAGGG--TCAGGGTTAGGGGCTCATGGTAATGCT--------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782589 38 - 92844088 AAGACAAAGTG--TCAGGGTTAGGGGCTCACGGAAATGCT--------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448644 38 + 96509753 AAGACAAAGTG--TCAGGGTTAGGGACTCATGGAAATGCT--------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919605 38 - 16982598 AAGACAAAGTG--TCAGGGGTAGGGGCTCGTGGAAATGCT--------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722383 38 - 3785965 AAGACAAAGTG--TCAGGGTTAGGGGCTCATGGAAATGCT--------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300633 38 - 90373283 AAGACAAAGTG--TCAGGGTTAGGGGCTCATGGAAATGCT--------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 114900 38 - 179258 AAGACAAAGTG--TCAGGGTTAGGGGCTCATGGAAATGCT--------- i manLeu1.NW_012101652v1 C 0 I 311 s colAng1.NW_012114444v1 5590717 38 - 5823884 AAGACAAAGCG--TCAGGGTTAGGGGCTCATGGAAATGCT--------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71835 38 + 372756 ATGACAAAGGG--TGAGGGTTAGGAGCTCATGGCAATGCT--------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307413 40 + 16356641 ATGACAAAGGAGCTCATGGTAAGGAGCTCATGGTAATGCT--------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176458 38 + 1231380 ATGACAAAGGG--TGAGGGTTAGGAGCTCATGGTAATGCT--------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708242 25 + 11732439 ATGACAAAGGG--TGAGGGTTAGGAGC---------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22872569 13 + 22939663 ----------G--TTAGGGCTAGGG------------------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181815270 37 + 182113224 AAGACAAAGTG--TCA-GCTTAGAGGCTCCTGAAGAGGTT--------- i mm10.chr2 C 0 I 1 s canFam3.chr24 47630128 26 + 47698779 --------------CAGAACCAGGGGCTCATGGCAACACC--------- i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 269123 41 - 397369 --GATTTGGAG--CCAGGGTCAGGTGCGTGTG----TGTTGGCAGCCCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1884272 114 - 2029793 I e micMur3.chr18 56889562 181 + 57149010 I a score=14491.000000 s hg38.chr20_KI270870v1_alt 136281 10 + 183433 ----TCTCCTTCCC s panTro5.chr20 66462372 10 + 66533130 ----TCTCCTTCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137420 10 + 62195757 ----TCTCCTTCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526492 10 - 578057 ----TCTCCTTCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048827 10 - 110113093 ----TCTCCTTCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782627 9 - 92844088 ----TCTCCTTCC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448682 9 + 96509753 ----TCTCCTTCT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919643 9 - 16982598 ----TCTCCTTCT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722421 9 - 3785965 ----GCTTCTTCT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300671 9 - 90373283 ----TCTCCTTCT- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5590755 9 - 5823884 ----TCTCCTTCT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71873 10 + 372756 ----TCTCATTTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307453 10 + 16356641 ----TCTCCTTCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176496 10 + 1231380 ----TCCCATTCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708267 2 + 11732439 ------------CC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181815308 9 + 182113224 ----CCCACTTTT- i mm10.chr2 I 1 I 3 s canFam3.chr24 47630156 7 + 47698779 ----CCCCCGA--- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 269164 14 - 397369 CCGCGCGCCTGACC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1884272 114 - 2029793 I e micMur3.chr18 56889562 181 + 57149010 I e manLeu1.NW_012101652v1 114938 311 - 179258 I e otoGar3.GL873542 22872582 0 + 22939663 C a score=467390.000000 s hg38.chr20_KI270870v1_alt 136291 74 + 183433 GACCCTGCTGCC-TCGTGTGAAGGCT--GTGTC----------TGTGGATTCTGCTTCTT-ACAA--------CTGACCCATCGGTTG--------------CCCT---CACT s panTro5.chr20 66462382 74 + 66533130 GACCCTGCTGCC-TCGTGTGAAGGCT--GTGTC----------TGTGGATTCTCCTTCTT-ACAA--------CTGACCCATCGGTTG--------------CCCT---CACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137430 74 + 62195757 GACCCTGCTGCC-TCGTGTGAAGGCT--GTGTC----------TGTGGATTCTCCTTCTT-ACAA--------CTGACCCATCGGTTG--------------CCCT---CACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526502 74 - 578057 GACCCTGCTGCC-TCGTGTGAAGGCT--GTGTC----------TGTGGATTCTGCTTCTT-ATAA--------CTGACCCATCGGTTG--------------CCCT---CACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048837 62 - 110113093 GACCCTGCTGC-------------CT--ATGTC----------TGTGGATTCTGCTTCTT-ACAA--------TTGATCCGTCGACTG--------------CTCT---CACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782636 71 - 92844088 GACCCTGCTGCC-TCGTGCGAAG-----GTGTC----------TGTGGATTCTGCTTCTT-ACAA--------TGGACCCATCAGTTG--------------CCCT---CACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448691 71 + 96509753 GACCCTGCTGCC-TCGTGCGAAG-----GTGTC----------TGTGGATTCTGCTTCTT-ACAA--------TGGACCCATCAGTTG--------------CCCT---CACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919652 70 - 16982598 GACCCTGCTGCC-TCGTGCGAAG-----GTGTC----------TGTGGATTCTG-TTCTT-ACGA--------TGGACCCATCAGTTG--------------CCCT---CACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722430 76 - 3785965 GACCCTGCTGCC-TCGTGCGAAGGCTCCGTGTC----------TGTGGATTCTGCTTCTT-ACAA--------TGGATCCATCAGTTG--------------CCCT---CACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300680 76 - 90373283 GACCCTGCTGCC-TCGTGCGAAGGCTCCGTGTC----------TGTGGATTCTGCTTCTT-ACAA--------TGGATCCATCAGTTG--------------CCCT---CACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115249 76 - 179258 GACCCTGCTGCC-TCGTGCGAAGGCTCCGTGTC----------TGTGGATTCTGCTTCTT-ACAA--------TGGATCCATCAGTTG--------------CCCT---CACT i manLeu1.NW_012101652v1 I 311 C 0 s colAng1.NW_012114444v1 5590764 76 - 5823884 GACCCTGCTGCC-TCGTGCGAAGGCTCCATGTC----------TGTGGTTTCTGCTTCTT-ACAA--------CGGATCCATCAGTTG--------------CCCT---CATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71883 76 + 372756 GATCCTTCTGCC-TTGTGTGAAGGCTTTGTGTC----------TGTGGATTCTGCTTCTT-ACAA--------CTGATCCATCAGTTG--------------TCCC---CACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307463 74 + 16356641 GATCCTTCTGCC-TTGTGTGAAGGCTTTGTGCC----------TGTGGATTCTGCTCCTT-ACAA--------TTGATCTGTCAGTGG--------------CCCT---CA-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176506 74 + 1231380 GATCCTTCTCCC-TTGTGTGAAGGCTTTGTGTC------------TGGATTCTGCTTCTT-ACAG--------TTGATCCGTCAGTGG--------------CCCT---CACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708269 63 + 11732439 CGTCCTTCTGCC-TTGTGTGAAGGCTTCGTGTC----------TGTGGATTCTGTCTCT----------------------TCAGTCG--------------TCCC---CTCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22872582 25 + 22939663 -------------------------------------------------------TTAGT-TCAG--------TTGATC-------TG--------------CCTT---CACT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181815320 98 + 182113224 TGTTCTGTTGCC-CTGCTTGAAGGCTCTGTAAG----------AGTCAAGTCTATTCCAC-ACAAAAGCATACCTAATGAGTCAGCTGACTGATTGATCCTTTCTT---CCCT i mm10.chr2 I 3 C 0 s canFam3.chr24 47630163 58 + 47698779 GGCCCCTCTGCC-CCC--------------------------------ACTCTGCTCGACGACAG--------AAGCTCCTTGGGACG--------------CCCTGGGCGCT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 269178 71 - 397369 GGCCATCCTGCCAGCGGCCAGAGGCCGTCAGCCACAGGCCCACCGCGGCCTCTGCTTGGC-------------CTGGCCCGTAG----------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1884272 114 - 2029793 I e micMur3.chr18 56889562 181 + 57149010 I a score=122264.000000 s hg38.chr20_KI270870v1_alt 136365 14 + 183433 CCCTCCCACCCCA-C s panTro5.chr20 66462456 14 + 66533130 CCCTCCCACCCCA-C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137504 14 + 62195757 CCCTCCCACTCCA-C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526576 14 - 578057 CCCTCCCACCCCA-C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048899 14 - 110113093 CTCTCCCACCCCA-G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782707 14 - 92844088 CTCTCCCACCCCA-A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448762 14 + 96509753 CTCTCCCACCCCA-A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919722 14 - 16982598 CTCTCCCACCCCA-A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722506 14 - 3785965 CTCTCCCACCCCA-A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300756 14 - 90373283 CTCTCCCACCCCA-A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115325 14 - 179258 CTCTCCCACCCCA-A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590840 14 - 5823884 CTCTCCCACCCCA-A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71959 14 + 372756 CCCTCTCACCCCC-A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307537 14 + 16356641 CCCCCTCGCCCCC-A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176580 14 + 1231380 CCCTCTCACCCCC-A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708332 14 + 11732439 CCCTCTCACCCCG-A i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1884386 14 - 2029793 CCCTCCCACCCAAC- i proCoq1.NW_012150197v1 I 114 C 0 s otoGar3.GL873542 22872607 13 + 22939663 CCCTCCCTCCTGC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181815418 14 + 182113224 CCTTCCCACCCCC-A i mm10.chr2 C 0 C 0 s canFam3.chr24 47630222 2 + 47698779 CT------------- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 269249 12 - 397369 --CCCCCGCCCGG-G i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56889562 181 + 57149010 I a score=3393189.000000 s hg38.chr20_KI270870v1_alt 136379 203 + 183433 CCTGGGGTCACAGAGCTTGAGGGGAGAGGGTGAGATGAAC---GGGTGTGAGAAGC--TGCGGTTCCAGCACTAAGGTGGCCTTTTTTCCTCTTTCGAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC s panTro5.chr20 66462470 203 + 66533130 CCTGGGGTCACAGAGCTTGAGGGGAGAGGGTGAGACGAAC---GGGTGTGAGAAGC--TGCGGTTCCAGCACTAAGGTGGCCTTTTTTCCTCTTTCGAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137518 203 + 62195757 CCTTGGGTCACAGAGCTTGAGGGGAGAGGGTGAGATGAAC---GGGTGTGAGAAGC--TGCGGTTCCAGCACTAAGGTGGCCTTTTTTCCTCTTTCGAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526590 203 - 578057 CCTGGGGTCACAGAGCTTGAGGGGAGAGGGTGAGATGAAC---GGGTGTGAGAAGC--TGCGGTTCCAGCACTAAGGTGGCCTTTTTTCCTCTTTCGAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110048913 203 - 110113093 CCTGGGGTCACAGAGCTTGAGGGGAGAGGATGAGATGAAC---GGGTGTGAGAAGC--TGCAGTTCTGGCACTAAGGTGGCCTTTTTTCCTCTTTCAAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGATGACAAGGAGGACCCTGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782721 203 - 92844088 CCTGGGGTCACAGAGCGTGAGGGGCGAGGATGAGATGAAC---GGGTGTGAGAAGC--CGCTGTTCTAGCACTAAGGTGGCCTTTTTTCCTCTTTCAAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448776 203 + 96509753 CCTGGGGTCACAGAGCGTGAGGGGCGAGGATGAGATGAAC---GGGTGTGAGAAGC--CGCTGTTCTAGCACTAAGGTGGCCTTTTTTCCTCTTTCAAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919736 203 - 16982598 CCTGGGGTCACAGAGCGTGAGGGGCGAGGATGAGATGAAC---GGGTGTGAGAAGC--CGCTGTTCTAGCACTAAGGTGGCCTTTTTTCCTCTTTCAAAACCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722520 203 - 3785965 CCTGGGGTCACAGAGCGTGAGGGGCGAGGATGAGATGAAC---GGGTGTGAGAAGC--CGCTGTTCTAGCACTAAGGTGGCCTTTTTTCCTCTTTCAAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300770 203 - 90373283 CCTAGGGTCACAGAGCGTGAGGGGCGAGGAGGAGATGAAC---GGGTGTGAGAAGC--CGCTGTTCTAGCACTAAGGTGGCCTTTTTTCCTCTTTCAAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115339 203 - 179258 CCTGGGGTCACAGAGCGTGAGGGGCGAGGATGAGATGAAC---GGGTGTGAGAAGC--CGCTGTTCTAGCACTAAGGTGGCCTTTTTTCCTCTTTCAAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCGCCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCGATGCTGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5590854 203 - 5823884 CCTGGGGTCACAGAGCGTGAGGGGCGAGGATGAGATGAAC---GGGGGTGAGAAGC--CGCTGTTCTAGCACTAAGGTGGCCTTTTTTCCTCTTTCAAAATCAGCTTGTCCGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTACGTTGG---GCCATGCTGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 71973 203 + 372756 CCTGGGGTCACAGAGCTTGAGGGGAGAGGATGAGATGAAT---GGGTGTGAGAAGC--TGCTGTTCTAATACTAAGGTGGCCTTTTTTCCTCTTTCAAAATCAGCTTGTCTGGCTGCCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCACCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTAGGTTGG---GCCATGCTGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307551 202 + 16356641 CCTGGGGTCACAGAGCTTGAGGGGAGAGGCTGAGATGACC----CGTGTGAGAAGC--TGCTGCTCTAGCACTAAGGCGGCCTTTTTTTCTCTTTCAAAATCAGCTTGTCTGGCTGTCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCGCCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTAGGTTGG---GCCATGCTGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176594 202 + 1231380 CCTGGGGTCCCAGAGCTTGAGGGGAGAGGATGAGATGACT----GGTGTGAGAAGC--TGCTGCTCTAGCACTAAGCCGGCCTTTTTTTCTCTTTCAAAATCAGCTTGTCTGGCTGTCCTCGTGCAAAGAAAAGTGGAGTCAAGGTGGCGCCCACCAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTAGGTTGG---GCCATGCTGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708346 199 + 11732439 CCTGGGGTCACAGAGCTGGAGGGGAGAGGACGAGACGG------TGGGTGAGAAGC--TGCTGTCCCATCACTAAGGCGGCCTCTGTTCCTCTTTCAAAATCAGCTTGTCTGGCTGCCCTCGTGCAAAGAAAAGCGGAGTTAAGGTGGCGCCCACGAAGGACGACAAGGAGGACCCCGAGCTGATGAAGTAGGTTGG---GCTGTGCTGG- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56889743 201 + 57149010 CCTGGGGTCACAGCACTTGAAGGGAGAGGATGAGATGGAC---GGGTGCA--AGGC--TGCTATTCTAGGACTAAGGTGGCCCTTTTTCCTCTTTTAAAACCAGCTTGTCAGGCTGCCCTCGTGCCAAGAAAAGTGGAGTGAAAGTGGCCCCCACCAAGGATGACAAGGAGGACCCTGAGCTGATGAAGTACGTCAG---GCCATGCTGGC i micMur3.chr18 I 181 C 0 s proCoq1.NW_012150197v1 1884400 202 - 2029793 TGGGGGGTCACAGGACTTGAAGGGAGAGGATGCCATGGAT---GGGTGTA-GAAGC--TGCTGTTCTAGGACTAAGGTGGCCCTTTTTCCTCTTTTAAAACCAGCTTGTCAGGCTGCCCTCGTGCCAAGAAAAGTGGAGTGAAAGTGGCCCCCACCAAGGATGACAAGGAGGACCCCGAGCTGATGAAGTACGTCAG---GCCGTGCTGGC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22872620 203 + 22939663 CCTGGGGTCACAGAACTAGAGAGGAGTCCATGAGATGGGT---GGGTGTGAGGAGC--TGCCATTCTGGGACTAAGGTGACCTATTTTTCTCTTTTGAAACCAGCTTGTCAGGCTGCCCTCGTGCCAAGAAAAGTGGAGTAAAGGTGGCCCCCACCAAGGATGACAAGGAGGACCCTGAGCTGATGAAGTACGTCAG---GTCATGCTGGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181815432 201 + 182113224 CAGGGGGCCACAGAACTTGAGGGAGTAGCGTGAGGCAGAC----AGTGAG-GGAGC--TGCTGTTCTGGGACTGAGGTGGCATGTTTTCCTCTTTCAAAACCAGTTTGTCAGGCTGCCCACGTGCCAAGAAGAGTGGACTCAAGGTGGCGCCTACCAAGGATGACAAGGAGGACCCCGAGTTGATGAAGTATGTTGG---GTCATGATGAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47630224 196 + 47698779 -----GATCACACAGCTGGAGGGA--GGGCTGGGGCAGAA---GTGGGTAAGAAGT--GGTCATTCTGGGACAGCCGTGGC-TTTTCTTCTTTTTCAAAACTAGCTTGTCAGGCTGCCCTCGTGCCAAGAAAAGTGGAGCCAGGGTGACACCCACAAAGGATGATAAAGAAGATCCTGAGCTGATGAAGTAAGTTGAT--GTCTTGCTGAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 269261 206 - 397369 GTGTGAGTCACAGAATGAGCCAGACGACATCGAGGGAACTCCGGGGCGCAGCAGGCGAGGCCGCTGTGGGACGAAAG-----CCTGTTCCTCTCTCACCTCCAGTTTGTCTGGTTGCCCCCGGGCCAAGAAGAGCGGGGTCAAGACCACGCCCACCAAGGACGACAAGGAGGACCCCGAGCTCATGAAGTAAGCCGGCAGGCCCTAccggc i dasNov3.JH569290 C 0 I 190 a score=673061.000000 s hg38.chr20_KI270870v1_alt 136582 44 + 183433 TCTTTCATTGCATTGCGGAATTGAGATTTTCGTGTGTTTTATAA s panTro5.chr20 66462673 44 + 66533130 TCTTCCATTGCATTGCGGAATTGAGATTTTCGTGTGTTTTATAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137721 44 + 62195757 TCTTCCATTGCATTGTGGAATTGAGATTTTCGTGTGTTTTATAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526793 44 - 578057 TCTTTCATTGCATTGCGGAATTGAGATTTTCGTGTGTTTTGTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049116 44 - 110113093 TCTTTCATTGCATTGCAGAATTGAGATTTTCCTGTGTTTTATAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782924 44 - 92844088 TCCCTCATTGCTTTGCAGAATTGAGATTTTCCTGTGTTTTGTAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96448979 44 + 96509753 TCCCTCATTGCTTTGCAGAATTGAGATTTTCCTGTGTTTTGTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919939 44 - 16982598 CCCCTCATTGCTTTGCAGAATTGAGATTTTCCTGTGTTTTGTAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722723 44 - 3785965 TCTTTCATTGCTTTGCAGAATTGAGATTTTCCTGTGTTTTGTAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90300973 44 - 90373283 TCTTTCATTGCTTTGCAGAATTGAGATTTTCCTGTGTTTTGTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115542 44 - 179258 TCTTTCATTGCTTTGCAGAATTGAGATTTTCCTGTGTTTTGTAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591057 44 - 5823884 TCTTTCATTGCTTTGCAGAATTGAGATTTTCCTGTGTTTTATAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72176 44 + 372756 TCTTTTGTTGCTTTGCAGAATTGGGATTTTCCTGTGTTTTATAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307753 44 + 16356641 TCTTTCGTTGCTTTGCAGAATTGGGATTTTCCTGTGTTTTATAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176796 44 + 1231380 TCTTTCGTTGCTTTGCAGAATTGGGGTTTTCCTGTGTTCTATAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2708545 44 + 11732439 TCCGTCGCTGCTTTGCAGAATTGGGATTTTCCTGTGTTTTATAA i aotNan1.NW_018500483v1 C 0 I 59 s micMur3.chr18 56889944 44 + 57149010 TTCTTCATTGCTTTGCAGAATTGGGATTTTCCTGTGTTTTATAA i micMur3.chr18 C 0 I 1 s proCoq1.NW_012150197v1 1884602 44 - 2029793 TTCTTCATTGCTTTGCAGAATTGGGATTTTCCTGTGTTTTATAA i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22872823 44 + 22939663 TCCTTTATTGCTTTGCAGAATTGGGATTTTCCTGTATTGTATAA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181815633 44 + 182113224 TCCTTCATTATTTTGAAAAGTTGAGATTTTTTTTTTTTTAATGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47630420 44 + 47698779 TCCCTTGGGGGTTTGCAGAATTGGGATTTTCCTGTATGTTATAA i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 269467 190 - 397369 I a score=82141.000000 s hg38.chr20_KI270870v1_alt 136626 11 + 183433 --TGTAAAAAAAC s panTro5.chr20 66462717 11 + 66533130 --TGTAAAAAAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137765 11 + 62195757 --TGTAAAAAAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526837 11 - 578057 --TGTAAGAAAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049160 11 - 110113093 --TGTAAAAAAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782968 10 - 92844088 --TGTAA-AAAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449023 10 + 96509753 --TGTAA-AAAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919983 10 - 16982598 --TGTAA-AAAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722767 10 - 3785965 --TGTAA-AAAAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301017 10 - 90373283 --TGTAG-AAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115586 10 - 179258 --TGTAA-AAAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591101 10 - 5823884 --TGTAA-AAAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72220 10 + 372756 --TGTAA-AAAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307797 10 + 16356641 --TGTAA-AAAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176840 10 + 1231380 --TGTAA-AAAAT i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56889989 10 + 57149010 --TTTAA-AAAAT i micMur3.chr18 I 1 C 0 s proCoq1.NW_012150197v1 1884647 10 - 2029793 --TTAAA-AAAAC i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22872868 10 + 22939663 --TAAAA-AAAAT i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181815677 11 + 182113224 --TTTAACTAAAC i mm10.chr2 C 0 I 2042 s canFam3.chr24 47630464 11 + 47698779 TTTTTAA-AAAG- i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 269467 190 - 397369 I e aotNan1.NW_018500483v1 2708589 59 + 11732439 I a score=203880.000000 s hg38.chr20_KI270870v1_alt 136637 21 + 183433 TC--C-TACTAGATTCCCTTTTCA s panTro5.chr20 66462728 21 + 66533130 TC--C-TACTAGATTCCCTTTTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137776 21 + 62195757 TC--C-TACTAGATTCCCTTTTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526848 21 - 578057 TC--C-TACTAGATTCCCTTTTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049171 21 - 110113093 TC--C-TACTAGATTCCCTTTTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782978 21 - 92844088 GC--C-TACTAGAGTCCCTTTTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449033 21 + 96509753 GC--C-TACTAGAGTCCCTTTTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16919993 21 - 16982598 GC--C-TATTAGAGTCCCTTTTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722777 21 - 3785965 GC--C-TACTAGAGTCCCTTTTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301027 21 - 90373283 GC--C-TACTAGAGTCCCTTTTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115596 21 - 179258 GC--C-TACTAGAGTCCCTTTTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591111 21 - 5823884 GC--C-TGCTAGAGTCTCTTTTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72230 22 + 372756 CCT-C-TACTGGATTCCCTTTTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16307807 23 + 16356641 CCTCC-TACTGGATTCCCTTTTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176850 23 + 1231380 CCTCC-TACTGGATTCCCTTTTCT i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56889999 19 + 57149010 CT--C---CTAGATTCCCTTTTCA i micMur3.chr18 C 0 I 243 s proCoq1.NW_012150197v1 1884657 19 - 2029793 CG--C---CTAGATTCCCTTTTCA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22872878 22 + 22939663 TC--CTTTCTAGATTCCCTTTTCA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47630475 19 + 47698779 ----C-TCCTAGACTCCTATTTCG i canFam3.chr24 C 0 C 0 e mm10.chr2 181815688 2042 + 182113224 I e dasNov3.JH569290 269467 190 - 397369 I e aotNan1.NW_018500483v1 2708589 59 + 11732439 I a score=83216.000000 s hg38.chr20_KI270870v1_alt 136658 7 + 183433 TTAATAC s panTro5.chr20 66462749 7 + 66533130 TTAATAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137797 7 + 62195757 TTAATAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526869 7 - 578057 TTAATAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049192 7 - 110113093 TTAATAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92782999 7 - 92844088 TTAATAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449054 7 + 96509753 TTAATAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920014 7 - 16982598 TTAATAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722798 7 - 3785965 TTAATAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301048 7 - 90373283 TTAATAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115617 7 - 179258 TTAATAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591132 7 - 5823884 TTAATAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72252 7 + 372756 TTAATAC i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16307830 7 + 16356641 TTAATAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176873 7 + 1231380 TTAATAC i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1884676 7 - 2029793 GTAATAC i proCoq1.NW_012150197v1 C 0 I 240 s otoGar3.GL873542 22872900 1 + 22939663 ------C i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47630494 7 + 47698779 TTAATAC i canFam3.chr24 C 0 C 0 e mm10.chr2 181815688 2042 + 182113224 I e micMur3.chr18 56890018 243 + 57149010 I e dasNov3.JH569290 269467 190 - 397369 I e aotNan1.NW_018500483v1 2708589 59 + 11732439 I a score=285046.000000 s hg38.chr20_KI270870v1_alt 136665 37 + 183433 AACGGGTCACCTAACTGACCAACGCCAACTTTCGTTT s panTro5.chr20 66462756 37 + 66533130 AACGGGTCACCTAACTGATCAATGCCAACTTTCGTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137804 37 + 62195757 AACGGGTCACCTAACTGATCAATGCCAACTTTCGTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526876 37 - 578057 AACGGGTCACCTAACTGATCAATGCCAACTTTCGTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049199 34 - 110113093 AACGGGTCACCTAACTGATCAATGCCAACTTTCG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783006 34 - 92844088 AATGGGTCACCTAACCGATCAATGCCAACTTTCG--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449061 34 + 96509753 AATGGGTCACCTAACCGATCAATGCCAACTTTCG--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920021 34 - 16982598 AATGGGTCACCTAACCGATCAATGCCAACTTTCG--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722805 34 - 3785965 AATGGGTCACCTAACTGATCAATGCCAACTTTCG--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301055 34 - 90373283 AATGGGTCACCTAACTGATCAATGCCAACTTTCG--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115624 34 - 179258 AATGGGTCACCTAACTGATCAATGCCAACTTTCG--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591139 34 - 5823884 AATGGGTCACCTAGCTGATCAATGGCAACTTCCG--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72260 34 + 372756 GACGGGTCACCAAACTGATCAATGCCAACATTCT--- i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16307837 34 + 16356641 GACGGGTCGCCAAACTGATCAATGCCAACATTCG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1176880 37 + 1231380 GACCGGTCACCAAACTGATCAATGCCAACATTCGTTT i cebCap1.NW_016107870v1 C 0 I 475 s otoGar3.GL873542 22872902 28 + 22939663 AACTGGTCAACAAACTGATCAATGCCAA--------- i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47630501 20 + 47698779 ------------AGCTGGTCCATGGCAATGCC----- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1884683 240 - 2029793 I e mm10.chr2 181815688 2042 + 182113224 I e micMur3.chr18 56890018 243 + 57149010 I e dasNov3.JH569290 269467 190 - 397369 I e aotNan1.NW_018500483v1 2708589 59 + 11732439 I a score=1054.000000 s hg38.chr20_KI270870v1_alt 136702 2 + 183433 CT s panTro5.chr20 66462793 2 + 66533130 CT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137841 2 + 62195757 CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526913 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 s otoGar3.GL873542 22872930 2 + 22939663 CA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1884683 240 - 2029793 I e canFam3.chr24 47630521 0 + 47698779 C e cerAty1.NW_012001373v1 3722839 0 - 3785965 C e colAng1.NW_012114444v1 5591173 0 - 5823884 C e chlSab2.chr2 90301089 0 - 90373283 C e mm10.chr2 181815688 2042 + 182113224 I e micMur3.chr18 56890018 243 + 57149010 I e dasNov3.JH569290 269467 190 - 397369 I e manLeu1.NW_012101652v1 115658 0 - 179258 C e saiBol1.JH378156 16307871 0 + 16356641 C e macNem1.NW_012014244v1 16920055 0 - 16982598 C e cebCap1.NW_016107870v1 1176917 475 + 1231380 I e calJac3.chrUn_GL286459 72294 0 + 372756 C e aotNan1.NW_018500483v1 2708589 59 + 11732439 I e nomLeu3.chr13 110049233 0 - 110113093 C e rheMac8.chr10 92783040 0 - 92844088 C e macFas5.chr10 96449095 0 + 96509753 C a score=476857.000000 s hg38.chr20_KI270870v1_alt 136704 57 + 183433 TTCATTTTTATGGAAGCTCTCATACGCTACACGTTGATACCTGTGAAGATAGGAGCC s panTro5.chr20 66462795 57 + 66533130 TTCATTTTTATGGAAGCTCTCATAGGCTACACGTTGATACCTGTGAAGATATGAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137843 57 + 62195757 TTCATTTTTATGGAAGCTCTCATAGGCTACACGTTGATACCTGTGAAGATATGAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526915 57 - 578057 TTCATTTTTATGGAAGCTCTCATACGCTACACGTTGATACCTGTGAAGATATGAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049233 53 - 110113093 ----TTTTGATGGAAGCTCTCATACACTGCACGTTGATACCTATGAAGATATGAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783040 51 - 92844088 ----TTTTTATGGAAGCTCTCATA--ATGCACGTTGGCACCTATGAAGATGTGAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449095 51 + 96509753 ----TTTTTATGGAAGCTCTCATA--ATGCACGTTGGCACCTATGAAGATGTGAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920055 51 - 16982598 ----TTTTTATGGAAGCTCTCATA--CTGCACGTTGGCACCTATGAAGATGTGAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722839 51 - 3785965 ----TTTTTATGGAAGCTCTCATA--CTGCACGTTGGCACCTATGAAGATGTGAGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301089 50 - 90373283 ----TTTTTATGGAAGCTCTCATA--CTGCAC-TTGGCACCTATGAAGATGTGAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115658 51 - 179258 ----TTTTTATGGAAGCTCTCATA--CTGCACGTTGGCACCTATGAAGATGTGAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591173 51 - 5823884 ----TTTTTATGGAAGCTCTCATG--CTGCACGTTGGCACCTGTGAAGATGTGAGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72294 53 + 372756 ----TTTTTGTGGAAGCTCTCACACCCTGCACATTGGTACCTACAAAGATGTGAGCC i calJac3.chrUn_GL286459 C 0 I 431 s saiBol1.JH378156 16307871 53 + 16356641 ----TTCTTATGGAAGCCCTTATACCCTGCACATTGGTACCGACGAAGATGTGAGCC i saiBol1.JH378156 C 0 I 425 s aotNan1.NW_018500483v1 2708648 57 + 11732439 TTCGTTTTTATGGAAGCTCTCGTGCCCTGCACATCGGTACCTACGAAGATGTGAGCC i aotNan1.NW_018500483v1 I 59 C 0 s otoGar3.GL873542 22872932 57 + 22939663 TTACCTTTTATGGAAGTTCTCATACCCTGCACATCAACACCTATGGCAGTTTGAGTC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47630521 55 + 47698779 --CATTTTTACAGAGGTTCTCCTGCTGTGCACGTGGACACCTATGAAGCTGTGAGCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1884683 240 - 2029793 I e mm10.chr2 181815688 2042 + 182113224 I e micMur3.chr18 56890018 243 + 57149010 I e dasNov3.JH569290 269467 190 - 397369 I e cebCap1.NW_016107870v1 1176917 475 + 1231380 I a score=78417.000000 s hg38.chr20_KI270870v1_alt 136761 8 + 183433 CTGGATGT s panTro5.chr20 66462852 8 + 66533130 CTGGATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137900 8 + 62195757 CTGGATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526972 8 - 578057 CTGGATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049286 8 - 110113093 CTGGATGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783091 8 - 92844088 CTGAGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449146 8 + 96509753 CTGAGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920106 8 - 16982598 CTGAGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722890 8 - 3785965 CTGAGTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301139 8 - 90373283 CTGAGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115709 8 - 179258 CTGAGTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591224 8 - 5823884 CTGGGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72778 8 + 372756 CTGGATGT i calJac3.chrUn_GL286459 I 431 C 0 s saiBol1.JH378156 16308349 8 + 16356641 CTGGATGT i saiBol1.JH378156 I 425 C 0 s aotNan1.NW_018500483v1 2708705 8 + 11732439 CTGGATGT i aotNan1.NW_018500483v1 C 0 I 425 s otoGar3.GL873542 22872989 8 + 22939663 TTGGGTGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47630576 8 + 47698779 GTGTGTGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1884683 240 - 2029793 I e mm10.chr2 181815688 2042 + 182113224 I e micMur3.chr18 56890018 243 + 57149010 I e dasNov3.JH569290 269467 190 - 397369 I e cebCap1.NW_016107870v1 1176917 475 + 1231380 I a score=17604.000000 s hg38.chr20_KI270870v1_alt 136769 4 + 183433 CGCG s panTro5.chr20 66462860 4 + 66533130 CGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137908 4 + 62195757 CGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526980 4 - 578057 CGCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049294 4 - 110113093 CGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783099 4 - 92844088 CCTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449154 4 + 96509753 CCTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920114 4 - 16982598 CGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722898 4 - 3785965 CGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301147 4 - 90373283 CGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115717 4 - 179258 CGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591232 4 - 5823884 CGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72786 4 + 372756 TGTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16308357 4 + 16356641 TGTC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22872997 4 + 22939663 CCTG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47630584 4 + 47698779 TGTA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1884683 240 - 2029793 I e mm10.chr2 181815688 2042 + 182113224 I e micMur3.chr18 56890018 243 + 57149010 I e dasNov3.JH569290 269467 190 - 397369 I e cebCap1.NW_016107870v1 1176917 475 + 1231380 I e aotNan1.NW_018500483v1 2708713 425 + 11732439 I a score=1428530.000000 s hg38.chr20_KI270870v1_alt 136773 140 + 183433 TGGAGG----GCATGGGTGCCAGATTT--TCTGGGCTTTTCAGGTCTGG-AGTATTTGACGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTATGTCTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGCAACCTGCAGAA-TTTG- s panTro5.chr20 66462864 140 + 66533130 TGGAGG----GCATGGGTGCCAGATTT--TCTGGGCTTTTCAGGTCTGG-AGTATTTGACGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTATGTCTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGCAACCTGCAGAA-TTTG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62137912 140 + 62195757 TGGAGG----GCATGGGTGCCAGATTT--TCTGGGCTTTTCAGGTCTGG-AGTATTTGACGGGCCTGGGAGAGGCAGAGCACCCTTCTACCTATGTCTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGCAACCTGCAGAA-TTTG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 526984 140 - 578057 TGGAGG----GCATGGGTGCCAGATTT--TCTGGGCTTCTCAGGTCTGG-AGTATTTGACGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTATGTCTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGCAACCTGCAGAA-TTTG- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049298 141 - 110113093 TGGAGG----GCATGGGTGCCAGATCC--TCCCGGCTTCTCAGGTCTGG-AGTATTTGGCGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTATGTCTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGCAACCTGCAGACTTTTG- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783103 141 - 92844088 TGGAGG----GCATGGGTGCCAGAGCC--TCCGGGCTTCTCGGGTCTGG-AGTATTTGACGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTATGTGTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGTAACCTGCAGACTTTTG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449158 141 + 96509753 TGGAGG----GCATGGGTGCCAGAGCC--TCCGGGCTTCTCGGGTCTGG-AGTATTTGACGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTATGTGTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGTAACCTGCAGACTTTTG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920118 141 - 16982598 TGGAGG----GCATGGGTGCCAGAGCC--TCCGGGCTTCTCGGGTCTGG-AGTATTTGACGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTATGTGTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGCAACCTGCAGACTTTTG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3722902 141 - 3785965 TGGAGG----GCATGGGTGCCAGAGCC--TCCGGACTTCTCGGGTCTGG-AGTATTTGACGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTATGTGTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGCAACCTGCAGACTTTTG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301151 141 - 90373283 TGGAGG----GCATGGGTGCCAGAGCC--TCCGGGCTTCTCAGGTCTGG-AGTGTTTGACGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTGTGTGTT---AGGGCCACCTGGGAGTGGG-------------------CCCCAGGGCCTTGCAACCTGCAGACTTTTG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115721 139 - 179258 TGGAGG----GCATGGGTGCCAGAGCC--TCCGGGCTTCTCGGGTCTGG-AGTATTTGACGGGGCTGGGAGAGGCAGAGCACCCTTCTACCTATGTGTT---AGGGCCACCTGGGAGTGGG---------------------CCAGGGCCTTGCAACCTGCAGACTTTCG- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591236 124 - 5823884 CGGAGG----GCATGGGTGCCAGAGCC--TCCGGGTTTCTCAGGTCTGG-AGTATGTGATGGGGCTGGGAGAGGCAGAGCACCCTTC-------------------ACACCTGGGAGTGGG--------------------CCCAGGGCCTTGCAACCTACAGACTTTTG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72790 160 + 372756 TGGAGG----GCATGGGTGGCAGATCC--TCTGGGCTTCTCAGGTCTGA-AGTATTTGATGGGGGTGGAAGAAGCAGAGCACCCCACTATCTGTGTCTT---AGGACCACCTGGGAGTGGGACCCAGGGCCTCAGGGTGGCCCCAGGGCTTTGCAACCTGAAGACTTTGG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16308361 160 + 16356641 TGGAAG----GCATGGGTGGCAGGTCC--TCCGGGCTTCTCAGGTCTGA-AGTATTTGATGGGGCTGGGAGAAGCAGAGCACCCTGCTACCTGTGTCTT---AGGACCACCTGGGAGTGGGACCCAGGGCCTCAGGGTGGCCCCAGGGCCTTCCAGCCTGCAGACTTTGG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1177392 160 + 1231380 TGGAGG----GCATGGGTGGCAGGTCC--TCCGGGCTTCTCAGGTCTGA-AGTATTTGATAGGGCAGGGAGAAGCAGAGCACCCCACGACCTGTGTCTT---AGGACCACCTGGGAGTGGGACCCAGGGCCTCAGGGTGGCCCCAGGGCCTTGCAGCCTGCAGACTTTGG- i cebCap1.NW_016107870v1 I 475 C 0 s aotNan1.NW_018500483v1 2709138 159 + 11732439 TGGGGG----GCGTGGGGGGCAGATCC--TCCGGGCTTCTCAGGTCTGA-AGTATTTGATGGGGCTGGGAGAAGCAGAGCACCCCAATACCTGTGTCTT---AGGACCACCTGGGAGTGGGACCCAGAGACTCA-GGTGGCCCCAGGGCCTTGCAACCTGCAGACTTTGG- i aotNan1.NW_018500483v1 I 425 C 0 s otoGar3.GL873542 22873001 153 + 22939663 TCCAGG----GCATGTTTGCTGGCCCT--TCTGGGCCTCTTAGGGCAGG-AGTGTTTGACAGGGTTTGGAGAGGCAGAGCACCCTGATGCCCGTG-ATG---GGGGCCAGCTGGGCATGGGCCTCAGGGCTACATGGTGGCCCTAGGTCCT------CTGCAGGACTTTC- i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47630588 163 + 47698779 TTGAGGTCACGCCTGGGCACTGGCTTCTGTCTGGGCTTCTCAGGTCTGGTGGTGTTTGATGGGGCCAGGAGAGGCCAAGAGCCCTGCTGCCCGTGCTCCTGGGGGGCCACCTGGT-GTGGG---CTCGGGCCTGGAGCAGCCCCACAG----GAAACCTGCACAGCTGTGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1884683 240 - 2029793 I e mm10.chr2 181815688 2042 + 182113224 I e micMur3.chr18 56890018 243 + 57149010 I e dasNov3.JH569290 269467 190 - 397369 I a score=2190154.000000 s hg38.chr20_KI270870v1_alt 136913 174 + 183433 TCTGGCAGGAAAGGTGAGATGCAGGAGTCAAGGAGGAGAAGGTGGTTAGAACAATGTTGAAGCTCCAAATCCCATGTGTCCATCCACCCACACACCTGTGCAGAGAGCTGGTA--GATTGAGAGAGCC-AGGAG----GATCTAAACTGGGAGCCAGACACTGTTGGGTGAAGGAAAGAGG s panTro5.chr20 66463004 174 + 66533130 TCTGGCAGGAAAGGTGAGATGCAGGAGTCAAGGAGGAGAAGGTGGTTAGAACAATGTTGAAGCTCCAAATCCCATATGTCCATCCACCCACACACCTGTGCAGAGAGCTGGTA--GATTGAGAGAGCC-AGGAG----GATCTAAACTGGGAACCAGACACTGTTGGGTGAAGGAAAGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62138052 174 + 62195757 TCTGGCAGGAAAGGTGAGATGCAGGAGTCAAGGAGGAGAAGGTGGTTAGAACAATGTTGAAGCTCCAAATCCCATGTGTCCATCCACCCACACGCCTGTGCAGACAGCTGGTA--GATTGAGAGAGCC-AGGAG----GATCTAAACTGGGAACCAGACACTGTTGGGTGAAGGAAAGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 527124 174 - 578057 TCTGGCAGGAAAGGTGAGATGCAGGAGTCAAGGAGGAGAAGGTGGTTAGAACAACGTTGAAGCTCCGAATCCCATGTGTCCATCCACCCACACACCTATGCAGAGAGCTGGTA--GATTGAGAGAGCC-AGGAG----GATCTAAACTGGGAACCAGACACTGTTGGGTGAAGGAACGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049439 171 - 110113093 TCTGGCAGGAAAGGTGAGATGCAGGAGTC---GAGGAGAGGGTGGTTAGAACGACGTTGAAGCTCCAAATCCCGTGTGTCCGTCCACGCACACACCTGTGCAGAGAGCTGGTA--GATGGAGAGAGCC-GGGAG----GATCTCAACTGGGACCCAGACACTGTTGGGTGAAGGAAAGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783244 171 - 92844088 TCT-GCAGGAAAGGTGAGATGCAGAAGTCAAGGAGAAGAGGGTGGTTAGAAAGACGTTGAAGCTTCGAATCCCATGTGTCCGTCCACCCACACACCTATGCAGAGAGCTGGTA--GATTGAGAGAGCC-Aggag----gatctaaactggacaccagacactgttgggtgaagga--gagg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449299 171 + 96509753 TCT-GCAGGAAAGGTGAGATGCAGAAGTCAAGGAGAAGAGGGTGGTTAGAAAGACGTTGAAGCTTCGAATCCCATGTGTCCGTCCACCCACACACCTATGCAGAGAGCTGGTA--GATTGAGAGAGCC-Gggag----gatctaaactggacaccagacactgttgggtgaaggg--gagg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920259 171 - 16982598 TCT-GCAGGAAAGGTGAGATGCAGAAGTCAAGGAGAAGAGGGTGGTTAGAAAGACGTTGAAGCTTCGAATCCCATGTGTCCGTCCACCCACACACCTATGCAGAGAGCTGGTA--GATTGAGAGAGCC-Gggag----gatctaaactggacaccagacactgttgggtgaagga--gagg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723043 171 - 3785965 TCT-GCAGGAAAGGTGAGATGCAGAAGTCAAGGAGAAGAGGGTGGTTAGAAAGACGTTGAAGCTTCGAATCCCATGTGTCCGTCCACCCACACACCTATGCAGAGAGCTGGTA--GATTGAGAGAGCC-Gggag----gatctaaactggacaccagacactgttgggtgaagga--gagg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301292 171 - 90373283 TCT-GCAGGAAAGGTGAGATGCAGAAGTCAAGGAGAAGAGGGTGGTTAGAAAGACGTTGAAGCTTTGAATCCCATGTGTCCGTCCACCCACACACCTATGCAGAGAGCTGGTA--GATTGAGAGAGCC-Gggag----gatctaaactggacaccagacactgttgggtgaagga--gagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 115860 171 - 179258 TCT-GCAGGAAAGGTGAGATGCAGAAGTCAAGGAGAAGAGGGTGGTTAGAAAGACGTTGAAGCTTCGAATCCCATGTGTCCGTCCACCCACACACCCATGCAGAGAGCTGGTA--GATTGAGAGAGCC-Gggag----gatctaaactggacaccagacactgttgggtgaagga--gagg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591360 171 - 5823884 TCT-GCAGGAAAGGTGAGGTGCAGAAGTCAAGGAGAAGAGGGTGGTTAGAAAGACGTTGAAGCTTCAAATCCCATGTGTCCGTCCACCCACACACCTATGCAGAGAGCTGGTA--GATTGAGAGAGCT-Gggag----gatctaaactggacaccagacactgttggctgaagga--gaga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 72950 175 + 372756 TCTGGCAGGAAAGGTAAGATGCAAGAGTCAAGGAGTAGAGGATGCTTAGAAAGATGTTAAAGCTTTGAATCCCATGTGTCCGTCCACCCACACACCAATGCAGAGAACTGGTA--GATTGAGAGAGCCTGGGAG----GATCTAAACTGGGAACCAGACACTGTTGGGTGAAGGAAAGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16308521 175 + 16356641 TCTGACAGGAAAGGTAAGATGCAGGAGTCAAGGAGCAGAGGGTGCTTAGAAAGATGTGAAAGCTTTGAACCCCATGTGTCCGTCCAGCCACACACCCATGCAGAGAGCTGGTA--GATTGAGAGAGCCTGGGAG----GATCTAAACTGGGAGCCAGACACTGTTGGGTGAAGGAAAGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1177552 175 + 1231380 TCTGGCAGGAAAGGTAAGATGCAGGAGCCAAGGAGCAGAGGATGCTTAGAAAGATGTTAAAGCTTTGAACCCCACATGTCCATCCAGCCACACACTGATGCAGAGAGCTGATA--GATTGAGAGAGCCTGGGAG----GACCTAAGCTGGGAGCCAGACACTGTTGGGTGAAGGAAAGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2709297 175 + 11732439 TCTGGCAGGAAAGGTTAGATGCAGGAGTCAAGGAGTAGAGGATGCTTAGAAAGACGTTAAAGCTTTGAATCCCACGTGTCCGTCCACCCACACACCGATGCAGAGAGCTGGCG--GACTGGGAgggcctgggag----ggtctaaactgggaaccagacactgttgggtgaaggaaagagg i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56890261 171 + 57149010 TCTGGCAGGAAAGTTCAGGTGCAGAAGTCCAGAAGGAAAGGATGGTTAGAAAGACGTTGGACCTTTGAATCCTCTGTGTCCAAACATCCACACCCCTGTGCAGAGAGCAGGTA--GGGTGAGATTGTCCAGGAA----GATCAAAACTGGGAACTAGACACTGCT----GGAGGAGAGAGG i micMur3.chr18 I 243 C 0 s proCoq1.NW_012150197v1 1884923 174 - 2029793 TCTGGCAGGAAAGGTCAGGTGCAGAAGTCCAGAAGGAAAGGATGGTTAGAAAGACGTTGGACCTTTGAATCCTGTGTGTCCAGCCATCCACACCCCTGTGCAGAGAGCAGGTA--GGGTGAGAATGCCCAGGAT----GATCAAAACTGGGAACTAGACACTGCTGGA-GGAGGAGAGAGG i proCoq1.NW_012150197v1 I 240 C 0 s otoGar3.GL873542 22873155 170 + 22939663 TCTGTCAGAAAGGGTCAGGTATAGAAGTCTAGGAGGAGAGGATAGTTAAAAAGATTATGGATCTTTGAATCCTGCATATCCACCTAT-CACACCCCTCTGCAGAGATCAGGTA--GAATGAGAGAGCCCAGGAT----GGTCAAAACTCGGAACCAGACACTGCT----GGAGGAGAGAGG i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47630751 172 + 47698779 TCTGACGGGGAAGGTCAGGTGCCAGAGTCGAGGAGCACAGGATGGTTAGAAAGATGGCCAG--TCTGAACTGTGTGTGTCTGCACACTCACATATGTCTGCAGGGAGCTGATATGGAAAGAGGGAGCTCCAGAGCGTTGCCCTGAACTGGGACCTCGACACTGCTGTGGGGAGG------- i canFam3.chr24 C 0 C 0 e mm10.chr2 181815688 2042 + 182113224 I e dasNov3.JH569290 269467 190 - 397369 I a score=308506.000000 s hg38.chr20_KI270870v1_alt 137087 24 + 183433 ACATCTTG----GGCCTTAAGTGACCC-A s panTro5.chr20 66463178 24 + 66533130 ACATCTTG----GGCCGTAAGTGACCC-A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62138226 24 + 62195757 ACATCTTG----GGCCTTAAGTGACCC-A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 527298 24 - 578057 ACATCTTG----GGCCTTAAGTGACCC-A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049610 24 - 110113093 ACATCCTG----GGCCTTAAGTGACCC-A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783415 25 - 92844088 acatcctt----ggccttAAGTGACCCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449470 25 + 96509753 acatcctt----ggccttAAGTGACCCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920430 25 - 16982598 acatcctt----ggccttAAGTGACCCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723214 25 - 3785965 acatctgt----ggccttAAGTGACCCAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301463 25 - 90373283 acatcctt----ggccttAAGTGACCCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116031 25 - 179258 acatctgt----ggccttAAGTGACCCAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591531 25 - 5823884 acatcctt----ggccttAAGTGACCCAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 73125 24 + 372756 ACATCCTC----AGCCTTAAGTGACCC-A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16308696 24 + 16356641 ACGTCTTT----GGCCTTAAGTGACCC-A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1177727 24 + 1231380 ACATCCTC----GGCCTTAAGTGACCC-A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2709472 24 + 11732439 acatcctc----ggccttAAGTGACCC-A i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56890432 24 + 57149010 ACATCTTC----AGCCTTAAGTGACCC-A i micMur3.chr18 C 0 I 213 s proCoq1.NW_012150197v1 1885097 24 - 2029793 ACATCTTC----GGCCTTAAGTGACCC-A i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22873325 24 + 22939663 ATATCATC----AGCCTTAGATGGCTC-A i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181817730 28 + 182113224 ACATCTTTTGTGGATCTTAAGTGACAC-A i mm10.chr2 I 2042 C 0 s canFam3.chr24 47630923 17 + 47698779 -----------GGGCCTTACGGGATCT-A i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 269467 190 - 397369 I a score=49514.000000 s hg38.chr20_KI270870v1_alt 137111 3 + 183433 AGT s panTro5.chr20 66463202 3 + 66533130 AGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62138250 3 + 62195757 AGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 527322 3 - 578057 AGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049634 3 - 110113093 AGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783440 3 - 92844088 AGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449495 3 + 96509753 AGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920455 3 - 16982598 AGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723239 3 - 3785965 AGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301488 3 - 90373283 AGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116056 3 - 179258 AGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591556 3 - 5823884 AGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 73149 3 + 372756 AGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16308720 3 + 16356641 AGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1177751 3 + 1231380 AGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2709496 3 + 11732439 AGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1885121 3 - 2029793 AGT i proCoq1.NW_012150197v1 C 0 I 226 s otoGar3.GL873542 22873349 3 + 22939663 AGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181817758 3 + 182113224 TGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47630940 3 + 47698779 AGT i canFam3.chr24 C 0 C 0 e micMur3.chr18 56890456 213 + 57149010 I e dasNov3.JH569290 269467 190 - 397369 I a score=648967.000000 s hg38.chr20_KI270870v1_alt 137114 106 + 183433 CCTTGAGGAGAAAAGATTCTCCTCTATTGCTCTTCTCACTGGGGCAGGGTGGG--------GGCTCGTGTGTCTTTGTGGGGCTTATAGGTGAAC-------CCTGACTCTGTGTG-TTATC s panTro5.chr20 66463205 106 + 66533130 CCTTGAGGAGAAAAGATTCTCCTCTATTGCTCTTCTCACTGGGGCAGGGTGGG--------GGCTCATGTGTCTTTGTGGGGCTTATAGGTGAAC-------CCTGACTCTGTGTG-TTATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62138253 106 + 62195757 CCTTGAGGAGAAAAGATTCTCCTCTATTGCTCTTCTCACTGGGGCAGGGTGGG--------GGCTCATGTGTCTTTGTGGGGCTTATAGGTGAAC-------CCTGACTCTGTGTG-TTATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 527325 106 - 578057 CCTTGAGGAGAAAAGATTCTCCTCTATTGCTCTTCTCACTGGGGCAGGGTGGG--------AGCTCACGTGTCTTTGTGGGGCTTATAGGTGAAC-------CCTGACTCTGTGTG-TTATC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049637 106 - 110113093 CCTTGAGGCAACAAGATTCTCCTCTATTGCTCTTCTCACTGGGGCAGGGTGGG--------GGCTCACGTGTCTTTGTGGGGTTTATAGGTGAAC-------CCTGACTCTGTGTG-TTATC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783443 84 - 92844088 CCTTGAGGCAAACAGAATCTCCTCTGTTGCTCTCCCCACTGGGGCAGG----------------------------GTGGGGCTGACAGGTGAAC-------CCTGCCTC--TGTG-TTGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449498 84 + 96509753 CCTTGAGGCAAACAGAATCTCCTCTGTTGCTCTCCCCACTGGGGCAGG----------------------------GTGGGGCTGACAGGTGAAC-------CCTGCCTC--TGCG-TTGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920458 84 - 16982598 CCTTGAGGCAAACAGAATCTCCTCTGTTGCTCTCCCCACTGGGGCAGG----------------------------GTGGGGCTGACAGGTGAAC-------CCTGCCTC--TGTG-TTGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723242 102 - 3785965 CCTTGAGGCAAACAGAATCTCCTCTGTTGCTCTCCCCACTGGGGCAGGGTGGG---------GCTGAC-TGTCTTCGTGGGGCTGACAGGTGAAC-------CCTGCCTC--TGTG-TTGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301491 84 - 90373283 CCTTGAGGCAAAAAGAATCTCCTCTGTTGCTCTCCCCACTGGGGCAGG----------------------------GTGGGGCTGACAGGTGAAC-------CCTGCCTC--TGTG-TTGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116059 102 - 179258 CCTTGAGGCAAACAGAATCTCCTCTGTTGCTCTCCCCACTGGGGCAGGGTGGG---------GCTGAC-TGTCTTCGTGGGGCTGACAGGTGAAC-------CCTGCCTC--TGTG-TTGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591559 103 - 5823884 CCTTGAGGCAAAAAGAATCTCCTCTGTAGCTCTCCCCACTGGGGCAGGGTGGG---------GCTGACGTGTCTTTGTGGGGCTCACAGGGGAGC-------CCTGACTC--TGCG-TTGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 73152 94 + 372756 CCTTGAGGCAAAACGACTCTCCTCTATTGCTCTTCTAACTGGGGCAAGGTG---------------------------GGGGCTGATAGGTGGACCCTGAACCCTGACTCTGCGTG-TTACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16308723 94 + 16356641 TCTTGAGGCAAAACGACTCTCCTCTGTTGCTCTTCTTACTGGGGCAAGGCA---------------------------GGGGCTGACAGGTGAACCCTGAGCCCTGACTCTGCGTG-TTACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1177754 93 + 1231380 CCTTGAGGTGAAACGACTCGCCTCTATTGCTCTTCTTACTGGGGCAAGGCG---------------------------GGGGCTGACAGGTGAACCCTGAA-CCTGACTCTGTGTG-TTACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2709499 93 + 11732439 CCTTGAGGCAAAACGACTCTCCTCTATTGCTGTTCTTACTGGGGCAAGGC----------------------------GGGGCTGACAGGTGAACCCTGAACGCTGACTCTGCGTG-TTACC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22873352 70 + 22939663 TTCTGAAGCAAAAATA-----CTCTATTGCCCTTCTTTCTTGGCTCGTGTG---------------------------GTGGCTCGTGTGTG----------GCTGGTTC----------TC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181817761 111 + 182113224 CCCTGAAGCAAAAATACAGTTGACTATTTCCATTCTC-CTGGGGCAAAGTTGGGGTAGGGTGGGTGATATTTCCTCTGGGGGCTTATGGG-AAAC-------TTTGACCTTATGTG-ATGA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47630943 86 + 47698779 CCTTGAGAC-----------CCACTCCCAACCATCTCTCGGGGGT----------------GCCTAGTGTGTCATCAGGGGGATTGTGTGTGAAT-------GCTGACCC--TGTGAATGCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1885124 226 - 2029793 I e micMur3.chr18 56890456 213 + 57149010 I e dasNov3.JH569290 269467 190 - 397369 I a score=1212401.000000 s hg38.chr20_KI270870v1_alt 137220 111 + 183433 CTACTTGGTG--GGGGTTTGTGTCCTTACAAGCTTATTCTCCCAATAGGGAACGGGTCCCCTGCA-CTGCCCACTTTTAGGTGGGGGGAATGCTTTGCTACAGACTCAGACCAG s panTro5.chr20 66463311 111 + 66533130 CTACTTGGTG--GGGGTTTGTGTCCTTGCAAGCTTATTCTCCCAATAGGGAACGGGTCCCCTGCA-CTGCCCACTTTTAGGTGGGGGGAATGCTTTGCTACAGACTCAAACCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62138359 111 + 62195757 CTACTTGGTG--GGGGTTTGTGTCCTTGCAAGCTTATTCTCCCAATAGGGAACGGGTCCCCTGCA-CTGCCCACTTTTAGGTAGGGGGAATGCTTTGCTACAGACTCAAACCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 527431 110 - 578057 CTGCTTGGT---GGGGTTTGTGTCCTTGCAAGCTTATTCTCCCAATAGGGAACGGGTCCCCTGCA-CTGCCCACTTTTAGGTGGGGGGAATGCTTTGCTACAGACTCAAACCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049743 111 - 110113093 CTACTTGGTG--GGGGTTTGTGTCCTTGCAAGCTTATTCTCCCAATAGGGAACGGGTCCCCTGCA-CTGCCCACTCTTAGGTGGGGGGAATGCTTTGCTACAGACTCAAACCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783527 111 - 92844088 TTACTCAGTG--GGGGTTTGTGTCCTCGCAAGCCTATTCTCCCAATAGGGGGTGGGTCCCCTGCA-CTGCCCACTTGTAGGTGGGGGCAATGCTTTGCCACAGACTCAAACCGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449582 111 + 96509753 TTACTCAGTG--GGGGTTTGTGTCCTCGAAAGCCTATTCTCCCAATAGGGGGTGGGTCCCCTGCA-CTGCCCACTTGTAGGTGGGGGCAATGCTTTGCCACAGACTCAAACCGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920542 111 - 16982598 TTACTCAGTG--GGGGTTTGTGTCCTCGCAAGCCTATTCTCCCAATAGGGGGTGGGTCCCCTGCA-CTGCCCACTTGTAGGTGGGGGCAATGCTTTGCCACAGACTCAAACTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723344 111 - 3785965 TTACTCGGTG--GGGGTTTGTGTCCTCGCAAGCCTATTCTCCCAATAGGGGGTGGGTCCTCTGCA-CTGCCCACTTGTAGGTGGGGGCAATGCTTTGCCACAGACTCAAACCGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301575 111 - 90373283 TTACTCGGTG--GGGGTTTGTGTCCTCGCAAGCCTATTCTCCCAATAGAGGGTGGGTCCCCTGCA-CTGCCCACTTGTAGGTGGGGGCAATGCTTTGCCACAGACTCAAACCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116161 111 - 179258 TTACTCGGTG--GGGGTTTGTGTCCTCGCAAGCCTATTCTCCCAATAGGGGGTGGGTTCCCTGCA-CTGCCCACTTGTAGGTGGGGGCAATGCTTTGCCACAGACTCAAACCGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591662 111 - 5823884 TTACTCGGTG--GGGGTTTGTGTCCTCGCAAGCCTATTCTCCCAATAGGGGATGGGTCCCCTGCA-CTGCCCACTTGTAGGTGGGGGCAATGCTTTGCCACAGACTCGAACCGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 73246 111 + 372756 CTACTTGGTG--GGGGTTTGTGTCCTTGCAAGCTTATTCTCCCAGTAGGGAACTGGTTCCCTGCA-CTGCCCACTTGTAGTTGGGGGCAATGCTTTGCCAGAGACTTGAACTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16308817 111 + 16356641 CTACTCGGTG--GGGATTTGTGTCCTTGCAAGCTTATTCTCCCAGTAGGGAACTGGTTCCCTGCA-CTGCCCACTTGTAGGTGGGGGCAATGCTTGGCCACAGACTTGAACTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1177847 111 + 1231380 CTACTCAGTG--GGGGTTTGTGTCCTTGCAAGCTTATTCTCCCAGTAGGGAACTGGTTCCCTGCA-CTGCCCAGTTGTAGGTGGGGGCAATGCTTTGCCACAGACTTGAACTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2709592 111 + 11732439 CTACTCGGTG--GGGGTTTGTGTCCTTGCAAGCTTATTCTCCCGGTAGGGAACTGGTTCCCTGCA-CTGCCCACTTGTAGGTGGGGGCAATGCTTTGCCACAGACTTGAACTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22873422 93 + 22939663 TCACACAGAG-TGGGGCTTGCACTGCTGCAAGCTTGTTCTCC------------------CTGCA-CTGCCCACTTGTATGTGGAGGCAATGCTGTGCTGCTG-CTCATACAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181817872 95 + 182113224 --AGTCAGTA--GGTACTTGTACTGCTGTAAG------------ATAGGGAGCTAGTTTCCTGCAGCAACTCACTCTTTTGCAGGT---ATGACCTGTCACAGGCTCAAATAGG i mm10.chr2 C 0 I 1 s canFam3.chr24 47631029 74 + 47698779 CCACTTGCTACTGGGA---GTGCCCT---------------------------GAGTCCCCTGC--TTGCCC--------GTAGGGGCGAGGCTGGGCCACAGGGGGAAACAGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 269657 107 - 397369 CCACTCAGT---GGGGCTCAGACCACTTCCAGCTTGTTCTCCTG--CGGGAGCATGCCTCCCGGC-ACCCCCACTT-TGGGTGGGGGCAAGGCTGTGCCAGAGGCACAGACAAG i dasNov3.JH569290 I 190 C 0 e proCoq1.NW_012150197v1 1885124 226 - 2029793 I e micMur3.chr18 56890456 213 + 57149010 I a score=614011.000000 s hg38.chr20_KI270870v1_alt 137331 50 + 183433 GTGACCCACTGGCCATTTTGCCCAGGACCGAGGTACTTTCAGAGCTGACA s panTro5.chr20 66463422 50 + 66533130 GTGACCCACTGGCCATTTTGCCCAGGACCGAGGTACTTTCAGAGCTGACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62138470 50 + 62195757 GTGACCCACTGGCCATTTTGCCCAGGACCGAGGTACTTTCAGAGCTGACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 527541 50 - 578057 GTGACCCACTGGCCATTTTGCCCAGGACTGAGGTACTTTCAGAGCTGACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049854 29 - 110113093 GTGACCCACTGGCCATGTTGCCCAGGGCC--------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783638 50 - 92844088 GTGGCCCACTGGCCAATGTGCCCAGGACCGAGTTACTTTCAGAGCTGACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449693 50 + 96509753 GTGGCCCACTGGCCAATGTGCCCAGGACCGAGGTACTTTCAGAGCTGACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920653 50 - 16982598 GTGGCCCACTGGCCAATGTGCCCAGGACCGAGGTACTTTCAGAGCTGACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723455 50 - 3785965 GTGGCCCACTGGCCAATGTGCCCAGGACCAAGGTACTTTCCGAGCTGACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301686 50 - 90373283 GTGGCCCACTGGCCAATGTGCCCAGGACCGAGGTACTTTCAGAGCTGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116272 50 - 179258 GTGGCCCACTGGCCAATGTGCCCAGGACCAAGGTACTTTCCGAGCTGACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591773 50 - 5823884 GCGGCCCACTGGCCAATGTGCCCAGGACCGAGGTACTTTCAGAGCTGACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 73357 50 + 372756 GTGACCAACTGGTCAGTCTGCCCAGGACTGACGTACTTTCAGAGTTGACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16308928 48 + 16356641 GTGACC--CTGGCCAGTCTGCCCGGGACAGAGGTACTTTCAGCGTTGACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1177958 50 + 1231380 TTGACCCACTGGCTAGTTTGCCCAGGACCGAGGTACTTTCAGAGTTGACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2709703 50 + 11732439 GTGACCGACCGGCCAGTTTGCCCAGGACCGAGGTACTTTCAGAGTTGACA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56890669 50 + 57149010 GTGACCCACTGGCCAGTGTTCCCAGGACCAAGGGATTTTCAGAGCTGACA i micMur3.chr18 I 213 I 274 s proCoq1.NW_012150197v1 1885350 50 - 2029793 GTGACCCACTGGCCAGTTTTCCCAGGACCAAGGGATTTTCAGAGCTGACA i proCoq1.NW_012150197v1 I 226 I 295 s otoGar3.GL873542 22873515 50 + 22939663 GGGACCTACTGGCCAGTTTGTTCAGAACCAAGGGGTTTTCAGAGCTGACA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181817968 18 + 182113224 ATTACCCACTGACCAATT-------------------------------- i mm10.chr2 I 1 C 0 s canFam3.chr24 47631103 42 + 47698779 GTGAACCACCATTCAACTTTCCCAGGAC--------TTTCAGAGCTGACA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 269764 40 - 397369 GTGGCC--CCATCTggtttccc---gtacaggggactctcagtgc----- i dasNov3.JH569290 C 0 C 0 a score=2776546.000000 s hg38.chr20_KI270870v1_alt 137381 307 + 183433 TCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGCAGAGTGGAAATGA------TGGCTCTGGACACCTTGTTGCCCAGGG-TTAGGGGCCGGCTCGGTCGGGACGGGG---C---CCTACTATGCCCGCAGGAAGCAGG-T-TGCCCTCGTTGTGTTACCTGCTGGGCCAAGAGCAGCCAGAC-CTCACGC--C-CGGGGA---GGGGCAACTTGGCCTGAGATTGGGTTGCTCCTCCTGGTAG-TTTGCTCCAGCTGTGCCCAAACA----CCCGGCCACACTGGAGGAGCCTAATTGACCAACATCACATCCTTCAGACGGGGA-TGGG s panTro5.chr20 66463472 311 + 66533130 GCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGCAGAGTGGAAATGA------TGGCTCTGGACACCTTGTTGCCCAGGG-TCAGGGGCCGGCTCAGTCGGGACAGGG---C---CCTACTATGCCCACAGGAAGCAGG-T-TGCCCTCATTGTGTTACCTGCTGGGCCAAGAGCAGCCAGAC-CTCACGC--C-CGAGGA---GGGGCAACTTGGCCTGAGCTTGGGTTGCTCCTCCTGGTAG-TTTGCTCCAGCTGTGCCCAAACATCTGCTCGGCCACACTGGAGGAACCTAATTGACCAACATCACATCCTTCAGACGGGGA-TGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62138520 311 + 62195757 GCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGCAGAGTGGAAATGA------TGGCTCTGGACACCTTGTTGCCCAGGG-TCAGGGGCCGGCTCGGTCGGGACAGGG---C---CCTACTATGCCCACAGGAAGCAGG-T-TGCCCTCATTGTGTTACCTGCTGGGCCAAGAGCAGCCAGAC-CTCACGC--C-CGGGGA---GGGGCAACTTGGCCTGAGCTTGGGTTGCTCCTCCTGGTAG-TTTGCTCCAGCTGTGCCCAAACAGCTGCTCGGCCACACTGGAGGAACCTAATTGACCAACATCACATCCTTCAGACGGGGA-TGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 527591 311 - 578057 TCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGCAGAGTGGAAATGA------TGGCTCTGGACACCTTGTTGCCCAGGG-TTAGGGGCCGGCTCGGTCGGGACAGGG---C---CCTACTATGCCCACAGGAAGCAGG-T-TGCCCTCATTGTGTTACCTGCTGGGCCAAGAGCAGCCAGAC-CTCACGC--C-CGGGGA---GGGGCAACTTGGCCTGAGATTGGGTTGCTCCTCCTGGTAGTTTTGCTCCAGCTGTGCCCAAACATCTGCTCGGCCACACTGGAGGAACCTATTTGACCAACATCACAT-CTTCAGACGGGGA-TGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110049883 232 - 110113093 ---------------------------------------------------------------------------------------TTGGGGCTGGCTTGGTCGGGACAGGG---C---CCTACTATGCCCACAGGAAGCAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGAGCAGCCAGAC-AGCACCC--C-CGGGGA---CGGGCAGCTTGGCCTGAGATTGGGTTGCTCCTCCTGGTAG-TTTGCTCCAGCTGTGCCCAAACATCTGCTCGGCCACACTGGAGGAACCTAATTGACCAACATCACATCCTTCAGAAGGGGA-TGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783688 290 - 92844088 TCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGC--GGTGGAAATGA------TGGCTCTGGACACTTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTCGGGACAGGG---C---CCTACTATGTCCACAGGAAACAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGGGCAGGCAGAC-CTCACCC--C-CGGGGA--GGGGGCAACTTGTCC-GAGATTGGGTTGCCCCTCTTGGTAG-CTCGCTCCAGCTGTGCCC-------------------CTGGAGGAACCTAACTGACCAACATCACATCCTTCGGA-AGGGC-TGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96449743 290 + 96509753 TCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGC--GGTGGAAATGA------TGGCTCTGGACACTTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTCGGGACAGGG---C---CCTACTATGTCCACAGGAAACAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGGGCAGGCAGAC-CTCACCC--C-CGGGGA--GGGGGCAACTTGTCC-GAGATTGGGTTGCCCCTCTTGGTAG-CTCGCTCCAGCTGTGCCC-------------------CTGGAGGAACCTAACTGACCAACATCACATCCTTCGGA-AGGGC-TGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920703 290 - 16982598 TCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGC--GGTGGAAATGA------TGGCTCTGGACACTTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTCGGGACAGGG---C---CCTACTATGTCCACAGGAAACAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGGGCAGGCAGAC-CTCACCC--C-CGGGGA--GGGGGCAACTTGTCC-GAGATTGGGTTGCCCCTCTTGGTAG-CTCGCTCCAGCTGTGCCC-------------------CTGGAGGAACCTAACTGACCAACATCACATCCTTCGGA-AGGGC-TGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723505 290 - 3785965 TCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGC--GGTGGAAATGA------TGGCTCTGGACACTTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTCGGGACAGGG---C---CCTACTATGTCCACAGGAAACAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGGGCAGGCAGAC-CTCACCC--C-CGGGGA--GGGGGCAACTTGGCC-GAGATTGGGTTGCCCCTCTTGGTAG-CTCGCTCCAGCTGTGCCC-------------------CTGGAGGAACCTAACTGACCAACATCACATCCTTCGGA-AGGGC-TGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90301736 290 - 90373283 TCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGC--AGTGGAAATGA------TGGCTCTGGACACTTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTCGGGACAGGG---C---CCTACTATGCCCACAGGAAACAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGGGCAGGCAGAC-CTCACCC--C-CAGGGA--GGGGGCAACTTGTCC-GAGATTGGGTTGCCCCTCTTGGTAG-CTCGCTCCAGCTGTGCCC-------------------CTGGAGGAACCTAACTGACCAACATCACATCCTTCGGA-AGGGC-TGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116322 290 - 179258 TCTGGCAAAATGGGCAGTGGGTTCCCCAG-CAGGTGAGC--GCTGGAAATGA------TGGCTCTGGACACTTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTCGGGACAGGG---C---CCTACTATGTCCACAGGAAACAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGGGCAGGCAGAC-CTCACCC--C-CGGGGA--GGGGGCAACTTGTCC-GAGATTGGGTTGCCCCTCTTGGTAG-CTCGCTCCAGCTGTGCCC-------------------CTGGAGGAACCTAACTGACCAACATCACATCCTTCGGA-AGGGC-TGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5591823 290 - 5823884 TCTGGCAAAACGGGCAGTGGGTTCCCCAG-CAGGTGAGC--GGCGGAAGTGA------TGGCTCTGGACACTTTGTTGCCCGGGGCCTTAGGGCTGGCTTGGTCGGGACACGG---C---CCTACTATGCCCACAGGAAGCAGG-T-TGTGCTGATTGTGTTACCTGCTGGGCCAAGGGCAGGCGGAC-CTCACCC--C-CGGGGA--GGGGGCAACTTGGCC-GAGATTGGGTTGCCCCTCTTGGTAG-CTCGCTCCAGCTGTGCCC-------------------CTGGAGGAACCTAACTGACCAACATCACACCCTTCGGA-AGGGC-TGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 73407 309 + 372756 TCTGGCAAAATGGGCAGTGAGTTCCCCAG-CAGGTGAGC--AGTGGAAGTGA------TGGCTCTGGACACCTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTGGGGACAGGG---C---CCCACCATGCCCACAGGAAGCAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGAGCAGCCAGAC-CTCACCC--C-TGGAGA---GGGGCAATTT-GCCTGAGAGTGGGTTGCTCCTCCTGGTAG-GTTGCTCCAGCTGGGCCCAAACATCTGCTCTGCCACACTGGAGGAGCCTGATCAGCCAACGTCACATCCTTCAGAAGGGGA-TGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16308976 310 + 16356641 TCTGTCAAAATGGGCAGTGAGTTCCCCAG-CAGGTGAGC--ATTGGAAATGA------TGGCTCTGGGTACCTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTGGGGACGGGG---C---CCCACCATGCCCACAGGAAGCAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGAGCAGCCAGAC-CTCACCC--C-TGGAGA---GGGGCAACTTGGCCTGAGAGTGGGTCACTCCTCCTGGTAG-CTTGCTCCAGCTGGGCCCAAGCACCTGCTGTGCCACACTGGAGGAGCCTGATGGGCCAACATCACATCCTTCAGAAGGGGA-TGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1178008 313 + 1231380 TCTGGCAAAATGGGCAGTGAGTTCCCCAG-CAGGTGAGC--AGTGGAAGTGA------TGGCTCTGGACACCTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTGTGGACAGGG---CCCACCCGCCATGCTCACAGGAAGCAGG-T-TGCCCTGATTGTGTTACCTGCTGGGCCAAGAGCAGCCAGAC-CTCACCC--C-TGGAGA---GGGGCAACTTTTCCTGAGAGTGGGTTGCCCCTCCTGGTAG-CTTGCTCCAGCTGGGCCCAAACACCTGCTCTGCCACACTGGAGGAGCCTGATTGGCCAACATCATATCCTTCAGAAGTGGA-TGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2709753 296 + 11732439 TCTGGCAGAATGGGCAGTGAGTTCCCCAG-CAG----------CAGAAGTGA------CGGCTCTGGACACCTTGTTGCCCAGGGCCTTGGGGCTGGCTTGGTGGGGACAGGG---C---CCCACCATGCCCACAGGAAGCAGG-T-TGCCCTGACTATGTTACCTGCTGGGCCAAGAGCAGCCAGAC-CTCAGCC--C-TGGAG----GGGGCACCTTTGCCTGAGAGTAGGTTGCTCCTCCTGGTA-----GCTCCAGCTGGGCCCAGACGTCTGCTCTGCCACACTGGAGGGGCCTGGCTGGCCAACATCACATCCTTCAGAAGGGG--TGGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22873565 293 + 22939663 -TTGGCAAAACAGGTAGTCGGTCTTCTGG-CAGGTGAGC---ATGGAAGAGACAGCTCTGGCTCTGGCTGCCTTGATGCCCAGGGCCTTGGGGCTGGCTTGCTTGGGGCAGGG-------CCTGGCAGGCCCACATGAAATAGGTT-TGCCCTGAATGTGTTATCTGCTGGGCTAAGAGCAGCCATG--GTCACCC--C-TGCAGA---AAGGTAGCTTTACCCCAGATTTGGT----------------C---CCTCAGGTGTGCCTAAATATCTGCTTGGCCATAGGGGAGGGGTCTGA-TGACAAGCATGACATCCTTCAGA-AGGAG-AAGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181817986 288 + 182113224 ---AGTAAAATGGACAGAAGGTTCCCCAC-CAGGCAAACAGAACAGGTGTCT------TTGTTTTGGG------GGTTATCAGGA--TTTAGGCT-GCTTGATGGGGCTGGG--------CCCAGTGGGCTTTCAAGAAGCAAGCC-TTCCTTGACTGTGTTGTTTACTGGGCCAATAACACCCAG----TCACTC--A-CTTAGACAAAAAACAACTTGGCCTGGGATTACACTTCTCC------CAG-CTTGTTCCAGCTGTAGTC-AAAATTGAGTTAGCCACACAATAAAGGCCCAA----CCAGCCTCACATCATTCAGAAGGGGT-TGCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47631145 291 + 47698779 ----GTGGACAAAGCAGCAGGTCCCCTTGCCAGTTGAGG--ACTGGAAGGAA------CAGTTCTGGCTGCATCGTGGTGCAGGC-CTTGAGGCTGGCGTGGTCAGGGCCAGG---T---CCC----------CAGAAGGCAGG-TCTGCTCTGATTG-GTTGCCG--TGGGTCAAGAATAGCTGGATGCTCACCC--AGCAGAGG---GGATCAATCTGGACCAAGGGTCTATAGCTCCTT---GGAG-CTCACCCCAGCTGCATGCAAACATCTGCTTGGTCACAGAAGAGAGGCCTGATGGGCCAGCATCACATCCTTCAA--GGGGC-CAGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 269804 168 - 397369 -----caaaac---caggggggtcctgga-c---caagc-------agatgg------tg--------------gttacccAGAG--------------------AAGCAGGGGATC---CCCA-----------------AAG-C-TGCCCT------------------------------------GTCACCCTGC-CGTGGG-------------GGCCGGTGCTCAGGG-----CTCATGGCAG-CTGGCT-----TGTGCCCTGGCAG-------------CTGGTGG------------TAGCATCTTGTCCTTCAGAAGGGGCATGG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1885400 295 - 2029793 I e micMur3.chr18 56890719 274 + 57149010 I a score=388337.000000 s hg38.chr20_KI270870v1_alt 137688 25 + 183433 --CCCACCAGCTGTTTGGTGTAAT-AGG- s panTro5.chr20 66463783 25 + 66533130 --CCCACCAGCTGTTTGGTGTAAT-AGG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62138831 25 + 62195757 --CCCACCGGCTGTTTGGTGTAAT-AGG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 527902 25 - 578057 --CCCACCAGCTGTTTGGCGTAAT-AGG- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050115 25 - 110113093 --CCCACCAGCTGTTTGGTGTAAT-AGG- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92783978 25 - 92844088 --CCCAGCAGCTGTTTGGTGTAAT-AGG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450033 25 + 96509753 --CCCAGCAGCTGTTTGGTGTAAT-AGG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16920993 25 - 16982598 --CCCAGCAGCTGTTTGGTGTAAT-AGG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723795 25 - 3785965 --CCCAGCAGCTGTTTGGTGTAAT-AGG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302026 25 - 90373283 --CCCACCAGCTGTTTGGTGTAAT-AGG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116612 25 - 179258 --CCCAGCAGCTGTTTGGTGTAAT-AGG- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592113 25 - 5823884 --CCCACCAGCTGTTTGGTGTAAT-AGG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 73716 25 + 372756 --CCCCCCAGCTGTTTGGCATGAT-AGG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16309286 25 + 16356641 --CCCACCAGCTGTTTGGTATGAT-AGG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1178321 21 + 1231380 --CCCA----CTGTTTGGTATGAT-AGG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710049 25 + 11732439 --CCCGCCAGCTGTTTGGTATGAT-AGG- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56890993 26 + 57149010 --CCCACCAGCTGTTTGGTGTAATAAGG- i micMur3.chr18 I 274 C 0 s proCoq1.NW_012150197v1 1885695 26 - 2029793 --CCCGCCAGCTGTTTGGTGTAATAAGG- i proCoq1.NW_012150197v1 I 295 C 0 s otoGar3.GL873542 22873858 26 + 22939663 --CTCACCAGCTTTTAGGTGTAATAAAG- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181818274 25 + 182113224 --ACCACCAACCATTTAGTCTAAT-GGG- i mm10.chr2 C 0 I 628 s canFam3.chr24 47631436 25 + 47698779 --TCCACCAGCTGTTTGGTGTAAA-AAG- i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 269972 28 - 397369 CTCTTGCCAGCTGTTTGATGTAAT-AAGG i dasNov3.JH569290 C 0 C 0 a score=1099250.000000 s hg38.chr20_KI270870v1_alt 137713 79 + 183433 CTGTGGCTTGTTTA--------TTTATTTAA-TTTTTACAATAAAACTGTAATGAATGCTAAATTAACAATGCAAAATTT-TGGTTGTT s panTro5.chr20 66463808 79 + 66533130 CTGTGGCTTGTTTA--------TTTATTTAA-TTTTTACAATAAAACTGTAATGAATGCTAAATTAACAAGGCAAAATTT-TGGTTGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62138856 79 + 62195757 CTGTGGCTTGTTTA--------TTTATTTAA-TTTTTACAATAAAACTGTAATGAATGCTAAATTAACAAGGCAAAATTT-TGGTTGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 527927 79 - 578057 CTGTGGCTTGTTTA--------TTTATTTAA-TTTTTACAATAAAACTGTAATGAATGCTAAATTAACAATGCGAAATTT-TGGTTGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050140 80 - 110113093 CTGTGGCTTGTTTA--------TTTATTTAA-TTTTTACAATAAAACTGTAATGAATGCGAAATTAACAATGCAAAGTTTGTGGTTGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784003 76 - 92844088 CTGTGGCTTGTTTG--------TTTAT-----TTTTTATAATAAAACTGTAATGAATGCTAAATTAACAATGCAAAATTTGTGGTCGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450058 76 + 96509753 CTGTGGCTTGTTTG--------TTTAT-----TTTTTATAATAAAACTGTAATGAATGCTAAATTAACAATGCAAAATTTGTGGTCGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921018 76 - 16982598 CTGTGGCTTGTTTG--------TTTAT-----TTTTTATAATAAAACTGTAATGAATGCTAAATTAACAATGCAAAATTTGTGGTCGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723820 76 - 3785965 CTGTGGCTTGTTTG--------TTTAT-----TTTTTATAATAAAACTGTAATGAATGCTATATTAACAATGCAAAATTTGTGGTCGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302051 76 - 90373283 CTGTGGTTTGTTTG--------TTTAT-----TTTTTACAATAAAACTGTAATGAATGCTAAATTAACAATGCAAAATTTGTGGTCGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116637 76 - 179258 CTGTGGCTTGTTTG--------TTTAT-----TTTTTATAATAAAACTGTAATGAATGCTAAATTAACAATGCAAAATTTGTGGTCGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592138 72 - 5823884 CTGTGGC----TTG--------TTTAT-----TTTTTACAATAAAACTGTAATGAATGCTAAATTAACAATGCAAAATTTGAGGTTGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 73741 81 + 372756 CTGTGGCTTGTTTA--------GTTATTTAATTTTTTGCAATAAAACTGTAATCAATGCTAAATTAACAATGCAAAATGTGTAGTTGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16309311 81 + 16356641 CTGTGGCTTGTTTA--------GTTATTTAATTTTTCACAATAATACTGTAATGAATGCTAAATTAACAATGCAAAATGTGTAGTTGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1178342 81 + 1231380 CTATGGCTTGTTTA--------GTTATTTAATTTTTTACAATAAAACTGTAATAAATGCTAAATTAACAATGCAAAATGTGTAGTTGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710074 81 + 11732439 CTGTGGCTTGTTTA--------GTTATTTAATTTTTTACAATAAAACTGTAATGAATGCTAAATTAACAATGCACAATGTGTAGTTGTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56891019 80 + 57149010 CTGTAGCTTGTTTA--------TTTATTTAA-TTTTTACAATAAAACTGTAATGAATGCTAAATTAACAATGCAAAATAGGAGGTTGTT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1885721 80 - 2029793 CTGTAGCTTGTTTA--------TTTATTTGA-TTTTTACAATAAAACTGTAATGAATGCTAAATTAACAATGCAAAATAGGAGGTTGTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22873884 76 + 22939663 TTGTAGCTTGTTTA--------TTTA----A-TTTTTACAATAAAACTGTAATGAATGCTAAATTAATAATGCAAAACAAGGATTTGTA i otoGar3.GL873542 C 0 I 298 s canFam3.chr24 47631462 75 + 47698779 CTGTGGCTCATTTA--------TTAAA-----TTTTTACAATAAAACTATAATGAGTGCTAAATCAA-AACCCAAAATATATGGATGTT i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 270000 84 - 397369 CTGTGGCTTGGTTAGTGAGTTGTTTAT-----CTTTTGCAATAAAACTGTAACAAACGCTAAATTAATGATGTAGAGCACTTGGTTGCT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I a score=3539855.000000 s hg38.chr20_KI270870v1_alt 137792 243 + 183433 AGTACTATGAAGGTCGCACACTAAATGCTGAGGTGGAT-AAAAAGCATTT-TGC-CCCTGAGAATCCAGGAATTTGCCTATGATCATATAAGTGCAACACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATATTATAAGTGAATCGTGCTGCATTTGCAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAATGGTTTTCC--TTTCTAATGTGCTGTCAACTGAGCTTT s panTro5.chr20 66463887 243 + 66533130 AGTACTATGAAGGTCGCACACTAAATGCTGAGGTGGAT-AAAAAGCATTT-TGC-CCCTGAGAATCCAGGAATTTGCCTGTGATCATATAAGTGCAACACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATATTATAAGTGAATCGTGCTGCATTTGCAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAATGGTTTTCC--TTTCTAATGTGCTGTCAACTGAGCTTT i panTro5.chr20 C 0 I 1 s panPan2.chr20 62138935 243 + 62195757 AGTATTATGAAGGTCGCACACTAAATGCTGAGGTGGAT-AAAAAGCATTT-TGC-CCCTGAGAATCCAGGAATTTGCCTGTGATCATATAAGTGCAACACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATATTATAAGTGAATCGTGCTGCATTTGCAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAATGGTTTTCC--TTTCTAATGTGCTGTCAACTGAGCTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528006 243 - 578057 AGTACTACGAAGGTCGCACACTAAATGCTGAGGTGGAT-AAAAAGCATTT-TGC-CCCTGAGCATCCAGGAATTTGCCTGTGGTCATATAAGTGCACCACCTTCATGGATTTGGCAAGGGCCCTGCTGGCAGGGATATTATAAGTGAATCGTGCTGCATTTGCAAATGATGAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAATGGTTTTCC--TTTCTAATGTGCTGTCAACTGAGCTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050220 243 - 110113093 AGTACTATGAAGGTTGCACACTAAATGATGAGGTGGAT-AAAAAGCATTT-TGC-CCCTGAGAATCCAGGAATTTGCCTATGATCATATAAGTGCAACACCTTTATGGATTTGGCAAGGACCCTGCTGGCAGGGATATTATAAGTGAATTGTGCTGCATTTGCAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAATGGTTTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784079 243 - 92844088 AGTACTATGAAGGCCGCACACTAAATGCTGAGGTGCAGAAAAAAACATTT-TGC-CCCTGAGAATCCAGGAATTTG-ATATGATCATATAAGTGCAGCACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATGTTACAAGTGAATCGTGCTGCATTTGCAGATGACTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAACGGTTTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450134 243 + 96509753 AGTACTATGAAGGCCGCACGCTAAATGCTGAGGTGCAGAAAAAAACATTT-CGC-CCCTGAGAATCCAGGAATTTG-ATATGATCATATAAGTGCAGCACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATGTTACAAGTGAATCGTGCTGCATTTGCAGATGACTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAACGGTTTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921094 243 - 16982598 AGTACTATGAAGGCCGCACACTAAATGCTGAGGTGCAGAAAAAAACATTT-CAC-CCCTGAGAATCCAGGAATTTG-ATATGATCATATAAGTGCAGCACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATGTTACAAGTGAATCGTGCTGCATTTGCAGATGACTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAACGGTTTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3723896 243 - 3785965 AGTACTATGAAGGCCGCACACTAAATGCTGAGGTGCAGAAAAAAACATTT-CGC-CCCTGAGAATCCAGGAATTTG-ATATAATCATATAAGTGCAACACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATGTTACAAGTGAATCGTGCTGCATTTGCAGATGACTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAACAGTTTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302127 242 - 90373283 AGTACTATGAAGGCCGCACACTAAATGCTGAGGTGCAG-AAAAAACATTT-CGC-CCCTGAGAATCCAGGAATTTG-ATATGATCATATAAGTGCAACACCTTTATGGATTTGGCGAGGATCCTGCTGGCAGGGAGATTACAAGTGAATCGTGCTGCATTTGCAGATGACTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAATGGTTTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116713 243 - 179258 AGTACTATGAAGGCCGCACACTAAATGCTGAGGTGCAGAAAAAAACATTT-CGC-CCCTGAGAATCCAGGAATTTG-ATATGATCATATAAGTGCAACACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATGTTACAAGTGAATCGTGCTGCATTTGCAGATGACTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAA----AAACAGTTTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592210 242 - 5823884 AGTACTATGAAGGCCGCACACTAAATGCTGAGGTGTAG-AAAAAACATTT-TGC-CCCTGAGAATCTGGGAATTTG-CTATGATCATATAAGTGCAACACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATATTACAAGTGAATCGTGCTGCATTTGCAGATGACTAAAATCAAGATCAGCGTTTTTCAAATTAATCAGGAA----AAACGGTTTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 73822 247 + 372756 AGTACTATGAAGGCTGCATACTAAATGCTGAGGTGGGT-AAAAAGCATTT-TGC-CCCTGAGAATCCAGGAATTTGCCTATGATTATGTAAGTGCAACACCTTTACGGATTTGGCAAGGATCCTGCTGGCAGGGATATTATAAGTGAATTGTGCTGCATTTGCAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAAAAATAAATGGTCTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16309392 247 + 16356641 AGTACTATGAAGGCTGCATGCTAAATGCTGAGGTGCGT-AAAAAGCATTT-TGC-CCCTGAGAATCCAGGAATTTGCCTATGATTACATAAGTGCAGCACCTTTATGGATTTGGCAAGGATCCTGCTGGCAGGGATATTATAAGTGAATTGTGCTGCATTTGCAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAACTAGGAAAAATAAATGGTCTTCC--TTTCTAATGTGCTGTCAACTTAGCTTT i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1178423 247 + 1231380 AGTGCTATGAAGGCTGCATACTAAATGCTGAGGTGGGT-AAAAAGCATTT-TGC-CCCTGAGAATCCAGGAATTCGCCTATGATCATATAAGGGCAACACCTTTACGGATTTGGCAACGATCCTGCTGGCAGGGCTATTGTAAGTGAATTGTGCTGCGTTTGCAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAACCAGGAAAAATAAATGGTCTTCC--TTTCGAATGTGCTGTCAACTTAGCTTT i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2710155 242 + 11732439 AGTACTGTGAAGGCTGTGTACTAAATGCTGAGGCGGGC-AAAAAGCATTT-TGC-CCCTGAGAATCCAGGAATTTGCCTATGATTATATAAGTGCAACACCTTTACGGATTTGGCAAGGATCCTGCTGGCAGGGA-ATTATAAGTGAATTGTGCTGCATTTGCAAATGATCAGAATCAAGATCAGCATTTTTCAAATTAGCCAGGAAAAGTAAATGGT----C--TTTCTAATGTGTTGTCAACTTAGCTTT i aotNan1.NW_018500483v1 C 0 I 1 s micMur3.chr18 56891099 246 + 57149010 TGTATTACAAATGCTGCATACTAAATGCTGGAGTGCGT-AAAAAGTATTT-TTCCCCCTGAGAAGCCAGGAATTTGTCTGTGATCATATAAATGCAATGCTTTGATGGATTTAGCAAGCACCCTGCTGGCAGGGATTTTATAAGTGAATTGTGCTACATTTACAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAACTAGGAA----AAATGTTTTTCCTCTTTTTAATGTGCTGTCAACTTTGCTTT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1885801 246 - 2029793 TGTATTACGAATGCTGCATACTAAATGCTAGAGTGTGT-GAAAAGTATTT-TTCCCCCTGAGAAACCAGGAATTTGTCTGTGATCATATAAATGCAATGCTTTGATGGATTCGGCAAGCATCCTGCTGGCAGGGATATGATAAGTGAATTGTGTTACATTTGCAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAACTAGCAA----AAATGTTTTTCCTCTTTTTAATGTGCTGTCAACTTTGCTTC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22874258 220 + 22939663 AATATTCTGAATGCTGCATACTAAATGCTAGAGTGCAT-AGGAAGTGTTT-TTCTCCTGAAAAAACCAGGAATTCGCCTGTGATCATGTAAGTGTGA--------------------------TGCTGGCAGGGATATTGTAAGTGAATTGTACTGCATTTGCAAATGATTAAAATCAAGATCAGCATTTTTCAAATTAAGTGAGAA----AAATGTTTTTCCTTTCTCTCATGTTTCCTCAACTTTGCTTT i otoGar3.GL873542 I 298 I 285 s canFam3.chr24 47631537 244 + 47698779 GGTGTCATGGATGCAGCCCAATAAATGCGAGGACAGAT-GAAGAGTATTTATCC-TTCTGAGAAGCCAGGAATTTGCCTGTGATTGTATAAATGCAA-GCTGCTATGGATTTAGCAAGGATCCTGCT-GCAGGGATACGATAAGTGAATTGTGCTGCATTTGCAAATGATTAAAATCAAGATCAGCACTTTTTAAGTTAACTGGGAA----GAACGGTTTTCCTCCTCCTAGTGTGCTGTCAACTTTGCTTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270084 205 - 397369 GGTATGGAGAAGG-------CTAACTGCTGGGGTCAGT-AAAAAGTACTT-TCCCTCCTGAG--TGCAGAAATTTGCTAGAGATGATAGAAA-------------------------------TGCTGGCA-GGACGTTAAAAGCAAATTGTGCTGCATTTGCAAATGATTAAAATCAAGATCAGCATTTTTTAAATTAACATGGAA----AAACGGTTTTCCTGTTTCTAATGTGCTGTCAGTTATGCTTT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I a score=926869.000000 s hg38.chr20_KI270870v1_alt 138035 71 + 183433 -AAAAAAAAAC-------AAGAGTTCTGCAGCCGAGTGGAGACTGTGACTTTCAGA---AACACTTCAGCATTTGCAGGATA s panTro5.chr20 66464131 71 + 66533130 -AAAAAAAAAC-------AAGAGTTCTGCAGCCGAGTGGAGACTGTGACTTTCAGA---AACACTTCAGCATCTGCAGGATA i panTro5.chr20 I 1 C 0 s panPan2.chr20 62139178 71 + 62195757 -AAAAAAAAAC-------AAGAGTTCTGCAGCCGAGTGGAGACTGTGACTTTCAGA---AACACTTCAGCATCTGCAGGATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528249 71 - 578057 -AAAAAAAAAC-------AAGAGTTCTGCAGCCGAGTGGAGACTGTGACTTTCAGA---AACACTTCAGCATTTGCAGGATA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050463 63 - 110113093 -TAAAAAAAAC-------AAGAGTTCTGCAGCCAGGTGGAGACTGTGACTTTCAGA---AA--------CATTTGCAGGGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784322 69 - 92844088 --AAAAAAAAC-------AAGAGTTCTGCAGCCAAGTGGAGACT-CGACTTTGAGA---AACATTTCAGCATTTGCAGGATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450377 69 + 96509753 --AAAAAAAAC-------AAGAGTTCTGCAGCCAAGTGGAGACT-CGACTTTGAGA---AACATTTCAGCATTTGCAGGATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921337 69 - 16982598 --AAAAAAAAC-------AAGAGTTCTGCAGCCAAGTGGAGACT-CGACTTTGAGA---AACATTTCAGCATTTGCAGGATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724139 69 - 3785965 --AAAAAAAAC-------GAGAGTTCTGCAGCCAAGTGGAGACT-CGACTTTGAGA---AACATTTCAGCATTTGCAGGATA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302369 69 - 90373283 --AAAAAAAAC-------AAGAGTTCTGCAGCCAAGAGGAGACT-CGACTTTGAGA---AACATTTCAGCATTTGCAGGATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 116956 69 - 179258 --AAAAAAAAC-------GAGAGTTCTGCAACCAAGTGGAGACT-CGACTTTGAGA---AACATTTCAGCATTTGCAGGATA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592452 72 - 5823884 --AAAAAAAAC-------AAGAGTTCTGCAGCCAAGTGGAGCCT-CGACTTTGAGAAACAACACTTCAGCATTTGCAGGATA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74070 71 + 372756 -AAAAAAAAAA-------AAGAGTTCTGCAGTCAAGTGGAGACTGTGACTTTCAGA---AACACTTCAGCATTTGCAGGAGA i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16309640 78 + 16356641 -AAAAAAAAAAAAACCAGAAGAGTTCTGCAGTCAAGTGGAGACTGTGACTTTCAGA---AACGCTTCAGCATTTGCAGGAGA i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1178671 71 + 1231380 -AAAAAAAAAC-------AAGAGTTCTGCAGTCAAGTGGAGACTGTGACTTTCAGA---AACGCTTCAGCATTTGCAGGAGA i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2710398 71 + 11732439 -AAAAAAAAAC-------AAGAGTTCTGCAGTCAAGTGGAGACTGTGACTTTCAGA---AACACTTCAGCATTTGCAGGAGA i aotNan1.NW_018500483v1 I 1 C 0 s micMur3.chr18 56891345 68 + 57149010 --TAAAAAAAC-------AAGAGTTCTGAAGCCAAGTGGAGGTTGTGACTT--AGA---AACAGATCAACATTTGCAGGATA i micMur3.chr18 C 0 I 155 s proCoq1.NW_012150197v1 1886047 68 - 2029793 --TAAAAAAAC-------AAGAGTTCTGAAGCCAAGTGGAGATTGTGACTT--AGA---AACAGTTCAGCATTTGCAGGATA i proCoq1.NW_012150197v1 C 0 I 205 s otoGar3.GL873542 22874763 71 + 22939663 -aaacaaaaaa-------aAGAGTTCTGCAGCCAAGTGGAGATTGTGACTTACAGA---ACCAGTTCAGCATTTGTAGGATA i otoGar3.GL873542 I 285 C 0 s canFam3.chr24 47631781 67 + 47698779 --TTAAAAAAT-------AAGA-TTTTGCAGCCAAGTGGAGAATATGACTT--AGA---AGCAGGTCAGCATTTACAGGATG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270289 71 - 397369 ATAAAAACGAC-------AAGATTTCTGCAGCCCCGTGGAGGGGGTGATTCT-AGA---AGCAGTTGAGCGCATCTGGGAGG i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I a score=290654.000000 s hg38.chr20_KI270870v1_alt 138106 27 + 183433 GAGGAAGGTCCTA----GAGGCTCCATGGC-A---- s panTro5.chr20 66464202 27 + 66533130 GAGGAAGGTCCTA----GTGGCTCCATGGC-A---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139249 27 + 62195757 GAGGAAGGTCCTA----GTGGCTCCATGGC-A---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528320 27 - 578057 GAGGAAGGTCCTA----GCGGCTCCATGGC-A---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050526 27 - 110113093 GATGAAGTTCCTA----ACGGCTCCATGGC-A---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784391 27 - 92844088 GACGAAGTTCCTA----ATGGCCCCATGGC-A---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450446 27 + 96509753 GACGAAGTTCCTA----ATGGCCCCATGGC-A---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921406 27 - 16982598 GACGAAGTTCCTA----ATGGCCCCATGGC-A---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724208 27 - 3785965 GACGAAGTTCCTA----ATGGCCCCATGGC-A---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302438 27 - 90373283 GACGAAGTTCCTG----ATGGCCCCATGGC-A---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117025 27 - 179258 GACGAAGTTCCTA----ATGGCCCCATGGC-A---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592524 27 - 5823884 GACGAAGTTCCTA----GTGGCTCCACGGC-A---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74141 27 + 372756 GATGAAGTTCCTA----ATGGTTCCATGGC-A---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16309718 27 + 16356641 GATGAAGTTCCTG----GTGGTTCCATGGC-A---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1178742 27 + 1231380 GATGAAGTTCCTA----GTGGTTCCATGGC-A---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710469 19 + 11732439 GATGAAGCTCCTA------------ATGGC-A---- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22874834 28 + 22939663 GATGAAGTTCCTA----ATTGCTCCATGGCAA---- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47631848 27 + 47698779 GATGAAGTTCCTA----CTGGCTCCACGGC-A---- i canFam3.chr24 C 0 I 38 s dasNov3.JH569290 270360 35 - 397369 GATGGTGTTCCTGACGGACGGCTCTGCGGC-TAGCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1886115 205 - 2029793 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891413 155 + 57149010 I a score=190048.000000 s hg38.chr20_KI270870v1_alt 138133 21 + 183433 GAGGGAACCTGACTACTGAAC s panTro5.chr20 66464229 21 + 66533130 GAGGGAGCCTGACTACTGAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139276 21 + 62195757 GAGGGAACCTGACTACTGAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528347 21 - 578057 GAGGGAACCTGACTACTGAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050553 21 - 110113093 GAGGGACACGGACTACGGAAC i nomLeu3.chr13 C 0 I 1 s rheMac8.chr10 92784418 21 - 92844088 GAGGGAACCTGACCACTTAAC i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96450473 21 + 96509753 GAGGGAACCTGACCACTTAAC i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16921433 21 - 16982598 GAGGGAACCTGACCACTTAAC i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3724235 21 - 3785965 GAGGGAACCTGACCACTTAAC i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90302465 21 - 90373283 GAGGGAACCTGACCACTTAAC i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 117052 21 - 179258 GAGGGAACCTGACCACTTAAC i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5592551 21 - 5823884 GAGGGAACCTGACCACATAAC i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chrUn_GL286459 74168 21 + 372756 GAGGGAACCTGCCCACTTGAC i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16309745 21 + 16356641 GAGGGAACCTGCCCACTTGCC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1178769 21 + 1231380 GAGGGAACCTGCCCACTTAAC i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2710488 21 + 11732439 GAGGGAACCCGCCCGCTTAAC i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22874862 21 + 22939663 GGGGGGGGGCACCCACTTGGT i otoGar3.GL873542 C 0 I 1 s dasNov3.JH569290 270395 19 - 397369 --GGGGCAGCACCTGCGCAGC i dasNov3.JH569290 C 0 I 1 e proCoq1.NW_012150197v1 1886115 205 - 2029793 I e canFam3.chr24 47631875 38 + 47698779 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891413 155 + 57149010 I a score=1210836.000000 s hg38.chr20_KI270870v1_alt 138154 116 + 183433 CCTCCGTTTTAC-AGGGTT--CCT--TCCCA-GCCATAAACTTTAACTGCACTTGTAATTGCCTAGCATATTTAAACAGATGCATATCAAAGCAGAAACTGGAATGGATGTGTCAGGTCATG s panTro5.chr20 66464250 116 + 66533130 CCTCCGTTTTAC-AGGGTT--CCT--TCCCA-GCCATAAACTTTAACTGCACTTGTAATTGCCTAGCGTCTTTAAACAGATGCATATCAAAGCAGAAACTGGAATGGATGCGTCAGGTCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139297 116 + 62195757 CCTCCGTTTTAC-AGGGTT--CCT--TCCCA-GCCATAAACTTTAACTGCACTTGTAATTGCCTAGCGTCTTTAAACAGATGCATATCAAAGCAGAAACTGGAATGGATGCGTCAGGTCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528368 116 - 578057 CCTCCGTTTTAC-AGGGTT--CCT--TCCCA-GCCATAAACTTTAACTGCACTTGTAATTGCCTAGCATCTTTAAACAGATGCATATCAAAGCAGAAACTTGAACGGATGCGTCAGGTCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050575 116 - 110113093 CCTCCGTTTTAC-AGGGTT--CCT--TCCCA-GCCATAAACTTTAACCGCACTTATAATTGCCCAGCATCTTTAAACAGATGCGTATCAAAGCAGAAACCTGAATGGGTGCGTCAGGTCATG i nomLeu3.chr13 I 1 C 0 s rheMac8.chr10 92784440 118 - 92844088 CCTCCGTTTTAC-GGGGTTTGCCT--CCCCA-GCCATAAACTTTAACTGCATTTATAATTGCCTAACGTCTTTAAACAGATGCAGATCGAAGCAGAAACTCGAATGGATGTGTCAGGTCTTG i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96450495 118 + 96509753 CCTCCGTTTTAC-GGGGTTTGCCT--CCCCA-GCCATAAACTTTAACTGCATTTATAATTGCCTAACGTCTTTAAACAGATGCAGATCGAAGCAGAAACTCGAATGGATGTGTCAGGTCTTG i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16921455 118 - 16982598 CCTCCGTTTTAC-GGGGTTTGCCT--CCCCA-GCCATAAACTTTAACTGCATTTATAATTGCCTAACGTCTTTAAACAGATGCAGATCGAAGCAGAAACTCGAATGGATGTGTCAGGTCTTG i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3724257 119 - 3785965 CCTCCGTTTTACAGGGGTTTGCCT--CCCCA-GCCATAAACTTTAACTACATTTATAATTGCCTAACGTCTTTAAACAGATGCAGATCGAAGCAGAAACTCGAATGGATGTGTCAGGTCTTG i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90302487 119 - 90373283 TCTCCGTTTTACAGGGGTTTGCCT--CCCCA-GCCATAAACTTTAACTGCATTGATAATTGCCTAACGTCTTTAAACAGATGCAGATCGAAGCAGAAACTCGAATGGATGTGTCAGGTCTTG i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 117074 119 - 179258 CCTCCGTTTTACAGGGATTTGCCT--CCCCA-GCCATAAACTTTAACTGCATTTATAATTGCCTAACGTCTTTAAACAGATGCAGATCGAAGCAGAAACTCGAATGGATGTGTCAGGTCTTG i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5592573 119 - 5823884 CCTCCGTTTTACAGGGGTTTGCCT--CCCCA-GCCATAAACTTTTACTGCATTTATAATTGCCCAACGTCTTTAAACAGATGCAGATCGAAGCAGAAACTCGAATGGATGTGTCAGGTCTTG i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chrUn_GL286459 74190 119 + 372756 CGCCCATTTTAC-AGGGTCTGCGTACCCCCA-GCCATAAACTTTAACTGCATTTGTAATTGCCTAGCATCTTTAAAC-GATGCATATCAAAGCAGAAACTTTAATAGATGTGTCAGGTCATG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16309767 120 + 16356641 TGTCCATTTTAC-AGGGTTTCCATACCCCCA-GCCGTGAACTTTAACTGCATTTATAATTGCCTAGCGTCTTTAAACAGATGCATATCAAAGCAGAAACTTTAATAGATGTGTCAGGTCATG i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1178791 120 + 1231380 CGTCCATTTTAT-AGGGTTTCCATACCCCCA-GCCATAAACTTTAACTGCATTTGTAATTGCCTCACGTCTTTAAACAGATGCACATCAAAGCAGAAACTTTAATAGATGTGTCAGGTCATG i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2710510 119 + 11732439 CGTCCATTTTAC-GGCGTTTCCAAACTGCCA-GCCGTAAACTTTAACTGCATTTGTAATTGCC-AGCATCTTTAAACAGATGCATATCAAAGCAGAAACTTTAATGTATGTGTCAGGTCATG i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22874884 104 + 22939663 CCTCCATTTTAT-AGGGCC--TCC--CCCCT-GCCATAAG-GTTAGCTGTATTTATAATT----AGCATCGTTAAACATGTGCATACTGAAGCAAAGACTT-------TACACCAGGTCCTG i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47631913 117 + 47698779 CCTCCGTTTTAT-AGGGCCT-CCT--CCGCC-CCCATAAACTTTCACTGTATTGATAATTGCCTGTCATCTTGAAACAAGTGCAGACCGCAGCAGAAGCTTTAATCGGTGCACCAGGTCCTG i canFam3.chr24 I 38 C 0 s dasNov3.JH569290 270415 98 - 397369 CCTCCGCGCCGT-GGG----------CCCCACGCCAGAAGCTTTCCCTGCTTTAGCAGCTGCCTGGCCTCTCTGCA---------GCCACAGCAGGGACTGGAGGGGA----CCTGGCCTTG i dasNov3.JH569290 I 1 C 0 e proCoq1.NW_012150197v1 1886115 205 - 2029793 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891413 155 + 57149010 I a score=474152.000000 s hg38.chr20_KI270870v1_alt 138270 37 + 183433 CTGAGGGATGGGATTTCGTCAGCATGCATGAGCTGTG s panTro5.chr20 66464366 37 + 66533130 CTGAGGGGTGGGATTTCGTCAGCATGCATGAGCTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139413 37 + 62195757 CTGAGGGATGGGATTTCGTCAGCATGCATGAGCTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528484 37 - 578057 CTGAGGGATGGGATTTCGTCAGCATGCATGAGCTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050691 37 - 110113093 CTGAGGGATGGGATTTTGTCGGCGTGTGTGAGCTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784558 37 - 92844088 CTGAGGGACGGGATTTTGTCAGCGTGCGTGAGCTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450613 37 + 96509753 CTGAGGGACGGGATTTTGTCAGCGTGCGTGAGCTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921573 37 - 16982598 CTGAGGGACGGGATTTTGTCAGCGTGTGTGAGCTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724376 37 - 3785965 CTGAGGGACGGGATTTTGTCAGCGTGCGTGAGCTGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302606 37 - 90373283 CTGAGGGATGGGATTTTGTCAGCGTGCGTGAGCTGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117193 37 - 179258 CTGAGGGATGGGATTTTGTCAGCGTGCGTGAGCTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592692 37 - 5823884 CTGAGGGATGGGATGTTGTCAGCGTGCATGAGCTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74309 37 + 372756 CTGAAGGATGGGATTTTGTCAGCGTGTGTGAGCTGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16309887 37 + 16356641 CTGAGGGATGGGATTTTGTCAGCATGCGTGAGCTGCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1178911 37 + 1231380 CTGAGGGATGGGATTTTGTCAGCATGTGTGAGCTGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710629 37 + 11732439 CTGAGGGATGGGATTTTGTCAGCATGTGTGAGCTGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56891568 37 + 57149010 CTGAGGCATGGGATTTCATTAGCATGCATGAACTGTG i micMur3.chr18 I 155 I 26 s otoGar3.GL873542 22874988 36 + 22939663 CTGAGG-ATGGGATATCATCAACATGCATGAACCATG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632030 37 + 47698779 TTGCGTGACGGGATTTCGTGAGCACGTGCTAGCTGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270513 30 - 397369 CTGAACAGCGACGTCTT---AGCAGGCGCTGAC---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1886115 205 - 2029793 I e mm10.chr2 181818299 628 + 182113224 I a score=248191.000000 s hg38.chr20_KI270870v1_alt 138307 35 + 183433 ATTTGGGGAGCCT----G-GTGGAACAGGAG-TCCTTTTTA s panTro5.chr20 66464403 34 + 66533130 ATTTGGGGAGCCT----G-GTGGAGC-GGAG-TCCTTTTTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139450 35 + 62195757 ATTTGGGGAGCCT----G-GTGGAGCAGGAG-TCCTTTTTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528521 35 - 578057 ATTTGGAGAGCCT----G-GTGGAGCAAGAG-TCCTTTTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050728 35 - 110113093 ATTTGGAGAGCCT----G-GCGGAGCAAGAG-TCCTTTTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784595 33 - 92844088 ATCGGGAGAGCCT----G-GTGGAGCA--AG-TCCTTTTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450650 33 + 96509753 ATCGGGAGAGCCT----G-GTGGAGCA--AG-TCCTTTTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921610 33 - 16982598 ATCGGGAGAGCCT----G-GTGGAGCA--AG-TCCTTTTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724413 33 - 3785965 ATCGGGAGAGCCT----G-GTGGAGCA--AG-TCCTTTTTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302643 33 - 90373283 ATCGGGAGAGCCT----G-GTGGAGCA--AG-TCCTTTTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117230 33 - 179258 ATCGGGAGAGCCT----G-GTGGAGCA--AG-TCCTTTTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592729 33 - 5823884 ATCTGGAGAGCCT----G-GTGGAGCA--AG-TCCTTTTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74346 40 + 372756 ATTTGGAGAGCCTGCTGG-ATGGAGCAAGAGTTCCCTTTTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16309924 36 + 16356641 ATTTGGAGAGCCT----G-GTGGAGCAAGAGTTCTCTTTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1178948 36 + 1231380 ATTTGGAGAGCCT----G-GCGGAACAAGAGTTCCCTTTTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710666 36 + 11732439 ATTTGGAGAGCCT----G-GTGGAGCAAGAGTTCCCTTTTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22875024 10 + 22939663 TTTTGGAGAC------------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632067 35 + 47698779 ATGTGGAGGG-CT----G-GTGGCAGAAGAGATCCCTTTTA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270543 32 - 397369 -TTTGAAGGGGCT----GTGGGGAGGCGGGG-TCTTCT--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1886115 205 - 2029793 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891605 26 + 57149010 I a score=148869.000000 s hg38.chr20_KI270870v1_alt 138342 13 + 183433 TGATATCTCCTGC s panTro5.chr20 66464437 13 + 66533130 TGATATCTCCTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139485 13 + 62195757 TGATATCTCCTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528556 13 - 578057 TGACATCTCCTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050763 13 - 110113093 TGACATCTCCTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784628 13 - 92844088 TGACATCTCATGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450683 13 + 96509753 TGACATCTCATGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921643 13 - 16982598 TGACATCTCATGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724446 13 - 3785965 TGACATCTCATGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302676 13 - 90373283 TGACATCTCATGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117263 13 - 179258 TGACATCTCATGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592762 13 - 5823884 TGACGTCTCAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74386 13 + 372756 TGACATCTCACGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16309960 13 + 16356641 TGACATCTCACGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1178984 13 + 1231380 TGACATCTCATGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710702 13 + 11732439 TGACATCTCATGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1886320 13 - 2029793 TGACATCTCATGT i proCoq1.NW_012150197v1 I 205 C 0 s otoGar3.GL873542 22875034 8 + 22939663 TGACATCT----- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632102 13 + 47698779 GGACATCTTGTGT i canFam3.chr24 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891605 26 + 57149010 I e dasNov3.JH569290 270575 0 - 397369 C a score=1112764.000000 s hg38.chr20_KI270870v1_alt 138355 78 + 183433 CTGCGCTATTTAAAATTAAGTCACATCAGGCGCTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA s panTro5.chr20 66464450 77 + 66533130 CTGCGCTATTTAAAATTAAGTCACATCAGGCGCTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139498 77 + 62195757 CTGCGCTATTTAAAATTAAGTCACATCAGGCGCTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528569 78 - 578057 CTGCGCTATTTAAAATTGAGTCACATCAGGCGCTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050776 78 - 110113093 TGGCACTATTTAAAATTAAGTCACATCAGGCACTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784641 78 - 92844088 CTGCACTATTTAAAACTGAGTCACATCAGGCACTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450696 78 + 96509753 CTGCACTATTTAAAACTGAGTCACATCAGGCACTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921656 78 - 16982598 CTGCACTATTTAAAACTGAGTCACATCAGGCACTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724459 78 - 3785965 CTGCACTATTTAAAACTGAGTCACATCAGGCACTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302689 78 - 90373283 CTGCACTATTTAAAACTGAGTCACATCAGGCACTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117276 78 - 179258 CTGCACTATTTAAAACTGAGTCACATCAGGCACTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592775 78 - 5823884 CTGCACTATTTAAAACTGAGTCACAACAGGCACTTGGTGGTAAATCCC-TTT-GCCACAGCTTTATAACTGGTCATAAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74399 77 + 372756 CTGCACTATTCAAAATTAAGTCACATCAGGCACTTTGTGGTAAATCCT-TTT-GCCACAGCTTTATAACTGGTCGTAAG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16309973 77 + 16356641 CTGCACTATTCAAAATTAAGTCACATCAGGCACTTTGTGGTAAATCCT-TTT-GCCACAGCTTTATAACTGGTTGTAAA- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1178997 77 + 1231380 CTGCACTATTCAAAATTAAGTCACATCAGGCACTTTGTGGCAAATCCT-TTT-GCCACAGCTTTGTAACTGGTCGTAAG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710715 65 + 11732439 CTGCACTATTCAAAATCAAGTCACATCAGGCACTTTGTGGTAAATC--------------CTTCATAACTGGTGGTAAG- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56891631 78 + 57149010 CTGCACCATTTAAAATTAAGTCACGTC-GGCACGTAGTGGTAAATCCCTTTT-GCCACAGCTTTATAACTGGTCATAAAA i micMur3.chr18 I 26 I 1443 s proCoq1.NW_012150197v1 1886333 78 - 2029793 CTGCACCATTTAAAACTAAGTCACGTC-AGCACTTAGCGGTAAATCCCTTTT-GCCACAGCTTTATAAGTGGTCATAAAA i proCoq1.NW_012150197v1 C 0 I 399 s otoGar3.GL873542 22875042 78 + 22939663 CTGCACCATTTAAGGTTAAATCATGTT-GGCACTTTGTGGTAAATCTTTTTT-GCCACAGCTTTATAATTGGCTATAAAA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632115 78 + 47698779 CCGCGCCGTTTGAGATTAAGTCACATC-AGCACATTGTGGTAAATCCC-TTCGGCCAAAACTGAATAACTGGCCATAAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270575 78 - 397369 CTGCCCTGTTTGAGATGAAGTTGTGTC-AGCATTTTGTGGTAAATTCCTTTT-GCCGCAATTTTACAACTGGCCATAAAA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I a score=25004.000000 s hg38.chr20_KI270870v1_alt 138433 7 + 183433 GTCTTGC s gorGor5.CYUI01015848v1 528647 7 - 578057 GTCTTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050854 7 - 110113093 GTCTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784719 7 - 92844088 GTCCTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450774 7 + 96509753 GTCCTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921734 7 - 16982598 GTCCTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724537 7 - 3785965 GTCCTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302767 7 - 90373283 GTCCTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117354 7 - 179258 GTCCTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592853 7 - 5823884 GTCCTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74476 6 + 372756 -TCTTGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310050 6 + 16356641 -TCTTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179074 6 + 1231380 -TCTTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710780 5 + 11732439 -TCTT-C i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22875120 7 + 22939663 GTCTGGT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632193 5 + 47698779 -TCCAT- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270653 6 - 397369 GTCTTC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1886411 399 - 2029793 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e panPan2.chr20 62139575 0 + 62195757 C e panTro5.chr20 66464527 0 + 66533130 C a score=26399.000000 s hg38.chr20_KI270870v1_alt 138440 2 + 183433 GG s gorGor5.CYUI01015848v1 528654 2 - 578057 GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050861 2 - 110113093 GG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784726 2 - 92844088 GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450781 2 + 96509753 GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921741 2 - 16982598 GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724544 2 - 3785965 GG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302774 2 - 90373283 GG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117361 2 - 179258 GG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592860 2 - 5823884 GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74482 2 + 372756 AG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310056 2 + 16356641 GG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179080 2 + 1231380 GG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710785 2 + 11732439 GG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1886810 2 - 2029793 GG i proCoq1.NW_012150197v1 I 399 C 0 s otoGar3.GL873542 22875127 2 + 22939663 Gg i otoGar3.GL873542 C 0 I 421 s canFam3.chr24 47632198 2 + 47698779 GG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270659 2 - 397369 AG i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e panPan2.chr20 62139575 0 + 62195757 C e panTro5.chr20 66464527 0 + 66533130 C a score=95826.000000 s hg38.chr20_KI270870v1_alt 138442 8 + 183433 AGGTTCCA s panTro5.chr20 66464527 8 + 66533130 AGGTTCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139575 8 + 62195757 AGGTTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528656 8 - 578057 AGGTTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050863 8 - 110113093 AGGTTCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784728 8 - 92844088 AGGCGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450783 8 + 96509753 AGGCGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921743 8 - 16982598 AGGCGCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724546 8 - 3785965 AGGCGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302776 8 - 90373283 AGGCGCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117363 8 - 179258 AGGCGCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592862 8 - 5823884 AGGTGCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74484 8 + 372756 AGGTTCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310058 8 + 16356641 AGGTTCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179082 8 + 1231380 AGGTTCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710787 8 + 11732439 AGGTTCCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1886812 8 - 2029793 AGGTTCCA i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47632200 8 + 47698779 ATGTTCCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270661 8 - 397369 GGATTCCA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e otoGar3.GL873542 22875129 421 + 22939663 I a score=124824.000000 s hg38.chr20_KI270870v1_alt 138450 12 + 183433 GCATGGGAGTCA s panTro5.chr20 66464535 12 + 66533130 GCATGGGAGTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139583 12 + 62195757 GCATGGGAGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528664 12 - 578057 GCATGGGAGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050871 12 - 110113093 GTGTGGGAGTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784736 12 - 92844088 CCATGGGAGTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450791 12 + 96509753 CCATGGGAGTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921751 12 - 16982598 CCATGGGAGTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724554 12 - 3785965 CCATGGGAGTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302784 8 - 90373283 CCATGGGA---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117371 12 - 179258 CCATGGGAGTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592870 12 - 5823884 CCATGGGAGTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74492 12 + 372756 TCATGGGAGTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310066 12 + 16356641 TCATGGGAGTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179090 12 + 1231380 TCATGGGAGTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710795 12 + 11732439 TCATGGGAGCCC i aotNan1.NW_018500483v1 C 0 I 81 s proCoq1.NW_012150197v1 1886820 12 - 2029793 GCATGGGAGTCA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22875550 12 + 22939663 gtgtgtgtgtCA i otoGar3.GL873542 I 421 C 0 s canFam3.chr24 47632208 12 + 47698779 GCGTGAGGGTCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270669 11 - 397369 GCACGTGC-TCA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I a score=365824.000000 s hg38.chr20_KI270870v1_alt 138462 44 + 183433 AGAGGTGAATGCTCCCCTTGCCCTGCCCACTGTCCCTGGAGGGG s panTro5.chr20 66464547 44 + 66533130 AGAGGTGAATGCTCCGCTTGCCCTGCCCACTGTCCCTGGAGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139595 44 + 62195757 AGAGGTGAATGCTCCGCTTGCCCTGCCCACTGTCCCTGGAGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528676 44 - 578057 AGAGGTGAATGCTCCCCTTGCCCTGCCCACTGTCCCTGGAGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050883 44 - 110113093 AGAGGTGAATGCTCCCCCTGCCCTGCCCATTGTCCCTGGAGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784748 42 - 92844088 AGAGGCGAAAGT--CCCCTGCCCTGCCCATTGTCCCTAGAGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450803 42 + 96509753 AGAGGCGAAAGT--CCCCTGCCCTGCCCATTGTCCCTAGAGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921763 42 - 16982598 AGAGGCGAATGT--CCCCTGCCCTGCCCATTGTCCCTAGAGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724566 42 - 3785965 AGAGGCGAATGT--CCCCTGCCCTGCCCATTGTCCCTAGAGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302792 32 - 90373283 ----------GT--CCCCTGCCCTGCCCATTGTCCCTAGAGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117383 42 - 179258 AGAGGCGAATGT--CCCCTGCCCTGCCCATTGTCCCTAGAGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592882 43 - 5823884 AGAGGCGAATGT-CCCCCTGCCCTGCCCATTGTCCCCAGAGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74504 43 + 372756 AGAAATGAATGCTCCCCCTGCCCTGCCCACTATCCCTACAGGG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310078 43 + 16356641 AGAAATGAAGGCTCCCCCCGCCCTGCCCATTGTCCCTGGAGGG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179102 43 + 1231380 AGAAATGAATGCTCCCCGTGCCCTGCCCATTGTCCCTAGAGGG- i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1886832 44 - 2029793 GGAGGTGACTGCTTCCTCCACCCCACCCATTGTCCCTGGAGGGG i proCoq1.NW_012150197v1 C 0 I 232 s otoGar3.GL873542 22875562 44 + 22939663 GGAGCTGAATGCTTCTTCTGCCTTACCCATTGCCCTTGGAGGGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632220 33 + 47698779 GGAGCTG-------CTCAAG----GCCCATCGCCTGTGCAGGGT i canFam3.chr24 C 0 I 5 s dasNov3.JH569290 270680 40 - 397369 -CAAGCCAGCTACACCCCTGCCTT-CTGCTTGCCCCGAGAGG-- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e aotNan1.NW_018500483v1 2710807 81 + 11732439 I a score=381327.000000 s hg38.chr20_KI270870v1_alt 138506 9 + 183433 A-----------------------------------------------------CTTCTGGT s panTro5.chr20 66464591 62 + 66533130 AGCCCACGCTGCCGCTGGCCACACAGACACCCGACAAATGAAACGCATCTCTGGCTTCTGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139639 61 + 62195757 G-CCCACGCTGCCGCTGGCCACACAGACACCCGACAAATGAAACGCATCTCTGGCTTCTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528720 61 - 578057 AGCCCACGCTGCC-CTGGCCACACAGACACCCGGCAAATGAAACGCACGTCTGGCTCCTGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050927 62 - 110113093 AGCCCACGCTGCCCCTGGCCACACAGACACCCGACAAATGAAACGCACCTCTGGCTCCTGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784790 62 - 92844088 AGCCCACGCTGCCCCTGGCCACACAGACACCCGACAAATGAAATGCACCTCTGGTTCCTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450845 61 + 96509753 AGCCCACGCTGCCCCTGGCCACACAGACACCCGACAAATGAAATGCACCTCTGGTTCCT-GT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921805 62 - 16982598 AGCCCGCGCTGCCCCTGGCCACACAGACACCCGACAAATGAAATGCACCTCTGGTTCCTGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724608 62 - 3785965 AGCCCACGCTGCCCCTGGCCACACAGACACCCGACACATGAAATGCACCTCTGGTTCCTGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302824 62 - 90373283 AGCCCACGCTGCCCCTGGCCACACAGACACCCGGCAAATGAAGTGCACCTCTGGTTCCTGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117425 62 - 179258 AGCCCACGCTGCCCCTGGCCACACAGACACCTGACAAATGAAATGCACCTCTGGTTCCTGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592925 61 - 5823884 AGCCCACACT-TCCCTGGCCACACAGACACCCGACAAATGAAATGCACCTCTGGTTCCTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74547 62 + 372756 AGCCCATGCTGCCCCTGGCCACACAGACACCCAACAAATGAAATGCACCTCTGGTTCCTGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310121 62 + 16356641 AGCCCACGCTGCCCCTGGCCACACAGACACCCAACAAATGAAATGCAGCTCTGGTTCCTGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179145 62 + 1231380 AGCCCACGCTGCCCCGGGCCACACAGACACCCAACAAGTGAAATGCACCTCTGGTTCCTGGT i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22875606 12 + 22939663 -GCCCACCCTGCC------------------------------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632258 9 + 47698779 -ACCCCCACT---------------------------------------------------- i canFam3.chr24 I 5 C 0 s dasNov3.JH569290 270720 8 - 397369 --CCCACACT---------------------------------------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1886876 232 - 2029793 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e aotNan1.NW_018500483v1 2710807 81 + 11732439 I a score=504652.000000 s hg38.chr20_KI270870v1_alt 138515 52 + 183433 CCTGGCCATGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CCCCCCAACAC s panTro5.chr20 66464653 52 + 66533130 CCTGGCCATGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CCCCCCAACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139700 53 + 62195757 CCTGGCCATGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTGCCCCCCCAACAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528781 52 - 578057 CCTGGCCATGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CCCCCCAACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110050989 52 - 110113093 CCTGGCCATGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CCCCCCAACAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784852 52 - 92844088 CCTGGCCGTGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CGCCCCAATAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450906 52 + 96509753 CCTGGCCGTGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CCCCCCAATAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921867 52 - 16982598 CCTGGCCGTGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CCCCCCAATAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724670 52 - 3785965 CCTGGCCGTGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CCCCCCAATAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302886 51 - 90373283 CCTGGCCGTGT-T--------------------TCTCATGTCACT-G-------CACACGCG----GCTTCTG-CCCCCCATCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117487 52 - 179258 CCTGGCCGTGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CCCCCCAATAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5592986 52 - 5823884 CCTGGCCATGT-T--------------------TCTCCTGTCACTGG-------CACACATG----GCTTCTG-CCCCCCAATAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74609 52 + 372756 CCTGGCCATGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CAGCCCAACAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310183 52 + 16356641 CCTGGCCATGC-T--------------------TCTCATGTCACTGG-------CACACATG----GCTTCTG-CAGCCCAGCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179207 52 + 1231380 CCTGGCCATGT-T--------------------TCTCATGTCACTGG-------CACACACG----GCTTCTG-CAGCCCAGCAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710888 51 + 11732439 CCCGGCCATGT-T--------------------TCTCATGTCACTGG-------CACACAC-----GCTTCTG-CAGCCCAACAC i aotNan1.NW_018500483v1 I 81 C 0 s otoGar3.GL873542 22875618 78 + 22939663 CCTGGCCACAC-TGACACCTGAAATGAAAGGCACCTCTGGTCCCTGGTCCTGGCCACATTTC----TCATATG-TCCCCC-TCAA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632267 53 + 47698779 GCTGTCCCCAC-C--------------------ACCCCGGAGTCCGA-------CAGAAGAGACGCGCCTCTG-CCCTTGGG--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 270728 50 - 397369 CCAGGCCACGTGT--------------------CCTGAGAGGGCAGG-------CA---GCT----GCCCCGG-CCTCCCAACAC i dasNov3.JH569290 C 0 I 967 e proCoq1.NW_012150197v1 1886876 232 - 2029793 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I a score=1312055.000000 s hg38.chr20_KI270870v1_alt 138567 149 + 183433 GTGATAGG---AAACACTAGCTCACCCAAGAAGCACAGAGGCCTCACCAGCTCAGTGCCTGCCCCC--ACCGCCCCA-GCACCTCTC-AACATGAT-GTC-CCTGACAGCTTGAAAGTCTCCACACCAGG-----TTTTGTGAGAAAGAGAA------------CATACCTGAAA s panTro5.chr20 66464705 149 + 66533130 GTGATAGG---AAACACTAGCTCACCCAAGAAGCACAGAGGCCTCACCCGCTCAGTGCCTGCCCCC--ACCGCCCCA-GCACCTCTC-AACATGAT-GTC-CCTGACGGCTTGAAAGTCTCCACACCAGG-----TTTTGTGAGAAAGAGAA------------CATACCTGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139753 149 + 62195757 GTGATAGG---AAACACTAGCTCATCCAAGAAGCACAGAGGCCTCACCAGCTCAGTGCCTGCCCCC--ACCGCCCCA-GCACCTCTC-AACATGAT-GTC-CCTGACGGCTTGAACGTCTCCACACCAGG-----TTTTGTGAGAAAGAGAA------------CATACCTGAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528833 149 - 578057 GCGATAGG---AAACACTAGCTCACCCAAGAAGCACAGAGGCCTCACCAGCTCAGTGCCTGGCCCC--CCCGCCCCA-GCACCTCTC-AACATGAT-GTC-CCTGACGGCTTGAAAGTCTCCACACCAGG-----TTTTGTGAGAAAGAGAA------------CATACCTGAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110051041 149 - 110113093 GTGATAGG---AAACACTAGCTCACCCAAGAAGCACAGAGGCCTCACCAGCTCAGTGCCCGCTCCC--CTCGCCCCA-GCACCTTTC-AACGTGAT-GCC-CCTGACGGCTTGAAAGTCTCCACACCAGG-----TGTTGTGAGAAAGCGAA------------CATACCTGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92784904 149 - 92844088 GTGACAGG---AAACACTAGCTCACCCAAGAAGCACAGAGGCCTCACCAGCTCAGTGCCCGCACCC---CTGCCCCA-GCACGTTTCAAACATGAC-GTC-CCTGACGGCTTGAAAGTCTCCACACATGG-----TGTTGTGAGAAAGAGAA------------CATACCTGAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96450958 149 + 96509753 GTGACAGG---AAACACTAGCTCACCCAAGAAGCACAGAGGCCTCACCAGCTCAGTGCCCGCACCC---CTGCCCCA-GCACGTTTCAAACATGAC-GTC-CCTGACGGCTTGAAAGTCTCCACACGTGG-----TGTTGTGAGAAAGAGAA------------CATACCTGAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16921919 149 - 16982598 GTGACAGG---AAACACTAGCTCACCCAAGAAGCACAGAGGCCTCACCAGCTCAGTGCCCGCACCC---CTGCCCCA-GCACGTTTCAAACATGAC-GTC-CCTGACGGCTTGAAAGTCTCCACACATGG-----TGTTGTGAGAAAGAGAA------------CATACCTGAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724722 149 - 3785965 GTGACAGG---AAACACTAGCTCACCCAAGAAGCACAGAGGCCTCACCAGCTCAGTGCCCGCACCC---CTGCCCCA-GCACGTTTCAAACATGAC-GTC-CCTGACGGCTTGGAAGTCTCCACACATGG-----TGTTGTGAGAAAGAGAA------------CATACCTGAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90302937 149 - 90373283 GTGACAGG---AAACGCTAGCCCACCCAAGAAGCACAGAGGCCTCACCAGCTCAGTGCCCGCGCCC---CTGCCCCA-GCACGTTTCAAACATGAC-GTC-CCTGACGGCTTGAAAGTCTCCACACATGG-----TGTTGTGAGAAAGAGAA------------CGTACCTGAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117539 149 - 179258 GTGACAGG---AAACACTAGCTCACCCAAGCAGCACAGAGGCCTCACCAGCTCAGTGCCCGCACCC---CTGCCCCA-GCACGTTTCAAACATGAC-GTC-CCTGACGGCTTGAAAGTCTCCACACATGG-----TGTTGTGAGAAAGAGAA------------CATACCTGAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5593038 148 - 5823884 GTGACAGG---AAACACTAGCTCACCCGAGACGCACAGAGGCCTCACCGGCTCAGTGCCCGCACCC---CTGCCCCA-GCACGTCTC-AACACGAT-GTC-CCTGACGGCTTGAAAGTCTCCACACACGG-----TGTTGTGAGAAAGAGAA------------GATACCTGAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74661 151 + 372756 GTGCTAGG---AAACACTAGGTCACCCAAGAAGCACAGAGGCCACACCAGCTCAGTGCCTGCCACCCACCCACCCCA-GCATGTATT-AACATGAT-GTC-CCTGATGACTTGGAAGTTTCCACACCACG-----TGTTGTGAGAAAGGGAA------------CATAGCTGAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310235 150 + 16356641 GTGTTAGG---AAACACTAGCTCCACCGAGAAGCACAGAGGCCACACCAGCTCAGTGCCCGCCGCCTGCCCACCCCA-GCATGTCTC-AACGTGAT-GTC-CCTGACAACTTGAAAGTTT-CACACCACG-----TGTTGTGAGAAGGAGAA------------CATAGCTGAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179259 132 + 1231380 GTGCTAG----------------------GAAGCACAGAGGCCACACCAGCTCAGTGCCCGCCGCCCGCCCACCCTA-GCATGTCTC-AGCGTGAT-GTC-CCTGACAACTGGAAAGTTTCCACACCATA-----TCTTGTGAGAAAGAGAA------------CATAGGTGAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2710939 152 + 11732439 GTGCTGGG--AAAACACTAGCTCATGCAAGAAGCAGAGAGGCCACACCAGCTCGGTGCCCGCCGCCCGCCCACCCCA-GCATGTCTC-AACGTGAT-GTC-CCTGACGACTTGAAAGTTTCCATACCACG-----TGTTGTGAGAAAGAGAT------------TATAGCTGAAA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22875696 130 + 22939663 ATGTGAGG---AAACACCAGCTTGCTAATGGAACTTGGGAGCCATACCAACTTGGTGCCCATTCAT----------------ATCTC-AACATGATAGCC-CCTGACAGCTCTGAAAGTCCAATATTGAC-----TGTTGAGAGAAAGAAAC------------CATA------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632320 154 + 47698779 GTCACCGGCCCCACCACCCGCTTACCTGGGCTGTACGGAAGC-------------GGCCTGATCTG---GCGCCCCACACACACCTT-AACGTGAG-GTCACCTGACAGCTCTGACGATTCGGACCCTGGAGGGATATGGAAGGAAAGAGAAGCAGTGTTACTGTCCACATG--- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1886876 232 - 2029793 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=394735.000000 s hg38.chr20_KI270870v1_alt 138716 34 + 183433 TCTGAAATCCTCTCCATGTATGCGATTCAAGGGA s panTro5.chr20 66464854 34 + 66533130 TCTGAAATCCTCTCCATGTATGCGATTCAAGGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139902 34 + 62195757 TCTGAAATCCTCTCCATGTATGCGATTCAAGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 528982 34 - 578057 TCTGAAATCCTCTCCACATATGCGATTCAAGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110051190 34 - 110113093 TCCGAAATCCGCTCCATGTATGCGATTCAAGGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92785053 34 - 92844088 TCTGAAATCCTCTCCATGTATGTGACCCAGGGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96451107 34 + 96509753 TCTGAAATCCTCTCCATGTATGTGACCCAGGGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16922068 34 - 16982598 TCTGAAATCCTCTGCATGTATGTGACCCAGGGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724871 34 - 3785965 TCTGAAATCCTCTCCATGTATGTGACCCAGGGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90303086 34 - 90373283 TCTGAAATCCTCTCCATGTATGTGACCCAGGGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117688 34 - 179258 TCTGAAATCCTCTCCATGTATGTGACCCAGGGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5593186 34 - 5823884 TCTGAAGTCCTCTCCATATATATGATCCAGGGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74812 34 + 372756 TCTGAAATACCTTCCATGTATGCGACTCAAGGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310385 34 + 16356641 TCTGAAATACCTTCCATGTATGCGACTCAAGGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179391 34 + 1231380 TCTGAAATACCTTCCATGCATGCAACTCAAGGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2711091 34 + 11732439 TCTGAAATACCTTCCATGTATGCGACTCAAGGGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1887108 34 - 2029793 TCTGAAATACTCTCCATGTATGCAATTCCAGGGA i proCoq1.NW_012150197v1 I 232 I 710 s otoGar3.GL873542 22875826 34 + 22939663 TCTGAAATAGTATCTATGTATACAATTCCAGTGA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632474 34 + 47698779 TCTGAAATACCCAGTATGAATAAATTCCCAGGAA i canFam3.chr24 C 0 C 0 e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=772797.000000 s hg38.chr20_KI270870v1_alt 138750 70 + 183433 ACAAAAACAGTTTCCCTTGATGAAGGGGAG---TAGTGTTTTGC-AAGAAAGGGAGTGAAAA---TAACTCAGATTT s panTro5.chr20 66464888 70 + 66533130 ACAAAAACAGTTTCCCTTGATGAAGGGGAG---TAGTGTTTTGC-AAGAAAGGGAGTGAAAA---TAACTCAGATTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62139936 70 + 62195757 ACAAAAACAGTTTCCCTTGATGAAGGGGAG---TAGTGTTTTGC-AAGAAAGGGAGGGAAAA---TAACTCAGATTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529016 70 - 578057 ACAAAAACAGTTTCCCTTGAGGAAGGGGAG---TAGTGTTTTGC-AAGAAAGGGAGTGAAAA---TAACTCAGACTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110051224 70 - 110113093 ACAAAAACAGTTTCCCTTGATGAAGGGGAG---TAGCGTTTTGC-AAGAAAGGGAGTAAAAA---TAATTCAGATTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92785087 70 - 92844088 ACAAAAACAGTTTCCCTTGATGAAGGGGAC---TAGTGTTTTGC-AAGAAAGGGAGTAAAAA---TAATTCAGATTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96451141 70 + 96509753 ACAAAAACAGTTTCCCTTGATGAAGGGGAC---TAGTGTTTTGC-AAGAAAGGGAGTAAAAA---TAATTCAGATTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16922102 70 - 16982598 ACAAAAACAGTTTCCCTTGATGAAGGGGAC---TAGTGTTTTGC-AAGAAAGGGAGTAAAAA---TAATTCAGATTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724905 70 - 3785965 ACAAAAACAGTTTCCCTTGATGAAGGGGAC---TAGTGTTTTGC-AAGAAAGGGAGTAAAAA---TAATTCAGATTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90303120 70 - 90373283 ACAAAAACAGTTTCCCTTGAGGAAGGGGAC---TAGTGTTTTGC-AAGAAAGGGAGTAAAAA---TAATTCAGATTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117722 70 - 179258 ACAAAAACAGTTTCCCTTGATGAAGGGGAC---TAGTGTTTTGC-AAGAAAGGGAGTAAAAA---TAATTCAGATTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5593220 70 - 5823884 ACAAAAACAGTTTCCCTTGATGAAGGGGAC---TAGTGTTTTGC-AAGAAAGGGAGTAAAAA---TAATTCAGATTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74846 70 + 372756 ACAGCAACAGTTTCTCTTGATGAAGGGGAG---TAGTGTTTTGC-AAGAAAAGGAGTAAAAA---TAATTCTGATTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310419 70 + 16356641 ATAGCAACAGTTTCTCTTGATGAAGGGGAG---TAGTGTTTTGC-AAGAAAAGGAGCAAAAA---TAATTCTGATTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179425 70 + 1231380 AGAGCAACAGTTTCTCTTGATGGAGGGGAG---TAGTGTTTTGC-AAGAAAAGGAGTAAAAA---TAATTCTGATTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2711125 70 + 11732439 ACAGCAACGGTTTCTCTTGATGAAGGGGAG---GAGTGTTTTGC-AAGAAAAGGAGTAAAAA---TAATTCTGATTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22875860 73 + 22939663 TTAGCAATAGTTCCTCCTGATGAAGAGTCT---TAGGGTTTTGT-GAGAAAGTGAGTAAAAAATTCAGTTCAGATTC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47632508 64 + 47698779 ----------TCAATCCTAATGAGAAGAAGAGTTAGGGTTTTGCAAAGAACACGAGTAAAAT---GAATTCAGATTT i canFam3.chr24 C 0 I 401 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=3051919.000000 s hg38.chr20_KI270870v1_alt 138820 367 + 183433 Gggccgggcactgtggctcatgcctgtaatcccagcactttaggaggctgaggcgggtggatcacctgaggtcaggagttcgagaccagcccggccaacatggtgaaacctcatctctactaaaaatacaaaaatcagccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaagccgggaggcggaggttgcagtgagccaagattgtgccactgcactccggcctgggcaacaagagcgagactccatctcaaaaa------------------------tactactactactactaataataATTC--AGATTCGACTGTGTAGAGTAGCTGAAGAGCCAGCCACCCCCCATTTGGCCA s panTro5.chr20 66464958 386 + 66533130 Gggccgggcgctgtggctcatgcctgtaatcccagcactttaggaggctgaggcgggtggatcacctgaggtcaggagttcgagaccagcccggccaacatggtgaaacctcatctctactaaaaatacaaaaattagccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaagccgggaggcggaggttgcagtgagccaagattgtgccactgcactccggcctgggcaacaagagtgagactccatcttaaaaa---tactactactactactactactactactactactactactaATAATTC--AGATTCGACTGTGTAGAGTAACTGAAGAGCCAGCCACCTCCCATTTGGC-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140006 380 + 62195757 Aggccgggcgctgtggctcatgcctgtaatcccagcactttaggaggctgaggcgggtggatcacctgaggtcaggagttcgagaccagcccggccaacatggtgaaacctcatctctactaaaaatacaaaaattagccgggcgtggtggcgggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaagccgggaggcggaggttgcagtgagccaagattgtgccactgcactccggcctgggcaacaagagcgagactccatctcaaaaa---------tactactactactactactactactaATAATAATAATAATTC--AGATTCAACTGTGTAGAGTAACTGAAGAGCCAGCCACCTCCCATTTGGC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529086 370 - 578057 Gggccgggcgctgtggctcatgcctgtaatcccagcactttaggaggctgaggcgggtggatcacctgaggtcaggagttcgagaccagcccggccaacatggtgaaacctcatctctactaaaaatacaaaaataagctgggcatggtggcaggcgcctgtaatcccagctactcgggaggctgaggcaggagaattgcttgaagccgggaggcggaggttgcagtgagccaagattgtgccactgcactctggcctgggcaacaagagcgagactccatctcaaaaa---------------------tactactactactactactactactaATTCATAGATTCGACTGTGTAGAGTAACTGAAGAGCCAGCCACCTCCCATTTGGC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110051294 359 - 110113093 Gggccaggcgctatggctcatgcctgtaatcccagcactttaggaggctgaggcaggcggatcacctgaggtcaggagttcgagaccagcccagccaacaaggtgaaacctcatctctactaaaaatacaaaaattagccgggcgtggtggcgggcgcctgtaatcccagctacccgggaggctgaggcaggagaattgcttgaagccgggaggcggaggttgcagtgagccaagatcgcgccactgctctccggcttgggcaacaagagcgagactccatctcaaaaa------------------------------taataaTGATAATAATAATTC--AGATTCGACTGTGTGGAGTAACTGAAGAGCCAGCCACCTCCCATTTGGC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92785157 351 - 92844088 Gggccaggtgctgtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctgtactaacaatacaaaaatcaactgggtgtggtggcgggcgcctgtaatcccagctacttgggaggctgaggcaggaggattgcttgaagccaggagatggaggttgcagtgagccgagatcatgccactgcactccagccggggcaac-agagtaagactctgtctc---------------------------------aataataataataataataaTTC--AGACTCGACCATGTAGAGTAACTGAAG----AGCCACCTCCCATTTGGC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96451211 351 + 96509753 Gggccaggtgctgtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctgtactaacaatacaaaaatcaactgggtgtggtggcgggcgcctgtaatccccgctacttgggaggctgaggcaggaggattgcttgaagccaggagatggaggttgcagtgagccgagatcatgccactgcactccagccggggcaac-agagtgagactctgtctc---------------------------------aataataataataataataaTTC--AGACTCGACCATGTAGAGTAACTGAAG----AGCCACCTCCCATTTGGC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16922172 348 - 16982598 Gggccagctgctgtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctgtactaacaatacaaaaatcaactgggtgtggtggcgggcgcctgtaatcccagctacttgggaggctgaggcaggaggattgcttgaagccaggagatggaggttgcagtgagccgagatcatgccactgcactccagccggggcaac-agagtgagactccgtctc------------------------------------aataataataataataaTTC--AGACTCGACCATGTAGAGTAACTGAAG----AGCCACCTCCCATTTGGC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3724975 348 - 3785965 Gggccaggtgctgtggctcatgcctgtaatcccagcactttgggaggccgaagtgggaagatcacctgaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctgtactaacaatacaaaaatcaactgggtgtggtggtgggcgcctgtaatcccagctacttgggaggctgaggcaggaggattgcttgaagccaggagatggaggttgcagcgagccgagatcatgccactgcactccagccggggcaac-agagtgagactctgtctc------------------------------------aataataataataataaTTC--AGACTCGACCATGTAGAGTAACTGAAG----AGCCACCTCCCATTTGGC-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90303190 348 - 90373283 Gggccaggtgctgtggcttatgcctgtaatcccagcactttgggaggccgaggtgggcagatcacctgaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctgtactaacaatacaaaaatcaactgggtgtggtggcgggcgcctgtaatcccagctacttgggaggctgaggcaggaggattgcttgaagccaggagatggaggttgcagcgagccgagatcacgccactgccctccagccggggcaac-agagtgagactccgtct------------------------------------caCTAATAATAATGATAATTC--AGACTCGACCGTGTAGAGTCACTGAAG----AGCCACCTCCCATTTGGC-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 117792 351 - 179258 Gggccaggtgctgtggctcatgcctgtaatcccagcactttgagaggccaaggtgggaagatcacctgaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctgtactaacaatacaaaaatcaactgggtgtggtggtgggcgcctgtaatcccagctacttgggaggctgaggcaggaggattgcttgaagccaggagatgaaggttgcagcgagccgagatcatgccactgcactccagccggggcaac-agagtgagactccgtctc---------------------------------aacaataataataataataaTTC--AGACTCGACCATGTAGAGTAACTGAAG----AGCCACCTCCCATTTGGC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5593290 384 - 5823884 Gggccaggcgctgtggctcatgcctgtaatcccagcattttgggaggccgaggtgggcggatcacctgaggtcaggaatttgagaccagcctggccaacatggtgaaaccccatctctactaacaatacaaaaatcaactgggtgtggtggcgggcacctgtaatcccagctacttgggaggctgaggcaggaggattgcttgaagccaggaggtggaggttgcagcgagctgagatcgtgccactgcactccagccggggcaac-agagtgagactccatctcaataataataataataataataataataataataataataataataataataatTC--AGACTCGACCGTGTAGAGTAACTGAAG----AGCCACCTCCCATTTGGC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 74916 348 + 372756 Gggtcaggcacagtggctcacgcctgtcatcccagcactttgggaggcccaggtgggtggatcacctgaggtcaggagtttcagaccagcctggtcaacatggggaaaccccatctctactgaaaatataaaggttagccgggtgtggtggtgggtgcctgtaatccctgttacttgagaggctgaggcaggagaatcgcttgaagctgggaggcggaggttgcagtgagccaagatggtgccattgcacttcagcctgggcaacaagagagagactccatctcaaaaa-----------------------------------ataaTAGTAATAATTC--AGATTTGAC--TGTGGGATGACTGAAG----AGCCACCTCCCATTTGGC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310489 349 + 16356641 Aggccgggcacggtggctcacgcctgtaatcccagcactgtgggaggcccacaggctcctgactcctgaagtcaggagtttcagaccagcccggtcaacatggggaaaccctatctctactgaaaatataaaaattagccgggcgtggtggtgggtgcctgtaataccagctacttgagaggctgaggcaggagaatcgcttgaagccgggaggcagaggttgcagtgagccaagatggtgccattgccctccaacctggg-gacaagagcgagactctgtctcaaaaa-----------------------------------aTGATCGTAATAATTC--AGATCCGACTGTGTGGAGTGACTGAAG----AGCCACCTCCCATTTGGC-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179495 350 + 1231380 Gggccgggcacagtggctcatgcctgtaatcccagcactgtgggaggcccaggcgggtggatcacctgaggtcaggagtttcagaccagcctggtcaacatggggaagccccatttctactaaaaatataaaaattagccgggtgtggtggcgggtgcctgtaatcctagctacttgagaggccgaagcaggagaatcgcttgaggccgggaggcggaggttgccgtgagccgagatggtgccactgcactgcagcctgggcaacaacagcgagactccgtctcaaaaa-----------------------------------acaaTAGTAATGATTC--AGATTCGACTGCGTGGGGCGACTGAAG----AGCCACCTCCCGTTTGGC-- i cebCap1.NW_016107870v1 C 0 I 16 s aotNan1.NW_018500483v1 2711195 350 + 11732439 Gggccgggcacagtggctcatgcctgtaatcccagcattttgggaggctgaggcgggtggatcacctgaggtcaggagtttcagaccagcctggtcaacatggggaaaccccatctctactaaaaatataaaaattagccgggtgtggtggtgggtgcctgtaatcccagctacttgagaggctgaggcaggagaatcgcttgaagccgggaggcagaggttgcagtgagccgagatcgcgccattgcactccagcctgggcgacaagagcgagactctgtctcaaaaa-----------------------------------ataaTAGTAATAATTC--AGATTCGACTGTGTGGAGTGACTGAAG----GACCACCTCCCATTTGGC-- i aotNan1.NW_018500483v1 C 0 I 2 s otoGar3.GL873542 22875933 96 + 22939663 -----------------------------------CACTGTGTAA----------------------------AGTGACTAAAGAGCCGCCT-----------------CTCATTT------------------------------------------------------------------------------GGTCACTTGATCCTAGGATGT------------------------------TGCACTTCAGCAGGTGC--CTGGCCCATGCCTCCACCTCAA----------------------------------------------------------------------------------------------------------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=128004.000000 s hg38.chr20_KI270870v1_alt 139187 15 + 183433 CAGAGCCTCTTCCCA s panTro5.chr20 66465344 15 + 66533130 CAGTGCCTCTTCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140386 15 + 62195757 CAGTGCCTCTTCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529456 15 - 578057 CAGTGCCTCTTCCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110051653 15 - 110113093 CAGTGCCTCTTCCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92785508 15 - 92844088 CAGTGCCTCTTCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96451562 15 + 96509753 CAGTGCCTCTTCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16922520 15 - 16982598 CAGTGCCTCTTCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725323 15 - 3785965 CAGTGCCTCTTCCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90303538 15 - 90373283 CAGTGCCTCTTCCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118143 15 - 179258 CAGTGCCTCTTCCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5593674 15 - 5823884 CAGTGCCTCTTCCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 75264 15 + 372756 CAGTTCCTCTTCTCA i calJac3.chrUn_GL286459 C 0 I 13 s saiBol1.JH378156 16310838 15 + 16356641 CAGTTCCTCTTCGCA i saiBol1.JH378156 C 0 I 19 s aotNan1.NW_018500483v1 2711547 13 + 11732439 --GTTCCTCTTCCTA i aotNan1.NW_018500483v1 I 2 I 19 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I e cebCap1.NW_016107870v1 1179845 16 + 1231380 I e otoGar3.GL873542 22876029 0 + 22939663 C a score=345740.000000 s hg38.chr20_KI270870v1_alt 139202 45 + 183433 GCC-------------------AGTCTGTGCCTGGTGCAGGTGTCCCCCAGGGTCCCATGGCTG s panTro5.chr20 66465359 45 + 66533130 GCC-------------------AGTCTGTGCCTGGTGCAGGTGTCCCCCAGGGTCCCATGGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140401 45 + 62195757 GCC-------------------AGTCTGTGCCTGGTGCAGGTGTCCCCCAGGGTCCCATGGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529471 44 - 578057 GCC-------------------AGTCTGTGCCTGGTGCAGGTGT-CCCCAGGGTCCCATGGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110051668 45 - 110113093 GCC-------------------AGGCTGTGCCTGGTGCAGGTGTTCCCCGGGGTCCCATGGCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92785523 64 - 92844088 GCCCAGGTCCTCACCTCAGGGTCGGCTGTGCCTGGCACAGGTGCCCCCCAGGGCCCCATGGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96451577 64 + 96509753 GCCCAGGTCCTCACCTCAGGGTCGGCTGTGCCTGGCACAGGTGCCCCCCAGGGCCCCATGGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16922535 64 - 16982598 GCCCAGGTCCTCACCTCAGGGTCGGCTGTGCCTGGCACAGGTGCCCCCCAGGGCCCCATGACTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725338 64 - 3785965 GCCCAGGTCCTCACCTCAGGGTCGGCTGTGCCTGGCACAGGTGCCCTCCAGGGCCCCAAGGCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90303553 64 - 90373283 GCCCAGGTCCTCGCCTCAGGGTCGGCTGTGCCTGGCACAGGTGCCCCCCAGGGCCCCATGGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118158 64 - 179258 GCCCAGGTCCTCACCTCAGGGTCGGCTGTGCCTGGCACAGGTGCCCCCCAGGGCCCCATGGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5593689 64 - 5823884 GCCCAGGTCCTCACCTCAGGGTCGGCTGTGCCTGGCACAGGTGCCCCCCAGGGCCCCATGGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 75292 19 + 372756 ---------------------------------------------CCTCAGGGCACCATGGCTG i calJac3.chrUn_GL286459 I 13 C 0 s saiBol1.JH378156 16310872 44 + 16356641 -------------------GCTCAGCTGTGCCTGGCCCAGGTGC-CCCCAGGGCCCCATGGCTG i saiBol1.JH378156 I 19 C 0 s cebCap1.NW_016107870v1 1179861 44 + 1231380 -------------------GCTGGGCTGTGCCTGGCCCAGGTGC-CCCCAGGGCCCCATGGCTG i cebCap1.NW_016107870v1 I 16 C 0 s aotNan1.NW_018500483v1 2711579 44 + 11732439 -------------------GCTCGGCCGTGCCTGGCCCAGGTGC-CCCCAGGGCCCCATGGCTG i aotNan1.NW_018500483v1 I 19 C 0 s otoGar3.GL873542 22876029 25 + 22939663 -------------------GCTTGTCTGTGCCTGGCCCAGTTGT-------------------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e mm10.chr2 181818299 628 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=3263786.000000 s hg38.chr20_KI270870v1_alt 139247 349 + 183433 GGC--CATCCC-CATCAGAGGGGGGC-------------------TGGACATTGAATGTGAACTTCCCAAAGCTCCCATAGGGGCCCCTGGCAGT------GTCTCTGCTCTGGACG--G--GGATGAGGTGACC-TCGGACTGGCTCAGGGAATGTCCTAAAAGTTTCTGAGGGCCAGGTGGGTGGGATGAGTAACAAAGGGAAAAGAACCAAGAGAGGGGCCTGTGGAGAGAGAGAAAG---CAGGGTCCTGGCCGAGTTGGCTGGGA-AG--GGTCTGAAACGGCAGCTTCAGAGACGAGGCCAGAGTGTGGGGGCAAGGAGCCGGACGCTGCCCTCCCTGTCCAGGCCTTGTTGACCTTCCACTGGGCAGCGCAGCCCTGAGCC s panTro5.chr20 66465404 349 + 66533130 GGC--CATCCC-CATCAGAGGGGGGC-------------------TGGACATTGAATGTGAACTTCCCAAAGCTCCCATAGGGGCCCCTGGCAGT------GTCTGTGCTCTGGACG--G--GGATGAGGTGACC-TCGGACTGGCTCAGGGAATGTCCTATAAGTTTCTGAGGGCCAGGTGGGTGGGATGAGTAACAAAGGGAAAAGAACCAAGAGAGGGGCCTGTGGAGAGAGAGAAAG---CAGGGTCCTGGCCGAGGTGGCTGGGA-AG--GGTCTGAAATGGCAGCTTCAGAGACGAGGCCAGAGTGTGGGGGCGAGGAGCCGGCCGCTGCCCTCCCTGTCCAGGCCTTGTTGACCTTCCACTGAGCAGCGCAGCCCTGAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140446 349 + 62195757 GGC--CATCCC-CATCAGAGGGGGGC-------------------TGGACATTGAATGTGAACTTCCCAAAGCTCCCATAGGGGCCCCTGGCAGT------GTCTGTGCTCTGGACA--G--GGATGAGGTGACC-TCGGACTGGCTCAGGGAATGTCCTATAAGTTTCTGAGGGCCAGGTGGGTGGGATGAGTAACAAAGGGAAAAGAACCAAGAGAGGGGCCTGTGGAGAGAGAGAAAG---CAGGGTCCTGGCCGAGGTGGCTGGGA-AG--GGTCTGAAATGGCAGCTTCAGAGACGAGGCCAGAGTGTGGGGGCAAGGAGCCGGCCGCTGCCCTCCCTGTCCAGGCCTTGTTGACCTTCCACTGAGCAGCGCAGCCCTGAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529515 349 - 578057 GGC--CATCCC-CATCAGAGGCGGGC-------------------TGGACATTGAATGTGAACTTCCCAAAGCTCCCATAGGGGCCCCTGGCAGT------GTCTCTGCTCTGGATG--G--GGATGAGGTGACC-TCGGACTGGCTCAGGGAATGTCCTATAAGTTTCTGAGGGCCAGGTGGGTGGGATGAGTAACAAAGGGAAAAGAACCAAGAGAGGGGCCTGTGGAGAGAGAGAAAG---CAGGGTCCTGGCTGAGGTGGCTGGGA-AG--GGTCTGAAATGGCAGCTTCAGAGACGAGGCCAGAGTGTGGGGACAAGGAGCCGGATGCTGCCCTCCCTGTCCAGGCCTTGTTGACCTTCCACTGAGCAGCGCAGCCCTGAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110051713 337 - 110113093 GGAGGCACCCC-CATCCGAGGGGGGC-------------------TGGACATTGAATGTGAACTTCCCAAAGCCCCCATAGGGGCCCCTGGCAGT------GTCTCTGCTCTGGACG--G--GGATGAGGTGACCTTTGGACTGGCTCAGGGAATGTCCTATAAGTTTCTGAGGGCTAGGTGGGTGGGATGAGTAACAAAGGGAAAAGAACCAAGAGAGGGGCCTGTGGAGGGAGAGAAAG---CAGGGCCCTGGCTGAGGTGGCTGGGA-AG--GGTCCGACATGGCAGCTTCAGAGACGAGGCCAGAGTGTGGGGGCAAGAAGCCGGACGCTGCCCTCCCTGTCCAGGCCTTGTTGACCTTCCA---------------CTGAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92785587 346 - 92844088 GGAGGCATCCC-CGTCTGAGGGGGGC-------------------TGGACATTGAATGTGAACTTCCTAAAGCCCCCATAGGGGCCGCTGGCAGT------GTCTCTACTCTGGATG--G--GTTTGAGACGGCC-TTGGACTGGCTCAGGGAATGTCCTGTGAGTTTCTGAGGGCTGGGTGGGTGGGATGAGCAACAAAGGGAAAAGAATCCAGAGAGGGGCCTGTG--GAGAGAGAAAG---CAGGGCCCTGGCCGAGGTGGCTGGGA-AG--TGCCCGAAATGGCAGCTTCAGAGATGAGGCCAGTGT---GGGGCAAGGAGCCGGATGCTGCCCTCCCTGCCCAGGCCTTGTTGACCTTCCATCGAGTAGCACAGCTCTGTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96451641 346 + 96509753 GGAGGCATCCC-CGTCTGAGGGGGGC-------------------TGGACATTGAATGTGAACTTCCCAAAGCCCCCATAGGGGCCGCTGGCAGT------GTCTCTACTCTGGATG--G--GGTTGAGACGGCC-TTGGACTGGCTCAGGGAATGTCCTGTGAGTTTCTGAGGGCTGGGTGGGTGGGATGAGCAACAAAGGGAAAAGAATCCAGAGAGGGGCCTGTG--GAGAGAGAAAG---CAGGGCCCTGGCCGAGGTGGCTGGGA-AG--TGCCCGAAATGGCAGCTTCAGAGATGAGGCCAGTGT---GGGGCAAGGAGCCGGATGCTGCCCTCCCTGCCCAGGCCTTGTTGACCTCCCATCGAGTAGCACAGCTCTGTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16922599 346 - 16982598 GGAGGCATCCC-CGTCTGAGGGGGGC-------------------TGGACATTGAATGTGAACTTCCCAAAGCCCCCATAGGGGCCGCTGGCAGT------GTCTCTACTCTGGATG--G--GGTTGAGACGGCC-TTGGACTGGCTCAGGGAATGTCCTGTGAGTTTCTGAGGGCTGGGTGGGTGGGATGAGCAACAAAGGGAAAAGAATCCAGAGAGGGGCCTGTG--GAGAGAGAAAG---CAGGGCCCTGGCCGAGGTGGCTGGGA-AG--TGCCCGAAATGGCAGCTTCAGAGATGAGGCCAGTGT---GGGGCAAGGAGCCGGATGCTGCCCTCCCTGCCCAGGCCTTGTTGACCTCCCATCGAGTAGCACAGCTCTGTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725402 346 - 3785965 GGAGGCATCCC-CATCTGAGGGGGGC-------------------TGGACATTGAATGTGAACTTCCCAAAGCCCCCATAGGGGCCGCTGGCAGT------GTCTCTGCTCTGGATG--G--GGTTGAGACGGCC-TTGGACTGGCTCAGGGAATGTCCTGTGAGTTTCTGAGGGCTGGGTGGGTGGGATGAGCAACAAAGGGAAAAGAATCCAGAGAGGGGCCTGTG--GAGAGAGAAAG---CAGGGCCCTGGCCGAGGTGGCTGGGA-AG--TGCCCAAAATGGCAGCTTCAGAGATGAGGCCAGTGT---GGGGCAAGGAGCCGGATGCTGCCCTCCCTGCCCAGGCCTTGTTGACCTCCCACCGAGTAGCGCAGCCCTGTGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90303617 346 - 90373283 GGAGGCATGCC-CATCTGAGGCGGGC-------------------TGGACATTGAATGTGAACTTCCCGAAGCCCCCATAGGGGCCGCCGGCAGC------GTCTCTGCTCTGGAAG--G--GGTTGAGACGGCC-TTGGACTGGCTCAGGGAATGTCCTGTGAGTTTCTGAGGGCTGGGTGGGTGGGAGGAGCAACAAAGGGAAAAGAATCCAGAGAGGGGCCTGTG--GAGAGAGAAAG---CAGGGCCCTGGCCGAGGTGGCTGGGA-AG--TGCCCGAAATGGCAGCTTCAGAGATGAGGCCAGTGT---GGGGCAAGGAGCCGGGTGCTGCCCTCCCTGCCCAGGCCTTGTTGACCTCCCGCCGAGTAGCGCAGCCCTGTGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118222 346 - 179258 GGAGGCATCCC-CGTCTGAGAGGGGC-------------------TGGACATTGAATGTGAACTTCCCAAAGCCCCCATAGGGGCCGCTGGCAGC------GTCTCTGCTCTGGATG--G--GGTTGAGACGGCC-TTGGACTGGCTCAGGGAATGTCCTGTGAGTTTCTGAGGGCTGGGTGGGTGGGATGAGCAACAAAGGGAAAAGAATCCAGAGAGGGGCCTGTG--GAGAGAGAAAG---CAGGGCCCTGGCCGAGGTGGCTGGGA-AG--TGCCCGAAATGGCAGCTTCAGAGATGAGGCCAGTGT---GGGGCAAGGAGCCAGATGCTGCCCTCCCTGCCCAGGCCTTGTTGACCTCCCACCGAGTAGCGCAGCTCTGTGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5593753 346 - 5823884 GGAGGCATCCC-CGTCTGAGGGGGG--------------------TGGACATTGAATGAGAACTTCCCAAAGCCCCCACAGGGGCCGCTGGCAGT------GTCTCTGCTCTGGATG--G--GGCTGAGATGGCC-TTGGACT-GCTCAGGGAATGTCCTGTAAGTGTCTGAGGGCTGGGGGGGTGGGATGAGCAACAAAGGGAAAAGCGCCCCGAGAGGGGCCTGTGGAGAGAGAGAAAG---CAGGGCCCTGGCCGAGGTGGCTGGGA-AG--TGCCCGAAATGGCAGCTTCAGAG-TGAGGCCAGTGT--CGGGGCAAGGAGCCGGATGCTGCCCTCCCTGCCCAGGCCTCGTTGACCTCCCACTGAGTAGCGCAGCCCTGTGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 75311 351 + 372756 GGAGGCACCCC-CATCTGAGGGGGACACCCCCATCTGAGGG------------------GGACTTGCCAAAGCCCCCATAGAGGCCCCTGGCATT------GTCTCTGCTCTGGACA--G--GGATGAGATGACC-TTGGACTGGCTCAGGGAATGTCCTGTGTGTTTCTGAGGGATGGGTGGGTGGGATGAGTAATAAAAGGAAAAGAACCAATAGAGGGGCCGGTGGGGAGAGAGAACG---CAGGGCCCTGGCCAAGGTGGCTGGGA-AG--GGTCCAAAATGGCAGCTTTGGAGATGAGGCCAGAGTGTGGGGGCAAAGAGTCGGAAGCTGCCCTTCCTGTCCAGGCCTTGCCAACCTTCCCCTGGGCAGTGCAGC-CCATGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16310916 367 + 16356641 GGAGGCGCCCC-CGTCTGAGGGGGACACCCCCGTCTGAGGGGGACTGGACATTGAATGTGGACTTGCCAAAGCCCCCACAGGGGCCCCTGGCAGT------GCCTCTGCTCTGGACG--G--GGATGAGATGACC-TTGCACCGGCTCAGGGAATGTCTTCTACGTTTCTGAGGGCTGGGTGGGTGGGATGAGGCGCAAAAGGAAAAGAACCA--AGAGGGGCCGGTGGAGAGAGAGAAAG---CAGGGCCCTGGCCAAGGCGGCTGGGA-AG--GATCCGAAATGGCAGCTTTGGAGAGGAGGCCGGAGTGTGGAGGCAGGGAGTCGGAAGCTGCCGTCCCTGTCCTGGCCTTGCCGACCTCCCCCTGGGCAGCACAGC-CCATGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1179905 363 + 1231380 GGAGGCACCCC-CATCTGAGGGGGACACGCCCATCTGAGGGGGACTGGACATTGAATGTGGGCTTGCCAAAGCCCCCATAGGGGCCCCTGGCAGT------GTCTCTGCTCTGGATG--A--GGATGAGATGAAC-TTGGGCTGGCTCAGGGAATGTCTC---CGTTTCTGAGGGCTGGGTGGGTGGGATGATTAACAAAAGGAAAAGAACCAGGAGAGGGGCCTGTGGAGAGAGAGGAAC---CAGGG-CCTGGCTGAGGTGGCT-GGA-AG--GGTCCAGAATGGCAGCTTTAGAGATGA-CCTGGAGTGTGGGGGCAAGGAGTCGGAAGCTGCCCTCCCTGTCCAGGCCTTGCCAACCTCCCCCTGAGCAGTGCAGC-CTGCGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2711623 344 + 11732439 GGAGGCACCCC-CGTCTGAGGGGGAC-------------------TGGACATTGAATGTGGACTTGCCAAAGCCCCCACAGGGGCCCCTGGCAGT------GTCTCTGCTCTGGACG--G--GGATGAGACGACC-TTGGACTGGCTCAGGGAATGTCCTGTACATTTCT-AGGAC----TGGGTGGGATGAGTGGCAGAAGGAAACGAACCAAGAGAGGGGCCTGTGGAGAGAGAGAAAG---CAGGGCCCTGGCCAAGGTGGCT-GGG-AG--GCTCCAAAATGGCAGCTTTGGAGCTGAGGCCAGAGTGTGGGGGCGAGGAGTCGGAAGCTGCCCTCCCCGCCCAGGCCTTGCCAACCTCCCCCCGGGCAGCGCAGC-CCATGCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22876054 305 + 22939663 -GAGGCTTCTA-GGTTTGAGGGGGGGGCGGT--------------CAGATACTGAATAGGAACCTTTCAAAGCCTCCATGAGAGCCCCTGGCAGTGCTGTGGCCTCTGCTCTGTACT--GCTAGCTGAGATGACT-TTGGACTGGCCCAGTGGACTTCCTGTGAGTGTGTGTAGGCTGGGTGGGTGGGATGAATAA------GAAAGGACCCAAGAGGAG----------AGAGGAGGAAG---CAGGGCCCTGGATAAGGTGGCTGAGA-AGAATGTTTGCAATGGCTGCCTCTGAGAAGT-GTGTGTGTGTGGGGGCAGTTAGCC-------------TCTGTTACAGACCTGTTG------------------------------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181818927 322 + 182113224 GGCCATATCTCACAGATTTGAGAAGC-------------------TAGACATTGAATGTGAGTTATCCAAAGCCTCTGTGAGG-----------T------GTTCTTGTTATGGGCTTCA--GGCTCAGATTACC-TTGTGTTGACCTTGTAGACATTCTATGT-TGTCTGAGGCCTATGTAGGCTGGAGGAGCAAGAAGGGGAGGAGAGGAGAAAAATGGGGTTGTTCAGATAGAAGAAGAATCAGGGCCTTGGCAAAGGTGGTTAGGAGAC--TATCTCTAAGGGTTTCCT-GGAGTTGAGAT---------GGGGTACTAA-CTTGCTGCTGCC------------ACCTTGCTACTCTCCAGCTGGGCATTAT-GCCCTGTGCC i mm10.chr2 I 628 I 76 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=308926.000000 s hg38.chr20_KI270870v1_alt 139596 40 + 183433 GCC-TCTCACCCCTACGGCGGGAgcctctgcccccgccccc s panTro5.chr20 66465753 39 + 66533130 GCC-TCTCACCCCTA-GGCAGGAgcctctgcccccgccccc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140795 39 + 62195757 GCC-TCTCACCCCTA-GGCAGGAgcctctgcccccgccccc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529864 40 - 578057 GCC-TCTCACCCCTACGGCAGGAGCCTCTGCCCCTGCCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052050 40 - 110113093 CCA-TCTCACCCCTACGGCAGGAGCCTCTGCCACGGCCCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92785933 41 - 92844088 CCCATCTCACCCCTGCAGCAGGAgcctctgccactgccccc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96451987 41 + 96509753 CCCATCTCACCCCTGCAGCAGGAGCCTCTGCCACTGCCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16922945 41 - 16982598 CCCATCTCACCCCTGCAGCAGGAgcctctgccactgccccc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725748 41 - 3785965 CCCATCTCACCCCTGCAGCAGGAGCCTCTGCCACTGCCCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90303963 41 - 90373283 CCCATCTCACCCCTGCAGCAGGAGCCTCTGCCACTGCCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118568 41 - 179258 CCCATCTCACCCCTGCAGCAGGAGCCTCTGCCACTGCCCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594099 41 - 5823884 CCCATCTCACCCCTGCAGCAGGAgcccctgccactgccccc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 75662 41 + 372756 CCCATCTCAGCCCTGCAGCAGGAGCCTTTGCTGCGGAcccc i calJac3.chrUn_GL286459 C 0 I 6 s saiBol1.JH378156 16311283 26 + 16356641 CCCATCTCAGCCC---------------TGCTGCGGCCCCC i saiBol1.JH378156 C 0 I 108 s cebCap1.NW_016107870v1 1180268 41 + 1231380 CCCATCTCAGCCCTGCAGCAGCAGCCTCTGCTGCGGCCCCC i cebCap1.NW_016107870v1 C 0 I 6 s aotNan1.NW_018500483v1 2711967 41 + 11732439 CCCATCCCAGCCCTGCAGCAGGAGCCTCTGCTGTGGCCCCC i aotNan1.NW_018500483v1 C 0 I 6 s otoGar3.GL873542 22876359 18 + 22939663 ---------------CAGCAGGAGCCTCTGACA-------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e mm10.chr2 181819249 76 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=47308.000000 s hg38.chr20_KI270870v1_alt 139636 8 + 183433 gccccctg s panTro5.chr20 66465792 8 + 66533130 gccccctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140834 8 + 62195757 gccccctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529904 8 - 578057 GCCCCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052090 8 - 110113093 GCCCCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92785974 7 - 92844088 g-cccccg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452028 7 + 96509753 G-CCCCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16922986 7 - 16982598 g-cccccg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725789 8 - 3785965 GCCCCCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304004 8 - 90373283 GCCCCCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118609 8 - 179258 GCCCCCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594140 8 - 5823884 gccccccg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 75709 7 + 372756 -gtccccg i calJac3.chrUn_GL286459 I 6 I 3 s cebCap1.NW_016107870v1 1180315 7 + 1231380 -GCCCCCA i cebCap1.NW_016107870v1 I 6 C 0 s aotNan1.NW_018500483v1 2712014 7 + 11732439 -GCCCCCA i aotNan1.NW_018500483v1 I 6 C 0 s otoGar3.GL873542 22876377 8 + 22939663 GCCCTCTG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e mm10.chr2 181819249 76 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I e saiBol1.JH378156 16311309 108 + 16356641 I a score=262634.000000 s hg38.chr20_KI270870v1_alt 139644 34 + 183433 ctaccgtcctcccgAGCGCTTCCTGCGCTGACAG s panTro5.chr20 66465800 34 + 66533130 ctgccgtcctcccgAGCGCTTCCTGCGCTGACCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140842 34 + 62195757 ctgccgtcctcccgAGCGCTTCCTGCGCTGACCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529912 34 - 578057 CTACCGTCCTCCCGAGCGCTTCCTGCGCTGACCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052098 34 - 110113093 CTACCGTCCTCCCGAGCGCTTCCTGCGCTGACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92785981 31 - 92844088 ctaccg---tccGGAGCGCTTCCTGCGCTGACTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452035 31 + 96509753 CTACCG---TCCGGAGCGCTTCCTGCGCTGACTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16922993 31 - 16982598 ctaccg---tccGGAGCGCTTCCTGCGCTGACTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725797 34 - 3785965 CTACCGTCCTCCGGAGCGCTTCCTGCGCTGACTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304012 34 - 90373283 CTACTGTCCTCCGGAGCGCTTCCTGCGCTGACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118617 34 - 179258 CTACCGTCCTCCGGAGCGCTTCCTGCGCTGACTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594148 32 - 5823884 ctcccgtcctccgGA--GCTTCCTGCTCTGACCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 75719 33 + 372756 ccaccgctgtcccGAGCGCTTCCTGCACTGA-CC i calJac3.chrUn_GL286459 I 3 C 0 s saiBol1.JH378156 16311417 34 + 16356641 CCGCCGTCCTTCTGAGCGCTTCCTGCACTGACCC i saiBol1.JH378156 I 108 C 0 s cebCap1.NW_016107870v1 1180322 34 + 1231380 CCACTGTCCGCCCGAAGGTTTCCTGCGCTGACCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2712021 34 + 11732439 CCGCCGTCCTCCTGAGCGCTTCCTGCGCCGACCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22876385 21 + 22939663 -------TCCTCTGAAGGCTTCCAGC------CC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e mm10.chr2 181819249 76 + 182113224 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=137587.000000 s hg38.chr20_KI270870v1_alt 139678 11 + 183433 TGACTT---------CCCTG s panTro5.chr20 66465834 20 + 66533130 TGACTTCCCTGTATGCCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140876 11 + 62195757 TGACTT---------CCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529946 11 - 578057 TGACTT---------CCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052132 11 - 110113093 CGACTT---------CCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786012 11 - 92844088 TGACTT---------CCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452066 11 + 96509753 TGACTT---------CCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923024 11 - 16982598 TGACTT---------CCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725831 11 - 3785965 TGACTT---------CCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304046 11 - 90373283 TGACTT---------CCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118651 11 - 179258 TGACTT---------CCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594180 11 - 5823884 TGACTT---------CCCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 75752 11 + 372756 TGACTT---------CCCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16311451 11 + 16356641 TGACTT---------CCCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1180356 11 + 1231380 TGACTT---------CCCTG i cebCap1.NW_016107870v1 C 0 I 46 s aotNan1.NW_018500483v1 2712055 11 + 11732439 TGACTT---------CCCTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22876406 11 + 22939663 TGACTT---------TGCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819325 11 + 182113224 TGACTT---------CTTTG i mm10.chr2 I 76 C 0 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=264262.000000 s hg38.chr20_KI270870v1_alt 139689 45 + 183433 TATGCCCATGAATCTCCTCGTAAATGGAGCCATGGTGACCTCTC--G s panTro5.chr20 66465854 45 + 66533130 TATGCCCATGAATCTCCTCGTAAATGGAGCCATGGTGACCTCTC--G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140887 45 + 62195757 TATGCCCATGAATCTCCTCGTAAATGGAGCCATGGTGACCTCTC--G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 529957 45 - 578057 TATGCCCATGAATCTCCTCCTAAATGGAGCCATGGTGACCTCTC--G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052143 47 - 110113093 TATCCCCGTGAATCTCCTCGTAAATGGAGCAATGGTGACCTCTCTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786023 44 - 92844088 TATCCCCGTGGATCTCTTTGTAAATGGAGCAAT-GTCCTCTCTT--G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452077 44 + 96509753 TATCCCCGTGGATCTCTTTGTAAATGGAGCAAT-GTCCTCTCTT--G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923035 44 - 16982598 TATCCCCGTGGATCTCTTTGTAAATGGAGCAAT-GTCCTCTCTT--G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725842 44 - 3785965 TATCCCCGTGGATCTCTTTGTAAACGGAGCAAT-GTCCTCTCTT--G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304057 44 - 90373283 TATCCCCGTGGATCTCTTTGTAAATGGAGCAAT-GTCCTCTCTT--G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118662 44 - 179258 TATCCCCGTGGATCTCTTTGTAAATGGAGCAAT-GTCCTCTCTT--G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594191 44 - 5823884 TATCCCCGTGGGTCTCTTTGTAAATGGAGCAAT-GTCCTCTCTT--G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 75763 44 + 372756 -ATTGCCGTGGAGCTCCTGGTAAAGGGAGAAGTGGTGTCCTCTC--G i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16311462 44 + 16356641 -ATCGCCACGGAGCTCCTGCTAAAGGGAGCAGAGGTGTCCTCTC--C i saiBol1.JH378156 C 0 I 1 s aotNan1.NW_018500483v1 2712066 44 + 11732439 -ATCGCCACGGAGCTCCTGGTAAAGGGAGCAGCGGTGTCCTCTC--T i aotNan1.NW_018500483v1 C 0 I 2 s otoGar3.GL873542 22876417 43 + 22939663 TATCTCCCAGGACCTCT--ATAAATGGAGCAATGGTGTCTCCTC--T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819336 41 + 182113224 AAGCCACAGAGAATTCTGTA-AAATATGGCAGCAATATCCTT----- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I e cebCap1.NW_016107870v1 1180367 46 + 1231380 I a score=646571.000000 s hg38.chr20_KI270870v1_alt 139734 63 + 183433 GGGTCTTGTG---TTGCCAGGTAATCAGCACACAG-GGAGTGTGTGACAAACGGTAATTTGGATGAG s panTro5.chr20 66465899 63 + 66533130 GGGTCTTGTG---TTGCCAGGTAATCAGCACACAG-GGAGTGTGTGACAAGTGGTAATTTGGATGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140932 63 + 62195757 GGGTCTTGTG---TTGCCAGGTAATCAGCACACAG-GGAGTGTGTGACAAGTGGTAATTTGGATGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530002 63 - 578057 GGGTCTTGTG---TTGCCAGGTAATCAGCACACAG-GGAGTGTGTGACAAGCGGTAATTTGGATGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052190 63 - 110113093 GGGTCTTGTG---CTGCCAGGTAATCAGCACACAG-GGAGTGTGTGACAAATGGTAATTTGGATGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786067 61 - 92844088 GGGTCTTGTG---TTGCCAGGTAATCAT--CACTG-TGAGTGTGTGACAAATGGCAATTTGGATGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452121 61 + 96509753 GGGTCTTGTG---TTGCCAGGTAATCAT--CACTG-TGAGTGTGTGACAAATGGCAATTTGGATGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923079 61 - 16982598 GGGTCTTGTG---TTGCCAGGTAATCAT--CACTG-TGAGTGTGTGACAAATGGTAATTTGGATGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725886 61 - 3785965 GGGTCTTGTG---TTGCCAGGTAATCAT--CACTG-TGAGTGTGTGACAAATGCTAATTTGGATGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304101 61 - 90373283 GGGTCTTGTG---TTGCCAGGTAATCAG--CACAG-TGAGTGTGTGACAAATGGTAATTTGGATGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118706 61 - 179258 GGGTCTTGTG---TTGCCAGGTAATCAT--CACTG-TGAGTGGGTGACAAATGGTAATCTGGATGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594235 62 - 5823884 GGGTCTTGTG---TTGCCAGGTAATCAG--CACAGTTGAGCATGTGACAAATGGGAATTTGGATGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 75809 63 + 372756 GGGTCCTGTG---TTGTCAGGTCTTCAGCACACAG-TGAGTGTGTGACAGATGGTAATTTGGATGAG i calJac3.chrUn_GL286459 I 2 M 568 s saiBol1.JH378156 16311507 63 + 16356641 GGGTCCTGCG---TCGCCAGGTCTTTAGCACACAG-TGAGTGTGTGACAAACGGTAATTTGGGTGAG i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1180413 63 + 1231380 GGGCCCTGTG---TTTCCAGGTCTAAAGCACACAG-TGAGTGTGTGACAAATGGTAATTTGGGTGAG i cebCap1.NW_016107870v1 I 46 C 0 s aotNan1.NW_018500483v1 2712112 63 + 11732439 GGGTCCTGTG---TTGCCAGGTCTTTAGCACACAG-TGAGTGTGTGACAAATGGTAATTTGGATGAG i aotNan1.NW_018500483v1 I 2 C 0 s otoGar3.GL873542 22876460 63 + 22939663 GAGTCCTGTG---CAACCAGGAATTTAGCACACAA-TGAATGTGTGACAGGTGGTAGTTTGGATGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819377 66 + 182113224 GGATCCTATGTATTTGCCTGGTTCTTAGCATATAG-TGGACATATGACAAATGGTAGCTTGATTGAG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=218602.000000 s hg38.chr20_KI270870v1_alt 139797 29 + 183433 TTTCATTTA-TGAAGAGATAAGAATGAGCC s panTro5.chr20 66465962 29 + 66533130 TTTCATTTA-TGGAGAGATAAGAATGAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62140995 29 + 62195757 TTTCATTTA-TGGAGAGATAAGAATGAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530065 29 - 578057 TTGCATTTA-TGGAGAGATAAGAATGAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052253 29 - 110113093 TTTCATTTA-CGGAGAGATAAGAACGAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786128 29 - 92844088 TTTCACTGA-TGGAGAGATAAGAATGAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452182 29 + 96509753 TTTCACTGA-TGGAGAGATAAGAATGAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923140 29 - 16982598 TTTCACTGA-TGGAGAGATAAGAATGAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725947 29 - 3785965 TTTCACTGA-TGGAGAGATAAGAATGAACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304162 29 - 90373283 TTTCACTGA-TGGAGAGATAAGAATGAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118767 29 - 179258 TTTCACTGA-TGGAGAGATAAGAATGAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594297 29 - 5823884 TTTCATCGA-TGGAGAGATAAGAATGAGCC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16311570 30 + 16356641 TTTCATTTGCTGGAGAGAGAAGAGTGAACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1180476 30 + 1231380 TTTCATTTGCTGGAGAGAGAAGAGTCAACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2712175 30 + 11732439 TTTCATTTGttggagagagaagagtgaact i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22876523 30 + 22939663 TTTCATTTGTTGGAGAAAAAAAGACTGGAA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181819443 27 + 182113224 TTGCATTTGTTGGAAAGGGCTGGAAGT--- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1887142 710 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I e calJac3.chrUn_GL286459 75872 568 + 372756 M a score=285073.000000 s hg38.chr20_KI270870v1_alt 139826 23 + 183433 TTGCAGATTGAAGATCTTGTCCT s panTro5.chr20 66465991 23 + 66533130 TTGCAGATTGAAGATCTTGTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141024 23 + 62195757 TTGCAGATTGAAGATCTTGTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530094 23 - 578057 TTGCAGATTGAAGATCTTGTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052282 23 - 110113093 TTGCAGATTAAAGATCTTGTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786157 23 - 92844088 TTGCAGACTGAAGATCTTGTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452211 23 + 96509753 TTGCAGACTGAAGATCTTGTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923169 23 - 16982598 TTGCAGACTGAAGATCTTGTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725976 23 - 3785965 TTGCAGACTGAAGATCTTGTCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304191 23 - 90373283 TTGCAGACTGAAGATCTTGTCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118796 23 - 179258 TTGCAGACTGAAGATCTTGTCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594326 23 - 5823884 TTGCAGATTGAAGATCTTGTCCT i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16311600 23 + 16356641 TTGCAGATTGAAGATCTTGTCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1180506 23 + 1231380 TTGCAGATTGAAGATCTTGTCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2712205 23 + 11732439 ttgcagattgaagatCTTGTCCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1887852 23 - 2029793 TTGCAGATTGAAGATCTTGTCCT i proCoq1.NW_012150197v1 I 710 I 50 s otoGar3.GL873542 22876554 23 + 22939663 TTGTAGACTGAAGATCTTGTCCA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181819470 20 + 182113224 TTTTAGATTGAAGTTTTTAG--- i mm10.chr2 C 0 C 0 e canFam3.chr24 47632572 401 + 47698779 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I e calJac3.chrUn_GL286459 75872 568 + 372756 M a score=661775.000000 s hg38.chr20_KI270870v1_alt 139849 77 + 183433 GGGTTTGGCGTGGGTTCCTGGATGACGTGGTCCCTCAGCTCCCCAAG-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCAGTG s panTro5.chr20 66466014 77 + 66533130 GGGTTTGGCGTGGGTTCCTGGATGACGTGGTCCCTCAGCTCCCCGAG-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141047 77 + 62195757 GGGTTTGGCGTGGGTTCCTGGATGACGTGGTCCCTCAGCTCCCCGAG-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530117 77 - 578057 GGGTTTGGCGTGGGTTCCTGGATGGCGTGGTCCCTCAGCTCCCCAAG-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052305 77 - 110113093 GGGTTTGGCGTGGGTTCCTGGATGAAGTGGTCCCTCAGATCCCCAAG-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCCATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786180 77 - 92844088 AGGTTTGGAGTGGGTTCCTGGATGACGTGGTCCCTCAGATCCCCAAA-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452234 77 + 96509753 AGGTTTGGAGTGGGTTCCTGGATGACGTGGTCCCTCAGATCCCCAAA-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923192 148 - 16982598 AGGTTTGGAGTGGGTTCCTGGATGACGTGGTCCCTCAGATCCCCAAATCCTGGTCCAGGTCCTTCCCTGAGGCAGTGGGAGTGGGTTCCTGGATGACGTGGTCCCTCAGATCCCCAATTCCTGGTCCAGGTCCTTCCCTGAGGCAGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3725999 77 - 3785965 GGGTTTGGAGTGGGTTCCTGGATGACTTGGTCCCTCAGATCCCCAAA-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTGCCTGAGGCAGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304214 77 - 90373283 AGGTTTGGAGTGGGTTCCTGGATGACGTGGTCCCTCAGATCCCCAAA-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCAGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118819 77 - 179258 GGGTTTGGAGTGGGTTCCTGGATGACTTGGTCCCTCAGATCCCCAAA-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCAGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594349 77 - 5823884 AGGTTTGGAGTGGGTTCCTGGATGACGTGGGCCTTCAGATCCCCAAA-----------------------------------------------------------------------TCCTGGTCCAGGTCCTTCCCTGAGGCAGTA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16311623 77 + 16356641 GGGTCTGGCGTGGGTTCCTGGATGACCTGGCCCCTCAGATTCCCAAA-----------------------------------------------------------------------TCTTGGTCCAGGTCCCTCCCTGAGGCAGCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1180529 77 + 1231380 GGGCCTGGCGTGGGTTCCTGGATGACCTGGTCCCTCAGATCCCCAAA-----------------------------------------------------------------------TCCTGGCCCAGGTCCTTCCCTGAGGAAGCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2712228 68 + 11732439 AGGTCTGGCTTGGGTTCCTGGATGAGCTGGTCCCTCAGATCCCCAAA-----------------------------------------------------------------------TCTTGGCCCAGGCCCTTCCCT--------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22876577 76 + 22939663 AGGCCAGGTGTGGTTTTGTGGGTGATTTGGTCCCCCAGATCTCTGAA-----------------------------------------------------------------------TCAT-GTCCAGATTCCTCCCCAAGGCAGCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819490 53 + 182113224 ---------GTAGATTCTTGGAGGCCCTGCTCTCCTTATCTCATTGG-----------------------------------------------------------------------TCCTAGCCAA--TCCTT------------- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1887875 50 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e micMur3.chr18 56891709 1443 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I e calJac3.chrUn_GL286459 75872 568 + 372756 M a score=1584462.000000 s hg38.chr20_KI270870v1_alt 139926 146 + 183433 GGGACAGACACTCAGAGAGGTCATGGGCCTGGGCCCTCTG------CGCTGTCCTGTTTGTCTCTGACCCACACTGAGCCCAAGGCATTTGCCAATCTGAATTTATGTTATTTTCATAAGGGCCTCTATCCCTCTCCTGGAACACCCAGAAC s panTro5.chr20 66466091 146 + 66533130 GGGACAGACACTCAGCGAGGTCACGGGCCTGGGCCCTCTG------CATTGTCCCGTTTGTCTCTGACCCACACTCTGCCCAAGGCATTTGCCAATCTGAATTTATGTTATTTTCATAAGGGCCTCTATCCCTCTCCTAGAACACCCAGAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141124 146 + 62195757 GGGACAGACACTCAGAGAGGTCACGGGCCTGGGCCCTCTG------CATTGTCCCGTTTGTCTCTGACCCACACTCTGCCCAAGGCATCTGCCAATCTGAATTTATGTTATTTTCATAAGGGCCTCTATCCCTCTCCTGGAACACCCAGAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530194 146 - 578057 GGGACAGACACTCAGAGAGGTCATGGGCCTGGGCCCTCTG------CATTGGCCTGTTTGTCTCTGACCCACACTGTGCCCAAGGCATTTGCCAATCTGAATTTATGTTATTTTCATAAGGGCCTCTATCCCTCTCCTGGAACACCCAGAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052382 146 - 110113093 GGGACAGACCCTCAGAGAGGTCAGGGGCCTGGGCCCTCTG------CATTGTCCTGTTTGTCTCCGACCCACACTGTGCCCAAGGCATTTGCCAATCTGAATTTATGTTATTTTCATAAGGGCCTCTATCCCTGTCCTGGAACACCCAGAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786257 152 - 92844088 GGGACAGACCCTCAGAGAGGTCTTGGGCCTGGGCCCTCTGCATTGTCATTGTCCTGTTTGTCTCCGACCCACACTGTGCTCAAGGCATCTGCCAATCTGAATTTATGTTATTTTCATAACGGCCTCTATCCCTCTCCTGGAATACCCAGAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452311 152 + 96509753 GGGACAGACCCTCAGAGAGGTCTTGGGCCTGGGCCCTCTGCATTGTCATTGTCCTGTTTGTCTCCGACCCACACTGTGCTCAAGGCATCTGCCAATCTGAATTTATGTTATTTTCATAACGGCCTCTATCCCTCTCCTGGAATACCCAGAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923340 152 - 16982598 GGGACAGACCCTCAGAGAGGTCTTGGGCCTGGGCCCTCTGCATTGTCATTGTCCTGTTTGTCTCCGACCCACACTGTGCTCAAGGCATTTGCCAATCTGAATTTATGTTATTTTCATAACGGCCTCTATCCCTCTCCTGGAATACCCAGAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726076 152 - 3785965 GGGACAGACTCTCAGAGACGTCTTGGGCCTGCGCCCTCTGCACTGTCATTGTCCCGTTTGTCTCTGACCCACACTGTGCTCAAGGCATTTGCCAATCTGAATTTGTGTTATTTTCATAACGGCCTCTATCCCTCTCCTGGAATACCCAGAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304291 152 - 90373283 GGGACAGACACTCAGAGAGGTCTTGGGCCTGGGCCCTCTGCATTGTCATTGTCCTGTTTGTCTCTGACCCACACTGTGCTCAAGGCATTTGCCAATCTGAATTTATGTTATTTTCATAAGGGCCTCTATCCCTCTCCTGGAACACCCAGAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 118896 152 - 179258 GGGACAGACACTCAGAGAGGTCTTGGGCCTGGGCCCTCTGCATTGTCATTGTCCTGTTTGTCTCTGACCCACACTGTGCTCAAGGCATTAGCCAATCTGAATTTATGTTATTTTCGTAACAGCCTCTATCCCTCTCCTGGAATACCCAGAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594426 152 - 5823884 GGGACAGACACTCAGAGAGGTCTTGGGCCTGGGCCCTCTGCATTGTCACTGTCCTGTTTGTCTCTGACCCACACCGTGCTCGAGGCATTTGCCAATCTGAATTTATGTTATTTTCATAAGGGCCTCTATCCCTCTCCTGGAACACCCAGAAC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16311700 143 + 16356641 GGGACAGACACT--GAGAGGTCGTGTCCCTGGGCCATC-G------CATTGTTTTGTCTGTCTCTGGCTCACACTGTGCCCAGGGCGTTTGCCGGTCTGAATTTTTGTTATTTTCATAAGGGCCTCTGTCCCTCTCCTGGAACACCCAGAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1180606 136 + 1231380 CGGACAGACACTCAGCGAGGTCATGTCCCTGGGCCATCTG------CATTGTCTTCTTTGTCTCTGGCTCACACTGTGCCCAAGGCGTTTGCCAGTCTGAATTTATGTTGTTTTCATAAGGGCCTCTATCCCTCTCCTGAAC---------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2712296 140 + 11732439 -----AGACGCT-GGAGAGGTCACGGCCCTGGGCCACCTG------CACTGTCTTGCTTGTCTCTGGCTCACACTGTGCCCAAGGCGTTTGCCAGTCTGAACTCATGTTATTTTCATAAGGGCCTCTATCCCTCTCCTGGAACACCCAGAAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56893152 143 + 57149010 GGGACAGACACCCAGAGAGGGACTGGCCCTGGGCCCTCTG------CATCACCCTGTTTGTCTCTGACCCACACTGTGC--TGGGCCTTTGCCAATCCACGTTTGTGTTGTTTCCATAAGCACCTCTAT-CCTCTCCTTGAATACTCAGAAC i micMur3.chr18 I 1443 C 0 s proCoq1.NW_012150197v1 1887925 145 - 2029793 GGGACAGACACCCAGAGAGGGACGGGCCCTGGGCCCTCTG------CACCATCCTGTCTGTCCCTGACCCACACTGTGC-GGGGGCCTTTGTCAATCCACATTTGTGTTGTTTCCATAAGGGCCTCTATCCCTGTCCTTGAACACCCAGAAC i proCoq1.NW_012150197v1 I 50 C 0 s otoGar3.GL873542 22876653 145 + 22939663 -GGACAGACACCCAGAGAGGCATTGGCCCTTGGCCCTCTG------CTTTATCCTGTTTGTCTCTGACCCAGTCTGTGCCTGGAGCCTTTGTCATTCCATATTTGTGTTAGTTCTGTAAAGGCTTCTCTCCTTCTCCCTGAATACCCAGAAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819543 83 + 182113224 -------------------------------------------------------------------CATACACCATGCCTAGGACATTTGTCA-TCTGCATCTATATTATCACCAT-AGTATTTCTATCTCTGTATTCAAGTACCTGGAAC i mm10.chr2 C 0 C 0 e canFam3.chr24 47632572 401 + 47698779 I e dasNov3.JH569290 270778 967 - 397369 I e calJac3.chrUn_GL286459 75872 568 + 372756 M a score=146481.000000 s hg38.chr20_KI270870v1_alt 140072 14 + 183433 GAAGGAAAGGAAAA s panTro5.chr20 66466237 14 + 66533130 GAAGGAAAGGAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141270 13 + 62195757 GAAGGAAAGG-AAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530340 14 - 578057 GAAGGAAAGGAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052528 14 - 110113093 AAAGGAAAGGAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786409 14 - 92844088 AAAGGAAAGGAAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452463 14 + 96509753 AAAGGAAAGGAAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923492 14 - 16982598 AAAGGAAAGGAAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726228 14 - 3785965 AAAGGAAAGGAAAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304443 14 - 90373283 AAAGGAAAGGAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119048 14 - 179258 AAAGGAAAGGAAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594578 14 - 5823884 GAAGGAAAGGAAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 76442 12 + 372756 --GAAGGAAGGAAA i calJac3.chrUn_GL286459 M 568 C 0 s saiBol1.JH378156 16311843 14 + 16356641 AAGGGAAAGGAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1180742 14 + 1231380 AAAGGAAAGGAAAA i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56893295 14 + 57149010 AAAGGAAAGGAAAA i micMur3.chr18 C 0 I 86 s proCoq1.NW_012150197v1 1888070 14 - 2029793 AGAGGAAAGGAAAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22876798 14 + 22939663 AAAGGAAAGGAAAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819626 10 + 182113224 AAAGGAATGG---- i mm10.chr2 C 0 C 0 e canFam3.chr24 47632572 401 + 47698779 I e dasNov3.JH569290 270778 967 - 397369 I e aotNan1.NW_018500483v1 2712436 0 + 11732439 C a score=439958.000000 s hg38.chr20_KI270870v1_alt 140086 39 + 183433 CACCATTTAAGGCCAGCCTCAGGCACGA-GTGATTATGGG s panTro5.chr20 66466251 39 + 66533130 CACCATTTAAGGCCAGCCTCAGGCACGA-GTGATTATGGG i panTro5.chr20 C 0 I 6 s panPan2.chr20 62141283 39 + 62195757 CACCATTGAAGGCCAGCCTCAGGCACGA-GTGATTATGGG i panPan2.chr20 C 0 I 6 s gorGor5.CYUI01015848v1 530354 39 - 578057 CACCATTTAAGGCCAGCCTCAGGCACAA-GTGATTATGGG i gorGor5.CYUI01015848v1 C 0 I 6 s nomLeu3.chr13 110052542 39 - 110113093 CAGCATTTAAGGCCAGCCTCAGGCAGGA-GTGATTATGGG i nomLeu3.chr13 C 0 I 6 s rheMac8.chr10 92786423 39 - 92844088 CACCATTTAAGGCCAGCCTCAGGCAGGA-GTGATTATGGG i rheMac8.chr10 C 0 I 6 s macFas5.chr10 96452477 39 + 96509753 CACCATTTAAGGCCAGCCTCAGGCAGGA-GTGATTATGGG i macFas5.chr10 C 0 I 6 s macNem1.NW_012014244v1 16923506 39 - 16982598 CACCATTTAAGGCCAGCCTCAGGCAGGA-GTGATTATGGG i macNem1.NW_012014244v1 C 0 I 6 s cerAty1.NW_012001373v1 3726242 39 - 3785965 CACCATTTAAGGCCAGCCTCAGGCAGGA-GTGATTATGGG i cerAty1.NW_012001373v1 C 0 I 6 s chlSab2.chr2 90304457 39 - 90373283 CACCATTGAAGGCCAGCCTCAGGCAGGA-GTGATTATGGG i chlSab2.chr2 C 0 I 6 s manLeu1.NW_012101652v1 119062 39 - 179258 CACCATTTAAGGCCAGCCTCAGGCAGGA-GTGATTATGGG i manLeu1.NW_012101652v1 C 0 I 6 s colAng1.NW_012114444v1 5594592 39 - 5823884 CACCATGTAAGGCCAGCCTCAGGCAGGA-GTGATTACGGG i colAng1.NW_012114444v1 C 0 I 6 s calJac3.chrUn_GL286459 76454 40 + 372756 CACAGTTCAAGGCAGGCATCAGGCAGGATGTGACTGTGGG i calJac3.chrUn_GL286459 C 0 I 6 s saiBol1.JH378156 16311857 39 + 16356641 CACTGTTCAAGGCCAGCCTCAGGCAGGA-GTGACTGTGGG i saiBol1.JH378156 C 0 I 6 s cebCap1.NW_016107870v1 1180756 39 + 1231380 CACTGTTCAAGGCCAGCCTCAGGCAGCA-GTGACTGTGGG i cebCap1.NW_016107870v1 C 0 I 6 s aotNan1.NW_018500483v1 2712436 32 + 11732439 -------AAAGGCCAGCCTCAGGCAGGG-GCGACTGTGGG i aotNan1.NW_018500483v1 C 0 I 6 s proCoq1.NW_012150197v1 1888084 38 - 2029793 TGCCATC-CAGGCCAGCCTTGGGCAGGA-CTGATTATGGG i proCoq1.NW_012150197v1 C 0 I 466 s otoGar3.GL873542 22876812 39 + 22939663 TAGCATCTCAGGCTGGCCTTTGGCAGGA-GTGATTGTGGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819636 33 + 182113224 -----CTTCTGGACAGTCTCCAGCAGG--GTAATTATGGG i mm10.chr2 C 0 C 0 e canFam3.chr24 47632572 401 + 47698779 I e micMur3.chr18 56893309 86 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=1062127.000000 s hg38.chr20_KI270870v1_alt 140125 119 + 183433 TAGC-------GAGTCTCCCCCACATGAGGTCTGCGTTCTTCCTTCTAGAACATAG-ATCTCAGTGGTGGCAAAGCTGCAACATCTATGGGCATTGCCCCCTGATTGCACTGGCCTCAGTCTGGGAG s panTro5.chr20 66466296 119 + 66533130 TAGC-------GAGTCTCCCTCACATGAGGTCTGCGTTCTTCCTTCTAGAACATAG-ATCTCAGCTGTGGCAAAGCTGCAACATCTATGGGCATTGCCCCCTGATTGCGCTGGCCTCAGTCTGGGAG i panTro5.chr20 I 6 C 0 s panPan2.chr20 62141328 119 + 62195757 TAGC-------GAGTCTCCCTCACATGAGGTCTGCGTTCTTCCTTCTAGAACATAG-ATCTCAGCTGTGGCAAAGCTGCAACATCTATGGGCATTGCCCCCTGATTGAGCTGGCCTCAGTCTGGGAG i panPan2.chr20 I 6 C 0 s gorGor5.CYUI01015848v1 530399 108 - 578057 TAGC-------GAGTCTCCCCAACATGAGGTCTGCGTTCTTCCTTCTAGAACATAG-ATCTCAGTTGCGGCAAAGCTGCAACATCTAT-----------CCTGATTGCACTGGCCTCAGTCTGGGAG i gorGor5.CYUI01015848v1 I 6 C 0 s nomLeu3.chr13 110052587 119 - 110113093 TGGC-------GAGTCTGCCCCACGTGAGGTCTGAGTTCTTCCTTCTAGAACATAG-ATCTCAGTTGTGGCAAAGCTGCAACATCTATGGGCACTGCCCCCTGATTGCACTGGCCTCAGTCTGGGAG i nomLeu3.chr13 I 6 C 0 s rheMac8.chr10 92786468 119 - 92844088 TAGT-------GAGTCTCCCCGACATGAGGTCTGTGTTCCTCCTTCTAGAACATAG-ATCTCAGTTGTGGCAAAGCTGCAACATCTATGGGCATTGCCCCCCGATTGCACTGGCCTCAGTCTGGGAG i rheMac8.chr10 I 6 C 0 s macFas5.chr10 96452522 119 + 96509753 TAGT-------GAGTCTCCCCCACATGAGGTCTGTGTTCCTCCTTCTAGAACATAG-ATCTCAGTTGTGGCAAAGCTGCAACATCTATGGGCATTGCCCCGCGATTGCACTGGCCTCAGTCTGGGAG i macFas5.chr10 I 6 C 0 s macNem1.NW_012014244v1 16923551 119 - 16982598 TAGT-------GAGTCTCCCCCACATGAGGTCTGTGTTCCTCCTTCTAGAACATAG-ATCTCAGTTGTGGCAAAGCTGCAACATCTATGGGCATTGCCCCCCGATTGCACTGGCCTCAGTCTGGGAG i macNem1.NW_012014244v1 I 6 C 0 s cerAty1.NW_012001373v1 3726287 119 - 3785965 TAGT-------GAGTCTCCCCCACATGAGGTCTGTGTTCCTCCTTCTAGAACATAG-ATCTCAGTTGTGGCAAAGCTGCAACATCTATGGGCATTGCCCCCCGATTGCACTGGCCTCAGTCTGGGAG i cerAty1.NW_012001373v1 I 6 C 0 s chlSab2.chr2 90304502 118 - 90373283 TAGT-------GAGTCTCCCCCACATGAGGTCTGTGTTCCTCCTTCTAGAACATAG-ATCTCGG-TGTGGCAAAGCTGCAACATCTATGGGCATTGCCCCCCGATTGCACTGGCCTCAGTCTGGGAG i chlSab2.chr2 I 6 C 0 s manLeu1.NW_012101652v1 119107 119 - 179258 TAGT-------GAGTCTCCCCCACATGAGGTCTGTGTTCCTTCTTCTAGAACATAG-ATCTCAGTTGTGGCAAAGCTGCAACATCTATGGGCATTGCCCCCCGATTGCACTGGCCTCAGTCTGGGAG i manLeu1.NW_012101652v1 I 6 C 0 s colAng1.NW_012114444v1 5594637 118 - 5823884 TAGC-------GAGTCTCCCCCACATGAGGTCTGTGTTCTCCCTTCTAGAACATAG-ATCTCAGTTGTGTCAAAGCTGCAACATGTGTGGGCATTGCCCC-CGATTGCACTGGCCTCAGTCTGGGAG i colAng1.NW_012114444v1 I 6 C 0 s calJac3.chrUn_GL286459 76500 120 + 372756 TAGC------GGAGTCTCCCCAACATGAGGTCTGTGTTCTTTCTTCTAGAACATAG-ATCTCAGTTGTGGCAAAGCTGCAACATCTATGGGCATCACCCCCCGATTGCACTGGCCTCAGGCTGGGGA i calJac3.chrUn_GL286459 I 6 C 0 s saiBol1.JH378156 16311902 117 + 16356641 TAGC------AGAGTCTCCCCGACATGAGGTCTGTGTGCTTCCTTCTAGAACATAG-ATCTCAGTTGTGGCAAAGCTGCAACATCTATGGGCATCA---CCCGATTGCACTGGCCTCAGGCTGCGAG i saiBol1.JH378156 I 6 C 0 s cebCap1.NW_016107870v1 1180801 120 + 1231380 TAGC------GGGGTCTCCCCAACATGAGGTCTGTGTTCTTCCTTCTAGAACATAG-ATCGCAGTTGTGGCAAAGCTGCAACATCTATGGGCATCACCCCCTGATTGCACTGGCCTCAGGCGTGGAG i cebCap1.NW_016107870v1 I 6 C 0 s aotNan1.NW_018500483v1 2712474 121 + 11732439 TGGC------GGAGTCTCCCCGACGTGAGGTCTGTGTTCCTCCTTCTAGAACATAGAATCTCAGTTGTGGCAAAGCTGCAGCGTCTATGGGCATCGCCCCCTGACTGCACTGGCCTCAGGCTGGGAG i aotNan1.NW_018500483v1 I 6 C 0 s otoGar3.GL873542 22876851 14 + 22939663 ------------------------------------------------------------------GTATCCAAGTGGCA----------------------------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819669 85 + 182113224 TAGTCAAAGTCAAGACTTTCCTGTCTGAGTACTGTGTTCTCC---------------A---------------------AATACCCATGGGTACCATGCCATGGT-----AGGTCACAG-CTCTGAA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I e canFam3.chr24 47632572 401 + 47698779 I e micMur3.chr18 56893309 86 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=681764.000000 s hg38.chr20_KI270870v1_alt 140244 78 + 183433 GCTGTGGGGTGACAG--GCCTCTGCTGTCCCTGAGCTCCCCTGCTTAGGGGAC-CTTGTCATTCTTTTGTGATCCATAGGC s panTro5.chr20 66466415 78 + 66533130 GCTGTGGGGTGACAG--GCCTCTGCTGTCCCTGAGCTCCCCTGCTTAGGGGAC-CTTGTCATTCTTTTGTGATCCATAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141447 78 + 62195757 GCTGTGGGGTGACAG--GACTCTGCTGCCCCTGAGCTCCCCTGCTTAGGGGAC-CTTGTCATTCTTTTGTGATCCATAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530507 78 - 578057 GCTGTGGGGTGACAG--GCCTCTGCTGTCCCTGAGCTCCCCTGCTTAGGGGAC-CTTGTCATTCTTTTGTGATCCATAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052706 77 - 110113093 GCTGTGGGGTGACAG--GCCCCTGCTGCCCCTGAGCTCCCCTGTTT-GGGGAC-CTTGTCATTCTCTTGTGATCCATCGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786587 77 - 92844088 GCTGTGGGGTGACAG--GCCCCTGCTGTCCCTGAGCTCCCCTGCTTAGGGTAC-CTTGTCATTCTCATG-GATCCATAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452641 77 + 96509753 GCTGTGGGGTGACAG--GCCCCTGCTGTCCCTGAGCTCCCCTGCTTAGGGTAC-CTTGTCATTCTCATG-GATCCATAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923670 77 - 16982598 GCTGTGGGGTGACAG--GCCCCTGCTGTCCCTGAGCTCCCCTGCTTAGGGTAC-CTTGTCATTCTCATG-GATCCATAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726406 77 - 3785965 GCTGTGGGGTGACAG--GCCCCTGCTGTCCCTGAGCTCCCCTGCTTAGGGTAC-CTTGTCATTCTCATG-GATCCATAGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304620 77 - 90373283 GCTGTGAGGTGACAG--GCCCCTGCTGTCCCTGAGCTCCCCTGCTTAGGGGAC-CTTGTCATTCTCATG-GATCCATAGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119226 77 - 179258 GCTGTGGGGTGACAG--GCCCCTGCTGTCCCTGAGCTCCCCTGCTTAGGGTAC-CTTGTCATTCTCATG-GATCCATAGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594755 76 - 5823884 GCTGTGGGGTGACAG--GCCCCTGCTGCCCCTGAGCT-CCCTGCTTAGGGTAC-CTTGTCATTCTCATG-GATCCAGAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 76620 78 + 372756 GCTGTGGGGTGACAG--GCCCCTCCTGTCCCTGAGCTCCCTTGCTTAGGGTAC-CTTGTCATTCTATTGTGATCCATAGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312019 73 + 16356641 GCTGTGTGGTGACAG--GCCCCTGCTGTACCTGAGCTCCC--GCTTAGGGTAC-CTTG---TTCTCTTGTGATCCATATTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1180921 78 + 1231380 GCTGTGGGGTGACAG--GCCCCTGCTGTCCCTGAGCTCCCCTGCTTAGGGTAC-CTTGTCATTCTCTTCTGATCCATAGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2712595 38 + 11732439 GCTGTGGGGTGACAG--GCCCCTGCTGTCCCTGAGCCCCC----------------------------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22876865 36 + 22939663 ---------------------------------------------TAGGGTGCTCTTCTCATCCTCCTGGGATCCATAGGC i otoGar3.GL873542 C 0 I 11 s mm10.chr2 181819754 52 + 182113224 GCTGTATGTTAACAA---------------------------GTTTAGGGTGCCCTCACCATTCTCCT--GATTTGCAGGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47632973 79 + 47698779 GCTGGGGAGCAGCAGTGGCCCCAGCTGCCTCACA-CTGCCTGGCTCCGGGTGC-CCTTGTGACCTTCTGTGACCCCAGGGC i canFam3.chr24 I 401 C 0 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I e micMur3.chr18 56893309 86 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=34200.000000 s hg38.chr20_KI270870v1_alt 140322 2 + 183433 CC s panTro5.chr20 66466493 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141525 2 + 62195757 CC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530585 2 - 578057 CC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052783 2 - 110113093 CC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786664 2 - 92844088 CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452718 2 + 96509753 CC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923747 2 - 16982598 CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726483 2 - 3785965 CC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304697 2 - 90373283 CC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119303 2 - 179258 CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594831 2 - 5823884 CC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 76698 2 + 372756 CC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312092 2 + 16356641 CC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1180999 2 + 1231380 CC i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56893395 2 + 57149010 CC i micMur3.chr18 I 86 C 0 s otoGar3.GL873542 22876912 2 + 22939663 CC i otoGar3.GL873542 I 11 C 0 s mm10.chr2 181819806 2 + 182113224 CC i mm10.chr2 C 0 C 0 s canFam3.chr24 47633052 2 + 47698779 CC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I e dasNov3.JH569290 270778 967 - 397369 I e aotNan1.NW_018500483v1 2712633 0 + 11732439 C a score=1795786.000000 s hg38.chr20_KI270870v1_alt 140324 152 + 183433 CCAG-GCCTATGCTTGATGCAAGCTCCCAGGGAGTGGCCTCTAGGTGGTCTCAGCTGACAACATGGCTCCACATTGCTG-AGTGACACACAAGTGACTCCAGCAGCAAGG-CTTGGAGGGAACCTGAGAG-CAGCCCCCAGGCCCAGGGTCACGGC--- s panTro5.chr20 66466495 152 + 66533130 CCAG-GCCTGTGCTTGATGCAAGCTCCCAGGGAGTGGCCTCTGGGTGGTCTCAGCTGACAACATGGCTCCACATTGCTG-AGTGACACACAAGTGACTCCAGCAGCAAGG-CTTGGAGGGAACCTGAGAG-CAGCCCCCAGGCCCAGGGTCACGGC--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141527 152 + 62195757 CCAG-GCCTGTGCTTGATGCAAGCTCCCAGGGGGTGGCCTCTGGGTGGTCTCAGCTGACAACATGGCTCCACATTGCTG-AGTGACACACAAGTGACTCCAGCAGCAAGG-CTTGGAGGGAACCTGAGAG-CAGCCCCCAGGCCCAGGGTCACGGC--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530587 152 - 578057 CCAG-GCCTATGCTTGATGCAAGCTCCCAGGGAGTGGCCTCTGGGTGGCCTCAGCTGACAACAGGGCTCCACGTTGCTG-AGTGACACACAAGTGACTCCAGCAGCAAGG-CTTGGAGGGAACCTGAGAG-CAGCCCCCAGGCCCAGGGTCACGGC--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052785 151 - 110113093 CCAG-GCCTATGCTTGATGCAAGCTCCTAGGGAGTGGCCTCTGGGTGGTCTCAGCTGACGACATGGCTCCACATTGCTG-AGTGACACAC-AGTGACTCCAGCAGCAAGG-CTTGGAGTGAACCTGAGAG-CAGCCCCCAGGCCCAGGGTCACGGC--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786666 150 - 92844088 CCAG-GCCTATGCGTGATGCAAGCTCCCAGGGAGTAGCCTCTGGGGGGTCTCAGCTGACAACATGGCTCCACATTGCTG-AGTGACACAGAAGTGACTCCAGCAGCAAGG-CTCGGAGTGAACCTGAGGG-CAGCCCCCAGGCCCAGGGTCATA----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452720 150 + 96509753 CCAG-GCCTATGCGTGATGCAAGCTCCCAGGGAGTAGCCTCTGGGGGGTCTCAGCTGACAACATGGCTCCACATTGCTG-AGTGACACAGAAGTGACTCCAGCAGCAAGG-CTCGGAGTGAACCTGAGGG-CAGCCCCCAGGCCCAGGGTCATA----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923749 150 - 16982598 CCAG-GCCTATGCGTGATGCAAGCTCCCAGGGAGTAGCCTCTGGGTGGTCTCAGCTGACAACATGGCTCCACATTGCTG-AGTGACACAGAAGTGACTCCAGCAGCAAGG-CTCGGAGTGAACCTGAGGG-CAGCCCCCAGGCCCAGGGTCATA----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726485 152 - 3785965 CCAG-GCCTATGCGTGATGCAAGCTCCCAGGGAGTAGCCTCTGGGTGGTCTCAGCTGACAACATGGCTCCACATTGCTG-AGTGACACAGAAGTGACTCCAGCAGCAAGG-CTCGGAGTGAACCTGAGGG-CAGCCCCCAGGCCCAGGGTCATAGC--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304699 148 - 90373283 CCAG-GCCTAAGCTTGAT----GCTCCCAGGGAGTGGCCTCTGAGTGGTCTCAGCTGACCACATGGCTCCACATTGCTG-AGTGACACAATAGTGACTCCAGCAGCAAGG-CTCAGAGTGAACCTGAGGG-CAGCCCCCAGGCCCAGGGTCATAGC--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119305 152 - 179258 CCAG-GCCTATGCGTGATGCAAGCTCCCAGGGAGTAGCCTCTGGGTGGTCTCAGCTGACAACATGGCTCCACATTGCTG-AGTGACACAGAAGTGACTCCAGCAGCAAGG-CTCGGAGTGAACCTGAGGG-CAGCCCCCAGGCCCAGGGTCATAGC--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594833 148 - 5823884 CCAG-GCCTATGCTTGAT----GCTCCCGGGGAGTAGCCTCTGGGTGGTCTCAGCTGACAACACGGCCCCACATTGCTG-AGGGACACAGAAGTGACTCCAGCAGCAAGG-CTTGGAGTGAACCTGAGGG-CAGCCCCCAGGCCCAGGGTCGTAGC--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 76700 152 + 372756 CCAG-GTCTATGCTTGATGCAAGCTCCCGGGGAGTGGCCACTGGGTGAGCTCAGCTGACAACATGGCTCCACGTTGCTG-AGTGACATGGAAGTGACTCCAGCAGCAAGG-CTTGGAGTGAACCTGAGGG-CAGCCCCCAGGCCCAGGGTCACAGC--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312094 152 + 16356641 CCAG-GTCTATGCTTGATGCACGCTCCTGGGGAGTGGCCTCTGGGTGATCTCAGCTGACAACATGGCTCCACGTTGCTG-AGTGACATGGAAGTGACTCCAGCAGCAAGG-CTTGGAGTGAGCCTGAGGG-CAGCCCGCAGGCCCAAGGTCACAGC--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181001 152 + 1231380 CCAG-GTCTATGCTTGATGCAAGCTCCCAGGGAGTGGCCTCTGGGTGATCTCAGCTGACAACATGGCTCCACGTTGCTG-AGTGACATGGAAGTGCCTCCAGCAGCAAGG-CTTGGAGTGAACCTGAGGG-CAGCCCCCAGGCCCAGGGTCACAGC--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2712633 136 + 11732439 --AG-GTCTGTGCTTGACGC--------------TGGCCTCTGGGTGGTCTCAGCTGACGACATGGCTCCACGTTGCTG-AGTGACATGGAAGTGACTCCAGCAGCAAGG-CTTGGAGTGAACCTGAGGG-CAGCCCCCCGGCCCAGGGTCACAGC--- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56893397 154 + 57149010 CCAG-GCCCATGCTTAGCGCAAGATCCCAGGGAGTGGCCTCTGGGTGGTCTTGGCTGACAGCAGAGTTCTGCATTGCTGAAGAGGCACAGCAGTGACCCCAGCAGCAAGGCCTTGGTGTGAACCTGAGAGCCAGC-CCCAGGCACAGGGTCGCAGC--- i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22876914 155 + 22939663 CCAG-GCCTATACTAGGTGCGAGGTCCCAAGGAGTAGCTTCTGGGTGGTTTTGGCTGGCAACATAATTCCAAATTGCTTAAGTGGCAAAGAAGTGATCCCAGAAGCAAGGCCTTGGTATGGACCTAAGGGCCAGCTTCTGGGCCCAGATGCATGGC--- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47633054 125 + 47698779 CCAGAGACTGTGCTTGGAGCAGTCTCCCAGGGAGTAGCCCCTGGGTGGTTTCA-------------CTCCTCGTCGTGG-GGTGATGGAGAAGTGA-TGCGGCAGCAAGG-TC------------------CGGCTCTGTCTCCCAGGGACATAGCGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I e mm10.chr2 181819808 0 + 182113224 C e dasNov3.JH569290 270778 967 - 397369 I a score=77187.000000 s hg38.chr20_KI270870v1_alt 140476 10 + 183433 TGCTGGAGGG s panTro5.chr20 66466647 10 + 66533130 TGCTGGAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141679 10 + 62195757 TGCTGGAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530739 10 - 578057 TGCTGGAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052936 10 - 110113093 TGCTGGAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786816 1 - 92844088 ---------G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452870 1 + 96509753 ---------G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923899 1 - 16982598 ---------G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726637 10 - 3785965 TGCTGGAGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304847 10 - 90373283 TGCTGGAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119457 10 - 179258 TGCTGGAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594981 10 - 5823884 TGCCGGAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 76852 10 + 372756 TGCTGGAGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312246 10 + 16356641 TGCTGGGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181153 10 + 1231380 TGCTGGAGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2712769 10 + 11732439 TGCTGGAGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56893551 10 + 57149010 TGCGGGAGGG i micMur3.chr18 C 0 I 201 s mm10.chr2 181819808 6 + 182113224 TGCTAG---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47633179 10 + 47698779 TCCCGAGGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I e dasNov3.JH569290 270778 967 - 397369 I e otoGar3.GL873542 22877069 0 + 22939663 C a score=723356.000000 s hg38.chr20_KI270870v1_alt 140486 77 + 183433 CACGGAAAGAAGGTGGCTGTGGAGACCCCAGTCATGCAGGGGCTGTGAGGCCAAAGCGGAAGAGGGAGCGTGGCCCG s panTro5.chr20 66466657 77 + 66533130 CACGGAAAGAAGGTGGCTGTGGAGACCCCAGCCATGCAGGGGCTGTGAGGCCAAAGCGGAAGAGGGAGCGTGGCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141689 77 + 62195757 CACGGAAAGAAGGTGGCTGTGGAGACCCCAGCCATGCAGGGGCTGTGAGGCCAAAGCGGAAGAGGGAGCGTGGCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530749 77 - 578057 CACGGAAAGAAGGTGGCTGTGGAGACCCCAGCCATGCAGGGGCTGTGAGGCCAAGGCGGAAGAGGGAGCGTGGCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110052946 57 - 110113093 CACAGAAAGAAGGTGGCTGCAGAGACCCCAGCCAT--------------------GCGGAAGAGGGAGCGTGGCCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786817 77 - 92844088 CACGGAAAGAAGGTGGCTGCGGAGACTCCAGCCATACAGGGGCTGGGAGGCCAAGGCGGAAGACGGAGCGTGGCCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452871 77 + 96509753 CACGGAAAGAAGGTGGCTGCGGAGACTCCAGCCATACAGGGGCTGGGAGGCCAAGGCGGAAGACGGAGCGTGGCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923900 77 - 16982598 CACGGAAAGAAGGTGGCTGCGGAGACTCCAGCCATACAGGGGCTGTGAGGCCAAGGCGGAAGAGGGAGCGTGGCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726647 77 - 3785965 CACGGAAAGAAGGTGGCTGCGGAGACTCCAGCCATACAGGGCCTGTGAGGCCAAGGCGGAAGAGGGAGCGTGGCCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304857 77 - 90373283 CACGGAAAGAAGGTGGCTGCGGAGACTCCAGCCATACAGAGGCTGTGAGGCCAAGGCGGAAGAGGGAGCGTGGCCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119467 77 - 179258 CACGGAAAGAAGGTGGCTGCGGAGACTCCAGCCACACAGGGCCTGTGAGGCCAAGGCGGAAGAGGGAGCGTGGCCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5594991 77 - 5823884 CACGGAAAGAAGGTGGCTGCGGAGACTCCAGCCATACAGGGGCTGTGAGGCCAAGGCGGAAGAGGGAGCGTGGCCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 76862 77 + 372756 CAGGGAAAGAAGGTGGCTGTGGAGACTCCAGCCATGCAAGGGCTGTGAGGCCAAAGCAGAAGAGGGAGTATGGCCCC i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16312256 77 + 16356641 CAGGGAAAGAAGGCGGCCGTGGAGACTCCAGCCATGCAGGGGCTGTGAGGCCAAAGCAGAAGAGGGAGCATGGCCCC i saiBol1.JH378156 C 0 I 2 s cebCap1.NW_016107870v1 1181163 77 + 1231380 CAGGGAAAGAAGGTGGCTGTGGAGACTCCAGCCATGCAGGGGCTGTGAGACCAAAGCAGAAGAGGGAGCATGGCCCC i cebCap1.NW_016107870v1 C 0 I 14 s aotNan1.NW_018500483v1 2712779 77 + 11732439 CAGGGAAAGAAGGCGGCTGTGGAGACTCCAGCCGCACAGGGGCTGTGAGGCCAAAGCAGAAGCGGGAGCATGGCCCC i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22877069 10 + 22939663 --------------------------CCCTGCCATG----------------------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819814 30 + 182113224 ---GCAAA---------------------AGCCAT-------------GGGCAAAAAGGGAGAGGGA---------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47633189 75 + 47698779 AGGGGACAGACGGCAGCTGCTGACCTTCCTGCGGCGCAGGAGGCGCAAGGCTGAGGCGG--GAGGCGCCGTGATCCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I e micMur3.chr18 56893561 201 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=35026.000000 s hg38.chr20_KI270870v1_alt 140563 20 + 183433 ----G--GTCTTCACACTCAGCCCGG s panTro5.chr20 66466734 20 + 66533130 ----G--GTCTTCACACTCAGCCCGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141766 20 + 62195757 ----G--GTCTTCACACTCAGCCCGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530826 20 - 578057 ----G--GTCTTCACACTCAGCCCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053003 22 - 110113093 ----GCAGTCTTCACATTCAGCCCGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786894 21 - 92844088 ----GCAGTCTTCATGTTCAG-CCGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452948 22 + 96509753 ----GCAGTCTTCATGTTCAGCCCGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923977 22 - 16982598 ----GCAGTCTTCATATTCAGCCCGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726724 22 - 3785965 ----GCAGTCTCCACATTCAGCCGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304934 22 - 90373283 ----GCAGTCTTCACATTCAGCCCGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119544 22 - 179258 ----GCAGTCTCCACATTCAGCCGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595068 22 - 5823884 ----GCAGTCTTCACGTTCGGCCGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 76941 12 + 372756 ------GGCCTTCGTATT-------- i calJac3.chrUn_GL286459 I 2 I 1 s saiBol1.JH378156 16312335 12 + 16356641 ------GGCCTTCGTACT-------- i saiBol1.JH378156 I 2 I 1 s aotNan1.NW_018500483v1 2712857 12 + 11732439 ------TGGCTTCATATT-------- i aotNan1.NW_018500483v1 I 1 I 1 s otoGar3.GL873542 22877079 16 + 22939663 ----------GTCATATCTAGCCTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819844 15 + 182113224 -----CAACATCCCCATCTG------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47633264 21 + 47698779 TGCTGCCCCCCTCGTGGTTGG----- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I e micMur3.chr18 56893561 201 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I e cebCap1.NW_016107870v1 1181240 14 + 1231380 I a score=1082859.000000 s hg38.chr20_KI270870v1_alt 140583 109 + 183433 AAGGGCCA--GTTCTTCCCTGAGGCTCCAGGACCTCAGCGGCCCTCCCTGCCTCACTCAGAAGC---CCTTTAACGGCTCTGA-GTTGGGCTCCCCTTGTGTCTGGCTTGAGAGA s panTro5.chr20 66466754 109 + 66533130 AAGGGCCA--GTTCTTCCCTGAGGCTCCAGGACCTCAGCGGCCCTCCCTGCCTCACTCAGAAGC---CCTTTACCGGCTCTGA-GTTGGGCTCCCCTTGTGTCTGGCTTGAGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141786 109 + 62195757 AAGGGCCA--GTTCTTCCCTGAGGCTCCAGGACCTCAGCGGCCCTCCCTGCCTCACTCAGAAGC---CCTTTACCGGCTCTGA-GTTGGGCTCCCCTTGTGTCTGGCTTGAGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530846 108 - 578057 AAGGGCCA--GTTCTTCCCTGAGGCTCCAGGACCTCAGCGGCCCTCCCTGCCTCACTCAGAAGC---CCTTTGACG--TTTGATGTTGGGCTCCTCTTGTGTCTGGCTTGAGAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053025 107 - 110113093 AAGGGCCA--GTTCTTCCCTGAGGCTCCAGGACCTCAGCTACCCTCCCTGCCTCACTCTGAAGC---CCTTTAATG--TGTGATGTTGGGTTCC-CTCGTGTCTAGCTTGAGAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92786915 108 - 92844088 GAGGGCCA-GGTTCTTCCCTGAGGCTCCAGGACCTCAGCTGCCCTCCCTGCCTCACTCAGAAGT---CCTTTGATG--TGTGATGCTGGGCTCC-CTCGTGTCTGGCTTGGGAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96452970 108 + 96509753 AAGGGCCA-GGTTCTTCCCTGAGGCTCCAGGACCTCAGCTGCCCTCCCTGCCTCACTCAGAAGT---CCTTTGATG--TGTGATGCTGGGCTCC-CTCGTGTCTGGCTTGGGAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16923999 108 - 16982598 AAGGGCCA-GGTTCTTCCCTGAGGCTCCAGGACCTCAGCTGCCCTCCCTGCCTCACTCAGAAGC---CCTTTAATG--TGTGATGCTGGGCTCC-CTCGTGTCTGGCTTGGGAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726746 108 - 3785965 AAGGGCCA-GGTTCTTCCCTGAGGCTCCAGGACCTCAGCTGCCCTCCCTGCCTCACTCAGAAGT---CCTTTAATG--TGTGATGCTGGGCTCC-CTCGTGTCTGGCTTGGGAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90304956 108 - 90373283 AAGGGCCA-GGTTCTTCCCTGAGGCTCCAGGACCTCAGCTGCCCTCCCTGCCTCACTCAGAAGT---CCTTTAATG--TGTGATGCTGGGCTCC-CTCGTGTCTGGCTTGGGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119566 108 - 179258 AAGGGCCA-GGTTCTTCCCTGAGGCTCCAGGACCTCAGCTGCCCTCCCTGCCTCACTCAGAAGT---CCTTTAATG--TGTGATGCTGGGCTCC-CTCGTGTCTGGCTTGGGAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595090 108 - 5823884 AAGGGCCA-GGTTCTTCCCTGAGGCTCCAGGACCTCAACTGCCCTCCCTGCCTCACTCAGAAGT---CCTTTAATG--TGTGATGCTGGGCTCT-CTCGTGTCTGGCTTGGGAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 76954 107 + 372756 -AGGGCCA-GGTTCTTCCCTGAGGCTCCAGGACCTCAGCTGCCCTCCCTGCCTTACTTGGAAGT---CCTTTAATG--TGTGATGTTGGGCTCC-CTTATGTCTGGCTTGGGAGG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16312348 107 + 16356641 -AGGGCCG-GGTTCTTCCCTGAGGCTCCAGGACCTCAGCTGCCCTCCCTGCCTTACTCGGAAGT---CCTTTAATG--TGTGATGTTGGGCTCC-CTTGTGTCTGGCTTGCGAGG i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1181254 107 + 1231380 -AAGGGCG-GGTTCTTCCCTGAGGCTCCAGGACCTCAGCTGCCCTCCCTGCCTTATTCAGAAGT---CCTTTAATA--TGTGATGTTGGGCTCC-CTTGTGTCTGGCTTGGGAGG i cebCap1.NW_016107870v1 I 14 C 0 s aotNan1.NW_018500483v1 2712870 107 + 11732439 -AGGGCCG-GGTTCTTCCCTGAGGCTCCAGGGCCTCAGCTGCCCTCCCTGCCTAACTCGGAAGT---CCTTTAACG--TGTGATGTTGGGCTCC-CTCGAGTCTGGCTTGGGAGG i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22877095 108 + 22939663 AAGGCCTA-GATTCTTTCTGGAGCCTCCAGGACTCTGGCTCTCCTCCCTGTCTCACTCAGGAGTCCCCCCTTGGTG--TGTAAGGTTAGGTTCT----GTGTGTGTCTTGGGAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819859 90 + 182113224 GAAAGCCA---------------GCGATGGGA-TTCAGCTGG-CTTCGTGCCTCACTCAAAAGT----ATAAAGTA--CATGATGCTGGA-TAT-CTAGAGCCTGGTTGTGCAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47633285 73 + 47698779 GAAGGCTGCAGGTCTGCCCTGGGGCATCAGGA------------------------------AT---CTC--------TGTGACAGCGGGCACG-TCCGCGTCGGGGCTGCGGGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I e micMur3.chr18 56893561 201 + 57149010 I e dasNov3.JH569290 270778 967 - 397369 I a score=409879.000000 s hg38.chr20_KI270870v1_alt 140692 34 + 183433 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT s panTro5.chr20 66466863 34 + 66533130 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141895 34 + 62195757 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530954 34 - 578057 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053132 34 - 110113093 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787023 34 - 92844088 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453078 34 + 96509753 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924107 34 - 16982598 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726854 34 - 3785965 GTCTCCAGGCTTCTCCTCCCAACCCT-TCACCCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305064 34 - 90373283 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119674 34 - 179258 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595198 34 - 5823884 GTCTCCAGGCTTCTCCTCCCAACCCT-TCGCCCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77061 35 + 372756 GTCTCCAGGCTTCTCCTCCCAACCCTGGCGCCACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312455 35 + 16356641 GTCTCCAGGCTTCTCCTCCCAACCCTGGCGCTCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181361 35 + 1231380 GTCTCCAGGCGTCTCCTTCCAACCCTGGTGCCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2712977 32 + 11732439 GTCTCCAGGCTTCTC---CCAACCCTGGCGCCCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56893762 35 + 57149010 GTCTCCAGGCTTTTCCTCCCAACACTGGTGCCCCT i micMur3.chr18 I 201 C 0 s otoGar3.GL873542 22877203 35 + 22939663 GTCTCTGGGTTTCTCCTTCCAACCTTGGTACCTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181819949 29 + 182113224 -ATTCCCAGATCCTCTTACCGA-----GGGCCCCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47633358 20 + 47698779 GTCTGCAGGCTT---------------CAGTGCCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I e dasNov3.JH569290 270778 967 - 397369 I a score=162582.000000 s hg38.chr20_KI270870v1_alt 140726 11 + 183433 GTACTCACCCC s panTro5.chr20 66466897 11 + 66533130 GTACTCACCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141929 11 + 62195757 GTACTCACCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530988 11 - 578057 GTACTCACCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053166 11 - 110113093 GTACTCACCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787057 11 - 92844088 GTACTCACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453112 11 + 96509753 GTACTCACCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924141 11 - 16982598 GTACTCACCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726888 11 - 3785965 GTACTCACCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305098 11 - 90373283 GTACTCACCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119708 11 - 179258 GTACTCACCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595232 11 - 5823884 GTACTCACCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77096 11 + 372756 GTACTCATCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312490 11 + 16356641 GTACTCATCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181396 11 + 1231380 GTACTCATCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713009 11 + 11732439 GTACTCATCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56893797 11 + 57149010 GTCCTCACCTC i micMur3.chr18 C 0 I 1 s otoGar3.GL873542 22877238 11 + 22939663 ATCCTCACCTC i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181819978 11 + 182113224 GTGGTCACCTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47633378 11 + 47698779 GTGCTCACCTC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 271745 11 - 397369 GCACCCACTTC i dasNov3.JH569290 I 967 I 1 e proCoq1.NW_012150197v1 1888122 466 - 2029793 I a score=4771580.000000 s hg38.chr20_KI270870v1_alt 140737 247 + 183433 GGCCTCTCT-GTACCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTCGGTCACATCAGCGGGAAATACGCCTCTCACAGGAGCGCATCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGGTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAATGAAGGACCGACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT s panTro5.chr20 66466908 247 + 66533130 GGCCTCTCT-GTACCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTCGGTCACATCAGCGGGAAATACGCCTCTCACAGGAGCGCATCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGGTCCCTCAATGGCTCATCATTCTCCTGGAAGTCCCTGAAGAACGAAGGACCGACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62141940 247 + 62195757 GGCCTCTCT-GTACCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTCGGTCACATCAGCGGGAAATACGCCTCTCACAGGAGCGCATCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGGTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAACGAAGGACCGACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 530999 247 - 578057 GGCCTCTCT-GTACCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTCGGTCACATCAGCGGGAAATACGCCTCTCACAGGAGCGCATCCGGCTGCCCGCTGGCCGCCCGCAGGCAGAAGGAAGGGTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAACGAAGGACCGACCTGCCCCACCCCAGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053177 247 - 110113093 GGCCTTTCT-GCACCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGCGGGAAATACGCCTCTCACAGGAGCGCATCCGGCTGCCCATTGGCTGCCCGCAGGCAGAAGGAGGGTTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAACGAGGGACCGACCTGCCCCACCCCGGGCTGTGATGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787068 247 - 92844088 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGTGGAAAATACGCCTCTCACAGGAGCGCGTCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGTTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAATGAAGGACCGACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453123 247 + 96509753 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGTGGAAAATACGCCTCTCACAGGAGCGCGTCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGTTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAATGAAGGACCGACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924152 247 - 16982598 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGTGGAAAATACGCCTCTCACAGGAGCGCGTCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGTTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAATGAAGGACCGACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3726899 247 - 3785965 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGTGGAAAATACGCCTCTCACAGGAGCGCGTCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGTTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAATGAAGGACCGACCTGCCCCACCCCAGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305109 247 - 90373283 GGCCTTTCT-GTGCTCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGCGGAAAATACGCCTCTCACAGGAGCGCGTCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGTTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAATGAAGGACCGACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119719 247 - 179258 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGTGGAAAATACGCCTCTCACAGGAGCGCGTCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGTTCCCTCAATGGCTCGTCATTCTCCTGGAAGTCCCTGAAGAATGAAGGACCGACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595243 247 - 5823884 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGCGGAAAATACGCCTCTCACAGGAGCGCGTCCGGCTGCCCACTGGCCGCCCGCAGGCAGAAGGAAGGTTCCCTCAATGGCTCTTCATTCTCCTGGAAGTCCCTGAAGAATGAAGGACCGACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77107 247 + 372756 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGCGGAAAATACGCCTCTCACAGGAGTGCCTCTGGCTGCCCACTGGCCGCCCGGAGGCAGAAGGAAGGTTCCCTCAATGGCTCATCGTTCTCCTGGAAGTCCCTGAAGAACGAAGGCCCAACCTGCCCCACCCCGGGCTGTGATGGCTCTGGCCATGCCAATGGGAGTTTCCTTACCCACCGGAGGTAAGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312501 247 + 16356641 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGCGGAAAATACGCCTCTCACAGGAGTGCGTCCGGCTGCCCACTGGCCGCCCGGAGGCAGAAGGAAGGTTCCCTCAATGGCTCATCATTCTCCTGGAAGTCCCTGAAGAACGAAGGCCCAACCTGCCCCACCCCGGGCTGTGATGGCTCTGGCCACGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181407 247 + 1231380 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGCGGAAAATACGCCTCTCACAGGAGTGCGTCCGGCTGCCCACTGGCTGCCCGGAGGCAGAAGGAAGGTTCCCTCAATGGCTCATCATTCTCCTGGAAGTCCCTGAAGAACGAAGGCCCAACCTGCCCCACCCCAGGCTGCGATGGCTCCGGCCATGCCAATGGGAGTTTCCTCACCCACCGGAGGTAACTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713020 247 + 11732439 GGCCTTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTCGGTCACATCAGCGGAAAATACGCCTCACACAGGAGTGCGTCCGGCTGCCCGCTGGCCGCCCGGAGGCAGAAGGAAGGTTCCCTCAATGGCTCATCGTTCTCCTGGAAGTCCCTGAAGAACGAAGGCCCAACCTGCCCCACCCCGGGCTGTGACGGCTCTGGCCACGCCAACGGGAGTTTCCTCACCCACCGGAGGTAACGGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56893809 247 + 57149010 GGCCTTTCT-GCGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCACATCAGCGGCAAATACGCCTCCCACAGAAGTGCATCTGGCTGCCCGCTGGCTGCCCGGAGGCAGAAAGAAGGTTCCCTCAATGGCTCGTCGTTCTCCTGGAAGTCCCTGAAGAACGAGGGGCCAACCTGCCCCACCCCCGGCTGCGACGGCTCTGGCCACGCCAACGGGAGCTTCCTCACCCACCGAAGGTAACTGT i micMur3.chr18 I 1 I 949 s proCoq1.NW_012150197v1 1888588 247 - 2029793 GGCCTTTCT-GTGCCCAGGTGCCCGGTTCCAGGCTGCGTGGGGCTCGGTCACATCAGTGGTAAATACGCCTCTCACAGAAGTGCGTCTGGCTGCCCGCTGGCTGCCCGGAGGCAGAAAGAAGGTTCCCTCAACGGCTCGTCGTTCTCCTGGAAGTCCCTGAAGAACGAGGGGCCGACCTGCCCCACCCCCGGCTGTGACGGCTCTGGCCATGCCAACGGGAGCTTCCTCACCCACCGCAGGTAACTGT i proCoq1.NW_012150197v1 I 466 I 503 s otoGar3.GL873542 22877250 247 + 22939663 GGATCTTCT-GTGCCCAGGTGCCCAGTTCCAGGCTGTGTGGGGCTTGGTCATATCAGTGGCAAATATGCCTCTCACAGAAGTGCATCGGGCTGCCCACTGGCTGCCCGGAGGCAGAAAGAAGGTTCCCTCAATGGCTCGTCATTCTCTTGGAAGTCACTAAAGAACGAGGGGCCAACCTGCCCCACCCCAGGCTGTGATGGCTCTGGCCATGCCAATGGGAGCTTTCTTACTCACAGAAGGTAACTAT i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181819989 246 + 182113224 AGTCTTTCT-GTGTCTAGGTGCCCAGTTCCAGGCTGTGTGGGGCTCGGCCACATCAGCGGCAAATATGCCTCTCACAGGAGTGCTTCTGGCTGCCCACTGGCTGCTCGGAGGCAGAAAGAGGGAGCTCTCAATGGTTCATCTTTCTCGTGGAAGTCGCTGAAGAATGAGGGCCCTACTTGCCCCACCCCAGGTTGCGACGGCTCTGGCCATGCCAACGGCAGTTTCCTCACCCACCGAAGGTACCTG- i mm10.chr2 C 0 C 0 s canFam3.chr24 47633390 239 + 47698779 GACCTCTGC-G---CCAGGTGCCCTGTTCCAGGCTGCGTGGGGCTCGGTCACATCAGCGGCAAATACGCCTCACACAGAAGCGCATCTGGCTGCCCACTGGCCGCTCGGAGGCAGAAAGAGGGCTCGCTTAACGGCTCACCCTTTTCCTGGAAATCGCTGAAGAATGAGGGGCCCACCTGTCCCACCCCGGGCTGTGACGGCTCCGGCCACGCCAACGGCAGCTTCCTCACCCACAGGAGGTA----- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 271757 248 - 397369 GGCCTCTTTCATGTGCAGGTGCCCGGTTCCAGGCTGCGTGGGGCTTGGCCACATAAGTGGCAAGTATGCCTCTCACAGAAGTGCGTCTGGCTGCCCGCTGGCTGCCCGGAGGCAGAAGGAGGGCTCCCTCAATGGCTCGCCCCTCTCCTGGAAGTCGCTGAGGAACGAGGGGCACACGTGCCCCACTCCTGGCTGCGACGGCTCTGGCCACGCCAACGGGAGCTTCCTCACTCACCGAAGGTGACTGC i dasNov3.JH569290 I 1 C 0 a score=522862.000000 s hg38.chr20_KI270870v1_alt 140984 85 + 183433 GCCTGCAGGTCCTGCCCC-TCTGTGCAGTCAGTAGGGACCCTCGCCTGGGGCCTGGGGCTGAAGCTCCTG---AGGGAGGGCCAGACCA s panTro5.chr20 66467155 85 + 66533130 GCCTGCAGGTCCTGCCCC-TCTGTGCAGTCCGTAGGGACCCTCGCCTGGGGCCTGGGGCTGAAGCTCCTG---AGGGAGGGCCAGACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62142187 85 + 62195757 GCCTGCAGGTCCTGCCCC-TCTGTGCAGTCAGTAGGGACCCTCGCCTGGGGCCTGGGGCTGAAGCTCCTG---AGGGAGGGCCAGACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531246 85 - 578057 GCCTGCAGGTCCTGCCCC-TCTGTGCAGTCAGTAGGGACCCTCGCCTGGGGCCTGGGGCTGAAGCTCCTG---AGGGAGGGCCAGACCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053424 85 - 110113093 GCCTGCAGGTCCTGCCCC-TCTGTGCAGTCAGTGGGGACCCTCGCCTGGGGCCTGGGGCTGAAGCTCCTG---AGGGAGGGCCAGACCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787315 69 - 92844088 GCCTGCAGGCCCTGCCCC-TC--TGCAGTCAGTAGGGACCCTTGCCTGGGGCCTGGGGCTGAA-----------------GCCAGACCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453370 69 + 96509753 GCCTGCAGGCCCTGCCCC-TC--TGCAGTCAGTAGGGACCCTTGCCTGGGGCCTGGGGCTGAA-----------------GCCAGACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924399 69 - 16982598 GCCTGCAGGCCCTGCCCC-TC--TGCAGTCAGTAGGGACCCTTGCCTGGGGCCTGGGGCTGAA-----------------GCCAGACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3727146 69 - 3785965 GCCTGCAGGCCCTGCCCC-TC--TGCAGTCAGTAGGGACCCTTGCCTGGGGCCTGGGGCTGAA-----------------GCCAGACCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305356 69 - 90373283 GCCTGCAGGCCCTGCCCC-TC--TGCAGTCAGTAGGGACCCTTGCCTGGGGCCTGGGGCTGAA-----------------GCCAGACCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 119966 69 - 179258 GCCTGCAGGCCCTGCCCC-TC--TGCAGTCAGTAGGGACCCTTGCCTGGGGCCTGGGGCTGAA-----------------GCCAGACCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595490 69 - 5823884 GCCTGCAGGCCCTGCCCC-TC--TGCAGTCAGTAGGGACCCTCGCCTGGGGCCAGGGGCTGAA-----------------GCCAGACCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77354 85 + 372756 GCCTGCACTCCCTGCCCC-TCTGTGCTCCCAGAGGGGACCCTCACCTGGGCGCTGGGGCTGAAGCTCCTG---AGGGAGGGCCAGACCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312748 85 + 16356641 GCCTGCACCCCCTGCCCC-TTGGTGCTCTCAGAGGGGACCCTTGCCTGGGGGCTGGGGCTGAAGCTCCTG---AGGGAGGGCCAGACCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181654 63 + 1231380 ACCCGCACCCCCTGC-----------------------CCCTCGCCTGGGGGCTGGGGCTGAAGCTCCTG---AGGGAGGGCCAGACCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713267 82 + 11732439 GCCTGCACCCCCCGCCCC-TCTG-GCTCTCAGTGGGA-CCCTCGCCTGGGGACTGGGGCTGAAGGTCCTG---AGGGAGGGCCAGA-CA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22877497 84 + 22939663 ACCCCCTCACCCTTCCCTGTCTGTGCAGTAAGCAGGGACCCTGATTTGGTGCTGAGGGAAGAC--TTCTG---AGGGAAACCCAGACAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181820235 66 + 182113224 -----------ACACACG-TC--AACAACAATCAGGGGCCTTT------GGTCTGGAACGTTA-CTCCTG--TTGGTGGGAGCATGCTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47633629 29 + 47698779 ------------------------------------------------------GGGGCCGCG----CTGGTCAGGAAGGGCC--GCGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 272005 64 - 397369 -----CGAGGCATGGCAT-----AGCAGctcgtgg---ccct----tgggctctggggatgaggc--------aggcagggcaaggcca i dasNov3.JH569290 C 0 I 437 e proCoq1.NW_012150197v1 1888835 503 - 2029793 I e micMur3.chr18 56894056 949 + 57149010 I a score=390943.000000 s hg38.chr20_KI270870v1_alt 141069 37 + 183433 GGGCTCCGTGTGA-CCAG--AGTTGCTCAAGGGAAAGGCC---- s panTro5.chr20 66467240 37 + 66533130 GGGCTCCGTGTGA-CCAG--AGTTGCTCAAGGGAAAGGCC---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62142272 38 + 62195757 GGGCTCCGTGTGACCCAG--AGTTGCTCAAGGGAAAGGCC---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531331 37 - 578057 GGGCTCCGTGTGA-CCAG--AGTTGCTCAAGGGAAAGGCC---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053509 35 - 110113093 GGGCTCTGTGTGA-CC----AGTTTCTCAAGGGAAAGGCC---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787384 37 - 92844088 GGGCTCCGTGTGA-CCAA--AGTTTCTCAAGGGAAAGGCC---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453439 37 + 96509753 GGGCTCCGTGTGA-CCAA--AGTTTCTCAAGGGAAAGGCC---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924468 36 - 16982598 GGGCTCCGTGTGA-CC-A--AGTTTCTCAAGGGAAAGGCC---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3727215 37 - 3785965 GGGCTCCGTGTGA-CCAA--AGTTTCTCAAGGGAAAGGCC---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305425 37 - 90373283 GGGCTCCGTGTGA-CCAC--AGTTTCTCAAGGGAAAGGCC---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120035 37 - 179258 GGGCTCCGTGTGA-CCAA--AGTTTCTCAAGGGAAAGGCC---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595559 37 - 5823884 GCACTCCGTGTGA-CCAA--AGGTTCTCAAGGGAAAGGCC---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77439 37 + 372756 GGGCTCAGTGTGA-CCCA--AGTTTCTCAAGGGAAAGGCA---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312833 37 + 16356641 GGGCTCAGTGTGA-CCCA--GGTTTCTTGAGGGAAAGGCA---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181717 37 + 1231380 GGGCTCAGTGTGA-CCCA--GGTTTCTCAAGGGAAAGGCA---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713349 37 + 11732439 GGGCTCAGTGTGA-CCCG--AGTCTCTCAAGGGAAAGGCC---- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22877581 37 + 22939663 GGGCTCTGTATGA-CCAG--AGATTCTCAAGGGAAAGGCC---- i otoGar3.GL873542 C 0 I 188 s mm10.chr2 181820301 37 + 182113224 GTACTTAGTGGGA-ACAGC-AGTTCTGCAAGGGAAAGCA----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47633658 43 + 47698779 GGGCTCTGCGGCA-GCCGCTAGTTCTCCGGGGGAGAGGGGGCCC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1888835 503 - 2029793 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I a score=883764.000000 s hg38.chr20_KI270870v1_alt 141106 98 + 183433 AGGCCACA-TGGGTAGC-GGATGG-GGGAGGCTAGCGGGTC----T--GTTGGTGCCAGGTGATGCTGTGGGTTATGTCTTCGCCATGCGTCTCCCCTCATACGCCA s panTro5.chr20 66467277 98 + 66533130 AGGCCACA-TGGGTAGC-GGATGG-GGGAGGCTAGCGGGTC----T--GTTGGTGCCAGGTGATGCTGTGGGTTATGTCTTCGCCATGCGTCTCCCCTCATAAGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62142310 98 + 62195757 AGGCCACA-TGTGTAGC-GGATGG-GGGAGGCTAGCGGGTC----T--GTTGGTGCCGGGTGATGCTGTGGGTTATGTCTTCGCCATGCGTCTCCCCTCAGAAGCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531368 98 - 578057 AGGCCACA-CGGGTAGT-GGACGG-GGGAGGCTAGTGGGTC----T--GTTGGTACCAGGTGATGCTGTGGGTTATGTCTTCGCCATGCGTCTCCCCTCATAAGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053544 98 - 110113093 AGGCCGCA-TGGGTAGC-GGATGG-CGGAGGCTAGCAGGTC----T--GTTGGTGCCAGGTGATGCTGTGGGTTATGTCTTCGCCATGCGTCTCCCGTCATAAGCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787421 97 - 92844088 AGGCCACA-TGGGTAGC-GGATGG-GGGAGGCTGGCGGGTC----T--GTT-GTGCCAGGTGATGCTGTTGGTTACGTCTTCACCATGCGTCTTCCCTCATAAGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453476 97 + 96509753 AGGCCACA-TGGGTAGC-GGATGG-GGGAGGCTGGCGGGTC----T--GTT-GTGCCAGGTGATGCTGTTGGTTATGTCTTCACCATGCGTCTTCCCTCATAAGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924504 97 - 16982598 AGGCCACA-TGGGTAGC-GGATGG-GGGAGGCTGGCGGGTC----T--GTT-GTGCCAGGTGATGCTGTTGGTTATGTCTTCACCATGCGTCTTCCCTCATAAGCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3727252 97 - 3785965 AGGCCACA-TGGGTAGC-GAATGG-GGGAGGCTAGCGTGTC----T--GTT-GTGCCAGGTGATGCTGTTGGTTATGTCTTCACTATGCATCTTCCCTCATAAGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305462 97 - 90373283 AGGCCACA-TGGGTAGC-GGATGG-GGGAGGCTAGTGGGTC----T--GTT-GTGCCAGGTGATGCTGTTGGTTATGTCTTCACCATGCGTCTTCCCTCATAAGCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120072 97 - 179258 AGGCCACA-TGGGTAGC-GGATGG-GGGAGGCTAGCGGGTC----T--GTT-GTGCCAGGTGATGCTCTTGGTTATGTCTTCACCATGCGTCTTCCCTCATAAGCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595596 97 - 5823884 AGGCCACA-TGGGTAGC-GGCTGG-GGGAGGCTAGTGGGTC----C--GTT-GTGCCAGGTGATGCTGTTGGTTATGTCTTCGCCATGCGTCTTCCCTCACAAGCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77476 95 + 372756 AGGCCACA-TGGGTAGT-GCCTGG-GGCAGGGTTA-GGGTC----T--GTTGGTGCCGGGTGATGGTGTTGGCCGTGTCTTTGCCATGCGTCTCCCATCATGAGC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312870 98 + 16356641 AGGCCTCA-TGGGTCGT-ACCTGG-GGCAGGCCAGCGGGTC----C--GTTGGTGCCAGGTGAGGGTGTCGGCAGTGTCTTCTCCATGTGTCTCCCGTCATGAGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181754 98 + 1231380 AGGCCACA-TGGGTAGT-GCCTGG-GGCAGGCTAGTGGGTC----T--GTCGGTGCCAGGTGATGGCATCGGCAGTGTCTTTGCCATGTGTCTCCCGTCGTGAGTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713386 94 + 11732439 AGGCCACG-TGGGTAGT-GCCTGG-GGCAGGCCAG-CGGTC----T--GTTGGTGCCGGGCGATGGTGTCGGC---GTCTTTGCCAGGCGTCTCCCGCCATGAGCCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22877806 100 + 22939663 AGGCCAAA-TGGGTAGC-TGATGGAGGGAAGCCAAAGAATC----TCGGTTGGTGCTGGGAGATGGTGTTGGCTGCATTTGTACCATGTATCTGCTCTCATAGCCT- i otoGar3.GL873542 I 188 C 0 s mm10.chr2 181820338 97 + 182113224 AGACCCCAGTAGGTAGCTAAATAA-GAGAAATTATGGAGAC----T--ATTGGTACAA---GATAGTGTTTGCTTTGTTTTCAGCATGTGTTTGTTCCTGTAAGTGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47633701 85 + 47698779 GGTCCAGG-CAAGCCAC-AGACAA-CGGTGGGTCCCAGGTCCCGGT--ATTTGCGACATGTGGCCCTG----------------CACGTGGCTGCTGTCGTGAGGC- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1888835 503 - 2029793 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I a score=1509719.000000 s hg38.chr20_KI270870v1_alt 141204 127 + 183433 CCCTTCCACATCCTGATG--GAGTCCTTCCTGGCTGGGTGTTATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGACACTTACGTTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- s panTro5.chr20 66467375 127 + 66533130 CCCTTCCACATCCTGATG--GAGTCCTTCCTGGCTGGGTGTTATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGACACTTACGCTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62142408 127 + 62195757 CCCTTCCACATCCTGATG--GAGTCCTTCCTGGCTGGGTGTTATGCTGGACACAGAGGCCGCACATGAGCAGAGCCCCGGGTCTGACACTTACGTTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531466 127 - 578057 CCCTTCCACATCCTGATG--GAGTCCTTCCTGGCTGGGTGTTATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGACACTTACGTTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053642 124 - 110113093 CCCTTCCACATCC---TG--GAGTCCTTCCTGGCTGGGTGTTATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGACACTTACGTTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787518 123 - 92844088 CCCTTCCCCATCCTGATG--GAGCCCTTCCAGGCTGGGTGTTATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGAC----ACGTTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453573 121 + 96509753 CCCTTCCCCATCCTGATG--GAGCCCTTCCAGGCTGGGTGTTATGCTGG--ACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGAC----ACATTCTCTTAACAGGCTGACAACTTCTCAGGAACAGT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924601 123 - 16982598 CCCTTCCCCATCCTGATG--GAGCCCTTCCAGGCTGGGTGTTATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGAC----ACGTTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3727349 123 - 3785965 CCCTTCCCCATCCTGATG--GAGCCCTTCCAGGCTGGGTGTTATGCTGGACACAGAGGCCACACGTGAGCAGAGCCCTGGGTCTGAC----ACGTTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305559 123 - 90373283 CCCTTCCACAGCCTGTGG--GAGTCCTTCCAGGCTGGGTGTTACGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGAC----ACGTTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120169 123 - 179258 CCCTTCCCCATCCTGATG--GAGCCCTTCCAGGCTGGGTGTTATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGAC----ACGTTCTCTTAACAGGCTGACAACTTCTCAGGAAAAGT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595693 123 - 5823884 CCCTTCCACATCCTGATG--GAGTCCTTCCAGGCTGGGTGCGATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGAC----ATGTTCTCTCAGCAGGCTGACAACTTCGCAGGAAAAGT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77571 121 + 372756 --CTTCCACATCCTGATG--GAGCCCTTCCAGGCTGGGTGTCATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGAC----ATGTTCTCTTATCAGGCTGACAACTTCTTAGGAAAGGT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16312968 123 + 16356641 CGCTTCCACATCCTGATG--GAGTCCCTCCAGGCTGGGTGTTAGGCTGGACACAGAGGCCACACGTGAGCACAGCCCTGGGTCTGAC----ATGTTCTCTTACCAGGCTGACGACTTCTCAGGAAAAGT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181852 123 + 1231380 TCCTTCCACGTCCTGGTG--GAGTCCTTCCAGGCTGGGTGTTATGCTGGACACAGAGGCCACACATGAGCAGAGCCCTGGGTCTGAC----ACGTTCTCTTATCAGGCTGACAACTTCTTAGGAAAAGT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713480 123 + 11732439 TCCTTCCACATCCTGATG--GAGTCCTTCCAGGCTGGGTGTTATGCTGGACACAGAGGCCACACGTGAGCAGAGCCCTGGGTCTGAC----ACGTTCTCTTATCAGGCTCACAGCCTCTTAGGAAAAGT- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1889338 119 - 2029793 CCCTCCCACATCCTCACG--GAGTCCCCCCGGGCTGGGTGTTGTGCTGGACATGGAGGCCACACGTGAGCAGAGCCTTGTGTCTGACACGCAGGTTCTCTTAA--------CAACTTCTCAGGAAAAGT- i proCoq1.NW_012150197v1 I 503 C 0 s otoGar3.GL873542 22877906 125 + 22939663 CCCTCCCACATCCTCAGG--AGGT--CTCTGGGCTGGGTGCTCTGCTGGACGTGGAGGCCACACATGAGCAGGGCTGTGTGTCTGATACTCACATTCTCTTAATGAGCTGCCAAGTCCTCTGGACAAGT- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181820435 108 + 182113224 --CCTCTGTACCCTGGTGTTTATTGTCCCCATGAGCATTGTTAGGTTAAATACAGAGGCCGTGCATGAACAG-------------------ACTCTGTCTTTACTCATATTTGATTTCTCAGGAAAAGT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47633786 87 + 47698779 CCCCTCCACA-----GTG--TAGTCCCTGCAG--------------------CAAGAGCC-------AGCGGAGCCCTGAGT---------GTGTTCTTGACACAGGCTGCAGGCTTCTCACGGAAAGCT i canFam3.chr24 C 0 C 0 e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I a score=80639.000000 s hg38.chr20_KI270870v1_alt 141331 9 + 183433 TTGTCTCC-T s panTro5.chr20 66467502 9 + 66533130 TTGTCTCC-T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62142535 9 + 62195757 TTGTCTCC-T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531593 9 - 578057 TTGTCTCC-T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053766 9 - 110113093 TTGTCTCC-T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787641 10 - 92844088 GTGTCTCCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453694 9 + 96509753 GTGTCTCC-T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924724 9 - 16982598 GTGTCTCC-T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3727472 9 - 3785965 GTGTCTCC-T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305682 9 - 90373283 GTGTCTCC-T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120292 9 - 179258 GTGTCTCC-T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595816 9 - 5823884 GTGTCTCC-T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77692 9 + 372756 TTGTTTCC-T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313091 6 + 16356641 ---TTTCC-T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181975 9 + 1231380 TTGTTTCC-T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713603 9 + 11732439 TTGTTTCC-T i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1889457 9 - 2029793 TTTTCTCC-T i proCoq1.NW_012150197v1 C 0 I 273 s mm10.chr2 181820543 9 + 182113224 TTGTTTCC-T i mm10.chr2 C 0 C 0 s canFam3.chr24 47633873 5 + 47698779 TTGTC----- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=126928.000000 s hg38.chr20_KI270870v1_alt 141340 23 + 183433 ACACCTT-ATGCCCTGTCCCTCCC---- s panTro5.chr20 66467511 19 + 66533130 ACACCTT-ATGCCCTGTCCC-------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62142544 19 + 62195757 ACACCTT-ATGCCCTGTCCC-------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531602 18 - 578057 GCACCTT-ATGCCCTGTCC--------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053775 19 - 110113093 ACAGCTA-ATGCCCTGTCCC-------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787651 19 - 92844088 ACACCTT-TTGCCCTGTCTC-------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453703 19 + 96509753 ACACCTT-TTGCCCTGTCTC-------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924733 19 - 16982598 ACACCTT-TTGCCCTGTCTC-------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3727481 19 - 3785965 ACACCTT-TTGCCCTGTCTC-------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305691 19 - 90373283 ACACCCT-TTGCCCTGTGTC-------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120301 19 - 179258 ACACCTT-TTGCCCTGTCTC-------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595825 19 - 5823884 ACACCTT-TTGCCGTGTCTC-------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77701 18 + 372756 AACCCTT-ATGCCCTGCCC--------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313097 15 + 16356641 ATACCTT-ATGCCCTG------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1181984 18 + 1231380 ATCCCTT-ATGCCCTGCCC--------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713612 18 + 11732439 AAACTTT-ATGCCCTGCCT--------- i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181820552 20 + 182113224 ATACCTTGGTTCCCTACCTC-------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47633878 23 + 47698779 GTACCTC-GTGCCCTGCCCC----TCCC i canFam3.chr24 C 0 I 512 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=146757.000000 s hg38.chr20_KI270870v1_alt 141363 71 + 183433 ATTCATACCTTCTCAGGAAAAGTTTGTCTCCTACACCTTATGCCCTGTCCGTCCCATTCATGCCTCTTCTT s panTro5.chr20 66467530 20 + 66533130 ---------------------------------------------------TCCCATTCATGCCTCTTCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62142563 20 + 62195757 ---------------------------------------------------TCCCATTCATGCCTCTTCTT i panPan2.chr20 C 0 I 308 s gorGor5.CYUI01015848v1 531620 20 - 578057 ---------------------------------------------------TCCCATTCATGCCTCTTCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053794 20 - 110113093 ---------------------------------------------------TCCCATTCATACCTCTTCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787670 20 - 92844088 ---------------------------------------------------TCCCATGCACACCTCTTCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453722 20 + 96509753 ---------------------------------------------------TCCCATGCACACCTCTTCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924752 20 - 16982598 ---------------------------------------------------TCCCATGCACACCTCTTCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3727500 20 - 3785965 ---------------------------------------------------TCCCATGCACACCTCTTCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305710 20 - 90373283 ---------------------------------------------------TCCCATGCACACCTCTTCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120320 20 - 179258 ---------------------------------------------------TCCCATGCACACCTCTTCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595844 20 - 5823884 ---------------------------------------------------TCCCAGGCACACCTCTTCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77719 20 + 372756 ---------------------------------------------------TCCCATTCATGTGTCTTCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313112 18 + 16356641 -----------------------------------------------------CCATTCATACCTCTTCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182002 20 + 1231380 ---------------------------------------------------TCCCATTCATACCTCTTCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713630 20 + 11732439 ---------------------------------------------------TCCCATTCAGACCTCTTCTT i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181820572 19 + 182113224 ---------------------------------------------------TTACATTGGGCCCGTGTTT- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=1817769.000000 s hg38.chr20_KI270870v1_alt 141434 221 + 183433 TGAACTCTGGGCAGAGACCCCTGCCTGCCTTGCAAGGGAGCTGGT-----AACCCCTCTCTGTCAGGCAGTGGGCCTGGGCAGCATTCACCAACTCTCGCCTGCCCTCCAACACCTGCTCCAGAGCCGAA-GGACC-TTGCTTCACCAG-CCCCACTTCCTGTCTGTGTCCTATGGTGACAATGAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA s panTro5.chr20 66467550 221 + 66533130 TGAACTCTGGGCAGAGACCCCTACCTGCCTTGCAAGGGAGCTGGT-----AACCCCTCTCTGTCAGGCAGTGGGCCTGGGCAGCATTCACCAACTCTCGCCTGCCCTCCAACACCTGCTCCAGAGCTGAA-GGACC-TTGCTTCACCAG-CCCCACTTCCTGTCTGTGTCCTATGGTGACAATGAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531640 222 - 578057 TGAACTCTGGGCAGAGACCCCTGCCTGCCTTGCAAGGGAGGTGGT-----AACCCCTCTCTGTCAGGCAGTGGGCCTGGGCAGCATTCACCAACTCTTGCCTGCCCTCCAACACCTGCTCCAGAGCTGAA-GGACC-TTGCTTCACCAGCCCCCACTTCCTGTCTGTGTCCTATGGTGACAGTGAGTGCCTGGTCCCATCAGAAACCCTATGTCTGGGCCTAGGGCCAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110053814 222 - 110113093 TGAGCTCTGGGCAGAGACCCCTGCCTGCTTTGCAAGGGAGCTGGT-----GGCCCCTCGCTGTCAGGCAGTGGGCCTGGGCAGCATTCACCAACTCTTGCCTGCCCTCCAACACCTGCTCCAGAGCTGAA-GGACC-TCGCTTCACCAGCCCCCACTTCCTGTCTGTGTCCTATGGTGACAATGAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787690 221 - 92844088 TGAACTCTGGGCAGAGACCCCTGCCTGCTTTGCAA-GGAGCTGGC-----GACCCCTCACTGTCTGGCAGT-GGCCTGGGCAGCACTCACCACCTCTCACCTGCCCTCCAACACCTGCTGTGGAGCTGAG-GGACCTTTGCTTCACCAGCCCCCGCTTCCTGTGTGTGTCCTATGGCGACAATAAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453742 217 + 96509753 TGAACTCTGGGCAGAGACCCCTGCCTGCTTTGCAA-GGAGCTGGC-----GACCCCTCACTGTCTGGCAGT-GGCCTGGGCAGCACTCACCA-CTCTCACCTGCCCTCCAACACCTGCTGTGGAGCTGAG-GGACCTTTGCTTCACCAGCCCCCACTTCC--TGTGTGTCCTATGG-GACAATAAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924772 220 - 16982598 TGAACTCTGGGCAGAGACCCCTGCCTGCTTTGCAA-GGAGCTGGC-----GACCCCTCACTGTCTGGCAGT-GGCCTGGGCAGCACTCACCACCTCTCACCTGCCCTCCAACACCTGCTGTGGAACTGAG-GGACC-TTGCTTCACCAGCCCCCACTTCCTGTGTGTGTCCTATGGCGACAATAAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3727520 220 - 3785965 TGAACTCTGGGCAGAGACCCCTGCCTGCTTTGCAA-GGAGCTGGC-----GACCCCTCACTGTCTGGCAGT-GGCCTGGGCAGCACTCACCACCTCTCACCTGCCCTCCAACACCTGCTGTGGAGCTGAG-GGACC-TTGCTTCACCAGCCCCCGCTTCCTGTGTGTGTCCTATGGCGACAATAAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305730 221 - 90373283 TGAACTCTGGGCAGAGACCCCTGCCTGCTTTGCAAGGGAGCTGGC-----GACCCCTCACTGTCTGGCAGT-GGCTTGGGCAGCACTCACCACCTCTCACCTGCCCTCCGACACCTGCTGTGGAGCTGAG-GGACC-TTGCTTCACCAGCCCCCACTTCCTGTGTGTGTCCTATGGCGACAATAAGTGCCTGATCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120340 220 - 179258 TGAACTCTGGGCAGAGACCCCTGCCTGCTTTGCAA-GGAGCTGGC-----GACCCCTCACTGTCTGGCAGT-GGCCTGGGCAGCACTCACCACCTCTCACCTGCCCTCCAACACCTGCTGTGGAGCTGAG-GGACC-TTGCTTCACCAGCCCCCACTTCCTGTGTGTGTCCTATGGCGACAATAAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5595864 222 - 5823884 TGAACTCTGGGCAGAGACCCCTGCCTGCTTTGCAAGGGAGCTGGC-----GACCCCTCACTGTCTGGAGGTGGGCCTGGGCAGCACTCACCACCTCTCACCTGCCCTCCAGCACCTGCTGTGGAGCTGAG-GGACC-TTGCTTCACCAGCCCCCACTTCCCGTGTGTGTCCTGTGGCGACAATATGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77739 220 + 372756 TGAACTCTGGGCAGAGACTCCTGCCTGCTTTGCAAGGGAGCTTGT-----GACCCCTCACTGTCTGGCAGTGAGCCTGGGCAGGATTCACCAAGTCTCACCTGCCCTCCAACACCTGCCCCA-TGCTGAG-AGACC-TTGCTTCACCA-CCCTGACTTCCTGTCTGTGCCCTATGGTGACAACAAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313130 202 + 16356641 TGAACTCTGGGCAGAGACCCCTGCCTGCTTTGCAAGGGAGCTTGT-----GACCCTTTACTCTCTGGCAG---------------TCTACCAAGTCTCACCTGCCCACCAACACCTGCCCCA-TGCTGAG-AGACC-TTGCTTCACCA-CCCTGACTTCCTGTCTGTGCCCTGTGGTG---AGAAGCGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCGAGGGCCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182022 217 + 1231380 TGAACTCTGGGCAGAGACCCCTGTCTGCCTTACGAGGGGGCCTGT-----GACCCCTCACTGCCTGGCAGTGAGCCTGGGCAGGATTCACCAAGTCTCACCTGCCCTCCAACACCTGCCCCA-TGCTGAG-AGACC-CTGCTTCACCA-CCCTGACTTCTTGTCTGTGCCCTATGGTG---ACGAGTGCCTGGTCCCATCAGAAACCCTGTATCTGGGCTGAGGGCCAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2713650 219 + 11732439 TGAACTCTGGGCAGAGACCCCTGCCTGCTTTGCAAGGGAGCTTGT-----GACCCCTCACTGTCTGGCAGTGAGCCTGGGCAGGATTCACCAAGCCTCACCTGCCCTCCAACACCTGCCCT--TGCTGAG-AGACC-TTGCTTCACCA-CCCTGACTTCCTGTCTGTGCCCTATGGTGACAACAAGTGCCTGGTCCCATCAGAAACCCTGTGTCTGGGCCTAGGGCCAA i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181820591 202 + 182113224 TGAAATTTGGGCAAAGGCCCTTGCTTGCTTTGCAAGGGACCTGGTAACTAGACCTCTTCTTGTC------------TAGGCAATGCTCATT--CTATCACCTGCCCA-CAGTGCCTGCCATGGGGCTGAGTTGGCT-TTGCTTCACCAGGTCC--CTTTCCATTT-TGTTCTA--------AGAAGCCATTGATCTTGTCTAGTAACTTTTGTTTGGAGTGAAAATCAA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=317728.000000 s hg38.chr20_KI270870v1_alt 141655 37 + 183433 TGCTGACTCTTCATtccctcccctgtccctcccctcc s panTro5.chr20 66467771 37 + 66533130 TGCTGACTCTTCATTCCCTCCCCTGTccctctcctcc i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531862 37 - 578057 TGCTGACTCTTCAttccctcccctgtccctcccctcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110054036 37 - 110113093 CGCTGACTCTTCATTCCCTCCCCTGTCCCTCCCCTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787911 37 - 92844088 TGCTGACTCTTCAttccctcccctgtccctcccctcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453959 37 + 96509753 TGCTGACTCTTCATTccctcccctgtccctccctccc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16924992 37 - 16982598 TGCTGACTCTTCATTCCCTCCCCTGTCCCTCCCCTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3727740 37 - 3785965 TGCTGACTCTTCATTCCCTCCCCTGTCCCTCCCCTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305951 37 - 90373283 TGCTGACTCTTCAttccctcccctgtccctcccctcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120560 37 - 179258 TGCTGACTCttcattccctcccctgtccctcccctcc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596086 37 - 5823884 TGCTGACTCTTCATTccctcccctgtccctcccctcc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77959 30 + 372756 TG-TGACTCTTCGTTCCCTC------CCCTCCCCTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313332 37 + 16356641 TGCTGACTCTTCGTTCCCTCCCCTGTCCCTCCCCTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182239 36 + 1231380 TGCTGACTCTTCGctccctc-cccgtccctcccctcc i cebCap1.NW_016107870v1 C 0 I 137 s aotNan1.NW_018500483v1 2713869 37 + 11732439 GGCTGACTCTTCGTTccctcccctgcttccctcctcc i aotNan1.NW_018500483v1 C 0 I 3 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=9587.000000 s hg38.chr20_KI270870v1_alt 141692 4 + 183433 cctt s panTro5.chr20 66467808 4 + 66533130 cctt i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531899 4 - 578057 cctt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110054073 4 - 110113093 CCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787948 4 - 92844088 cctt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453996 3 + 96509753 ctt- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16925029 4 - 16982598 CCTT i macNem1.NW_012014244v1 C 0 I 1175 s cerAty1.NW_012001373v1 3727777 4 - 3785965 CCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305988 1 - 90373283 c--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120597 4 - 179258 cctt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596123 4 - 5823884 cctt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77989 3 + 372756 -TTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313369 3 + 16356641 -CTT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2713909 4 + 11732439 ccct i aotNan1.NW_018500483v1 I 3 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=31745.000000 s hg38.chr20_KI270870v1_alt 141696 8 + 183433 cttccctc s panTro5.chr20 66467812 8 + 66533130 cttccctc i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531903 8 - 578057 cttccctc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110054077 8 - 110113093 CTTCCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787952 8 - 92844088 tttccctc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96453999 8 + 96509753 tttccctc i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3727781 8 - 3785965 TTTCCCTC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 120601 8 - 179258 tttccctc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596127 8 - 5823884 tttccctc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77992 4 + 372756 CCTC---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313372 8 + 16356641 CCTCCCTT i saiBol1.JH378156 C 0 M 186 s aotNan1.NW_018500483v1 2713913 8 + 11732439 cctccctc i aotNan1.NW_018500483v1 C 0 I 1 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90305989 0 - 90373283 C e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=158714.000000 s hg38.chr20_KI270870v1_alt 141704 36 + 183433 ctccttcccctcccttctccctcctttcc------tcttctc- s panTro5.chr20 66467820 36 + 66533130 ctccttcccctcccttctccctcctttcc------tcttctc- i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531911 36 - 578057 ctccttcccctcccttctccctcctttcc------tcttctc- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110054085 36 - 110113093 TTCCTTCCCCTCCCTTTTCCCTCCTTTCC------TCTTCTC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787960 36 - 92844088 ctccttcctctcccttctccctcctttcc------tctcctc- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454007 36 + 96509753 ctccttcctctcccttctccctcctttcc------tctcctc- i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3727789 36 - 3785965 CTCCTTCCTCTCCCTTCTCCCTCCTTTCC------TCTCCTC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90305989 34 - 90373283 --ccttcctctcccttctccctcctttcc------tctcctc- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 120609 36 - 179258 ctctttcctctcccttctccctcctttcc------tctcctC- i manLeu1.NW_012101652v1 C 0 M 524 s colAng1.NW_012114444v1 5596135 36 - 5823884 ctccttcctctcccttctccctcctttcc------tttcctc- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 77996 27 + 372756 CTCCTTCACCT--------cctcccttct--------ccctcc i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2713922 43 + 11732439 ctccctcccctccccttcccctcccctctcacccctcccctct i aotNan1.NW_018500483v1 I 1 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e saiBol1.JH378156 16313380 186 + 16356641 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=27608.000000 s hg38.chr20_KI270870v1_alt 141740 6 + 183433 cctccc s panTro5.chr20 66467856 6 + 66533130 cctccc i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531947 6 - 578057 cctccc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110054121 6 - 110113093 CCTCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92787996 6 - 92844088 cctccc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454043 6 + 96509753 cctccc i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3727825 6 - 3785965 CCTCCC i cerAty1.NW_012001373v1 C 0 I 531 s chlSab2.chr2 90306023 6 - 90373283 cctccc i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5596171 6 - 5823884 cctccc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78023 6 + 372756 cttccc i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2713965 6 + 11732439 ctcctc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e saiBol1.JH378156 16313380 186 + 16356641 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=161017.000000 s hg38.chr20_KI270870v1_alt 141746 66 + 183433 ttcctccttccctttc-----------------cctcccctctcccctttcctcccctctcccttcccctatccctccccctt------ s panTro5.chr20 66467862 66 + 66533130 ttcctccttccctttc-----------------cctcccctctctcctttcctcccctctctcttcccctatccctccccctt------ i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 531953 66 - 578057 ttcctccttccctttc-----------------cctcccctctcccctttcctcccctctcccttcccctatccctccccctt------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110054127 83 - 110113093 TTCCTCCTTCCCTTTCCCTGCTCTGTCCCCTTTCCTCCCCTCTCCCCTTTCATCCCCTCTCCCTACCCCTATCCCTCCCCGTT------ i nomLeu3.chr13 C 0 M 571 s rheMac8.chr10 92788002 59 - 92844088 ttcctccttccctttc-----------------cctcc-------cctttcctcccctctcccttcccctatccctccccatt------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454049 59 + 96509753 ttcctccttccctttc-----------------cctcc-------cctttcctcccctctcccttcccctatccctccccatt------ i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90306029 59 - 90373283 ttcctccttccctttc-----------------cctcc-------cctttcctcccctctcccttcccctatccctccccatt------ i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5596177 59 - 5823884 ttcctcctttcctttc-----------------cctcc-------cctttcctcccctctcccttcccctgtccctccccatt------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78029 54 + 372756 cttctcctcccctctc----------------------------------ctctcactctcttctc-cctgtccctccccctctgactc i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2713971 67 + 11732439 cccctcctcccctctc-----------------ccttccctc---cccctccctccctcccctctctcccctccctccccctct--ctc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e saiBol1.JH378156 16313380 186 + 16356641 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=18780.000000 s hg38.chr20_KI270870v1_alt 141812 9 + 183433 tcct-------tcttt s panTro5.chr20 66467928 9 + 66533130 tcct-------tcttt i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532019 9 - 578057 tcct-------tcttt i gorGor5.CYUI01015848v1 C 0 I 278 s rheMac8.chr10 92788061 9 - 92844088 tcct-------tcttt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454108 9 + 96509753 tcct-------tcttt i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90306088 9 - 90373283 tcct-------tcttt i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5596236 9 - 5823884 tcct-------tcttt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78083 9 + 372756 ccct-------ccctc i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2714038 16 + 11732439 ccctcccttccccctc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e saiBol1.JH378156 16313380 186 + 16356641 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e nomLeu3.chr13 110054210 571 - 110113093 M e otoGar3.GL873542 22878031 0 + 22939663 C a score=37990.000000 s hg38.chr20_KI270870v1_alt 141821 15 + 183433 cccctcccttcccct s panTro5.chr20 66467937 15 + 66533130 cccctcccttcccct i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532306 15 - 578057 cccctcccctcccct i gorGor5.CYUI01015848v1 I 278 C 0 s rheMac8.chr10 92788070 15 - 92844088 cccctcccttcccct i rheMac8.chr10 C 0 I 17 s macFas5.chr10 96454117 15 + 96509753 cccctcccttcccct i macFas5.chr10 C 0 I 3 s chlSab2.chr2 90306097 15 - 90373283 cccctcccttcccct i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5596245 15 - 5823884 cccttcccttcccct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78092 15 + 372756 tcctacacctctcct i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2714054 15 + 11732439 ccctccctccctccc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e saiBol1.JH378156 16313380 186 + 16356641 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e nomLeu3.chr13 110054210 571 - 110113093 M e otoGar3.GL873542 22878031 0 + 22939663 C a score=28476.000000 s hg38.chr20_KI270870v1_alt 141836 19 + 183433 tcccctcccctctccttcc s panTro5.chr20 66467952 19 + 66533130 tcccctcccctctccttcc i panTro5.chr20 C 0 I 10010 s gorGor5.CYUI01015848v1 532321 19 - 578057 tcccctcccctctccctcc i gorGor5.CYUI01015848v1 C 0 I 2 s chlSab2.chr2 90306112 18 - 90373283 -cccctctccctccccttt i chlSab2.chr2 C 0 I 2 s colAng1.NW_012114444v1 5596260 19 - 5823884 tcccctcccctctccctcc i colAng1.NW_012114444v1 C 0 I 283 s calJac3.chrUn_GL286459 78107 19 + 372756 acccctcccctccccttcc i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2714069 19 + 11732439 tcccctccccctccctccc i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e saiBol1.JH378156 16313380 186 + 16356641 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e nomLeu3.chr13 110054210 571 - 110113093 M e rheMac8.chr10 92788085 17 - 92844088 I e otoGar3.GL873542 22878031 0 + 22939663 C e macFas5.chr10 96454132 3 + 96509753 I a score=43250.000000 s hg38.chr20_KI270870v1_alt 141855 98 + 183433 ttcctctcccctctcccttcccttttgcct--------cctctcccctccccttc---ccctcccctccccttcccctcccctctcctac------ccctcccctcccttccctc s gorGor5.CYUI01015848v1 532342 98 - 578057 ttcccctcccttctcccttcccttttgcct--------cctctcccctccccttc---gcctcccctcctcttcccctcccctctcctac------ccctcccctcccttccctc i gorGor5.CYUI01015848v1 I 2 C 0 s chlSab2.chr2 90306132 112 - 90373283 ttcctctccccttccctccctctctcccctccccctcccctcttccctccctctc---ccctcccctccccttcccctcccctctccttcccttttccctcctctcccctcccct i chlSab2.chr2 I 2 C 0 s calJac3.chrUn_GL286459 78126 87 + 372756 -ct---ttccctcccccttcccttttccct--------cctctcccctcttctta---ccctcccttctcctacccctcccctcccGTAT------CTTTCCTCCACC------- i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2714088 93 + 11732439 -ctcccctccctccccctt-cctcctccct--------cccttcccctccccctccctccctcccttccccccctcctccctcctcccct------cctccctcccctc------ i aotNan1.NW_018500483v1 C 0 I 49 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e colAng1.NW_012114444v1 5596279 283 - 5823884 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e saiBol1.JH378156 16313380 186 + 16356641 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e rheMac8.chr10 92788085 17 - 92844088 I e otoGar3.GL873542 22878031 0 + 22939663 C e macFas5.chr10 96454132 3 + 96509753 I a score=3518.000000 s hg38.chr20_KI270870v1_alt 141953 14 + 183433 tgcccaccccccac s gorGor5.CYUI01015848v1 532440 14 - 578057 tgcccaccccccgc i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90306244 14 - 90373283 tcccctcctctcct i chlSab2.chr2 C 0 C 0 s calJac3.chrUn_GL286459 78213 14 + 372756 TGCCCTCTCCTTTC i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e colAng1.NW_012114444v1 5596279 283 - 5823884 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e saiBol1.JH378156 16313380 186 + 16356641 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e aotNan1.NW_018500483v1 2714181 49 + 11732439 I e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e rheMac8.chr10 92788085 17 - 92844088 I e otoGar3.GL873542 22878031 0 + 22939663 C e macFas5.chr10 96454132 3 + 96509753 I a score=987.000000 s hg38.chr20_KI270870v1_alt 141967 3 + 183433 ctc s gorGor5.CYUI01015848v1 532454 3 - 578057 ctc i gorGor5.CYUI01015848v1 C 0 I 2 s chlSab2.chr2 90306258 3 - 90373283 ctt i chlSab2.chr2 C 0 C 0 s saiBol1.JH378156 16313567 3 + 16356641 CCC i saiBol1.JH378156 M 186 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e colAng1.NW_012114444v1 5596279 283 - 5823884 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142583 308 + 62195757 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e calJac3.chrUn_GL286459 78227 0 + 372756 C e aotNan1.NW_018500483v1 2714181 49 + 11732439 I e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e rheMac8.chr10 92788085 17 - 92844088 I e otoGar3.GL873542 22878031 0 + 22939663 C e macFas5.chr10 96454132 3 + 96509753 I a score=8321.000000 s hg38.chr20_KI270870v1_alt 141970 16 + 183433 ccccactccctcccca s panPan2.chr20 62142891 15 + 62195757 ccccactccctccca- i panPan2.chr20 I 308 C 0 s gorGor5.CYUI01015848v1 532459 16 - 578057 ccccactccctcccca i gorGor5.CYUI01015848v1 I 2 C 0 s chlSab2.chr2 90306261 15 - 90373283 -cccctcccctcccca i chlSab2.chr2 C 0 C 0 s calJac3.chrUn_GL286459 78227 8 + 372756 --------CTTCCCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313570 16 + 16356641 CTCCTTTCCTTCCCCC i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e colAng1.NW_012114444v1 5596279 283 - 5823884 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e macNem1.NW_012014244v1 16925033 1175 - 16982598 I e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e aotNan1.NW_018500483v1 2714181 49 + 11732439 I e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e rheMac8.chr10 92788085 17 - 92844088 I e otoGar3.GL873542 22878031 0 + 22939663 C e macFas5.chr10 96454132 3 + 96509753 I a score=1000.000000 s hg38.chr20_KI270870v1_alt 141986 1 + 183433 c s macNem1.NW_012014244v1 16926208 1 - 16982598 c i macNem1.NW_012014244v1 I 1175 C 0 s chlSab2.chr2 90306276 1 - 90373283 c i chlSab2.chr2 C 0 C 0 s calJac3.chrUn_GL286459 78235 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313586 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e colAng1.NW_012114444v1 5596279 283 - 5823884 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62142906 0 + 62195757 C e gorGor5.CYUI01015848v1 532475 0 - 578057 C e manLeu1.NW_012101652v1 120645 524 - 179258 M e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e aotNan1.NW_018500483v1 2714181 49 + 11732439 I e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e rheMac8.chr10 92788085 17 - 92844088 I e otoGar3.GL873542 22878031 0 + 22939663 C e macFas5.chr10 96454132 3 + 96509753 I a score=4341.000000 s hg38.chr20_KI270870v1_alt 141987 7 + 183433 cccctct s panPan2.chr20 62142906 7 + 62195757 cccctct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532475 7 - 578057 cccctct i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96454135 6 + 96509753 -ctctcc i macFas5.chr10 I 3 C 0 s macNem1.NW_012014244v1 16926209 6 - 16982598 -cccccc i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90306277 7 - 90373283 cccctct i chlSab2.chr2 C 0 C 0 s calJac3.chrUn_GL286459 78236 6 + 372756 TTActc- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313587 6 + 16356641 TTCctc- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e colAng1.NW_012114444v1 5596279 283 - 5823884 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e cebCap1.NW_016107870v1 1182275 137 + 1231380 I e aotNan1.NW_018500483v1 2714181 49 + 11732439 I e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e rheMac8.chr10 92788085 17 - 92844088 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=9883.000000 s hg38.chr20_KI270870v1_alt 141994 7 + 183433 cctcccc- s panPan2.chr20 62142913 6 + 62195757 cctccc-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532482 6 - 578057 cctccc-- i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96454141 6 + 96509753 ctcccc-- i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16926215 6 - 16982598 cccccc-- i macNem1.NW_012014244v1 C 0 I 2 s chlSab2.chr2 90306284 6 - 90373283 cctccc-- i chlSab2.chr2 C 0 I 1 s calJac3.chrUn_GL286459 78242 7 + 372756 cctccc-c i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313593 7 + 16356641 cctccc-c i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182412 7 + 1231380 cctccc-c i cebCap1.NW_016107870v1 I 137 C 0 s aotNan1.NW_018500483v1 2714230 7 + 11732439 cctccc-c i aotNan1.NW_018500483v1 I 49 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e colAng1.NW_012114444v1 5596279 283 - 5823884 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e rheMac8.chr10 92788085 17 - 92844088 I e otoGar3.GL873542 22878031 0 + 22939663 C a score=90408.000000 s hg38.chr20_KI270870v1_alt 142001 26 + 183433 ttcttcctctcccc-tcccctcccccc s panPan2.chr20 62142919 25 + 62195757 ttcttcctctcccc-tcccctccccc- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532488 21 - 578057 ttcttcctctcccc-tccccac----- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92788102 27 - 92844088 ttcttcctctccccttcccttcccccc i rheMac8.chr10 I 17 C 0 s macFas5.chr10 96454149 27 + 96509753 ttcttcctctccccttcccttcccccc i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16926223 26 - 16982598 ttcttcctctcccc-tcccttcccccc i macNem1.NW_012014244v1 I 2 C 0 s chlSab2.chr2 90306291 26 - 90373283 ttcttcctctcccc-tcccttcccccc i chlSab2.chr2 I 1 C 0 s calJac3.chrUn_GL286459 78249 27 + 372756 ttcttcctctccctctcccctcccacc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313600 27 + 16356641 gtcttcctctccctctcccctcccacc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182419 27 + 1231380 ttcctcctctccctctcccctcccatc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714237 27 + 11732439 ttcttcctctccctctcccctcccaca i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e colAng1.NW_012114444v1 5596279 283 - 5823884 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e otoGar3.GL873542 22878031 0 + 22939663 C a score=12537.000000 s hg38.chr20_KI270870v1_alt 142027 3 + 183433 tca s panPan2.chr20 62142944 3 + 62195757 tca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532509 3 - 578057 tca i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92788129 3 - 92844088 tga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454176 3 + 96509753 tga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926249 3 - 16982598 tga i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90306317 3 - 90373283 tca i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5596562 3 - 5823884 tca i colAng1.NW_012114444v1 I 283 C 0 s calJac3.chrUn_GL286459 78276 3 + 372756 tca i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313627 3 + 16356641 tca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182446 3 + 1231380 tca i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714264 3 + 11732439 tca i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3727831 531 - 3785965 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e otoGar3.GL873542 22878031 0 + 22939663 C a score=68094.000000 s hg38.chr20_KI270870v1_alt 142030 9 + 183433 ccttcccct s panPan2.chr20 62142947 9 + 62195757 ccttcccct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532512 9 - 578057 ccttcccct i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92788132 9 - 92844088 ccttcccct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454179 9 + 96509753 ccttcccct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926252 9 - 16982598 ccttcccct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728362 9 - 3785965 ccttcccct i cerAty1.NW_012001373v1 I 531 C 0 s chlSab2.chr2 90306320 9 - 90373283 ccttcccct i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5596565 9 - 5823884 ccttcccct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78279 9 + 372756 ccttcccct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313630 9 + 16356641 ccttcccct i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182449 9 + 1231380 ccttcccct i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714267 9 + 11732439 ccttcccct i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181820793 0 + 182113224 C e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e otoGar3.GL873542 22878031 0 + 22939663 C a score=25688.000000 s hg38.chr20_KI270870v1_alt 142039 12 + 183433 tccct--tccccc--a s panPan2.chr20 62142956 12 + 62195757 tccct--tccccc--a i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532521 12 - 578057 tccct--tccccc--a i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92788141 11 - 92844088 tccct--tccctc--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454188 11 + 96509753 tccct--tccctc--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926261 11 - 16982598 tccct--tccctc--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728371 11 - 3785965 tccct--tccctc--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306329 12 - 90373283 tccct--tctctcc-- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5596574 12 - 5823884 tccct--tccctc-c- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78288 9 + 372756 ttcct--tccc----- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313639 9 + 16356641 ttcct--tccc----- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182458 9 + 1231380 ttcct--tccc----- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714276 9 + 11732439 ttcct--tccc----- i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181820793 12 + 182113224 TTCCTAGTCCCt---- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 120645 524 - 179258 M e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e otoGar3.GL873542 22878031 0 + 22939663 C a score=102708.000000 s hg38.chr20_KI270870v1_alt 142051 19 + 183433 ccttcctccccttctcttc s panPan2.chr20 62142968 19 + 62195757 ccttcctccccttctcttc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532533 19 - 578057 acttcctccccttctcttc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92788152 19 - 92844088 ccttcctcaccttctcttc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454199 19 + 96509753 ccttcctcaccttctcttc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926272 19 - 16982598 ccttcctcaccttctcttc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728382 19 - 3785965 ccttcctcaccttcttttc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306341 19 - 90373283 ccttcctcaccttctcttc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121180 19 - 179258 ccttcctcaccttctcttc i manLeu1.NW_012101652v1 M 524 C 0 s colAng1.NW_012114444v1 5596586 19 - 5823884 ccttcctcaccttctcttc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78297 13 + 372756 ------tcttcctctcttc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313648 13 + 16356641 ------tctttctctcttc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182467 13 + 1231380 ------tcttcctttcttc i cebCap1.NW_016107870v1 C 0 C 0 s mm10.chr2 181820805 19 + 182113224 tctttcttcctttcctttc i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e aotNan1.NW_018500483v1 2714285 0 + 11732439 C e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M e otoGar3.GL873542 22878031 0 + 22939663 C a score=99283.000000 s hg38.chr20_KI270870v1_alt 142070 14 + 183433 -tttttcttcccctc s panPan2.chr20 62142987 14 + 62195757 -tttttcttcccctc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532552 14 - 578057 -tttttcttcccctc i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92788171 14 - 92844088 -tttttcttcacctc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454218 14 + 96509753 -tttttcttcacctc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926291 14 - 16982598 -tttttcttcacctc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728401 13 - 3785965 -tttttcttcacct- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306360 14 - 90373283 -tttttcttcacctc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121199 14 - 179258 -tttttcttcacctc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596605 14 - 5823884 -tttttcttcacctc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78310 14 + 372756 -tttttcttcccctc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313661 14 + 16356641 -tttttcttcccctc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182480 14 + 1231380 -tttttcttcccctc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714285 10 + 11732439 -----tctccccctc i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22878031 14 + 22939663 -TTTTCCCTCCCTGC i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181820824 14 + 182113224 ttctttcttctcac- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66467971 10010 + 66533130 I e nomLeu3.chr13 110054210 571 - 110113093 M a score=1485133.000000 s hg38.chr20_KI270870v1_alt 142084 242 + 183433 ccctcccttttcccttccttccTCC---ATCTACAAGATTAATTAactcactcattcaacaaaagcatttgca------cca---t--gtaccaagccttggagagagagcagagaaaaaa-aggacaactacccctt------------------------------atccttgtagagtgcattttgggcagagtaggtgg---g---acagc---ctgtaaacaaataaatacgtaaattacttagtatggtgaatggtggtgcgtgtgctgggcaaa-aaagaagcagggaag s panPan2.chr20 62143001 241 + 62195757 ccctcccttttcccttccttcctcC---ATCTACAAGATTCATTAactcactcattcaacaaaagcatttgca------cca---t--gtaccaagccttggagagagagcagagaaaaaa--ggacaactacccctt------------------------------atccttgtagagtgcattttgggcagagtaggtgg---g---acagc---ctgtaaacaaataaatacgtaaattacttagtatggtgaatggtggtgcgtgtgctgggcaaa-aaagaagcagggaag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532566 243 - 578057 ccctcccttttcctttccttcctcc---ATCTATAAGATTAATTAactcactcattcaacaaaagcatttgca------cca---t--gtaccaagccttggagagagagcagaggaaaaaaaggacaactacccctt------------------------------atccttgtagagtgcattttgggcagagtaggtgg---g---acagc---ctgtaaacaaataaatacgtaaattacttagtatggtgaatggtggtgcgtgtgctgggcaaa-acagaagcagggaag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110054781 242 - 110113093 CCCTCCCTTTTCCCTTCCTTCCTCC---ATCTACAAGATTAATTAactcactcattcaacaaaagcatttgca------cca---t--gttccaagccctggagagagagcagagaaaaaa-agggcaactacccctt------------------------------gtccttgtagagtgcattttgggcaaagtaggtgg---g---acagc---ctgtaaacaaataaatacgtaaattacttagtatggcgaatggtggtgcgtgtgccgggcaaa-acagaagcagggaag i nomLeu3.chr13 M 571 C 0 s rheMac8.chr10 92788185 194 - 92844088 ccctcccttttcccttccttcctcc----cctACAAGATTAATTAactcattcattcaacgaaagcatttgca------cca---t--gtacccagccctggagagagagcagagaagaaa-aggacaactaaccctt------------------------------atccttgtagagtgcatttggggcagagtaggtgg---g---acagc---ctataaacaaataaatacgtaaatgacaaag------------------------------------------------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454232 194 + 96509753 ccctcccttttcccttccttcctcc----cctACAAGATTAATTAactcattcattcaacgaaagcatttgca------cca---t--gtacccagccctggagagagagcagagaagaaa-aggacaactaaccctt------------------------------atccttgtagagtgcatttggggcagagtaggtgg---g---acagc---ctataaacaaataaatacgtaaaTGACAAAG------------------------------------------------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926305 194 - 16982598 ccctcccttttcccttccttcctcc----cctACAAGATTAATTAactcattcattcaacgaaagcatttgca------cca---t--gtacccagccctggagagagagcagagaagaaa-aggacaactaaccctt------------------------------atccttgtagagtgcatttggggcagagtaggtgg---g---acagc---ctataaacaaataaatacgtaaatgacaaag------------------------------------------------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728414 194 - 3785965 ccctcccttttcccttccttcctcc----cctATAAGATTAATTAactcattcattcaacgaaagcatttgca------cca---t--gtacccagccctggagagagagcagagaagaaa-aggacaactaaccctt------------------------------atccttgtagagtgcatttggggcagagtaggtgg---g---acagc---ctataaacaaataaatacgtaaatgacaaag------------------------------------------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306374 194 - 90373283 ctctcccttttcccttccttcctcc----cctACAAGATTAATTAactcattcattcaacaaaagcctttgca------cca---t--gtactcagccctggaaagagagcagagaagaaa-aggacaactaaccctt------------------------------ttccttgtagagtgcatttggggcagaataggtgg---g---acagc---ctataaacaaataagtacgtaaatgacaaag------------------------------------------------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121213 194 - 179258 ccctcccttttcccttccttcctcc----cctACAAGATTAATTAactcattcattcaacgaaagcctttgca------cca---t--gtacccagccctggagagagagcagagaagaaa-aggacaactaaccctt------------------------------atccttgtagagtgcatttggggcagagtaggtga---g---acagc---ctataaacaaataaatacgtaaatgacaaag------------------------------------------------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596619 194 - 5823884 ccctcccttttcccttccttcctcc----cctACAAGATTAATTAactcactcattcaacaaaagcatttgca------cca---t--gtacccagccctggagagagagcagagaagaaa-aggacaactaaccctt------------------------------atcgttgtagagtgcgtttggggcagagtaggtgg---g---acagc---ctgtaaacaaataaatacgtaaattacaaag------------------------------------------------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78324 274 + 372756 ccctcccttctccctTCCTTTCTCT---ACCTACAAGATTAATTAACTCATTCATTCAGCAAAAGCCTTTGCA------CCA---C--ATACCTAGCCTTGGAGAGAGAGCAGAGACAAAA-ATGACAACTAGCCCTTcagcaaacaaataataagtaaagtacttagtatggtgaatggtgGCTTTT-GACAGAGTAGGTgg---g---gggacagcctgtaaacaaataaataagcaaaatacttagtatggtgaatggtggtgtctgctctgggcaaa-actgaagcagggaag i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313675 201 + 16356641 ccctcccttctctcttcctttctct---ACCTACAAGATTAAATAACTCATTCATTCAGCAAAAGCGTTTATA------CCA---C--ATACCTAGCCCTGGAGAGAGAGCAGAGACAAAA-AGGACAACTAGCCCTT--------------------------------------------------------------------------------CTCCaaacaaataaataagtaaaatacttagtgtggtgaatggtggtgccttctctgggcaaa-actggagcaggcaag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182494 201 + 1231380 ccctcccttctcccttccTTTCTCT---ACCTACAAGATTAATTAACTCATTCATTCAGCAAAAGCATTTACA------CCA---C--ATACCTAGCCCTGGAGAGAGAGCAGAGACAAAA-AGGACAACTAGCCCTT--------------------------------------------------------------------------------CTCCaaacaaataaataagcaaaatacttagtatggtgaatggtggtgcctgctctgggcaaa-actgaagcagggaag i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714295 201 + 11732439 ccctcccgtctcccttccTTTCTCT---GCCTACAAGATTAAATAACTCATTCATTCAGCAAAAGCCTTTACA------CCA---C--ATACCTAGCCCTGGAGAGAGAGCAGAGACAGAA-AGGGCAACTAGCCCTT--------------------------------------------------------------------------------CTCCaaacaaataaataagtaaaatacttggtatggcgaatggtggtgcctgccgtgggcaga-gctgaagcagggaag i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22878047 248 + 22939663 CCCTCCCTTTCCTCTACCCTAACCTTAACCCTCCAAGATTAATTAactcattcagttaac-aaagtatttaca------ccactgt--gtaccaagccctggaaagagagcagagaacaga-aggacacccatccctg------------------------------gtccatgtggtgtgtaattttggcagggtaggtggggag---acagc---ctgtaagcaggtaaatagataaaatgcctggtatggtgagtggtggagagtgctctgggtaag-a-ggcagtggggag- i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181820838 230 + 182113224 -----cctt----ctttcttCTTCC---ACCTACAA----AGTTAATGCATCCATTCAACAAAAATATTTACAGAGAGTCCA---CTAGCATCCAGGAGTAGAGACAGAGCAGAGAACAAA-AGAACAACCTGCCATT------------------------------GCCATTTT-GAGTGTGTGTTGAGCAGGGTGGGTAG---GAACATATA---GTTTAAATAAGTTAA-----GAATTACTGAATCTGGTGAATAGTGATCAGGGATTGGGGAAAACAACAGAGCTG----- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66467971 10010 + 66533130 I a score=502449.000000 s hg38.chr20_KI270870v1_alt 142326 48 + 183433 aggacaaggaagtCCTCTTTGAGAAGGAAGTAG--CAGCTTGGCCTGAGG s panTro5.chr20 66477981 49 + 66533130 AGGACAGTGAAGTCCTCTTTGAGAAG-AAGTAAGCCAGCTTGGCCTGAGC i panTro5.chr20 I 10010 C 0 s panPan2.chr20 62143242 48 + 62195757 aggaccaggaagtcctctttgagaaggaagtag--cagcttggcctgagg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532809 48 - 578057 aggacaaggaagtCCTCTTTGAGAAGGAAGTAG--CAGCTTGGCCTGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055023 48 - 110113093 aggacaaggaagtcctctttgagaaggaggtag--cagcttggcctgagg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788379 48 - 92844088 aggacaaggaagtcctctttgagaaggaggtag--cagcttggcctgagg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454426 48 + 96509753 AGGACAAGGAAGTCCTCTTTGAGAAGGAGGTAG--CAGCTTGGCCTGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926499 48 - 16982598 aggacaaggaagtcctctttgagaaggaggtag--cagcttggcccgagg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728608 48 - 3785965 aggacaaggaagtcctctttgagaaggaggtag--cagcttggcctgagg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306568 48 - 90373283 aggacaaggaagtcctctttgagaaggaggtag--cagcttggcctgagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121407 48 - 179258 aggacaaggaagtcctctttgagaaggaggtag--cagcttggcctgagg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596813 48 - 5823884 AGGACAAGAAAGTCCTCTTTGAGAAGGAGGTAG--CAGCTTGGTCTGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78598 48 + 372756 aggacaaggaagtCCTCTTTGAGAAGGAGGTAG--CAGCTTGGCCTGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313876 29 + 16356641 aggac-------------------aggaggtag--cagctgggcctgagg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182695 48 + 1231380 aggacagggaAGTCCTCTTTGAGAAGGAGGTAG--CAGCTTGGCCTGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714496 48 + 11732439 aggacaaggaagtCCTCTTTGAGAAGGAGGCAG--CAGCTTGGCCTGAGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22878295 46 + 22939663 ggggtaaggagG-CCTCTCTGAGGAGGAGGCAG--GAACTTGA-CTGAGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821068 46 + 182113224 TGGGCAA-AATGTACT-TTGGAGAAAAAGCCAG--AAGCTTGCTCAGAGA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889466 273 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I a score=15561.000000 s hg38.chr20_KI270870v1_alt 142374 1 + 183433 T s panTro5.chr20 66478030 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62143290 1 + 62195757 t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532857 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055071 1 - 110113093 t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788427 1 - 92844088 t i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454474 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926547 1 - 16982598 t i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728656 1 - 3785965 t i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306616 1 - 90373283 t i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121455 1 - 179258 t i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596861 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78646 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313905 1 + 16356641 t i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182743 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714544 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1889739 1 - 2029793 T i proCoq1.NW_012150197v1 I 273 C 0 s otoGar3.GL873542 22878341 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821114 1 + 182113224 T i mm10.chr2 C 0 C 0 e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56894056 949 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I a score=797990.000000 s hg38.chr20_KI270870v1_alt 142375 71 + 183433 GTCTGGGGCACAAGCCCTCAGCGAAGTGGCTGGAGCTGGGAACAGCCTGG----CCCGCTGGAC--------------AAGGTTGGAGG s panTro5.chr20 66478031 64 + 66533130 GTCTGGGGCACAAGCCCTCAACGAAAT-GCT-GAGCTGGGAACAG-CTG------CCG-TGGAC--------------AAGGTT-GAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62143291 71 + 62195757 gtctggggcacaagccctcagcgaagtggctggagctgggaacagcctgg----cccgctggac--------------aaggttggagg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532858 71 - 578057 GTCTGGGGCACAAGCCCTCAGCGAAGTGGCTGGAGCTGGGAACAGCCTGG----CCCACTGGAC--------------AAGGTTGGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055072 71 - 110113093 gtctggggcacaagccctcagtgaagtggctggagctgggaacagcctgg----cccgctggac--------------aaggttggagg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788428 71 - 92844088 gtctggggcacaaggcctcagtgaggtggctggagctgggaACACCCTGG----TCCGCTGGAC--------------GAGGTTGGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454475 71 + 96509753 GTCTGGGGCACAAGGCCTCAGTGAGGTGGCTGGAGCTGGGAACACCCTGG----TCCGCTGGAC--------------GAGGTTGGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926548 71 - 16982598 gtctggggcacaaggcctcagtgaggtggctggagctgggaACACCCTGG----TCCGCTGGAC--------------AAGGTTGGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728657 71 - 3785965 gtctggggcacaaggcctcagtgaggtggctggagctgggaACAGCCTGG----TCCGCTGGAC--------------gaggttggagg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306617 71 - 90373283 gtctggggcacaaggcctcagtgaggtggctggagctgggaACAGCCTGG----TCCGCTGGAC--------------GAGGTTGGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121456 71 - 179258 gtctggggcacaaggcctcagtgaggtggctggagctgggaACAGCCTGG----TCCGCTGGAC--------------GAGGTTGGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596862 85 - 5823884 GTTTGGGGCACAAGGCCTCAGTGAAGTGGCTGGAGCTGGGAACAGCCTGG----CCCACTGGACCTGGCCCACTGGATgaggttggagg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78647 71 + 372756 GTCTGGGACACAAGCCCTCAGTCAAGTGGCTGGAGCTGGGAACAGTCTGG----CCCCCTTGAC--------------AAGGTTGGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313906 71 + 16356641 gtCTGGGGCACAAGCCCTCAGTCAGGTGGCTGGAGCTGGGAACAGTCTGG----CCCCCGTGAC--------------AAGGCTGGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182744 61 + 1231380 GTCTGGGGCACAAGCCCTCCGTCACGTGGCTGGAGCTGGGAACAGTCCGG----CCCCCATGAT--------------A---------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714545 71 + 11732439 GTGTGGGGCACAAGCCCTCAGTCCAGTGGCTGGAGCTGGGAACAGCGTGG----CCCCCTTGAC--------------AAGGTTGTAGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56895005 71 + 57149010 GTCTGGGGGACAAGCCTTCCGTGGACTGGCTGGAGCCGGGAATGGCCTGG----CCTGCTGGAC--------------AGGTTTGGAGG i micMur3.chr18 I 949 I 232 s proCoq1.NW_012150197v1 1889740 71 - 2029793 GTCTGGGGGACAAGCCCTCGGTGGAGTGGCTGGAGCCAGGAATGGCCTGG----CCTGCTGGGC--------------AAGTTTGGAGG i proCoq1.NW_012150197v1 C 0 I 6 s otoGar3.GL873542 22878342 61 + 22939663 ATCT-GGGGACAAACCCTCAGAGGAGTGGCTGGACCTGGGAAGG-------------GCTGGAC--------------AAATTTGGAGG i otoGar3.GL873542 C 0 I 9 s mm10.chr2 181821115 65 + 182113224 GTATGGAGGACAAGTTCTCAT----ATAGCTGGAGCTGGGGAGGGCTTGGCATACCTACTAAAT--------------GGGGT------ i mm10.chr2 C 0 C 0 e canFam3.chr24 47633901 512 + 47698779 I e dasNov3.JH569290 272069 437 - 397369 I a score=477102.000000 s hg38.chr20_KI270870v1_alt 142446 46 + 183433 TGCTGAGGG---------CCTGga-gcca-gggagagggagcaaaa-gagatgaggta s panTro5.chr20 66478095 47 + 66533130 TGCTGA-GG---------CCTGGATGCCA-GGGAGAGGGAGCAAAAGGAGATGAGGTA i panTro5.chr20 C 0 I 814 s panPan2.chr20 62143362 47 + 62195757 tgctgaggg---------cctgga-gcca-gggagagggagcaaaaggagatgaggta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532929 47 - 578057 TGCTGAGGG---------GCTGga-gcca-gggagagggagcaaaaggagatgaggta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055143 47 - 110113093 tgctgaggg---------gctgga-gcca-gggagcaggagcaaaaggagatgaggta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788499 47 - 92844088 TGCTGGGGG---------GCTGGA-GCCA-GGGAGAGGCAGCGAAAGGAAATGAGGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454546 47 + 96509753 TGCTGGGGG---------GCTGGA-GCCA-GGGAGAGGCAGCGAAAGGAAATGAGGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926619 47 - 16982598 TGCTGGGGG---------GCTGGA-GCCA-GGGAGAGGCAGCGAAAGGAAATGAGGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728728 47 - 3785965 tgctggggg---------gctgga-gcca-gggagaggcagtgaaaggaaatgaggta i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306688 47 - 90373283 TGCTGGGGG---------GCTGGA-GCCA-GGGAGAGGCAGCGAAAGGAAATGAGGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121527 47 - 179258 TGCTGGGGG---------GCTGGA-GCCA-GGGAGAGGCAGCGAAAGGAAATGAGGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596947 47 - 5823884 tgctggggg---------gctgga-gcca-gggagaggcagcgaaaggaaatgaggta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78718 47 + 372756 AGCTCGGGA---------GCTGGA-GCCA-GGGAGAGGGAGCAAAAGGAGGTGAGGTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16313977 47 + 16356641 AGCTGGGGG---------GCTGCA-GCCA-GGGAGAGGGGGCAAAAGGAGATGAGGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182805 47 + 1231380 AGCTGGGGG---------GCTGCA-GCCA-GGGAGAGGGGGCAAAAGGAGATGAGGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714616 47 + 11732439 AGCTGGGGG---------CCTGga-gcca-gggagacggagcaaaaggagatgaggtg i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1889817 49 - 2029793 -GCTGGGGTGT-------GCTGGA-GCCAGGGAAGAGGGGGCAAAAGGAGATGAGGCG i proCoq1.NW_012150197v1 I 6 C 0 s otoGar3.GL873542 22878412 56 + 22939663 TGCAGAGGTGGAGACCCAGGAGGA-GCCA-GGAGGAGAGGGCAAAAGGAGATGAAGCA i otoGar3.GL873542 I 9 C 0 s mm10.chr2 181821180 18 + 182113224 -----------------------A-ACAA-AGGAAAGGAGACA--------------- i mm10.chr2 C 0 C 0 e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56895076 232 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I a score=677809.000000 s hg38.chr20_KI270870v1_alt 142492 71 + 183433 gaaagttctaagccaggg-cttatctggctgccc----gctggcaaggactcagctttcactgtgagtgaggg-ccc s panPan2.chr20 62143409 72 + 62195757 gaaagttctaagccaggg-cttatctggctgcca----gctggcaaggactcagctttcactgtgagtgaggggccc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 532976 72 - 578057 gaaagttctaagccaggg-cttatctggctgcca----gctggcaaggactcagctttcactgtgagtgaggggccc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055190 72 - 110113093 gaaagttctgagccaggg-cttatctggctgcca----gctggcaaggactcagctttcactgtgagtgagggtccc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788546 71 - 92844088 GAAAGTTCTGGGCCAGGG-CTTATCCGGCTGCCA----GCTGGCAAGGACTCAGCGTTCACTGTGAGTGAGGGG-CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454593 71 + 96509753 GAAAGTTCTGGGCCAGGG-CTTATCCGGCTGCCA----GCTGGCAAGGACTCAGCGTTCACTGTGAGTGAGGGG-CC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926666 71 - 16982598 GAAAGTTCTGGGCCAGGG-CTTATCCGGCTGCCA----GCTGGCAAGGACTCAGCGTTCACTGCGAGTGAGGGG-CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728775 71 - 3785965 gaaagttctgggccaggg-cttatccggctgcca----gctggcaaggactcagcgttcactgtgagtgagggg-cc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306735 71 - 90373283 GAAAGTTCTGGGCCAGGG-CTTATCCGGCTGCCA----GCTGGCAAGGACTCAGTGTTCACTGTGAGTGAGGGG-CC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121574 71 - 179258 GAAAGTTCTGGGCCAGGG-CTTATCCGGCTGCCA----GCTGGCAAGGACTCAGCGTTCACTGTGAGTGAGGGG-CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5596994 72 - 5823884 gaaagttctgggccaggg-cttatctggctgcca----gctggcaaggactcagcgttcactgtgagtgaggggccc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78765 72 + 372756 GGAAGTTCTGAGCCGGGG-CTTATCTGGCTGCCA----GCTGGCAAGGATTCAGCTTTCACTGTGAGTGAGGGGCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314024 71 + 16356641 GGGAGCTCTGAGCC-GGG-CTTATCGGGCTGCCA----GCTGGCAAGGACTCAGCTTTCACTGTGAGTGATGGGCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182852 75 + 1231380 GGAAGCTCTGAACC-CGG-CTTATCTGGCTGCCAGCTGGCTGGCAAGGACTCAGCTTTCATGGTGAGTGAGGGGCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714663 72 + 11732439 agaagttctgagctgggg-cttatctggccgcca----gctggcaaggactcagctttcactgtgagtgaggggccc i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1889866 72 - 2029793 GAAATTTCTGAGCCAGGATCTTTCCAGGCTGCCA----GCTGGTAAGGTCTCAGCTTGCACCGTGAGTGAGGGCCC- i proCoq1.NW_012150197v1 C 0 I 310 s otoGar3.GL873542 22878468 72 + 22939663 GAAAGTTTGGAGCCTGGATCCTACCAGAATGCCA----GTGGGCAAGGACTTGGCTTGCCCTGTGAGTAAAGGGCC- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181821198 41 + 182113224 -GAACTT------------TGTATCTA---GCCA----GTTG---------------CCTCAGAGAGTGAGGGGCC- i mm10.chr2 C 0 C 0 e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56895076 232 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66478142 814 + 66533130 I a score=878280.000000 s hg38.chr20_KI270870v1_alt 142563 122 + 183433 tggcagaaggcagaggagagact-agatctggcATGGGCAGCTGGCATGGACACA-GCTGCAGAA------------GCCGGGAAGGCCACTAAAGGAGACTACTGCAGCCGGGGTCAGTTGGGCA---GAG-ACTTATG-- s panPan2.chr20 62143481 122 + 62195757 tggcagaaggcagaggagagact-agatctggcATGGGCAGCTGGCATGGACACA-GCTGCAGAA------------GCCAGGAAGGCCACTAAAGGAGACTACTGCAGCCGGGGTCAGTTGGGCA---GAG-ACTTATG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533048 122 - 578057 tggcagaaggcagaggagagact-agatctgatatgGGCAGCTGGTATGGACACA-GCTGCAGAA------------GCCAGGAAGGCCACTAAAGGAGGCTACTGCAGCCGGGGTCAGTTGGGCA---GAG-ACTTATG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055262 122 - 110113093 tggcagaaggcagaggaaagact-agatctggcATGGGCAGCTGGCATGGACACA-GCTGCGGAA------------GCCAGGAAGGCCACTAAAGGAGGCTCCTGCAGCCGGGGTCAGTTGGGCA---GAG-ACTCACG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788617 122 - 92844088 TGGCAGAAGGCAGAGGAGAGACT-AGATCTGGCACGGGCAGCTGGCACGGTCACA-GTCGCAGAG------------GCCGAGAGGGCCACTAAAGGAGGCCGCTGCAGCCAGGGTCAGGTGGGCA---GAG-ACTCAGG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454664 122 + 96509753 TGGCAGAAGGCAGAGGAGAGACT-AGATCTGGCACGGGCAGCTGGCACGGTCACA-GTCGCAGAG------------GCCGAGAAGGCCACTAAAGGAGGCCGCTGCAGCCAGGGTCAGGTGGGCA---GAG-ACTCAGG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926737 122 - 16982598 TGGCAGAAGGCAGAGGAGAGACT-AGATCTGGCGCGGGCAGCTGGCACGGTCACA-GTCGCAGAG------------GCCGAGAAGGCCACTAAAGGAGGCCGCTGCAGCCAGGGTCAGGTGGGCA---GAG-ACTCAGG-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728846 122 - 3785965 tggcagaaggcagaggagagact-agatctggcACGGGCAGCTGGCACGGTCACA-GTCGCAGAG------------GCCAAGAAGGCCACTAAAGGAGGCCGCTGCAGCCAGGGTCAGGTGGGCA---GAG-ACTCAGG-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306806 122 - 90373283 TGGCAGAAGGCAGAGGAGAGACT-AGATCTGGCACTGGCAGCTGGCACGGTCACA-GTCGCAGAG------------GCCGGGAAGGCCACTAAAGGAGGCCACTGCAGCCAGGGTCAGGTGGGCA---GAG-ACTCAGG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121645 122 - 179258 TGGCAGAAGGCAGAGGAGAGACT-AGACCTGGCACGGGCAGCTGGCACGGTCACA-GTCGCAGAG------------GCCAAGAAGGCCACTAAAGGAGGCCGCTGCTGCCAGGGTCAGGTGGGCA---GAG-ACTCGGG-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597066 122 - 5823884 tggcagaaggcagaggagagact-agatctggcACGAGCAGCTGGCATGGTCACA-GTCGCAGAG------------GCCAGGAAGGCCACTAAAGGAGGCTACTGCAGCCAGGGTCAGGTGGGCA---GAG-ACTCACG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78837 104 + 372756 TGGCAGGAGGCAGAGGAGAGACT-AAATCTGTTGTGGGCAACTGGCA----------------------------------GGAAGGCCACTAAAGGAAGCTACCGCAGCTGGTCTCAGGTGGGCAGAGGAG-ACTCACT-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314095 103 + 16356641 TGGCAGGAGGCAGAGGAGAGACT-AGGTCTGTTGTGGGCAGCTGGCA----------------------------------GGAAGGCCACTGAAGGAAGCTGCTGCAGCCGGGGT-GGGCGGGCAGAGGAG-ACTCACT-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1182927 104 + 1231380 TGGCAGGAGGCAGAGGAGAGACG-AGGTCTGTCGTGGGCAGCTGGCA----------------------------------GGAAGGCCACTGAAGGAAGCTGCTGCAGCCGGGGTCAGGAGGGCAGAGGAG-ACTCACT-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714735 104 + 11732439 tggcaggaggcagaggagagact-agatctgTCATGGGCAGCTGGCA----------------------------------GGAAGGCCGCTAAAGGAAGTGACCGCAGCCGGGGCCGGGTGGGCAGAGGAG-ACTTACT-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22878541 112 + 22939663 TGGGATGGTGCAGGAGAGAGGCCAAGGTCTGCCCTGGGTGGCTGGCACAGCTCTAGGCTGCTGAG----------------GAGAGGCCAGTG-AGGAGGCTGCTG-GGCCTGGGCCAGGTGGGCA---CAT-C-------- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181821239 137 + 182113224 TAGTTAGGAGCACAGAAAAAATG-GGGTCTCATTTGGGCAGCTGGGATCACCGCAGGATACAGACCATAAAGGAAATGCCAAGAAGACCAC-AGAAGAGACCGCCAGAGCTTGGACCAAGTGGGTG---GGGCAGTTGAACA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889938 310 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56895076 232 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66478142 814 + 66533130 I a score=635078.000000 s hg38.chr20_KI270870v1_alt 142685 67 + 183433 CTGGGCTTCCTAAGGACATCTTA-CCTTGCCTCAATCAACCTTTACTTATGGTGTGGATACAATCACT s panPan2.chr20 62143603 67 + 62195757 CTGGGCTTCCTAAGGACATCTTA-CCTTGCCTCAATCAACCTTTACTTATGGTGTGGATACAATCACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533170 67 - 578057 CTGGGCTTCCTAAGGACATCTTA-CCTTGCCTCAATCAACCTTTACTTATGGTGTGGATATAATCACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055384 67 - 110113093 CTGGGCTTCCTAAGGGCATCTCA-CCTTGCCTCAATCAACCTTTACTTATGGTGTGGACACAGTCACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788739 66 - 92844088 CTGGGCTTCCTAAGGACGTCTCA--CTTGCCTCAATCAACCTTTACTTATGGTGTGGATACAATCACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454786 66 + 96509753 CTGGGCTTCCTAAGGACGTCTCA--CTTGCCTCAATCAACCTTTACTTATGGTGTGGATACAATCACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926859 66 - 16982598 CTGGGCTTCCTAAGGACGTCTCA--CTTGCCTCAATCAACCTTTACTTATGGTGTGGATACAATCACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3728968 66 - 3785965 CTGGGCTTCCTAAGGACGTCTCA--CTTGCCTCAATCAACCTTTACTTATGGTGTGGATACAATCACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306928 66 - 90373283 CTGGGCTTCCTAAGGACGTCTCA--CTTGCCTCAATCAACCTTTACTTATGGTATGGATACAATCACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121767 66 - 179258 CTGGGCTTCCTAAGGACGTCTCA--CTTGCCTCAATCAACCTTTACTTATGGTGTGGATACAATCACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597188 68 - 5823884 CTGGGCTTCCTAAAGACGTCTCAGCTTTGCCTCAATCAACCTTTACTTATGGTGTGGATACAATCACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 78941 63 + 372756 CTGGGCTTCCTAAGGACAGTCCA-CCTTGCC----TCAACCTTTACTTATAGTGGGGATACAATCACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314198 63 + 16356641 CCGGGCTTCCTAAGGACCTTCCA-CCTCGCC----CCAACCTTTACTCACAGTGGGGTTACAATCACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183031 63 + 1231380 CCAGGCTTCCTGAGGACATTCCG-CCTTGCC----TCAACCTTTACTTACAGCGGGGTTGCAATCACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714839 63 + 11732439 CCGGGCTTCCTAAGGACGTTCCA-CCTCGCC----TCAACCTTCACTCACAGCGGGGATGCAGTCACT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56895308 67 + 57149010 CTGGGCTTCCTATGGACATTGCA-ACTTGCCTCAATCTACCTTTACTTATGATGTGGATAAAATCACT i micMur3.chr18 I 232 I 166 s otoGar3.GL873542 22878653 59 + 22939663 CCAGGCTTCCTATGGACATTGCG-CCTGGCCTCAGTCTACCTTTATTTATAATATGGATA-------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821376 59 + 182113224 CTGTGCTTCTGCAGTACATTTCA--CTCACC-------ACCTTGAGTTATGATGTGGATGAAATCACA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889938 310 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66478142 814 + 66533130 I a score=1262548.000000 s hg38.chr20_KI270870v1_alt 142752 152 + 183433 TCATAAATGAAATCATGCTTGAGAATGCACA-ATTGTAATG-----CATTTTTCTGCTTGAGTGTCTATATCCGAGGAGTGATCTGTGACTGTCATTATCACCACAGCCTAGAGGGTATCTCAGAGGCAGACGCAGCTAGGATGGGCTCCT--CTGGGAG s panPan2.chr20 62143670 152 + 62195757 TCATAAATGAAATCATGCTTGAGAACGCACA-ATTTTAATG-----CATTTTTCTGCTTGAGTGTCTATATCCGAGGAGTGATCTGTGACTGTCATTATCACCACACCCTAGAGGGTATCTCAGAGGCAGACGCAGCTAGGATGGGCTCCT--CTGGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533237 152 - 578057 TCATAAATGAAATCATGCTTGAGAATGCACA-ATTTTAATG-----CATTTTTCTGCTTGAGTGTCTATATCCGAGGAGTGATCTGTGACTGTCATTAGCACCACACCCTAGAGGGTGTCTCAGAGGCAGACGCAGCTAGGATGGGCTCCT--CTGGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055451 152 - 110113093 TCATAAATGAAATCATGCCTGAGAATGCACA-ATTTTAATG-----CATTTTTCTGCTCGAGTGTCTATATCCGAGGAGTGATCTGTGACTGTCATTACCACCACATCCTAGAGGGTGTCTCAGAGGCAGAGGCAGCTAGGATGGGCTCCT--CTGGGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788805 152 - 92844088 TCATAAAGGAAATCATGCCTGAGAATGTACA-ATTTTAATG-----CCTTTTTCTGCTCGAGTGTCTGTATCCGAGGAGTGATCTGTGATTGTCGTTACCACCACATCCTAGAGGGTGTCTCAGAGGCAGAGTCAGCCAGGACCGGCTCCT--CTGGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96454852 152 + 96509753 TCATAAAGGAAATCATGCCTGAGAATGTACA-ATTTTAATG-----CCTTTTTCTGCTCGAGTGTCTGTATCCGAGGAGTGATCTGTGATTGTCGTTACCACCACATCCTAGAGGGTGTCTCAGAGGCAGAGTCAGCCAGGACCGGCTCCT--CTGGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16926925 152 - 16982598 TCATAAAGGAAATCATGCCTGAGAATGTACA-ATTTTAATG-----CCTTTTTCTGCTCGAGTGTCTGTATCCGAGGAGTGATCTGTGATTGTCGTTACCACCACATCCTAGAGGGTGTCTCAGAGGCAGAGTCAGCCAGGACCGGCTCCT--CTGGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729034 152 - 3785965 TCATAAAGGAAATCATGCCTGAGAATGTACA-ATTTTAATG-----CCTTTTTCTGCTCGAGTGTCTGTATCCGAGGAGTGATCTGTGATTGTCGTTACCACCACATCCTAGAGGGTGTCTCAGAGGCAGAGTCAGCCAGGACCGGCTCCT--CTGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90306994 152 - 90373283 TCATAAAGGAAATCGTGCCTGAGAATGTACA-ATTTTAATG-----CCTTTTTCTGCTCGAGTGTCTGTATCTGAGGAGTGATCTGTGATTGTCGTTACCACCACATCCTAGAGGGTGTCTCAGAGGCAGAGTCAGCCAGGACCGGCTCCT--CTGGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121833 152 - 179258 TCATAAAGGAAATCATGCCTGAGAATGTACA-ATTTTAATG-----CCTTTTTCTGCTCGAGTGTCTGTATCCGAGGAGTGATCTGTGATTGTCGTTACCACCACATCCTAGAGGGTGTCTCAGAGGCAGAGTCAGCCAGGACCGGCTCCT--CTGGGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597256 152 - 5823884 TCATAAAGGAAAGCATGCCTGAGAATGTACA-ATTTTAATG-----CCTTTTTCTGCTCGAGCGTCTGTATCCGAGAAGTGATCTGTGATTGTCGTTACCACCACATCCTAGAGGGTATCTCAGAGGCAGAGTCAGCTAGGACCGGCTCCT--CTGGGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79004 151 + 372756 TCTTAAATGAAATCATGCCTGAGAATTGACACATTTTGACG-----CATTTTACTGCTTGAGTATCTACATT-AAGGAGTGATCGGTGACTGTCATTACCACCACATCCT-GTGGGTAGCTCAGGGGCAAAGTCAGCTGGGACAGGCTCCT--CTGGGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314261 150 + 16356641 TCATAAATGAAATCACGCCTGAGAACCGACACA-TTTGACA-----CACTTTTCTGCTTGAGCATCTGTATC-AAGGAGTGATCGGTGAATGTCGTTACCACCACATCCT-GAGGGTAGCTCAGGGGCAGAGCCAGCTGGGACAGGCTCCC--CTGGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183094 150 + 1231380 TCATAAATGAAATCACGCCTGAGAATCGACACATTTTGACG-----CACTCTTCTGCTTGAGTATCTATATG-AAGGAGCGACCGGTGACTGTCGTTACCACCACATCCT-G-GGGTAGCCCAGGGGCAGAGTCAGTGGGGACAGGCTCCT--CTGGGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2714902 125 + 11732439 TCATACATGAAATCGTG-----------------------------CACTTTTCTGCTTGAGTATCTCTATC-GAGGAGTGACGGGTGACTGTCATTACCACCAC-TCCT-GAGGGTAGCTC-GGGGCAGAGTCAGCTGGGACAGGCTCCT--CTGGGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22878712 146 + 22939663 ---------AGATTGTGCCTGAGAATCCACATATTATTATG-----CATATTTCTGTTTTAATGTCTATATCCAAGGAGCCATCTGTGAATATCATTATAACCACACCCTGAAAGGTCTCTCAGGGACAGGGTCCACTATGAGGGCCTCCTAGTTGAAGG i otoGar3.GL873542 C 0 I 4 s mm10.chr2 181821435 155 + 182113224 -CAATCATGAAGTAGTGTGTGATAATCCACATGTTTTTATATGTTTTCTTTTTCTGCTTGAATAGCTATATTAAAGGAATCACCTGTGAATGCTGGTACATCCATATCCTGAAGGATCTCTCA--GGTGGGGTTAGCTCTGAGGACCCCCT--CGCAGAG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1889938 310 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56895375 166 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66478142 814 + 66533130 I a score=359843.000000 s hg38.chr20_KI270870v1_alt 142904 32 + 183433 GTCAGGGCTGCAAAGTACCGGCAAGTGGGTCA s panPan2.chr20 62143822 32 + 62195757 GTCAGGGCTGCAAAGTACCGGCAAGTGGGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533389 32 - 578057 GTCAGGGCTGCAAAGTACCGGCAAGTGGGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055603 32 - 110113093 GTCAGGGCTGCAAAGTACCGGCAAGCGGGTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788957 32 - 92844088 GTCCGGGCTGCAAAGCACGGGCAAGCGGGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455004 32 + 96509753 GTCCGGGCTGCAAAGCACGGGCAAGCGGGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927077 32 - 16982598 GTCCGGGCTGCAAAGCACGGGCAAGCGGGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729186 32 - 3785965 GTCCGGGCTGCAAAGCACGGGCAAGCGGGTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307146 32 - 90373283 GTCTGGGCTGCAAAGCACAGGGAAGCGGGTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 121985 32 - 179258 GTCCGGGCTGCAAAGCACGGGCAAGCGGGTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597408 32 - 5823884 GTCCAGGCTGCAAAGTACGGGCAAGCGGGTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79155 32 + 372756 GTCAGGGCTGCAAAGTGCTGGCAAGAGGGTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314411 32 + 16356641 GTCAGGGCTGCAAAGTGCTGGCAAGAGGGTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183244 32 + 1231380 GTCAGGGCTGCAAAGTGCTGGCAAGAGTGTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715027 32 + 11732439 GCCAGGGCTGCAAAGTGCTGGCAAGAGGGCCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56895541 32 + 57149010 GTCAGGGCTGCAAAGTGCCAGCAAGTGAGTCA i micMur3.chr18 I 166 I 255 s proCoq1.NW_012150197v1 1890248 32 - 2029793 GTCAGGGCTGCAAAGTACCAGCAACTGGGTCA i proCoq1.NW_012150197v1 I 310 C 0 s otoGar3.GL873542 22878862 31 + 22939663 GTTAGGGCTGCAAAGTGCTA-CAAATGAGCCA i otoGar3.GL873542 I 4 C 0 s mm10.chr2 181821590 32 + 182113224 TTCAGTGCTCCAGAATGCCAGCAGGTGGGGCA i mm10.chr2 C 0 C 0 e canFam3.chr24 47633901 512 + 47698779 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66478142 814 + 66533130 I a score=147848.000000 s hg38.chr20_KI270870v1_alt 142936 14 + 183433 TGTG-------GACCTCAGAC s panPan2.chr20 62143854 14 + 62195757 TGTG-------GACCTCAGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533421 14 - 578057 TGTG-------GACCTCAGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055635 21 - 110113093 TGTGGACCTCAGACCTCAGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92788989 14 - 92844088 TGTG-------GACCTCAGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455036 14 + 96509753 TGTG-------GACCTCAGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927109 14 - 16982598 TGTG-------GACCTCAGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729218 14 - 3785965 TGTG-------GACCTCAGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307178 14 - 90373283 TGTG-------GACCTCAGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122017 14 - 179258 TGTG-------GACCTCAGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597440 14 - 5823884 TGTG-------GACCTCAGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79187 14 + 372756 TGTG-------GACCTTAGAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314443 14 + 16356641 TGTG-------GACCTCAGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183276 14 + 1231380 TGTG-------GACCTTAGAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715059 14 + 11732439 TGTG-------AACCTTAGAC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1890280 14 - 2029793 GGTG-------GACCTTAGAC i proCoq1.NW_012150197v1 C 0 I 173 s otoGar3.GL873542 22878893 10 + 22939663 GGGG-------GACCTT---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821622 14 + 182113224 TGCA-------AGCCTCAGCC i mm10.chr2 C 0 I 4 e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56895573 255 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66478142 814 + 66533130 I a score=1029154.000000 s hg38.chr20_KI270870v1_alt 142950 132 + 183433 CCCAGAGGGAGCCCTGCTGAGAGCAACGGTGCCCTGGCCCCCCGAGTATCAGGCAGGGTCAGCTATGGCTGTGCCAGATGAGGTGAGCTCTGGAGTGTCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC s panPan2.chr20 62143868 132 + 62195757 CCCAGAGGGAGCCCTGCCGAGAGCAACAGTGCCCTGGCCCCCCGAGTATCAGGCAGGGTCAGCTATGGCTGTGCCAGATGAGGTGAGCTCTGGAGTGTCCCCTTCCCAACCTCTGCCCTGCCTAGATGTAGC i panPan2.chr20 C 0 M 3948 s gorGor5.CYUI01015848v1 533435 123 - 578057 CCCAGAGGGAGCCCTGCCGAGAGCAATGGTG---------CCCGAGTATCAGACAGGGTCAGCTATGGCTGTGCCAGATGAGGTGAGCTCTGGAGTGTCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055656 131 - 110113093 CCCAGAGGGAGCCCTGCAGAGAGCAACAGTGCCCTGGCC-CCCGAGTATCAGACAGGGTCAGCTATGGCTGTGCCAGACGAGGTGAGCTCTGGAGTGTCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789003 132 - 92844088 CCCAGAGGGAGCCTTACCCAGAGCACCACTGCCCCGGCCCCTCGAGTATCAGGTAGGGCCAGCTATGGCTGTGCCAGGTGAGGTGAGCTCTGGAGTGTCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455050 132 + 96509753 CCCAGAGGGAGCCTTACCCAGAGCACCACTGCCCCGACCCCTCGAGTATCAGGTAGGGCCAGCTATGGCTGTGCCAGGTGAGGTGAGCTCTGGAGTGTCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927123 132 - 16982598 CCCAGAGGGAGCCTTACCCAGAGCACCACTGCCCCGGCCCCTCGAGTATCAGGTAGGGCCAGCTATGGCTGTGCCAGGTGAGGTGAGCTCTGGAGTGTCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729232 132 - 3785965 CCCAGAGGGAGCCTTACTCAGAGCACCACTGCCCCGGCCCCTCGAGTATCAGGTAGGGCCAGCTATGGCTGTGCCAGGTGAGGTGAGCTCTGGAGTGTCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307192 132 - 90373283 CCCAAAGGGAGCCTTACCCAGAGCACCACTGCCCCGGCCCCTCGAGTATCAGGTAGGGCCAGCTATGGCTGTGCCAGGTGAGGTGAGCTCTGGAGTGTCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122031 132 - 179258 CCCAGAGGGAGCCTTACTCAGAGCACCACTGCCCCGGCCCCTCGAGTATCAGGTAGGGCCAGCTATGGCTGTGCCAGGTGAGGTGAGCTCTGGAGTGTCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597454 132 - 5823884 CCCAGAGGGAGCCTTACCCAGAGCAACACTGCCCCGGCCCCTCGAGTATCAGGTAGGGCCAGCTATGGCTGTGCCAGGTGAGGTGAGCTCTGGAGTGCCCCCTTCCCAGCCTCTGCCCTGCCTAGATGTAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79201 108 + 372756 CCCAGAGGGAGCCCTGCTCA-----------------------GAGTATCAGGCAGGGTCAGCTATTGCTGTGCCAGATGAGGTGAGCTCTGTAGTGTCTCCTTCCCAGCCTCTGCCCT-CCTAGAAGTAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314457 109 + 16356641 CCCAGAGGGAGCTGTGCTCA-----------------------GAGTATCAGGCGGGGTCAGCTAGGGCTGTGCCAGATGAGGTGAGCTCTGTAGCGTCTCCTTCCCAGCCTCTGCCCTGCCTAGATGCAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183290 109 + 1231380 CCCAGAGGGAGCCCTGCTCA-----------------------GAGTATCAGGCAGGGTCAGCTATGGCTGTGCCAGATGAGGTGAGCTCTGTAGTGTCTCCCTCCCAGCCTCTTCCCTGCCTAGATGTAAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715073 109 + 11732439 CCCAGAGGGAGCCCTGCTCA-----------------------GAGTATCAGGCAGGGTCAGCTACGGCCGTGCCAGATGAGGTGAGCTCTGGAGTGGCTCCTTCCCAGCCTCTGGCCTGCCTACATGTGGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22878903 63 + 22939663 CCCAAATCACGCCTT-CCCA----------------------------------------------------GCCAGG----------------GTGTCACCTTCCCAGCCCCTGCCCTTACCAGATGAAGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821640 119 + 182113224 CCCAGAGGAATAGCACCTTGAGGCATCAATGCTCTGGTTCTTTAGG----ACCCGTGGGCAGCCATGACT--GCCTAGTAGGGAAGGCTCTGAGAGGGCACCTGCCTGGGCCC-------CTTTCATGTAGT i mm10.chr2 I 4 C 0 e proCoq1.NW_012150197v1 1890294 173 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56895573 255 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66478142 814 + 66533130 I a score=151449.000000 s hg38.chr20_KI270870v1_alt 143082 20 + 183433 ---TTCTTTTTCCCCATAGAACA s gorGor5.CYUI01015848v1 533558 20 - 578057 ---TTCTTTTTCCCCATAGAACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055787 20 - 110113093 ---TTCTTTTTCCCCATAGAACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789135 20 - 92844088 ---TTCTGTTTCCCCGTAGAACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455182 20 + 96509753 ---TTCTGTTTCCCCGTAGAACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927255 20 - 16982598 ---TTCTGTTTCCCCGTAGAACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729364 20 - 3785965 ---TTCTTTTTCCCCGTAGAACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307324 20 - 90373283 ---TTCTTTTTCCCCGTAGAACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122163 20 - 179258 ---TTCTTTTTCCCCGTAGAACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597586 20 - 5823884 ---TTCTTTTTCCCCATAGAACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79309 20 + 372756 ---TTCTTTTTCCCCATAGAACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314566 20 + 16356641 ---TTCTTTTCCCCCATAGAACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183399 20 + 1231380 ---TTCTTCTTCCCCATAGAACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715182 20 + 11732439 ---TTCTTTTTCCCCATAGAACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22878966 20 + 22939663 ---TTCTTTTACCCCAGGAAGTG i otoGar3.GL873542 C 0 I 18 s mm10.chr2 181821759 20 + 182113224 GCATCCTTGCTCACCAGGCA--- i mm10.chr2 C 0 I 17 e proCoq1.NW_012150197v1 1890294 173 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56895573 255 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62144000 3948 + 62195757 M e panTro5.chr20 66478142 814 + 66533130 I a score=449819.000000 s hg38.chr20_KI270870v1_alt 143102 49 + 183433 CAGTTTGGCCATAGGG---------AGGCCCTCCAGGTCATCTAGGTGAGGTGGAACA--- s gorGor5.CYUI01015848v1 533578 48 - 578057 CAGTTTGGCCATAGGG---------AGGCCCTCC-GGTCATCTAGGTGAGGTGGAACA--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055807 49 - 110113093 CAGTTTGGCCATAGGG---------AGGCCCTCCGGGTCATCTAGGTGAGGTGGAACG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789155 57 - 92844088 CAGTTTGGCCATAGGGAGGCCACCTAGGCCCTCCGGGTCATCTAGGTGAGGTGG-ACA--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455202 57 + 96509753 CAGTTTGGCCATAGGGAGGCCACCTAGGCCCTCCGGGTCATCTAGGTGAGGTGG-ACA--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927275 57 - 16982598 CAGTTTGGCCATAGGGAGGCCACCTAGGCCCTCCGGGTCATCTAGGTGAGGTGG-ACA--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729384 48 - 3785965 CAGTATGGCCATAGGG---------AGGCCCTCCGGGTCATCTAGGTGAGGTGG-ACA--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307344 48 - 90373283 CAGTTTGGCCGTAGGG---------AGGCCCTCCGGGTCATCTAGGTGAGGTGG-ACA--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122183 48 - 179258 CAGTTTGGCCATAGGG---------AGGCCCTCCGGGTCATCTAGGTGAGGTGG-ACA--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597606 48 - 5823884 CAGTTTGGCCATAGGG---------AGGCCCTCCGGGTCATCTAGGTGAGGTGA-ACA--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79329 49 + 372756 CAGTTTGGCCATAGGG---------AGGCCCTCTGGGTGATCTAGGCAAGGGGGAACA--- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314586 49 + 16356641 CAGTTTGGCCATAGGG---------ACGCCCTCCAGGTGACCTAGGTGAGGTGGAACA--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183419 49 + 1231380 CAGTTTGGCCATAGGG---------AGGCCCTCCGGGTGATCTGGGTGAGGTGGAACG--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715202 49 + 11732439 CAGTTTGGCCATAGGG---------AGGCCCTCCGGGTGGTCTAGGTGAGGTGGAACA--- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1890467 49 - 2029793 CAGTTTGGCCATAGGA---------AGGCTCCCAGGGTCATCTGGGTGAGATGGAACT--- i proCoq1.NW_012150197v1 I 173 C 0 s otoGar3.GL873542 22879004 49 + 22939663 CAATTTGACCATAGGA---------AGGCTCTCAGGGTCATCTGGGTAAGATGCAACT--- i otoGar3.GL873542 I 18 C 0 s mm10.chr2 181821796 52 + 182113224 CAATGTCACCATAGGG---------AAGCATGCAGGGTCATCTGGGTGAGATGGAATAGAA i mm10.chr2 I 17 C 0 e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56895573 255 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62144000 3948 + 62195757 M e panTro5.chr20 66478142 814 + 66533130 I a score=55374.000000 s hg38.chr20_KI270870v1_alt 143151 6 + 183433 TGCCTT s gorGor5.CYUI01015848v1 533626 6 - 578057 TGCCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055856 6 - 110113093 TGCCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789212 6 - 92844088 TGCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455259 6 + 96509753 TGCTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927332 6 - 16982598 TGCTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729432 6 - 3785965 TGCCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307392 6 - 90373283 TGCCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122231 6 - 179258 TGCCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597654 6 - 5823884 TACCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79378 6 + 372756 TGCCTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314635 6 + 16356641 TGCCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183468 6 + 1231380 TGCCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715251 6 + 11732439 TGCCTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1890516 6 - 2029793 TGCCTT i proCoq1.NW_012150197v1 C 0 I 770 s otoGar3.GL873542 22879053 6 + 22939663 GGCCTA i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56895573 255 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62144000 3948 + 62195757 M e panTro5.chr20 66478142 814 + 66533130 I a score=53861.000000 s hg38.chr20_KI270870v1_alt 143157 7 + 183433 CTGTTAA s gorGor5.CYUI01015848v1 533632 7 - 578057 CTGTTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055862 7 - 110113093 CTGTTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789218 7 - 92844088 CTGTTAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455265 7 + 96509753 CTGTTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927338 7 - 16982598 CTGTTAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729438 7 - 3785965 CTGTTAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307398 7 - 90373283 CTGTTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122237 7 - 179258 CTGTTAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597660 7 - 5823884 CTGTTAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79384 7 + 372756 CTATTAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314641 7 + 16356641 CTATTAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183474 7 + 1231380 CTATTAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715257 7 + 11732439 CTATTAA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22879059 7 + 22939663 GTACTGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56895573 255 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62144000 3948 + 62195757 M e panTro5.chr20 66478142 814 + 66533130 I a score=9100.000000 s hg38.chr20_KI270870v1_alt 143164 1 + 183433 C s gorGor5.CYUI01015848v1 533639 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055869 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789225 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455272 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927345 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729445 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307405 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122244 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597667 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79391 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1183481 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715264 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22879066 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56895573 255 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62144000 3948 + 62195757 M e saiBol1.JH378156 16314648 0 + 16356641 C e panTro5.chr20 66478142 814 + 66533130 I a score=74258.000000 s hg38.chr20_KI270870v1_alt 143165 9 + 183433 CCGTAATGT s gorGor5.CYUI01015848v1 533640 9 - 578057 CCGTAATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055870 9 - 110113093 CCATAATGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789226 9 - 92844088 CCATAATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455273 9 + 96509753 CCATAATGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927346 9 - 16982598 CCATAATGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729446 9 - 3785965 CCATAATGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307406 9 - 90373283 CCATAATGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122245 9 - 179258 CCATAATGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597668 9 - 5823884 CCATAATGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79392 9 + 372756 CCATAATGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314648 9 + 16356641 CCATAGTAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183482 9 + 1231380 CCACAGTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715265 9 + 11732439 CCATAATGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22879067 9 + 22939663 CCATAAAGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56895573 255 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62144000 3948 + 62195757 M e panTro5.chr20 66478142 814 + 66533130 I a score=72735.000000 s hg38.chr20_KI270870v1_alt 143174 7 + 183433 GTGACCC s panPan2.chr20 62147956 7 + 62195757 GTGACCC i panPan2.chr20 M 3948 C 0 s gorGor5.CYUI01015848v1 533649 7 - 578057 GTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055879 7 - 110113093 GTGACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789235 7 - 92844088 GTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455282 7 + 96509753 GTGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927355 7 - 16982598 GTGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729455 7 - 3785965 GTGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307415 7 - 90373283 GTGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122254 7 - 179258 GTGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597677 7 - 5823884 GTAACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79401 7 + 372756 GTGACCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314657 7 + 16356641 GTGACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183491 7 + 1231380 GTGACCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715274 7 + 11732439 GTGACCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22879076 7 + 22939663 ATGACAT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56895573 255 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66478142 814 + 66533130 I a score=35925.000000 s hg38.chr20_KI270870v1_alt 143181 3 + 183433 TGG s panPan2.chr20 62147963 3 + 62195757 TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533656 3 - 578057 TGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055886 3 - 110113093 TGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789242 3 - 92844088 TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455289 3 + 96509753 TGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927362 3 - 16982598 TGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729462 3 - 3785965 TGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307422 3 - 90373283 TGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122261 3 - 179258 TGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597684 3 - 5823884 TGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79408 3 + 372756 TGG i calJac3.chrUn_GL286459 C 0 I 2 s saiBol1.JH378156 16314664 3 + 16356641 CGG i saiBol1.JH378156 C 0 I 3 s cebCap1.NW_016107870v1 1183498 3 + 1231380 CGG i cebCap1.NW_016107870v1 C 0 I 3 s aotNan1.NW_018500483v1 2715281 3 + 11732439 TGG i aotNan1.NW_018500483v1 C 0 I 41 s micMur3.chr18 56895828 3 + 57149010 TGG i micMur3.chr18 I 255 C 0 s otoGar3.GL873542 22879083 3 + 22939663 TGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panTro5.chr20 66478142 814 + 66533130 I a score=12709.000000 s hg38.chr20_KI270870v1_alt 143184 2 + 183433 GC s panPan2.chr20 62147966 2 + 62195757 GC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533659 2 - 578057 GC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055889 2 - 110113093 GC i nomLeu3.chr13 C 0 T 20 s rheMac8.chr10 92789245 2 - 92844088 GC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455292 2 + 96509753 GC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927365 2 - 16982598 GC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729465 2 - 3785965 GC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307425 2 - 90373283 GC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122264 2 - 179258 GC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597687 2 - 5823884 GC i colAng1.NW_012114444v1 C 0 C 0 s micMur3.chr18 56895831 2 + 57149010 AC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879086 2 + 22939663 AC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314667 3 + 16356641 I e cebCap1.NW_016107870v1 1183501 3 + 1231380 I e calJac3.chrUn_GL286459 79411 2 + 372756 I e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I a score=87233.000000 s hg38.chr20_KI270870v1_alt 143186 11 + 183433 TGGCCGTGGTG s panPan2.chr20 62147968 11 + 62195757 TGGCCGTGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533661 11 - 578057 TGGCCATGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789247 11 - 92844088 TGGCCGTGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455294 11 + 96509753 TGGCCGTGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16927367 11 - 16982598 TGGCCGTGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729467 11 - 3785965 TGGTCATGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307427 11 - 90373283 TGGTCATGGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122266 11 - 179258 TGGTCATGGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5597689 11 - 5823884 TGGTCATGGTG i colAng1.NW_012114444v1 C 0 I 486 s calJac3.chrUn_GL286459 79413 11 + 372756 TGGTCATGGTG i calJac3.chrUn_GL286459 I 2 C 0 s saiBol1.JH378156 16314670 11 + 16356641 TGATGATGGTG i saiBol1.JH378156 I 3 C 0 s cebCap1.NW_016107870v1 1183504 11 + 1231380 TGATCATGGTG i cebCap1.NW_016107870v1 I 3 C 0 s micMur3.chr18 56895833 11 + 57149010 TGGCCATGGTG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879088 11 + 22939663 TGATCATGGTT i otoGar3.GL873542 C 0 T 24 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=-2344.000000 s hg38.chr20_KI270870v1_alt 143197 1 + 183433 G s panPan2.chr20 62147979 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533672 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789258 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455305 1 + 96509753 G i macFas5.chr10 C 0 I 190 s macNem1.NW_012014244v1 16927378 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729478 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 I 46 s chlSab2.chr2 90307438 1 - 90373283 T i chlSab2.chr2 C 0 I 70 s manLeu1.NW_012101652v1 122277 1 - 179258 T i manLeu1.NW_012101652v1 C 0 I 20 s calJac3.chrUn_GL286459 79424 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314681 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183515 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56895844 1 + 57149010 T i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879075 1 + 22939663 C i otoGar3.GL873542 T 24 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5597700 486 - 5823884 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=96223.000000 s hg38.chr20_KI270870v1_alt 143198 17 + 183433 GTGACCCTGGGCTGGCC s panPan2.chr20 62147980 17 + 62195757 GTGACCCTGGGCTGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533673 17 - 578057 GTGACCCTGGGCTGGCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789259 17 - 92844088 GTGACCCTGGGCTGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455496 17 + 96509753 GTGACCCTGGGCTGGTC i macFas5.chr10 I 190 C 0 s macNem1.NW_012014244v1 16927379 17 - 16982598 GTGACCCTGGGCTGGCC i macNem1.NW_012014244v1 C 0 I 2528 s cerAty1.NW_012001373v1 3729525 17 - 3785965 GTGACCCTGGCCTTGTC i cerAty1.NW_012001373v1 I 46 C 0 s chlSab2.chr2 90307509 17 - 90373283 GTGACCCTGGGCTGGCC i chlSab2.chr2 I 70 C 0 s manLeu1.NW_012101652v1 122298 8 - 179258 GTGACCCC--------- i manLeu1.NW_012101652v1 I 20 C 0 s colAng1.NW_012114444v1 5598186 17 - 5823884 GTGACCCTGGGATGTTC i colAng1.NW_012114444v1 I 486 C 0 s calJac3.chrUn_GL286459 79425 17 + 372756 CTGACCCCAGACTATCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314682 17 + 16356641 GTGACCCTCGTCTGGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183516 17 + 1231380 GTGACCCTCGTCTGGCC i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56895845 17 + 57149010 ATGACATTGGACTGGCC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879076 17 + 22939663 ATGACATTGGACTGATC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=64725.000000 s hg38.chr20_KI270870v1_alt 143215 13 + 183433 GTGGTGGGTGACC s panPan2.chr20 62147997 13 + 62195757 GTGGTGGGTGACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533690 13 - 578057 GTGGTGGGTGACC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789276 13 - 92844088 GTGGTATGTGACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96455513 13 + 96509753 ATGGTGTCTGACC i macFas5.chr10 C 0 I 598 s macNem1.NW_012014244v1 16929924 13 - 16982598 GTGGTGGGTGACC i macNem1.NW_012014244v1 I 2528 C 0 s cerAty1.NW_012001373v1 3729542 13 - 3785965 ATGGTGCGTGACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307526 13 - 90373283 GTGGTGGGTGATC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122306 9 - 179258 ----TAGACTATC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598203 13 - 5823884 ATGGTGGGTGACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79442 10 + 372756 ATGTTG---ACCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314699 13 + 16356641 CTGGTAGGTGACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183533 13 + 1231380 CTGGTAGGTGACC i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56895862 13 + 57149010 ATGGTGTGTGACC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879093 13 + 22939663 ATGGTTTATGACC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=54536.000000 s hg38.chr20_KI270870v1_alt 143228 10 + 183433 CTGGGCTGGC s panPan2.chr20 62148010 10 + 62195757 CTGGGATGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533703 10 - 578057 CTGGGCTGGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789289 10 - 92844088 CTGGGCTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456124 10 + 96509753 CTGGGATGGC i macFas5.chr10 I 598 C 0 s macNem1.NW_012014244v1 16929937 10 - 16982598 CAGGGCTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729555 10 - 3785965 CTGGGCTGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307539 10 - 90373283 CAGGGCTGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122315 1 - 179258 ---------C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598216 10 - 5823884 CTGGGCTGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79452 10 + 372756 CTAGACTAGC i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16314712 10 + 16356641 CTGGACTGGC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1183546 10 + 1231380 CTGTACTGGC i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56895875 10 + 57149010 TTGGACGGGC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879106 10 + 22939663 TTGGGCTAGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=39906.000000 s hg38.chr20_KI270870v1_alt 143238 7 + 183433 CGTGGTG s panPan2.chr20 62148020 7 + 62195757 CATGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533713 7 - 578057 CGTGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789299 7 - 92844088 CATGGTG i rheMac8.chr10 C 0 I 142 s macFas5.chr10 96456134 7 + 96509753 TGTGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929947 7 - 16982598 CCTGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729565 7 - 3785965 CGTGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307549 7 - 90373283 CGTGGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122316 7 - 179258 CATAGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598226 7 - 5823884 CGTGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79463 7 + 372756 CATAGTG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16314723 6 + 16356641 C-TGGTG i saiBol1.JH378156 I 1 C 0 s micMur3.chr18 56895885 7 + 57149010 CATGGTG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879116 7 + 22939663 CATGCTG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=82025.000000 s hg38.chr20_KI270870v1_alt 143245 13 + 183433 GGTGACCCTGGGC s panPan2.chr20 62148027 13 + 62195757 GGTGACCCTGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533720 13 - 578057 GGTGACCCTGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789448 13 - 92844088 TGTGACCCTGGGC i rheMac8.chr10 I 142 C 0 s macFas5.chr10 96456141 13 + 96509753 GGTGACCCAGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929954 13 - 16982598 GGTGACCCTGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729572 13 - 3785965 GGTGACCCTGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307556 13 - 90373283 GGTGACCCTGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122323 13 - 179258 TGTGACCCTGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598233 13 - 5823884 GGTGACCCTGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79470 13 + 372756 TGTGACCCTGGAC i calJac3.chrUn_GL286459 C 0 I 49 s saiBol1.JH378156 16314729 13 + 16356641 TGTGACCCTACAC i saiBol1.JH378156 C 0 I 3 s micMur3.chr18 56895892 13 + 57149010 TGTGACCTTGGAC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879123 13 + 22939663 TCTGACCCTGCCC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=15343.000000 s hg38.chr20_KI270870v1_alt 143258 3 + 183433 TGG s panPan2.chr20 62148040 3 + 62195757 TGG i panPan2.chr20 C 0 T 48 s gorGor5.CYUI01015848v1 533733 3 - 578057 TGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789461 3 - 92844088 TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456154 3 + 96509753 TGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929967 3 - 16982598 TGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729585 3 - 3785965 TGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307569 3 - 90373283 TGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122336 3 - 179258 TTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598246 3 - 5823884 TGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79532 3 + 372756 TGA i calJac3.chrUn_GL286459 I 49 C 0 s saiBol1.JH378156 16314745 3 + 16356641 TGA i saiBol1.JH378156 I 3 C 0 s micMur3.chr18 56895905 3 + 57149010 GGG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879136 3 + 22939663 TGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=84694.000000 s hg38.chr20_KI270870v1_alt 143261 15 + 183433 CTGTGGTATGTGACC s panPan2.chr20 62147995 15 + 62195757 CCGTGGTGGGTGACC i panPan2.chr20 T 48 C 0 s gorGor5.CYUI01015848v1 533736 15 - 578057 CTGTGGTATGTGACC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789464 15 - 92844088 TCATGGTGTCTGACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456157 15 + 96509753 TCGTGGTGGGTGACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929970 15 - 16982598 CCGTGGTATGTGACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729588 15 - 3785965 CCATGGTGGGTGACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307572 15 - 90373283 CCGTGGTGGGTGACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122339 15 - 179258 TCATGGTGCGTGACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598249 15 - 5823884 CTGTGGTAGGTGACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79535 15 + 372756 TCATGGTGTGTGACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314748 13 + 16356641 --ATGATATGTGACC i saiBol1.JH378156 C 0 T 116 s micMur3.chr18 56895908 15 + 57149010 CCATGGTGTGTGACC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879139 15 + 22939663 TCACAGTGTGGGACC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=21248.000000 s hg38.chr20_KI270870v1_alt 143276 6 + 183433 CTGGGC s panPan2.chr20 62148010 6 + 62195757 CTGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533751 6 - 578057 CTGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789479 6 - 92844088 CCAAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456172 6 + 96509753 CTGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929985 6 - 16982598 CTGGGC i macNem1.NW_012014244v1 C 0 I 96 s cerAty1.NW_012001373v1 3729603 6 - 3785965 CTGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307587 6 - 90373283 CAGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122354 6 - 179258 CTGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598264 6 - 5823884 CTGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79550 6 + 372756 CTTGTC i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56895923 6 + 57149010 TTGGAC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879154 6 + 22939663 CTGTCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=47632.000000 s hg38.chr20_KI270870v1_alt 143282 13 + 183433 TGGCC-GTGGTGGG s panPan2.chr20 62148016 13 + 62195757 TGGTC-ATGGTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533757 13 - 578057 TGGCC-GTGGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789485 13 - 92844088 TAGTC-GTGGTGAC i rheMac8.chr10 C 0 I 208 s macFas5.chr10 96456178 13 + 96509753 TGGTC-TTTGTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930087 13 - 16982598 TGGCC-GTGGTGGG i macNem1.NW_012014244v1 I 96 C 0 s cerAty1.NW_012001373v1 3729609 13 - 3785965 TGTCC-GTGGTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307593 13 - 90373283 TGGTC-GTGGCAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122360 13 - 179258 TGGCC-GTGGTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598270 12 - 5823884 TGGCC-ATGGTGG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79556 13 + 372756 TGGCT-CTGGTAGG i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56895929 13 + 57149010 TGGCC-ATGGTGTA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879160 14 + 22939663 TGGTCAATGATATG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=24460.000000 s hg38.chr20_KI270870v1_alt 143295 5 + 183433 TGACC s panPan2.chr20 62148029 5 + 62195757 TGACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533770 5 - 578057 TGACC i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96456191 5 + 96509753 TGACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930100 5 - 16982598 TGACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729622 5 - 3785965 TGACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307606 5 - 90373283 TGACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122373 5 - 179258 TGACC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 79569 5 + 372756 TGACC i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56895942 5 + 57149010 TGACC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879174 5 + 22939663 GGACC i otoGar3.GL873542 C 0 T 127 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598282 0 - 5823884 C e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T e rheMac8.chr10 92789498 208 - 92844088 I a score=3985.000000 s hg38.chr20_KI270870v1_alt 143300 2 + 183433 CT s panPan2.chr20 62148034 2 + 62195757 CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533775 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96456196 2 + 96509753 CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930105 2 - 16982598 CT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729627 2 - 3785965 CA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307611 2 - 90373283 CT i chlSab2.chr2 C 0 I 14917 s manLeu1.NW_012101652v1 122378 2 - 179258 CN i manLeu1.NW_012101652v1 C 0 M 46 s calJac3.chrUn_GL286459 79574 2 + 372756 CT i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56895947 2 + 57149010 TT i micMur3.chr18 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598282 0 - 5823884 C e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T e rheMac8.chr10 92789498 208 - 92844088 I e otoGar3.GL873542 22879179 127 + 22939663 T a score=19550.000000 s hg38.chr20_KI270870v1_alt 143302 7 + 183433 GAGCTGG s panPan2.chr20 62148036 7 + 62195757 GGGCTGG i panPan2.chr20 C 0 T 87 s gorGor5.CYUI01015848v1 533777 7 - 578057 GAGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96456198 7 + 96509753 GGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930107 7 - 16982598 GGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729629 7 - 3785965 GGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322530 7 - 90373283 GGGCTGG i chlSab2.chr2 I 14917 C 0 s calJac3.chrUn_GL286459 79576 7 + 372756 GGACTGG i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56895949 7 + 57149010 GGACGGG i micMur3.chr18 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598282 0 - 5823884 C e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122380 46 - 179258 M e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T e rheMac8.chr10 92789498 208 - 92844088 I e otoGar3.GL873542 22879179 127 + 22939663 T a score=2800.000000 s hg38.chr20_KI270870v1_alt 143309 1 + 183433 C s gorGor5.CYUI01015848v1 533784 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 I 5 s macFas5.chr10 96456205 1 + 96509753 C i macFas5.chr10 C 0 I 5 s macNem1.NW_012014244v1 16930114 1 - 16982598 C i macNem1.NW_012014244v1 C 0 I 5 s cerAty1.NW_012001373v1 3729636 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 I 234 s chlSab2.chr2 90322537 1 - 90373283 C i chlSab2.chr2 C 0 I 8 s calJac3.chrUn_GL286459 79583 1 + 372756 C i calJac3.chrUn_GL286459 C 0 T 116 s micMur3.chr18 56895956 1 + 57149010 C i micMur3.chr18 C 0 I 5 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598282 0 - 5823884 C e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 87 + 62195757 T e manLeu1.NW_012101652v1 122380 46 - 179258 M e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T e rheMac8.chr10 92789498 208 - 92844088 I e otoGar3.GL873542 22879179 127 + 22939663 T a score=924.000000 s hg38.chr20_KI270870v1_alt 143310 3 + 183433 TGA s gorGor5.CYUI01015848v1 533790 3 - 578057 TGG i gorGor5.CYUI01015848v1 I 5 C 0 s rheMac8.chr10 92789706 3 - 92844088 TGT i rheMac8.chr10 I 208 C 0 s macFas5.chr10 96456211 3 + 96509753 TAT i macFas5.chr10 I 5 C 0 s macNem1.NW_012014244v1 16930120 3 - 16982598 TGG i macNem1.NW_012014244v1 I 5 C 0 s cerAty1.NW_012001373v1 3729871 3 - 3785965 TGG i cerAty1.NW_012001373v1 I 234 C 0 s manLeu1.NW_012101652v1 122426 3 - 179258 NNN i manLeu1.NW_012101652v1 M 46 C 0 s calJac3.chrUn_GL286459 79468 3 + 372756 TGT i calJac3.chrUn_GL286459 T 116 C 0 s micMur3.chr18 56895962 3 + 57149010 TGT i micMur3.chr18 I 5 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598282 0 - 5823884 C e chlSab2.chr2 90322538 8 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 87 + 62195757 T e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T e otoGar3.GL873542 22879179 127 + 22939663 T a score=6600.000000 s hg38.chr20_KI270870v1_alt 143313 1 + 183433 G s panPan2.chr20 62147956 1 + 62195757 G i panPan2.chr20 T 87 C 0 s gorGor5.CYUI01015848v1 533793 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789709 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456214 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930123 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729874 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322546 1 - 90373283 G i chlSab2.chr2 I 8 C 0 s manLeu1.NW_012101652v1 122429 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598282 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79471 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56895965 1 + 57149010 G i micMur3.chr18 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T e otoGar3.GL873542 22879179 127 + 22939663 T a score=82115.000000 s hg38.chr20_KI270870v1_alt 143314 23 + 183433 TGACCCTGGGCTGG-CCGTGGTAT s panPan2.chr20 62147957 23 + 62195757 TGACCCTGGGCTGG-CCGTGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533794 24 - 578057 TGACCCGGGGCTGGCCCATGGTAT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789710 23 - 92844088 TGACCCTGGCCTTG-TCATGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456215 23 + 96509753 TGACCCTGGGCTGG-CCGTGGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930124 23 - 16982598 TGACCCTGGGCTGG-CCGTGGTAT i macNem1.NW_012014244v1 C 0 T 216 s cerAty1.NW_012001373v1 3729875 23 - 3785965 TGACCCTGGGCTGG-CCATGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322547 23 - 90373283 TGACTCTGGGCTGG-CCGTGGTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122430 7 - 179258 TGACCCT----------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598283 23 - 5823884 TGATGCTGGACTGG-CCGTGGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79472 23 + 372756 TGACCCTGGACTGG-TCATGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56895966 23 + 57149010 TGACCTTGGACTGG-CCATGGTGT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879052 24 + 22939663 TGGCCTAGTACTGGCCCATAAAGC i otoGar3.GL873542 T 127 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=34904.000000 s hg38.chr20_KI270870v1_alt 143337 8 + 183433 GTGACCCG s panPan2.chr20 62147980 8 + 62195757 GTGACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533818 8 - 578057 GTGACCCG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789733 8 - 92844088 GTGACCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456238 8 + 96509753 GTGACCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929931 8 - 16982598 GTGACCCA i macNem1.NW_012014244v1 T 216 C 0 s cerAty1.NW_012001373v1 3729898 8 - 3785965 ATGACCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322570 8 - 90373283 GTGACTCT i chlSab2.chr2 C 0 T 14965 s colAng1.NW_012114444v1 5598306 8 - 5823884 GTGACCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79495 8 + 372756 GTGACCCT i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56895989 8 + 57149010 GTGACCTT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879076 8 + 22939663 ATGACATT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122437 0 - 179258 C e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=28309.000000 s hg38.chr20_KI270870v1_alt 143345 4 + 183433 GGGC s panPan2.chr20 62147988 4 + 62195757 GGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533826 4 - 578057 GGGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789741 4 - 92844088 GGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456246 4 + 96509753 GGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929939 4 - 16982598 GGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729906 4 - 3785965 GGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307613 4 - 90373283 GGGC i chlSab2.chr2 T 14965 C 0 s manLeu1.NW_012101652v1 122437 4 - 179258 GGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598314 4 - 5823884 GGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79503 4 + 372756 GGGC i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56895997 4 + 57149010 GGAC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879084 4 + 22939663 GGAC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=34511.000000 s hg38.chr20_KI270870v1_alt 143349 6 + 183433 TGGCCG s panPan2.chr20 62147992 6 + 62195757 TGGCCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533830 6 - 578057 TGGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789745 6 - 92844088 TGGTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456250 6 + 96509753 TGGCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929943 6 - 16982598 TGGCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729910 6 - 3785965 TGGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307617 6 - 90373283 TGGCCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122441 6 - 179258 TGGCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598318 6 - 5823884 TGGCCG i colAng1.NW_012114444v1 C 0 T 144 s calJac3.chrUn_GL286459 79507 6 + 372756 TGGCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314645 6 + 16356641 TAACCA i saiBol1.JH378156 T 116 C 0 s micMur3.chr18 56896001 6 + 57149010 TGGCCA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879088 6 + 22939663 TGATCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=8281.000000 s hg38.chr20_KI270870v1_alt 143355 1 + 183433 T s panPan2.chr20 62147998 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533836 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789751 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456256 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929949 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729916 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307623 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122447 1 - 179258 T i manLeu1.NW_012101652v1 C 0 I 168 s colAng1.NW_012114444v1 5598180 1 - 5823884 T i colAng1.NW_012114444v1 T 144 C 0 s calJac3.chrUn_GL286459 79513 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314651 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56896007 1 + 57149010 T i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879094 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=-20562.000000 s hg38.chr20_KI270870v1_alt 143356 5 + 183433 GG----------------------------------------------------------------------------------------------TAT s panPan2.chr20 62147999 5 + 62195757 GG----------------------------------------------------------------------------------------------TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533837 5 - 578057 GG----------------------------------------------------------------------------------------------TAT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789752 5 - 92844088 GG----------------------------------------------------------------------------------------------TGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456257 99 + 96509753 GGTATGTGACCCTGGGCTGGTCATGGTGTCTGACCCCAAACTAGTCGTGGTGACCCCTAGACTATCCCATAGTGTGTGACCTTGGCCTTGTCATGATGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929950 5 - 16982598 GG----------------------------------------------------------------------------------------------TGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729917 5 - 3785965 AG----------------------------------------------------------------------------------------------TAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307624 5 - 90373283 GG----------------------------------------------------------------------------------------------CAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122616 5 - 179258 GG----------------------------------------------------------------------------------------------TAT i manLeu1.NW_012101652v1 I 168 C 0 s colAng1.NW_012114444v1 5598181 5 - 5823884 GG----------------------------------------------------------------------------------------------TAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79514 5 + 372756 GG----------------------------------------------------------------------------------------------CAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314652 5 + 16356641 AG----------------------------------------------------------------------------------------------TAT i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56896008 5 + 57149010 GG----------------------------------------------------------------------------------------------TGT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879095 5 + 22939663 GG----------------------------------------------------------------------------------------------TTT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=82394.000000 s hg38.chr20_KI270870v1_alt 143361 16 + 183433 GTGACCCTGGGATGGT s panPan2.chr20 62148004 16 + 62195757 GTGACCCTGGGATGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533842 16 - 578057 GTGACCCTGGGACGGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789757 16 - 92844088 GTAACCCTGGGCTGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456356 16 + 96509753 GTGACCCAGGGCTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929955 16 - 16982598 GTGACCCTGGGCTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729922 16 - 3785965 ATGACCCTGGGCTGGT i cerAty1.NW_012001373v1 C 0 T 301 s chlSab2.chr2 90307629 16 - 90373283 GTGACCCTGGGCTGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122621 16 - 179258 GTGACTCTGGGCTGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598186 16 - 5823884 GTGACCCTGGGATGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79519 16 + 372756 GTGACCCTGGGATTGA i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16314657 16 + 16356641 GTGACCCCGGGATTGA i saiBol1.JH378156 C 0 I 1 s otoGar3.GL873542 22879100 16 + 22939663 ATGACCTTGGGCTAGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055891 20 - 110113093 T a score=99318.000000 s hg38.chr20_KI270870v1_alt 143377 16 + 183433 CATGGTGTGTGACCCG s panPan2.chr20 62148020 16 + 62195757 CATGGTGGGTGACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533858 16 - 578057 CATGGTGTGTGACCCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055871 16 - 110113093 CATAATGTGTGACCCT i nomLeu3.chr13 T 20 C 0 s rheMac8.chr10 92789773 16 - 92844088 CGTGGTGGGTGACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456372 16 + 96509753 CGTGGTGGGTGACCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929971 16 - 16982598 CGTGGTATGTGACTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729637 16 - 3785965 CATGGTGGGTGACCCA i cerAty1.NW_012001373v1 T 301 C 0 s chlSab2.chr2 90307645 16 - 90373283 CGTGGTATGTGACTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122637 16 - 179258 CGTGGTGGGTGACCCT i manLeu1.NW_012101652v1 C 0 T 120 s colAng1.NW_012114444v1 5598202 16 - 5823884 CATGGTGGGTGACCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79536 16 + 372756 CATGGTGTGTGACCCT i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16314674 16 + 16356641 GATGGTGTGTGACCCT i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22879116 16 + 22939663 CATGCTGTCTGACCCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I a score=44321.000000 s hg38.chr20_KI270870v1_alt 143393 7 + 183433 GGGCTGG s panPan2.chr20 62148036 7 + 62195757 GGGCTGG i panPan2.chr20 C 0 T 95 s gorGor5.CYUI01015848v1 533874 7 - 578057 GGGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055887 7 - 110113093 GGGCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92789789 7 - 92844088 GGGCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456388 7 + 96509753 GGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929987 7 - 16982598 GGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729653 7 - 3785965 GGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307661 7 - 90373283 GGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122533 7 - 179258 GGGCTGG i manLeu1.NW_012101652v1 T 120 C 0 s colAng1.NW_012114444v1 5598218 7 - 5823884 GGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79552 7 + 372756 TGTCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314690 7 + 16356641 CGTCTGG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879132 7 + 22939663 GCCCTGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I a score=135819.000000 s hg38.chr20_KI270870v1_alt 143400 24 + 183433 CCATGGTGGGTGACCCCGAGCTGG s gorGor5.CYUI01015848v1 533881 24 - 578057 CCATGGTGGGTGACCCTGAGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055894 24 - 110113093 TCATGGTGGGTGACCCTGGGCTGG i nomLeu3.chr13 C 0 T 48 s rheMac8.chr10 92789796 24 - 92844088 CCGTGGTGGGTGACCCTGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456395 24 + 96509753 TCGTGGTGGGTGACCCTGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929994 24 - 16982598 CCGTGGTGGGTGACCCTGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729660 24 - 3785965 CCGTGGTGGGTGACCCAGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307668 24 - 90373283 CCGTGGTATGTGACTCTGGGTTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122540 24 - 179258 CCGTGGTGGGTGACCCTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598225 24 - 5823884 CCGTGGTGGGTGACCCTGGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79559 24 + 372756 CTCTGGTAGGTGACCCTGGACTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314697 24 + 16356641 CCCTGGTAGGTGACCCTGGACTGG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879139 24 + 22939663 TCACAGTGTGGGACCCTGTCTTGG i otoGar3.GL873542 C 0 T 154 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 95 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I a score=4190.000000 s hg38.chr20_KI270870v1_alt 143424 1 + 183433 C s gorGor5.CYUI01015848v1 533905 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789820 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456419 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930018 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729684 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307692 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122564 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598249 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79583 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314721 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 95 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=103880.000000 s hg38.chr20_KI270870v1_alt 143425 23 + 183433 TGTGGTGGGTGACCCTGGGCTGG s panPan2.chr20 62147948 23 + 62195757 TGTGGTGGGTGACCCTGGGCTGG i panPan2.chr20 T 95 C 0 s gorGor5.CYUI01015848v1 533906 23 - 578057 CGTGGTGGGTGACCCTGAGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789821 23 - 92844088 CGTGGTGGGTGACCCTGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456420 23 + 96509753 CGTGGTGGGTGACCCTGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930019 23 - 16982598 TGTGGTGGGTGACCCTGGGTTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729685 23 - 3785965 CGTGGTGGGTGACCCAGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307693 23 - 90373283 CGTGGTGGGTGACCCTGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122565 23 - 179258 CGTGGTATGTGACTCTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598250 23 - 5823884 TGTGGTAGGTGACCCTGGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79584 15 + 372756 TCTGGTGTGTGACCC-------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314722 23 + 16356641 TCTGGTGTGTGACCCTACACTGG i saiBol1.JH378156 C 0 T 76 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=94675.000000 s hg38.chr20_KI270870v1_alt 143448 25 + 183433 CCGTGGTGGGTGACCCTGGGATGGC s panPan2.chr20 62147971 25 + 62195757 CCGTGGTGGGTGACCCTGGGCTGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533929 25 - 578057 CCATGGTGGGTGACCCGGGGCTGGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789844 25 - 92844088 CCGTGGTGGGTGACCCTGGGCTGGC i rheMac8.chr10 C 0 I 386 s macFas5.chr10 96456443 25 + 96509753 TCGTGGTGGGTGACCCTGGGCTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930042 25 - 16982598 CCGTGGTGGATGACCCTGGGCTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729708 25 - 3785965 TCGTGGTGGGTGACCCTGGGCTGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307716 25 - 90373283 TCGTGGTGGGTGACCCTGGGCTGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122588 25 - 179258 CCGTGGTGGGTGACCCTGGGCTGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598273 25 - 5823884 CCATGGTGGGTGATGCTGGACTGGC i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 76 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 0 + 372756 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=20308.000000 s hg38.chr20_KI270870v1_alt 143473 8 + 183433 CGTGGTGG s panPan2.chr20 62147996 8 + 62195757 CGTGGTGG i panPan2.chr20 C 0 T 55 s gorGor5.CYUI01015848v1 533954 8 - 578057 CATGGTAT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92790255 8 - 92844088 CGTGGTGA i rheMac8.chr10 I 386 T 434 s macFas5.chr10 96456468 8 + 96509753 CTTTGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930067 8 - 16982598 CATAGTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729733 8 - 3785965 CGTGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307741 8 - 90373283 CGTGGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122613 8 - 179258 CGTGGTAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598298 8 - 5823884 CGTGGTGG i colAng1.NW_012114444v1 C 0 T 96 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 76 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 0 + 372756 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=30506.000000 s hg38.chr20_KI270870v1_alt 143481 11 + 183433 GTGACACTGGG s gorGor5.CYUI01015848v1 533962 11 - 578057 GTGACCCTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789829 11 - 92844088 GTGACCCTGGG i rheMac8.chr10 T 434 C 0 s macFas5.chr10 96456476 11 + 96509753 GTGACCCTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930075 11 - 16982598 ATGACCCTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729741 11 - 3785965 GTGACCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307749 11 - 90373283 GTGACCCAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122621 11 - 179258 GTGACTCTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598210 11 - 5823884 GTGACCCTGGG i colAng1.NW_012114444v1 T 96 C 0 s calJac3.chrUn_GL286459 79599 5 + 372756 ------CTACA i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148004 55 + 62195757 T e saiBol1.JH378156 16314745 76 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=17553.000000 s hg38.chr20_KI270870v1_alt 143492 6 + 183433 CTGGTG s gorGor5.CYUI01015848v1 533973 6 - 578057 ATGGTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789840 6 - 92844088 CTGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456487 6 + 96509753 CTGATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930086 6 - 16982598 CTGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729752 6 - 3785965 CTGGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307760 6 - 90373283 CTGGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122632 6 - 179258 CTGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598221 6 - 5823884 CTGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79604 6 + 372756 CTGGTG i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16314669 6 + 16356641 TTGATG i saiBol1.JH378156 T 76 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148004 55 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=81251.000000 s hg38.chr20_KI270870v1_alt 143498 17 + 183433 GTGGTGGGTGACCCTTG s panPan2.chr20 62147949 17 + 62195757 GTGGTGGGTGACCCTGG i panPan2.chr20 T 55 C 0 s gorGor5.CYUI01015848v1 533979 17 - 578057 ATGGTGGGTGACCCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789846 17 - 92844088 GTGGTGGGTGACCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456493 17 + 96509753 GTGGTGGGTGACCCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930092 17 - 16982598 GTGGTGGGTGACCCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729758 17 - 3785965 TTTGTGGGTGACCCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307766 17 - 90373283 GTGGCAGATGACCCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122638 17 - 179258 GTGGTGGGTGACCCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598227 17 - 5823884 GTGGTGGGTGACCCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79611 17 + 372756 ATGATATGTGACCTCTG i calJac3.chrUn_GL286459 I 1 T 74 s saiBol1.JH378156 16314675 17 + 16356641 ATGGTGTGTGACCCTCG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=28117.000000 s hg38.chr20_KI270870v1_alt 143515 5 + 183433 GCTGG s panPan2.chr20 62147966 5 + 62195757 GCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533996 5 - 578057 GCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789863 5 - 92844088 GCTGG i rheMac8.chr10 C 0 I 13 s macFas5.chr10 96456510 5 + 96509753 GCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930109 5 - 16982598 GCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729775 5 - 3785965 GCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307783 5 - 90373283 GCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122655 5 - 179258 GCTGG i manLeu1.NW_012101652v1 C 0 T 96 s colAng1.NW_012114444v1 5598244 5 - 5823884 GCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79554 5 + 372756 TCTGG i calJac3.chrUn_GL286459 T 74 C 0 s saiBol1.JH378156 16314692 5 + 16356641 TCTGG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=33614.000000 s hg38.chr20_KI270870v1_alt 143520 9 + 183433 CCATGGTGG s panPan2.chr20 62147971 9 + 62195757 CCGTGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534001 9 - 578057 CCGCGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789881 9 - 92844088 CCGTGGTGG i rheMac8.chr10 I 13 C 0 s macFas5.chr10 96456515 9 + 96509753 TCTTTGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930114 9 - 16982598 CCGTGGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729780 9 - 3785965 TCGTGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307788 9 - 90373283 CCGTGGCAG i chlSab2.chr2 C 0 I 14965 s manLeu1.NW_012101652v1 122564 9 - 179258 CCGTGGTAT i manLeu1.NW_012101652v1 T 96 C 0 s colAng1.NW_012114444v1 5598249 9 - 5823884 CTGTGGTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79559 9 + 372756 CTCTGGTAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314697 9 + 16356641 CCCTGGTAG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=6600.000000 s hg38.chr20_KI270870v1_alt 143529 1 + 183433 G s panPan2.chr20 62147980 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534010 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789890 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456524 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930123 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729789 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322762 1 - 90373283 G i chlSab2.chr2 I 14965 C 0 s manLeu1.NW_012101652v1 122573 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598258 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79568 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314706 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879163 154 + 22939663 T a score=56051.000000 s hg38.chr20_KI270870v1_alt 143530 11 + 183433 TGACCCTGGGA s panPan2.chr20 62147981 11 + 62195757 TGACCCTGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534011 11 - 578057 TGACCCTGGGA i gorGor5.CYUI01015848v1 C 0 T 213 s rheMac8.chr10 92789891 11 - 92844088 TGACCCTGGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456525 11 + 96509753 TGACCCTGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930124 11 - 16982598 TGACCCTGGGC i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90322763 11 - 90373283 TGACCCTGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122574 11 - 179258 TGACTCTGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598259 11 - 5823884 TGACCCTGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79569 11 + 372756 TGACCCTGGAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314707 11 + 16356641 TGACCCTGGAC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879009 11 + 22939663 TGACCATAGGA i otoGar3.GL873542 T 154 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3729790 0 - 3785965 C e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=23452.000000 s hg38.chr20_KI270870v1_alt 143541 4 + 183433 TGGC s panPan2.chr20 62147992 4 + 62195757 TGGC i panPan2.chr20 C 0 T 48 s rheMac8.chr10 92789902 4 - 92844088 TGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456536 4 + 96509753 TGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930135 4 - 16982598 TGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729790 4 - 3785965 TGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322774 4 - 90373283 TGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122585 4 - 179258 TGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598270 4 - 5823884 TGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79580 4 + 372756 TGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314718 4 + 16356641 TGGC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879020 4 + 22939663 AGGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e gorGor5.CYUI01015848v1 534022 213 - 578057 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=18822.000000 s hg38.chr20_KI270870v1_alt 143545 8 + 183433 TGTGGTGG s panPan2.chr20 62147948 8 + 62195757 TGTGGTGG i panPan2.chr20 T 48 C 0 s rheMac8.chr10 92789906 8 - 92844088 CGTGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456540 8 + 96509753 CGTGGTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930139 8 - 16982598 CGTGGTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729794 8 - 3785965 CGTGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322778 8 - 90373283 CGTGGTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122589 8 - 179258 CGTGGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598274 8 - 5823884 CATGGTGG i colAng1.NW_012114444v1 C 0 T 96 s calJac3.chrUn_GL286459 79584 8 + 372756 TCTGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314722 8 + 16356641 TCTGGTGT i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879024 1 + 22939663 -----T-- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e gorGor5.CYUI01015848v1 534022 213 - 578057 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=35926.000000 s hg38.chr20_KI270870v1_alt 143553 7 + 183433 GTGACCC s panPan2.chr20 62147956 7 + 62195757 GTGACCC i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92789914 7 - 92844088 GTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456548 7 + 96509753 GTGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930147 7 - 16982598 GTGACTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729802 7 - 3785965 GTGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322786 7 - 90373283 GTGACTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122597 7 - 179258 GTGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598186 7 - 5823884 GTGACCC i colAng1.NW_012114444v1 T 96 C 0 s calJac3.chrUn_GL286459 79592 7 + 372756 GTGACCC i calJac3.chrUn_GL286459 C 0 T 48 s saiBol1.JH378156 16314730 7 + 16356641 GTGACCC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879025 3 + 22939663 ----CTC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e gorGor5.CYUI01015848v1 534022 213 - 578057 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=-2195.000000 s hg38.chr20_KI270870v1_alt 143560 1 + 183433 -T s panPan2.chr20 62147963 1 + 62195757 -T i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92789921 1 - 92844088 -A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456555 1 + 96509753 -T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930154 1 - 16982598 -T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729809 1 - 3785965 -T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322793 1 - 90373283 -T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122604 1 - 179258 -T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598193 1 - 5823884 -T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79551 1 + 372756 -T i calJac3.chrUn_GL286459 T 48 C 0 s saiBol1.JH378156 16314737 1 + 16356641 -T i saiBol1.JH378156 C 0 T 93 s otoGar3.GL873542 22879028 1 + 22939663 A- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e gorGor5.CYUI01015848v1 534022 213 - 578057 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=19226.000000 s hg38.chr20_KI270870v1_alt 143561 7 + 183433 GGGATGG s panPan2.chr20 62147964 7 + 62195757 GGGCTGG i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92789922 7 - 92844088 GGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456556 7 + 96509753 GGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930155 7 - 16982598 GGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729810 7 - 3785965 GAGATGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322794 7 - 90373283 GGGTTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122605 7 - 179258 GGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598194 7 - 5823884 GGGATGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79552 7 + 372756 TGTCTGG i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879029 7 + 22939663 GGGTCAT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e gorGor5.CYUI01015848v1 534022 213 - 578057 T e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=17938.000000 s hg38.chr20_KI270870v1_alt 143568 6 + 183433 CTGTGG-- s panPan2.chr20 62147971 6 + 62195757 CCGTGG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533809 6 - 578057 CCATGG-- i gorGor5.CYUI01015848v1 T 213 C 0 s rheMac8.chr10 92789929 6 - 92844088 TCGTGG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456563 6 + 96509753 CCATGG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930162 6 - 16982598 CCGTGG-- i macNem1.NW_012014244v1 C 0 I 133 s cerAty1.NW_012001373v1 3729817 6 - 3785965 CTATGG-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322801 6 - 90373283 CCGTGG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122612 6 - 179258 CCGTGG-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598201 6 - 5823884 TCATGG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79559 6 + 372756 CTCTGG-- i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879036 6 + 22939663 --CTGGGT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=66697.000000 s hg38.chr20_KI270870v1_alt 143574 18 + 183433 TGGGTGACACTGGGCTGG s panPan2.chr20 62147977 18 + 62195757 TGGGTGACCCTGGGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533815 18 - 578057 TATGTGACCCGGGGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789935 18 - 92844088 TGGGTGACCCTGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456569 18 + 96509753 TGGATGACCCTGGGCTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3729823 18 - 3785965 TGGGTGACCCAGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322807 18 - 90373283 TGGGTGACCCTGGGCTGG i chlSab2.chr2 C 0 T 183 s manLeu1.NW_012101652v1 122618 18 - 179258 TATGTGACTCTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598207 18 - 5823884 TGGGTGACCCTGGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79565 18 + 372756 TAGGTGACCCTGGACTGG i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879042 18 + 22939663 AAGATGCAACTGGCCTAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e macNem1.NW_012014244v1 16930168 133 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=40187.000000 s hg38.chr20_KI270870v1_alt 143592 16 + 183433 CTGTGGTGGGTGACCC s panPan2.chr20 62147995 16 + 62195757 CCGTGGTGGGTGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533833 16 - 578057 CTGTGGTATGTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789953 16 - 92844088 CCGTGGTGGGTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456587 16 + 96509753 CCGTGGTGGGTGACCC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3729841 16 - 3785965 TCGTGGTGGGTGACCC i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 122636 16 - 179258 CCGTGGTGGGTGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598225 16 - 5823884 CCGTGGTGGGTGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79583 16 + 372756 CTCTGGTGTGTGACCC i calJac3.chrUn_GL286459 C 0 T 121 s otoGar3.GL873542 22879060 1 + 22939663 ----------T----- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90322825 183 - 90373283 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e macNem1.NW_012014244v1 16930168 133 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=21571.000000 s hg38.chr20_KI270870v1_alt 143608 9 + 183433 TGGGATGGT s panPan2.chr20 62148011 9 + 62195757 TGGGATGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533849 9 - 578057 TGGGACGGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789969 9 - 92844088 TGGGCTGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456603 9 + 96509753 TGGGATGCT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3729857 9 - 3785965 TGGGCTGGT i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 122652 9 - 179258 TGGGCTGGT i manLeu1.NW_012101652v1 C 0 T 88 s colAng1.NW_012114444v1 5598241 9 - 5823884 TGGGCTGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79478 9 + 372756 TGGACTGGT i calJac3.chrUn_GL286459 T 121 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90322825 183 - 90373283 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e macNem1.NW_012014244v1 16930168 133 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879061 0 + 22939663 C a score=2552.000000 s hg38.chr20_KI270870v1_alt 143617 1 + 183433 C s panPan2.chr20 62148020 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533858 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92789978 1 - 92844088 C i rheMac8.chr10 C 0 I 1248 s macFas5.chr10 96456612 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930301 1 - 16982598 C i macNem1.NW_012014244v1 I 133 C 0 s cerAty1.NW_012001373v1 3729866 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5598250 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79487 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90322825 183 - 90373283 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122661 88 - 179258 T e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T e otoGar3.GL873542 22879061 0 + 22939663 C a score=61715.000000 s hg38.chr20_KI270870v1_alt 143618 22 + 183433 ATGGTGGGTGACCCTGGGCTGG s panPan2.chr20 62148021 22 + 62195757 ATGGTGGGTGACCCTGGGCTGG i panPan2.chr20 C 0 T 69 s gorGor5.CYUI01015848v1 533859 22 - 578057 ATGGTGTGTGACCCGGGGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791227 22 - 92844088 GTGGTGGGTGACCCTGGGATGG i rheMac8.chr10 I 1248 C 0 s macFas5.chr10 96456613 22 + 96509753 ATGGTGGATGACCCTGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930302 22 - 16982598 GTGGTGGGTGACCCTGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729867 22 - 3785965 TTTGTGGGTGACCCTGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5598251 22 - 5823884 GTGGTAGGTGACCCTGGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79488 22 + 372756 ATGGTGTGTGACCCTGGGCTGG i calJac3.chrUn_GL286459 C 0 I 1 s otoGar3.GL873542 22879061 5 + 22939663 -----------------ACTGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90322825 183 - 90373283 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122661 88 - 179258 T e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=3217.000000 s hg38.chr20_KI270870v1_alt 143640 3 + 183433 -CCA s gorGor5.CYUI01015848v1 533881 3 - 578057 -CCA i gorGor5.CYUI01015848v1 C 0 I 264 s rheMac8.chr10 92791249 3 - 92844088 -CTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456635 3 + 96509753 -CCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930324 3 - 16982598 -CCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729889 3 - 3785965 -CCA i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5598273 3 - 5823884 -CCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79511 2 + 372756 -CC- i calJac3.chrUn_GL286459 I 1 C 0 s otoGar3.GL873542 22879066 4 + 22939663 CCCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90322825 183 - 90373283 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 69 + 62195757 T e manLeu1.NW_012101652v1 122661 88 - 179258 T e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=8579.000000 s hg38.chr20_KI270870v1_alt 143643 6 + 183433 TGGTGG--- s gorGor5.CYUI01015848v1 534148 6 - 578057 CGGTGG--- i gorGor5.CYUI01015848v1 I 264 C 0 s rheMac8.chr10 92791252 6 - 92844088 TGGTGG--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456638 6 + 96509753 TGGTGG--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930327 6 - 16982598 TGGTGG--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729892 6 - 3785965 TGGTGG--- i cerAty1.NW_012001373v1 C 0 I 24 s colAng1.NW_012114444v1 5598276 6 - 5823884 TGGTGG--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79513 3 + 372756 ---TGG--- i calJac3.chrUn_GL286459 C 0 I 3 s otoGar3.GL873542 22879070 6 + 22939663 ---TAAAGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90322825 183 - 90373283 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 69 + 62195757 T e manLeu1.NW_012101652v1 122661 88 - 179258 T e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=51912.000000 s hg38.chr20_KI270870v1_alt 143649 18 + 183433 TTGATGCTGGG-ATGGTCA s gorGor5.CYUI01015848v1 534154 18 - 578057 GTGACCCTGGG-ATGGTTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791258 18 - 92844088 GTGACCCAGGG-CTGGTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456644 18 + 96509753 GTGACCCTGGG-CTGGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930333 18 - 16982598 GTGACCCTGGG-CTGGCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729922 18 - 3785965 ATGACCCTGGG-CTGGTCA i cerAty1.NW_012001373v1 I 24 C 0 s chlSab2.chr2 90322642 18 - 90373283 ATGACTCGGGG-CTGGCGG i chlSab2.chr2 T 183 C 0 s manLeu1.NW_012101652v1 122573 18 - 179258 GTGACTCTGGG-CTGGCCG i manLeu1.NW_012101652v1 T 88 C 0 s colAng1.NW_012114444v1 5598282 18 - 5823884 GTGATGCTGGA-CTGGCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79519 19 + 372756 GTGACCCTGGGATTGATCA i calJac3.chrUn_GL286459 I 3 C 0 s otoGar3.GL873542 22879076 18 + 22939663 ATGACATTGGA-CTGATCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 69 + 62195757 T e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=67552.000000 s hg38.chr20_KI270870v1_alt 143667 12 + 183433 TGGTGGGTGACC s panPan2.chr20 62147974 12 + 62195757 TGGTGGGTGACC i panPan2.chr20 T 69 C 0 s gorGor5.CYUI01015848v1 534172 12 - 578057 TGGTGGGTGACC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791276 12 - 92844088 TGGTGGGTGACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456662 12 + 96509753 TGGTGGGTGACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930351 12 - 16982598 TGGTGGGTGACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729940 12 - 3785965 TGGTGGGTGACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322660 12 - 90373283 TGGTGGATGACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122591 12 - 179258 TGGTGGGTGACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598300 12 - 5823884 TGGTGGGTGACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79538 12 + 372756 TGGTGTGTGACC i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879094 12 + 22939663 TGGTTTATGACC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478142 814 + 66533130 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=29064.000000 s hg38.chr20_KI270870v1_alt 143679 6 + 183433 CTGGGA s panTro5.chr20 66478956 6 + 66533130 CTGGGA i panTro5.chr20 I 814 C 0 s panPan2.chr20 62147986 6 + 62195757 CTGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534184 6 - 578057 CTGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791288 6 - 92844088 CAGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456674 6 + 96509753 CTGGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930363 6 - 16982598 CTGGGC i macNem1.NW_012014244v1 C 0 T 378 s cerAty1.NW_012001373v1 3729952 6 - 3785965 CTGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322672 6 - 90373283 CTGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122603 6 - 179258 CTGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598312 6 - 5823884 CTGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79550 6 + 372756 CTTGTC i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879106 6 + 22939663 TTGGGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=18426.000000 s hg38.chr20_KI270870v1_alt 143685 3 + 183433 TGG s panTro5.chr20 66478962 3 + 66533130 TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147992 3 + 62195757 TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534190 3 - 578057 TGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791294 3 - 92844088 TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456680 3 + 96509753 TGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929991 3 - 16982598 TGG i macNem1.NW_012014244v1 T 378 C 0 s cerAty1.NW_012001373v1 3729958 3 - 3785965 TGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322678 3 - 90373283 TGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122609 3 - 179258 TGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598318 3 - 5823884 TGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79556 3 + 372756 TGG i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879112 3 + 22939663 TAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 48 - 110113093 T a score=12147.000000 s hg38.chr20_KI270870v1_alt 143688 2 + 183433 CC s panTro5.chr20 66478965 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147995 2 + 62195757 CC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534193 2 - 578057 TC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055870 2 - 110113093 CC i nomLeu3.chr13 T 48 C 0 s rheMac8.chr10 92791297 2 - 92844088 TC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456683 2 + 96509753 TC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929994 2 - 16982598 CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729961 2 - 3785965 CC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322681 2 - 90373283 CC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122612 2 - 179258 CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598321 2 - 5823884 CC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79559 2 + 372756 CT i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879115 2 + 22939663 CC i otoGar3.GL873542 C 0 T 124 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I a score=81227.000000 s hg38.chr20_KI270870v1_alt 143690 15 + 183433 GTGGTGGG--------TGACCCT s panTro5.chr20 66478967 15 + 66533130 GCGGTGGG--------TGACCCT i panTro5.chr20 C 0 I 111 s panPan2.chr20 62147997 15 + 62195757 GTGGTGGG--------TGACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534195 15 - 578057 GTGGTGGG--------TGACCCG i gorGor5.CYUI01015848v1 C 0 I 24 s nomLeu3.chr13 110055872 15 - 110113093 ATAATGTG--------TGACCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92791299 15 - 92844088 ATGGTGGG--------TGACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456685 15 + 96509753 ATGGTGGA--------TGACCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929996 15 - 16982598 GTGGTGGG--------TGACCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729963 15 - 3785965 CTGGTGGG--------TGACCCT i cerAty1.NW_012001373v1 C 0 I 293 s chlSab2.chr2 90322683 15 - 90373283 ATAGTATA--------TGACCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122614 15 - 179258 GTGGTATG--------TGACTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598323 15 - 5823884 GTAGTATG--------TGACCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79561 15 + 372756 CTGGTAGG--------TGACCCT i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22878993 23 + 22939663 GTGATGGGAATCAATTTGACCAT i otoGar3.GL873542 T 124 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I a score=100492.000000 s hg38.chr20_KI270870v1_alt 143705 23 + 183433 GGGATGGTCATGATGGGTGACCC s panPan2.chr20 62148012 23 + 62195757 GGGATGGTCATGGTGGGTGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534234 23 - 578057 GGGATGGTCGTGGTGGGTGACCC i gorGor5.CYUI01015848v1 I 24 C 0 s nomLeu3.chr13 110055887 23 - 110113093 GGGCTGGTCATGGTGGGTGACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92791314 23 - 92844088 GGGCTGGTCTTTGTGGGTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456700 23 + 96509753 GGGCTGGACGTGGTATGTGACTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930011 23 - 16982598 GGGCTGGCTGTGGTGGGTGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730271 23 - 3785965 GGGATGTTCATGGTATGTGACCC i cerAty1.NW_012001373v1 I 293 C 0 s chlSab2.chr2 90322698 23 - 90373283 GGGCTGGTCATGGTGGGTGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122629 23 - 179258 GGGCTGGCCGTGGTGGGTGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598338 23 - 5823884 GGGATGGTCATGGTGAGTGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79576 23 + 372756 GGACTGGCTCTGGTGTGTGACCC i calJac3.chrUn_GL286459 C 0 T 131 s otoGar3.GL873542 22879016 21 + 22939663 AGGAAGGCTCTCA-GGGTCATC- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I a score=45188.000000 s hg38.chr20_KI270870v1_alt 143728 8 + 183433 TGGGCTGG s panPan2.chr20 62148035 8 + 62195757 TGGGCTGG i panPan2.chr20 C 0 T 87 s gorGor5.CYUI01015848v1 534257 8 - 578057 TGGGCTGG i gorGor5.CYUI01015848v1 C 0 T 354 s nomLeu3.chr13 110055910 8 - 110113093 TGGGCTGG i nomLeu3.chr13 C 0 T 47 s rheMac8.chr10 92791337 8 - 92844088 TGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456723 8 + 96509753 TGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930034 8 - 16982598 TGGGTTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730294 8 - 3785965 TGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322721 8 - 90373283 TGGGCTGG i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 122652 8 - 179258 TGGGCTGG i manLeu1.NW_012101652v1 C 0 T 231 s colAng1.NW_012114444v1 5598361 8 - 5823884 TGGGCTGG i colAng1.NW_012114444v1 C 0 T 159 s otoGar3.GL873542 22879037 8 + 22939663 TGGGTAAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 131 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I a score=-1260.000000 s hg38.chr20_KI270870v1_alt 143736 1 + 183433 -C s rheMac8.chr10 92791345 1 - 92844088 -C i rheMac8.chr10 C 0 I 5 s macFas5.chr10 96456731 1 + 96509753 -C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930042 1 - 16982598 -C i macNem1.NW_012014244v1 C 0 I 125 s cerAty1.NW_012001373v1 3730302 1 - 3785965 -C i cerAty1.NW_012001373v1 C 0 I 5 s chlSab2.chr2 90322730 1 - 90373283 -C i chlSab2.chr2 I 1 I 26 s otoGar3.GL873542 22879045 1 + 22939663 A- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598369 159 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 87 + 62195757 T e gorGor5.CYUI01015848v1 534265 354 - 578057 T e manLeu1.NW_012101652v1 122660 231 - 179258 T e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 131 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=5348.000000 s hg38.chr20_KI270870v1_alt 143737 2 + 183433 TG s gorGor5.CYUI01015848v1 533911 2 - 578057 TG i gorGor5.CYUI01015848v1 T 354 C 0 s rheMac8.chr10 92791351 2 - 92844088 TG i rheMac8.chr10 I 5 C 0 s macFas5.chr10 96456732 2 + 96509753 TG i macFas5.chr10 C 0 I 149 s cerAty1.NW_012001373v1 3730308 2 - 3785965 TG i cerAty1.NW_012001373v1 I 5 C 0 s chlSab2.chr2 90322757 2 - 90373283 TG i chlSab2.chr2 I 26 I 2 s calJac3.chrUn_GL286459 79468 2 + 372756 TG i calJac3.chrUn_GL286459 T 131 I 1 s otoGar3.GL873542 22879046 2 + 22939663 TG i otoGar3.GL873542 C 0 I 2 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598369 159 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 87 + 62195757 T e manLeu1.NW_012101652v1 122660 231 - 179258 T e saiBol1.JH378156 16314738 93 + 16356641 T e macNem1.NW_012014244v1 16930043 125 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=-259.000000 s hg38.chr20_KI270870v1_alt 143739 1 + 183433 A s gorGor5.CYUI01015848v1 533913 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791353 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456883 1 + 96509753 T i macFas5.chr10 I 149 C 0 s cerAty1.NW_012001373v1 3730310 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322761 1 - 90373283 G i chlSab2.chr2 I 2 T 14965 s otoGar3.GL873542 22879050 1 + 22939663 A i otoGar3.GL873542 I 2 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598369 159 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 87 + 62195757 T e manLeu1.NW_012101652v1 122660 231 - 179258 T e saiBol1.JH378156 16314738 93 + 16356641 T e macNem1.NW_012014244v1 16930043 125 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79470 1 + 372756 I e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=40290.000000 s hg38.chr20_KI270870v1_alt 143740 12 + 183433 GTGACCCTGGGC s panPan2.chr20 62147956 12 + 62195757 GTGACCCTGGGC i panPan2.chr20 T 87 C 0 s gorGor5.CYUI01015848v1 533914 12 - 578057 GTGACCCTGAGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791354 12 - 92844088 GTGACCCTGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456884 12 + 96509753 GTGACTCTGGGC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730311 12 - 3785965 GTGACCCTGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307797 12 - 90373283 GTGACCCTGGGC i chlSab2.chr2 T 14965 C 0 s colAng1.NW_012114444v1 5598210 12 - 5823884 GTGACCCTGGGC i colAng1.NW_012114444v1 T 159 C 0 s calJac3.chrUn_GL286459 79471 12 + 372756 GTGACCCTGGAC i calJac3.chrUn_GL286459 I 1 C 0 s otoGar3.GL873542 22879051 12 + 22939663 CTGGCCTAGTAC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122660 231 - 179258 T e saiBol1.JH378156 16314738 93 + 16356641 T e macNem1.NW_012014244v1 16930043 125 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=38232.000000 s hg38.chr20_KI270870v1_alt 143752 12 + 183433 TGGCCGTGGTAT s panPan2.chr20 62147968 12 + 62195757 TGGCCGTGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533926 12 - 578057 TGGCCATGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791366 12 - 92844088 TGGCTGTGGTAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456896 12 + 96509753 TGGCCGTGGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930168 12 - 16982598 TGGCCGTGGTAT i macNem1.NW_012014244v1 I 125 C 0 s cerAty1.NW_012001373v1 3730323 12 - 3785965 TGGCCGTGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307809 12 - 90373283 TGGCCGTGGTAT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598222 12 - 5823884 TGGCCGTGGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79483 12 + 372756 TGGTCATGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879063 5 + 22939663 TGGCC------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122660 231 - 179258 T e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=58214.000000 s hg38.chr20_KI270870v1_alt 143764 12 + 183433 GTGACCCGGGGC s panPan2.chr20 62147980 12 + 62195757 GTGACCCTGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533938 12 - 578057 GTGACCCGGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791378 12 - 92844088 GTGACCCTGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456908 12 + 96509753 GTGACCCTGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930180 12 - 16982598 GTGACCCTGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730335 12 - 3785965 GTGACCCTGAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307821 12 - 90373283 GTGACTCTGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122429 12 - 179258 GTGACCCTGGGC i manLeu1.NW_012101652v1 T 231 C 0 s colAng1.NW_012114444v1 5598234 12 - 5823884 GTGACCCTGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79495 12 + 372756 GTGACCCTGGGC i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 93 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879068 0 + 22939663 C a score=52943.000000 s hg38.chr20_KI270870v1_alt 143776 12 + 183433 TGGCCGTGGTAT s panPan2.chr20 62147992 12 + 62195757 TGGCCGTGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533950 12 - 578057 TGGCCATGGTAT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791390 12 - 92844088 TGGCCGTGGTAT i rheMac8.chr10 C 0 I 94 s macFas5.chr10 96456920 12 + 96509753 TGGCCATAGTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930192 12 - 16982598 TGGCCGTGGTAT i macNem1.NW_012014244v1 C 0 I 161 s cerAty1.NW_012001373v1 3730347 12 - 3785965 TGGCCGTGATAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307833 12 - 90373283 TGGCCGTGGTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122441 12 - 179258 TGGCCGTGGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598246 12 - 5823884 TGGCTGTGGTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79507 12 + 372756 TGGCCCTGGCAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314645 12 + 16356641 TAACCATAGTAT i saiBol1.JH378156 T 93 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879068 0 + 22939663 C a score=48253.000000 s hg38.chr20_KI270870v1_alt 143788 12 + 183433 GTGACCCCGGGA s panPan2.chr20 62148004 12 + 62195757 GTGACCCTGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533962 12 - 578057 GTGACCCTGGAA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791496 12 - 92844088 GTGACCCAGGGC i rheMac8.chr10 I 94 C 0 s macFas5.chr10 96456932 12 + 96509753 ATGACCCTGGGC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730359 12 - 3785965 GTGACTCTGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307845 12 - 90373283 GTGACTCTGGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122453 12 - 179258 GTGACCCTGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598258 12 - 5823884 GTGACCCTGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79519 12 + 372756 GTGACCCTGGGA i calJac3.chrUn_GL286459 C 0 T 48 s saiBol1.JH378156 16314657 12 + 16356641 GTGACCCCGGGA i saiBol1.JH378156 C 0 I 1 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e macNem1.NW_012014244v1 16930204 161 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879068 0 + 22939663 C a score=19143.000000 s hg38.chr20_KI270870v1_alt 143800 5 + 183433 TGGTC s panPan2.chr20 62148016 5 + 62195757 TGGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533974 5 - 578057 TGGTC i gorGor5.CYUI01015848v1 C 0 T 41 s rheMac8.chr10 92791508 5 - 92844088 TGGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456944 5 + 96509753 TGGTC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730371 5 - 3785965 TGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307857 5 - 90373283 TGGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122465 5 - 179258 TGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598270 5 - 5823884 TGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79483 5 + 372756 TGGTC i calJac3.chrUn_GL286459 T 48 C 0 s saiBol1.JH378156 16314670 5 + 16356641 TGATG i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22879068 1 + 22939663 ----C i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e macNem1.NW_012014244v1 16930204 161 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=22404.000000 s hg38.chr20_KI270870v1_alt 143805 7 + 183433 ATGGTGT s panPan2.chr20 62148021 7 + 62195757 ATGGTGG i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92791513 7 - 92844088 GTGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456949 7 + 96509753 ATGGTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730376 7 - 3785965 GTGGTGG i cerAty1.NW_012001373v1 C 0 T 485 s chlSab2.chr2 90307862 7 - 90373283 GTGGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122470 7 - 179258 GTGGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598275 7 - 5823884 ATGGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79488 7 + 372756 ATGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314675 7 + 16356641 ATGGTGT i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879069 7 + 22939663 ATAAAGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e gorGor5.CYUI01015848v1 533979 41 - 578057 T e macNem1.NW_012014244v1 16930204 161 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=36895.000000 s hg38.chr20_KI270870v1_alt 143812 8 + 183433 GTGACCCG s panPan2.chr20 62148028 8 + 62195757 GTGACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533938 8 - 578057 GTGACCCG i gorGor5.CYUI01015848v1 T 41 C 0 s rheMac8.chr10 92791520 8 - 92844088 GTGACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456956 8 + 96509753 GTGACCCT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3729898 8 - 3785965 ATGACCCT i cerAty1.NW_012001373v1 T 485 C 0 s chlSab2.chr2 90307869 8 - 90373283 GTGACCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122477 8 - 179258 GTGACCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598282 8 - 5823884 GTGATGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79495 8 + 372756 GTGACCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314682 8 + 16356641 GTGACCCT i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879076 8 + 22939663 ATGACATT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e macNem1.NW_012014244v1 16930204 161 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=23285.000000 s hg38.chr20_KI270870v1_alt 143820 4 + 183433 GGGC s panPan2.chr20 62148036 4 + 62195757 GGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533946 4 - 578057 GGGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791528 4 - 92844088 GGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456964 4 + 96509753 GGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930365 4 - 16982598 GGGC i macNem1.NW_012014244v1 I 161 C 0 s cerAty1.NW_012001373v1 3729906 4 - 3785965 GGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307877 4 - 90373283 GGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122485 4 - 179258 GGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598290 4 - 5823884 GGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79503 4 + 372756 GGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314690 4 + 16356641 CGTC i saiBol1.JH378156 C 0 T 49 s otoGar3.GL873542 22879084 4 + 22939663 GGAC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=18235.000000 s hg38.chr20_KI270870v1_alt 143824 3 + 183433 TGG s panPan2.chr20 62148040 3 + 62195757 TGG i panPan2.chr20 C 0 T 93 s gorGor5.CYUI01015848v1 533950 3 - 578057 TGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791532 3 - 92844088 TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456968 3 + 96509753 TGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930369 3 - 16982598 TGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729910 3 - 3785965 TGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307881 3 - 90373283 TGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122489 3 - 179258 TGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598294 3 - 5823884 TGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79507 3 + 372756 TGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314645 3 + 16356641 TAA i saiBol1.JH378156 T 49 C 0 s otoGar3.GL873542 22879088 3 + 22939663 TGA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=8311.000000 s hg38.chr20_KI270870v1_alt 143827 3 + 183433 CCG s gorGor5.CYUI01015848v1 533953 3 - 578057 CCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791535 3 - 92844088 CCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456971 3 + 96509753 CCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930372 3 - 16982598 CCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729913 3 - 3785965 CCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307884 3 - 90373283 TCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122492 3 - 179258 CCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598297 3 - 5823884 CCG i colAng1.NW_012114444v1 C 0 T 120 s calJac3.chrUn_GL286459 79510 3 + 372756 CCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314648 3 + 16356641 CCA i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879091 3 + 22939663 TCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=70023.000000 s hg38.chr20_KI270870v1_alt 143830 22 + 183433 TGGTATGTGACCCCGGGATGGT s gorGor5.CYUI01015848v1 533956 22 - 578057 TGGTATGTGACCCTGGAATGGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791538 22 - 92844088 TGGTGGGTGACCCTGGGCTGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456974 22 + 96509753 TGGTGGGTGACCCTGGGCTGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930375 22 - 16982598 TGGTATGTGACTCTGGGCTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729916 22 - 3785965 TAGTATATGACCCTGGGCTGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307887 22 - 90373283 TTGCGAGTGACCCCAGGATGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122495 22 - 179258 TGGTATGTGACCCTGGGCTGGC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 79513 22 + 372756 TGGCATGTGACCCTGGGATTGA i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16314651 22 + 16356641 TAGTATGTGACCCCGGGATTGA i saiBol1.JH378156 C 0 I 1 s otoGar3.GL873542 22879094 22 + 22939663 TGGTTTATGACCTTGGGCTAGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598300 120 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=7700.000000 s hg38.chr20_KI270870v1_alt 143852 2 + 183433 CA s gorGor5.CYUI01015848v1 533978 2 - 578057 CA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055871 2 - 110113093 CA i nomLeu3.chr13 T 47 C 0 s rheMac8.chr10 92791560 2 - 92844088 CG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456996 2 + 96509753 CA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930397 2 - 16982598 CA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729938 2 - 3785965 CA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307909 2 - 90373283 CA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122517 2 - 179258 CG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 79536 2 + 372756 CA i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16314674 2 + 16356641 GA i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22879116 2 + 22939663 CA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598300 120 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I a score=107502.000000 s hg38.chr20_KI270870v1_alt 143854 21 + 183433 TGGTGTGTGACCCGGGGCTGG s gorGor5.CYUI01015848v1 533980 21 - 578057 TGGTGGGTGACCCTGGGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055873 21 - 110113093 TAATGTGTGACCCTGGGCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92791562 21 - 92844088 TGGTATGTGACTCTGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96456998 21 + 96509753 TAGTATATGACCCTGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930399 21 - 16982598 TGGTGGGTGACCCTGGGCTGG i macNem1.NW_012014244v1 C 0 T 330 s cerAty1.NW_012001373v1 3729940 21 - 3785965 TGGTGGGTGACCCTGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307911 21 - 90373283 TGGTGGATGACTCGGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122519 21 - 179258 TGGTGGGTGACCCTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598180 21 - 5823884 TGGTATGTGACCCTGGGATGT i colAng1.NW_012114444v1 T 120 C 0 s calJac3.chrUn_GL286459 79538 21 + 372756 TGGTGTGTGACCCTTGTCTGG i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16314676 21 + 16356641 TGGTGTGTGACCCTCGTCTGG i saiBol1.JH378156 C 0 I 1 s otoGar3.GL873542 22879118 21 + 22939663 TGCTGTCTGACCCTGCCCTGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I a score=-1234.000000 s hg38.chr20_KI270870v1_alt 143875 3 + 183433 CCA s gorGor5.CYUI01015848v1 534001 3 - 578057 CCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055894 3 - 110113093 TCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92791583 3 - 92844088 CCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457019 3 + 96509753 CCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930090 3 - 16982598 CCG i macNem1.NW_012014244v1 T 330 C 0 s cerAty1.NW_012001373v1 3729961 3 - 3785965 CCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307932 3 - 90373283 CGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122540 3 - 179258 CCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598201 3 - 5823884 TCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79560 2 + 372756 TC- i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16314698 2 + 16356641 CC- i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22879139 3 + 22939663 TCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I a score=152504.000000 s hg38.chr20_KI270870v1_alt 143878 21 + 183433 TGGTGGGTGACCCCGAGCTGG s panPan2.chr20 62147950 21 + 62195757 TGGTGGGTGACCCTGGGCTGG i panPan2.chr20 T 93 C 0 s gorGor5.CYUI01015848v1 534004 21 - 578057 CGGTGGGTGACCCTGGGATGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055897 21 - 110113093 TGGTGGGTGACCCTGGGCTGG i nomLeu3.chr13 C 0 T 47 s rheMac8.chr10 92791586 21 - 92844088 TGGTGGGTGACCCAGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457022 21 + 96509753 TGGTGGGTGACCCTGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930093 21 - 16982598 TGGTGGGTGACCCTGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729964 21 - 3785965 TGGTGGGTGACCCTGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307935 21 - 90373283 TGGTGGATGACCCTGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122543 21 - 179258 TGGTGGGTGACCCTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598204 21 - 5823884 TGGTGGGTGACCCTGGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79562 21 + 372756 TGGTAGGTGACCCTGGACTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314700 21 + 16356641 TGGTAGGTGACCCTGGACTGG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879142 21 + 22939663 CAGTGTGGGACCCTGTCTTGG i otoGar3.GL873542 C 0 T 86 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I a score=30234.000000 s hg38.chr20_KI270870v1_alt 143899 7 + 183433 CTGTGGT s panPan2.chr20 62147971 7 + 62195757 CCGTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534025 7 - 578057 CCGCGGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791607 7 - 92844088 CCGTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457043 7 + 96509753 CTGTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930114 7 - 16982598 CCGTGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729985 7 - 3785965 CCATAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307956 7 - 90373283 CCATAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122564 7 - 179258 CCGTGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598225 7 - 5823884 CCGTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79583 7 + 372756 CTCTGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314721 7 + 16356641 CTCTGGT i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66478982 111 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879163 86 + 22939663 T a score=1707.000000 s hg38.chr20_KI270870v1_alt 143906 2 + 183433 GG s panTro5.chr20 66479093 2 + 66533130 GG i panTro5.chr20 I 111 C 0 s panPan2.chr20 62147978 2 + 62195757 GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534032 2 - 578057 GG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791614 2 - 92844088 GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457050 2 + 96509753 AT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930121 2 - 16982598 GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729992 2 - 3785965 AT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307963 2 - 90373283 AT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122571 2 - 179258 AT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598232 2 - 5823884 GG i colAng1.NW_012114444v1 C 0 T 48 s calJac3.chrUn_GL286459 79590 2 + 372756 GT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314728 2 + 16356641 GT i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879163 86 + 22939663 T a score=48733.000000 s hg38.chr20_KI270870v1_alt 143908 7 + 183433 GTGACCC s panTro5.chr20 66479095 7 + 66533130 GTGACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147980 7 + 62195757 GTGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534034 7 - 578057 GTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791616 7 - 92844088 GTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457052 7 + 96509753 GTGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930123 7 - 16982598 GTGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3729994 7 - 3785965 ATGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307965 7 - 90373283 ATGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122573 7 - 179258 GTGACTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598186 7 - 5823884 GTGACCC i colAng1.NW_012114444v1 T 48 C 0 s calJac3.chrUn_GL286459 79592 7 + 372756 GTGACCC i calJac3.chrUn_GL286459 C 0 T 97 s saiBol1.JH378156 16314730 7 + 16356641 GTGACCC i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879163 86 + 22939663 T a score=46437.000000 s hg38.chr20_KI270870v1_alt 143915 8 + 183433 TGGGCTGG s panTro5.chr20 66479102 8 + 66533130 TGAGCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147987 8 + 62195757 TGGGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534041 8 - 578057 TGGGATGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791623 8 - 92844088 TGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457059 8 + 96509753 TGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930130 8 - 16982598 TGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730001 8 - 3785965 TGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307972 8 - 90373283 TGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122580 8 - 179258 TGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598193 8 - 5823884 TGGGATGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79502 8 + 372756 TGGGCTGG i calJac3.chrUn_GL286459 T 97 C 0 s saiBol1.JH378156 16314737 8 + 16356641 TACACTGG i saiBol1.JH378156 C 0 T 97 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879163 86 + 22939663 T a score=82991.000000 s hg38.chr20_KI270870v1_alt 143923 16 + 183433 CCGTGGTGGGTGACCC s panTro5.chr20 66479110 16 + 66533130 CCGTGGTGGGTGACCC i panTro5.chr20 C 0 I 62 s panPan2.chr20 62147995 16 + 62195757 CCGTGGTGGGTGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534049 16 - 578057 CCGCGGTGGGTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791631 16 - 92844088 CCCTGGTGGGTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457067 16 + 96509753 CCGTGGTGGGTGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930138 16 - 16982598 CCGTGGTATGTGACTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730009 16 - 3785965 CCGTGGTGGGTGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307980 16 - 90373283 TCATGGTGGGTGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122588 16 - 179258 CCGTGGTGGGTGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598201 16 - 5823884 TCATGGTGGGTGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79510 16 + 372756 CCCTGGCATGTGACCC i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879163 86 + 22939663 T a score=38759.000000 s hg38.chr20_KI270870v1_alt 143939 11 + 183433 TGGGATGGCCG s panPan2.chr20 62148011 11 + 62195757 TGGGATGGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534065 11 - 578057 TGGGCTGGCCG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791647 11 - 92844088 TGGGCTGGCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457083 11 + 96509753 TGGGCTGGCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930154 11 - 16982598 TGGGCTGGCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730025 11 - 3785965 TGGGCTGGCCG i cerAty1.NW_012001373v1 C 0 I 24 s chlSab2.chr2 90307996 11 - 90373283 TGGGCTGGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122604 11 - 179258 TGGGCTGGCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598217 11 - 5823884 TGGGCTGGCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79526 6 + 372756 TGGGAT----- i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879163 86 + 22939663 T a score=12314.000000 s hg38.chr20_KI270870v1_alt 143950 7 + 183433 TTGTGG---------G s panPan2.chr20 62148022 7 + 62195757 TGGTGG---------G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534076 7 - 578057 CGGTGG---------G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791658 7 - 92844088 TGGTAT---------G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457094 7 + 96509753 TGGTGG---------G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930165 16 - 16982598 TGGTGGCCGTGGTATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730060 7 - 3785965 TGGTGG---------A i cerAty1.NW_012001373v1 I 24 C 0 s chlSab2.chr2 90308007 7 - 90373283 TTGCGG---------G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122615 7 - 179258 TGGTAT---------G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598228 7 - 5823884 TGGTGG---------G i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79532 0 + 372756 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879163 86 + 22939663 T a score=58377.000000 s hg38.chr20_KI270870v1_alt 143957 15 + 183433 TGACACTGGGCTGGT s panPan2.chr20 62148029 15 + 62195757 TGACCCTGGGCTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534083 15 - 578057 TGACCCTGGGATGGC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791665 15 - 92844088 TGACTCTGGGCTGGC i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96457101 15 + 96509753 TGACCCTGGGCTGGC i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16930181 15 - 16982598 TGACCCTGGGCTGGC i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3730067 15 - 3785965 TGACCCTGGGCTGGC i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90308014 15 - 90373283 TGGCCCTGGGCTGGT i chlSab2.chr2 C 0 T 167 s manLeu1.NW_012101652v1 122622 15 - 179258 TGACTCTGGGCTGGC i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5598235 15 - 5823884 TGACCCTGGGCTGGC i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chrUn_GL286459 79532 4 + 372756 TGAT----------- i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879077 15 + 22939663 TGACATTGGACTGAT i otoGar3.GL873542 T 86 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=-350.000000 s hg38.chr20_KI270870v1_alt 143972 1 + 183433 G s panPan2.chr20 62148044 1 + 62195757 G i panPan2.chr20 C 0 T 50 s gorGor5.CYUI01015848v1 534098 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chrUn_GL286459 79536 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879092 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730082 1 - 3785965 I e colAng1.NW_012114444v1 5598250 1 - 5823884 I e chlSab2.chr2 90308029 167 - 90373283 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122637 1 - 179258 I e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930196 1 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T e rheMac8.chr10 92791680 1 - 92844088 I e macFas5.chr10 96457116 1 + 96509753 I a score=91381.000000 s hg38.chr20_KI270870v1_alt 143973 22 + 183433 GTGGTGGGTGACCCTTGGCTGG s gorGor5.CYUI01015848v1 534099 22 - 578057 GCGGTGGGTGACCCTGGGATGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791681 22 - 92844088 GTGGTGGGTGACCCTGGGCTGG i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96457117 22 + 96509753 GTGGTATGTGACCCTGGGCTGG i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16930197 22 - 16982598 GTGGTATGTGACCCTGGGCTGG i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3730083 22 - 3785965 GTGGTGGGTGACCCTGGGCTGG i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90307862 22 - 90373283 GTGGTGGGTGACCCTGGGCTGG i chlSab2.chr2 T 167 C 0 s manLeu1.NW_012101652v1 122638 22 - 179258 GTGGTGGGTGACCCTGGGCTGG i manLeu1.NW_012101652v1 I 1 T 96 s colAng1.NW_012114444v1 5598251 22 - 5823884 GTGGTAGGTGACCCTGGGCTGG i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chrUn_GL286459 79537 22 + 372756 ATGGTGTGTGACCCTTGTCTGG i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879093 22 + 22939663 ATGGTTTATGACCTTGGGCTAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148045 50 + 62195757 T e saiBol1.JH378156 16314745 97 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=66508.000000 s hg38.chr20_KI270870v1_alt 143995 17 + 183433 CCATGGTGGGTGATGCT s panPan2.chr20 62147995 17 + 62195757 CCGTGGTGGGTGACCCT i panPan2.chr20 T 50 C 0 s gorGor5.CYUI01015848v1 534121 17 - 578057 TCGCGGTGGGTGACCCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791703 17 - 92844088 CCGTGGTGGGTGACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457139 17 + 96509753 CCGTGGTGGGTGACCCT i macFas5.chr10 C 0 I 109 s macNem1.NW_012014244v1 16930219 17 - 16982598 CCGTGGTGGATGACCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730105 17 - 3785965 CCGTGGTATGTGACCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307884 17 - 90373283 TCTTTGCGAGTGACCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122564 17 - 179258 CCGTGGTATGTGACTCT i manLeu1.NW_012101652v1 T 96 C 0 s colAng1.NW_012114444v1 5598273 17 - 5823884 CCATGGTGGGTGATGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79559 17 + 372756 CTCTGGTAGGTGACCCT i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879115 17 + 22939663 CCATGCTGTCTGACCCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=80213.000000 s hg38.chr20_KI270870v1_alt 144012 20 + 183433 GGGATGGTCATGGTGGGTGA s panPan2.chr20 62148012 20 + 62195757 GGGATGGTCATGGTGGGTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534138 20 - 578057 GGGATGGCCGCGGTGGGTGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791720 20 - 92844088 GGGCTGGCCGTGGTATGTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457265 20 + 96509753 GGGCTGGTCGTGGTGGGTGA i macFas5.chr10 I 109 C 0 s macNem1.NW_012014244v1 16930236 20 - 16982598 GGGCTGGCCGTGGTATGTGA i macNem1.NW_012014244v1 C 0 I 9 s cerAty1.NW_012001373v1 3730122 20 - 3785965 GGGCTGGCCCTGGTGGGTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307901 20 - 90373283 AGGATGTTCATGGTGGATGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122581 20 - 179258 GGGCTGGCCGTGGTGGGTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598290 20 - 5823884 GGACTGGCCGTGGTGGGTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79576 20 + 372756 GGACTGGCTCTGGTGTGTGA i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879132 20 + 22939663 GCCCTGGTCACAGTGTGGGA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=14133.000000 s hg38.chr20_KI270870v1_alt 144032 3 + 183433 CCC s panPan2.chr20 62148032 3 + 62195757 CCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534158 3 - 578057 CCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791740 3 - 92844088 CTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457285 3 + 96509753 CCC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730142 3 - 3785965 CCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307921 3 - 90373283 CTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122601 3 - 179258 CCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598310 3 - 5823884 CCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79596 3 + 372756 CCC i calJac3.chrUn_GL286459 C 0 T 97 s otoGar3.GL873542 22879152 3 + 22939663 CCC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=6612.000000 s hg38.chr20_KI270870v1_alt 144035 2 + 183433 TG s panPan2.chr20 62148035 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534161 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791743 2 - 92844088 TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457288 2 + 96509753 AG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730145 2 - 3785965 TG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307924 2 - 90373283 GG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122604 2 - 179258 TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598313 2 - 5823884 TG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79502 2 + 372756 TG i calJac3.chrUn_GL286459 T 97 C 0 s otoGar3.GL873542 22879155 2 + 22939663 TG i otoGar3.GL873542 C 0 T 148 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=9000.000000 s hg38.chr20_KI270870v1_alt 144037 2 + 183433 GG s panPan2.chr20 62148037 2 + 62195757 GG i panPan2.chr20 C 0 T 48 s gorGor5.CYUI01015848v1 534163 2 - 578057 GG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791745 2 - 92844088 GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457290 2 + 96509753 GG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730147 2 - 3785965 GG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307926 2 - 90373283 GG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122606 2 - 179258 GG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598315 2 - 5823884 GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79504 2 + 372756 GG i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879157 148 + 22939663 T a score=39307.000000 s hg38.chr20_KI270870v1_alt 144039 14 + 183433 ATGGCCGCGGTGGG s panPan2.chr20 62147991 14 + 62195757 CTGGCCGTGGTGGG i panPan2.chr20 T 48 C 0 s gorGor5.CYUI01015848v1 534165 14 - 578057 ATGGTTGTGGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791747 14 - 92844088 CTGGCCGTGGTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457292 14 + 96509753 CTGGTCGTGGTGGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730149 14 - 3785965 CTGGCCGTGGTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307928 14 - 90373283 CTGGCGGTGGTGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122608 14 - 179258 CTGGCCGTGGTATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598317 14 - 5823884 CTGGCCGTAGTATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79506 14 + 372756 CTGGCCCTGGCATG i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T e otoGar3.GL873542 22879157 148 + 22939663 T a score=43255.000000 s hg38.chr20_KI270870v1_alt 144053 9 + 183433 TGACCCTGG s panPan2.chr20 62148005 9 + 62195757 TGACCCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534179 9 - 578057 TGACCCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791761 9 - 92844088 TGACCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457306 9 + 96509753 TGACCCTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730163 9 - 3785965 TGACCCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307942 9 - 90373283 TGACCCTGG i chlSab2.chr2 C 0 I 78 s manLeu1.NW_012101652v1 122622 9 - 179258 TGACTCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598331 9 - 5823884 TGACCCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79520 9 + 372756 TGACCCTGG i calJac3.chrUn_GL286459 C 0 I 1 s otoGar3.GL873542 22879009 9 + 22939663 TGACCATAG i otoGar3.GL873542 T 148 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=25006.000000 s hg38.chr20_KI270870v1_alt 144062 14 + 183433 AATGGTCATGATGG s panPan2.chr20 62148014 14 + 62195757 GATGGTCATGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534188 14 - 578057 GATGGTCGTGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791770 14 - 92844088 GTTGGCCGTGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457315 14 + 96509753 GCTGGTCTTTGTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730172 14 - 3785965 GCTGGCCGTGGTGG i cerAty1.NW_012001373v1 C 0 T 150 s manLeu1.NW_012101652v1 122631 14 - 179258 GCTGGCCGTGGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598340 14 - 5823884 GATGGTCATGGTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79530 14 + 372756 ATTGATCATGGTGT i calJac3.chrUn_GL286459 I 1 C 0 s otoGar3.GL873542 22879018 13 + 22939663 GAAGGCTCTCAGG- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=32518.000000 s hg38.chr20_KI270870v1_alt 144076 15 + 183433 GTGACCCTGGGCTGG s panPan2.chr20 62148028 15 + 62195757 GTGACCCTGGGCTGG i panPan2.chr20 C 0 T 93 s gorGor5.CYUI01015848v1 534202 15 - 578057 GTGACCCGGGGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791784 15 - 92844088 ATGACCCTGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457329 15 + 96509753 GTGACCCTGGGCTGG i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 122645 15 - 179258 GTGACCCTGGGCTGG i manLeu1.NW_012101652v1 C 0 T 231 s colAng1.NW_012114444v1 5598354 15 - 5823884 GTGACCCTGGGCTGG i colAng1.NW_012114444v1 C 0 T 189 s calJac3.chrUn_GL286459 79544 15 + 372756 GTGACCCTTGTCTGG i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879031 14 + 22939663 GTCATCTGGGTAAG- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=-1300.000000 s hg38.chr20_KI270870v1_alt 144091 1 + 183433 -C s gorGor5.CYUI01015848v1 534217 1 - 578057 -C i gorGor5.CYUI01015848v1 C 0 T 407 s rheMac8.chr10 92791799 1 - 92844088 -C i rheMac8.chr10 C 0 I 125 s macFas5.chr10 96457344 1 + 96509753 -C i macFas5.chr10 C 0 I 5 s calJac3.chrUn_GL286459 79559 1 + 372756 -C i calJac3.chrUn_GL286459 C 0 T 92 s otoGar3.GL873542 22879045 1 + 22939663 A- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e colAng1.NW_012114444v1 5598369 189 - 5823884 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e manLeu1.NW_012101652v1 122660 231 - 179258 T e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=-638.000000 s hg38.chr20_KI270870v1_alt 144092 3 + 183433 TGA-- s rheMac8.chr10 92791925 3 - 92844088 TGG-- i rheMac8.chr10 I 125 C 0 s macFas5.chr10 96457350 3 + 96509753 TGG-- i macFas5.chr10 I 5 C 0 s calJac3.chrUn_GL286459 79468 3 + 372756 TGT-- i calJac3.chrUn_GL286459 T 92 C 0 s otoGar3.GL873542 22879046 5 + 22939663 TGCAA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e colAng1.NW_012114444v1 5598369 189 - 5823884 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896013 0 + 57149010 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e gorGor5.CYUI01015848v1 534218 407 - 578057 T e manLeu1.NW_012101652v1 122660 231 - 179258 T e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=5940.000000 s hg38.chr20_KI270870v1_alt 144095 4 + 183433 GTGA s rheMac8.chr10 92791928 4 - 92844088 GTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457353 4 + 96509753 GTGA i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 122429 4 - 179258 GTGA i manLeu1.NW_012101652v1 T 231 C 0 s calJac3.chrUn_GL286459 79471 4 + 372756 GTGA i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56896013 4 + 57149010 GTGA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879051 4 + 22939663 CTGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e colAng1.NW_012114444v1 5598369 189 - 5823884 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e gorGor5.CYUI01015848v1 534218 407 - 578057 T e saiBol1.JH378156 16314745 97 + 16356641 T e macNem1.NW_012014244v1 16930256 9 - 16982598 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=24483.000000 s hg38.chr20_KI270870v1_alt 144099 13 + 183433 CCCTGGGCTGG-CC s rheMac8.chr10 92791932 13 - 92844088 CCCTGGGCTGG-CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457357 13 + 96509753 CCCTGGGCTGG-CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930265 13 - 16982598 CCCTGGGCTGG-CC i macNem1.NW_012014244v1 I 9 C 0 s manLeu1.NW_012101652v1 122433 13 - 179258 CCCTGGGCTGG-CC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 79475 13 + 372756 CCCTGGACTGG-TC i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56896017 13 + 57149010 CCTTGGACTGG-CC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879055 14 + 22939663 CCTAGTACTGGCCC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e colAng1.NW_012114444v1 5598369 189 - 5823884 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e gorGor5.CYUI01015848v1 534218 407 - 578057 T e saiBol1.JH378156 16314745 97 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=53688.000000 s hg38.chr20_KI270870v1_alt 144112 22 + 183433 ATGGTATGTGACCCGGGGCTGG s gorGor5.CYUI01015848v1 533811 22 - 578057 ATGGTATGTGACCCGGGGCTGG i gorGor5.CYUI01015848v1 T 407 C 0 s rheMac8.chr10 92791945 22 - 92844088 ATAGTATATGACCCTGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457370 22 + 96509753 GTGGTATGTGACCCTGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930278 22 - 16982598 GTGGTATGTGACCCTGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101652v1 122446 22 - 179258 GTGGTGGGTGACCCTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 79488 22 + 372756 ATGGTGTGTGACCCTGGGCTGG i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56896030 22 + 57149010 ATGGTATGTGACCTTGGACTGG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879069 22 + 22939663 ATAAAGCATGACATTGGACTGA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e colAng1.NW_012114444v1 5598369 189 - 5823884 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e saiBol1.JH378156 16314745 97 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=6765.000000 s hg38.chr20_KI270870v1_alt 144134 3 + 183433 CCG s gorGor5.CYUI01015848v1 533833 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791967 3 - 92844088 CCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457392 3 + 96509753 CCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930300 3 - 16982598 CCG i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101652v1 122468 3 - 179258 CCG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 79510 3 + 372756 CCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314648 3 + 16356641 CCA i saiBol1.JH378156 T 97 C 0 s micMur3.chr18 56896052 3 + 57149010 CCA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879091 3 + 22939663 TCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e colAng1.NW_012114444v1 5598369 189 - 5823884 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=5005.000000 s hg38.chr20_KI270870v1_alt 144137 1 + 183433 T s gorGor5.CYUI01015848v1 533836 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791970 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457395 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930303 1 - 16982598 T i macNem1.NW_012014244v1 C 0 T 100 s manLeu1.NW_012101652v1 122471 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598180 1 - 5823884 T i colAng1.NW_012114444v1 T 189 C 0 s calJac3.chrUn_GL286459 79513 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314651 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56896055 1 + 57149010 T i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879094 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=55605.000000 s hg38.chr20_KI270870v1_alt 144138 18 + 183433 GGTATGTGACCCCGGGAT s gorGor5.CYUI01015848v1 533837 18 - 578057 GGTATGTGACCCTGGGAC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791971 18 - 92844088 GGTGGGTGACCCTGGGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457396 18 + 96509753 GGTATGTGACCCTGGGCT i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 122472 18 - 179258 GGTGGGTGACCCTGGGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598181 18 - 5823884 GGTATGTGACCCTGGGAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79514 18 + 372756 GGCATGTGACCCTGGGAT i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16314652 18 + 16356641 AGTATGTGACCCCGGGAT i saiBol1.JH378156 C 0 I 1 s micMur3.chr18 56896056 18 + 57149010 GGTGTGTGACCTTGGACT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879095 18 + 22939663 GGTTTATGACCTTGGGCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=5255.000000 s hg38.chr20_KI270870v1_alt 144156 3 + 183433 GGT s gorGor5.CYUI01015848v1 533855 3 - 578057 GGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92791989 3 - 92844088 GGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457414 3 + 96509753 GGT i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 122490 3 - 179258 GGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598199 3 - 5823884 GTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79533 3 + 372756 GAT i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16314671 3 + 16356641 GAT i saiBol1.JH378156 I 1 C 0 s micMur3.chr18 56896074 3 + 57149010 GGC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879113 3 + 22939663 AGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I e nomLeu3.chr13 110055918 47 - 110113093 T a score=4900.000000 s hg38.chr20_KI270870v1_alt 144159 2 + 183433 CA s gorGor5.CYUI01015848v1 533858 2 - 578057 CA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055871 2 - 110113093 CA i nomLeu3.chr13 T 47 C 0 s rheMac8.chr10 92791992 2 - 92844088 TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457417 2 + 96509753 CA i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 122493 2 - 179258 CG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598202 2 - 5823884 CA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79536 2 + 372756 CA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314674 2 + 16356641 GA i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56896077 2 + 57149010 CA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879116 2 + 22939663 CA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e cerAty1.NW_012001373v1 3730186 150 - 3785965 T e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I a score=26784.000000 s hg38.chr20_KI270870v1_alt 144161 6 + 183433 TGGTGT s gorGor5.CYUI01015848v1 533860 6 - 578057 TGGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055873 6 - 110113093 TAATGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92791994 6 - 92844088 TGGTAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457419 6 + 96509753 TGGTGT i macFas5.chr10 C 0 I 70 s cerAty1.NW_012001373v1 3730036 6 - 3785965 TGGTAT i cerAty1.NW_012001373v1 T 150 C 0 s manLeu1.NW_012101652v1 122495 6 - 179258 TGGTAT i manLeu1.NW_012101652v1 C 0 T 72 s colAng1.NW_012114444v1 5598204 6 - 5823884 TGGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79538 6 + 372756 TGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314676 6 + 16356641 TGGTGT i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56896079 6 + 57149010 TGGTGT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879118 6 + 22939663 TGCTGT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I a score=60827.000000 s hg38.chr20_KI270870v1_alt 144167 18 + 183433 GTGACCCGGGGCTGGCCA s gorGor5.CYUI01015848v1 533866 18 - 578057 GTGACCCGGGGCTGGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055879 18 - 110113093 GTGACCCTGGGCTGGTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92792000 18 - 92844088 GTGACCCTGGGCTGGCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457495 18 + 96509753 GTGACCCAGGGCTGGTCG i macFas5.chr10 I 70 C 0 s cerAty1.NW_012001373v1 3730042 18 - 3785965 ATGACCCTAGGCTGGCCG i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5598210 18 - 5823884 GTGACCCTGGGCTGGCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79544 18 + 372756 GTGACCCTTGTCTGGCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314682 18 + 16356641 GTGACCCTCGTCTGGCCC i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56896085 18 + 57149010 GTGATCTTGGACTGGCCA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879124 18 + 22939663 CTGACCCTGCCCTGGTCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 93 + 62195757 T e manLeu1.NW_012101652v1 122501 72 - 179258 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I a score=28711.000000 s hg38.chr20_KI270870v1_alt 144185 6 + 183433 TGGTGG s panPan2.chr20 62147950 6 + 62195757 TGGTGG i panPan2.chr20 T 93 C 0 s gorGor5.CYUI01015848v1 533884 6 - 578057 TGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055897 6 - 110113093 TGGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92792018 6 - 92844088 TGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457513 6 + 96509753 TGGTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730060 6 - 3785965 TGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5598228 6 - 5823884 TGGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79562 6 + 372756 TGGTAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314700 6 + 16356641 TGGTAG i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56896103 6 + 57149010 TGGTGT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879142 6 + 22939663 CAGTGT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122501 72 - 179258 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479126 62 + 66533130 I a score=52629.000000 s hg38.chr20_KI270870v1_alt 144191 8 + 183433 GTGACCCC s panTro5.chr20 66479188 8 + 66533130 GTGACCCC i panTro5.chr20 I 62 C 0 s panPan2.chr20 62147956 8 + 62195757 GTGACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533890 8 - 578057 GTGACCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055903 8 - 110113093 GTGACCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92792024 8 - 92844088 GTGACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457519 8 + 96509753 GTGACCCT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730066 8 - 3785965 ATGACCCT i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5598234 8 - 5823884 GTGACCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79568 8 + 372756 GTGACCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314706 8 + 16356641 GTGACCCT i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56896109 8 + 57149010 GTGACCCC i micMur3.chr18 C 0 I 4179 s otoGar3.GL873542 22879148 8 + 22939663 GGGACCCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122501 72 - 179258 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I a score=33793.000000 s hg38.chr20_KI270870v1_alt 144199 7 + 183433 GAGCTGG s panTro5.chr20 66479196 7 + 66533130 GAGCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147964 7 + 62195757 GGGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533898 7 - 578057 GAGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055911 7 - 110113093 GGGCTGG i nomLeu3.chr13 C 0 T 27 s rheMac8.chr10 92792032 7 - 92844088 GGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457527 7 + 96509753 GGGCTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730074 7 - 3785965 GGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5598242 7 - 5823884 GGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79576 7 + 372756 GGACTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314714 7 + 16356641 GGACTGG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879156 7 + 22939663 GTCTTGG i otoGar3.GL873542 C 0 T 170 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122501 72 - 179258 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I a score=4500.000000 s hg38.chr20_KI270870v1_alt 144206 1 + 183433 C s panTro5.chr20 66479203 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147971 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533905 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792039 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457534 1 + 96509753 C i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730081 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5598249 1 - 5823884 C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79583 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314721 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e chlSab2.chr2 90307951 78 - 90373283 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122501 72 - 179258 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=-3168.000000 s hg38.chr20_KI270870v1_alt 144207 2 + 183433 -TG s panTro5.chr20 66479204 2 + 66533130 -CG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147972 2 + 62195757 -CG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533906 2 - 578057 -CG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792040 2 - 92844088 -CG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457535 2 + 96509753 -CG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730082 2 - 3785965 -CG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90308029 2 - 90373283 -CT i chlSab2.chr2 I 78 C 0 s colAng1.NW_012114444v1 5598250 2 - 5823884 -TG i colAng1.NW_012114444v1 C 0 T 48 s calJac3.chrUn_GL286459 79584 2 + 372756 TC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314722 2 + 16356641 TC- i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122501 72 - 179258 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=24789.000000 s hg38.chr20_KI270870v1_alt 144209 6 + 183433 TGGTGG s panTro5.chr20 66479206 6 + 66533130 TGGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147974 6 + 62195757 TGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533908 6 - 578057 TGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792042 6 - 92844088 TGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457537 6 + 96509753 TGGTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730084 6 - 3785965 TGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90308031 6 - 90373283 TTGCGG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598204 6 - 5823884 TGGTGG i colAng1.NW_012114444v1 T 48 C 0 s calJac3.chrUn_GL286459 79586 6 + 372756 TGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314724 6 + 16356641 TGGTGT i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122501 72 - 179258 T e macNem1.NW_012014244v1 16930304 100 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=48036.000000 s hg38.chr20_KI270870v1_alt 144215 7 + 183433 G-TGACCC s panTro5.chr20 66479212 8 + 66533130 GTTGACCC i panTro5.chr20 C 0 I 1 s panPan2.chr20 62147980 7 + 62195757 G-TGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533914 7 - 578057 G-TGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792048 7 - 92844088 G-TGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457543 7 + 96509753 G-TGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930204 7 - 16982598 G-TGACCC i macNem1.NW_012014244v1 T 100 C 0 s cerAty1.NW_012001373v1 3730090 7 - 3785965 G-TGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90308037 7 - 90373283 G-TGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122429 7 - 179258 G-TGACCC i manLeu1.NW_012101652v1 T 72 C 0 s colAng1.NW_012114444v1 5598210 7 - 5823884 G-TGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79592 7 + 372756 G-TGACCC i calJac3.chrUn_GL286459 C 0 T 135 s saiBol1.JH378156 16314730 7 + 16356641 G-TGACCC i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=43614.000000 s hg38.chr20_KI270870v1_alt 144222 8 + 183433 TGGGCTGG s panTro5.chr20 66479221 8 + 66533130 CGGGCTGG i panTro5.chr20 I 1 C 0 s panPan2.chr20 62147987 8 + 62195757 TGGGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533921 8 - 578057 TGAGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792055 8 - 92844088 TGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457550 8 + 96509753 TGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930211 8 - 16982598 TGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730097 8 - 3785965 TGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90308044 8 - 90373283 TGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122436 8 - 179258 TGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598217 8 - 5823884 TGGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16314737 8 + 16356641 TACACTGG i saiBol1.JH378156 C 0 T 76 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=31195.000000 s hg38.chr20_KI270870v1_alt 144230 6 + 183433 CCGTGG s panTro5.chr20 66479229 6 + 66533130 CCGTGG i panTro5.chr20 C 0 I 48 s panPan2.chr20 62147995 6 + 62195757 CCGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533929 6 - 578057 CCATGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792063 6 - 92844088 CCGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457558 6 + 96509753 CCGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930219 6 - 16982598 CCGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730105 6 - 3785965 CCGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90308052 6 - 90373283 CCGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122444 6 - 179258 CCGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598225 6 - 5823884 CCGTGG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 76 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=72644.000000 s hg38.chr20_KI270870v1_alt 144236 22 + 183433 TGGGTGACCCTGGGATGGCCGT s panPan2.chr20 62148001 22 + 62195757 TGGGTGACCCTGGGATGGTCAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533935 22 - 578057 TGGGTGACCCGGGGCTGGCCAT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792069 22 - 92844088 TGGGTGACCCTGGGCTGGCCGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457564 22 + 96509753 TATGTGACTCTGGGCTGGCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930225 22 - 16982598 TGGATGACCCTGGGCTGGCCGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730111 22 - 3785965 TATGTGACCCTGGGCTGGCCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90308058 22 - 90373283 TATGTGACTCTGGGTTGGCCGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122450 22 - 179258 TGGGTGACCCTGGGCTGGCCGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598231 22 - 5823884 TGGGTGACCCTGGGCTGGCTGT i colAng1.NW_012114444v1 C 0 I 48 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 76 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479235 48 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=58050.000000 s hg38.chr20_KI270870v1_alt 144258 16 + 183433 GGTGGGTGACACTGGG s panPan2.chr20 62148023 16 + 62195757 GGTGGGTGACCCTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533957 16 - 578057 GGTATGTGACCCTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792091 16 - 92844088 GGTATGTGACCCTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457586 16 + 96509753 GGTGGGTGACCCAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930247 16 - 16982598 GGTATGTGACCCTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730133 16 - 3785965 GGTGGGTGACCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90308080 16 - 90373283 GGTGGGTGACCCTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122472 16 - 179258 GGTGGGTGACCCTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598301 16 - 5823884 GGTGGGTGACCCTGGG i colAng1.NW_012114444v1 I 48 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314745 76 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479235 48 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=7177.000000 s hg38.chr20_KI270870v1_alt 144274 2 + 183433 CT s panPan2.chr20 62148039 2 + 62195757 CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533973 2 - 578057 AT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792107 2 - 92844088 CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457602 2 + 96509753 CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930263 2 - 16982598 CT i macNem1.NW_012014244v1 C 0 T 96 s cerAty1.NW_012001373v1 3730149 2 - 3785965 CT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90308096 2 - 90373283 CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122488 2 - 179258 CT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598317 2 - 5823884 CT i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16314669 2 + 16356641 TT i saiBol1.JH378156 T 76 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479235 48 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=10325.000000 s hg38.chr20_KI270870v1_alt 144276 4 + 183433 GGTG s panPan2.chr20 62148041 4 + 62195757 GGTG i panPan2.chr20 C 0 T 74 s gorGor5.CYUI01015848v1 533975 4 - 578057 GGTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792109 4 - 92844088 GGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457604 4 + 96509753 GGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930169 4 - 16982598 GGCC i macNem1.NW_012014244v1 T 96 C 0 s cerAty1.NW_012001373v1 3730151 4 - 3785965 GGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90308098 4 - 90373283 GGTG i chlSab2.chr2 C 0 T 552 s manLeu1.NW_012101652v1 122490 4 - 179258 GGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598319 4 - 5823884 GGCC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16314671 4 + 16356641 GATG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479235 48 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=48250.000000 s hg38.chr20_KI270870v1_alt 144280 12 + 183433 GTGGTGGGTGAC s gorGor5.CYUI01015848v1 533979 12 - 578057 ATGGTGGGTGAC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792113 12 - 92844088 ATGGTGGGTGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457608 12 + 96509753 GTGGTGGGTGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930173 12 - 16982598 GTGGTATGTGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730155 12 - 3785965 GTGGTGGGTGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307550 12 - 90373283 GTGGTGGGTGAC i chlSab2.chr2 T 552 C 0 s manLeu1.NW_012101652v1 122494 12 - 179258 GTGGTATGTGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598323 12 - 5823884 GTAGTATGTGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79464 12 + 372756 ATAGTGTGTGAC i calJac3.chrUn_GL286459 T 135 C 0 s saiBol1.JH378156 16314675 12 + 16356641 ATGGTGTGTGAC i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148045 74 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479235 48 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=52547.000000 s hg38.chr20_KI270870v1_alt 144292 10 + 183433 CCTTGGCTGG s panTro5.chr20 66479283 10 + 66533130 CCTCGGCTGG i panTro5.chr20 I 48 C 0 s gorGor5.CYUI01015848v1 533991 10 - 578057 CCTGGGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792125 10 - 92844088 CCTGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457620 10 + 96509753 CCTGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930185 10 - 16982598 CCTGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730167 10 - 3785965 CCTGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307562 10 - 90373283 CCTGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122506 10 - 179258 CCTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598335 10 - 5823884 CCTGGGATGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79476 10 + 372756 CCTGGACTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314687 10 + 16356641 CCTCGTCTGG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148045 74 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=12709.000000 s hg38.chr20_KI270870v1_alt 144302 2 + 183433 CC s panTro5.chr20 66479293 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147971 2 + 62195757 CC i panPan2.chr20 T 74 C 0 s gorGor5.CYUI01015848v1 534001 2 - 578057 CC i gorGor5.CYUI01015848v1 C 0 T 192 s rheMac8.chr10 92792135 2 - 92844088 CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457630 2 + 96509753 CC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930195 2 - 16982598 CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730177 2 - 3785965 CC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307572 2 - 90373283 CC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122516 2 - 179258 CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598345 2 - 5823884 TC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79486 2 + 372756 TC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314697 2 + 16356641 CC i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=32157.000000 s hg38.chr20_KI270870v1_alt 144304 7 + 183433 GTGGTGG s panTro5.chr20 66479295 7 + 66533130 GTGGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147973 7 + 62195757 GTGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533811 7 - 578057 ATGGTAT i gorGor5.CYUI01015848v1 T 192 C 0 s rheMac8.chr10 92792137 7 - 92844088 CTGGTGG i rheMac8.chr10 C 0 I 118 s macFas5.chr10 96457632 7 + 96509753 CTGGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930197 7 - 16982598 GTGGTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730179 7 - 3785965 GTGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307574 7 - 90373283 GTGGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122518 7 - 179258 GTGGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598347 7 - 5823884 ATGGTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79488 7 + 372756 ATGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314699 7 + 16356641 CTGGTAG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=45396.000000 s hg38.chr20_KI270870v1_alt 144311 6 + 183433 GTGACC s panTro5.chr20 66479302 6 + 66533130 GTGACC i panTro5.chr20 C 0 I 167 s panPan2.chr20 62147980 6 + 62195757 GTGACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533818 6 - 578057 GTGACC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792262 6 - 92844088 GTGACC i rheMac8.chr10 I 118 C 0 s macFas5.chr10 96457639 6 + 96509753 GTGACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930204 6 - 16982598 GTGACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730186 6 - 3785965 GTGACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307581 6 - 90373283 GTGACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122525 6 - 179258 GTGACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598354 6 - 5823884 GTGACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79495 6 + 372756 GTGACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314706 6 + 16356641 GTGACC i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=50105.000000 s hg38.chr20_KI270870v1_alt 144317 9 + 183433 CTTGGCTGG s panPan2.chr20 62147986 9 + 62195757 CTGGGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533824 9 - 578057 CGGGGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792268 9 - 92844088 CTGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457645 9 + 96509753 CTGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930210 9 - 16982598 CTGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730192 9 - 3785965 CTGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307587 9 - 90373283 CAGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122531 9 - 179258 CTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598360 9 - 5823884 CTGGGCTGG i colAng1.NW_012114444v1 C 0 T 165 s calJac3.chrUn_GL286459 79501 9 + 372756 CTGGGCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314712 9 + 16356641 CTGGACTGG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=5826.000000 s hg38.chr20_KI270870v1_alt 144326 2 + 183433 -CT s panPan2.chr20 62147995 2 + 62195757 -CC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533833 2 - 578057 -CT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792277 2 - 92844088 -CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457654 2 + 96509753 -CC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930219 2 - 16982598 -CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730201 2 - 3785965 -CC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307596 2 - 90373283 -TC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122540 2 - 179258 -CC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 79510 3 + 372756 CCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314721 3 + 16356641 CTC i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598369 165 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879163 170 + 22939663 T a score=3321.000000 s hg38.chr20_KI270870v1_alt 144328 1 + 183433 G s panPan2.chr20 62147997 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533835 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792279 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457656 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930221 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730203 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307598 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122542 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s otoGar3.GL873542 22878993 1 + 22939663 G i otoGar3.GL873542 T 170 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598369 165 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314724 0 + 16356641 C e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79513 0 + 372756 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=67604.000000 s hg38.chr20_KI270870v1_alt 144329 14 + 183433 TGGTGGG--------TGACC-----CT s panPan2.chr20 62147998 14 + 62195757 TGGTGGG--------TGACC-----CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533836 14 - 578057 TGGTATG--------TGACC-----CT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792280 14 - 92844088 TGGTGGG--------TGACC-----CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457657 14 + 96509753 TGGTATG--------TGACT-----CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930222 14 - 16982598 TGGTGGA--------TGACC-----CT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730204 19 - 3785965 TGGTGGG--------TGACCCTGGGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307599 14 - 90373283 TGGCAGA--------TGACC-----CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122543 14 - 179258 TGGTGGG--------TGACC-----CT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598204 14 - 5823884 TGGTGGG--------TGACC-----CT i colAng1.NW_012114444v1 T 165 C 0 s calJac3.chrUn_GL286459 79513 14 + 372756 TGGCATG--------TGACC-----CT i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16314724 14 + 16356641 TGGTGTG--------TGACC-----CT i saiBol1.JH378156 C 0 T 69 s otoGar3.GL873542 22878994 22 + 22939663 TGATGGGAATCAATTTGACC-----AT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=34638.000000 s hg38.chr20_KI270870v1_alt 144343 9 + 183433 TGGATGGCT s panPan2.chr20 62148012 9 + 62195757 GGGATGGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533850 9 - 578057 GGGACGGTC i gorGor5.CYUI01015848v1 C 0 T 48 s rheMac8.chr10 92792294 9 - 92844088 GGGCTGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457671 9 + 96509753 GGGCTGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930236 9 - 16982598 GGGCTGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730223 9 - 3785965 GGGCTGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307613 9 - 90373283 GGGCTGGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122557 9 - 179258 GGGCTGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598218 9 - 5823884 GGGCTGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79528 9 + 372756 GGATTGATC i calJac3.chrUn_GL286459 I 1 C 0 s otoGar3.GL873542 22879016 9 + 22939663 AGGAAGGCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=43394.000000 s hg38.chr20_KI270870v1_alt 144352 11 + 183433 GTGGTGGGTGA s panPan2.chr20 62148021 11 + 62195757 ATGGTGGGTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533811 11 - 578057 ATGGTATGTGA i gorGor5.CYUI01015848v1 T 48 C 0 s rheMac8.chr10 92792303 11 - 92844088 GTGGCGGGTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457680 11 + 96509753 GTGGTGGGTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930245 11 - 16982598 GTGGTATGTGA i macNem1.NW_012014244v1 C 0 T 297 s cerAty1.NW_012001373v1 3730232 11 - 3785965 GTGGTGGGTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307622 11 - 90373283 GTGGCAGGTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122566 11 - 179258 GTGGTATGTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598227 11 - 5823884 GTGGTGGGTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79537 11 + 372756 ATGGTGTGTGA i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879025 0 + 22939663 C a score=32328.000000 s hg38.chr20_KI270870v1_alt 144363 7 + 183433 CCCTGGG s panPan2.chr20 62148032 7 + 62195757 CCCTGGG i panPan2.chr20 C 0 T 91 s gorGor5.CYUI01015848v1 533822 7 - 578057 CCCGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792314 7 - 92844088 CCCAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457691 7 + 96509753 CCCTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929959 7 - 16982598 CCCTGGG i macNem1.NW_012014244v1 T 297 C 0 s cerAty1.NW_012001373v1 3730243 7 - 3785965 CCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307633 7 - 90373283 CCCTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122577 7 - 179258 CTCTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598238 7 - 5823884 CCCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79548 7 + 372756 CCCTTGT i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879025 7 + 22939663 CTCAGGG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=18667.000000 s hg38.chr20_KI270870v1_alt 144370 7 + 183433 ----ATGGCTG s gorGor5.CYUI01015848v1 533829 7 - 578057 ----CTGGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792321 7 - 92844088 ----CTGGCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457698 7 + 96509753 ----CTGGCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929966 7 - 16982598 ----CTGGCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730250 7 - 3785965 ----CTGGCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307640 7 - 90373283 ----CTGGCCG i chlSab2.chr2 C 0 T 144 s manLeu1.NW_012101652v1 122584 7 - 179258 ----CTGGCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598245 7 - 5823884 ----CTGGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79555 7 + 372756 ----CTGGCTC i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879032 7 + 22939663 TCATCTG---- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148039 91 + 62195757 T e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=14841.000000 s hg38.chr20_KI270870v1_alt 144377 6 + 183433 TGGTGG- s gorGor5.CYUI01015848v1 533836 6 - 578057 TGGTAT- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792328 6 - 92844088 TGGCGG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457705 6 + 96509753 TGGTGG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929973 6 - 16982598 TGGTAT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730257 6 - 3785965 TGGTGG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307503 6 - 90373283 TGGTGC- i chlSab2.chr2 T 144 C 0 s manLeu1.NW_012101652v1 122591 6 - 179258 TGGTGG- i manLeu1.NW_012101652v1 C 0 T 168 s colAng1.NW_012114444v1 5598252 6 - 5823884 TGGTAG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79562 6 + 372756 TGGTAG- i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879039 6 + 22939663 -GGTAAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148039 91 + 62195757 T e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=46904.000000 s hg38.chr20_KI270870v1_alt 144383 16 + 183433 GTGACACTGGGCTGGC s gorGor5.CYUI01015848v1 533842 16 - 578057 GTGACCCTGGGACGGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792334 16 - 92844088 GTGACTCTGGGCTGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457711 16 + 96509753 GTGACCCTGGGCTGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929979 16 - 16982598 GTGACTCTGGGCTGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730263 16 - 3785965 GTGACCCTGGGATGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307509 16 - 90373283 GTGACCCTGGGCTGGC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598258 16 - 5823884 GTGACCCTGGGCTGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79568 16 + 372756 GTGACCCTGGACTGGC i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879045 16 + 22939663 ATGCAACTGGCCTAGT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148039 91 + 62195757 T e manLeu1.NW_012101652v1 122597 168 - 179258 T e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=-2878.000000 s hg38.chr20_KI270870v1_alt 144399 1 + 183433 -T s panPan2.chr20 62147948 1 + 62195757 -T i panPan2.chr20 T 91 C 0 s gorGor5.CYUI01015848v1 533858 1 - 578057 -C i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792350 1 - 92844088 -C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457727 1 + 96509753 -C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929995 1 - 16982598 -C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730279 1 - 3785965 -C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307525 1 - 90373283 -C i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598274 1 - 5823884 -C i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79584 1 + 372756 -T i calJac3.chrUn_GL286459 C 0 T 121 s otoGar3.GL873542 22879061 1 + 22939663 A- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122597 168 - 179258 T e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=80929.000000 s hg38.chr20_KI270870v1_alt 144400 24 + 183433 -------GTGGTGGGTGACACTGGGCTGGCT s panPan2.chr20 62147949 24 + 62195757 -------GTGGTGGGTGACCCTGGGCTGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533859 24 - 578057 -------ATGGTGTGTGACCCGGGGCTGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792351 24 - 92844088 -------GTGGTGGGTGACCCAGGGCTGGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457728 24 + 96509753 -------GTGGTATGTGACTCTGGGCTGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929996 24 - 16982598 -------GTGGTGGGTGACCCTGGGCTGGCT i macNem1.NW_012014244v1 C 0 T 94 s cerAty1.NW_012001373v1 3730280 24 - 3785965 -------ATGGTATGTGACCCTGGGCTGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307526 24 - 90373283 -------GTGGTGGGTGATCCAGGGCTGGCC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598275 24 - 5823884 -------ATGGTGGGTGATGCTGGACTGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79464 24 + 372756 -------ATAGTGTGTGACCCTGGACTGGTC i calJac3.chrUn_GL286459 T 121 C 0 s otoGar3.GL873542 22879062 31 + 22939663 CTGGCCCATAAAGCATGACATTGGACTGATC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122597 168 - 179258 T e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=3914.000000 s hg38.chr20_KI270870v1_alt 144424 2 + 183433 GT s panPan2.chr20 62147973 2 + 62195757 GT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533883 2 - 578057 AT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792375 2 - 92844088 TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457752 2 + 96509753 AT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730304 2 - 3785965 AT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307550 2 - 90373283 GT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598299 2 - 5823884 GT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79488 2 + 372756 AT i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879093 2 + 22939663 AT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122597 168 - 179258 T e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479308 167 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=18864.000000 s hg38.chr20_KI270870v1_alt 144426 5 + 183433 GGTGG s panTro5.chr20 66479475 5 + 66533130 GGTGG i panTro5.chr20 I 167 C 0 s panPan2.chr20 62147975 5 + 62195757 GGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533885 5 - 578057 GGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792377 5 - 92844088 TGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457754 5 + 96509753 GGTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730306 5 - 3785965 GGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307552 5 - 90373283 GGTGG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598301 5 - 5823884 GGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79490 5 + 372756 GGTGT i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879095 5 + 22939663 GGTTT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122597 168 - 179258 T e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=101178.000000 s hg38.chr20_KI270870v1_alt 144431 17 + 183433 GTGACCCTGGGCTGGCC s panTro5.chr20 66479480 17 + 66533130 GTGACCCTGGGCTGGCC i panTro5.chr20 C 0 I 60 s panPan2.chr20 62147980 17 + 62195757 GTGACCCTGGGCTGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533890 17 - 578057 GTGACCCTGAGCTGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792382 17 - 92844088 GTGACCCTGGGCTGGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457759 17 + 96509753 GTGACCCTGGGTTGGCC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730311 17 - 3785965 GTGACCCTGGGCTGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307557 17 - 90373283 GTGACCCTGGGCTGGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122429 17 - 179258 GTGACCCTGGGCTGGCC i manLeu1.NW_012101652v1 T 168 C 0 s colAng1.NW_012114444v1 5598306 17 - 5823884 GTGACCCTGGGCTGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79495 17 + 372756 GTGACCCTGGGCTGGCC i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879100 17 + 22939663 ATGACCTTGGGCTAGCC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=70497.000000 s hg38.chr20_KI270870v1_alt 144448 21 + 183433 GTGGTGGGTGACGCTGGGATG s panPan2.chr20 62147997 21 + 62195757 GTGGTGGGTGACCCTGGGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533907 21 - 578057 GTGGTGGGTGACCCTGAGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792399 21 - 92844088 TTTGTGGGTGACCCTGGGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457776 21 + 96509753 GTGGTGGATGACCCTGGGCTG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730328 21 - 3785965 GTGGTGGGTGACCCTGAGCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307574 21 - 90373283 GTGGTGGGTGACCCAGGGCTG i chlSab2.chr2 C 0 T 96 s manLeu1.NW_012101652v1 122446 21 - 179258 GTGGTGGGTGACCCTGGGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598323 21 - 5823884 GTAGTATGTGACCCTGGGATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79512 21 + 372756 CTGGCATGTGACCCTGGGATT i calJac3.chrUn_GL286459 C 0 I 1 s otoGar3.GL873542 22879117 21 + 22939663 ATGCTGTCTGACCCTGCCCTG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479497 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=13437.000000 s hg38.chr20_KI270870v1_alt 144469 4 + 183433 GTCA s panPan2.chr20 62148018 4 + 62195757 GTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533928 4 - 578057 GCCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792420 4 - 92844088 GTCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457797 4 + 96509753 GCCA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730349 4 - 3785965 GCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307499 4 - 90373283 GTCA i chlSab2.chr2 T 96 C 0 s manLeu1.NW_012101652v1 122467 4 - 179258 GCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598344 4 - 5823884 GTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79534 4 + 372756 ATCA i calJac3.chrUn_GL286459 I 1 C 0 s otoGar3.GL873542 22879138 4 + 22939663 GTCA i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479497 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=21415.000000 s hg38.chr20_KI270870v1_alt 144473 6 + 183433 TGGTGG s panTro5.chr20 66479557 6 + 66533130 TGGTGG i panTro5.chr20 I 60 C 0 s panPan2.chr20 62148022 6 + 62195757 TGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533932 6 - 578057 TGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792424 6 - 92844088 TGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457801 6 + 96509753 TAGTAT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730353 6 - 3785965 TGATAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307503 6 - 90373283 TGGTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122471 6 - 179258 TGGTGG i manLeu1.NW_012101652v1 C 0 T 48 s colAng1.NW_012114444v1 5598348 6 - 5823884 TGGTGA i colAng1.NW_012114444v1 C 0 T 168 s calJac3.chrUn_GL286459 79538 6 + 372756 TGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879142 6 + 22939663 CAGTGT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=39155.000000 s hg38.chr20_KI270870v1_alt 144479 9 + 183433 GTGACCCTG s panTro5.chr20 66479563 9 + 66533130 GTGACCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148028 9 + 62195757 GTGACCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533938 9 - 578057 GTGACCCGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792430 9 - 92844088 GTGACCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457807 9 + 96509753 ATGACCCTG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730359 9 - 3785965 GTGACTCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307509 9 - 90373283 GTGACCCTG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598186 9 - 5823884 GTGACCCTG i colAng1.NW_012114444v1 T 168 C 0 s calJac3.chrUn_GL286459 79544 9 + 372756 GTGACCCTT i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22879148 9 + 22939663 GGGACCCTG i otoGar3.GL873542 C 0 T 58 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122477 48 - 179258 T e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=7074.000000 s hg38.chr20_KI270870v1_alt 144488 2 + 183433 GG s panTro5.chr20 66479572 2 + 66533130 GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148037 2 + 62195757 GG i panPan2.chr20 C 0 T 88 s gorGor5.CYUI01015848v1 533947 2 - 578057 GG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792439 2 - 92844088 GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457816 2 + 96509753 GG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730368 2 - 3785965 GG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307518 2 - 90373283 GG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598195 2 - 5823884 GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79553 2 + 372756 GT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122477 48 - 179258 T e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=13452.000000 s hg38.chr20_KI270870v1_alt 144490 8 + 183433 ATGGCCGC s panTro5.chr20 66479574 8 + 66533130 ATGGCCGC i panTro5.chr20 C 0 I 15 s gorGor5.CYUI01015848v1 533949 8 - 578057 CTGGCCAT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792441 8 - 92844088 CTGGTCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457818 8 + 96509753 CTGGCCGT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730370 8 - 3785965 CTGGCCGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307520 8 - 90373283 CTGGCCGT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598197 8 - 5823884 ATGTTCAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79555 8 + 372756 CTGGCTCT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148039 88 + 62195757 T e manLeu1.NW_012101652v1 122477 48 - 179258 T e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=12409.000000 s hg38.chr20_KI270870v1_alt 144498 5 + 183433 GGTGG s panPan2.chr20 62147951 5 + 62195757 GGTGG i panPan2.chr20 T 88 C 0 s gorGor5.CYUI01015848v1 533957 5 - 578057 GGTAT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792449 5 - 92844088 TGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457826 5 + 96509753 GGTGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730378 5 - 3785965 GGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307528 5 - 90373283 GGTGG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598205 5 - 5823884 GGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79563 5 + 372756 GGTAG i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122477 48 - 179258 T e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479582 15 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=53571.000000 s hg38.chr20_KI270870v1_alt 144503 14 + 183433 GTGACCCTGGGCTG s panPan2.chr20 62147956 14 + 62195757 GTGACCCTGGGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533962 14 - 578057 GTGACCCTGGAATG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792454 14 - 92844088 GTGACCCTGGACTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457831 14 + 96509753 GTGACCCTGGGCTG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730383 14 - 3785965 GTGACCCTGGGCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307533 14 - 90373283 GTGATCCAGGGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122429 14 - 179258 GTGACCCTGGGCTG i manLeu1.NW_012101652v1 T 48 C 0 s colAng1.NW_012114444v1 5598210 14 - 5823884 GTGACCCTGGGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79568 14 + 372756 GTGACCCTGGACTG i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479582 15 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=18780.000000 s hg38.chr20_KI270870v1_alt 144517 5 + 183433 GCCGC s panTro5.chr20 66479597 5 + 66533130 GCCGC i panTro5.chr20 I 15 C 0 s panPan2.chr20 62147970 5 + 62195757 GCCGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533976 5 - 578057 GTCAT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792468 5 - 92844088 GCCGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457845 5 + 96509753 GCCGT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730397 5 - 3785965 GCCGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307547 5 - 90373283 GCCGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122443 5 - 179258 GCCGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598224 5 - 5823884 GCCGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79582 5 + 372756 GCTCT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e macNem1.NW_012014244v1 16930020 94 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=67543.000000 s hg38.chr20_KI270870v1_alt 144522 12 + 183433 GGTGGGTGACCC s panTro5.chr20 66479602 12 + 66533130 GGTGGGTGACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147975 12 + 62195757 GGTGGGTGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533981 12 - 578057 GGTGGGTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792473 12 - 92844088 GGTATGTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457850 12 + 96509753 GGTGGGTGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929926 12 - 16982598 GGTGGGTGACCC i macNem1.NW_012014244v1 T 94 C 0 s cerAty1.NW_012001373v1 3730402 12 - 3785965 GGTATGTGACTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307552 12 - 90373283 GGTGGGTGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122448 12 - 179258 GGTGGGTGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598229 12 - 5823884 GGTGGGTGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79587 12 + 372756 GGTGTGTGACCC i calJac3.chrUn_GL286459 C 0 T 135 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=19365.000000 s hg38.chr20_KI270870v1_alt 144534 4 + 183433 TGGG s panTro5.chr20 66479614 4 + 66533130 TGGG i panTro5.chr20 C 0 I 190 s panPan2.chr20 62147987 4 + 62195757 TGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533993 4 - 578057 TGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792485 4 - 92844088 TGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457862 4 + 96509753 TGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929938 4 - 16982598 AGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730414 4 - 3785965 TGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307564 4 - 90373283 TGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122460 4 - 179258 TGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598241 4 - 5823884 TGGG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=108229.000000 s hg38.chr20_KI270870v1_alt 144538 30 + 183433 CTGGACGTGGTGGGTGACCCTGGGATGGCC s panPan2.chr20 62147991 30 + 62195757 CTGGCCGTGGTGGGTGACCCTGGGATGGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533997 30 - 578057 CTGGCCGCGGTGGGTGACCCTGGGATGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792489 30 - 92844088 CTGGTCGTGGTGGGTGACCCTGGGCTGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457866 30 + 96509753 CTGGCCATAGTATATGACCCTGGGCTGGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929942 30 - 16982598 CTGGCCCTGGTGGGTGACCCTGGGCTGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730418 30 - 3785965 CTGGCCGTGGTGGGTGACCCTGGGCTGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307568 30 - 90373283 CTGGCCGTGGTGGGTGACCCAGGGCTGGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122464 30 - 179258 CTGGCCGTGGTGGGTGACCCTGGGCTGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598245 30 - 5823884 CTGGCTGTGGTAGGTGACCCTGGGCTGGCC i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479618 190 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=4596.000000 s hg38.chr20_KI270870v1_alt 144568 2 + 183433 GC s panPan2.chr20 62148021 2 + 62195757 AT i panPan2.chr20 C 0 T 72 s gorGor5.CYUI01015848v1 534027 2 - 578057 GC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792519 2 - 92844088 GT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457896 2 + 96509753 AT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929972 2 - 16982598 GT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730448 2 - 3785965 GT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307598 2 - 90373283 GT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122494 2 - 179258 GT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598275 2 - 5823884 AT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79464 2 + 372756 AT i calJac3.chrUn_GL286459 T 135 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479618 190 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=16141.000000 s hg38.chr20_KI270870v1_alt 144570 5 + 183433 GGTGG s panPan2.chr20 62147951 5 + 62195757 GGTGG i panPan2.chr20 T 72 C 0 s gorGor5.CYUI01015848v1 534029 5 - 578057 GGTGG i gorGor5.CYUI01015848v1 C 0 T 385 s rheMac8.chr10 92792521 5 - 92844088 GGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457898 5 + 96509753 GGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929974 5 - 16982598 GGTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730450 5 - 3785965 GGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307600 5 - 90373283 GGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122496 5 - 179258 GGTAT i manLeu1.NW_012101652v1 C 0 T 72 s colAng1.NW_012114444v1 5598277 5 - 5823884 GGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79466 5 + 372756 AGTGT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479618 190 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=209968.000000 s hg38.chr20_KI270870v1_alt 144575 48 + 183433 GTGACCCTGGGCTGGCCGCGGTGGGTGACCCTGGGCTGGCCGCGGTGG s panPan2.chr20 62147956 48 + 62195757 GTGACCCTGGGCTGGCCGTGGTGGGTGACCCTGGGCTGGCCGTGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533649 48 - 578057 GTGACCCTGGGCTGGCCATGGTGGGTGACCCTGGGCTGGCTGTGGTGG i gorGor5.CYUI01015848v1 T 385 C 0 s rheMac8.chr10 92792526 48 - 92844088 GTGACCCTGGGCTGGCCGTGGTATGTGACTCTGGGCTGGCCGTGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457903 48 + 96509753 GTGACCCTGGGCTGGCCCTGGTGGGTGACCCTGGGCTGGCCATAGTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16929979 48 - 16982598 GTGACTCTGGGCTGGCCGTGGTGGGTGACCCTGGGCTGGCTGTGGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730455 48 - 3785965 GTGACCCAGGGCTGGCCGTGGTGGGTGACCCTGGGCTGGCTGTGGTAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307605 48 - 90373283 ATGACCCTGGGCTGGCCGTGGCAGGTGACCCTGGGCTGGCCGTGGTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122429 48 - 179258 GTGACCCTGGGCTGGCCGTGGTGGGTGACCCTGGGCTGGCCGTGGTGG i manLeu1.NW_012101652v1 T 72 C 0 s colAng1.NW_012114444v1 5598282 48 - 5823884 GTGATGCTGGACTGGCCGTGGTGGGTGACCCTGGGCTGGCCGTAGTAT i colAng1.NW_012114444v1 C 0 T 144 s calJac3.chrUn_GL286459 79471 48 + 372756 GTGACCCTGGACTGGTCATGGTGTGTGACCCTGGGCTGGCCCTGGCAT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479618 190 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=89879.000000 s hg38.chr20_KI270870v1_alt 144623 24 + 183433 GTGACCCTGGG-ATGGTCGCGGTGG s panPan2.chr20 62148004 24 + 62195757 GTGACCCTGGG-ATGGTCATGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533697 24 - 578057 GTGACCCTGGG-CTGGCCGTGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792574 24 - 92844088 GTGACCCTCGG-CTGGCCGTGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457951 24 + 96509753 ATGACCCTGGG-CTGGCCGTGGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930027 24 - 16982598 GTGACCCTGGG-TTGGCCGTGGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730503 24 - 3785965 GTGACCCTGGG-CTGGTCTTTGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90307653 24 - 90373283 GTGACTCTGGG-CTGGCCGTGGTAT i chlSab2.chr2 C 0 I 14677 s manLeu1.NW_012101652v1 122477 24 - 179258 GTGACCCTGGG-CTGGCCGTGGTAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598186 24 - 5823884 GTGACCCTGGG-ATGTTCATGGTGG i colAng1.NW_012114444v1 T 144 C 0 s calJac3.chrUn_GL286459 79519 25 + 372756 GTGACCCTGGGATTGATCATGGTGT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479618 190 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=19700.000000 s hg38.chr20_KI270870v1_alt 144647 4 + 183433 GTGA s panPan2.chr20 62148028 4 + 62195757 GTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533721 4 - 578057 GTGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792598 4 - 92844088 GTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457975 4 + 96509753 GTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930051 4 - 16982598 ATGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730527 4 - 3785965 GTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322354 4 - 90373283 GTGA i chlSab2.chr2 I 14677 C 0 s manLeu1.NW_012101652v1 122501 4 - 179258 GTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598210 4 - 5823884 GTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79544 4 + 372756 GTGA i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479618 190 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=37290.000000 s hg38.chr20_KI270870v1_alt 144651 7 + 183433 CCCTGGG s panTro5.chr20 66479808 7 + 66533130 CCCTGGG i panTro5.chr20 I 190 C 0 s panPan2.chr20 62148032 7 + 62195757 CCCTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533725 7 - 578057 CCCTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792602 7 - 92844088 CCCTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457979 7 + 96509753 CCCTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930055 7 - 16982598 CCCTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730531 7 - 3785965 TCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322358 7 - 90373283 CCCTGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122505 7 - 179258 CCCTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598214 7 - 5823884 CCCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79548 7 + 372756 CCCTTGT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 69 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=22780.000000 s hg38.chr20_KI270870v1_alt 144658 4 + 183433 CTGG s panTro5.chr20 66479815 4 + 66533130 CTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148039 4 + 62195757 CTGG i panPan2.chr20 C 0 T 94 s gorGor5.CYUI01015848v1 533732 4 - 578057 CTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792609 4 - 92844088 CTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457986 4 + 96509753 CTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930062 4 - 16982598 CTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730538 4 - 3785965 TTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322365 4 - 90373283 CTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122512 4 - 179258 CTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598221 4 - 5823884 CTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79555 4 + 372756 CTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314669 3 + 16356641 -TTG i saiBol1.JH378156 T 69 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=5281.000000 s hg38.chr20_KI270870v1_alt 144662 2 + 183433 CC s panTro5.chr20 66479819 2 + 66533130 CC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533736 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792613 2 - 92844088 CC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457990 2 + 96509753 CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930066 2 - 16982598 CC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730542 2 - 3785965 CC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322369 2 - 90373283 TC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122516 2 - 179258 CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598225 2 - 5823884 CC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79559 2 + 372756 CT i calJac3.chrUn_GL286459 C 0 T 97 s saiBol1.JH378156 16314672 2 + 16356641 AT i saiBol1.JH378156 C 0 I 1 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 94 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=37018.000000 s hg38.chr20_KI270870v1_alt 144664 8 + 183433 GTGGTGGG s panTro5.chr20 66479821 8 + 66533130 GTGGTGGG i panTro5.chr20 C 0 I 280 s panPan2.chr20 62147949 8 + 62195757 GTGGTGGG i panPan2.chr20 T 94 C 0 s gorGor5.CYUI01015848v1 533738 8 - 578057 GTGGTATG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792615 8 - 92844088 GTGGTATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457992 8 + 96509753 GTGGTATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930068 8 - 16982598 ATAGTATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730544 8 - 3785965 GTGGTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322371 8 - 90373283 ATGGTGCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122518 8 - 179258 GTGGTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598227 8 - 5823884 GTGGTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79464 8 + 372756 ATAGTGTG i calJac3.chrUn_GL286459 T 97 C 0 s saiBol1.JH378156 16314675 8 + 16356641 ATGGTGTG i saiBol1.JH378156 I 1 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=223068.000000 s hg38.chr20_KI270870v1_alt 144672 40 + 183433 TGACCCTGGGATGGCCGTGGTGGGTGACCCTGGGCTGGCT s panPan2.chr20 62147957 40 + 62195757 TGACCCTGGGCTGGCCGTGGTGGGTGACCCTGGGCTGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533746 40 - 578057 TGACCCTGGGCTGGCCGTGGTGGGTGACCCTGAGCTGGCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792623 40 - 92844088 TGACTCTGGGCTGGCCGTGGTGGGTGACCCTGGGCTGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458000 40 + 96509753 TGACCCTGGGCTGGCCGTGGTGGGTGACCCTGGGCTGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930076 40 - 16982598 TGACCCTGGGCTGGCCGTGGTGGGTGACCCTGGGCTGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730552 40 - 3785965 TGACCCTGGGCTGGTCATGGTAGGTGACCCTGGGCTGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322379 40 - 90373283 TGACCCTGGGCTGGCCGTGGTGGGTGATCCAGGGCTGGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122526 40 - 179258 TGACCCTGGGCTGGCCGTGGTGGGTGACCCTGGGCTGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598235 40 - 5823884 TGACCCTGGGCTGGCTGTGGTAGGTGACCCTGGGCTGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79472 40 + 372756 TGACCCTGGACTGGTCATGGTGTGTGACCCTGGGCTGGCC i calJac3.chrUn_GL286459 C 0 T 48 s saiBol1.JH378156 16314683 40 + 16356641 TGACCCTCGTCTGGCCCTGGTAGGTGACCCTGGACTGGCT i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479829 280 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=72424.000000 s hg38.chr20_KI270870v1_alt 144712 15 + 183433 GTGGTGGGTGACCCT s panPan2.chr20 62147997 15 + 62195757 GTGGTGGGTGACCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533786 15 - 578057 GTGGTGGGTGACCCG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92792663 15 - 92844088 GTGGTGGATGACCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458040 15 + 96509753 GTGGTGGGTGACCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930116 15 - 16982598 GTGGTGGGTGACCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730592 15 - 3785965 GTGGTAGGTGACCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322419 15 - 90373283 GTGGTGGGTGACCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122566 15 - 179258 GTGGTATGTGACTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598275 15 - 5823884 ATGGTGGGTGATGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79464 15 + 372756 ATAGTGTGTGACCCT i calJac3.chrUn_GL286459 T 48 C 0 s saiBol1.JH378156 16314723 15 + 16356641 CTGGTGTGTGACCCT i saiBol1.JH378156 C 0 T 62 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479829 280 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=41194.000000 s hg38.chr20_KI270870v1_alt 144727 11 + 183433 GGGATGGTCGC s panPan2.chr20 62148012 11 + 62195757 GGGATGGTCAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533801 11 - 578057 GGGCTGGCCCA i gorGor5.CYUI01015848v1 C 0 I 1 s rheMac8.chr10 92792678 11 - 92844088 GGGCTGGCCGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458055 11 + 96509753 GGGCTGGCCGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930131 11 - 16982598 GGGCTGGCCGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730607 11 - 3785965 GGACTGGCCGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322434 11 - 90373283 GGGCTGGTCGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122581 11 - 179258 GGGCTGGCCGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598290 11 - 5823884 GGACTGGCCGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79479 11 + 372756 GGACTGGTCAT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 62 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66479829 280 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=21940.000000 s hg38.chr20_KI270870v1_alt 144738 5 + 183433 GGTGG s panTro5.chr20 66480109 5 + 66533130 GGTGG i panTro5.chr20 I 280 C 0 s panPan2.chr20 62148023 5 + 62195757 GGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533813 5 - 578057 GGTAT i gorGor5.CYUI01015848v1 I 1 C 0 s rheMac8.chr10 92792689 5 - 92844088 GGTGG i rheMac8.chr10 C 0 I 407 s macFas5.chr10 96458066 5 + 96509753 GGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930142 5 - 16982598 GGTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730618 5 - 3785965 GGTAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322445 5 - 90373283 GGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122592 5 - 179258 GGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598301 5 - 5823884 GGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79490 5 + 372756 GGTGT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 62 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=90673.000000 s hg38.chr20_KI270870v1_alt 144743 15 + 183433 GTGACCCTGGGCTGG s panTro5.chr20 66480114 15 + 66533130 GGGACCCTGGGCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148028 15 + 62195757 GTGACCCTGGGCTGG i panPan2.chr20 C 0 T 48 s gorGor5.CYUI01015848v1 533818 15 - 578057 GTGACCCGGGGCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793101 15 - 92844088 GTGACCCTGGGCTGG i rheMac8.chr10 I 407 C 0 s macFas5.chr10 96458071 15 + 96509753 GTGACCCTGGGCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930147 15 - 16982598 GTGACTCTGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730623 15 - 3785965 GTGACCCTGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322450 15 - 90373283 GTGACCCTGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122597 15 - 179258 GTGACCCTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598306 15 - 5823884 GTGACCCTGGGCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79495 15 + 372756 GTGACCCTGGGCTGG i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 62 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=12199.000000 s hg38.chr20_KI270870v1_alt 144758 3 + 183433 -CCG s panTro5.chr20 66480129 3 + 66533130 -CCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147995 3 + 62195757 -CCG i panPan2.chr20 T 48 C 0 s gorGor5.CYUI01015848v1 533833 3 - 578057 -CTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793116 3 - 92844088 -CCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458086 3 + 96509753 -CCG i macFas5.chr10 C 0 I 404 s macNem1.NW_012014244v1 16930162 3 - 16982598 -CCG i macNem1.NW_012014244v1 C 0 I 9 s cerAty1.NW_012001373v1 3730638 3 - 3785965 -CCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322465 3 - 90373283 -CCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122612 3 - 179258 -CCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598321 3 - 5823884 -CCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79510 3 + 372756 CCC- i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 62 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=98656.000000 s hg38.chr20_KI270870v1_alt 144761 24 + 183433 TG---GT-GGGTGACCCTGGGA-TGGCCG s panTro5.chr20 66480132 28 + 66533130 TGTATGTGGGGTGACCCTGGGC-TGGCCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62147998 24 + 62195757 TG---GT-GGGTGACCCTGGGA-TGGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533836 24 - 578057 TG---GT-ATGTGACCCTGGGA-CGGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793119 24 - 92844088 TG---GT-GGGTGACCCTGGGC-TGGCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458493 24 + 96509753 TG---GT-ATGTGACCCTGGGC-TGGTCA i macFas5.chr10 I 404 C 0 s macNem1.NW_012014244v1 16930174 24 - 16982598 TG---GT-ATGTGACCCTGGGC-TGGCCG i macNem1.NW_012014244v1 I 9 C 0 s cerAty1.NW_012001373v1 3730641 24 - 3785965 TG---GT-GGGTGGCCCTGGGT-TGGCCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322468 24 - 90373283 TG---GT-GGGTGACCCAGGGC-TGGTCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122615 24 - 179258 TG---GT-ATGTGACTCTGGGC-TGGCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598324 24 - 5823884 TA---GT-ATGTGACCCTGGGA-TGGTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79513 25 + 372756 TG---GC-ATGTGACCCTGGGATTGATCA i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314738 62 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=25184.000000 s hg38.chr20_KI270870v1_alt 144785 6 + 183433 TGGTGG s panTro5.chr20 66480160 6 + 66533130 TGAGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148022 6 + 62195757 TGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533860 6 - 578057 TGGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793143 6 - 92844088 TGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458517 6 + 96509753 TGGTGT i macFas5.chr10 C 0 I 310 s macNem1.NW_012014244v1 16930198 6 - 16982598 TGGTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730665 6 - 3785965 TGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322492 6 - 90373283 TGGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122639 6 - 179258 TGGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598348 6 - 5823884 TGGTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79538 6 + 372756 TGGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314676 6 + 16356641 TGGTGT i saiBol1.JH378156 T 62 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=65583.000000 s hg38.chr20_KI270870v1_alt 144791 10 + 183433 GTGACCCTGG s panTro5.chr20 66480166 10 + 66533130 GTGACCCTGG i panTro5.chr20 C 0 I 81 s panPan2.chr20 62148028 10 + 62195757 GTGACCCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533866 10 - 578057 GTGACCCGGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793149 10 - 92844088 GTGACCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458833 10 + 96509753 GTGACCCTGG i macFas5.chr10 I 310 C 0 s macNem1.NW_012014244v1 16930204 10 - 16982598 GTGACCCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730671 10 - 3785965 ATGACCCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322498 10 - 90373283 ATGACCCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122645 10 - 179258 GTGACCCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598354 10 - 5823884 GTGACCCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79544 10 + 372756 GTGACCCTTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314682 10 + 16356641 GTGACCCTCG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=28117.000000 s hg38.chr20_KI270870v1_alt 144801 5 + 183433 GCTGG s panPan2.chr20 62148038 5 + 62195757 GCTGG i panPan2.chr20 C 0 T 48 s gorGor5.CYUI01015848v1 533876 5 - 578057 GCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793159 5 - 92844088 GCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458843 5 + 96509753 GCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930214 5 - 16982598 GCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730681 5 - 3785965 GCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322508 5 - 90373283 GCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122655 5 - 179258 GCTGG i manLeu1.NW_012101652v1 C 0 T 52 s colAng1.NW_012114444v1 5598364 5 - 5823884 GCTGG i colAng1.NW_012114444v1 C 0 T 48 s calJac3.chrUn_GL286459 79554 5 + 372756 TCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314692 5 + 16356641 TCTGG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=81684.000000 s hg38.chr20_KI270870v1_alt 144806 20 + 183433 CTGTGGTGGGTGACCCTGGG s panPan2.chr20 62147995 20 + 62195757 CCGTGGTGGGTGACCCTGGG i panPan2.chr20 T 48 C 0 s gorGor5.CYUI01015848v1 533881 20 - 578057 CCATGGTGGGTGACCCTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793164 20 - 92844088 CTGTGGTGGGTGACCCTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458848 20 + 96509753 CTGTGGTATGTGACCCTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930219 20 - 16982598 CCGTGGTGGATGACCCTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730686 20 - 3785965 CTGTGGTATGTGACCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322513 20 - 90373283 CCGTGGCAGGTGACCCTGGG i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5598321 20 - 5823884 CCGTAGTATGTGACCCTGGG i colAng1.NW_012114444v1 T 48 C 0 s calJac3.chrUn_GL286459 79559 20 + 372756 CTCTGGTAGGTGACCCTGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314697 20 + 16356641 CCCTGGTAGGTGACCCTGGA i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e manLeu1.NW_012101652v1 122660 52 - 179258 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=93599.000000 s hg38.chr20_KI270870v1_alt 144826 20 + 183433 ATGGCTGTGGTGGGTGACCC s panPan2.chr20 62148015 20 + 62195757 ATGGTCATGGTGGGTGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533901 20 - 578057 CTGGCCGTGGTGGGTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793184 20 - 92844088 CTGGTCATGGTAGGTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458868 20 + 96509753 CTGGCCGTGGTGGGTGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930239 20 - 16982598 CTGGCCGTGGTATGTGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730706 20 - 3785965 CTGGCCGTGGTGGGTGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322533 20 - 90373283 CTGGCCGTGGTATGTGACTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122608 20 - 179258 CTGGCCGTGGTATGTGACTC i manLeu1.NW_012101652v1 T 52 C 0 s colAng1.NW_012114444v1 5598341 20 - 5823884 ATGGTCATGGTGAGTGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79579 20 + 372756 CTGGCTCTGGTGTGTGACCC i calJac3.chrUn_GL286459 C 0 T 135 s saiBol1.JH378156 16314717 20 + 16356641 CTGGCTCTGGTGTGTGACCC i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=15467.000000 s hg38.chr20_KI270870v1_alt 144846 4 + 183433 TGGG s panPan2.chr20 62148035 4 + 62195757 TGGG i panPan2.chr20 C 0 T 72 s gorGor5.CYUI01015848v1 533921 4 - 578057 TGAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793204 4 - 92844088 TGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458888 4 + 96509753 TGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930259 4 - 16982598 TGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730726 4 - 3785965 TGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322553 4 - 90373283 TGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122628 4 - 179258 TGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598361 4 - 5823884 TGGG i colAng1.NW_012114444v1 C 0 T 160 s saiBol1.JH378156 16314737 4 + 16356641 TACA i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=6669.000000 s hg38.chr20_KI270870v1_alt 144850 2 + 183433 AT s panPan2.chr20 62147967 2 + 62195757 CT i panPan2.chr20 T 72 C 0 s gorGor5.CYUI01015848v1 533925 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793208 2 - 92844088 CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458892 2 + 96509753 CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930263 2 - 16982598 CT i macNem1.NW_012014244v1 C 0 T 85 s cerAty1.NW_012001373v1 3730730 2 - 3785965 CT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322557 2 - 90373283 CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122632 2 - 179258 CT i manLeu1.NW_012101652v1 C 0 C 0 s saiBol1.JH378156 16314741 2 + 16356641 CT i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598365 160 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=21726.000000 s hg38.chr20_KI270870v1_alt 144852 11 + 183433 GGCGGTGGTGG------- s panPan2.chr20 62147969 11 + 62195757 GGCCGTGGTGG------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533927 11 - 578057 GGCCATGGTGG------- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793210 11 - 92844088 GGCCGTGGTGG------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458894 11 + 96509753 GGCCGTGGTGG------- i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730732 11 - 3785965 GGCCGTGGTGG------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322559 11 - 90373283 GGCCGTGGTAT------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122634 11 - 179258 GGCCGTGGTGG------- i manLeu1.NW_012101652v1 C 0 T 216 s saiBol1.JH378156 16314743 12 + 16356641 ------GGTGAATGATAT i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598365 160 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e macNem1.NW_012014244v1 16930265 85 - 16982598 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=23832.000000 s hg38.chr20_KI270870v1_alt 144863 6 + 183433 GTGACC s panPan2.chr20 62147980 6 + 62195757 GTGACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533938 6 - 578057 GTGACC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793221 6 - 92844088 ATGACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458905 6 + 96509753 GTGACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930180 6 - 16982598 GTGACC i macNem1.NW_012014244v1 T 85 C 0 s cerAty1.NW_012001373v1 3730743 6 - 3785965 GTGACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322570 6 - 90373283 GTGACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122429 6 - 179258 GTGACC i manLeu1.NW_012101652v1 T 216 C 0 s saiBol1.JH378156 16314755 6 + 16356641 GTGACC i saiBol1.JH378156 C 0 T 116 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598365 160 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=17367.000000 s hg38.chr20_KI270870v1_alt 144869 6 + 183433 CGGGGC s panPan2.chr20 62147986 6 + 62195757 CTGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 533944 6 - 578057 CGGGGC i gorGor5.CYUI01015848v1 C 0 I 72 s rheMac8.chr10 92793227 6 - 92844088 CTGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458911 6 + 96509753 CTGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930186 6 - 16982598 CTGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730749 6 - 3785965 CTGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322576 6 - 90373283 CTGGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122435 6 - 179258 CTGGGC i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598365 160 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=5242.000000 s hg38.chr20_KI270870v1_alt 144875 7 + 183433 TGGCC------------------------------------------------GC s panPan2.chr20 62147992 7 + 62195757 TGGCC------------------------------------------------GT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534022 7 - 578057 TGGCC------------------------------------------------GC i gorGor5.CYUI01015848v1 I 72 C 0 s rheMac8.chr10 92793233 7 - 92844088 TGGCT------------------------------------------------GT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458917 55 + 96509753 TGGCCATAGTATATGACCCTGGGCTGGCCCTGGTGGGTGACCCTGGGATGTTCAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930192 7 - 16982598 TGGCC------------------------------------------------GT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730755 7 - 3785965 TGGCC------------------------------------------------AT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322582 7 - 90373283 TGGCC------------------------------------------------GT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122441 7 - 179258 TGGCC------------------------------------------------GT i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598365 160 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=22302.000000 s hg38.chr20_KI270870v1_alt 144882 7 + 183433 GGTGGGT s panPan2.chr20 62147999 7 + 62195757 GGTGGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534029 7 - 578057 GGTGGGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793240 7 - 92844088 GGTATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458972 7 + 96509753 GGTATGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930199 7 - 16982598 GGTATGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730762 7 - 3785965 GGTATGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322589 7 - 90373283 GGTGGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122448 7 - 179258 GGTGGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598205 7 - 5823884 GGTGGGT i colAng1.NW_012114444v1 T 160 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480176 81 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=72602.000000 s hg38.chr20_KI270870v1_alt 144889 15 + 183433 GACCCTGGGATGGCC s panTro5.chr20 66480257 15 + 66533130 GACCCTGGGATGGCC i panTro5.chr20 I 81 C 0 s panPan2.chr20 62148006 15 + 62195757 GACCCTGGGATGGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534036 15 - 578057 GACCCTGGGATGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793247 15 - 92844088 GACCCTGGGCTGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458979 15 + 96509753 GACCCTGGGCTGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930206 15 - 16982598 GACCCTGGGCTGGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730769 15 - 3785965 GACCCTGGGCTGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322596 15 - 90373283 GACCCTGGGCTGGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122455 15 - 179258 GACCCTGGGCTGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598212 15 - 5823884 GACCCTGGGCTGGCC i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 135 + 372756 T e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=4600.000000 s hg38.chr20_KI270870v1_alt 144904 2 + 183433 GC s panTro5.chr20 66480272 2 + 66533130 GC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148021 2 + 62195757 AT i panPan2.chr20 C 0 T 72 s gorGor5.CYUI01015848v1 534051 2 - 578057 GC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793262 2 - 92844088 GT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458994 2 + 96509753 GT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930221 2 - 16982598 GT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730784 2 - 3785965 GT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322611 2 - 90373283 TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122470 2 - 179258 GT i manLeu1.NW_012101652v1 C 0 T 24 s colAng1.NW_012114444v1 5598227 2 - 5823884 GT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79464 2 + 372756 AT i calJac3.chrUn_GL286459 T 135 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=180974.000000 s hg38.chr20_KI270870v1_alt 144906 39 + 183433 GGTGGGTGACCCTGGGCTGGCCGCG-GTGGGTGACCCTGG s panTro5.chr20 66480274 39 + 66533130 GGT-GGTGACCCTGGGATGACCGCGTGTGGTTGACCCTGG i panTro5.chr20 C 0 I 60 s panPan2.chr20 62147951 39 + 62195757 GGTGGGTGACCCTGGGCTGGCCGTG-GTGGGTGACCCTGG i panPan2.chr20 T 72 C 0 s gorGor5.CYUI01015848v1 534053 39 - 578057 GGTGGGTGACCCTGGGCTGGCCGCG-GTGGGTGACCCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793264 39 - 92844088 GGTGGGTGACCCTGGGTTGGCCGTG-GTGGATGACCCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96458996 38 + 96509753 GGTGG-TGACCCTGGGCTGGCCGTG-GTATGTGACTCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930223 39 - 16982598 GGTGGATGACCCTGGGCTGGCCGTG-GTATGTGACCCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730786 39 - 3785965 GGTGGGTGACCCTGGGTTGGCCGTG-GTGGATGACCCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322613 39 - 90373283 TGCGAGTGACCCCAGGATGTTCATG-GTGGATGACTCGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122448 39 - 179258 GGTGGGTGACCCTGGGCTGGCCGTG-GTGGGTGACCCTGG i manLeu1.NW_012101652v1 T 24 C 0 s colAng1.NW_012114444v1 5598229 39 - 5823884 GGTGGGTGACCCTGGGCTGGCTGTG-GTAGGTGACCCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79466 39 + 372756 AGTGTGTGACCCTGGACTGGTCATG-GTGTGTGACCCTGG i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=22919.000000 s hg38.chr20_KI270870v1_alt 144945 7 + 183433 GATGGCC s panPan2.chr20 62147990 7 + 62195757 GCTGGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534092 7 - 578057 GATGGCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793303 7 - 92844088 GCTGGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459034 7 + 96509753 GCTGGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930262 3 - 16982598 GCT---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730825 7 - 3785965 GCTGGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322652 7 - 90373283 GCTGGCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122487 7 - 179258 GCTGGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598268 7 - 5823884 GCTGGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79505 7 + 372756 GCTGGCC i calJac3.chrUn_GL286459 C 0 T 48 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=4547.000000 s hg38.chr20_KI270870v1_alt 144952 2 + 183433 GC s panPan2.chr20 62147997 2 + 62195757 GT i panPan2.chr20 C 0 T 48 s gorGor5.CYUI01015848v1 534099 2 - 578057 GC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793310 2 - 92844088 GT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459041 2 + 96509753 GT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3730832 2 - 3785965 GT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322659 2 - 90373283 GT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122494 2 - 179258 GT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598275 2 - 5823884 AT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79464 2 + 372756 AT i calJac3.chrUn_GL286459 T 48 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e macNem1.NW_012014244v1 16930265 0 - 16982598 C e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=79337.000000 s hg38.chr20_KI270870v1_alt 144954 20 + 183433 GGTGGGTGACCCTGGGATGG s panPan2.chr20 62147951 20 + 62195757 GGTGGGTGACCCTGGGCTGG i panPan2.chr20 T 48 C 0 s gorGor5.CYUI01015848v1 534101 20 - 578057 GGTGGGTGACCCTGGGATGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793312 20 - 92844088 GGTGGGTGACCCTGGGCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459043 20 + 96509753 GGTGGGTGACCCTGGGCTGG i macFas5.chr10 C 0 T 1671 s macNem1.NW_012014244v1 16930265 11 - 16982598 ---------CCCTGGGCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730834 20 - 3785965 GGTGGGTGACCCTGGGCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322661 20 - 90373283 GGTGGATGACCCTGGGCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122496 20 - 179258 GGTATGTGACCCTGGGCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598277 20 - 5823884 GGTGGGTGATGCTGGACTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79466 20 + 372756 AGTGTGTGACCCTGGACTGG i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=87508.000000 s hg38.chr20_KI270870v1_alt 144974 21 + 183433 CCGTGGTGGGTGACCCTGGGC s panPan2.chr20 62147971 21 + 62195757 CCGTGGTGGGTGACCCTGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534121 21 - 578057 TCGCGGTGGGTGACCCTGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793332 21 - 92844088 CTGTGGTATGTGACCCTGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457392 21 + 96509753 CCGTGGTATGTGACCCTGGGC i macFas5.chr10 T 1671 C 0 s macNem1.NW_012014244v1 16930276 21 - 16982598 CCGTGGTATGTGACCCTGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730854 21 - 3785965 CCATAGTATATGACCCTGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322681 21 - 90373283 CCATAGTATATGACCCTGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122516 21 - 179258 CCGTGGTGGGTGACCCTGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598297 21 - 5823884 CCGTGGTGGGTGACCCTGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79486 21 + 372756 TCATGGTGTGTGACCCTGGGC i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e saiBol1.JH378156 16314761 116 + 16356641 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=184398.000000 s hg38.chr20_KI270870v1_alt 144995 48 + 183433 TG----------------------------------------------------------------------GCCGTGGTGGGTGACCCTGGGA-TGGTCGTGGTGGGTGACCCGGGGC s panPan2.chr20 62147992 48 + 62195757 TG----------------------------------------------------------------------GCCGTGGTGGGTGACCCTGGGA-TGGTCATGGTGGGTGACCCTGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534142 48 - 578057 TG----------------------------------------------------------------------GCCGCGGTGGGTGACCCTGGGA-TGGTTGTGGTGGGTGACCCTGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793353 48 - 92844088 TG----------------------------------------------------------------------GCCGTGGTGGATGACCCTGGGC-TGGCCGTGGTGGGTGACCCTGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457413 118 + 96509753 TGGTCATGGTGTCTGACCCCAAACTAGTCGTGGTGACCCCTAGACTATCCCATAGTGTGTGACCCTGGCCTTGTCATGGTGGGTGACCCAGGGC-TGGTCGTGGTGGGTGACCCTGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930297 48 - 16982598 TG----------------------------------------------------------------------GCCGTGGTGGGTGACCCTGGGC-TGGCCGTGGTGGGTGACCCTGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730875 48 - 3785965 TG----------------------------------------------------------------------GCCCTGGTGGGTGACCCTGGGA-TGTTCATGGTATGTGACCCTGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322702 48 - 90373283 TG----------------------------------------------------------------------GTCATGGTGGGTGACCCTGGGC-TGGTCTTTGCGGGTGGCCCTGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122537 48 - 179258 TG----------------------------------------------------------------------GCCGTGGTGGGTGACCCTGGGC-TGGCCGTGGTATGTGACTCTGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598318 48 - 5823884 TG----------------------------------------------------------------------GCCGTAGTATGTGACCCTGGGA-TGGTCATGGTGAGTGACCCTGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79507 49 + 372756 TG----------------------------------------------------------------------GCCCTGGCATGTGACCCTGGGATTGATCATGGTGTGTGACCCTTGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314645 49 + 16356641 TA----------------------------------------------------------------------ACCATAGTATGTGACCCCGGGATTGATGATGGTGTGTGACCCTCGTC i saiBol1.JH378156 T 116 T 24 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=17765.000000 s hg38.chr20_KI270870v1_alt 145043 3 + 183433 TGG s panPan2.chr20 62148040 3 + 62195757 TGG i panPan2.chr20 C 0 T 39 s gorGor5.CYUI01015848v1 534190 3 - 578057 TGG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793401 3 - 92844088 TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457531 3 + 96509753 TGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930345 3 - 16982598 TGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730923 3 - 3785965 TGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322750 3 - 90373283 TGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122585 3 - 179258 TGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598366 3 - 5823884 TGG i colAng1.NW_012114444v1 C 0 T 63 s calJac3.chrUn_GL286459 79556 3 + 372756 TGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314670 3 + 16356641 TGA i saiBol1.JH378156 T 24 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=16862.000000 s hg38.chr20_KI270870v1_alt 145046 8 + 183433 CCGTGGTA s gorGor5.CYUI01015848v1 534193 8 - 578057 TCGTGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793404 8 - 92844088 CCATAGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96457534 8 + 96509753 CCGTGGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930348 8 - 16982598 CCGTGGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730926 8 - 3785965 CCATGGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322753 8 - 90373283 TCTTTGCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122588 8 - 179258 CCGTGGTG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 79559 8 + 372756 CTCTGGTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314673 8 + 16356641 TGATGGTG i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598369 63 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 39 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T e otoGar3.GL873542 22879157 58 + 22939663 T a score=-546.000000 s hg38.chr20_KI270870v1_alt 145054 1 + 183433 T s gorGor5.CYUI01015848v1 534201 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793412 1 - 92844088 T i rheMac8.chr10 C 0 I 71 s macFas5.chr10 96457542 1 + 96509753 G i macFas5.chr10 C 0 I 1457 s macNem1.NW_012014244v1 16930356 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730934 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322761 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122596 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 79567 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314681 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879099 1 + 22939663 T i otoGar3.GL873542 T 58 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e colAng1.NW_012114444v1 5598369 63 - 5823884 T e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 39 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=42130.000000 s hg38.chr20_KI270870v1_alt 145055 7 + 183433 GTGACCC s gorGor5.CYUI01015848v1 534202 7 - 578057 GTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793484 7 - 92844088 GTGACCC i rheMac8.chr10 I 71 C 0 s macFas5.chr10 96459000 7 + 96509753 GTGACCC i macFas5.chr10 I 1457 C 0 s macNem1.NW_012014244v1 16930357 7 - 16982598 GTGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730935 7 - 3785965 GTGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322762 7 - 90373283 GTGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122597 7 - 179258 GTGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598306 7 - 5823884 GTGACCC i colAng1.NW_012114444v1 T 63 C 0 s calJac3.chrUn_GL286459 79568 7 + 372756 GTGACCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314682 7 + 16356641 GTGACCC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879100 7 + 22939663 ATGACCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e mm10.chr2 181821848 0 + 182113224 C e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 39 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=33832.000000 s hg38.chr20_KI270870v1_alt 145062 7 + 183433 TGGGCTG s gorGor5.CYUI01015848v1 534209 7 - 578057 GGGGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793491 7 - 92844088 TGGGCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459007 7 + 96509753 TGGGCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930364 7 - 16982598 TGGGCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730942 7 - 3785965 TGCGCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322769 7 - 90373283 TGGGCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122604 7 - 179258 TGGGCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598313 7 - 5823884 TGGGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79575 7 + 372756 TGGACTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314689 7 + 16356641 TCGTCTG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879107 7 + 22939663 TGGGCTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821848 7 + 182113224 TGGTATA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e canFam3.chr24 47633901 512 + 47698779 I e micMur3.chr18 56896117 4179 + 57149010 I e dasNov3.JH569290 272069 437 - 397369 I e panPan2.chr20 62148043 39 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=55453.000000 s hg38.chr20_KI270870v1_alt 145069 9 + 183433 GCCGTGGTA s gorGor5.CYUI01015848v1 534216 9 - 578057 GCCGTGGTA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793498 9 - 92844088 GCCGTGGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459014 9 + 96509753 GCCGTGGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930371 9 - 16982598 GCCGTGGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730949 9 - 3785965 GCCGTGGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322776 9 - 90373283 GCCGTGGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122611 9 - 179258 GCCGTGGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598320 9 - 5823884 GCCGTAGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79582 9 + 372756 GCTCTGGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314696 9 + 16356641 GCCCTGGTA i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22879114 9 + 22939663 GCCATGCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821855 9 + 182113224 GTCCTGATG i mm10.chr2 C 0 C 0 s canFam3.chr24 47634413 9 + 47698779 gctgcgaTG i canFam3.chr24 I 512 C 0 s dasNov3.JH569290 272506 9 - 397369 GCCAGGGCG i dasNov3.JH569290 I 437 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e micMur3.chr18 56896117 4179 + 57149010 I e panPan2.chr20 62148043 39 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e aotNan1.NW_018500483v1 2715284 41 + 11732439 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=-215.000000 s hg38.chr20_KI270870v1_alt 145078 1 + 183433 -T s gorGor5.CYUI01015848v1 534225 1 - 578057 -T i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793507 1 - 92844088 -T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459023 1 + 96509753 -T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930380 1 - 16982598 -T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730958 1 - 3785965 -T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322785 1 - 90373283 -T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122620 1 - 179258 -T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598329 1 - 5823884 -T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79591 1 + 372756 -T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314705 1 + 16356641 -G i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2715325 1 + 11732439 -T i aotNan1.NW_018500483v1 I 41 C 0 s otoGar3.GL873542 22879123 1 + 22939663 -T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821864 1 + 182113224 -T i mm10.chr2 C 0 C 0 s canFam3.chr24 47634422 1 + 47698779 -T i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 272515 1 - 397369 A- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e micMur3.chr18 56896117 4179 + 57149010 I e panPan2.chr20 62148043 39 + 62195757 T e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=49624.000000 s hg38.chr20_KI270870v1_alt 145079 7 + 183433 GTGACCC-- s panPan2.chr20 62148004 7 + 62195757 GTGACCC-- i panPan2.chr20 T 39 C 0 s gorGor5.CYUI01015848v1 534226 7 - 578057 GTGACCC-- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793508 7 - 92844088 GTGACTC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459024 7 + 96509753 GTGACTC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930381 7 - 16982598 GTGACTC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730959 7 - 3785965 GTGACTC-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322786 7 - 90373283 GTGACTC-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122621 7 - 179258 GTGACTC-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598330 7 - 5823884 GTGACCC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79592 7 + 372756 GTGACCC-- i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16314706 7 + 16356641 GTGACCC-- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2715326 7 + 11732439 GTGACCC-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22879124 7 + 22939663 CTGACCC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821865 7 + 182113224 GAGATCC-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47634423 7 + 47698779 ATCATCG-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 272516 7 - 397369 --GTCCCCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e micMur3.chr18 56896117 4179 + 57149010 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=22877.000000 s hg38.chr20_KI270870v1_alt 145086 5 + 183433 -TGGGA s panPan2.chr20 62148011 5 + 62195757 -TGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534233 5 - 578057 -TGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92793515 5 - 92844088 -TGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459031 5 + 96509753 -TGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930388 5 - 16982598 -TGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730966 5 - 3785965 -TGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322793 5 - 90373283 -TGGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122628 5 - 179258 -TGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598337 5 - 5823884 -TGGGA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16314713 5 + 16356641 -TGGAC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2715333 5 + 11732439 -TGGGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22879131 5 + 22939663 -TGCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821872 5 + 182113224 -TGGAC i mm10.chr2 C 0 I 1 s canFam3.chr24 47634430 5 + 47698779 -TGGAT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 272523 5 - 397369 GAGGA- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e micMur3.chr18 56896117 4179 + 57149010 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 1 + 372756 I e panTro5.chr20 66480313 60 + 66533130 I e nomLeu3.chr13 110055918 27 - 110113093 T a score=29230.000000 s hg38.chr20_KI270870v1_alt 145091 4 + 183433 TGGT s panPan2.chr20 62148016 4 + 62195757 TGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534238 4 - 578057 TGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055891 4 - 110113093 TGGT i nomLeu3.chr13 T 27 C 0 s rheMac8.chr10 92793520 4 - 92844088 TGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459036 4 + 96509753 TGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930393 4 - 16982598 TGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730971 4 - 3785965 TGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322798 4 - 90373283 TGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122633 4 - 179258 TGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598342 4 - 5823884 TGGT i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16314718 4 + 16356641 TGGC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2715338 4 + 11732439 TGGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22879136 4 + 22939663 TGGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821878 3 + 182113224 TGC- i mm10.chr2 I 1 C 0 s canFam3.chr24 47634435 4 + 47698779 TGGC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 272528 4 - 397369 TTGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e micMur3.chr18 56896117 4179 + 57149010 I e cebCap1.NW_016107870v1 1183556 0 + 1231380 C e calJac3.chrUn_GL286459 79599 1 + 372756 I e panTro5.chr20 66480313 60 + 66533130 I a score=-1492.000000 s hg38.chr20_KI270870v1_alt 145095 2 + 183433 CG s panPan2.chr20 62148020 2 + 62195757 CA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534242 2 - 578057 CG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055895 2 - 110113093 CA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793524 2 - 92844088 CG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459040 2 + 96509753 CG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930397 2 - 16982598 CA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730975 2 - 3785965 CG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322802 2 - 90373283 CG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122637 2 - 179258 CG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598346 2 - 5823884 CA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16314722 2 + 16356641 TC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183556 2 + 1231380 TC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715342 2 + 11732439 TC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22879140 2 + 22939663 CA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821881 2 + 182113224 CT i mm10.chr2 C 0 C 0 s canFam3.chr24 47634440 1 + 47698779 C- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 272532 2 - 397369 CG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e micMur3.chr18 56896117 4179 + 57149010 I e calJac3.chrUn_GL286459 79599 1 + 372756 I e panTro5.chr20 66480313 60 + 66533130 I a score=45365.000000 s hg38.chr20_KI270870v1_alt 145097 6 + 183433 TGGTGG s panPan2.chr20 62148022 6 + 62195757 TGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534244 6 - 578057 TGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055897 6 - 110113093 TGGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793526 6 - 92844088 TGGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459042 6 + 96509753 TGGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930399 6 - 16982598 TGGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730977 6 - 3785965 TGGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322804 6 - 90373283 TGGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122639 6 - 179258 TGGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598348 6 - 5823884 TGGTGA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16314724 6 + 16356641 TGGTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183558 6 + 1231380 TGGTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715344 6 + 11732439 TGGCGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56900296 6 + 57149010 TGGTGT i micMur3.chr18 I 4179 C 0 s otoGar3.GL873542 22879142 6 + 22939663 CAGTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821883 4 + 182113224 --ATGC i mm10.chr2 C 0 I 3 s canFam3.chr24 47634441 5 + 47698779 -TGTGT i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 272534 2 - 397369 -GG--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1890522 770 - 2029793 I e calJac3.chrUn_GL286459 79599 1 + 372756 I e panTro5.chr20 66480313 60 + 66533130 I a score=85669.000000 s hg38.chr20_KI270870v1_alt 145103 7 + 183433 --GTGACCC s panPan2.chr20 62148028 7 + 62195757 --GTGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534250 7 - 578057 --GTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055903 7 - 110113093 --GTGACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793532 7 - 92844088 --GTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459048 7 + 96509753 --GTGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930405 7 - 16982598 --GTGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730983 7 - 3785965 --GTGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322810 7 - 90373283 --GTGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122645 7 - 179258 --GTGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598354 7 - 5823884 --GTGACCC i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16314730 7 + 16356641 --GTGACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183564 7 + 1231380 --GTGACCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715350 7 + 11732439 --GTGACCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56900302 7 + 57149010 --GTGAGCC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1891292 7 - 2029793 --GTGACCC i proCoq1.NW_012150197v1 I 770 C 0 s otoGar3.GL873542 22879148 7 + 22939663 --GGGACCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821890 6 + 182113224 --ATGTCC- i mm10.chr2 I 3 C 0 s canFam3.chr24 47634448 7 + 47698779 --GTGACCT i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 272536 7 - 397369 GGGAGAC-- i dasNov3.JH569290 C 0 C 0 e calJac3.chrUn_GL286459 79599 1 + 372756 I e panTro5.chr20 66480313 60 + 66533130 I a score=8090.000000 s hg38.chr20_KI270870v1_alt 145110 1 + 183433 -T s panPan2.chr20 62148035 1 + 62195757 -T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534257 1 - 578057 -T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055910 1 - 110113093 -T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793539 1 - 92844088 -T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459055 1 + 96509753 -T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930412 1 - 16982598 -T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730990 1 - 3785965 -T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322817 1 - 90373283 -T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122652 1 - 179258 -T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598361 1 - 5823884 -T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79600 1 + 372756 -T i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16314737 1 + 16356641 -T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183571 1 + 1231380 -T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715357 1 + 11732439 -T i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56900309 1 + 57149010 -T i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1891299 1 - 2029793 -T i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22879155 1 + 22939663 -T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821896 1 + 182113224 -T i mm10.chr2 C 0 C 0 s canFam3.chr24 47634455 1 + 47698779 -T i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 272543 1 - 397369 A- i dasNov3.JH569290 C 0 C 0 e panTro5.chr20 66480313 60 + 66533130 I a score=2432010.000000 s hg38.chr20_KI270870v1_alt 145111 131 + 183433 GGGCTGGTGAATGATATGTGGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACCTTTGCTGGAAAGAAGGGAAAACTGTCAGGGGATGAGGTCCTCAGTCCAAAGTTCAAGACTAGCGACGGTAAG s panTro5.chr20 66480373 131 + 66533130 GGGCTGGTGAATGATATGTGGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACCTTTGCTGGAAAGAAGGGAAAACTGTCAGGGGATGAGGCCCTCAGTCCGAAGTTCAAGACTAGCGACGGTAAG i panTro5.chr20 I 60 C 0 s panPan2.chr20 62148036 131 + 62195757 GGGCTGGTGAATGATATGTGGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACCTTTGCTGGAAAGAAGGGAAAACTGTCAGGGGATGAGGCCCTCAGTCCGAAGTTCAAGACTAGCGACGGTAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534258 131 - 578057 GGGCTGGTGAATGATATGTGGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACCTTTGCTGGAAAGAAGGGAAAACTGTCAGGGGATGAGGTCCTCAGTCCAAAGTTCAAGACTAGCGACGGTAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110055911 131 - 110113093 GGGCTGGTGAATGATATGTGGCCTCTGTTTCCAGTTTGTCAGGCTGTCCCAGAGCAACCTTTGCTGGAAAGAAGGGAAAACTGTCAGGGGATGAGGTCCTCAGTCCGAAGTTCAAGACTAGCGACGGTAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793540 131 - 92844088 GGGCTGGTGAATGATATGTAGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTCTCAGGGGATGAGGTCCTCAGTCCAAAATTCAAGACTAGCGATGGTAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459056 131 + 96509753 GGGCTGGTGAATGATATGTAGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTCTCAGGGGATGAGGTCCTCAGTCCAAAATTCAAGACTAGCGATGGTAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930413 131 - 16982598 GGGCTGGTGAATGATATGTAGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTCTCAGGGGATGAGGTCCTCAGTCCAAAATTCAAGACTAGTGATGGTAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3730991 131 - 3785965 GGGCTGGTGAATGATATGTGGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTCTCAGGGGATGAGGTCCTCAGTCCAAAATTCAAGACTAGCGATGGTAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322818 131 - 90373283 GGGCTGGTGAATGATATGTGGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTCTCAGGGGATGAGGTCCTCAGTCCAAAATTCAAGACTAGCGATGGTAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122653 131 - 179258 GGGCTGGTGAATGATATGTGGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTCTCAGGGGATGAGGTCCTCAGTCCAAAATTCAAGACTAGCGATGGTAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598362 131 - 5823884 GGGCTGGTGAATGATATGTGGCCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTCTCAGGGGACGAGGTCCTCAGTCCAAAATTCAAGACTAGCGATGGTAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79601 131 + 372756 ACACTGGTGAATGATATGTGACCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTGTCAGGGGATGAGGTCCTCACCCCAAAGTTCAAGACTAGCGATGGTAAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314738 131 + 16356641 ACACTGGTGAATGATATGTGACCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTGTCAGGGGATGAGGTCCTCACCCCAAAGTTCAAGACTAGCGATGGTAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183572 131 + 1231380 ACACTGGTGAATGATATATGACCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTGTCAGGGGATGAGGTCCTCACCCCAAAGTTCAAGACCAGCGACGGTAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715358 131 + 11732439 GGACGGGTGAATGATATGTGACCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTGTCAGGGGATGAGGTCCTCACCCCAAAGTTCAAGACTAGCGATGGTAAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56900310 130 + 57149010 GCACTGGTCAATGATATGTGACCTCT-CTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGGAAGAAGGGAAAACTCTCAGGGGAAGAGGTTCTCAGCCCAAAGTTCAAGACCAGTGACGGTAAG i micMur3.chr18 C 0 I 279 s proCoq1.NW_012150197v1 1891300 131 - 2029793 GCACTGGTCAATGATGTGTGACCTCTGCTTCCAGTTTGTCAGGCTGTCCCAGAGCAACATTTGCTGGAAAGAAGGGAAAACTCTCAGGGGAAGAGGTTCTCAGCCCAAAGTTCAAGACCAGCGACGGTAAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22879156 131 + 22939663 GTCTTGGTCAATGATATGGGACCTCTCCTTCCAGTCTGTCAGGCTGTCCTAGAGCAACATTTGCTGGAAAGAAGGGAAAACTCTCAGGGGAAGAGGTTCTCAGCTCAAAGTTCAAGACTAGTGACGGTAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181821897 131 + 182113224 GAACTGGTCAGTGATGTATAACTTCTGCTTCTAGTTTGTCTGGCTGTCCCAGAGCAACCTTTGCTGGAAAGAAAGGAAAACTCTCAGGGGATGAGATTCTCAGCCCAAAGTTCAAGACAAGTGATGGTGAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47634456 131 + 47698779 GAGCTGGTTTTTTGTGCATGACCTTTGCTTCCAGCTTATCTGGCTGTCCCAGAGCAACCTTTGCTGGAAAGAAGGGAAAAGTCTCAGGGGATGAGGTTCTCAGCACCAAGTTCAAGACAAGTGATGGTAAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 272544 131 - 397369 GGACTGTTTTCTAATGCCGGTCTTTCTCTTCCAGCTTGTCAGGCTGTCCCAGAGCGACTTTTGCTGGAAAGAAGGGAAAACTCTCAGGGGATGAAATTCTCAGCACCAAGTTCAAGACGAGTGATGGTAAA i dasNov3.JH569290 C 0 C 0 a score=49291.000000 s hg38.chr20_KI270870v1_alt 145242 4 + 183433 GATG s panTro5.chr20 66480504 4 + 66533130 GATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148167 4 + 62195757 GATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534389 4 - 578057 GATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056042 4 - 110113093 GATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793671 4 - 92844088 CATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459187 4 + 96509753 CATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930544 4 - 16982598 CATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731122 4 - 3785965 GATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322949 4 - 90373283 GATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122784 4 - 179258 GATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598493 4 - 5823884 GACG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79732 4 + 372756 GATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314869 4 + 16356641 GATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183703 4 + 1231380 GATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715489 4 + 11732439 GATG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1891431 4 - 2029793 AATT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22879287 4 + 22939663 AATG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822028 4 + 182113224 GATG i mm10.chr2 C 0 C 0 s dasNov3.JH569290 272675 4 - 397369 AATG i dasNov3.JH569290 C 0 I 65 e canFam3.chr24 47634587 0 + 47698779 C e micMur3.chr18 56900440 279 + 57149010 I a score=3122801.000000 s hg38.chr20_KI270870v1_alt 145246 276 + 183433 ----GCTTCCTGGATTTC--CCTGCTCATGGCTGGGTGCCAGGGTAAGTGAGAGCTGTGCACC-TTTT-GTGCTGGTGGGAAGAAGGTTAGGGAGATGAAGCCCCTCCTGGAATGAGTCACGGCAGAGGCAGATCCCTTCACCTAAGCTGACAGCCTTTCGGACCTTGGCTCTGAAGCTCTTGACACCTGT-GTC-----TGGGGTCCCTGGCCCTGAGGAGGTCATGCCTGCTGTAACCTGCGGCTTTGGTGACCACTGGGATCAGAGTC------------CAGTGGAGCCCATGTGCTG s panTro5.chr20 66480508 275 + 66533130 ----GCTTCCTGGATTTC--CCTGCTCATGGCTGGGTGCCCGGGTAAGTGAGAGCTGTGCACC-TTTT-GTGCTGGTGGGAAGAAGGT-AGGGAGATGAAGCCCCTCCTGGAATGAGTCACGGCAGAGGCAGATCCCTTCACCTAAGCTGACAGCCTTTCGGACCTTGGCTCTGAAGCTCTTGACACCTGT-GTC-----TGGGGTCCCTGGCCCTGAGGAGGTCATGCCTGCTGTAACCTGCGGCTTTGGTGGCCACTGGGATCAGAGTC------------CAGTGGAGCCCATGTGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148171 275 + 62195757 ----GCTTCCTGGATTTC--CCTGCTCATGGCTGGGTGCCCGGGTAAGTGAGAGCTGTGCACC-TTTT-GTGCTGGTGGGAAGAAGGT-AGGGAGATGAAGCACCTCCTGGAATGAGTCACGGCAGAGGCAGATCCCTTCACCTAAGCTGACAGCCTTTCGGACCTTGGCTCTGAAGCTCTTGACACCTGT-GTC-----TGGGGTCCCTGGCCCTGAGGAGGTCATGCCTGCTGTAACCTGCGGCTTTGGTGGCCACTGGGATCAGAGTC------------CAGTGGAGCCCATGTGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534393 275 - 578057 ----GCTTCCTGGATTTC--CCTGCTCATGGCTGGGTGCCCGGGTGAGTGAGAGCTGTGCACC-TTTT-GTGCTGGTGGGAAGAAGGT-AGAGAGATGAAGCCCCTCCTGGAATGAGTCACGGCAGAGGCAGATCCCTTCACCTAAGCTGACAGCCTTTCGGGCCTTGGCTCTGAAGCTCTTGACACCTGT-GTC-----TGGGGTCCCTGGCCCTCAGGAGGTCATGCCTGCTGTAACCTGCGGCTTTGGTGACCACTGGGATCAGAGTC------------CAGTGGAGCCCATGTGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056046 276 - 110113093 ----GCTTCCTGGATTTC--CCTGCTCATGGCTGGGTGCCCGGGTGAGTGAGAGCTGCGTACCTTTTT-GTGCTGGTGGGAAGAAGGT-AGAGAGGTGAAGCCCCTCCTGGAATGAGTCATGGCAGAGGCAGATCCCTTCACCTAAGCTGACAGCCTTTCGGACGTTGGCTCTGAAGCTCTTGACACCTGT-GTC-----TGGGGGCCCTGGCCCTCAGGAGCTCATGCCTGCTGTAACCTGTGGCTTTGGTGACCACTGGGATCAGAGTC------------CAGTGGAGCCCATGTGCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793675 271 - 92844088 ----GCTTCCTGAATTTC--CCTGCTCATGACTGGGTGCCCGGGTGAGAGAGAGCTGTGCACC-TTTT-----TGGTGGGAAGAAGGC-AGAGAGATGAAGCCCCTCCTGGAATGAGTCATGGCAGAGGCAGATCCCTTGACCTGAGCTGACAGCCTTTTGGACCTTGGCTCTGCAGCTCTTGACACCTGT-GTC-----TGGGGCCCCTGGCCCTCAGGAGGTCATGCCTGCTGTAACCTGTGGCTTTGGTGACCACTGGGATCAGAGTC------------CAGTGGAGCCCACGTGCTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459191 271 + 96509753 ----GCTTCCTGAATTTC--CCTGCTCATGACTGGGTGCCCGGGTGAGAGAGAGTTGTGCACC-TTTT-----TGGTGGGAAGAAGGC-AGAGAGATGAAGCCCCTCCTGGAATGAGTCATGGCAGAGGCAGATCCCTTGACCTGAGCTGACAGCCTTTTGGACCTTGGCTCTGCAGCTCTTGACACCTGT-GTC-----TGGGGCCCCTGGCCCTCAGGAGGTCATGCCTGCTGTAACCTGTGGCTTTGGTGACCACTGGGATCAGAGTC------------CAGTGGAGCCCACGTGCTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930548 271 - 16982598 ----GCTTCCTGAATTTC--CCTGCTCATGACTGGGTGCCCGGGTGAGAGAGAGCTGTGCACC-TTTT-----TGGTGGGAAGAAGGC-AGAGAGATGAAGCCCCTCCTGGAATGAGTCATGGCAGAGGCAGATCCCTTGACCTGAGCTGACAGCCTTTTGGACCTTGGCTCTGCAGCTCTTGACACCTGT-GTC-----TGGGGCCCCTGGCCCTCAGGAGGTCATGCCTGCTGTAACCTGTGGCTTTGGTGACCACTGGGATCAGAGTC------------CAGTGGAGCCCACGTGCTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731126 271 - 3785965 ----GCTTCCTGAATTTC--CCTGCTCATGACTGGGTGCCCGGGTGAGAGAGAGCTGTGCACC-TTTT-----TGGTGGGAAGAAGGC-AGAGAGATGAAGCCCCTCCTGGAATGAGTCATGGCAGAGGCAGATCCCTTGACCTGAGCTGACAGCCTTTTGGACCTTGGCTCTGCAGCTCTTGACACCTGT-GTC-----TGGGGCCCCTGGCCCTCAGGAGGTCATGCCTGCTGTAACCTGTGGCTTTGGTGACCACTGGGATCAGAGTC------------CAGTGGAGCCCACGTGCTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90322953 271 - 90373283 ----GCTTCCTGAATTTC--CCTGCTCATGACTGGGTGCCCGGGTGAGAGAGAGCTGTGCACC-TTTT-----TGGTGGGAAGATGGC-AGAGAGATGAAGCCCCTCCTGGAATGAGTCATGGCAGAGGCAGATCCCTTGACCTGAGCTGACAGCCTTTTGGACCTTGGCTCTGCAGCTCTTGACACCTGT-GTC-----TGGGGCCCCTGGCCCTCAGGAGGTCATGCCTGCTGTAACCTGTGGCTTTGGTGACCACTGGGATCAGAGTC------------CAGTGGAGCCCACGTGCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 122788 271 - 179258 ----GCTTCCTGAATTTC--CCTGCTCATGACTGGGTGCCCGGGTGAGAGAGAGCTGTGCACC-TTTT-----TGGTGGGAAGAAGGC-AGAGAGATGAAGCCCCTCCTGGAATGAGTCATGGCAGAGGCAGATCCCTTGACCTGAGCTGACAGCCTTTTGGACCTTGGCTCTGCAGCTCTTGACACCTGT-GTC-----TGGGGCCCCTGGCCCTCAGGAGGTCATGCCTGCTGTAACCTGTGGCTTTGGTGACCACTGGAATCAGAGTC------------CAGTGGAGCCCACGTGCTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598497 270 - 5823884 ----GCTTCCTGAATTTC--CCTGCTCATGAC-GGGTGCCCGGGTGAGTGAGAGCTCTGCACC-TTTT-----TGGTGGGAAGAAGGC-AGAGAGATGAAGCCCCTCTTGGAATGAGTCATGGCAGAGGCAGATCCCTTGACCTGAGCTGACAGCCTTTTGGACCTTGGCTCTGCAGCTCTTGACACCTGT-GTC-----TGGGGCCCCTGGCCCTCCGGAGGTCATGCCTGCTGTAACCCGCGGCTTTGGCGACCACTGGGATCAGAGTC------------CAGTGGAGCCCATGTGCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 79736 267 + 372756 ----GCTTCCTGGATTTC--CCTGCTCATGACTGGGTGCC-GGGTGAGTGAGAACTGTGCACC-TTTTTGTGCTGCTGGGAAGAAGGC-AGAGAGATGAAGCCCCTCCTGGAATGA-----GGCTGAGGCAGATCCCTTGACCTGAGCTGAGAGCATTTTGGACCTTGACACTGAAGCTCTTGACACCTGT-GTC-----TGGGACCCTTGGCCCTCAAGAGATCATGACTGCACTAACATGTGGCTT---TGACCACTGGGATCAGAGTC------------CAATGGAGCCCATGTGCTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16314873 273 + 16356641 ----GCTTCCTGGATTTC--CCTGCTCATGACTGGGTGCC-GGGTGAGTGAGAGCTATGCTCC---TTTGTGCTGGTGGGAAGGAGGT-AGAGAGATGAAGCCCCTCCTGGAATGAGTCATGGCTGAGGCAGATCCCTTGACCTGAGCTGAGAGCATTTTGGACCTTGGCTCTGAAGCTCTTGACACCTGT-GTC-----TGGGGCCCTTGGCCCTTGAGAGGTCATGACTGCACTAACATGCGGCTTTGGTGACCACTGCGATCAGAGTC------------CAATGGAGCCTATGGGCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183707 275 + 1231380 ----GCTTCCTGGATTTC--CCTGCTCATGACTGGGTGCT-GGGTGAGTGAGAGCTGTGCTCC-TTTTTGTGCTGGTGGGAAGAAGGC-AGAGAGATGAAGGCCCCCCTGGAATGAGTCGTGGCTGAGGCAGATCCCTTGACCTGAGCTGAGAGCATTTTGGACCTTGGCTCTGAAGCTCTTGACATCTGT-GTC-----TGGGGCCCTTGGCCCTCAAGAGGTCACGACTGCACTAACATGCGGCTTTGGTGGCCACTGGGATCAGAGTC------------CAGTGGAGCCTACACGCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715493 275 + 11732439 ----GCTTCCTGGATTTC--CCTGCTCGTGACTGGGTGCC-GGGTGAGTGAGAGCTGTACACC-TTTCTGTGCTGGTGGGAAGAAGGT-AGAGAGCTGAAGCCCCTCCTGGAATGAGTCATGGCTGAGGCAGATCCCTTGACCTGAGCTGAAAGCATTTTGGGCCTTGGCTCTGCAGCTCTTGACACCTGT-GTC-----TGGGGCCCTTGGCCCTCAAGAGGTTGTGACTGCACTATCACGCGGCTTCGGTGACCACTGGGATCAGAGCC------------CAATGGAGCCCACGTGCTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1891435 278 - 2029793 ----CCCTCCTGGGTTTC--CCGGCTTGTGGCTGGGGACGCAGGTGCATGAGAGCCTGGCCCC-TCTTGGTACTGGTTGGAGTA-GGT-AGGGAGATGAAGCCCCTCGTGGAATGAGTCATGGTGGAAACAGACCCCTTACCCTGAGCTGGCAGCTCTCCTGACCTTGGCTCTGAAGCTCCTGATGCCTGT-GTC-----TTGGACCCCTGGGTCTCAGGCTGTCATGCCTGCTCTAACCTG-GGGTTTGGTGACCCCTGGGATC-GATTCCATT------GGCACCAGGAGCCATGT-CTG i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22879291 270 + 22939663 ----TCTTCCTGGGTTTC--CTTGCGTGGGACTGGGGACCCAGGTGCATGAGAGACTGGATCC-TCTTTGTATTGGTAGGAAGG-GGT-AGGGAGATGAAGCCCCTCCTGGAATAAGTCATGGCGGAAGCAGATCCCTTACCCTGAGTTGACAGCTCTCCTGATCTTGGCTCTGAAGGCCTTGATGCCCAT-GTC-----TTGGACTCCTGGGACTTGGGTGGTCATGCCTGCTCT--CTGG-GAATTCATTGACCACTGGGATC-AATTC------------TACCAGAAACTATCT-CTG i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181822032 227 + 182113224 C---CCTTCTTGGATATC--CCTTCTTATTGT-----------------------------CC-TCTCTGTACTA-TGGGAAGGGGTTGGGGGAAGCTGAGCTCCCTTGAAAATGATCCATGGTGG--------TTCTTGCCTTGAGCT-ACTGTCCTACTAACATTAGCCCCGAAGTTCT------CCAT-GTTCTCAATGGGACCACTGGCTCTGA---------------------CTTTGTGTTTGGTGACTATGTAGATCAGAGTCTGATG-TGAAGGCACCAAAAGCCATGCCCA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47634587 273 + 47698779 GTGTCCCTCCTGCAGTTCCTCCAAGTGATCTCTGTG-ACCTGGGAGAGTGAG----------C-TGTC----CTGGTAGCAGGGGTG--AGGGAGGCTGAGCCCCTCCTGGAGTGAGTCCTGGTGGAGACAGA-CCCCTGACCTGAGCCCACAGGTCTCCCAGCCTCAGCTCCAAACTCCTGGTTGCCTGGAGTC-----TGG--CTCCTGGCCCTCACGTG-CCACGCTGGCTCTAACCTG-GGTATTGGTGCGTGTTGGCGTCAGAGAGCCCTGCTGGCAGCATCAGAAGCCATTCTCG- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56900440 279 + 57149010 I e dasNov3.JH569290 272679 65 - 397369 I a score=463131.000000 s hg38.chr20_KI270870v1_alt 145522 37 + 183433 TGAGTTTGTGGAGAGGTGTGGCTCATTCCCCCTTAGG-------- s panTro5.chr20 66480783 37 + 66533130 TGAGTTTGTGGAGAGGTGTGGCTCATTCCCCCTTAGG-------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148446 37 + 62195757 TGAGTTTGTGGAGAGGTGTGGCTCATTCCCCCTTAGG-------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534668 37 - 578057 TGAGTTTGTGGAGAGGTGTGGCTCATTCCCCCTTAGG-------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056322 37 - 110113093 TGAGTTTGTGGAGAGGTGTGGCCCATTCCCACTTAGG-------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793946 37 - 92844088 TGATTTTGTGGAGAGGTGAGGCTCATTCCCACTTAGG-------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459462 37 + 96509753 TGATTTTGTGGAGAGGTGAGGCTCATTCCCACTTAGG-------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930819 37 - 16982598 TGATTTTGTGGAGAGGTGAGGCTCATTCCCACTTAGG-------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731397 37 - 3785965 TGATTTTGTGGAGAGGTGAGGCTCATTCCCACTTAGG-------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323224 37 - 90373283 TGATTTTGTGGAGAGGTGAGGCTCATTCCCACTTAGG-------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123059 37 - 179258 TGATTTTGTGGAGAGGTGAGGCTCATTCCCACTTAGG-------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598767 37 - 5823884 TGATTTTGTGGAGAGCTGAGGCTCATTCACACTTAGG-------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80003 37 + 372756 TGCGTTTGTGGAGAGGTGTGACTCATTCCCACTTAAG-------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315146 37 + 16356641 TGCATTTGTGGAGAGGTGTGACTCATTCCCACTTAAG-------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1183982 37 + 1231380 TGCGTTTATGGAGAGGCGTGACCCATTCCCACTTAAG-------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715768 37 + 11732439 TGCGTTTGTGGGGAGGTGTGACTCATTCCCACTTCAG-------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56900719 36 + 57149010 TGAGTTTGTGGAAAG-TGTGACTCACTTCCACTTAGG-------- i micMur3.chr18 I 279 C 0 s proCoq1.NW_012150197v1 1891714 36 - 2029793 TGAGTTTGTGGAAAG-TGTGACTCACTTCCACTTAGG-------- i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22879562 36 + 22939663 TTAGTCTGTGGAGAG-TATGACTCACTTCCACTTACG-------- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181822259 35 + 182113224 TGGGTTTGTGGACAG-TATGAC-CACTCCCATCTAGG-------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47634860 44 + 47698779 GGGGTTGGTGGGGCTGTG-AACTCAGTTTCAAGGAAGAGGGAAGC i canFam3.chr24 C 0 C 0 e dasNov3.JH569290 272679 65 - 397369 I a score=163810.000000 s hg38.chr20_KI270870v1_alt 145559 9 + 183433 TGAGGAAAT s panTro5.chr20 66480820 9 + 66533130 TGAGGAAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148483 9 + 62195757 TGAGGAAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534705 9 - 578057 TGAGGAAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056359 9 - 110113093 TGAGGAAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793983 9 - 92844088 TGAGGAAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459499 9 + 96509753 TGAGGAAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930856 9 - 16982598 TGAGGAAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731434 9 - 3785965 TGAGGAAAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323261 9 - 90373283 TGAGGAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123096 9 - 179258 TGAGGAAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598804 9 - 5823884 TGAGGAAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80040 9 + 372756 TGAGGAAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315183 9 + 16356641 GGAGAAAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184019 9 + 1231380 TGAGGACAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715805 9 + 11732439 TGAGGAAAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56900755 9 + 57149010 TGAGGAAAT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1891750 9 - 2029793 TGAGGAAAT i proCoq1.NW_012150197v1 C 0 I 3 s otoGar3.GL873542 22879598 9 + 22939663 TGAGGAAAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822294 9 + 182113224 AAAGGAGAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47634904 9 + 47698779 TGAGGAAAT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 272744 9 - 397369 TAAGCACAT i dasNov3.JH569290 I 65 C 0 a score=127901.000000 s hg38.chr20_KI270870v1_alt 145568 10 + 183433 TCAGCATTGC s panTro5.chr20 66480829 10 + 66533130 TCAGCATTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148492 10 + 62195757 TCAGCATTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534714 10 - 578057 TCAGCATCGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056368 10 - 110113093 TCTGCATCGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92793992 10 - 92844088 TCAGCATCGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459508 10 + 96509753 TCAGCATTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930865 10 - 16982598 TCAGCATCGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731443 10 - 3785965 TCAGCATTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323270 10 - 90373283 TCAGCATCGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123105 10 - 179258 TCAGCATCGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598813 10 - 5823884 TCAGCATCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80049 10 + 372756 TCAGCATCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315192 10 + 16356641 TCAGCATCGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184028 10 + 1231380 TCAGCATCGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715814 10 + 11732439 TCAGCATCGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56900764 10 + 57149010 TTAGCGTGAT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22879607 10 + 22939663 TTATCATGAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822303 4 + 182113224 ------TCTC i mm10.chr2 C 0 I 1 s canFam3.chr24 47634913 10 + 47698779 GCAGCATCAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 272753 10 - 397369 TCAGCATCAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1891759 3 - 2029793 I a score=934711.000000 s hg38.chr20_KI270870v1_alt 145578 64 + 183433 CTGAACAAACTTCCATCTTTAATGTAGCATTTAATACCTCCCAAAGAGATTTAAGCCTTTCCAC s panTro5.chr20 66480839 64 + 66533130 CTGAACAAACTTCCATCTTTAATGTAGCATTTAATACCTCCCAAAGAGATTTAAGCCTTTCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148502 64 + 62195757 CTGAACAAACTTCCATCTTTAATGTAGCATTTAATACCTCCCAAAGAGATTTAAGCCTTTCCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534724 64 - 578057 CTGAACAAACTTCCATCTTTAACGTAGCATTTAATACCTCCCAAAGAGATTTAAGCCTTTCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056378 64 - 110113093 CTGAACAAACTTCCATCTTTAATGCAGCATTTCATACCTCCCAAAGAGATTTAAGCCTTTCCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794002 64 - 92844088 CTGAACAAACTTCCATCTTTAATGTAGCAATTAATATCTCCCAAATAGATTTAAGCCTTTCCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459518 64 + 96509753 CTGAACAAACTTCCATCTTTAATGTAGCAATTAATATCTCCCAAAGAGATTTAAGCCTTTCCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930875 64 - 16982598 CTGAACAAACTTCCATCTTTAATGTAGCAATTAATATCTCCCAAAGAGATTTAAGCCTTTCCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731453 64 - 3785965 CTGAACAAACTTCCATCTTTAATGTAGCAATTAATATCTCCCAAAGAGATTTAAGCCTTTCCAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323280 64 - 90373283 CTGAACAAACTTCCATCTTTAATGTAGCAATTAATATCTCCCAAAGAGATTTAAGCCTTTCCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123115 64 - 179258 CTGAACAAACTTCCATCTTTAATGTAGCAATTAATATCTCCCAAAGAGATTTAAGCCTTTCCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598823 64 - 5823884 CCGAACAAACTTCCATCTTTAATGTAGCAATTAATATCTCCCAAAGAGATTTAAGCCTTTCCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80059 64 + 372756 CTGAACAAACTTCCATCTTTAATTTGGCAATTAATACCTCCCAAAGAGATTTAAGGCTTTCCAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315202 64 + 16356641 CTGAACAAACTTCCATCTTTAATTTAGCAATTAATACCTCCCAAAGAGATTTAAGGCTTTCCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184038 64 + 1231380 CTGAACAAACTTCCATCTTTAATTTAGCAATTAATACCTCCCAAAGAGATTTAAGGCTTTCCAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715824 64 + 11732439 CTGAACAAACTTCCATCTTTAATTTAGCACTTAATACCTCCCAAAGAGATTTAAGGCTTTCCAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56900774 64 + 57149010 CTGGACAAACTTTCATTTTTGTCTTAACAATTGATGCCTCCCAAAGAGACTTAAGCCTTTCCAC i micMur3.chr18 C 0 I 244 s proCoq1.NW_012150197v1 1891762 64 - 2029793 CTCGGCAAACTTCCATTTTTGTCTTAGCAATTAATACCTCCCAAAGAAACTTAAGCCTTTCCCA i proCoq1.NW_012150197v1 I 3 I 1 s otoGar3.GL873542 22879617 63 + 22939663 CTGGAGAAACTTCTGTTTTTGTCTTAGCAATTAATACCTCCCAAA-AAACTGAAGCCTTTCCCA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181822308 57 + 182113224 TTGAACACATTTCCCT-TTGGTTGTAACAGTTAATGTCT-CTGTAGAGACCTATACTTC----- i mm10.chr2 I 1 C 0 s canFam3.chr24 47634923 63 + 47698779 CTGGAAAGA-TTCCATCTTTACCTTAGTGATTAATCCCTGACAGAGAGATTTATACCTTTGTAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 272763 59 - 397369 CTGGGAAAA--TCTTGTTTTATTGTAGCAGTTAATTCCTGCCAGTGTCACATG---TTGCCCAC i dasNov3.JH569290 C 0 C 0 a score=2057577.000000 s hg38.chr20_KI270870v1_alt 145642 192 + 183433 CTGCCA--GCC-AGCTCGGAAGGCAAACTATAAACACTCATCTCACAATTTTCA----AGACAGATTT----------CTCCAGCGCATAATGTGG-GGTA-TGAGCCCCAGAGAGAGATGAGCTCGGAAAACCAGGAGGGGAGA----CCTCTGCT----------------------GCACAGGGGGTTTC-AGT----TCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT s panTro5.chr20 66480903 191 + 66533130 CTGCCA--GCC-AGCTCGGAAGGCAAACTATAAACACTCATCTCGCAATTTTCA----AGACAGACTT----------CTCCAGCGCATAATGTGG-GGTA-TGAGCCCCAGAGAGAGATGAGCTCGGAAAACCAGGAGGGG-GA----CCTCTGCC----------------------GCACAGGGGGTTTC-AGT----TCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148566 191 + 62195757 CTGCCA--GCC-AGCTCGGAAGGCAAACTATAAACACTCATCTCACAATTTTCA----AGACAGACTT----------CTCCAGCGCATAATGTGG-GGTA-TGAGCCCCAGAGAGAGATGAGCTCGGAAAACCAGGAGGAG-GA----CCTCTGCC----------------------ACACAGGGGGTTTC-AGT----TCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534788 192 - 578057 CTGCCA--GCC-AGCTCGGAAGGCAAACCATAAACACTCATCTCACAATTTTCA----AGACAGACTT----------CTCCAGCGCATAATGTGG-GGCA-TGAGCCCCAGAGAGAGATGAGCTCAGAAAACCAGGAGGGGGGA----CCTCTGCT----------------------GCACAGGGGGTTTC-AGT----TCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056442 192 - 110113093 CTGCCA--GCC-AGCTCAGAAGGCAAACCATAAACACTCATCTCACAATTTTCA----AGACAGACTT----------CTCCAGCACATAATGTGG-GATA-TGAGCCCCAGAGAGAGATGAGCTCAGAAAACCAGGAGGGGGGA----CCTCTGCT----------------------GCACAGGGGGTTTC-AGT----TCTAGAAAGCAGGCTTCCCCACAGCACTCTGGTCCAGGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794066 194 - 92844088 CTGCCA--CCC-AGCTCAGGAGGCAAACCATAAACACCCATCTCAGAATTTTCA----AGACAGACTT----------CTCCAGCACGCGATGTGG-GGTG-TGAGCCCC--AGAGAGATGAGCTCAGACACCCAGGAGGGGGGA----CCTCTGCT----------------------GCACGGGGGGTTGC-AGTTCCATCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459582 194 + 96509753 CTGCCA--CCC-AGCTCAGGAGGCAAACCATAAACACCCATCTCAGAATTTTCA----AGACAGACTT----------CTCCAGCACGCGATGTGG-GGTG-TGAGCCCC--AGAGAGATGAGCTCAGACACCCAGGAGGGGGGA----CCTCTGCT----------------------GCACGGGGGGTTGC-AGTTCCATCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16930939 194 - 16982598 CTGCCA--CCC-AGCTCAGGAGGCAAACCATAAACACTCATCTCAGAATTTTCA----AGACAGACTT----------CTCCAGCACGCGATGTGG-GGTG-TGAGCCCC--AGAGAGATGAGCTCAGACACCCAGGAGGGGGGA----CCTCTGCT----------------------GCACGGGGGGTTGC-AGTTCTATCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731517 194 - 3785965 CTGCCA--CCC-AGCTCAGGAGGCAAACCATAAACACTCATCTCAGAATTTTCA----AGACAGACTT----------CTCCAGCACGCGATGTGG-GGTA-TGAGCCCC--AGAGAGATGAGCTCAGACAACCAGGAGGGGGGA----CCTCTGCT----------------------GCACGGGGGGTTGC-AGTTCCATCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323344 198 - 90373283 CTGCCA--CCC-AGCTCAGGAGGCAAACCATAAACACTCATCTCAGAATTTTCAAGACAGACAGACTT----------CTCCAGCACGCAATGTGG-GGTA-TGAGCCCC--AGAGAGATGAGCTCAGACAACCAGGAGGGGGGA----CCTCTGCT----------------------GCATGGGGGGTTGC-AGTTCCATCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123179 194 - 179258 CTGCCA--CCC-AGCTCAGGAGGCAAACCATAAACACTCATCTCAGAATTTTCA----AGACAGACTT----------CTCCAGCACGCGATGTGG-GGTA-TGAGCCCC--AGAGAGATGAGCTCAGACAACCAGGAGGGGGGA----CCTCTGCT----------------------GCACGGGGGGTTGC-AGTTCCATCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5598887 194 - 5823884 CTACCA--CCC-AGCTCAGGAGGCAAACCATAAACACTCATCTCACAATTTTCA----AGACAGACTT----------CTCCAGCACGCAATGTGG-GGTA-TGAGCCCC--AGAGAGATGAGCTCAGACAACCAGGAGGGGGGA----CCTCTGCT----------------------GCACGGGGGGTTGC-AGTTCCATCTAGAAAGCAGGCTTCCCCACAGCACTTTGGCCCAGGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80123 192 + 372756 CTGCCA--TCC-AGCTCAGGAGGCAAACTATAAACACTCATCTTACAATTGTCA----AGACAGACTT----------CTCCAGCGTGTAGCGTGG-TGTA-TGAGCTCCAGAGAGAGATGAGGTCAGAAAGCCAGGAGAGGGGA----CCTCTGCT----------------------GCACAGCGGGTTTC-AGTTCCATCTAGAAAGCAGGCTTCCCTACACCACTCTGGCTCAG---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315266 192 + 16356641 CTGCCA--TCC-AGCTCAGGAGGCAAACCATAAACACTCATCTCATAATTGTTG----AGACAGACTT----------CTCCAGCGTGTAGCGTGG-TGTC-TGGGCCCCGGCGACAGATGAGGCCAGAAGGCCAGGAGAGGGCA----CCTCTGCT----------------------GCACACGGGGCTTC-AGTTCCATCTGGAAATCAGGCTTCCCCACACCGCTCTGGCTCAG---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184102 189 + 1231380 CTGCCA--TCC-GGCTCAGGAGGCAAACCGTAAACACTCATCTCACAATTGTCA----AGACAGACTT----------CTCCAGCGTGTGGTGTGG-TGCA-TGAGCCC--GAGAGAGATGAGGCCAGAGAGCCAGGAGAGGGGA----CCTCTGCT----------------------GCAC-GGGGGTTTC-GGTTCCATCTAGAAAGCGGGCTTCTCCACACCACTCTGGCTCAG---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2715888 192 + 11732439 CTGCCA--TCC-AGCTCAGGCGGCAAACCATGAACACTCATCTCACAATCGTCA----AGACAGACTT----------CTCCAGCGTGTAGTGTGG-TGTG-TGAGCCCCGGAGAGAGATGAGGTCAGAAAGCCAGGAGAGGGGA----CGTCTGCT----------------------GCACAGGGAGTTTC-AGTTCCGTCTAGAAAGCAGCCTTCCCCACACCACTCTGGCTCAG---- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1891827 190 - 2029793 GTGCAA--CCT-AGGCAAGGAGGCGAACGGCACACACTCATCTCCCAGTGTTCA----AGACAGACTT----------TCCCAGTGGGGAATGAGG-GACA-TGAGCCCCAGAGAGAGACGAGCTTGGAAAGCCAGGCGGAA-GT----CCTCTGCC----------------------ACACGGGGGGTTTCTAGTTCTA-CTAGAAAGCAGGCCTCCCCTCACCACGCTGGCCGG----- i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22879681 197 + 22939663 CTGCAA--CCT-AGGTGAGGAAGCAAACAGCAAATACTCAAGTCTCAGTTTTCA----AGAAAGATTT----------TACCAGTGTGGAATGTGA-GGTATTGAACCCCAGAAAGAGATGAGCTCAGAAAACCAGGCACAG-GT----CCTCTATT----------------------ACACCGGGAATTTCTAGTTCTACCTAGAAAGCAGGCCTCCCCATATCACATGGGCCTGGGCCT i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181822365 145 + 182113224 CTGCCAAGGTC-AAGGAAAGAGGAAGAT----AATACTGTTCTC--AGTTTCCA----GGA-----TT----------TCCCAATA-------------TC-CATGCCCA----AGAGAGGAGCTTAG--GACTTGGCAAGAGGT----TCACCTCT----------------------AAACAAAAATCTCC-CTTTCTGTCTCCAAAGCAG---------------TTTGA--------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47634986 181 + 47698779 CCATCA--CCCGGGGGCAGGAGGCAAAC-ATAGACACATGGCTCCTAGTGTCTG----AGGCTCACTT----------TTCCAGCATGACATGTGG-GATA-TGAGCTGC-------------------CCACCATGCGAGGCTAGTTGCCTCTGCT----------------------TGGAAAGGGTCCCT-AGTTGTATTTAGAAAACAGGCCTCCCCTGCACCCCTGCATGCAGGCCT i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 272822 224 - 397369 CTGTGA--CCG-AGGCCAGGAGGCAAACCACAAACAC-AGCCTAAAAGCTTCCA----AAGTAAACTCAGATTCTTGATCCCAGAATG-AATATGACAATA-TGAGCGATTGAGAAAGATAAGCGTGGAC-CCTGGGTTTGACGG----CCTCTGCTTGCAACGGGGCAGTGGTGGGGGTGAGAGGAGATTCT-AGATCTACCTGGGAACCAGG--TCTCTACTGCAGGCCAGCTGTGGCTT i dasNov3.JH569290 C 0 I 11 e micMur3.chr18 56900838 244 + 57149010 I a score=3390716.000000 s hg38.chr20_KI270870v1_alt 145834 194 + 183433 GCCTGAGGCCCAAAGCCACAACTGA------------------GGTTTCTCTCT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCTGCCATGGTGCAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--GCCCCCC--GCTCCTGG-----GCTCTTTGC--CCACCCAACCC s panTro5.chr20 66481094 194 + 66533130 GCCTGAGGCCCAAAGCCACAACTGA------------------GGTTTCTCTCT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCTGCCATGGTGCAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CCACCCAACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148757 194 + 62195757 GCCTGAGGCCCAAAGCCACAACTGA------------------GGTTTCTCTCT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCTGCCATGGTGCAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CCACCCAACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 534980 194 - 578057 GCCTGAGGCCCAAAGCCACAACTGA------------------GGTTTCTCTCT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCTGCCATGGTGCAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CCACCTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056634 194 - 110113093 GCCTGAGGCCCAGGGCCACAACTGA------------------AGTTTCTCTCT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCTGCCATGGTGCAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--ACCCCCC--ACTCCTGG-----GCTCTTTGC--CCACCCAACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794260 194 - 92844088 GCCTGAGGCCCAGAGCCACAGCTCA------------------GGTTTCTCACT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTACAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CTTCCCAACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459776 194 + 96509753 GCCTGAGGCCCAGAGCCACAGCTCA------------------GGTTTCTCACT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTACAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CTTCCCAACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931133 194 - 16982598 GCCTGAGGCCCAGAGCCACAGCTCA------------------GGTTTCTCACT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTACAGCTGCAGTCCCAGGTAGGTGGTG-------------CT--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CTTCCCAACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731711 194 - 3785965 GCCTGAGGCCCAGAGCCACAGCTCA------------------GGTTTCTCACT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTACAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CTTCCCAACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323542 194 - 90373283 GCCTGAGGCCCAGAGCCACAGCTCA------------------GGTTTCTCACT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTACAGCTGCAGTCCCAGGTAGGTGTTG-------------CC--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CTTCCCAACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123373 194 - 179258 GCCTGAGGCCCAGAGCCACAGCTCA------------------GGTTTCTCACT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTACAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CTTCCCAACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599081 194 - 5823884 GCCTGAGGCCCAGAGCCACAGCTCA------------------GGTTTCTCACT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTACAGCTGCAGTCCCAGGTAGGTGGTG-------------CC--GCCCCCC--ACTCCTGG-----GCTCTTTGC--CTTCCCAACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80315 194 + 372756 GCCTGAGGCCCAGAGCCACAACTAA------------------GGTTTCTCTCT----------------------------------------------------------------------------------------------GGATCAGTGTTGGAGAATGACGAAGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTGCAGCTGCAGTCCCAGGTGGGTGGTG-------------CC--GCTCCCC--ACTCCTGG-----GCTCTTTGC--TCTCCCAACCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315458 192 + 16356641 GCCTGAGGCCCAGAGCCACAACTGA-------------------GTTTCTCTCT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAACGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTGCAGCTGCAGTCCCAGGTGGGTGGCG-------------CT--GCT-CCC--GCTCCTGG-----GCTCTTTGC--CCTCCCAACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184291 193 + 1231380 GCCTGAGGCCCAGAGCCACAACTGA------------------GGTTTCTCTCT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGACGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTGCAGCTGCAGTCCCAGGTGGGTGGTG-------------CC--ACC-CCT--GCTCCTGG-----GCTCTTTGC--TCTCCCAACAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2716080 194 + 11732439 GCCTGAGGCCCAGAGCCACAGCTGA------------------GGTTTCTCTCT----------------------------------------------------------------------------------------------GGGTCAGTGTTGGAGAATGACGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAACGAGTCCAACTCGGAGATGGAGGCCGCCATGGTGCAGCTGCAGTCCCAGGTGGGTGGTG-------------CC--GCTCCCC--ACCCCCGG-----GCTCTTTGC--TCTCCCAACCC i aotNan1.NW_018500483v1 C 0 I 10 s micMur3.chr18 56901082 193 + 57149010 GCCTGAGGCCCAGAGCTATCACTGG------------------GGTTTTTCTCC-----------------------------------------------------------------------------------------------GGGCAGTGCTAGAGAATGACGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAATGAGTCCAACTCGGAGATGGAGGCCGCCATGGTGCAGCTGCAGTCCCAGGTGGGTGGCA-------------CT--GTCCCCC--AGCCCCAG-----GCTCTCTGC--CCTCCCAACCC i micMur3.chr18 I 244 C 0 s proCoq1.NW_012150197v1 1892017 194 - 2029793 GCCTGAGGCCCAGAGCCCCCACTGG------------------GGTTTCTCTCC----------------------------------------------------------------------------------------------GGGGCAGTGCTGGAGAATGATGAGGAGATCAAGCAGCTGAACCAGGAGATCCGAGACCTGAATGAGTCCAACTCGGAGATGGAGGCCGCCATGGTGCAGCTGCAGTCCCAGGTGGGTGGCA-------------CT--GTCCCCC--AGCCCCAG-----GCTCTCTGC--CCTCCCAACCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22879878 190 + 22939663 ----GAGGCCCAGAGCCACCACTGG------------------GGTTTCTCTCC----------------------------------------------------------------------------------------------GGGACAGTGCTGGAGAATGACGAGGAGATTAAGCAGCTGAACCAGGAGATCCGAGACCTGAATGAATCCAACTCGGAAATGGAGGCTGCTATGGTGCAGCTGCAGTCCCAGGTGGGTAGCA-------------CT--GTCCCCC--ACCTCTGG-----GTTCTCTGC--CCTCCCAACCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822510 293 + 182113224 ----------CAGAACCACAGttgcttgcttgcttgcttgcttgcttcctccctccctccctccctccctccctccctccctccctccctccctccctccctccctcctttccttcctTTTTTTCTTACTTTCTTCCTTTTTTATTTTCTGGCAGTGCTGGAGAATGATGAGGAGATCAAGCAGCTAAATCAGGAGATACGAGACTTAAATGAGTCCAATTCGGAAATGGAGGCTGCCATGGTGCAGCTGCAGTCTCAGGTGGGTGACA-------------CT--ACT-------CTACTTG-----GCTCTTTCCTGCCACCCAGAGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47635169 206 + 47698779 GCGTAAAGCCAAGAGCCACAACCAA------------------GGTTTCTCTCT----------------------------------------------------------------------------------------------GGAGCAGTGTTGGAGAACGATGAGGAGATCAAGCAGCTGAACCAGGAGATTCGCGACCTGAACGAGTCCAACTCTGAGATGGAGGCCGCCATGGTGCAGCTGCAGTCCCAGGTGGGTGGTGGTGTTCACCTGCCCC--GCCCCCCCAGCCTCGGG-----GGTCCTCGT--CCTC--AGCC- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 273057 196 - 397369 GTTTGAGG--CAGAGGCATGACCCA------------------GTTCTCTCTGT----------------------------------------------------------------------------------------------G---CAGTGCTTGAGAATGACGAGGAGATCAAGCAGCTGAACAAGGAGATCCGTGACCTGAATGAATCCAATTCGGAGATGGAGGCCGCCATGGTGAAGCTGCAGTCCCAGGTGAGTGCTG-------------CCTGGCCCCTG--GCTCCCTGCCACAGGCCATTGC--CCTCCCTAGCC i dasNov3.JH569290 I 11 C 0 a score=21221.000000 s hg38.chr20_KI270870v1_alt 146028 3 + 183433 ---AAA s panTro5.chr20 66481288 3 + 66533130 ---AAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148951 3 + 62195757 ---AAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535174 3 - 578057 ---AAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056828 3 - 110113093 ---AAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794454 3 - 92844088 ---AAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459970 3 + 96509753 ---AAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931327 3 - 16982598 ---AAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731905 3 - 3785965 ---AAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323736 3 - 90373283 ---AAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123567 3 - 179258 ---AAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599275 3 - 5823884 ---AAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80509 3 + 372756 ---CAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315650 3 + 16356641 ---CAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184484 3 + 1231380 ---CAA i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56901275 3 + 57149010 ---AAA i micMur3.chr18 C 0 I 799 s proCoq1.NW_012150197v1 1892211 3 - 2029793 ---AAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880068 3 + 22939663 ---AAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822803 3 + 182113224 ---CAG i mm10.chr2 C 0 C 0 s dasNov3.JH569290 273253 3 - 397369 CCC--- i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47635375 0 + 47698779 C e aotNan1.NW_018500483v1 2716274 10 + 11732439 I a score=56995.000000 s hg38.chr20_KI270870v1_alt 146031 5 + 183433 CATTC s panTro5.chr20 66481291 5 + 66533130 CATTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148954 5 + 62195757 CATTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535177 5 - 578057 CATTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056831 5 - 110113093 CATTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794457 5 - 92844088 CATTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459973 5 + 96509753 CATTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931330 5 - 16982598 CATTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731908 5 - 3785965 CATTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323739 5 - 90373283 CATTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123570 5 - 179258 CATTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599278 5 - 5823884 CATTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80512 5 + 372756 CATTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315653 5 + 16356641 CGTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184487 5 + 1231380 CGTTC i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1892214 5 - 2029793 TGTCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880071 5 + 22939663 TGTCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47635375 2 + 47698779 ---TC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 273256 5 - 397369 CACTC i dasNov3.JH569290 C 0 I 1939 e mm10.chr2 181822806 0 + 182113224 C e micMur3.chr18 56901278 799 + 57149010 I e aotNan1.NW_018500483v1 2716274 10 + 11732439 I a score=196972.000000 s hg38.chr20_KI270870v1_alt 146036 20 + 183433 GTCTTGGGGACAG-TGAG---GCA s panTro5.chr20 66481296 20 + 66533130 GTCTTGGGGACAG-TGAG---GCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148959 20 + 62195757 GTCTTGGGGACAG-TGAG---GCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535182 23 - 578057 ATCTTGGGGACAG-TGAGGCAGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056836 20 - 110113093 ATCCTGGGGACAG-TGAG---GCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794462 20 - 92844088 ATCGTGGGAACAG-TGAG---GCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459978 20 + 96509753 ATCGTGGGAACAG-TGAG---GCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931335 20 - 16982598 ATCGTGGGAACAG-TGAG---GCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731913 20 - 3785965 ATCCTGGGAACAG-TGAG---GCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323744 20 - 90373283 ATCCTGGGAACAG-TGAG---GCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123575 20 - 179258 ATCCTGGGAACAG-TGAG---GCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599283 20 - 5823884 ATCCTGGGAACGG-TGAG---GCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80517 20 + 372756 ATCCTGGGGACAG-TGAG---GCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315658 20 + 16356641 ATCCTGGGGACAG-CGAG---GCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184492 20 + 1231380 ATCCTGGGGACAG-TGAG---GCA i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1892219 20 - 2029793 ATCCTGGGGACAG-TGCA---GTA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880076 20 + 22939663 GTCCTGGGAATAG-TGCA---GCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822806 16 + 182113224 --CCTGTGGATTGCTGAT------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47635377 20 + 47698779 CTCTTCTGGGAGG-CGGG---AGA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56901278 799 + 57149010 I e dasNov3.JH569290 273261 1939 - 397369 I e aotNan1.NW_018500483v1 2716274 10 + 11732439 I a score=241208.000000 s hg38.chr20_KI270870v1_alt 146056 23 + 183433 TCCGTCGGCACTCATCAAGGTTG s panTro5.chr20 66481316 23 + 66533130 TCCGTCGGCACTCATCAAGGTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62148979 23 + 62195757 TCCGTCGGCACTCATCAAGGTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535205 23 - 578057 TCCGTCGGCACTCATCAAGGTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056856 23 - 110113093 TCCGTCAGCACTCATCAAGGTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794482 23 - 92844088 TCCGTCGGCACTCATCAAGGTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96459998 23 + 96509753 TCCGTCGGCACTCATCAAGGTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931355 23 - 16982598 TCCGTCGGCACTCATCAAGGTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731933 23 - 3785965 TCCGTCGGCACTCATCAAGGTTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323764 23 - 90373283 TCCGTCGGCACTCATCAAGGTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123595 23 - 179258 TCCGTCGGCACTCATCAAGGTTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599303 23 - 5823884 TCCGTCGGCACTCATCAAGGTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80537 8 + 372756 TCCATCAG--------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315678 23 + 16356641 CCCGTCGGCACTTATCAAGGTTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184512 23 + 1231380 CCCGTCAGCACTTACCGAGGTTG i cebCap1.NW_016107870v1 C 0 I 105 s aotNan1.NW_018500483v1 2716284 23 + 11732439 TCCGTCGGCACTTATCAAGGTTG i aotNan1.NW_018500483v1 I 10 C 0 s proCoq1.NW_012150197v1 1892239 23 - 2029793 TCCATCAGCACCTGTCCAGGTTG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880096 23 + 22939663 TCCATCAGCACCTGTCAAGGTTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822822 13 + 182113224 TCCATCAG----TATCA------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47635397 21 + 47698779 -GCTGAGCTCCTTGTCAAGGGG- i canFam3.chr24 C 0 C 0 e micMur3.chr18 56901278 799 + 57149010 I e dasNov3.JH569290 273261 1939 - 397369 I a score=262971.000000 s hg38.chr20_KI270870v1_alt 146079 24 + 183433 CTGTCAGGGCTGAGCTGACGGACA-- s panTro5.chr20 66481339 24 + 66533130 CTGTCAGGGCTGAGCTGACGGACA-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149002 24 + 62195757 CTGTCAGGGCTGAGCTGACGGACA-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535228 24 - 578057 CTGTCAGGGCTGAGCTGACGGACA-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056879 24 - 110113093 CTGTCAGGGCTGAGCTGACAGACA-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794505 24 - 92844088 CCGTCAGGGCTGAGCTGACGGACA-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460021 24 + 96509753 CCGTCAGGGCTGAGCTGACGGACA-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931378 24 - 16982598 CCGTCAGGGCTGAGCTGACGGACA-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731956 24 - 3785965 CCGTCAGGGCTGAGCTGACGGACA-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323787 24 - 90373283 CCGTCAGGGCTGAGCTGACGGACA-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123618 24 - 179258 CCGTCAGGGCTGAGCTGACGGACA-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599326 24 - 5823884 CCGTCAGGGCTGAGCTGACGGACA-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80545 20 + 372756 ----CAGGGCTGAGCCAATGGACA-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315701 23 + 16356641 -AGTCAGGGCCGCGCCAACGGGCA-- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2716307 23 + 11732439 -AGTCGGGGCCGAGCCGACGGACA-- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1892262 24 - 2029793 CTGTCAGGGCAGAGCTGGTGGACA-- i proCoq1.NW_012150197v1 C 0 I 453 s otoGar3.GL873542 22880119 24 + 22939663 CTGTCAGGGCTGAGCTGGTGGACA-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822835 20 + 182113224 ---CTGGTACTGAATTAATGGAA--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47635418 25 + 47698779 CTGTCAG-GCTGAGCTGATGGCTGCA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56901278 799 + 57149010 I e dasNov3.JH569290 273261 1939 - 397369 I e cebCap1.NW_016107870v1 1184535 105 + 1231380 I a score=229348.000000 s hg38.chr20_KI270870v1_alt 146103 44 + 183433 ------------GCGCAGTGGCTGGCACA-CAGGCACACTTAGGACGT--G---CTGGCCGC---------------- s panTro5.chr20 66481363 7 + 66533130 ------------GCGCAGT----------------------------------------------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149026 7 + 62195757 ------------GCGCAGT----------------------------------------------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535252 44 - 578057 ------------GCGCAGTGTCTGGCACA-CAGGCACACTTAGGACGT--G---CTGGCCGC---------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056903 44 - 110113093 ------------GCGCAGTGCCTGGCACA-CAGGCACACTTTGGACTT--G---CTGGCTGC---------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794529 44 - 92844088 ------------GCGCAGTGCCTGGCACA-CAGGCACACTTAGGACGT--G---CTGGCCAC---------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460045 44 + 96509753 ------------GCGCAGTGCCTGGCACA-CAGGCACACTTAGGACGT--G---CTGGCCAC---------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931402 44 - 16982598 ------------GCGCAGTGCCTGGCACA-CAGGCACACTTAGGACGT--G---CTGGCCAC---------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3731980 44 - 3785965 ------------GCGCAGTGCCTGGCACA-CAGGCACACTTAGGACGT--G---CTGGCCAC---------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323811 44 - 90373283 ------------GCGCAGTGCCTGGCACA-CAGGCACACTTAGGACGT--G---CTGGCCAC---------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123642 44 - 179258 ------------GCGCAGTGCCTGGCACA-CAGGCACACTTAGGACGT--G---CTGGCCAC---------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599350 44 - 5823884 ------------GCGCAGTGCCTGGCACA-CAGGCACACTTAGGACGT--G---CTGGCCAC---------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80565 44 + 372756 ------------GTGCAGTGCCTGGCACA-CAGGCACACTTAGGACTT--G---CTGGCCAC---------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315724 44 + 16356641 ------------GTGCAGGGCCTGGCACA-CAGGCACACTTAGGACTT--G---CCGGCTGC---------------- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2716330 44 + 11732439 ------------GCGCGGTGCCTGGCACA-TGGGCACACGTAGGACTT--G---CTGGCCGC---------------- i aotNan1.NW_018500483v1 C 0 I 14 s otoGar3.GL873542 22880143 42 + 22939663 ---------------CTGTGATCAGTCCGCCAGGAACACTTAGGACAT--G---CTGGCTAC---------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822855 43 + 182113224 ------------GCAAAGCACACAGCACA-TAG---CACCCAGTACCCTGG---TTAGCTGC---------------- i mm10.chr2 C 0 I 2 s canFam3.chr24 47635443 75 + 47698779 GCTCTCGGGGACGCTCGGAACAGGTCACA-CCTGCCAGCTTGGGTAGT--ACTTCTGGCAGTGGGGGTCCTGAGGGGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e micMur3.chr18 56901278 799 + 57149010 I e dasNov3.JH569290 273261 1939 - 397369 I e cebCap1.NW_016107870v1 1184535 105 + 1231380 I a score=112569.000000 s hg38.chr20_KI270870v1_alt 146147 27 + 183433 TCACAATGCGGAGTCCGTGAAGTCACA s panTro5.chr20 66481370 13 + 66533130 --------------CCGTGAAGTCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149033 13 + 62195757 --------------CCGTGAAGTCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535296 27 - 578057 TCACAATGCGGAGTCCGTGAAGCCACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056947 27 - 110113093 TCACACTGCGGTGTCCGTGAAGTCACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794573 27 - 92844088 TCACGTTGTGGTGTCTGTGAAGTCACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460089 27 + 96509753 TCACGTTGTGGTGTCTGTGAAGTCACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931446 27 - 16982598 TCACGTTGTGGTGTCTGTGAAGTCACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732024 27 - 3785965 TCACGTTGTGGTGTCTGTGAAGTCACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323855 27 - 90373283 TCACGTTGTGGTGTCTGTGAAGTCACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123686 27 - 179258 TCACGTTGTGGTGTCTGTGAAGTCACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599394 27 - 5823884 TCACGTGGTGGTGTCTGTGAAGTCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80609 27 + 372756 GCACACTGCAGTGTCTATGAGGTCACA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315768 16 + 16356641 GCGCGCTGCGGTGTCT----------- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22880185 25 + 22939663 CCATG-TGTGCTGGTTTTAAAGTCAC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822900 18 + 182113224 ACTCACTGCATTGCTTGG--------- i mm10.chr2 I 2 C 0 s canFam3.chr24 47635518 26 + 47698779 TCACGCCGGGGC-CCTGGCAGGCTTTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e micMur3.chr18 56901278 799 + 57149010 I e dasNov3.JH569290 273261 1939 - 397369 I e cebCap1.NW_016107870v1 1184535 105 + 1231380 I e aotNan1.NW_018500483v1 2716374 14 + 11732439 I a score=97066.000000 s hg38.chr20_KI270870v1_alt 146174 14 + 183433 CTGTGAGTGCCAGT s panTro5.chr20 66481383 14 + 66533130 CTGTGAGTGCCGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149046 14 + 62195757 CTGTGAGTGCCGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535323 14 - 578057 CTGTGAGTGCCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056974 14 - 110113093 CTGTGAGTGCCGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794600 14 - 92844088 CTGTGAGTGCCGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460116 14 + 96509753 CTGTGAGTGCCGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931473 14 - 16982598 CTGTGAGTGCCGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732051 14 - 3785965 CTGTGAGTGCCGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323882 14 - 90373283 CTGTGAGTGCTGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123713 14 - 179258 CTGTGAGTGCCGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599421 14 - 5823884 CTGTGAGTGCTGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80636 13 + 372756 CTGTGA-TGCTGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315784 7 + 16356641 -TGTGC-TG----- i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22880210 13 + 22939663 -TGCGAGTGCTGGC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47635544 14 + 47698779 CTGCTAGCCCTGTC i canFam3.chr24 C 0 I 9 s dasNov3.JH569290 275200 14 - 397369 CTGTCAGGGTAAGA i dasNov3.JH569290 I 1939 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e mm10.chr2 181822918 0 + 182113224 C e micMur3.chr18 56901278 799 + 57149010 I e cebCap1.NW_016107870v1 1184535 105 + 1231380 I e aotNan1.NW_018500483v1 2716374 14 + 11732439 I a score=385785.000000 s hg38.chr20_KI270870v1_alt 146188 40 + 183433 -GGGCCGCCGGAGCTGGTTGTCCCGCCAGGGCTGTGGTCTC s panTro5.chr20 66481397 40 + 66533130 -GGGCCGCCGGAGCTGGTTGTCCCGCCAGGGCTGTGGTCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149060 40 + 62195757 -GGGCCGCCGGAGCTGGTTGTCCCGCCAGGGCTGTGGTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535337 40 - 578057 -GGGCCGCTGGAGCTGGTTGTCCCGCCAGGGCTGTGGTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056988 40 - 110113093 -GGGCCGCTGGAGCTGGTTGTCCCGCTAGGGCTGTGGTCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794614 40 - 92844088 -GGGTCGCTGGAGCTGGTTGTCCCACTAGGGCTGTGGTCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460130 40 + 96509753 -GGGTCGCTGGAGCTGGTTGTCCCACTAGGGCTGTGGTCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931487 40 - 16982598 -GGGTCGCTGGAGCTGGTTGTCCCACTAGGGCTGTGGTCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732065 40 - 3785965 -GGGTCGCTGGAGCTGGTTGTCCCACTAGGGCTGTGGTCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323896 40 - 90373283 -GGGTCGCTGGAGCTGGTTGTCCCACTAGGGCTGTGGTCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123727 40 - 179258 -GGGTCGCTGGAGCTGGTTGTCCCACTAGGGCTGTGGTCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599435 40 - 5823884 -GGGTCGCTGGAGCTGGTTGTCCCGCTAGGGCTGTGGTCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80649 40 + 372756 -AGACTGCCAGAGCTGGTTGTCCTGGTAGGGCTGTGGTCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315791 37 + 16356641 ----CTGCCGGGGCTGATTGTCCTGGTGGGGCTGTGGGCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184640 40 + 1231380 -GGGCCGCCGGAGCCGGTTGTCCTGGTAGGGCTGTGGCCTC i cebCap1.NW_016107870v1 I 105 I 257 s aotNan1.NW_018500483v1 2716388 40 + 11732439 -GGGCCGCCGGAGCTGGTTGTCCTGGTAGGGCCGTGGTCTT i aotNan1.NW_018500483v1 I 14 C 0 s otoGar3.GL873542 22880223 38 + 22939663 -AGGCTGCTGGTGCTGGT--GCACTCCAGGGCTGGTGGCCA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181822918 23 + 182113224 ----------GAG--------TCTTCTCTGCCCCTGGTCTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47635567 40 + 47698779 -AGCCCCACAGGGCAGGTTCTGAGGGCCTGgccggagcctg i canFam3.chr24 I 9 C 0 s dasNov3.JH569290 275214 41 - 397369 AGGTCCATTAGGGTTAGTAGTCCTATTAGGGTATTAAATCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e micMur3.chr18 56901278 799 + 57149010 I a score=28598.000000 s hg38.chr20_KI270870v1_alt 146228 3 + 183433 ATT s panTro5.chr20 66481437 3 + 66533130 GTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149100 3 + 62195757 GTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535377 3 - 578057 GTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057028 3 - 110113093 GTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794654 3 - 92844088 GTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460170 3 + 96509753 GTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931527 3 - 16982598 GTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732105 3 - 3785965 GTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323936 3 - 90373283 GTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123767 3 - 179258 GTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599475 3 - 5823884 GTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80689 3 + 372756 GTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315828 3 + 16356641 GGT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2716428 3 + 11732439 GTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22880262 3 + 22939663 CTT i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181822941 3 + 182113224 GCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47635607 3 + 47698779 att i canFam3.chr24 C 0 I 309 s dasNov3.JH569290 275255 3 - 397369 GAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e micMur3.chr18 56901278 799 + 57149010 I e cebCap1.NW_016107870v1 1184680 257 + 1231380 I a score=160167.000000 s hg38.chr20_KI270870v1_alt 146231 15 + 183433 AGTGTTAATAACACT s panTro5.chr20 66481440 15 + 66533130 AGTGTTAATAACACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149103 15 + 62195757 AGTGTTAATAACACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535380 15 - 578057 AGTGTTAATAACACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057031 15 - 110113093 AGTGTTAATAACACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794657 15 - 92844088 AGCGTTAATAATACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460173 15 + 96509753 AGCGTTAATAATACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931530 15 - 16982598 AGCGTTAATAATACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732108 15 - 3785965 AGCGTTAATAATACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323939 15 - 90373283 AGCGTTAATAATACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123770 15 - 179258 AGCGTTAATAATACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599478 15 - 5823884 AGTGTTAATAATACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80692 15 + 372756 AGGGTTAATAATACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315831 15 + 16356641 GGTGGTAATAATACT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2716431 15 + 11732439 AGAGTTAATAACACT i aotNan1.NW_018500483v1 C 0 I 66 s otoGar3.GL873542 22880265 15 + 22939663 GGTGTCAGTAACACT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822944 15 + 182113224 AGTGTTAGTCATTGT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 275258 15 - 397369 AGTGTTAATAGTTCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e canFam3.chr24 47635610 309 + 47698779 I e micMur3.chr18 56901278 799 + 57149010 I e cebCap1.NW_016107870v1 1184680 257 + 1231380 I a score=303375.000000 s hg38.chr20_KI270870v1_alt 146246 37 + 183433 ATTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG s panTro5.chr20 66481455 37 + 66533130 ATTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149118 37 + 62195757 ATTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535395 37 - 578057 ATGAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057046 37 - 110113093 ATTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794672 37 - 92844088 ATTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460188 37 + 96509753 ATTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931545 37 - 16982598 ATTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732123 37 - 3785965 ATTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323954 37 - 90373283 GTTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123785 37 - 179258 ATTAATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599493 37 - 5823884 ATTGATAATACTAGTCCCAT---TAAGATTAGCAGCACTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80707 37 + 372756 GTTAGTTTTGGTAGGCCCAT---TAAGATGAGCAGCACTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315846 37 + 16356641 GTTGGTTTTGGTAGGCCCGT---TAAGATGAGCGGCACCG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22880280 37 + 22939663 ATCAGTTTTGCCAGTCTCAT---TAAGATTAGTATGACTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822959 27 + 182113224 CTTA-----GATAGCTCCATTGGTAAGATCAG-------- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 275273 37 - 397369 CTAAAGGATAGTAGTCCTAT---CAGAGTTAGAAGTTCTG i dasNov3.JH569290 C 0 I 1306 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e canFam3.chr24 47635610 309 + 47698779 I e micMur3.chr18 56901278 799 + 57149010 I e cebCap1.NW_016107870v1 1184680 257 + 1231380 I e aotNan1.NW_018500483v1 2716446 66 + 11732439 I a score=41012.000000 s hg38.chr20_KI270870v1_alt 146283 7 + 183433 TTTCTCT s panTro5.chr20 66481492 7 + 66533130 TTTCTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149155 7 + 62195757 TTTCTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535432 7 - 578057 TTTCTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057083 7 - 110113093 TTTCTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794709 7 - 92844088 TCTCTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460225 7 + 96509753 TCTCTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931582 7 - 16982598 TCTCTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732160 5 - 3785965 --TCTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323991 7 - 90373283 TCTCTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123822 5 - 179258 --TCTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599530 7 - 5823884 TCTCTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80744 7 + 372756 TCGCTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315883 7 + 16356641 TTGCTCT i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22880317 7 + 22939663 CTGGTAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822986 5 + 182113224 --TCTGC i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e canFam3.chr24 47635610 309 + 47698779 I e micMur3.chr18 56901278 799 + 57149010 I e dasNov3.JH569290 275310 1306 - 397369 I e cebCap1.NW_016107870v1 1184680 257 + 1231380 I e aotNan1.NW_018500483v1 2716446 66 + 11732439 I a score=241626.000000 s hg38.chr20_KI270870v1_alt 146290 40 + 183433 TACTCTCATTAGAAT----GAGTAGTCCTGTCAAGACCAGCGGT s panTro5.chr20 66481499 40 + 66533130 TACTCTCATTAGAAC----GAGTAGTCCTGTCAAGACCAGCGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149162 40 + 62195757 TACTCTCATTAGAAT----GAGTAGTCCTGTCAAGACCAGCGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535439 40 - 578057 TACTCTCATTAGAGT----GAGTAGTCCTGTCAAGACCAGCGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057090 40 - 110113093 TACTCTCATTAGAAT----GCGTAGTCCTGTCAAGACTAGCGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794716 37 - 92844088 TACTCTCATTAGAAT-------TCGTCCTGTCAAGGCTAGTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460232 37 + 96509753 TACTCTCATTAGAAT-------TCGTCCTGTCAAGGCTAGTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931589 37 - 16982598 TACTCTCATTAGAAT-------TCGTCCTGTCAGGGCTAGTGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732165 37 - 3785965 TACTCTCATTAGAAT-------TCGTCCTGTCAAGGCTAGTGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90323998 37 - 90373283 TACTCTCATTAGAAT-------TCGTCCTGTCAAGGCTAGTGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123827 37 - 179258 TACTCTCATTAGAAT-------TCGTCCTGTCAAGGCTAGTGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599537 37 - 5823884 TACTCTTATTAGAAT-------TAGTCCCGTCAAGGCAAGTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80751 39 + 372756 TACTCTCGTTAGAAT----GAGTAGT-CTGTAAAGGCTAGTGGG i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16315890 38 + 16356641 CACTCTCGTCAGAAT----GAGTAGT-CTGTAAAGGCCAG-GGG i saiBol1.JH378156 C 0 I 1 s otoGar3.GL873542 22880324 44 + 22939663 TAGTTTCATTGGTACATACAAGTAGTTGTATCAGAGTCAGTGGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181822991 30 + 182113224 TAGTGTT-------C-------TGGTTCTGCTAGTACTGGTTGT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 276616 40 - 397369 TCATCATGTGAGGCA----TAGAAATCCTGTCAAGGCTGGCAGT i dasNov3.JH569290 I 1306 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e canFam3.chr24 47635610 309 + 47698779 I e micMur3.chr18 56901278 799 + 57149010 I e cebCap1.NW_016107870v1 1184680 257 + 1231380 I e aotNan1.NW_018500483v1 2716446 66 + 11732439 I a score=268379.000000 s hg38.chr20_KI270870v1_alt 146330 26 + 183433 CCCATTAGGATTACCAGTCTTGTGAG s panTro5.chr20 66481539 26 + 66533130 CCCATTAGGATTACCAGTCTTGTGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149202 26 + 62195757 CCCATTAGGATTACCAGTCTTGTGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535479 26 - 578057 CCCATTAGGATTACCAGTCTTGTGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057130 26 - 110113093 CCCATTGGGGTTACCAGTCTTGTGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794753 26 - 92844088 CCCGTTAGGCTTACTGGTCTTGTGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460269 26 + 96509753 CCCGTTAGGCTTACTGGTCTTGTGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931626 26 - 16982598 CCCGTTAGGCTTACTGGTGTTGTGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732202 26 - 3785965 CCCGTTAGGCTTACTGGTCTTGTGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324035 26 - 90373283 CCCGTTAGGCTTACTGGTCTTGTGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123864 26 - 179258 CCTGTTAGGCTTACTGGTCTTGTGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599574 26 - 5823884 CCCATTAGGCTTACTGGTCTTGTGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80791 26 + 372756 CCCATTAGGGTTACTAGTCTTGTGAG i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16315929 26 + 16356641 CCCGTTAGGCTTACCTGTCTTGTGAG i saiBol1.JH378156 I 1 C 0 s aotNan1.NW_018500483v1 2716512 26 + 11732439 CCCATTAGGGTTACCAGTCTTGTGAG i aotNan1.NW_018500483v1 I 66 C 0 s otoGar3.GL873542 22880368 26 + 22939663 CCTGTTAGGCTTCCTAGTCTTGGTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823021 26 + 182113224 CCAATTCATGTTTCCAGTCTCATTAG i mm10.chr2 C 0 C 0 s dasNov3.JH569290 276656 26 - 397369 CCTGTTAGGGCTAGTAGTCCTGTTAG i dasNov3.JH569290 C 0 I 26913 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e canFam3.chr24 47635610 309 + 47698779 I e micMur3.chr18 56901278 799 + 57149010 I e cebCap1.NW_016107870v1 1184680 257 + 1231380 I a score=87623.000000 s hg38.chr20_KI270870v1_alt 146356 18 + 183433 TACCA-----------------------------------------------------------------GTGGTCC-ATGagc s panTro5.chr20 66481565 18 + 66533130 TACCA-----------------------------------------------------------------GTGGTCC-ATGagc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149228 18 + 62195757 TACCA-----------------------------------------------------------------GTGGTCC-ATGagc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535505 18 - 578057 CACCA-----------------------------------------------------------------GTGGTCC-ATGagc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057156 83 - 110113093 TAGCAGTGGTCCGTGAGCGTGGTCCGTGAGCGTGGTCCGTGAGCGTGGTCCGTGAGCGTGGTCCATGAGCGTGGTCC-GTGagc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794779 18 - 92844088 CACCA-----------------------------------------------------------------GTAGTCC-ATGagt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460295 18 + 96509753 CACCA-----------------------------------------------------------------GTAGTCC-ATGagt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931652 18 - 16982598 CACCG-----------------------------------------------------------------GTAGTCC-ATGAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732228 18 - 3785965 CACCA-----------------------------------------------------------------GTAGTCC-ATGAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324061 18 - 90373283 CACCA-----------------------------------------------------------------GCAGTCC-ATGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123890 18 - 179258 CACCA-----------------------------------------------------------------GTAGTCC-ATGagt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599600 18 - 5823884 TACCA-----------------------------------------------------------------GTAGTCC-ATGagg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80817 18 + 372756 CACCA-----------------------------------------------------------------GCAGTCT-GTGAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315955 18 + 16356641 TGCCA-----------------------------------------------------------------GCCGTCC-ATGAGC i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2716538 18 + 11732439 CACCA-----------------------------------------------------------------GCAGTCC-ATGAGC i aotNan1.NW_018500483v1 C 0 I 89 s otoGar3.GL873542 22880394 19 + 22939663 TGTTG-----------------------------------------------------------------GTAGTCCTGTTAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823047 17 + 182113224 CAATG-----------------------------------------------------------------AAAGCTC-ATCTG- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 303595 16 - 397369 TATCA-----------------------------------------------------------------GTCTTCT-TAGT-- i dasNov3.JH569290 I 26913 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e canFam3.chr24 47635610 309 + 47698779 I e micMur3.chr18 56901278 799 + 57149010 I e cebCap1.NW_016107870v1 1184680 257 + 1231380 I a score=571216.000000 s hg38.chr20_KI270870v1_alt 146374 94 + 183433 gtggtgcggtagagccaggtctctggagccgggtttccttcccagcacccagcacagccacatgtttgtcacagctgagggacctgacaaacct s panTro5.chr20 66481583 94 + 66533130 atggtgccgtagagccaggtctctggagccgggtttccttcccagcacccagcacagccacatgtttgtcacagctgagggacctgacaaacct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149246 94 + 62195757 gtggtgccgtagagccaggtctctggagccgggtttccttcccagcacccagcacagccacatgtttgtcacagctgagggacctgacaaacct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535523 94 - 578057 gtggtgccgtagagccaggtctctggagccgggtttccttcccagcacccagcacagccacatgtttgtcacagctgagggacctgacaaacct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057239 88 - 110113093 gtggtgccgtagagccaggtctctggagccaggtttcctccccagcacccagcacagccacatac------cagctgagggacctgagaaacct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794797 81 - 92844088 gtgatgccttagagccaggcctctggagccaggtttcttc-------cccagcacagccacatac------cagctgagggacctgacaaacct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460313 81 + 96509753 gtgatgccttagagccaggcctctggagccaggtttcttc-------cccagcacagccacatac------cagctgagggacctgacaaacct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931670 81 - 16982598 GTGATgccttagagccaggcctctggagccaggtttcttc-------cccagcacagccacatac------cagctgagggacctgacaaacct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732246 81 - 3785965 GTGATgccttagagccaggcctctggagccaggtttcttc-------cccagcacagccacatac------cagctgagggacctgacaaacct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324079 75 - 90373283 ------CCTTagagccaggcctctggagccaggtttcttc-------cccagcacagccacatac------cagctgagggacctgacaaacct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123908 81 - 179258 gtgatgccttagagccaggcctctggagccaggtttcttc-------cccagcacagccacatac------cagctgagggacctgacaaacct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599618 81 - 5823884 gtggtgccttagagccaggcctctggagccaggtttcttc-------cccagcacagccacatac------cagctgagggacctgacaaacct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80835 76 + 372756 -TGGTGCCTC--TGCTGggcctctggagccaggtttcctc---------cagcacagcctcatac------cagctgagtgacctggcaaagct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16315973 76 + 16356641 -TGGTGCCTC--agcctggcctccggagccaggtttcctc---------cagcacagcctcatgc------tagctgagtggcctggcaaagct i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22880413 68 + 22939663 GTGGTGCCTGGGAGCCTGTTCTCTAGAGCTGGGGTCTGTC--------------------TGAAC------CAGCTGAGTGACGTGGCAAACCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823064 57 + 182113224 --------------------CTCTA---------TTCCTGCCTGA--ACCAGCACAGCTACACAC------AAGTATCAGGACTTGCCCATCCT i mm10.chr2 C 0 I 3 s dasNov3.JH569290 303611 74 - 397369 GTGGTGCCT---AACATGTCCCCTTAAGCCATgttcaaac-------cccaactcagtctgggcc------ca----atgtccttggcaaactt i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e canFam3.chr24 47635610 309 + 47698779 I e micMur3.chr18 56901278 799 + 57149010 I e cebCap1.NW_016107870v1 1184680 257 + 1231380 I e aotNan1.NW_018500483v1 2716556 89 + 11732439 I a score=85337.000000 s hg38.chr20_KI270870v1_alt 146468 8 + 183433 ttcagcct s panTro5.chr20 66481677 8 + 66533130 ttcagcct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149340 8 + 62195757 ttcagcct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535617 8 - 578057 ttcagcct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057327 8 - 110113093 ttcagcct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794878 8 - 92844088 ttcagcct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460394 8 + 96509753 ttcagcct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931751 8 - 16982598 ttcagcct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732327 8 - 3785965 ttcagcct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324154 8 - 90373283 ttcagcct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123989 8 - 179258 ttcagcct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599699 8 - 5823884 ttcagcct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80911 8 + 372756 ttcggcct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316049 8 + 16356641 tttggcct i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184937 8 + 1231380 ttcggcct i cebCap1.NW_016107870v1 I 257 C 0 s otoGar3.GL873542 22880481 8 + 22939663 TTGGGCCT i otoGar3.GL873542 C 0 I 59 s mm10.chr2 181823124 8 + 182113224 CTAAAGAT i mm10.chr2 I 3 I 5 s dasNov3.JH569290 303685 8 - 397369 ctcagccc i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e canFam3.chr24 47635610 309 + 47698779 I e micMur3.chr18 56901278 799 + 57149010 I e aotNan1.NW_018500483v1 2716556 89 + 11732439 I a score=224939.000000 s hg38.chr20_KI270870v1_alt 146476 45 + 183433 -cttcctcagtcaattcctc---cataaaatggaggtaagaa-tagga---tt---- s panTro5.chr20 66481685 45 + 66533130 -cttcctcagtcaattcctc---cataaaatggaggtaagaa-tagga---tt---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149348 45 + 62195757 -cttcctcagtcaattcctc---cataaaatggaggtaagaa-tagga---tt---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535625 45 - 578057 -cttcctcagtcaattcctc---cataaaatggaggtaagaa-tagga---tt---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057335 45 - 110113093 -cttcctcagtcagttcctc---cgtaaaatggaggtaagaa-tagga---tt---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794886 32 - 92844088 -tttcctccgt----------------aaatggaggtaagaa-cagga---tt---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460402 32 + 96509753 -tttcctccgt----------------aaatggaggtaagaa-cagga---tt---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931759 32 - 16982598 -tttcctccgt----------------aaatggaggtaagaa-cagga---tt---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732335 32 - 3785965 -tttcctccgt----------------aaatggaggtaagaa-cagga---tt---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324162 32 - 90373283 -tttcctccgt----------------aaatggaggtaagaa-cagga---tt---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 123997 32 - 179258 -tttcctccgt----------------aaatggaggtaagaa-cagga---tt---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599707 33 - 5823884 -cttcctccgt---------------aaaatggaggtaagaa-cagga---tt---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80919 45 + 372756 -cttcctcagtcacttcctc---cgtaaaatggagttaagaa-aagga---tt---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316057 45 + 16356641 -cttcctcagtcacttcctc---tgtaagacggagttaagaa-tcaga---tt---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1184945 45 + 1231380 -cttcctcagtcacttcctc---cg-aaaatggagttaaGGGTTAGGG---TT---- i cebCap1.NW_016107870v1 C 0 C 0 s mm10.chr2 181823137 36 + 182113224 -TTATCTCAAT---------------AGAATGTGGGTTAGAA-CAGAACTTTT---- i mm10.chr2 I 5 C 0 s dasNov3.JH569290 303693 53 - 397369 cttagttccacgacttcctcatgagtaaaatggaggtaagaa-tagga---aggagt i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e canFam3.chr24 47635610 309 + 47698779 I e micMur3.chr18 56901278 799 + 57149010 I e aotNan1.NW_018500483v1 2716556 89 + 11732439 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=49161.000000 s hg38.chr20_KI270870v1_alt 146521 10 + 183433 ctactccagc s panTro5.chr20 66481730 10 + 66533130 ctactccagc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149393 10 + 62195757 ctactccagc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535670 10 - 578057 ctactccagc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057380 10 - 110113093 ctactccagc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794918 9 - 92844088 ctactcctg- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460434 9 + 96509753 ctactcctg- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931791 9 - 16982598 ctactcctg- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732367 9 - 3785965 ctactccag- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324194 9 - 90373283 ctactccag- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124029 9 - 179258 ctactccag- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599740 9 - 5823884 ctactccag- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80964 9 + 372756 ctactccag- i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16316102 9 + 16356641 ctactccag- i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1184990 9 + 1231380 CTACTCCAG- i cebCap1.NW_016107870v1 C 0 I 1 s mm10.chr2 181823173 7 + 182113224 CCACTAT--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47635919 5 + 47698779 ccacc----- i canFam3.chr24 I 309 I 3 s dasNov3.JH569290 303746 6 - 397369 ctacat---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e micMur3.chr18 56901278 799 + 57149010 I e aotNan1.NW_018500483v1 2716556 89 + 11732439 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=472114.000000 s hg38.chr20_KI270870v1_alt 146531 47 + 183433 cagttattgtacaatgaacgcatttctatgaggaaaacattcagcat s panTro5.chr20 66481740 47 + 66533130 cggttattgtacaatgaacgcatttctatgaggaaaacattcagcat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149403 47 + 62195757 cggttattgtacaatgaacgcatttctatgaggaaaacattcagcat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535680 46 - 578057 cggttattgtacaatgaacgcatttctatgaggaaaacattcag-at i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057390 47 - 110113093 cggttattgtacaatgaatgcatttctatgaggaaaacatttagcat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794927 45 - 92844088 --gttattgtacaatgaacgcatttctatgaggaaaacatttagcat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460443 45 + 96509753 --gttattgtacaatgaacgcatttctatgaggaaaacatttagcat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931800 45 - 16982598 --gttattgtacaatgaacgcatttctatgaggaaaacatttagcat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732376 45 - 3785965 --gttattgtacaatgaacgcatttctatgaggaaaacatttagcat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324203 45 - 90373283 --gttattgcacaatgaacgcatttctatgaggaaaacatttagcat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124038 45 - 179258 --gttattgtacaatgaacgcatttctatgaggaaaacatttagcat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5599749 45 - 5823884 --gttattgtacaatgaacgcatttctatgaggaaaacatttagcat i colAng1.NW_012114444v1 C 0 I 316 s calJac3.chrUn_GL286459 80974 47 + 372756 cggttattgtacaatgaatgcttttctatgaggaaaacatttagcat i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16316112 47 + 16356641 cggttactgtacagggaacgcgtttctataaggaaaacactttgcgt i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1185000 47 + 1231380 CAGCTACTGTACAATGAACGCGCTTCTGTGAGGAGAACATTTAGCAT i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2716645 47 + 11732439 CAGTTACTGTACAATGAACGCATTTCTATGAGGAAAACACTTAGCAT i aotNan1.NW_018500483v1 I 89 C 0 s mm10.chr2 181823180 39 + 182113224 -----CTTGTTCA--GGACTTTCTTTTG-GAAGAAAACCTTCCGTGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47635927 32 + 47698779 gcgtcccTG----ATAAATGCATTTCTATGAAAAAG----------- i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 303752 45 - 397369 --gatgttgtgagataaacgtcatactgcatggaaaacccttcacac i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e micMur3.chr18 56901278 799 + 57149010 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=149581.000000 s hg38.chr20_KI270870v1_alt 146578 14 + 183433 aagcacctgatcca s panTro5.chr20 66481787 14 + 66533130 aagcacctgatcca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149450 14 + 62195757 aagcacctgatcca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535726 14 - 578057 aagcacctgatcca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057437 14 - 110113093 aagcacctgatcca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794972 14 - 92844088 aagcacctgatcca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460488 14 + 96509753 aagcacctgatcca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931845 14 - 16982598 aagcacctgatcca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732421 14 - 3785965 aagcacctgatcca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324248 14 - 90373283 aagcacctgatcca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124083 14 - 179258 aagcacctgatcca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600110 14 - 5823884 aagcacctgatcca i colAng1.NW_012114444v1 I 316 C 0 s calJac3.chrUn_GL286459 81021 14 + 372756 atgcacccgatcca i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316159 14 + 16356641 atgcacccgatcca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185047 14 + 1231380 GTGCGCCTGATCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2716692 14 + 11732439 ATGCACCCGACCCA i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47635959 7 + 47698779 -------TGACCCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 303797 13 - 397369 -aagatctgAACTA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1892286 453 - 2029793 I e mm10.chr2 181823219 0 + 182113224 C e micMur3.chr18 56901278 799 + 57149010 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=1892177.000000 s hg38.chr20_KI270870v1_alt 146592 148 + 183433 gagtaagtgccgtcgatgagagctgCTGTTGCTGAGGGTTAGGATTACAAATTATTTTAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAAAAAAA-----GCAGTAAAGATCTTATTTTGAAAATAAG s panTro5.chr20 66481801 150 + 66533130 gagtaagtgccgtcgatgagagctgatGTTGCTGAGGGTTAGGATTACAAATTATTTTAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAAAAAAA---AAGCAGTAAAGATCTTATTTTGAAAATAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149464 148 + 62195757 gagtaagtgccgtcgatgagagctgatGTTGCTGAGGGTTAGGATTACAAATTATTTTAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATCTGTAATCA-GAAAAAAAAAA-----GCAGTAAAGATCTTATTTTGAAAATAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535740 149 - 578057 gagtaagtgccgtcaatgagagctgCTGTTGCTGAGGGTTAGGATTACAAATTATTTTAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAAAAAAA----AGCAGTAAAGATCTTATTTTGAAAATAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057451 146 - 110113093 gagtatgtgcCGTCGGTGACGGCTGCTGTTGCTGAGGGATAGGATTACAAATTATTTTAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAAAAA-------GCAGTAAAGATCTTATTTTGAAAATAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92794986 152 - 92844088 gagtaagtgtggtcaatgagagctgCTGTTGCTGAGGAATAGGATTACAAATTACTTCAAATGTTTGTGTCATATTTC-CTGATTTCCCT--AAATGAGCATTTGTAATCA-GAAAAATAAAAGAAAAACACTAAAGATCTTATTTTGAAAATAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460502 153 + 96509753 gagtaagtgtggtcaatgagagctgCTGTTGCTGAGGAATAGGATTACAAATTACTTCAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAATAAAAGAAAAACACTAAAGATCTTATTTTGAAAATAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16931859 153 - 16982598 gagtaagtgtggtcaatgaGAGCTGCTGTTGCTGAGGAATAGGATTACAAATTACTTCAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAATAAAAGAAAAACACTAAAGATCTTATTTTGAAAATAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732435 153 - 3785965 gagtaagtgtggtcaatgaGAGCTGCTGTTGCTGAGGAATAGGATTACAAATTACTTCAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAATAAAAGAAAAACACTAGAGATCTTATTTTGAAAATAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324262 153 - 90373283 gagtaagtgtggtcaatgagagctgCTGTTGCTGAGGAATAGGATTAGAAATTACTTCAAATGTTTGTGTCTTATTTT-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAATAAAAGAAAAACACTAGAGATCTTATTTTGAAAATAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124097 153 - 179258 gagtaagtgtggtcaatgagagctgCTGTTGCTGAGGAATAGGATTACAAATTACTTCAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAATGAAAGAAAAACACTAAAGATCTTATTTTGAAAATAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600124 152 - 5823884 gagtaagtgtagtcgatgagagctgctgttgctGAGGAATAGGGTTACAAATTACTTTAAATGTTTGTGTCATATTTC-CTGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAAATAAAA-AAAAACACCAAAGATCTTATTTTGAAAATAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81035 151 + 372756 gagtaagtgtggtcgatgagagctgCTGTTGCTGAGGAACAGGATTACAAATTACTTTAAATGTTTGTGTCCTATTTC-ATGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAACAAAAAA--AAAGCAGTAAGGATCTTATTTTGAAAATAAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316173 150 + 16356641 gagtaagggt-gtcaatgagagctgCTGTTGCTGAGGAATAGGATTACCAATTACTTTAAATGTTTGTGTCATATTTC-GTGGTTTCCCT-GAAATGAGCATTTGTACTCA-GAAACAAAAAA--AAAGCAGTAAAGATCTTATTTTGAAAATAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185061 151 + 1231380 CCGTGAGTGTGGCCAGTGAGAGCTGCTGTTGCTGAGGAACAGGATTACCAATCACTTTAAATGTTTGTGTCGTATTTA-ACGATTTCCCT-AAGATGAGCATTTGTAATCA-GAAACAAAAAA--AAAGCAGTAAAGATCTTATTTGGAAAATAAG i cebCap1.NW_016107870v1 C 0 I 8 s aotNan1.NW_018500483v1 2716706 150 + 11732439 GAGTAAGTGTGGTCAATGAGAGCTGCTGTTGCTGAGGAACAGGGTTACAAATTACTTTAAATGTTTGTGTCGTATTTC-ACGATTTCCCT-AAAATGAGCATTTGTAATCA-GAAAC-AAAAA--AAAGCAGTAAAGATCTTATTTTGAAAATAAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56902077 147 + 57149010 GAGTAAGTGGGGTCGATGGGAGCTGCTGTTGCTGAGGAACAGGATTACAAATTGCTTTAAATGTGTGTGTCATATTTCTCTGATTTCCCC-AAAGTGAGCATTTGTAATCA-GAAAAA-------AAGGCAGTAGAGATTTTATTTTGAAAATAAG i micMur3.chr18 I 799 C 0 s proCoq1.NW_012150197v1 1892739 148 - 2029793 gagtaagtgGGGTCGATGAGAGCTGCTGTTGCTGAGGAGCAGGATTACAAATTACTTTAAATGTGTGTGTCATATGTCTCTGATTTCCCC-GAAGTGAGCGTTCGTGATCAGGAAAAA-------AAGGCCGTAAAGATTTTATTTTGAAAATAAG i proCoq1.NW_012150197v1 I 453 C 0 s mm10.chr2 181823219 90 + 182113224 ---TAAATGCTGGTAAGTAGGGT---TGTTGCTTGGCAACAGG-------------------GCTTCTGCCCTACCTT-CTGATTGCTCA-G-----------TGTGTCTA-GAAA-------------------AGAGCTGATGTTA-------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47635966 135 + 47698779 ---------------GAAAGAGCCAC--TCGCCATGGGATAGGGTTACGAATTACTTTAAGTGTTTGTGTCGTATCTCTCTGATTTCCCCCAAAATGAACATTTGTCATCA-GAAAAAAAGAA---ATACAGTGAAGGTCTTATTTTGAAAAGAAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 303810 141 - 397369 GAGAAATTGCCATATCTAATAGCTGGTGTTGCTGAAGGATAAGATTGCAAATTACTTTAAGTGCATGCATCATATATATCTGATTTTCCC------TTTCCTTTATAATCA-GAGAA--------AAATCTGTAAACATCTTATTTTAAAAATTAA i dasNov3.JH569290 C 0 C 0 e otoGar3.GL873542 22880489 59 + 22939663 I a score=126376.000000 s hg38.chr20_KI270870v1_alt 146740 15 + 183433 AGCATGCCCCACCTG---- s panTro5.chr20 66481951 15 + 66533130 AGCATGCCCCACCTG---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149612 15 + 62195757 AGCATGCCCCACCTG---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535889 15 - 578057 AGCATGCCCCACCTG---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057597 15 - 110113093 AGCATGCCCCACCTG---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795138 15 - 92844088 AGCATGCCTCACCTG---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460655 15 + 96509753 AGCATGCCTCACCTG---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932012 15 - 16982598 AGCATGCCTCACCTG---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732588 15 - 3785965 AGCATGCCTCACCTG---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324415 15 - 90373283 AGCATGCCTCACCTG---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124250 15 - 179258 AGCATGCCTCACCTG---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600276 15 - 5823884 AGCATGCCTCACCCA---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81186 15 + 372756 AGCATGCCTCACCTG---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316323 15 + 16356641 AGCCTGCCTCGCCCG---- i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2716856 15 + 11732439 AGCATGCCTCACCCG---- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56902224 15 + 57149010 AACATACCCCACCCT---- i micMur3.chr18 C 0 I 1 s proCoq1.NW_012150197v1 1892887 15 - 2029793 AACATACCCCACCCT---- i proCoq1.NW_012150197v1 C 0 I 1 s mm10.chr2 181823309 2 + 182113224 ----TG------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47636101 8 + 47698779 ------CGCTGTCC----- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 303951 14 - 397369 -----ACTCCACTGTCCTC i dasNov3.JH569290 C 0 C 0 e cebCap1.NW_016107870v1 1185212 8 + 1231380 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=259605.000000 s hg38.chr20_KI270870v1_alt 146755 20 + 183433 TGGCTGCTGAG-TGGAGTCTG s panTro5.chr20 66481966 20 + 66533130 TGGCTGCTGAG-TGGAGTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149627 20 + 62195757 TGGCTGCTGAG-TGGCGTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535904 20 - 578057 TGGCTGCTGAG-TGGCGTCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057612 20 - 110113093 TGGCTGCTGAG-TGGAGTCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795153 20 - 92844088 TGGCTACTGAG-TGGAGTCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460670 20 + 96509753 TGGCTACTGAG-TGGAGTCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932027 20 - 16982598 TGGCTACTGAG-TGGAGTCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732603 20 - 3785965 TGGCTGCTGAG-TGGAGTCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324430 20 - 90373283 TGGCTGCTGAG-TGGAGTCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124265 20 - 179258 TGGCTGCTGAG-TGGCGTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600291 20 - 5823884 TGGCTGCTGAG-TGGAGTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81201 20 + 372756 TGGCTGCTGAG-TGGAGTCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316338 20 + 16356641 TGGCTGCTGAG-TGGGGTCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185220 20 + 1231380 TGGCTGCTGAG-TGGAGTCTG i cebCap1.NW_016107870v1 I 8 C 0 s aotNan1.NW_018500483v1 2716871 20 + 11732439 CGGCTGCCGAG-TGGAGCCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56902240 20 + 57149010 TGGAAGCTGAG-TGGAGTCTG i micMur3.chr18 I 1 I 79 s proCoq1.NW_012150197v1 1892903 20 - 2029793 TGGCAGCTGAG-TGGAGTCTG i proCoq1.NW_012150197v1 I 1 I 66 s mm10.chr2 181823311 7 + 182113224 -------TGAG-TGT------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47636109 14 + 47698779 -------TGAGCTAGGGGCCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 303965 20 - 397369 TCTCTGCTGAG-TTGGGGCTG i dasNov3.JH569290 C 0 I 35 e otoGar3.GL873542 22880489 59 + 22939663 I a score=21503.000000 s hg38.chr20_KI270870v1_alt 146775 2 + 183433 CA s panTro5.chr20 66481986 2 + 66533130 CA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149647 2 + 62195757 CA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535924 2 - 578057 CA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057632 2 - 110113093 CA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795173 2 - 92844088 CA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460690 2 + 96509753 CA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932047 2 - 16982598 CA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732623 2 - 3785965 CA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324450 2 - 90373283 CG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124285 2 - 179258 CA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600311 2 - 5823884 CG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81221 2 + 372756 CA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316358 2 + 16356641 CA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185240 2 + 1231380 CA i cebCap1.NW_016107870v1 C 0 I 32 s aotNan1.NW_018500483v1 2716891 2 + 11732439 CA i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47636123 2 + 47698779 GA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304020 2 - 397369 CA i dasNov3.JH569290 I 35 C 0 e proCoq1.NW_012150197v1 1892923 66 - 2029793 I e mm10.chr2 181823318 0 + 182113224 C e micMur3.chr18 56902260 79 + 57149010 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=104898.000000 s hg38.chr20_KI270870v1_alt 146777 13 + 183433 GCCGTGCTGGGGG s panTro5.chr20 66481988 13 + 66533130 GCCGTGCTGGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149649 13 + 62195757 GCCATGCTGGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535926 13 - 578057 GCCGTGCTGGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057634 13 - 110113093 GCCACGCTGGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795175 13 - 92844088 GCCGCAGTGGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460692 13 + 96509753 GCCGCAGTGGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932049 13 - 16982598 GCCGCAGTGGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732625 13 - 3785965 GCCGCAGTGGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324452 13 - 90373283 GCTGCAGTGGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124287 13 - 179258 GCCGCAGTGGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600313 13 - 5823884 GCCGCAATGGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81223 13 + 372756 GCAGTGCTGGGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316360 13 + 16356641 GCAGCGCTGGGGG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2716893 13 + 11732439 GCGGCGCCGGGGG i aotNan1.NW_018500483v1 C 0 I 22 s canFam3.chr24 47636125 13 + 47698779 GCAGAGCTGGGGG i canFam3.chr24 C 0 I 16 s dasNov3.JH569290 304022 13 - 397369 GCTGGGAGGGGGT i dasNov3.JH569290 C 0 I 1 e proCoq1.NW_012150197v1 1892923 66 - 2029793 I e mm10.chr2 181823318 0 + 182113224 C e micMur3.chr18 56902260 79 + 57149010 I e cebCap1.NW_016107870v1 1185242 32 + 1231380 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=214257.000000 s hg38.chr20_KI270870v1_alt 146790 37 + 183433 AG-------ACATAACTGTGCCCCTAACAG-CTAGAGGGACAAAG s panTro5.chr20 66482001 37 + 66533130 AG-------ACATAACTGTGCCCCTAACAG-CTAGAGGGACAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149662 37 + 62195757 AG-------ACATAACTGTGCCCCTAACAG-CTAGAGGGACAAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535939 37 - 578057 AG-------ACATAACTGTGCCCCTAACGG-CTAGAGGGACAAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057647 44 - 110113093 AGTGGACACACATAACTGTGCCCCTAACGG-CTAGAGGGACAAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795188 44 - 92844088 AGTGGGCACACATAACTGTGCCCCTAACGG-CTGGAGGGACAAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460705 44 + 96509753 AGTGGGCACACATAACTGTGCCCCTAACGG-CTGGAGGGACAAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932062 44 - 16982598 AGTGGGCACACATAACTGTGCCCCTAACGG-CTGGAGGGACAAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732638 44 - 3785965 AGTGGGCACACATAACTGTGCCTCTAATGG-CTGGAGGGACAAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324465 44 - 90373283 AGTGGGCACACATAACTGTGCCCCTAACGG-CTGGAGGGACAAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124300 44 - 179258 AGTGGGCACACGTAACTGTGCCTCTAATGG-CTGGAGGGACAAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600326 44 - 5823884 AGTGGGCACACATAACTGTGCCCCTAATGG-CTGGAGGGACAAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81236 22 + 372756 AGTGGGCACTCATCAGTGTGTG----------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316373 22 + 16356641 CGTGGGCGCACATCACTGTGTG----------------------- i saiBol1.JH378156 C 0 C 0 s mm10.chr2 181823318 25 + 182113224 --------------------CCCCTAATGGTTTGGACAGATCAAA i mm10.chr2 C 0 I 1 s canFam3.chr24 47636154 37 + 47698779 -------ACACATAGCTGCGTCCCTTAGGG-CTGGAGGGACAGAG i canFam3.chr24 I 16 I 2 s dasNov3.JH569290 304036 38 - 397369 ---AGGCACA---GGGTATCCTCTGTTCTG-CAGGAAGGAAAAAG i dasNov3.JH569290 I 1 C 0 e proCoq1.NW_012150197v1 1892923 66 - 2029793 I e micMur3.chr18 56902260 79 + 57149010 I e cebCap1.NW_016107870v1 1185242 32 + 1231380 I e aotNan1.NW_018500483v1 2716906 22 + 11732439 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=32237.000000 s hg38.chr20_KI270870v1_alt 146827 5 + 183433 ---GGACA s panTro5.chr20 66482038 5 + 66533130 ---GGACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149699 5 + 62195757 ---GGACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535976 5 - 578057 ---GGACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057691 5 - 110113093 ---GGACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795232 5 - 92844088 ---GGACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460749 5 + 96509753 ---GGACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932106 5 - 16982598 ---GGACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732682 5 - 3785965 ---GGACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324509 5 - 90373283 ---GGACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124344 5 - 179258 ---GGACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600370 5 - 5823884 ---GGACA i colAng1.NW_012114444v1 C 0 C 0 s proCoq1.NW_012150197v1 1892989 5 - 2029793 ---GGACA i proCoq1.NW_012150197v1 I 66 C 0 s mm10.chr2 181823344 5 + 182113224 ---GGATA i mm10.chr2 I 1 C 0 s canFam3.chr24 47636193 4 + 47698779 ----GGTA i canFam3.chr24 I 2 I 1 s dasNov3.JH569290 304074 5 - 397369 GGTGG--- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56902260 79 + 57149010 I e saiBol1.JH378156 16316395 0 + 16356641 C e cebCap1.NW_016107870v1 1185242 32 + 1231380 I e calJac3.chrUn_GL286459 81258 0 + 372756 C e aotNan1.NW_018500483v1 2716906 22 + 11732439 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=63601.000000 s hg38.chr20_KI270870v1_alt 146832 7 + 183433 --AGGAAGT s panTro5.chr20 66482043 7 + 66533130 --AGGAAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149704 7 + 62195757 --AGGAAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535981 7 - 578057 --AGGAAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057696 7 - 110113093 --AGGAAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795237 7 - 92844088 --AGGAAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460754 7 + 96509753 --AGGAAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932111 7 - 16982598 --AGGAAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732687 7 - 3785965 --AGGAAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324514 7 - 90373283 --AGGAAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124349 7 - 179258 --AGGAAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600375 7 - 5823884 --AGGAAGT i colAng1.NW_012114444v1 C 0 C 0 s micMur3.chr18 56902339 7 + 57149010 --AGGAGGT i micMur3.chr18 I 79 C 0 s proCoq1.NW_012150197v1 1892994 7 - 2029793 --AGGAGGT i proCoq1.NW_012150197v1 C 0 C 0 s mm10.chr2 181823349 5 + 182113224 ----GAATC i mm10.chr2 C 0 C 0 s canFam3.chr24 47636198 7 + 47698779 --AGGAGGT i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 304079 9 - 397369 GTGGGTAGT i dasNov3.JH569290 C 0 C 0 e saiBol1.JH378156 16316395 0 + 16356641 C e cebCap1.NW_016107870v1 1185242 32 + 1231380 I e calJac3.chrUn_GL286459 81258 0 + 372756 C e aotNan1.NW_018500483v1 2716906 22 + 11732439 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=735299.000000 s hg38.chr20_KI270870v1_alt 146839 60 + 183433 G---ACCAGGTCCCACAGAGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGATGGGGAGATG s panTro5.chr20 66482050 60 + 66533130 G---ACCAGGTCCCACAGAGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGATGGGGAGATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149711 60 + 62195757 G---ACCAGGTCCCACAGAGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGATGGGGAGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 535988 60 - 578057 G---ACCAGGTACCACAGAGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGATGGGGAGATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057703 60 - 110113093 G---ACCAGGTCCCACAGAGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGTTGGGGAGATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795244 60 - 92844088 G---ACCAGGTCCCACAGGGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGATGGGGAGACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460761 60 + 96509753 G---ACCAGGTCCCACAGGGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGATGGGGAGACG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932118 60 - 16982598 G---ACCAGGTCGCACAGGGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGATGGGGAGACG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732694 60 - 3785965 G---ACCAGGTCCCACAGGGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGATGGGGAGACG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324521 60 - 90373283 G---ACCAGGTCCCACAGGGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAAATGGGGAGACG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124356 60 - 179258 G---AGCAGGTCCCACAGGGAA----------TTTG-----------GGCAGAGGCCCT---CTGGGCAGGG---A---CAGATGGGGAGACG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600382 63 - 5823884 GACCACCAGGTCCCACAGGGAA----------TTTG-----------GGCAGAGCCCCT---CTGGGCAGGG---A---CAGATGGGGAGACG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81258 59 + 372756 G---ACCAGGCCCCACAGGGAA----------TTTG-----------GGCAGAGCCCC----CTGGGCAGGG---A---CAGATGGGGAGATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316395 59 + 16356641 G---ACCAGTCCCCCCAGGGAA----------TTTG-----------GGCAGAGCCCC----CTGGGCAGGG---T---CAGATGGGAAGATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185274 59 + 1231380 G---ACCAGGCCCCCCAGGGAA----------TTTG-----------GGCAGAGCCCC----CTGCGCAGGG---A---CAGACGGGGAGATG i cebCap1.NW_016107870v1 I 32 C 0 s aotNan1.NW_018500483v1 2716928 59 + 11732439 G---ACCAGGCACCACAGGGAA----------TTTG-----------GGCAGAGCCTG----CTGGGCAGGG---A---CAGATGGGGAGATG i aotNan1.NW_018500483v1 I 22 C 0 s micMur3.chr18 56902346 62 + 57149010 G---ACCCAGCCCCACAGGGAA----------TGTG-----------GGCAGAGCCCCT-TCCTGGGCAGGG---A---CAGATGGGAAGATG i micMur3.chr18 C 0 I 74 s proCoq1.NW_012150197v1 1893001 62 - 2029793 G---ACCCAGACCCACAGGGAA----------TGTG-----------GGCGGAGCCCCT-TCCTGGGCAGGG---A---CAGATGGGAAGATG i proCoq1.NW_012150197v1 C 0 I 51 s mm10.chr2 181823354 32 + 182113224 --------------------AA----------TC----------------------------AAGGGTAAAG---AAGTCAAATAGGAAAACA i mm10.chr2 C 0 C 0 s canFam3.chr24 47636205 47 + 47698779 G---ACCAGG-CCTGCAGGATC----------TGAG-----------GGCGGA---------------AAGC---A---CAGATGGGAAGGTG i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 304088 87 - 397369 G---GCCAGGCCCTGCAGGGGAGGGAATGGGCTTTGTAATGGTGTGAGGCAGAGTCCCTTTTGTGAACAGAGGGTA---CAGGTGGGAAAATG i dasNov3.JH569290 C 0 C 0 e otoGar3.GL873542 22880489 59 + 22939663 I a score=421916.000000 s hg38.chr20_KI270870v1_alt 146899 48 + 183433 GTGGCCTCCACC--AAGGCAGCAAAAAATGAGTAACATCCTCCAGCCCCA s panTro5.chr20 66482110 48 + 66533130 GTGGCCTCCACC--AAGGCAGCAAAAAATGAGTAACATCCTCCAGCCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149771 48 + 62195757 GTGGCCTCCACC--AAGGCAGCAAAAAATGAGTAACATCCTCCAGCCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536048 48 - 578057 GTGGCCTCCACC--AAGGCAGCAAAAAATGAGTAACATCCTCCAGCCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057763 48 - 110113093 GTGGCCTCCACC--AAGGCGGCAGAAAATGAGTAACATCCTCCTGCCCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795304 48 - 92844088 GCGGCCTCCACC--AAGGCGGCAGAAAATGAGTGACATACTCCAGCCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460821 48 + 96509753 GCGGCCTCCACC--AAGGCGGCAGAAAATGAGTGACATACTCCAGCCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932178 48 - 16982598 GCGGCCTCCACC--AAGGCGGCAGAAAATGAGTGACATACTCCAGCCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732754 48 - 3785965 GCGGCCTCCACC--AAGGCGGCAGAAAATGAGTGACATACTCCAGCCCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324581 48 - 90373283 GCGGCCTCCACC--AAGGCGGCAGAAAATGAGTGACATACTCCAGCCCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124416 48 - 179258 GCGGCCTCCACC--AAGGCAGCAGAAAATGAGTGACATACTCCAGCCCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600445 48 - 5823884 GCGGCCTCCACC--AAGGCGGCAGAAAATGAGTGACATAGTCTAGCCCCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81317 48 + 372756 GCGGCTTCCAAC--AAGGCTGCAGAATATGCGTGACACATTCCAGCCCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316454 47 + 16356641 GCGGCCTCCAGC---AGGCTGCAGAAGATGCGTGACACATTCCAGCCCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185333 48 + 1231380 GCGGCCTCCAAC--AAGGCTGCAGAAGATGCGTGACGTATTCCAGCCCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2716987 48 + 11732439 GCGGCCTCCAAC--AAGACTGCAGAAGATGCGGGACATGTTCCAGCCCCG i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181823386 41 + 182113224 ---GCCCCTTCCTGGAGGCAGCAGTCACAGCAGGTTTCATTCCA------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47636254 44 + 47698779 GAGGCCCCTTCCCAGAGGCTGCAGA------GTGACATGTGGGAGCCCCA i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 304175 10 - 397369 ---------------------------------------CTAAAGCCCC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893063 51 - 2029793 I e micMur3.chr18 56902408 74 + 57149010 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=84581.000000 s hg38.chr20_KI270870v1_alt 146947 7 + 183433 CGTGTCT s panTro5.chr20 66482158 7 + 66533130 CGTGTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149819 7 + 62195757 CGTGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536096 7 - 578057 CGTGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057811 7 - 110113093 CGTGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795352 7 - 92844088 TGTGTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460869 7 + 96509753 TGTGTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932226 7 - 16982598 TGTGTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732802 7 - 3785965 TGTGTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324629 7 - 90373283 TGTGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124464 7 - 179258 TGTGTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600493 7 - 5823884 CGTGTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81365 7 + 372756 CGTGTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316501 4 + 16356641 CGTG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185381 7 + 1231380 CGTGTCT i cebCap1.NW_016107870v1 C 0 I 4 s aotNan1.NW_018500483v1 2717035 7 + 11732439 CGTGTCT i aotNan1.NW_018500483v1 C 0 I 20 s proCoq1.NW_012150197v1 1893114 7 - 2029793 CGTGTCT i proCoq1.NW_012150197v1 I 51 C 0 s mm10.chr2 181823427 7 + 182113224 CATGTCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47636298 7 + 47698779 CGTGCCT i canFam3.chr24 C 0 C 0 e micMur3.chr18 56902408 74 + 57149010 I e dasNov3.JH569290 304185 0 - 397369 C e otoGar3.GL873542 22880489 59 + 22939663 I a score=138395.000000 s hg38.chr20_KI270870v1_alt 146954 82 + 183433 CATT---ACTCTGCTCTTGTCTCTACTGGCAAACAGG-----CTCAT------GTTGAC---TCTGCTCTGGTCTCTACTGGCAAACAGGCTCATGTTG s panTro5.chr20 66482165 82 + 66533130 CGTT---ACTCTGCTCTTGTCTCTACTGGCAAACAGG-----CTCAC------GTTGAC---TCTGCTCTGGTCTCTACTGGCAAACAGGCTCACGTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149826 82 + 62195757 CGTT---ACTCTGCTCTGGTCTCTACTGGCAAACAGG-----CTCAC------GTTGAC---TCTGCTCTGGTCTCTACTGGCAAACAGGCTCACGTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536103 85 - 578057 CGTTTTGACTCTGCTCTGGTCTCTACTGGCAAACAGG-----CTCAC------GTTGAC---TCTGCTCTGGTCTCTACTGGCAAACAGGCTCACGTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057818 45 - 110113093 CATT---ACTCTGCTCTTGTCTCTACTGGCAAACAGG-----CTCAC------GTTGAC---------------------------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795359 45 - 92844088 CGTT---ACTCTGCTCTTGTCACTAGTGGCCAACAGG-----CTCAC------GTTGAC---------------------------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460876 45 + 96509753 CGTT---ACTCTGCTCTTGTCTCTAGTGGCAAACAGG-----CTCAC------GTTGAC---------------------------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932233 45 - 16982598 CGTT---ACTCTGCTCTTGTCTCTACTGGCAAACAGG-----CTCAC------GTTGAC---------------------------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732809 45 - 3785965 CGTT---ACTCTGCTCTTGTCTCTACTGGCAAACAGG-----CTCAC------GTTGAC---------------------------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324636 45 - 90373283 CGTT---ACTCTGCTCTTGTCTCTACTGGCAAACAGG-----CTCAC------GTTGAC---------------------------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124471 45 - 179258 CGTT---ACTCTGCTCTTGTCTGTACTGGCAAACAAG-----CTCAC------GTTGAC---------------------------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600500 45 - 5823884 CGTT---ACTCTGCTCTTGTCTCTACTGGCAAACAGG-----CTCCC------GTGGAC---------------------------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81372 15 + 372756 TGTT---ACTCTGCTCTT--------------------------------------------------------------------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316505 4 + 16356641 --------------TCTT--------------------------------------------------------------------------------- i saiBol1.JH378156 C 0 C 0 s proCoq1.NW_012150197v1 1893121 39 - 2029793 TGTT---ACTCCGCTCTCTTCTCTGCTGGCAAACAGG-----CTCAT---------------------------------------------------- i proCoq1.NW_012150197v1 C 0 C 0 s mm10.chr2 181823434 29 + 182113224 TGAT---AATCTA---TCTTCTTTGTGGGCTAATG---------------------------------------------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47636305 47 + 47698779 TGTT---ATGCTGTTCCTTCCTCCATTGGCCAAGAAG---ATTTTAT------GCTGAC---------------------------------------- i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 304185 57 - 397369 --------------TTCTGGCTCCTACAGAAGACAGGTTTTTCTCACAACATTGTAGACGCACCTGCTTTG---------------------------- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56902408 74 + 57149010 I e cebCap1.NW_016107870v1 1185388 4 + 1231380 I e aotNan1.NW_018500483v1 2717042 20 + 11732439 I e otoGar3.GL873542 22880489 59 + 22939663 I a score=-1390.000000 s hg38.chr20_KI270870v1_alt 147036 1 + 183433 -A s panTro5.chr20 66482247 1 + 66533130 -A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149908 1 + 62195757 -A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536188 1 - 578057 -A i gorGor5.CYUI01015848v1 C 0 C 0 s cebCap1.NW_016107870v1 1185392 1 + 1231380 -A i cebCap1.NW_016107870v1 I 4 C 0 s dasNov3.JH569290 304242 1 - 397369 T- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893160 0 - 2029793 C e canFam3.chr24 47636352 3 + 47698779 I e cerAty1.NW_012001373v1 3732854 0 - 3785965 C e colAng1.NW_012114444v1 5600545 0 - 5823884 C e chlSab2.chr2 90324681 0 - 90373283 C e mm10.chr2 181823463 0 + 182113224 C e micMur3.chr18 56902408 74 + 57149010 I e manLeu1.NW_012101652v1 124516 0 - 179258 C e saiBol1.JH378156 16316509 0 + 16356641 C e macNem1.NW_012014244v1 16932278 0 - 16982598 C e calJac3.chrUn_GL286459 81387 0 + 372756 C e aotNan1.NW_018500483v1 2717042 20 + 11732439 I e nomLeu3.chr13 110057863 0 - 110113093 C e rheMac8.chr10 92795404 0 - 92844088 C e otoGar3.GL873542 22880489 59 + 22939663 I e macFas5.chr10 96460921 0 + 96509753 C a score=8961.000000 s hg38.chr20_KI270870v1_alt 147037 11 + 183433 --CTCTGCTCTGG s panTro5.chr20 66482248 11 + 66533130 --CTCTGCTCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149909 11 + 62195757 --CTCTGCTCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536189 11 - 578057 --CTCTGCTCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chrUn_GL286459 81387 1 + 372756 ------------G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316509 1 + 16356641 ------------G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185393 11 + 1231380 --CTCTGCTCTTG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22880548 11 + 22939663 --CTCTGCTCTTT i otoGar3.GL873542 I 59 C 0 s canFam3.chr24 47636355 11 + 47698779 --CCGTGCTCTGG i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 304243 13 - 397369 TTCAGTGCTCTTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893160 0 - 2029793 C e cerAty1.NW_012001373v1 3732854 0 - 3785965 C e colAng1.NW_012114444v1 5600545 0 - 5823884 C e chlSab2.chr2 90324681 0 - 90373283 C e mm10.chr2 181823463 0 + 182113224 C e micMur3.chr18 56902408 74 + 57149010 I e manLeu1.NW_012101652v1 124516 0 - 179258 C e macNem1.NW_012014244v1 16932278 0 - 16982598 C e aotNan1.NW_018500483v1 2717042 20 + 11732439 I e nomLeu3.chr13 110057863 0 - 110113093 C e rheMac8.chr10 92795404 0 - 92844088 C e macFas5.chr10 96460921 0 + 96509753 C a score=57838.000000 s hg38.chr20_KI270870v1_alt 147048 20 + 183433 TCTCTACTGGCAAACAGGCT s panTro5.chr20 66482259 20 + 66533130 TCTCTACTGGCAAACAGGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149920 20 + 62195757 TCTCTACTGGCAAACAGGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536200 20 - 578057 TCTCTACTGGCAAACAGGCT i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chrUn_GL286459 81388 20 + 372756 TTTCTACTGGCAAACAGGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316510 20 + 16356641 TTTCTACTGGCAAACAGGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185404 20 + 1231380 TTTCTACCGGCAAGCAGGCC i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56902482 20 + 57149010 TCTCTGCTGGCAAACAGGCT i micMur3.chr18 I 74 C 0 s otoGar3.GL873542 22880559 20 + 22939663 TCTTAACTGGGAAACAGGCT i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 304256 17 - 397369 TCTCCACTGGCAGTCTT--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893160 0 - 2029793 C e canFam3.chr24 47636366 0 + 47698779 C e cerAty1.NW_012001373v1 3732854 0 - 3785965 C e colAng1.NW_012114444v1 5600545 0 - 5823884 C e chlSab2.chr2 90324681 0 - 90373283 C e mm10.chr2 181823463 0 + 182113224 C e manLeu1.NW_012101652v1 124516 0 - 179258 C e macNem1.NW_012014244v1 16932278 0 - 16982598 C e aotNan1.NW_018500483v1 2717042 20 + 11732439 I e nomLeu3.chr13 110057863 0 - 110113093 C e rheMac8.chr10 92795404 0 - 92844088 C e macFas5.chr10 96460921 0 + 96509753 C a score=496997.000000 s hg38.chr20_KI270870v1_alt 147068 50 + 183433 CACGT-TGAC---------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC s panTro5.chr20 66482279 89 + 66533130 CACGT-TGACTCTGCTCTGGTCTCTACTGGCAAACAGGCTCACGTTGACC----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149940 50 + 62195757 CACGT-TGAC---------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536220 50 - 578057 CACGT-TGAC---------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057863 41 - 110113093 -------------------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795404 41 - 92844088 -------------------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460921 41 + 96509753 -------------------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932278 41 - 16982598 -------------------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732854 41 - 3785965 -------------------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324681 41 - 90373283 -------------------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124516 41 - 179258 -------------------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAATAGCATCACCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600545 41 - 5823884 -------------------------------------------------C----------GCTTGTTACTCAAGAGCCTGTATAAAAACAGCATCACCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81408 60 + 372756 CACGC-TGAC---------------------------------------CACTTATTACTGCTTATTACTCAAAAGCCTGTGTAAAGATAGCCTCACCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316530 50 + 16356641 CACGC-TGAC---------------------------------------C----------GCTTGTTACTCAAGAGGCTGTGTAAAAATAGCCTCACCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185424 50 + 1231380 CACGC-TGAC---------------------------------------C----------ACTTATTACTCAAGAGGCTGTGTAAAAATAGCCTCGCCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717062 50 + 11732439 CACGC-TGGC---------------------------------------C----------GCTTATTACTCAAGAGCCTGTGTGAAAACAGCCTCACCCC i aotNan1.NW_018500483v1 I 20 C 0 s micMur3.chr18 56902502 50 + 57149010 CCTGT-CGAC---------------------------------------C----------ACTCTTTACTCGAGAGCCTGCATAAAAATAGCATCACCCC i micMur3.chr18 C 0 I 144 s proCoq1.NW_012150197v1 1893160 46 - 2029793 ---GT-TGGC---------------------------------------C----------GCTTGTCACTCAGGAGCCTGCATAAAAATAGCATCACCC- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880579 47 + 22939663 AATGC-TGGC---------------------------------------C----------ACTTGTCACTCAACAGCCTGCATAAATATAGCACCTG--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823463 35 + 182113224 ---------C---------------------------------------C----------ATT------TCAAGAGGCTGTGTATATGTAGTAGCAGTC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47636366 27 + 47698779 -------------------------------------------------------------------------AAGCCGGTATAAAAATAGCATCAGCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304273 49 - 397369 --CATGTGAC---------------------------------------C----------TCTTTCTAATCAAAAGCCTGTGTGAGTATTGCATCTCTCA i dasNov3.JH569290 C 0 C 0 a score=331882.000000 s hg38.chr20_KI270870v1_alt 147118 32 + 183433 ACAGGGATCAGGAAGGATTTTCG-----CTGTCATGC s panTro5.chr20 66482368 32 + 66533130 ACAGGGATCAGGAAGGATTTTCG-----CTGTCATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62149990 32 + 62195757 ACAGGGATCAGGAAGGATTTTCG-----CTGTCATGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536270 28 - 578057 ACAA----CAGGAAGGATTTTCG-----CTGTCATGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057904 32 - 110113093 ACGGGGATCAGGAGGGATTTTCG-----CTGTCATGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795445 32 - 92844088 ACGGGGATCAGGAAGGATTTTCG-----TTGTCATGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460962 32 + 96509753 ACGGGGATCAGGAAGGATTTTCG-----TTGTCATGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932319 32 - 16982598 ACGGGGATCAGGAAGGATTTTCG-----TTGTCATGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732895 32 - 3785965 ACAGGGATCAGGAAGGATTTTCG-----TTGTCATGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324722 32 - 90373283 ACGGGGATCAGGAAGGATTTTCG-----TTGTCATGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124557 32 - 179258 ACAGGGATCAGGAAGGATTTTCG-----TTGTCATGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600586 32 - 5823884 GTGGGGATCAGGAAGGACTTTCG-----TCGTCATGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81468 32 + 372756 ACGGGGATCAGGAAGAGTTTTTG-----CTGTCATGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316580 31 + 16356641 ATGGGGATCAGGAAGGATTTTTG------TGTCATGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185474 32 + 1231380 ACGGAGATCAGGCAGGATTTTTG-----CTGTCATGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717112 31 + 11732439 ACGG-GATCAGGAAGGGTTTTTG-----CTGCCATGC i aotNan1.NW_018500483v1 C 0 I 115 s proCoq1.NW_012150197v1 1893206 34 - 2029793 GTGGTGATCCGGAAGGATTTTCACT---CTGTCATGC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880626 33 + 22939663 -ACAGACCCCAGGAATGTGTCCACT---CTGTCATGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823498 31 + 182113224 ATAGAG-TCAGGAAGAGTTTGTA-----CTATGAGTT i mm10.chr2 C 0 I 4 s canFam3.chr24 47636393 34 + 47698779 GTAGGGATCAGGAAGGATTTTCATT---CTGCCTCGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304322 20 - 397369 -----------------TGTGCACTCACCTGTTGTGC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56902552 144 + 57149010 I a score=109084.000000 s hg38.chr20_KI270870v1_alt 147150 11 + 183433 ACATGTCGATG s panTro5.chr20 66482400 11 + 66533130 GCATGTCGATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150022 11 + 62195757 GCATGTCGATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536298 11 - 578057 GCATGTCGATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057936 11 - 110113093 GCATGTCGATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795477 11 - 92844088 ACATGTCAATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96460994 11 + 96509753 ACATGTCAATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932351 11 - 16982598 ACATGTCAATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732927 11 - 3785965 ACATGTCAATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324754 11 - 90373283 ACATGTCAATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124589 11 - 179258 ACATGTCAATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600618 11 - 5823884 ACATGTCGCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81500 11 + 372756 ACATGGTGATG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316611 11 + 16356641 ACATGGTGATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185506 11 + 1231380 ACATGGCGATG i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1893240 11 - 2029793 ACATGTCGATG i proCoq1.NW_012150197v1 C 0 I 101 s otoGar3.GL873542 22880659 10 + 22939663 ACATGT-GGTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823533 11 + 182113224 ACATGTTGATG i mm10.chr2 I 4 I 2 s canFam3.chr24 47636427 1 + 47698779 --A-------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304342 11 - 397369 GTATGTAGATG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56902552 144 + 57149010 I e aotNan1.NW_018500483v1 2717143 115 + 11732439 I a score=790641.000000 s hg38.chr20_KI270870v1_alt 147161 126 + 183433 TT--GCATCCCCCCAGGTTCATAGGCAGTGACGACAGAGAA--GGAGTGAT-GG---------------------------------------------------------------------------CCCTCCCGGCGGAGCCATCCCCGTC-------------------------CCCTCCTG-GTGTCTC-TGAGTG-TGGAGATGC--ACTGT-TGTGTGGGTGT-CCATTT s panTro5.chr20 66482411 151 + 66533130 TT--GCATCCCCCCAGGTTCATAGGCAGTGACGACAGAGAA--GGAGTGAT-GG---------------------------------------------------------------------------CCCTCCCGGCGGAGCCATCCCCGTCTCCTCCCGGCGGAGCCATCCCCATCCCCTCCTG-GTGTCTC-TGAGTG-TGGAGATGC--ACTGT-TGTGTGGGTGT-CCATTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150033 151 + 62195757 TT--GCATCCCCCCAGGTTCATAGGCAGTGACGACAGAGAA--GGAGTGAT-GG---------------------------------------------------------------------------CCCTCCCGGCGGAGCCATCCCCGTCCCCTCCCGGCGGAGCCATCCTCATCCCCTCCTG-GTGTCTC-TGAGTG-TGGAGATGC--ACTGT-TGTGTGGGTGT-CCATTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536309 150 - 578057 TT--GCAT-CCCCCAGGTTCATAGGCAGTGACGACAGAGAA--GGAGTGAT-GG---------------------------------------------------------------------------CCCTCCCGGCGGAGCCATCCCCGTCCCCTCCCGGCGGAGCCATCCCCATCCCTTCCTG-GTGTCTC-TGAGTG-TGGAGATGC--ACTGT-TGTGTGGGTGT-CCATTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110057947 227 - 110113093 TT--GCATCCCCCCAGGTTCATAGGCAGTGACGACAGAGAA--GGAGTGAT-GGCCCTCCTGGCGGAGCCATCCCCGTCCCCTCCTGGCGGAGCCATCCCCGTCCCCTCCTGGTGGAGCCATCCCCGTCCCCTCCCGGCGGAGCCATCCCCGTCCCCTCCCGGCGGAGCCATCCCCGTCCCCTCCTG-GTGTCTC-TGAGTG-TGGAGATGC--ACTGT-TGTGTGGGTGTCCCATTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795488 127 - 92844088 CT--GCGTGCCCCCAGGTTCATAGGCAGTGACAACAGAGAA--GGGGTGAC-GG---------------------------------------------------------------------------CCCTCCTGGCAGAGCCATCCCCATC-------------------------CCCTCCTG-GTGTCTC-CGAGTG-TGGAGATGC--ACTGT-GGTATGGGTGTCCCACTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461005 127 + 96509753 CT--GCGTGCCCCCAGGTTCATAGGCAGTGACAACAGAGAA--GGGGTGAC-GG---------------------------------------------------------------------------CCCTCCTGGCAGAGCCATCCCCATC-------------------------CCCTCCTG-GTGTCTC-CGAGTG-TGGAGATGC--ACTGT-GGTATGGGTGTCCCACTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932362 127 - 16982598 CT--GCGTGCCCCCAGGTTCATAGGCAGTGACAACAGAGAA--GGGGTGAC-GG---------------------------------------------------------------------------CCCTCCTGGCAGAGCCATCCCCATC-------------------------CCCTCCTG-GTGTCTC-CGAGTA-TGGAGATGC--ACTGT-GGTATGGGTGTCCCACTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3732938 127 - 3785965 CT--GTGTGCCCCCAGGTTCATAGGCAGTGACAACAGAGAA--GGGGTGAC-GG---------------------------------------------------------------------------CCCTCCTGGCAGAGCCATCCCCATC-------------------------CCCTCCTG-GTGTCTC-CGAGTG-TGGAGATGC--ACTGT-TGTATGGGTGTCCCACTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324765 127 - 90373283 CT--GCGTGCCCCCAGGTTCATAGGCAGTGACAACAGAGAA--GGGGCGCC-GG---------------------------------------------------------------------------CCCCGCTGGCAGAGCCATCCCCATC-------------------------CCCTCCTG-GTGTCTC-CGAGTG-TGGAGATGC--ACTGT-CGTATGGGTGTCCCACTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124600 127 - 179258 CT--GCGTGCCCCCAGGTTCATAGGCAGTGACAACAGAGAA--GGGGTGAC-GG---------------------------------------------------------------------------CCCTCCTGGCAGAGCCATCCCCATC-------------------------CCCTCCTG-GTGTCTC-CGAGTG-TGGAGATGC--ACTGT-TGTATGGGTGTCCCACTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600629 127 - 5823884 CT--GCGTGCCCCCAGGCTCACAGGCAGTGGCGGCAGCGAA--GGGGTGGCTAA---------------------------------------------------------------------------CCCTCCTGGCAGAGCCATCCCCAT--------------------------CCCTCCTG-GTGTCTC-CGAGTG-TGGAGGTGC--ACTGT-TGTGTGGGTGTCCCACGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81511 124 + 372756 CCT-CCCTCCCCCGGGGTTCATAGGCAGTGACAGCAGGGAA--GGAGGGGT-GG---------------------------------------------------------------------------CTGTCCTGGCAGGGCTGTCCCCGTC-------------------------CCCTCATG-GTGTCTC--------TGGAGATGCAGAGTGT-AGTGTGGGTGTCCCACTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316622 123 + 16356641 CC--ACCTCCCCCGGGGTTCACAGGCAGTGACAGCAGGGAA--GGAGGGGT-GG---------------------------------------------------------------------------CTCTCCCGGTGGGGCTGTCCCCGTC-------------------------CCCTCATG-GTGTCTC--------TGGAGACGCAGAGTGT-GGTGTGGGTGCCCCAGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185517 121 + 1231380 CC----CCTCCCTGGGGTTCACAGGCAGTGACGGCAGGGAA--GGAGGGGT-GG---------------------------------------------------------------------------CTCTCCCGGTGGGGCTGTCCCCGTC-------------------------CCCTCTTG-GTGTCTC--------TGGAGATGCAGAGTGT-GGTGTGGGTGCCCCACTT i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22880669 84 + 22939663 --TAGCAT--CCCCAGGTTCA-------------------------------GA--------------------------------------------------------------------------------------GAACTGTGTCCGTC-------------------------TCCTAATG-ATGTCTCTTGGGTG-TAGAGATAT--A--GC-ACTGTGGGGGTTGCACC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823546 112 + 182113224 TT--GTTGTCTTCCAGGACCACTGGAGGTGACAACA--GAA--GGCACAG--AG---------------------------------------------------------------------------TCATTTAGCTGGGATCATCACTGTT-------------------------CTTTACCT-GTGTCTC-CAAATA----AGACAC--TGAAC-AGTATAGGT--------- i mm10.chr2 I 2 C 0 s canFam3.chr24 47636428 85 + 47698779 ---GCAGCTTCCCCAGGTTCACGGGCAGTGGAAGCAG---A--GGAGTGTT-GG--------------------------------------------------------------------------------------------------------------------------------------GCACCTC-AGGGTG-CCGAGACAC--ATCAC-TGTGTGACTG--CCA--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304353 130 - 397369 ------------CAGCGTTTCAGAGCAGCAAAAGCACGGGATGGGGGTGAC-AG-------------------------------------------------------------------AGTCGGGTGTCTCCTGTCTGGGCCCTTCTCCAG-------------------------TCTTCTGGAGAGTCTC-TGGCTGCTGGAGACAC--AATGTCTGTGGGGCTGGCAGGATT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893251 101 - 2029793 I e micMur3.chr18 56902552 144 + 57149010 I e aotNan1.NW_018500483v1 2717143 115 + 11732439 I a score=56143.000000 s hg38.chr20_KI270870v1_alt 147287 6 + 183433 TGTG-CT s panTro5.chr20 66482562 6 + 66533130 TGTG-CT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150184 6 + 62195757 TGTG-CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536459 6 - 578057 TGTG-CT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058174 6 - 110113093 TGTG-CT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795615 6 - 92844088 TGTG-CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461132 6 + 96509753 TGTG-CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932489 6 - 16982598 TGTG-CT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733065 6 - 3785965 TGTG-CT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324892 6 - 90373283 TGTG-CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124727 6 - 179258 TGTG-CT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600756 6 - 5823884 TGTG-CT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81635 6 + 372756 TGTGCC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316745 4 + 16356641 TGTG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185638 5 + 1231380 TGTG-C- i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56902696 6 + 57149010 TGTG-CT i micMur3.chr18 I 144 C 0 s proCoq1.NW_012150197v1 1893352 6 - 2029793 TGTG-CT i proCoq1.NW_012150197v1 I 101 C 0 s otoGar3.GL873542 22880753 6 + 22939663 TGTG-TT i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 304483 6 - 397369 TGTT-CT i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47636513 0 + 47698779 C e mm10.chr2 181823658 0 + 182113224 C e aotNan1.NW_018500483v1 2717143 115 + 11732439 I a score=293055.000000 s hg38.chr20_KI270870v1_alt 147293 20 + 183433 CCCTGCTCCTCCCCTTCTCA s panTro5.chr20 66482568 20 + 66533130 CCCTGCTCCTCCCCTTCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150190 20 + 62195757 CCCTGCTCCTCCCCTTCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536465 20 - 578057 CCCTGCTCCTCCCCTTCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058180 20 - 110113093 CTCGGCTCCTCCCCTTCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795621 20 - 92844088 CCCTGCTCCTCCCCTTCTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461138 20 + 96509753 CCCTGCTCCTCCCCTTCTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932495 20 - 16982598 CCCTGCTCCTCCCCTTCTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733071 20 - 3785965 CGCTGCTCCTCCCCTTCTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324898 20 - 90373283 CCCTGCTCCTCCCCTTCTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124733 20 - 179258 CGCTGCTCCTCCCCTTCTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600762 20 - 5823884 CCCTGCTCCTCCCCTTCTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81641 20 + 372756 CCCTGCTCCTCCCCTTCTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316749 10 + 16356641 ----------CCCCTTCTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185643 20 + 1231380 CCCTGCTCCTTCCCTTCTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717258 20 + 11732439 CCCTGCTCCTCCCCTTCTCA i aotNan1.NW_018500483v1 I 115 C 0 s micMur3.chr18 56902702 20 + 57149010 CCCTGCTCCTTCCCTTCTCA i micMur3.chr18 C 0 I 22 s proCoq1.NW_012150197v1 1893358 20 - 2029793 CCCTGCTCCTTCCCTTCTCA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880759 20 + 22939663 CCCTGCTCCTTTCCTTCTCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823658 9 + 182113224 -----------CCTCTCTCA i mm10.chr2 C 0 C 0 s canFam3.chr24 47636513 19 + 47698779 CCCTG-TCTCTCCCTTCCCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304489 6 - 397369 ------------CCTTCA-- i dasNov3.JH569290 C 0 C 0 a score=103760.000000 s hg38.chr20_KI270870v1_alt 147313 8 + 183433 GAGTCCCC s panTro5.chr20 66482588 8 + 66533130 GAGTCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150210 8 + 62195757 GAGTCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536485 8 - 578057 GAGTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058200 8 - 110113093 AAGTTCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795641 8 - 92844088 AAGTCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461158 8 + 96509753 AAGTCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932515 8 - 16982598 AAGTCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733091 8 - 3785965 AAGTCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324918 8 - 90373283 AAGTCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124753 8 - 179258 AAGTCCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600782 8 - 5823884 GAGTCCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81661 8 + 372756 AAGTCCTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316759 8 + 16356641 AAGTCCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185663 8 + 1231380 AAGTCCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717278 8 + 11732439 AAGTCCTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1893378 8 - 2029793 AGGCCCCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880779 8 + 22939663 ACATCCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823667 8 + 182113224 GAGTCCCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47636532 8 + 47698779 AAGTAACC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304495 8 - 397369 GAGTCTCA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56902722 22 + 57149010 I a score=1276285.000000 s hg38.chr20_KI270870v1_alt 147321 98 + 183433 AGGGCCTTCA------TCAGTGTCAGTGTCGTTGGGGTAGCACCTCTGATTTCTTTTTATTTGCC---AAAACCAATCTTTTTAA---AGACAG-ATTATTACCTTTTACT s panTro5.chr20 66482596 98 + 66533130 AGGGCCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTTTTTATTTGCC---AAAACCAATCTTTTTAA---AGACAG-ATTATTACCTTTTACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150218 98 + 62195757 AGGGCCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTTTTTATTTGCC---AAAACCAATCTTTTTAA---AGACAG-ATTATTACCTTTTACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536493 98 - 578057 AGGGCCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTTTTTATTTGCC---AAAACCAATCTTTTTAA---AGACAG-ATTATTACCTTTTACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058208 98 - 110113093 AGGGCCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTCTTTATTTGCC---AAAGCCAATCTTTTTAA---AGACAG-ATCATTACCTTTTACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795649 98 - 92844088 AGAGCCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTCTTTATTTGCC---AAAACAAATCTTTTTAA---AGACAA-ATTATTACCTTTTACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461166 98 + 96509753 AGAGCCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTCTTTATTTGCC---AAAACAAATCTTTTTAA---AGACAA-ATTATTACCTTTTACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932523 104 - 16982598 AGAGCCTTCATCAGTGTCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTCTTTATTTGCC---AAAACAAATCTTTTTAA---AGACAA-ATTATTACCTTTTACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733099 98 - 3785965 AGAGCCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTCTTTATTTGCC---AAAACCAATCTTTTTAA---AGACAA-ATTATTACCTTTTACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90324926 98 - 90373283 AGAGCCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTCTTTATTTGCC---AAAACCAATCTTTTTAA---AGACAA-ATTATTACCTTTCACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124761 98 - 179258 AGAGCCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTCTTTATTTGCC---AAAACCAATCTTTTTAA---AGACAA-ATTATTACCTTTTACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600790 98 - 5823884 AGAGGCTTCA------TCAGTGTCAGTGTCCTTGGGGTAGCACCTCTGATTTCTCTTTATTTGCC---AAAAGCAATCTTTTTAA---AGACAG-ATTATTACCTTTTACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81669 97 + 372756 AGGGCCCTCA------TCAGTGTCTGTGTCCTC-GGATAGCACCTTAGATTTCTCTTTATTTGCC---GAAACCAATCTTTTTAA---GGACAG-ATGATTACCTTTTACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316767 97 + 16356641 AGGGCCCTCA------TCAGTGTCTGTGCCCTCGGGATAGCACCTCGGATTTCTCTTTATTTGCC----AAACCAGTCTTTTTAA---AGACAG-ATGATTACCTTTTACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185671 95 + 1231380 AGGGCCCTCG------TCGGTGCCTGTGCCCTCGAGATAGCACCTCGAATTTCTCTTTATTTGCC----AACCCAATC--TTTAA---AGACAG-ATGATTACCTTTTCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717286 97 + 11732439 GGGGCCCTCG------TCAGTGTCCGTGTCCTCGGGATAGCACCTCGGATTTCTCTTTATTTGCC----AAACCAATCTTTTTAA---AGACAG-ACGATTACCTTTAACT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56902744 101 + 57149010 AGGGCCCTCA------TCAGCATCAGTGTCCCTGGGACAGCACCTCTGGTTTCTCGATATTTGCCAAGAAGACCAATCTTTTTGC---AGACAG-AGCGCTGCCTTTCACT i micMur3.chr18 I 22 C 0 s proCoq1.NW_012150197v1 1893386 97 - 2029793 CGGGCCCTTA------TCAGCATCAGTGTCCTT-GGCCAGCACCTCTGATTTCTCGTTATTTGCC---AAGACCAGTCTTCCTAG---AGACAG-ATCACTACCTTTCACT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880787 98 + 22939663 GGGGCCCTTA------TCAGTCTTAGTGTCCTTAGGGTAACATCTCTGGTTTTTCATTATTTTCC---AAAAGCAATCTTTTAAA---AGACAG-ATCACTACCTTTCACT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181823675 83 + 182113224 AGAGCCTTCA------------------ACCTTGTGGTAGCACCTCTTATTTCTC--TATTTGCC---AGATGTCATATTTTTA----AGACAG-TTTTTTTTttgttgtt i mm10.chr2 C 0 I 876 s canFam3.chr24 47636540 54 + 47698779 -------------------------------TTGGGGCAACACCTCTGATTTTTTTT--TTTCCT---GATTTCCACCTTTTTA---------------------TTTACT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304503 95 - 397369 AGGGCCCT-A------CTGATGTCAACATCTT--GGGTAGCACGTTAAATTTCTCTGTATTTGTC---AATAATCATCTGGTCAATGTGGACGATGTGATTGTCATA---- i dasNov3.JH569290 C 0 C 0 a score=490275.000000 s hg38.chr20_KI270870v1_alt 147419 36 + 183433 AGCATCCCTTT-GGAAGGACTCAGAAACC--CCTGTCCA s panTro5.chr20 66482694 36 + 66533130 AGCATCCCTTT-GGAAGGACTCAGAAACC--CCTGTCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150316 36 + 62195757 AGCATCCCTTT-GGAAGGACTCAGAAACC--CCTGTCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536591 36 - 578057 AGCATCCCTTT-GGAAGGACTCAGAAACC--CCTGTCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058306 36 - 110113093 AGCATCCCTTT-GGAAGGACTCAAAAACC--CCTGTCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795747 36 - 92844088 GGCATCCCTTT-GGAAGGACTCAGAAGCC--CCTGTCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461264 36 + 96509753 GGCATCCCTTT-GGAAGGACTCAGAAGCC--CCTGTCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932627 36 - 16982598 GGCATCCCTTT-GGAAGGACTCAGAAGCC--CCTGTCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733197 36 - 3785965 GGCATCCCTTT-GGAAGGACTCAGAAGCC--CCTGTCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325024 36 - 90373283 GGCATCCTTTT-GGAAGGACTCAGAAGCC--CCTGTCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124859 36 - 179258 GGCATCCCTTT-GGAAGGACTCAGAAGCC--CCTGTCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600888 36 - 5823884 GGCATCCCTTC-GGAAGGACTCAGAAGCC--CCTGTCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81766 36 + 372756 AGCATCCCTTT-GGAAGGACTCAGAAGCG--CCTGTCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316864 36 + 16356641 AGCATCCGTTT-GGAAGGACTCAGAAGTG--CCTGTGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185766 36 + 1231380 AGCATCCCTTT-GGAAGGACTCAGAAGCG--CCTGTCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717383 36 + 11732439 AGCATCCCTTT-GGAAGGACTCAGAAGCG--CCCGTCCG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56902845 37 + 57149010 -GCATCCCTCT-GGAAGGACTCAGAAGCCTGCCTGTCCC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1893483 37 - 2029793 GGCATCCCTTT-GGAAGGACTCAGAAGCCC-CCTGTCCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22880885 35 + 22939663 GGAATCCCTTT-GGAAGGACTCAGAGGC---CCAGTCAC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47636594 34 + 47698779 AGCATCCTCTT-GGACTGTCTCAGACCCT--CCTCTA-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304598 29 - 397369 AGCTTTCTTTGAGGGAGCGCCTGGAATCC---------- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181823758 876 + 182113224 I a score=899127.000000 s hg38.chr20_KI270870v1_alt 147455 63 + 183433 TCTGAGGGAGTTTGGTGACTGGTGCCCTCTGCGGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC s panTro5.chr20 66482730 63 + 66533130 TTTGAGGGAGTTTGGTGACTGGTGCCCTCTGCGGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150352 63 + 62195757 TTTGAGGGAGTTTGGTGACTGGTGCCCTCTGCGGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536627 63 - 578057 TTTGAGGGAGTTTGGTGACTGGTGCCCTCTGCGGAAGGGCAAAGGCAAAGGGAAGGCGGGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058342 63 - 110113093 TTTGAGGGAGTTTGGTGACTGCTGCCCTCTGCGGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795783 63 - 92844088 TTTGAGGGAGTTTGGTGAGTGGTGTCCTCTGCAGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461300 63 + 96509753 TTTGAGGGAGTTTGGTGAGTGGTGTCCTCTGCAGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932663 63 - 16982598 TTTGAGGGAGTTTGGTGAGTGGTGTCCTCTGCAGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733233 63 - 3785965 TTTGAGGGAGTTTGGTGAGTGGTGTCCTCTGCAGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325060 63 - 90373283 CTTGAGGGAGTTTGGTGAGTGGTGTCCTCTGCAGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124895 63 - 179258 TTTGAGGGAGTTTGGTGAGTGGTGTCCTCTGCAGAAGGGCAAAGGCAAAGGGAAGGCAGGTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600924 63 - 5823884 TCTGAGGGAATTTGGTGAGTGGTGTCCTCTGCAGCAGGGCAAAGGCAAAGGGAAGGCAGGTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81802 56 + 372756 TTTGAGGGAGTTTGGCGAGTGGTACCCTCTGCAG-------AAGGCAAAGTGAAGGCAGGTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316900 63 + 16356641 TTTGAGGGAGTTTGGCGAGCGGTACCCTCTGCGGAAGGGCAAAGGCAAAGTGAAGGCAGGTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185802 63 + 1231380 TTTGAGGGAGTCTGGCGAGTGGTACCCTCGGTGGAAGGGCAAAGGCAGAATGAAGGCAGGTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717419 63 + 11732439 TTAGAGGGAGTTTGGCGAGTGGTACCCTCTGGGGAAGCGCAAAGGCAAAGTGAAGGCAGGTCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56902882 63 + 57149010 TTTGAGGGAGCATGGCGAGTGGCACCTGCTCCAGAAGGGCAAAGGCCAAGAGAAGGCAGGTCC i micMur3.chr18 C 0 I 128 s proCoq1.NW_012150197v1 1893520 63 - 2029793 TTTGAGGGAGCCTGGTGAGTGGCACCCTCTCCAGAAGGGCGAAGGCAAGGAGAAGGCAGGTCC i proCoq1.NW_012150197v1 C 0 I 122 s otoGar3.GL873542 22880920 63 + 22939663 TCTGACAGAGTTTGGTGAGGGCTGCCCTCTCTGGAAGGGTAAAGGCGAAGAGAAATCAGGTCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181824634 56 + 182113224 TCTGAGGGCACTCCATG-------CCTGCTGTGGAAAGGCCAAAGAAGAAGGAATGCAGGTCT i mm10.chr2 I 876 C 0 s canFam3.chr24 47636628 56 + 47698779 ---GAGGGAGTTT--TGGGTCCTGTGCTCTGCAGAAAGGCTCCG--CAAGAGTACGCAAGCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304627 40 - 397369 ----------------------TGTGCTCTGTGGTAGGGCAAAGGCAAAGC-CAGACAGGCCC i dasNov3.JH569290 C 0 C 0 a score=1012573.000000 s hg38.chr20_KI270870v1_alt 147518 109 + 183433 -CTATCCCCCATGCAACCC-----TTTCA-AAGCCACATGCTTGTCA-------------------------CCAG----------------------------GTGGCAGA--------------AGAAGCGTGCTTGACCCCATCCACAGCCTC-CCAGGAATGAGCTCCCCACTCCT-------------GCCT s panTro5.chr20 66482793 109 + 66533130 -CTATCCCCCATGCAACCC-----TTTCA-AAGCCACATGCTTGTCA-------------------------CCAG----------------------------GTGGCAGA--------------AGAAGCGTGCTTGACCCCATCCACAGCCTC-CCAGGAATGAGCTCCCCACTCCT-------------GCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150415 109 + 62195757 -CTATCCCCCATGCAACCC-----TTTCA-AAGCCACATGCTTGTCA-------------------------CCAG----------------------------GTGGCAGA--------------AGAAGCGTGCTTGACCCCATCCACAGCCTC-CCAGGAATGAGCTCCCCACTCCT-------------GCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536690 109 - 578057 -CTATCCCCCATGCAACCC-----TTTCA-AAGCCACATGCTTGTCA-------------------------CCAG----------------------------GTGGCAGA--------------AGAAGCATGCTTGACCCCATCCACAGCCTC-CCAAGAATGAGCTCCCCACTCCT-------------GCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058405 109 - 110113093 -CTATCCCCCATGCAACCC-----TTTCA-AAGCCACATGCTTGTCA-------------------------CCAG----------------------------GTGGCAGA--------------AGAAGCATGCTTGACCCCATCCACAGCCTC-CCAGGAAGGAGCTCCCCACTCCT-------------GCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795846 99 - 92844088 -CTGTCTCCCATGCAACCC-----TTTCA-GAGCCACATGCTTGTCG-------------------------CCAG----------------------------GCGGCAGA--------------AGAAGCGTGCTTGACCCCATCCACAGCCTC-CCAGGAAGGAG----------CT-------------GCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461363 109 + 96509753 -CTGTCTCCCATGCAACCC-----TTTCA-GAGCCACATGCTTGTCG-------------------------CCAG----------------------------GCGGCAGA--------------AGAAGCGTGCTTGACCCCATCCACAGCCTC-CCAGGAAGGAGCTCACCACTCCT-------------GCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932726 106 - 16982598 -CTGTCTCCCATGCAACCC-----TTTCA-GAGCCACATGCTTGTCG-------------------------CCAG----------------------------GTGGC-----------------AGAAGCGTGCTTGATCCCATCCACAGCCTC-CCAGGAAGGAGCTCACCACTCCT-------------GCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733296 109 - 3785965 -CTGTCTCCCATGCAACCC-----TTTCA-GAGCCACATGCTTGTCG-------------------------CCAG----------------------------GCGGCAGA--------------AGAAGCGTGCTTGACCCCATCCACAGCCTC-CCAGGAAGGAGCTCACCACTCCT-------------GCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325123 109 - 90373283 -CTGTCTCCCACGCAACCC-----TTTCA-GAGCCACATGCTTGTCG-------------------------CCAG----------------------------GTGGCAGA--------------AGAAGCGTGCTTGACCCCATCCACAGCCTC-CCAGGAAGGAGCTCACCACTCCT-------------GCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 124958 109 - 179258 -CTGTCTCCCATGCAACCC-----TTTCA-GAGCCACATGCTTGTCG-------------------------CCAG----------------------------GCGGCAGA--------------AGAAGCGTGCTTGACCCCATCCACAGCCTC-CCGGGAAGGAGCTCACCACTCCT-------------GCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5600987 109 - 5823884 -CTGTCCCCCATGCATCCC-----TTTCA-AAGCCACATGCTTGTCG-------------------------CCAG----------------------------GTGGCAGA--------------ATAAGCGTGCTTGACCCCATCCACAGCCTC-CCAGGAAGGAGCTCACCACTCCT-------------GCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81858 109 + 372756 -CTGTCCCCCATGCAACCA-----TTTCA-AAGCCACATGCTTATCA-------------------------CCAG----------------------------GTGGCGGA--------------AGAAGCGTGCTTGGCCCCATCCACAGCTTC-CCAGGAAGGAGCTCACCACTCCT-------------GCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16316963 109 + 16356641 -CTATCCCCCATGCAACCC-----TTTCA-AAGCCACATGCTCGTCA-------------------------CCAG----------------------------GTGGCAGA--------------AGAAGCGGGCTTGGCCCCATCCACAGCCTC-CCAGGAAGGAGGCCACCACTCCT-------------GCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185865 109 + 1231380 -CTATCTCCCATGCAGCCC-----TTTCA-AAGCCACATGCTTGTCA-------------------------CCAG----------------------------GTGGAAGA--------------AGAAGCACGCTTGGCCCCATCCACAGCCTC-CCAGGAAGGAGCTCAGCACTCCT-------------GCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717482 81 + 11732439 -CCATCCCCCATGCAACCC-----TTTCA-AAGCCACAT-----------------------------------------------------------------------------------------------GCTTGGCCCCATCCACAGCCTC-CCAGGAAGGAGCTCAGCACTCCT-------------GCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22880983 106 + 22939663 -TTCTCTGCCA--CAACTCCTTTATTTTA-AAGTGCCCTGCTTGCTA-------------------------TTCA----------------------------CTGACAAA--------------AGAGG---GCTTGA-CCTGTCCACAGCCCCACCAGGAGGGTGCTTGGC---CCT-------------GCAC i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181824690 62 + 182113224 --------------------------CTA-GAACTACTT--TAGTCA-------------------------CCAC----------------------------AGAGCA-------------------------------------TTCAGCCTC-ACCTG--GGAGCTCACTGTCCTT-------------GTTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47636684 134 + 47698779 -CTAACTCCCACTCAAACT-----GTTTT-AAGCCAAAGACTTCTTA-------------------------CCAAGTGAAGAAGTGCAATGCTTCCCAGCCACGTGGTTGG--------------AGGAAAGCACTCTTTCCCATCCACCGCCTC-CTC------ACCTTTCTGCACCT--------AGG--GCAT i canFam3.chr24 C 0 I 5 s dasNov3.JH569290 304667 154 - 397369 CCAGGCGCCTATGTAATCC-----TTTTATGATCAAGGTGCTGGTCAGTCAGATTCTGTAAGTGCAGTGTGCCCAA----------------------------GTCACAGAGCCTCGTAATTGGGAGGAAAGTGTTCAACCTTGTCCATAGCCCC-CAGGGTG---------CATTCCTTACGTTGGAGGTAGCGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893583 122 - 2029793 I e micMur3.chr18 56902945 128 + 57149010 I a score=305607.000000 s hg38.chr20_KI270870v1_alt 147627 31 + 183433 CGTGTGTCACCCACACTGTCTTTCTGTGAGT s panTro5.chr20 66482902 31 + 66533130 CGTGTGTCACCCACACTGTCTTTCTGTGAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150524 31 + 62195757 CGTGTGTCACCCACACTGTCTTTCTGTGAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536799 31 - 578057 CGTGTGTCACCCACACTGTCTTTCTGTGAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058514 31 - 110113093 CGTGTGTCACCCACACTGTCTTTCTGTGAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795945 31 - 92844088 CGTGTGTCACCCACACTGTCTTTCTGTGAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461472 31 + 96509753 CGTGTGTCACCCACACTGTCTTTCTGTGAGT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733405 31 - 3785965 TGTGTGTCACCCACACTGTCTTTCTGTGAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325232 31 - 90373283 CGTGTGTCACCCACACTGTCTTTCCGTGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125067 31 - 179258 TGTGTGTCACCCACACTGTCTTTCTGTGAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601096 31 - 5823884 CGTGTGTCACCCACACTGTCTGTCTGTGAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81967 31 + 372756 CGTGTGTCACACACACTGTCTTCCTGTGAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317072 31 + 16356641 CGAGTGTCACACACACTGTCTTCCTGTGAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1185974 31 + 1231380 CGAGTGTCACACACACTGTCTTCCTGTGAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717563 30 + 11732439 TGAGTGTCACACACACTGTCTTCCTGTGAG- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22881090 26 + 22939663 TGTGGGCCATACACATGGTCT-----TGGGC i otoGar3.GL873542 I 1 I 2 s mm10.chr2 181824752 27 + 182113224 --CACATCA--CACATTGTCTTCTCATGCGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47636823 25 + 47698779 AGCGTGCCACGCACATTGTGTGACT------ i canFam3.chr24 I 5 C 0 s dasNov3.JH569290 304821 31 - 397369 GGCACTTTGCACACATTGTCTCTGTGGGAGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893583 122 - 2029793 I e micMur3.chr18 56902945 128 + 57149010 I e macNem1.NW_012014244v1 16932832 0 - 16982598 C a score=616766.000000 s hg38.chr20_KI270870v1_alt 147658 77 + 183433 ----TTAGCCTCTGCCCCCGTGGCTCC-----CTGCAGATGTGCAGTC--AGGCTGG----GGGCT------------------------------ATTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG s panTro5.chr20 66482933 77 + 66533130 ----TTAGCCTCTGCCCCCGTGGCTCC-----CTGCAGATGTGCAGTC--AGGCTGG----GGGCT------------------------------ATTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150555 77 + 62195757 ----TTAGCCTCTGCCCCCGTGGCTCC-----CTGCAGATGTGCAGTC--AGGCTGG----GGGCT------------------------------ATTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536830 77 - 578057 ----TTAGCCTCTGCCCCCGTGGCTCC-----CTGCAGATGTGCAGTC--AGGCTGG----GGGCT------------------------------ATTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058545 77 - 110113093 ----TTAGCCTCTGCCCCCATGGCTCC-----CTGCAGATGTGCAGTC--AGGCTAG----GGGCT------------------------------ATTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92795976 68 - 92844088 ----GTAGCCTCTGCCCCCACGGCTCC-----CTGCAGA-----------TGGCTGG----CGGCT------------------------------GTTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461503 68 + 96509753 ----GTAGCCTCTGCCCCCACGGCTCC-----CTGCAGA-----------TGGCTGG----CGGCT------------------------------GTTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733436 68 - 3785965 ----GTAGCCTCTGCCCCCACGGCTCC-----CTGCAGA-----------TGGCTGG----CGGCT------------------------------GTTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325263 77 - 90373283 ----GTAGCCTCTGCCCCCACGGCTCC-----CTGCAGATGTACAGTC--TGGCTGG----CAGCT------------------------------GTTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125098 68 - 179258 ----GTAGCCTCTGCCCCCACGGCTCC-----CTGCAGA-----------TGGCTGG----CGGCT------------------------------GTTC-----------CTGGACACCAAAGGC---------------------------CTCAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601127 77 - 5823884 ----TTAGCCTCTGCCCGCACGGCTCC-----CTGCAGATGTGCAGTC--CGGCTGG----CGGCT------------------------------ATTC-----------CTGGACACCAAAAGC---------------------------CTCAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 81998 69 + 372756 ----TTAGTTTCTGCCTCTGTGGCTCC-----CTGAAGATAGACGGTC--AGCCTGG----GGGCT------------------------------ATCC-----------CTGGACGCAAAAGG----------------------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317103 74 + 16356641 ----CTAGCCTCCACATCCATGGCTCC-----CTGCAGATACACAGTC--AGCCTGG----GGGCT------------------------------ATCC-----------CTGGATGCCAAAGGG---------------------------TTCA--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186005 74 + 1231380 ----TTAGCCTCCGTATCCATGGCTCC-----CTGCAGATATACAGTC--AGCCTGG----GGGCT------------------------------AACC-----------CTGGACACCAAAGGG---------------------------TTCA--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717593 69 + 11732439 ----TTAGGCTTCGCATCCGTGGCTCC-----CTGCGGATATACAGTC--AGCCCGG----GGGCT------------------------------ACCC-----------CTGGACACCAAAGG----------------------------------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56903073 76 + 57149010 ----TTAGCCTCTGACCCCACGGCTCC-----TTGGAGAGGTGCAGTC--AGGCT-G----GGGCT------------------------------GTCC-----------CTTGATATCAAAGGC---------------------------CTCAGGG i micMur3.chr18 I 128 C 0 s proCoq1.NW_012150197v1 1893705 77 - 2029793 ----TTAGCCTCTGCCCCCAAGGCTCC-----TTGGAGAGGTGCGGTC--GGGCTGG----GGGCT------------------------------GTCC-----------CTTGACACCAGAGGC---------------------------TTCAGGG i proCoq1.NW_012150197v1 I 122 I 328 s otoGar3.GL873542 22881118 53 + 22939663 ----TTAGCCTCTGCCCCTGAGGTTCC-----TTGAAGATGGACAGTC--AGGCT-G----GGG-------------------------------------------------------------------------------------------CAGGG i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181824779 69 + 182113224 ----TCAGTCTTTC--------ACTCC-----TTGGAAACAAATAGTT--AAGCTAG----GGACT------------------------------GACC-----------TTTAATGCCAGAAAT---------------------------CCCAGAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47636848 85 + 47698779 ------TGCCTCTGCCTCCA-GCCTCC-----CCTGAGA--TGCGGTC--AGATTGGGGCAGGGCC------------------------------TCCCAAGCATGTCTTCTCCACACCAA--GC---------------------------CCCAGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 304852 145 - 397369 TTGGGTAGCATCTGTCCCCAGGGTGCCAGCCTTTCGAGAAGTACCATCAAAAGTTGC----CAGCCTTTCAAGACATACCGTCTTCAGAGTTGATGGTCC-----------CTCAACACTGAAGGCAGCTGCTAGGCCCTCCTGGCGTGTCTTCTCAGGA i dasNov3.JH569290 C 0 C 0 e macNem1.NW_012014244v1 16932832 0 - 16982598 C a score=38545.000000 s hg38.chr20_KI270870v1_alt 147735 5 + 183433 CCAAC s panTro5.chr20 66483010 5 + 66533130 CCAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150632 5 + 62195757 CCAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536907 5 - 578057 CCAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058622 5 - 110113093 CCAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92796044 5 - 92844088 CCAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461571 5 + 96509753 CCAAC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733504 5 - 3785965 CCAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325340 5 - 90373283 CCAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125166 5 - 179258 CCAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601204 5 - 5823884 CCAAC i colAng1.NW_012114444v1 C 0 C 0 s micMur3.chr18 56903149 5 + 57149010 CCAGC i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22881171 5 + 22939663 CCAGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181824848 5 + 182113224 ACAAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47636933 5 + 47698779 CAGGC i canFam3.chr24 C 0 I 243 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e dasNov3.JH569290 304997 0 - 397369 C e saiBol1.JH378156 16317177 0 + 16356641 C e macNem1.NW_012014244v1 16932832 0 - 16982598 C e cebCap1.NW_016107870v1 1186079 0 + 1231380 C e calJac3.chrUn_GL286459 82067 0 + 372756 C e aotNan1.NW_018500483v1 2717662 0 + 11732439 C a score=606371.000000 s hg38.chr20_KI270870v1_alt 147740 65 + 183433 ACAACCCTGGGCA---------GGTTCACCGCCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTAGTTGGCCTGGG s panTro5.chr20 66483015 65 + 66533130 ACAACCCTGGGCA---------GGTTCACCGCCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTAGTTGGCCTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150637 65 + 62195757 ACAACCCTGGGCA---------GGTTCACCGCCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTAGTTGGCCTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536912 65 - 578057 ACAACCCTGGGCA---------GGTTCACCGCCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTAGTTGGCCTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058627 63 - 110113093 AC--CTCAGGGCA---------GGTTCACCACCATGGTGGGGAA---GTGAGAAGACTTG-------------TCTGTAGTTGGCCTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92796049 65 - 92844088 GAGGCCCTGGGCA---------GGTTCACCGCCGTGGTGGGGAA---GTGAGAAGACTTG-------------TCTGTGGTTGGCCTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461576 65 + 96509753 GCAGCCCTGGGCA---------GGTTCACCGCCGTCGTGGGGAA---GTGAGAAGACTTG-------------TCTGTGGTTGGCCTGGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733509 65 - 3785965 GCAGCCCTGGGCA---------GGTTCACCGCCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTGGTTGGCCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325345 65 - 90373283 GCAGCCCTGGGCA---------GGTTCACCGCCACGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTGGTTGGCCTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125171 65 - 179258 GCAGCCCTGGGCA---------GGTTCACCGCCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTGGTTGGCCTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601209 65 - 5823884 ACAACCCTGGGCA---------GGTTCACCACCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTAGTTGACCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82067 26 + 372756 ---------------------------------------------------GAAGACTTG-------------CCTGTAGTCGGCCTGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317177 57 + 16356641 --------GGGCA---------GGTTCCCCACCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTAGTTGGCCTGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186079 57 + 1231380 --------GGGCA---------GGTTCCCCACCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTAGTTGCCCTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717662 51 + 11732439 -----------------------GTTCCCCACCATGGTGGGGAA---GTGAGAAGACTTG-------------CCTGTAGTTGGCCTGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56903154 64 + 57149010 ATGACCCTGGGCA---------GGTCCACGACCA-GGTGGGGAG---GTGAGAAGACTTG-------------CCTGTGCCTGGCCTGGG i micMur3.chr18 C 0 I 25 s otoGar3.GL873542 22881176 65 + 22939663 ATGACCCTGGGCA---------GGCTCATGACCAGGGTGGGAAA---GTGAGAAGACTTG-------------CCTGTGCTTGGCCTGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181824853 63 + 182113224 ACAATCCTATGTT---------GGTTCATTGTCAGTGTAGAAAA---TGGAGAA-ATTTG-------------TCTGTATTTGGTCTGG- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 304997 90 - 397369 AAAACCCCAGACATGATGTCTTAGCTCTCCACCCTGGCCGTGAGTCTGCACAGGGCCTTGCTGGCCATGAAGCCTTGCTGGTGGCCTGAG i dasNov3.JH569290 C 0 I 287 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e canFam3.chr24 47636938 243 + 47698779 I e macNem1.NW_012014244v1 16932832 0 - 16982598 C a score=268407.000000 s hg38.chr20_KI270870v1_alt 147805 27 + 183433 GAAGTCGTGCTTGGGAGGCCCTGAGGA s panTro5.chr20 66483080 27 + 66533130 GAAGACGTGCTTGGGAGGCCCTGAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150702 27 + 62195757 GAAGACGTGCTTGGGAGGCCCTGAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 536977 27 - 578057 GAAGATGTGCTTGGGAGGCCCTGAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058690 27 - 110113093 GAAGACGTGCTTGGGAGGCCCTGAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92796114 27 - 92844088 GAAGACGTGCCTGGGAGGCCCTGAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461641 27 + 96509753 GAAGACGTGCTTGGGAGGCCCTGAGGA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733574 27 - 3785965 GAAGACGTGCTTGGGAGGCCCTGAGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325410 27 - 90373283 GAAGACGTGCTTGGGAGGCCCTGAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125236 27 - 179258 GAAGACGTGCTTGGGAGGCCCTGAGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601274 27 - 5823884 GAAGACATGCTTGGGAGGCCCTGAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82093 27 + 372756 GAAGGCGTGCTTGGGAGGCCCCGAGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317234 27 + 16356641 GAAGGTGTGCTTGGGAGGCTCCGAGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186136 27 + 1231380 GAAGGCGTGCTTGGGAGGCCCCGAGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717713 27 + 11732439 GACGGTGTGCTTGGGAGGCCCCGAGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22881241 25 + 22939663 -AAGAC-TGCTTGTGAGGCCTTGGAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181824916 22 + 182113224 --AGGTGTGTCTGGAG---TCTAGGCA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e canFam3.chr24 47636938 243 + 47698779 I e micMur3.chr18 56903218 25 + 57149010 I e dasNov3.JH569290 305087 287 - 397369 I e macNem1.NW_012014244v1 16932832 0 - 16982598 C a score=210935.000000 s hg38.chr20_KI270870v1_alt 147832 24 + 183433 GGCTCTTTGTGGGGATTTCTGGTG s panTro5.chr20 66483107 24 + 66533130 GGCTCTTTGTGGGGATTTCTGGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150729 24 + 62195757 GGCTCTTCGTGGGGATTTCTGGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537004 24 - 578057 GGCTCTTTGTGGGGATTTCTGGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058717 24 - 110113093 GGCTCTTTGTTGGTCTTTCTGGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92796141 24 - 92844088 GGCTCTCTGTTGGTCTTTCTGGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461668 24 + 96509753 GGCTCTCTGTTGGTCTTTCTGGTG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733601 24 - 3785965 GGCTCTCTGTTGGTCTTTCTAGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325437 24 - 90373283 GGCTCTCTGTTGGTCTTTCTGGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125263 24 - 179258 GGCTCTCTGTTGGTCTTTCTAGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601301 23 - 5823884 GGC-CTCTGTTGGTCTTTCTGGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82120 23 + 372756 -GCTCTTTGTTGGTCTTCCTGGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317261 23 + 16356641 -GCTCTTTGTTGGTCTTTCTGGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186163 23 + 1231380 -GCTCTTTGTTGGTCTTTCTGGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717740 19 + 11732439 -GCTCTTT----GTCTTTCTGGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22881266 24 + 22939663 AGGCGTTTGTCAGTTTTTTTAGTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181824938 24 + 182113224 GTCAGCTTGCTGGTCTTTTATGGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47637181 24 + 47698779 GGCACTTTGTTGGTCTTGCTGGTG i canFam3.chr24 I 243 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e micMur3.chr18 56903218 25 + 57149010 I e dasNov3.JH569290 305087 287 - 397369 I e macNem1.NW_012014244v1 16932832 0 - 16982598 C a score=353245.000000 s hg38.chr20_KI270870v1_alt 147856 28 + 183433 AGGGGAAGACCC----AAAGGCAGTCTGACAC s panTro5.chr20 66483131 28 + 66533130 AGGGAAAGACCC----AAAGGCAGTCTGACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150753 28 + 62195757 AGGGGAAGACCC----AAAGGCAGTCTGACAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537028 28 - 578057 AGGGGAAGACCC----AAAGGCAGTCTGACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058741 28 - 110113093 AGGGGAAGACCC----AAAGGCAGGCTGACAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92796165 28 - 92844088 AGGGGAAGACCC----AAAGGCCGTCCGACAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461692 28 + 96509753 AGGGGAAGACCC----AAAGGCCGTCCGACAC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733625 28 - 3785965 AGGGGAAGACCC----AAAGGCCGTCCGACAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325461 28 - 90373283 AGGGGAAGACCC----AAAGGCCGTCCGACAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125287 28 - 179258 AGGGGAAGACCC----AAAGGCCGTCCGACAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601324 28 - 5823884 AGGGGAAGACCC----AAAGGCAGTCTGACAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82143 28 + 372756 AGGAGAAGACCC----AAAGGCAGTTTGACAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317284 28 + 16356641 AGGGAAAGACCC----AAAGGCAATTTGACAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186186 28 + 1231380 AGGGGAAGACCC----AAAGGCAGTGTGACac i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717759 28 + 11732439 AGGGGAAGACCC----AAAGGCAGTTTGACac i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56903243 28 + 57149010 AGGGGAAGACCC----AGAGGCAGTCTGACAC i micMur3.chr18 I 25 I 256 s otoGar3.GL873542 22881290 28 + 22939663 AGGGGAAGATGC----AAGGGCAGTCCAATAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181824962 32 + 182113224 AAGGAAAGACTCAGGAAGGGGCAACCTAATAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47637205 28 + 47698779 CAGGGAAAACCC----AAAGGTGGCCAGACAC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e dasNov3.JH569290 305087 287 - 397369 I e macNem1.NW_012014244v1 16932832 0 - 16982598 C a score=617385.000000 s hg38.chr20_KI270870v1_alt 147884 71 + 183433 TCCACGGGG-GGGTGCAGTGATTTCC----------ATCTTACAGATAGAAGC-AGGAAACATGGTGAAGCTAAGACCACAGC s panTro5.chr20 66483159 71 + 66533130 CCCACGGGG-GGGTGCAGTGATTTCC----------ATCTTACAGATAGAAGC-AGGAAACATGGTGAAGCTAAGACCACAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150781 71 + 62195757 CCCACGGGG-GGGTGCAGTGATTTCC----------ATCTTACAGATAGAAGC-AGGAAACATGGTGAAGCTAAGACCACAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537056 71 - 578057 CCCACGGGG-GGGTGCAGTGATTTCC----------ATCTTACAGATAGAAGC-AGGAAACATGGTGAAGCTAAGACCACAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058769 70 - 110113093 CCCAC-AGG-GTGTGCAGTGATTTCC----------ATCTTACAGTTAGAAGC-AGGAAACATGGTGAAGCTAAGACCACAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92796193 72 - 92844088 CCCACAGGGTGGGTGCAGTGATTCCC----------GTCTTACAGATAGAAGC-AGGAAGCATGGTGAAGCAAAGACCACAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461720 72 + 96509753 CCCACAGGGTGGGTGCAGTGATTCCC----------GTCTTACAGATAGAAGC-AGGAAGCATGGTGAAGCAAAGACCACAGC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733653 72 - 3785965 CCCACAGGGTGGGTGCAGTGATTCCC----------GTCTTACAGATAGAAGC-AGGAAGCATGGTGAAGCAAAGACCACAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325489 52 - 90373283 CCCACAGGGTGGGTGCAGTGATTCCC----------GTCTTACAGATAGAAGC-AGGAAGCAT-------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125315 72 - 179258 CCCACAGGGTGGGTGCAGTGATTCCC----------GTCTTACAGATAGAAGC-AGGAAGCATGGTGAAGCAAAGACCACAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601352 71 - 5823884 CCCACAGCGAGGGTGCAGTGA-TCCC----------ATCTTACAGAGAGAAGC-AGGAAGCATGGTGAAGCGAAGACCACAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82171 72 + 372756 CCCATGAGGTGGGTGCAGTGATTCCC----------ACTTCACAGCTAGCAGC-AGGAAGCATGGTGAAGCTAAGACCACAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317312 72 + 16356641 CCCACGAGGTGGGTGGAGTGATTCCC----------ACTTCACAGATAGCAGC-AGGAAGCATGGTGACACGAGGGCCACAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186214 72 + 1231380 cccatgaggtgggtgcagtgattccc----------acttcacagagagcagc-aggaagcatggtgaagctaagACTGCAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2717787 72 + 11732439 cccatgaggtgggtgcagtgattccc----------acttcacagacagcagc-aggaagcatggtgaagctaagACCACAGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22881318 70 + 22939663 TCCACAAGGTGG--GCTGTTATTCCT----------ATCTTACATGTAACAAC-AGGAAGCATAGAGAAGTGAAGAACACAGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181824994 80 + 182113224 -CCACAAATTGCATGAGATTCTTCCCATTCTACACTATTCTACAAAAAGGAAC-AGGAGGCCTGGC-AAGATCAGAGCACAAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47637233 70 + 47698779 CCCACAAAGTGGATGCAGTG-TTCCT----------AC--TACAGACAAGGACGATAAAATGTGGCAAACTTAAGTACACAGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e micMur3.chr18 56903271 256 + 57149010 I e dasNov3.JH569290 305087 287 - 397369 I e macNem1.NW_012014244v1 16932832 0 - 16982598 C a score=591299.000000 s hg38.chr20_KI270870v1_alt 147955 68 + 183433 AGGTGGAGTCTGAGATTGAGAC-AGGGCGCTGTGAAGTCTGTGCTCCCACCCCATCCCCTCAGGACAGA s panTro5.chr20 66483230 68 + 66533130 AGGTGGAGTCTGAGATTGAGAC-AGGGCGCTGTGAAGTCTGTGCTCCCACCCCATCCCCTCAGGACAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150852 68 + 62195757 AGGTGGAGTCTGAGATTGAGAC-AGGGCGCTGTGAAGTCTGTGCTCCCACCCCATCCCCTCAGGACAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537127 66 - 578057 AGGTGGAGTCTGAGATTGAGAC---GGCGCTGTGAAGTCTGTGCTCCCACCCCATCCCCTCAGGACAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058839 68 - 110113093 AGGTGGAGTCTGAGATTGAGAC-AGGGCGCTGTGAAGTCTGTGCCCCCACCCCATCCCCTCAGGACAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92796265 68 - 92844088 AGGTGGAGTCTGAAGCTGAGAC-AGGGCGCTGTGAAGTCTGTGGTCCCACCCCATCCCCTCAGGACAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461792 68 + 96509753 AGGTGGAGTCTGAAGCTGAGAC-AGGGCGCTGTGAAGTCTGTGGTCCCACCCCATCCCCTCAGGACAGA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733725 68 - 3785965 AGGTGGAGTCTGAAGCTGAGAC-AGGGCGCTGTGAAGTCTGTGGTCCCACCCCATCCCCTCAGGACAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325541 67 - 90373283 -GGTGGAGTCTGAAACTGAGAC-AGGGCGCTGTGAAGTCTGTGCTCCCACCCCATCCCCTCAGGACAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125387 68 - 179258 AGGTGGAGTCTGAAGCTGAGAC-AGGGCGCTGTGAAGTCTGTGGTCCCACCCCATCCCCTCAGGACAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601423 68 - 5823884 AGGTGGAGTCTGAAATGGAGAC-AGGGCGCTGTGAAGTCTGTGCTCCCACCCCATCCCCTCAGGACAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82243 68 + 372756 AGGTGGTGTCCAAGATTGAGAT-AGGGTGCTGTGAAGTCTGTGCTCCCACCCCATCCTCTCAGGACAGA i calJac3.chrUn_GL286459 C 0 T 2088 s saiBol1.JH378156 16317384 67 + 16356641 AGGCGGTGTCTGAGACTGAGAT-A-GTTGCTGTGAAGTCCGTGCTCCCGCCCCATGCCCTCAGGACAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186286 67 + 1231380 AGGTGGTGTCTGAGACCGATAT-A-GGCGCTGTGAAGTGCGTGCTCCCACCCCACCCCCTCAGGACAGA i cebCap1.NW_016107870v1 C 0 I 42 s aotNan1.NW_018500483v1 2717859 68 + 11732439 AGGTGGTGTCTGAGACTGAGAT-AGGGTGCTGTGAAGTCTGTGCTCCCATCCCATCCCCTCAGGACAGA i aotNan1.NW_018500483v1 C 0 I 53 s otoGar3.GL873542 22881388 68 + 22939663 TGGTGGGATCTGAGCTCAAGACTGGGGCACTGTGGGGTTTGTGCTCTCACTCCA-CACTGCAGGATGGA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181825074 67 + 182113224 TAGAGTGGGCAGAGATTGAGCCCAGGGTGCCTTGGAGTCTGTAATTTCTCTCTA--CCCCTAGGAGGGA i mm10.chr2 C 0 I 2 s canFam3.chr24 47637303 3 + 47698779 TAG------------------------------------------------------------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305374 63 - 397369 AGGGGAAGACTCAGAGTTAGCC-CTAACAGGGtgaggtgggtgcttttatccccactttacaga----- i dasNov3.JH569290 I 287 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e micMur3.chr18 56903271 256 + 57149010 I e macNem1.NW_012014244v1 16932832 0 - 16982598 C a score=6683.000000 s hg38.chr20_KI270870v1_alt 148023 3 + 183433 GGG s panTro5.chr20 66483298 3 + 66533130 GGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150920 3 + 62195757 GGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537193 3 - 578057 GGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110058907 3 - 110113093 GGG i nomLeu3.chr13 C 0 T 2365 s rheMac8.chr10 92796333 3 - 92844088 GGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461860 3 + 96509753 GGA i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733793 3 - 3785965 GGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325608 3 - 90373283 GGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125455 3 - 179258 GGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601491 3 - 5823884 GGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80223 3 + 372756 TGA i calJac3.chrUn_GL286459 T 2088 C 0 s otoGar3.GL873542 22881457 2 + 22939663 AG- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181825143 2 + 182113224 AG- i mm10.chr2 I 2 C 0 s dasNov3.JH569290 305437 3 - 397369 gga i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e canFam3.chr24 47637306 0 + 47698779 C e micMur3.chr18 56903271 256 + 57149010 I e saiBol1.JH378156 16317451 0 + 16356641 C e macNem1.NW_012014244v1 16932832 0 - 16982598 C e cebCap1.NW_016107870v1 1186353 42 + 1231380 I e aotNan1.NW_018500483v1 2717927 53 + 11732439 I a score=120068.000000 s hg38.chr20_KI270870v1_alt 148026 37 + 183433 -GCTCAGAAAAC------CAGGAGTGGGGACTTCTCCTGCACGG s panTro5.chr20 66483301 37 + 66533130 -GCTCAGAAAAC------CAGGAGTGGGGACTTCTCCTGCATGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150923 37 + 62195757 -GCTCAGAAAAC------CAGGAGTGGGGACTTCTCCTGCATGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537196 37 - 578057 -GCTCAGAAAAC------CAGGAGTGGGGACTTCTCCTGCACAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056545 37 - 110113093 -GCTCAGAAAAC------CAGGAGGGGGGACCTCTGCTGCACAG i nomLeu3.chr13 T 2365 C 0 s rheMac8.chr10 92796336 36 - 92844088 -GCTCAGAAAAC------CAGGAG-GGGGACCTCTGCTGCACAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461863 36 + 96509753 -GCTCAGAAAAC------CAGGAG-GGGGACCTCTGCTGCACAG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3733796 36 - 3785965 -GCTCAGAAAAC------CAGGAG-GGGGACCTCTGCTGCACAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325611 36 - 90373283 -GCTCAGAAAAC------CAGGAA-GGGGACCTCTGCTGCACAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125458 36 - 179258 -GCTCAGAAAAC------CAGGAG-GGGGACCTCTGCTGCACAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601494 36 - 5823884 -GCTCAGAAAGC------CAGGAG-GGGGACCTCTGCTGCACAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80226 37 + 372756 -GGTCAGAAAGC------CAGGAGAGGGGACCTCTGCTGCACAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317451 5 + 16356641 ---------------------------------------CACGG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22881459 33 + 22939663 -GGCCAGAGAAC------CATGCCACTACAGCCCCCCTGC---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825145 20 + 182113224 -GCAGAGAAAGC------TACATG-------------TAC---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47637306 25 + 47698779 ----CAGTGGGC------AAGGAT-TGGAGCCCCGG-------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305440 41 - 397369 ggaacataaaccatagcaaaggtg-ggtcatctcgcccCAAC-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e micMur3.chr18 56903271 256 + 57149010 I e macNem1.NW_012014244v1 16932832 0 - 16982598 C e cebCap1.NW_016107870v1 1186353 42 + 1231380 I e aotNan1.NW_018500483v1 2717927 53 + 11732439 I a score=111631.000000 s hg38.chr20_KI270870v1_alt 148063 26 + 183433 CGGGTTTCAGTTCCATCTAGAAAGCA s panTro5.chr20 66483338 26 + 66533130 CGGGTTTCAGTTCCATCTAGAAAGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150960 26 + 62195757 CGGGTTTCAGTTCCATCTAGAAAGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537233 26 - 578057 GGGGTTTCAGTTCCATCTAGAAAGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110056582 22 - 110113093 GGGGTTTCAGT----TCTAGAAAGCA i nomLeu3.chr13 C 0 I 2564 s rheMac8.chr10 92796372 25 - 92844088 -GGGTTTCGGTTCCATCTAGAAAGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461899 25 + 96509753 -GGGTTTCGGTTCCATCTGGAAAGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932832 26 - 16982598 CGGGTTTCGGTTCCATCTGGAAAGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733832 25 - 3785965 -GGGTTTCGGTTCCATCTGGAAAGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325647 25 - 90373283 -GGGTTTCGGTTCCATCTAGAAAGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125494 25 - 179258 -GGGTTTCGGTTCCATCTGGAAAGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601530 25 - 5823884 -GGGTTTCAGTTCCATCTAGAAAGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 80263 26 + 372756 CGGGTTTCAGTTCCATCTAGAAAGCA i calJac3.chrUn_GL286459 C 0 I 2052 s saiBol1.JH378156 16317456 1 + 16356641 C------------------------- i saiBol1.JH378156 C 0 I 24 s otoGar3.GL873542 22881492 7 + 22939663 ------TCAGTCA------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825165 11 + 182113224 ---CCTTAAGTGCT------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47637331 13 + 47698779 GCGCTTTCAGTCT------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305481 26 - 397369 CCTGACCTGGTGCCAGCTGGGTCGTA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e micMur3.chr18 56903271 256 + 57149010 I e cebCap1.NW_016107870v1 1186353 42 + 1231380 I e aotNan1.NW_018500483v1 2717927 53 + 11732439 I a score=33264.000000 s hg38.chr20_KI270870v1_alt 148089 22 + 183433 TGGCACAGAG-------GGACGTGCCACA s panTro5.chr20 66483364 22 + 66533130 TGGCACAGAG-------GGACGTGCCACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62150986 22 + 62195757 TGGCACAGAG-------GGACGTGCCACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537259 22 - 578057 TGGCACAGAG-------GGACTTGCCACA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92796397 22 - 92844088 TGGTACAGGG-------AGACGTGCCACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461924 22 + 96509753 TGGTACAGGG-------AGACGTGCCACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932858 22 - 16982598 TGGTACAGGG-------AGACGTGCCACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733857 22 - 3785965 TGGTACAGGG-------AGACGTGCCACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325672 22 - 90373283 TGGTACAGGG-------AGACGTGCCACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125519 22 - 179258 TGGTACAGGG-------AGACGTGCCACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601555 22 - 5823884 TGGTACAGGG-------AGACGTGCCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82341 12 + 372756 TGGCACAG--------------TCCT--- i calJac3.chrUn_GL286459 I 2052 C 0 s saiBol1.JH378156 16317481 12 + 16356641 TGGCACAG--------------TCCC--- i saiBol1.JH378156 I 24 C 0 s otoGar3.GL873542 22881499 8 + 22939663 CCGCACCG--------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825176 7 + 182113224 TGGCATA---------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47637344 5 + 47698779 GGGTG------------------------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305507 25 - 397369 CCACACAGCACTCACCTGGTCATCA---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e micMur3.chr18 56903271 256 + 57149010 I e cebCap1.NW_016107870v1 1186353 42 + 1231380 I e aotNan1.NW_018500483v1 2717927 53 + 11732439 I e nomLeu3.chr13 110056604 2564 - 110113093 I a score=287917.000000 s hg38.chr20_KI270870v1_alt 148111 35 + 183433 CGAGCCCCCTTCCT--GGCTTCCCT-GG---AGTCAGCCCA s panTro5.chr20 66483386 35 + 66533130 TGAGCCCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151008 35 + 62195757 TGAGCCCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537281 34 - 578057 CGAG-CCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92796419 34 - 92844088 CGAG-CCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461946 34 + 96509753 CGAG-CCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932880 34 - 16982598 CGAG-CCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733879 34 - 3785965 CGAG-CCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325694 34 - 90373283 CGAG-CCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125541 34 - 179258 CGAG-CCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601577 35 - 5823884 TGAGCCCCCTTCCT--GGCTTCCCT-GG---AGTCAGGCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82353 35 + 372756 TGCATCCCCTTCCT--GGCTTCCCT-GG---AGCCAGGCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317493 35 + 16356641 CGCATCCCCTTCCT--GGCCTCCCT-GG---AGCCAGGCCG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186395 35 + 1231380 TGCATCCCCTTCCT--GGCCTCCCT-GG---AGCCAGGCCG i cebCap1.NW_016107870v1 I 42 C 0 s aotNan1.NW_018500483v1 2717980 35 + 11732439 tgCATCCCCTTCCT--GGCTTCCCT-GG---AGCCAGGCCA i aotNan1.NW_018500483v1 I 53 C 0 s otoGar3.GL873542 22881507 26 + 22939663 --------TTCCCT--GGCTTCCCTCTG---GGTCAGGC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825183 28 + 182113224 -----CCAGCTCCT--ACTTCCTTT-GG---GCAGAGGC-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47637349 26 + 47698779 -------CCTTCCT--GACCCGGCA-GGGACAGTCA----- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305532 33 - 397369 ----CGCCCCTCCTTCTGCTTCCCT-GG---AGGGGTGCGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1893782 328 - 2029793 I e micMur3.chr18 56903271 256 + 57149010 I e nomLeu3.chr13 110056604 2564 - 110113093 I a score=299162.000000 s hg38.chr20_KI270870v1_alt 148146 25 + 183433 TGTCTCCAG--AGGGCCCTTGCCTTTC s panTro5.chr20 66483421 25 + 66533130 TGTCTCCAG--AGGGCCCTTGCCTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151043 25 + 62195757 TGTCTCCAG--AGGGCCCTTGCCTTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537315 25 - 578057 TGTCTCCAG--AGGGCCCTTGCCTTTC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92796453 25 - 92844088 TGTCTCCAG--AGGGCCCTTGCCTTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96461980 25 + 96509753 TGTCTCCAG--AGGGCCCTTGCCTTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932914 25 - 16982598 TGTCTCCAG--AGGGCCCTTGCCTTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733913 25 - 3785965 TGTCTCCAG--AGGGCCCTTGCCTTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325728 25 - 90373283 TGTCTCCAG--AGGGCCCTTGTCTTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125575 25 - 179258 TGTCTCCAG--AGGGCCCTTGCCTTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601612 25 - 5823884 TGTCTCCAG--AGGGCTCTTGCCTTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82388 24 + 372756 TGT-TTCAG--AGGGCCCTTGCCTTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317528 25 + 16356641 TGTCTCCAG--AGGGCCCTTGCCTTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186430 25 + 1231380 TGTCTTCAG--AGGGCCCTTACCTTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718015 25 + 11732439 TGTCTTCAG--AGGGCCCTTGCCTTTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1894110 25 - 2029793 TGTCTCCAG--AGGGCCCTTGCCTTTC i proCoq1.NW_012150197v1 I 328 I 24 s otoGar3.GL873542 22881533 25 + 22939663 TGTCTCCAG--AAGGCCCTTGCCTTTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825211 22 + 182113224 --TCTCCAATCAGGGACCAGAGCT--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47637375 25 + 47698779 TGGCCCCAC--ACAGCCCCTGGCCCTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305565 17 - 397369 TGCTGCCGG--AAGA----TGTC---- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56903271 256 + 57149010 I e nomLeu3.chr13 110056604 2564 - 110113093 I a score=64977.000000 s hg38.chr20_KI270870v1_alt 148171 6 + 183433 TCTCCT s panTro5.chr20 66483446 6 + 66533130 TCTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151068 6 + 62195757 TCTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537340 6 - 578057 TCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92796478 6 - 92844088 TCTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462005 6 + 96509753 TCTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932939 6 - 16982598 TCTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733938 6 - 3785965 TCTCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325753 6 - 90373283 TCTCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125600 6 - 179258 TCTCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601637 6 - 5823884 TCTCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82412 6 + 372756 TCTCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317553 6 + 16356641 TCTCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186455 6 + 1231380 TCTCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718040 6 + 11732439 TCTCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22881558 6 + 22939663 TCTTCT i otoGar3.GL873542 C 0 I 18 s canFam3.chr24 47637400 5 + 47698779 TCACT- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305582 6 - 397369 TTTCAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1894135 24 - 2029793 I e mm10.chr2 181825233 0 + 182113224 C e micMur3.chr18 56903271 256 + 57149010 I e nomLeu3.chr13 110056604 2564 - 110113093 I a score=231912.000000 s hg38.chr20_KI270870v1_alt 148177 32 + 183433 CTGCC------------AGCCCCTCACCTGT-GGCAGAACCCCCT----- s panTro5.chr20 66483452 32 + 66533130 CTGCC------------AGCCCCTCACCTGT-GGCAGAACCCCCT----- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151074 32 + 62195757 CTGCC------------AGCCCCTCACCTGT-GGCAGAACCCCCT----- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537346 32 - 578057 CTGCC------------AGCCCCTCACCTGT-GGCAGAACCCCCT----- i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92796484 31 - 92844088 CTGGC------------AGCCCCTCACCTGT-GGCAGGA-CACTT----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462011 31 + 96509753 CTGGC------------AGCCCCTCACCTGT-GGCAGGA-CACTT----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932945 31 - 16982598 CTGGC------------AGCCCCTCACCTGT-GGCAGGA-CACTT----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733944 31 - 3785965 CTGGC------------AGCCCCTCACCTGT-GGCAGGA-CACTT----- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325759 31 - 90373283 CTGGC------------AGCCCCTCACCTGT-GGCAGGA-CACTT----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125606 31 - 179258 CTGGC------------AGCCCCTCACCTGT-GGCAGGA-CACTT----- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601643 31 - 5823884 CTGGC------------AGCCCCTCACCTGT-GGCAGGA-CACTT----- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82418 32 + 372756 CTGCC------------AGTCCCTCACCTGT-GGCAGGATCCCCT----- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317559 32 + 16356641 CTGCC------------AGTCCCTCACCTGT-GGCAGGATGCCCT----- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186461 32 + 1231380 CTGCC------------AGTCCCTCACCTGT-GGCAGGATCCCCT----- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718046 32 + 11732439 CTGCC------------AGTCCCTCACCTGT-GGCAGGATCCCCT----- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1894159 30 - 2029793 CTGCC------------AGCCCCTCACCGT--GGCAGGACCCCC------ i proCoq1.NW_012150197v1 I 24 C 0 s otoGar3.GL873542 22881582 32 + 22939663 TTGCC------------AGCTCCTTACCTGCAGGCAGGATCCCC------ i otoGar3.GL873542 I 18 C 0 s mm10.chr2 181825233 31 + 182113224 CTACC------------ATCTCTTTCCTTG--GATGGGATACCCC----- i mm10.chr2 C 0 C 0 s canFam3.chr24 47637405 12 + 47698779 ---GC------------ATACCCTCCT----------------------- i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 305588 47 - 397369 CTGGCCTAGAGAGATGTGACTTTGTAGCT-T-GGAAGCA-CACCCACTCT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56903271 256 + 57149010 I e nomLeu3.chr13 110056604 2564 - 110113093 I a score=441888.000000 s hg38.chr20_KI270870v1_alt 148209 36 + 183433 ACAGGAAGGCAGGGTCCCTGCCTCTTCCCCCACCCC s panTro5.chr20 66483484 36 + 66533130 ACAGGAAGGCAGGGTCCCTGCCTCTTCCCCCACCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151106 36 + 62195757 ACAGGAAGGCAGGGTCCCTGCCTCTTCCCCCACCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537378 36 - 578057 ACAGGAAGGCAGGGTCCCTGCCTCTTCCCCCACCCC i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92796515 36 - 92844088 ACAGGAAGGCAGGGTCCCTGCCCCTTCCCCCACCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462042 36 + 96509753 ACAGGAAGGCAGGGTCCCTGCCCCTTCCCCCACCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16932976 36 - 16982598 ACAGGAAGGCAGGGTCCCTGCCCCTTCCCCCACCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3733975 36 - 3785965 ACAGGAAGGCAGGGTCCCTGCCCCTTCCCCCACCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325790 35 - 90373283 ACAGGAAGGCAGGGTCCCTG-CCCTTCCCCCACCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125637 36 - 179258 ACAGGAAGGCAGGGTCCCTGCCCCTTCCCCCACCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601674 36 - 5823884 ACAGGAAGGCAGGGTCCCTGCCCCTTCCCCCACCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82450 36 + 372756 ACAGGAAGGCAGGGGCCCTGCCTCTTCCCCCACCCG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317591 36 + 16356641 GCAGGAAGGCAGAGGCCCTGCCTCTTCCCCCACCCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186493 36 + 1231380 ACAGGAAGGCAGAGGCCTTGCCTCTTCCCCCACCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718078 36 + 11732439 ACAGGAAGGCAGGGGCCCTGCCTCTTCCCCCACCCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56903527 36 + 57149010 ACAGGAAGGCAGGGTCCCTGCCTCTTCCCCCATCCC i micMur3.chr18 I 256 C 0 s proCoq1.NW_012150197v1 1894189 36 - 2029793 ACAGGAAGGCAGGGTCCCTGCCTCCTCCCCGACCCC i proCoq1.NW_012150197v1 C 0 I 47 s otoGar3.GL873542 22881614 31 + 22939663 ACAGGAAGGCAGTGTCCCTGCCTCTCCTCCA----- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825264 34 + 182113224 ATGGGGGAGCAGAACCAAGTCTCCTTCCCACTGA-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47637420 26 + 47698779 TCCAGGGGCCAGGGTCCCTGCCTGAC---------- i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 305635 13 - 397369 CAAGGAAGGCATA----------------------- i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 110056604 2564 - 110113093 I a score=207017.000000 s hg38.chr20_KI270870v1_alt 148245 20 + 183433 AGGGTTCTGCATTCTCCCAG s panTro5.chr20 66483520 20 + 66533130 AGGGTTCTGCATTCTCCCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151142 20 + 62195757 AGGGTTCTGCATTCTCCCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537414 20 - 578057 AGGGTTCTGCATTCTCCCAG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92796551 20 - 92844088 AGGGTTCTGCATTCTCCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462078 20 + 96509753 AGGGTTCTGCATTCTCCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933012 20 - 16982598 AGGGTTCTGCATTCTCCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734011 20 - 3785965 AGGGTTCTGTATTCTCCCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325825 20 - 90373283 AGGGTTCTGCATTCTCCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125673 20 - 179258 AGGGTTCTGTATTCTCCCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601710 20 - 5823884 AGGGTTCTGCATTCTCCCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82486 20 + 372756 AGGGTTTTGCATTCTCCTAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317627 20 + 16356641 AGGGTTCTGCATTCCCCCGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186529 20 + 1231380 AGGGTTCTGCATTCTCCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718114 20 + 11732439 AGGCTTCTGCATTCTCCCGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56903563 20 + 57149010 AGGGCCCTGCCCTCTCCTAG i micMur3.chr18 C 0 I 25 s mm10.chr2 181825298 20 + 182113224 TGAGCTTTGTCTTTTCCTAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47637446 20 + 47698779 AGAAGCCACAGAAATCCCAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305648 13 - 397369 AGCGTCCTGCCCT------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1894225 47 - 2029793 I e nomLeu3.chr13 110056604 2564 - 110113093 I e otoGar3.GL873542 22881645 0 + 22939663 C a score=240452.000000 s hg38.chr20_KI270870v1_alt 148265 28 + 183433 AGGGTTGTGAGAGGCAGCCCAGAGAGGA s panTro5.chr20 66483540 28 + 66533130 AGGGTTGTGAGAGGCAGCCCAGAGAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151162 28 + 62195757 AGGGTTGTGAGAGGCAGCCCAGAGAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537434 28 - 578057 AGGGTTGTGAGAGGCAGCCCAGAGAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92796571 27 - 92844088 AGGGTTGTGAGAGGCAGCCCAG-GAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462098 27 + 96509753 AGGGTTGTGAGAGGCAGCCCAG-GAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933032 27 - 16982598 AGGGTTGTGAGAGGCAGCCCAG-GAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734031 27 - 3785965 AGGGTTGTGAGAGGCCGCCCAG-GAGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325845 28 - 90373283 AGGGTTGTGAGAGGCAGCCCAGAGAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125693 27 - 179258 AGGGTTGTGAGAGGCAGCCCAG-GAGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601730 28 - 5823884 AGGGTTGTGAGAGGCAGCCCAGAGAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82506 28 + 372756 AAGGTTGTGAGAGGCAGCCCAGAGAGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317647 28 + 16356641 AGGGTTGTGAGAGGCAGCCCAGAGAGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186549 28 + 1231380 AGGGTTGTGAGAGGCAGCCCAGAGAGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718134 28 + 11732439 AGGGTTGTGAGAGGCAGCCCAGAGAAAG i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181825318 23 + 182113224 AACACAGTGAGGTATGGCCAGTA----- i mm10.chr2 C 0 I 2 s canFam3.chr24 47637466 28 + 47698779 AGAAACATGAGATGTGGCACAGTTAGCA i canFam3.chr24 C 0 I 10 s dasNov3.JH569290 305661 15 - 397369 -------------GGGGCACAGAGAAGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1894225 47 - 2029793 I e micMur3.chr18 56903583 25 + 57149010 I e nomLeu3.chr13 110056604 2564 - 110113093 I e otoGar3.GL873542 22881645 0 + 22939663 C a score=2307295.000000 s hg38.chr20_KI270870v1_alt 148293 145 + 183433 CCCCCAGGAGGAT---------GGGGGCCAAGGGC--AGGCGGCACTTCGAATCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT s panTro5.chr20 66483568 145 + 66533130 CCCCCAGGAGGAT---------GGGGGCCAAGGGC--AGGCGGCACTTCAAATCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151190 145 + 62195757 CCCCCAGGAGGAT---------GGGGGCCAAGGGC--AGGCGGCACTTTGAATCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537462 145 - 578057 CCCCCAGGAGGAT---------GGGGGCCAAGGGC--AGGCGGCACTTCGAATCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92796598 145 - 92844088 CTCCCAGGAGGAT---------GGGGGCCAAGGGC--AGGCAGCACTTCAGACCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462125 145 + 96509753 CTCCCAGGAGGAT---------GGGGGCCAAGGGC--AGGCAGCACTTCAGACCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933059 145 - 16982598 CTCCCAGGAGGAT---------GGGGGCCAAGGGC--AGGCAGCACCTCAGACCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734058 145 - 3785965 CTCCCAGGAGGAT---------GGGGGCCGAGGGC--AGGCAGCACTTCAGACCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90325873 145 - 90373283 CTCCCAGGAGGAT---------GGGGGCCAAGGGC--AGACAGCACTTCAGACCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125720 145 - 179258 CTCCCAGGAGGAT---------GGGGGCCAAGGGC--AGGCAGCACTTCAGACCTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601758 145 - 5823884 CTCCCAGGAGGAT---------GGGGGCCAAGGGC--AGGCAGCACTTCAAACGTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82534 145 + 372756 CCCCCAGGAGGAT---------GGGGGCCAAGAAC--GGGTGGCACCTCAAATCTGTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATTGAGGAGGAGAACAAACTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317675 146 + 16356641 CCTGCAGGAGGATG--------GGGGGCCAAGGAT--GGGTGGCACTTCGAATCTGTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATCGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186577 145 + 1231380 CCCCCAAGAGGAT---------GGGGGCCAAGGAC--GGGTGGCACTTCGAATCTGTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATTGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718162 144 + 11732439 CCC-CGGGAGGAG---------GGGGGCCAAGGAT--GGGTGGCACTTCAAGTCTGTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAACATTGAGGAGGAGAACAAGCTCATTGAGGAGCAGAACGAAGCCTTGTTTCTGGAGCTGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56903608 145 + 57149010 CTCCCAGGAAGATG--------GGGGGCCACGGGC--AGGAGACA-CTCAAGCCTCCCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAGCATCGAGGAGGAGAACAAGCTCATCGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i micMur3.chr18 I 25 C 0 s proCoq1.NW_012150197v1 1894272 143 - 2029793 CTCCCAGGAGGAT----------GGGGCCACGGGC--AGGGGACA-CTCAAGTCTGTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAAGAGCATCGAGGAGGAGAACAAGCTCATCGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i proCoq1.NW_012150197v1 I 47 C 0 s otoGar3.GL873542 22881645 115 + 22939663 ---------------------------------------GATAC--CTCGAGTTTCTCTCTGGCACAGATCTCCTCCATGGAGAAGAACCTGAGGAGCATCGAAGAGGAGAACAAGCTCATTGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825343 142 + 182113224 TTCATACTAAGCC----------AGGGCCAAGGGA--AGGCAGCATTTTCTA--TGTCTCTGCCACAGATCTCGTCCATGGAGAAGAACCTGAAGAACATCGAGGAGGAGAACAAGCTCATTGAGGAGCAGAATGAGGCCCTGTTTCTGGAATTGT i mm10.chr2 I 2 C 0 s canFam3.chr24 47637504 156 + 47698779 GTCCCAGGAGGATATGAGGGATGTGGTCCATGGGAGGAGGAGGCATTTCCCATCTCGGTCTGGTGCAGATCTCCTCCATGGAGAAAAGCCTGAAGAATATCGAGGAGGAGAACAAGCTCATCGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i canFam3.chr24 I 10 C 0 s dasNov3.JH569290 305676 143 - 397369 -TACCTGGGCCTG---------GAGGGAAAAGGGC--AAGTGGCACCCCCC-TCTCTCTCTGGAGCAGATATCCTCCATGGAGAAGAACCTGAGGAATATTGAGGAGGAGAACAAGCTCATCGAGGAGCAGAATGAAGCCCTGTTTCTGGAGCTGT i dasNov3.JH569290 C 0 C 0 e nomLeu3.chr13 110056604 2564 - 110113093 I a score=1355839.000000 s hg38.chr20_KI270870v1_alt 148438 70 + 183433 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCGCACATGGTAGGCAGCACGCG s panTro5.chr20 66483713 70 + 66533130 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCGCACATGGTAGGCAGCACGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151335 70 + 62195757 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCGCACATGGTAGGCAGCACGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537607 70 - 578057 CCGGCCTGAGCCAGGCTCTCATCCAAAGTCTCGCCAATATCCGCCTTCCGCACATGGTAGGCAGCACGCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059168 70 - 110113093 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAACATCCGCCTTCCGCACATGGTAGGCAGCACGCG i nomLeu3.chr13 I 2564 C 0 s rheMac8.chr10 92796743 70 - 92844088 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCACACATGGTAGGCAGCACGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462270 70 + 96509753 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCACACATGGTAGGCAGCACGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933204 70 - 16982598 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCACACATGGTAGGCAGCACGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734203 70 - 3785965 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCACACATGGTAGGCAGCACGCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326018 70 - 90373283 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCACACATGGTAGGCAGCACGCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125865 70 - 179258 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTTGCCAACATCCGCCTTCCACACATGGTAGGCAGCACGCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601903 70 - 5823884 CTGGCCTGAGTCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCACACATGGTAGGCAGCACGCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82679 70 + 372756 CCGGCCTGAGCCAGGCTCTCATCCAAAGTCTCGCCAATATCCGCCTTCCACATATGGTAGGCAGCACACG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317821 70 + 16356641 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCGCATATGGTAGGCAGCACACG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186722 70 + 1231380 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCGCACATGGTAGGCAGCACACG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718306 62 + 11732439 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCGCATATGGTAGGC-------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56903753 70 + 57149010 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCACACATGGTAGGCAGCATGCG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1894415 70 - 2029793 CTGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAACATCCGCCTTCCACACATGGTAGGCAGCACGCG i proCoq1.NW_012150197v1 C 0 I 351 s otoGar3.GL873542 22881760 70 + 22939663 CCGGCCTGAGCCAGGCCCTCATCCAAAGTCTCGCCAATATCCGCCTTCCGCACATGGTAGGAAGTGCATG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825485 69 + 182113224 CCGGGCTTAGCCAAGCCCTCATCCAAAGTCTTGCCAATATTCGCCTTCCACACATGGTAGGCAGCAAAT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47637660 70 + 47698779 CGGGCCTCAGCCAAGCCCTCATCCAAAGTCTCGCCAACATCCGCCTTCCGCACATGGTAAGCAGTATGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305819 61 - 397369 CTGGCCTGAGCCAGGCCCTCATCCGAAGTCTCGCCAACATCCGCCTGCCTCACATGGTAGG--------- i dasNov3.JH569290 C 0 C 0 a score=70447.000000 s hg38.chr20_KI270870v1_alt 148508 6 + 183433 GGCCTG s panTro5.chr20 66483783 6 + 66533130 GGCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151405 6 + 62195757 GGCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537677 6 - 578057 GGCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059238 6 - 110113093 GGCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92796813 6 - 92844088 GACCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462340 6 + 96509753 GACCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933274 6 - 16982598 GACCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734273 6 - 3785965 GACCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326088 6 - 90373283 GACCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125935 6 - 179258 GACCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601973 6 - 5823884 GACCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82749 6 + 372756 GCCCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317891 6 + 16356641 GCCCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186792 6 + 1231380 GCCCTG i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56903823 6 + 57149010 GCCCTG i micMur3.chr18 C 0 I 302 s otoGar3.GL873542 22881830 6 + 22939663 GCCCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825554 6 + 182113224 CACCTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47637730 6 + 47698779 GCCCTG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1894485 351 - 2029793 I e dasNov3.JH569290 305880 0 - 397369 C e aotNan1.NW_018500483v1 2718368 0 + 11732439 C a score=2166854.000000 s hg38.chr20_KI270870v1_alt 148514 255 + 183433 CCGGCACCACAGCTA-CCCCCCAGGGTCTCTTCGGAAAGCAGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGGGCCCTGTGCCCTTGTGGAGATTCTCTCCACCCCGAATG------GCCCG---GGCT-----GTTGGCTGTGGTGGGTTTAGCCACCATAATGAGTAGCTGCCATAAAGAGTAGCTAATGAATCCAAAGCAAAATGGTGAT--TCCATGAGCAGAGAGGC-TACTGCTGGGA----TGGCTGCAGAG s panTro5.chr20 66483789 255 + 66533130 CCGGCACCACAGCTA-CCCCCCAGGGTCTCTTCGGAAAGCAGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGGGCCCTGTGCCCTTGTGGAGATTCTCTCCACCCCGAATG------GCCCG---GGCT-----GTTGGCTGTGGTGGGTTTAGCCACCATAATGAGTAGCTGCCATAAAGAGTAGCTAATGAATCCAAAGCAAAATGGTGAT--TCCATGAGCAGAGAGGC-TACTGCTGGGA----TGGCTGCAGAG i panTro5.chr20 C 0 I 147 s panPan2.chr20 62151411 255 + 62195757 CCGGCACCACAGCTA-CCCCCCAGGGTCTCTTCGGAAAGCAGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGGGCCCTGTGCCCTTGTGGAGATTCTCTCCACCCCGAATG------GCCCG---GGCT-----GTTGGCTGTGGTGGGTTTAGCCACCATAATGAGTAGCTGCCATAAAGAGTAGCTAATGAATCCAAAGCAAAATGGTGAT--TCCATGAGCAGAGAGGC-TACTGCTGGGA----TGGCTGCAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537683 255 - 578057 CCGGCACCACAGCTG-CCCCCCAGGGTCTCTTCGGAAAGCAGGAGGG-CA--------GGGCAGCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGAGCCCTGTGCCCTTGTGGAGATTCTCTCCACCCCGAATG------GCCCG---GGCT-----GTTGGCTGTGGTGGGTTTAGCCACCATAATGAGTAGCTGCCATAAAGAGTAGCTAATGAATCCAAAGCAAAATGGTGAT--TCCATGAGCAGAGAGGC-TACTGCTGGGA----TGGCTGCAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059244 239 - 110113093 CCGGCACCACAGCTG---CCCCGGGGTCTCTTCGCAAAGCGGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGGGCCCTGTGCCCTTGTGGAGATTCTCTCCACCCCGAATG------GCCCGGCAGGCT-----GTTGGCTACGGTGGCTTTAGCCA----------------CCACAAGGAGTAGCTCATGAATCCAAAGCAAAA-GGTGAT--TCCATCAGCAGAGAGGC-TACTGCGGGGA----TGGCTGCAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92796819 239 - 92844088 CCGGCACCACAGCTG-CCCCCCAGGGTCTCTCCGGAAAGCAGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGGGTCCTGTGCCCTGGTGGAGATTCTCTCTACCCCGAATG------GCCTG---GGCA--TTGGTTGGCTATGGTGGCTTTAGCCCTCCT-------------------GAGTAGCTAATGAATCCGAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TACTGCTGGGA----AGGCTGCAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462346 239 + 96509753 CCGGCACCACAGCTG-CCCCCCAGGGTCTCTCCGGAAAGCAGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGGGTCCTGTGCCCTGGTGGAGATTCTCTCTACCCCGAATG------GCCTG---GGCA--TTGGTTGGCTATGGTGGCTTTAGCCCTCCT-------------------GAGTAGCTAATGAATCCGAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TACTGCTGGGA----AGGCTGCAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933280 239 - 16982598 CCGGCACCACAGCTG-CCCCCCAGGGTCTCTCCGGAAAGCAGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGGGTCCTGTGCCCTGGTGGAGATTCTCTCTACCCCGAATG------GCCTG---GGCA--TTGGTTGGCTATGGTGGCTTTAGCCCTCCT-------------------GAGTAGCTAATGAATCCGAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TACTGCTGGGA----TGGCTGCAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734279 239 - 3785965 CCGGCACCACAGCTG-CCCCCCAGGGTCTCTCCGGAAAGCAGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCTTAGGGGTCCTGTGCCCTGATGGAGATTCTCTCTACCCCGAATG------GCCTG---GGCA--TTGGTTGGCTATGGTGGCTTTAGCCCTCCT-------------------GAGTAGCTAATGAATCCGAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TACTGCTGGGA----TGGCTGCAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326094 239 - 90373283 CCGGCACCACAGCTG-CCCCCCAGGGTCTCTCCGGAAAGCAGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGGGTCCTGTGCCCTGGTGGAGATTCTCTCTACCCCGAATG------GCCTG---GGCA--TTGGTTGGCTATGGTGGCTTTAGCCCTCCT-------------------GAGTAGCTAAGGAACCCGAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TACTGCTGGGA----TGGCTGCAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 125941 239 - 179258 CCGGCACCACAGCTG-CCCCCCAGGGTCCCTCCGGAAAGCAGGAGGG-CA--------GGGCATCTCCCACCCCCTCTGCCTCTGGGTCCTGCCCTAGGGGTCCTGTGCCCTGGTGGAGATTCTCTCTACCCCGAATG------GCCTG---GGTA--TTGGTTGGCTATGGTGGCTTTAGCCCTCCT-------------------GAGTAGCTAATGAATCCGAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TACTGCTGGGA----TGGCTGCAGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5601979 240 - 5823884 CCAGCACCACAGCTG-CCCCCCAGGGTCTCTTCGGAAAGCAGGAGAG-CA--------GGGCATCTCCCACCCCCTCTGCCACTGGGTCCTGCCCTAGGGGTCCTGTGCCCTGGTGGAGATTCTCTCTACCCCGAATG------GCCCA---GGCA-GGCTGTTGGCTATGATGGCTTTAGCCCTCCT-------------------GAGTAGCTAATGAATCCGAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TACTGCTGGGA----TGGCTACAGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82755 238 + 372756 TGGGCACCATGGCTA-CCCCCCAGGGTTTCTTCAGAAAGCAGTAGGG-CA---------GGTCTCTCCCA-CCCCTCTGCCTCTGGGTCCCACCTTAGGGGTCCTGTGCCCTTGTGGAGATTCTCTCGACCCCGAATG------GCCTG---GGCA-GGATGTTGGCTGTGGTGGCTTTAGCTCTCCT-------------------GAGTAGCTGATGAATCCAAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TACTTCTGGGT----TGGCTGCAGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16317897 221 + 16356641 CGGCCACCTCGGCTG-CCCCCCAGGGTCTCTTCAGAAAGCAATAGGG-CA--------GGGTGTCTCCCA-CCCCTCTGCCTCTGGGTCCTGCCCTA------------------GGAGATTCTCTCCACCCCGAATG------GCCCG---GGCA-GGATGTTGGCTGTGGTGGCTTTAGCCCTCCT-------------------GAGTAGCTGATGAATCCAAAGCAAAACGGCGAT--TCCATCAGCAGAGAGGC-TCCTGCTGGGT----TGGCTGCAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1186798 238 + 1231380 TGGGCACCTCGGCTG-CCCCCCAGGGTCTCTTCCGAAAGCAGTAGGG-CA--------GGGCATCTCCCA-CCCCTCTGCCTCTGGGTCCTGCCCTAGGGGTCCTGTGCCCTTGTGGATATTCTGTCCACCCCGAATG------GCCCG---GGCA-GGATGTTGGCTGTGGTGGCTTTAGCCCTCCT-------------------GAGTAGC-GATGAATCCAAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TACTGCATGGT----TTGCTGCAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718368 229 + 11732439 --GGCACCTCGGCTG-CCCCCTGGGGTCTCTTCAGGAAGCAGTAGGG-CA--------GGGCATCTCCCA-CCCCTCTGCCTCCGGGTCCCGCCCTAGGGGTCCTGT--------GCAGATTCTGTCCACCCCGAATG------GCCCG---GGCG-GGATGTTGGCCATGGTGGCTTCAGCCCTCCT-------------------GGGTAGCTGATGAACCCAAAGCAAAATGGTGAT--TCCATCAGCAGAGAGGC-TGCTGCTGGGT----TGGCTGCAGAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22881836 207 + 22939663 CAAGTGCCACAGCTG------------------AGCTGGCGGGAGGGTTA--------GGGTATCTCTCA-CCTGCCTGCCTCTGGGCTCTGTGGGGAGTGTCCTCACCATTTGTGGAGATTCTCTGTGCTCCGAATG------GCACA--------------------TGGCAGCTCTAGCCCTCCC-------------------AAACCATTTACAAATCCCAAACAGAATAATGGT--TACAACAGCAGAGAGCC-TATTGCTAGAA----TTGCTGCAGAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825560 231 + 182113224 TGGGTATTACTGCTGAACTAGCAGCTGCTCTAGGGATGGTTCCAGGG-TTGGAACAGTGGGTGTAACCCA-CTGCTTTGTTAATGAGTCCTTAGGGAAGGATCCTGTG-------AGAATGATTCAGTGTTCTCAGTG------GTCTG-TGGGCCTAGCTGTTGGCTATT---GATCTGGTCCT----------------------GAGTAGCTCATGAATTGTGGCTAATAGGGT--T--TCAGTGAGT------GT-TGTTGCTATGACTTTTAGTTTTA--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47637736 143 + 47698779 -------------------------------CGGGCAAGCCCCAGAG-CT--------GG---TGGCTGA-CCCCTAGGACTCTGGG---------GAGGGTGCTATGCC--------------------------TG------GC--A---GGCT-----GTTGGCCGTGGTGGTTCTGGCTCCCCT-------------------GAACAGCTTAGGAGTCCACAGCACGGCACTCAT----------------GGT-TTTT-----------TGGCC-CAGCG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 305880 171 - 397369 ------------------ATCCTGGGGCCCTT-GGAGGGCAGGGTGG-CG--------GGT----------GCCCTTGGCCTCCAGGTCCAGC-------------TGCTCTG--GGGGATTCTCTCCCCTACTGGTGCACTCCGTCCG---GGCA-----GTCAGCCCGAG----------CCCAGT-------------------GAAGAGCC--TGAATTAAAACCCGGA--GTCATGGCCCAGCAGCAGACAGACACACAG--------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1894485 351 - 2029793 I e micMur3.chr18 56903829 302 + 57149010 I a score=193255.000000 s hg38.chr20_KI270870v1_alt 148769 31 + 183433 AGGAACGC---------------------------------------CCAGTGCTGCCTCTGGTTGGTGT s panTro5.chr20 66484191 31 + 66533130 AGGAACGC---------------------------------------CCAGTGCTGCCTCTGGTTGGTGT i panTro5.chr20 I 147 C 0 s panPan2.chr20 62151666 31 + 62195757 AGGAACGC---------------------------------------CCAGTGCTGCCTCTGGTTGGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537938 31 - 578057 AGGAACGC---------------------------------------CCAGTGCTGCCTCTGGTTGGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059483 61 - 110113093 AGAAACACTCATGTTGTTTCAGC---------ACGAGGGCAGTGCAGCCAGTGCTGCCTCTGGTTGGTAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797058 54 - 92844088 AGAAACAC--------TCAAAGC--------AACCAGGGCAGGGCAGCCAGTGCTGCCCCGAGTTGGTAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462585 54 + 96509753 AGAAACAC--------TCAAAGC--------AACCAGGGCAGGGCAGCCAGTGCTGCCCCGAGTTGGTAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933519 54 - 16982598 AGAAACAC--------TCAAAGC--------AACCAGGGCAGGGCAGCCAGTGCTGCCCCGAGTTGGTAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734518 54 - 3785965 AGAAACAC--------TCAAAGC--------AACCAGGGCAGGGCAGCCAGTGCTGCCCCGAGTTGGTAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326333 54 - 90373283 AGAAACAC--------TCAAAGC--------AACCAGGGCAGGGCAGCCAGTGCTGCCCCGAGTTGGTAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126180 54 - 179258 AGAAACAC--------TCAAAGC--------CACCAGGGCAGGGCAGCCGGTGCTGCCCCGAGTTGGGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602219 54 - 5823884 AGAAACAC--------TCAAAGC--------AACCAGGGCAGGGCAGCCAGTGCTGCCCCTAGTTGGTAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 82993 62 + 372756 GGGAGTAG--------GCGTGGTTGTTTCAGCATGAGGACAGTGCAGCCAATGCTGTCTCTAGCTGGTAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318118 62 + 16356641 AGCCACAC--------TCGTGGTTGTTTCAGCATGAGGACAGTGCAGCCAGCGCTGTCTCTAGCTGGTAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187036 62 + 1231380 GGGAGCAC--------TCGAGGTTGTTTCTGCATGAGGACAGTGCAGCCAGTGCTGTCTCTAGCTGCTAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718597 61 + 11732439 GGG-GCAC--------TCCTGGTCGTTTCAGCACGAGGACGGTGCGGCCAGTGCTGTCTGTAGCTGGTAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22882043 58 + 22939663 AGAAACAC--------CCACTGT---TTCTGCACGAGGGTGATGCAGACAGCACTGTC-CTGGCTGGCAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825791 20 + 182113224 -----------------------------------------------CCAGGGGTGACT---GCTACTGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47637879 26 + 47698779 --------------------------------------------ATGCCAGCGTTGCCCCTGGTGGGTGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 306051 9 - 397369 -------------------------------------------------------------AGGTGGTTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1894485 351 - 2029793 I e micMur3.chr18 56903829 302 + 57149010 I a score=328959.000000 s hg38.chr20_KI270870v1_alt 148800 26 + 183433 GGGCTTGTCTCAGGTCACGTGGGGAC s panTro5.chr20 66484222 26 + 66533130 GGGCTTGTCTCAGGTCACGTGGGGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151697 26 + 62195757 GGGCTTGTCTCAGGTCACGTGGGGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537969 26 - 578057 GGGCTTGTCTCAGGTCATGTGGGGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059544 26 - 110113093 GGGCTTATCTCGAGTCACCTGGGGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797112 26 - 92844088 GGGCTTGTCTCGGGTCACACGGGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462639 26 + 96509753 GGGCTTGTCTCGGGTCACACGGGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933573 26 - 16982598 GGGCTTGTCTCGGGTCACACGGGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734572 26 - 3785965 GGGCTTGTCTCGGGTCACACGGGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326387 26 - 90373283 GGGCTTGTCTCGGGTCACACGGGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126234 26 - 179258 GGGCTTGTCTCGGGTCACACGGGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602273 26 - 5823884 GGGCTTGTCTCGGGTCACACGGGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83055 26 + 372756 GGGCTTGTCTTGGGTCACGTGGGGAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318180 25 + 16356641 GGGCTCGT-TCGGGTCACGTGGGGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187098 26 + 1231380 GGGCTTGTCTCGGGTCACGTGGGGAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718658 26 + 11732439 GGGCTTGTCCCGGGTCACGTGGGGAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56904131 26 + 57149010 GGGCTTGTCTCAGGTCTCGTGGGGAC i micMur3.chr18 I 302 I 36 s otoGar3.GL873542 22882101 26 + 22939663 GAGCTCTTCTTGGGTCATGTAGGGAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825811 11 + 182113224 TGTCCTGTTGC--------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47637905 26 + 47698779 GGGCTTGTGTCAGGTGGCACAGGAAG i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 306060 20 - 397369 ------GTTGCAGGCCACGTGGGGAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1894485 351 - 2029793 I a score=574430.000000 s hg38.chr20_KI270870v1_alt 148826 57 + 183433 ATAGGTTTGATGCTCCCACATCAGGCTCTGCGG-----------TGTGGGGCCCACTGCATGGACGGA s panTro5.chr20 66484248 57 + 66533130 ATAGGTTTGATGCTCCCACATCAGGCTCTGCGG-----------TGTGGGGCCCACTGCATGGACGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151723 57 + 62195757 ATAGGTTTGATGCTCCCACATCAGGCTCTGCGG-----------TGTGGGGCCCACTGCATGGACGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 537995 57 - 578057 ATAGGTTTGATGCTCCCACATCAGGCTCTGCGG-----------TGTGGGGCCCACTGCACGGATGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059570 57 - 110113093 ATAGGTTGGATGCTCCCACATCAGGGTCTGTGG-----------TGTGGGGCCCACTGCATGGATGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797138 57 - 92844088 ACAGGTTTGATGCTCCCACATCAGGTTCTTTGG-----------TGTGGGGCCCACTGCATGGATGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462665 57 + 96509753 ACAGGTTTGATGCTCCCACATCAGGTTCTTTGG-----------TGTGGGGCCCACTGCATGGATGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933599 57 - 16982598 ACAGGTTTGATGCTCCCACATCAGGTTCTTTGG-----------TGTGGGGCCCACTGCATGGATGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734598 57 - 3785965 ACAGGTTTGATGCTCCCACATCAGGTTCTTTGG-----------TGTGGGGCCCACTGCATGGATGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326413 57 - 90373283 ACAGGTTTGATGCTCCCACATCAGGTTCTTTGG-----------TGTGGGGCCCACTGCATGGATGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126260 57 - 179258 ACAGGTTTGATGCTCCCACATCAGGTTCTTTGG-----------TGTGGGGCCCACTGCATGGATGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602299 57 - 5823884 ACAGGTTTGATGCTCCCACATCAGGTTCTTTGG-----------TGTGGGGCCCACTGCATGGATGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83081 55 + 372756 ATAGGTC--ACACTCCCACATCAGGTTCTGTGG-----------CATGGCGCCCACTGAATGGATGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318205 57 + 16356641 ATGGGTTTGATGCTCTCACATCAGCTTCTGTGG-----------GGTGGGGCCCTCTGAATGGATGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187124 57 + 1231380 ATAGGTTTGATGCTCCCACATCAGCTGCTGTGG-----------TGTGGGGCCCACTGAATGGATGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718684 57 + 11732439 GTAGGTTTGATGCTCCCACATCAGGTTCTGTGG-----------TGTGGCGCCCACTGAACGGACGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22882127 13 + 22939663 ACAGGT-------------------------------------------------------GGACAGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825822 54 + 182113224 CTGGGGTTAAGGCTTTCTCACTAGTTTCTACTA-----------TATGGGGTCCACTGTA---GTAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47637933 68 + 47698779 ATGGGCTTAATGTTCATCCGTAGATTTCTGTGGCTTCTGAAAATCATGGGACCCATTGCACGGATGGG i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 306080 63 - 397369 GAGGGTCTGACACCCCC-CACTGGTCTCCACTGCATTTGGAAACCACGGGGCCCTCAGCAAGGG---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1894485 351 - 2029793 I e micMur3.chr18 56904157 36 + 57149010 I a score=3386316.000000 s hg38.chr20_KI270870v1_alt 148883 164 + 183433 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGG------------ACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG s panTro5.chr20 66484305 164 + 66533130 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGG------------ACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151780 164 + 62195757 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGG------------ACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538052 164 - 578057 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCGGG------------ACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059627 164 - 110113093 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGG------------ACCCAGAGAACAAGGACCTGCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797195 176 - 92844088 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462722 176 + 96509753 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933656 176 - 16982598 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734655 176 - 3785965 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326470 176 - 90373283 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126317 176 - 179258 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602356 176 - 5823884 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATATGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCGTGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83136 176 + 372756 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATCTGTGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCAAGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318262 176 + 16356641 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATCTGTGAACAGAATTTCGATGCCTACGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAGGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCAAGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187181 176 + 1231380 TCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATCTGCGAACAGAATTTCGATGCCTATGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAAGTCTAGGCCGAGCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718741 176 + 11732439 GCTTGCTAACCTGGTTCTGTTCTCTAGGAGCCAATCTGCGAACAGAATTTCGATGCCTATGTGAGCATCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCGGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGGCCCAGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56904193 176 + 57149010 GCTTGCTAACCTGGTTCTGCTCTCCAGGAGCCAATATGCGAACAGAACTTCGATGCCTATGTGAGCACGCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCTGCGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCCGTGAGGGGCATCCAGGTCTAGGCCGTGTG i micMur3.chr18 I 36 I 56 s proCoq1.NW_012150197v1 1894836 176 - 2029793 GCTTGCTAACCTGGTTCTGCTCTCTAGGAGCCAATATGTGAACAGAATTTCGACGCCTACGTGAGCACACTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCTGAGAACAAGGACCTCCTGGAGAGCATCAAGCAGGCCGTGAGGGGCATCCAGGTCTAGGCCATGCT i proCoq1.NW_012150197v1 I 351 C 0 s otoGar3.GL873542 22882140 175 + 22939663 GCTTGCTAACCTGGTTCTGTCTTCTAGGAGCCAATATGTGAACAGAATTTCGATGCCTACGTGAGCACCCTCACTGATATGTACTCCAACCAGGAGTGCTACCAAAACCCTGAGAACAAGGCCCTCCTGGAGAGCATCAAGCAGGCTGTGAGGGGCATCCAGGTCTAGACCATGC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181825876 176 + 182113224 GCCTGCTAATCTGGTTCTGTTCTCTAGGAACCAATATGTGAACAGAATTTTGACGCCTATGTGAACACCCTCACTGACATGTACTCCAATCAGGACTGCTACCAGAATCCGGAGAACAAAGGCCTTCTGGAAACGATCAAGCAAGCTGTGAGGGGCATTCAGGTCTAGGCTGCACT i mm10.chr2 C 0 C 0 s canFam3.chr24 47638001 176 + 47698779 CCTTGCTCACCTGCTTCTGTTCTCCAGGAGCCAATATGTGAGCAGAACTTCGATGCCTACGTGAGCACCCTCACCGACATGTACTCCAACCAGGAGTGCTACCAGAACCCCGAGAACAAGGACCTCCTGGAGAGCATCAAACGGGCTGTGAGGGGCATCCAGGTCTAGACCTCGTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 306143 176 - 397369 GGCTGTTAATCCGGCTCTGTTTTCCAGGAGCCAATTTGTGAGCAGAATTTCGATGCATACGTGAGCACCCTCACCGACATGTGCTCCAACCAGGAGTGCTACCAGAACCCTGCGAACAAGGACCTGCTGGAGAGCATCAAGCAGGCCGTGAGGGGCATCCAAGTCTAGGCCACGTC i dasNov3.JH569290 C 0 C 0 a score=121041.000000 s hg38.chr20_KI270870v1_alt 149047 13 + 183433 GTACCCAGAAGTG s panTro5.chr20 66484469 13 + 66533130 GTACCCAGAAGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151944 13 + 62195757 GTACCCGGAAGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538216 13 - 578057 GTACCCAGAAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059791 13 - 110113093 GTACCCAGAAGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797371 13 - 92844088 GTACCCAGGAGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462898 13 + 96509753 GTACCCAGGAGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933832 13 - 16982598 GTACCCAGGAGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734831 13 - 3785965 GTACCCAGGAGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326646 13 - 90373283 GTACCCAGGAGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126493 13 - 179258 GTACCCAGGAGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602532 13 - 5823884 GCACCCGGGAGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83312 13 + 372756 GTACCCAGGAGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318438 13 + 16356641 GTACCCAGGAGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187357 13 + 1231380 ATACCCAGGAGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718917 12 + 11732439 GTACCC-GGAGCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1895012 11 - 2029793 --GTCCTGAGGAG i proCoq1.NW_012150197v1 C 0 I 21 s otoGar3.GL873542 22882315 12 + 22939663 -CTCCCTGAAGAG i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181826052 13 + 182113224 GCACACAGGAGTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47638177 10 + 47698779 -ACCCCCGAAG-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 306319 11 - 397369 --GCCGATGAGCC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56904369 56 + 57149010 I a score=165674.000000 s hg38.chr20_KI270870v1_alt 149060 21 + 183433 ----------TCCCAGCCCACCA--------------------------------CACCGTTT s panTro5.chr20 66484482 21 + 66533130 ----------TCCCAGCCCACCA--------------------------------CACCGTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151957 21 + 62195757 ----------TCCCAGCCCACCA--------------------------------CACCGTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538229 21 - 578057 ----------TCCCAGCCCACCA--------------------------------CACCGTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059804 21 - 110113093 ----------TCCCAGCCCACCA--------------------------------CACCGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797384 21 - 92844088 ----------TCCCAGCCCACCA--------------------------------CACCGTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462911 21 + 96509753 ----------TCCCAGCCCACCA--------------------------------CACCGTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933845 21 - 16982598 ----------TCCCAGCCCACCA--------------------------------CACCGTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734844 21 - 3785965 ----------CCCCAGCCCACCA--------------------------------CACTGTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326659 21 - 90373283 ----------TCCCAGCCCACCA--------------------------------CACCGTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126506 21 - 179258 ----------TCCCAGCCCACCA--------------------------------CACCGTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602545 21 - 5823884 ----------TCCCAGCCCACCA--------------------------------CACCGTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83325 21 + 372756 ----------TCCCAGCGCTCCA--------------------------------CACCATTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318451 21 + 16356641 ----------TCCCAGCCCTCCA--------------------------------CACCGTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187370 21 + 1231380 ----------TCCCAGCCCTCCA--------------------------------CACTGTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718929 21 + 11732439 ----------TCCCAGCCCTCCA--------------------------------CACCGTTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22882329 19 + 22939663 ----------CCCCCGCCAACT---------------------------------TGTCATC- i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181826065 1 + 182113224 ------------------------------------------------------------T-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47638187 51 + 47698779 ------------CCACCCCACCAACCGGGACATCTGGGGCACCCCAACGTGACTCCAGTGTTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 306330 31 - 397369 GCCTCGCCAGCACGGGCCGGACG--------------------------------CGTCGTCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1895023 21 - 2029793 I e micMur3.chr18 56904369 56 + 57149010 I a score=322821.000000 s hg38.chr20_KI270870v1_alt 149081 28 + 183433 ---ACCTCC------------CTCGCCCTGCCCCGCACCGTGG------ s panTro5.chr20 66484503 28 + 66533130 ---ACCTCC------------CTCGCCCTGCCCCGCACCGTGG------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62151978 28 + 62195757 ---ACCTCC------------CTCGCCCTGCCCCGCACCGTGG------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538250 28 - 578057 ---ACCTCC------------CTCGCCCTGCCCCGCACCGTGG------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059825 28 - 110113093 ---GCCTGC------------CCCGCCCTGCCCCGCGCCGTGG------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797405 28 - 92844088 ---ACCTCC------------CCCGCCCTGCCCCACACCGTGG------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462932 28 + 96509753 ---ACCTCC------------CCCGCCCTGCCCCACACCGTGG------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933866 28 - 16982598 ---ACCTCC------------CCCGCCCTGCCCCACACCGTGG------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734865 28 - 3785965 ---ACCTCC------------CCCGCCCTGCCCCACACCGTGG------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326680 28 - 90373283 ---ACCTCC------------CCCGCCCTGCCCCACACCGTGG------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126527 28 - 179258 ---ACCTCC------------CCCGCCCTGCCCCATACCGTGG------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602566 28 - 5823884 ---ACCTCC------------CCCGCCCTGCCCCACACCGTGG------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83346 28 + 372756 ---ACCTCC------------CCTGCCCCACCCTGCACTGTGG------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318472 28 + 16356641 ---ACCTCC------------CCCGCCCCACCCCGTACCGTGG------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187391 28 + 1231380 ---ACCTCC------------CCCGCCCCACCCCGCACCGTGG------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718950 26 + 11732439 ---ACCTCC------------CCT--CCCACCCCACACCGTGG------ i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1895044 24 - 2029793 ---ATCTCC------------CACGCCCTGCCCT----CGTAG------ i proCoq1.NW_012150197v1 I 21 I 2 s otoGar3.GL873542 22882348 24 + 22939663 ---ACCTCC------------CACGCCCTGCCCG----TGCAG------ i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181826066 19 + 182113224 ------------------------GCTCTGCTCCTCACAGCAA------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47638238 27 + 47698779 ---ACCTCC------------CTCGCCCTGCCCC-CGCAGCGG------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 306361 49 - 397369 GCTCCCTTCAGTTGTTTACTGCCCGCCCTGTGCCTCCCCGTGGCAGTGG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56904369 56 + 57149010 I a score=5552890.000000 s hg38.chr20_KI270870v1_alt 149109 329 + 183433 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTTGGGGCCC-GGTGTGGCCGCGGGCGG-GTTTATCCAAAGGGATGGCTGGAAATTGGCCGCTCCCACGAGGCT---------CCCTCCAGGCTTGGGGCCGTGGTG-GCC---CTATCTGTGTGC------ATAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAggctgggagggtagccgtg---------------agcgtggtgggtgggtggtgtgag----------------- s panTro5.chr20 66484531 329 + 66533130 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTTGGGGCCC-GGTGTGGCCGCGGGCGG-GTTTATCCAAAGGGATGGCTGGAAATCGGCCGCTCCCACGAGGCT---------CCCTCCAGGCTTGGGGCCGTGGTG-GCC---CTATCTGTGTGC------ATAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAggctgggagggtagccgtg---------------agcgtggtgggtgggtggtgtgag----------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62152006 329 + 62195757 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTCTGGGGCCC-GGTGTGGCCGCGGGCGG-GTTTATCCAAAGGGATGGCTGGAAATCGGCCGCTCCCACGAGGCT---------CCCTCCAGGCTTGGGGCCGTGGTG-GCC---CTATCTGTGTGC------ATAG--GGGCACTGAAGAATTACAGAGTGATTTATTTTTGTTTT---------------------CTGAAAGACATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGCTGGGTGGGTGGTGTGAG----------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538278 329 - 578057 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTTGGGGCCC-GGTGTGGCCTCGGGTGG-GTTTATCCAAAGGGATGGCTGGAAACCGGCCGCTCCCACGAGGCT---------CCCTCCAGGCTTGGGGCCGTGGTG-GCC---CTATCTGTGTGC------ATAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTGCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGGTGGGCGGGTGGTGTGAG----------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110059853 328 - 110113093 GGATGCCCAACTCGCAGTGACTTCCT----------------------------GTTTGCGGCCG-GGTGTGGCCTCGGGCGG-GTTTATCCAAAGGGACGGCTGGAAAATGGCCTCTCCCACGAGGCC---------CCCTCCAGGCTCGGGGCCGTGGTG-GCC---CTGTCCGTGTGC------ATAG--GGGCACTGAAGAATTACAAAGCGATTTATTTTTGTTTT----------------------TGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTGGCCGTG---------------AGCGTGGTGGGCGGGTGGTGTGAG----------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797433 329 - 92844088 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTCGCGGCCC-GGTGTGGCCTCGGGTGG-GTTTATCCAAAGGGATGGCTGGAAATCAGCCTCTCCCACGATGCT---------CCCTCCAGGCTTGGGGCCGTGGCG-GCC---CCATCTGTGTGC------ACAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGGTGGGCGGGTGGTGTGAG----------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96462960 329 + 96509753 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTCGCGGCCC-GGTGTGGCCTCGGGTGG-GTTTATCCAAAGGGATGGCTGGAAATCAGCCTCTCCCACGATGCT---------CCCTCCAGGCTTGGGGCCGTGGCG-GCC---CCATCTGTGTGC------ACAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGGTGGGCGGGTGGTGTGAG----------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16933894 329 - 16982598 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTCGCGGCCC-GGTGTGGCCTCGGGTGG-GTTTATCCAAAGGGATGGCTGGAAATCAGCCTCTCCCACGATGCT---------CCCTCCAGGCTTGGGGCCGTGGCG-GCC---CCATCTGTGCGC------ACAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGGTGGGCGGGTGGTGTGAG----------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3734893 329 - 3785965 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTCGCGGCCC-GGTGTGGCCTCGGGTGG-GTTTATCCAAAGGGATGGCTGGAAATCAGCCTCTCCCACGATGCT---------CCCTCCAGGCTTGGGGCCGTGGCG-GCC---CCATCTGTGCGC------ACAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGGTGGGCGGGTGGTGTGAG----------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90326708 329 - 90373283 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTCGCGGCCC-GGTGTGGCCTCGGGTGG-GTTTATCCAAAGGGATGGCTGGAAATCAGCCTCTCCCACGATGCT---------CCCTCCAGGCTTGGGGCCGTGGCG-GCC---CCATCTGTGCGC------ACAG--GGGCACCGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGGTGGGCGGGTGGTGTGAG----------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126555 329 - 179258 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTCGCGGCCC-GGTGTGGCCTCGGGTGG-GTTTATCCAAAGGGATGGCTGGAAATCAGCCTCTCCCACGATGCT---------CCCTCCAGGCTTGGGGCCGTGGCG-GCC---CCATCTGTGCGC------ACAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGGTGGGCGGGTGGTGTGAG----------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602594 329 - 5823884 GGATGCCCAACTCACAGTGACTTCCC----------------------------GTTCGCGGCCC-GGTGTGGCCTCGGGTGG-GTTTATCCAAAGGGATGGCTGGAAATCGGCCTCTCCCACGATGCT---------CCCTCCAGGCTTGGGGCCGTGGCA-GCC---CCATCCATGTGC------ATAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGGTGGGCGGGTGGTGTGAG----------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83374 329 + 372756 GGATTCCCAACTCACAGTGACTACCT----------------------------GTTTGTGGCCT-GGTGTGGCCTCGGGCAG-GTTTATCCAAAGGGATGCCTGGAAATTGGCTTCTCCCATGATGGT---------CCCTCTAGGCTTGGGGCCACGGCA-GCC---CCATCCTTGTGC------ATAG--GGGCACTGAAGAATTACAAAGTAATTTATTTTTGTTTT---------------------CTGAACGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAACCGTG---------------AGCGTGGTGGGCGGGTGATTTGAG----------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318500 329 + 16356641 GGATCCCCAACTCACAGTGACTTCCC----------------------------ATTCGTGGCCT-GGTGTGGCCTCGGGCGG-GTTTATCCAAAGGGATGCCTGGAAATTGGCTTCTCCCACGATGCT---------CCCTCCAGGCTTGGGGCCACGGCA-GCC---CCATCCATGTGC------ATAG--GGGCACTGAAGAATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAACACAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTAGCCGTG---------------AGCGTGGTGGGCGGGTGGTTCGAG----------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187419 329 + 1231380 GGATCCCCAACTCACAGTGACTTCCC----------------------------GCTCGCGGCTT-GGTGTGGCCTCGGGCGG-GTTTATCCAAAGGGATGCCTGGAAATTGGCTTCTCCCACGATGCT---------CCCTCCAGGCTTGGGGCCACGGCA-GCC---CCATCCACGTGC------ATTG--GGGCACTGAAGAATTACAAAGGGATTTATTTTTGTTTT---------------------CTGAACGCAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAGCCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTCGCCGTG---------------AGCATGGTGGGCGGGTGGTTCGAG----------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2718976 328 + 11732439 GGATCCCCAACTCACAGTGACTTCCT----------------------------GTTCGTGGCCT-GGTGTGGCCTTGGGCGG-GTTTATCCAAAGGGATGCCTGGAAATTGGCTTCTCCCACGATGCT---------CCCTCCAGGCTTGGGG-CACGGCA-GCC---CCATCCATGTGC------ATAG--GGGCGCTGAAGAATTACAAAGCGATTTATTTTTGTTTT---------------------CTGAACGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGAGGGTGGCCGTG---------------AGCGTGGTGGGCGGGTGGTTCGAG----------------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56904425 324 + 57149010 GGATCCCCAACTCACAGTGACTTCTC----------------------------GTTCGAAGCCC-AGCGTGGCCTCGGGCGG-GTTTATCCAAAGGGGTGCCTGGAAATTAGTGTCCCCCACGATGCC---------CCTGCCAGGCTTGGGGCTGTGAGC-CAC---CCACGA-GGGGC------ACTG--GGGCACTGAAGTATTACAAAGTGATTTATTTTTGTTTT---------------------CTGGAAGAAATCCGAAAAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTA---TTTTGTCTGTCGAGGCTGGGAGGGTGGCCGCG---------------GGCACAGT-GGCGGGTGGTGGGAG----------------- i micMur3.chr18 I 56 I 3 s proCoq1.NW_012150197v1 1895070 325 - 2029793 GGATCCCCAACTCACAGTGACTTATC----------------------------GTTCGAAGCCC-AGTGCGGCCTCGGGCGA-GTTTATCCAAAGGGGTGCCTGGAAATCAGTGTCTCCCATGATGCC---------CCCGCCAGGCTTGGGGCTGTGACC-CAC---CCACGAGGGGGC------ACTG--GGGCACTGAAGCATTACAAAGTGATTTATTTTTGTTTT---------------------CTGGAAGAAATCTGAAAAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTA---TTTGGTCTGTTGAGGCTGGGAGGGTGGCCGTG---------------GGCACCGT-GGCGGGTGGTGGgag----------------- i proCoq1.NW_012150197v1 I 2 I 29 s otoGar3.GL873542 22882375 342 + 22939663 GGATCCCCAATTCACAGTGACTTATC----------------------------ATTTGCAGCAC-AGCGCAGCCTTGGGTG--GTTCATCTAAAAGGGTGCCTGGAAATCAGTGTCGCCCACGAAGCC---------CCCACCAGGCTTGGAGCCATGACCTCTC---CCACAAAAGGGT------ACGG--GGTCACTGAAGTATTACAAAGCGATTTATTTTTGTTTT---------------------CTGGAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCTTTTGTCTGTCAAGGCTGGGAGGGCGGCTGTAGCCTAGGGCGGGTGTGGCATAG--GGTGGCTGGTGTGAG----------------- i otoGar3.GL873542 I 3 I 2 s mm10.chr2 181826085 353 + 182113224 -GGACCCTGACTTCTAGCTACTTCTA----------------------------ATTGGAAGCCTGGGTGCAGCCTTGTGCA--GCTTACCCAAAGGGGAGCCTGGGAATCAGTGTCTCCTATGATGTC---------CTCATTAGGCCCAGG--CATGAAG-ACCTCTCTGTGTGAGTGC------CTGG--GGACACTGAAGTATTGCAAAGTGACttatttttgtttttgttctttgttttttgtttttTTAAAAGAAGTCTGAAGAGCAGCTCAAAGTCTCCGGTGG-AAGCTC-ATGGACAAGGTTCTCACTCAGGGAAG-TTTTGGAGTTTGCAGCCACAGTATTCCATTGTTTGTCAAGGTTGGGAGGGCAGCCATG---------------GCCCTGCTGGGT-GTTAGTCTCAG----------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47638265 327 + 47698779 AGATTCCCGACTCACAGTGACTTCTG----------------------------GTTGGCAGCCC-AGGGCAGCCTCAGGTGG-GCTTATCCAAAGGGGTGCCTGGAAATCAGTGTCTTTCCC-ATGTG---------CTTGCCAGGCTGGAGGCCTCGACC-TCC---CCACACGAGCGC------AGGGCAAGGCA-GGAAGTATTACAAAGTGATTTATTTTTGTTTT---------------------TTGAAAGAAATCTGAAGAGCAGCTCAAAGTCTCCAGTGG-AAGCTC-ATGGACAAGGTT----CTCAGGGAAG-TTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGAGGCTGGGGGGGTAGCCGTG---------------GGCACGG--GGCGGGTGGTGCGTG----------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 306410 387 - 397369 GGGCTCTGGACTCACAGTGACTTTTCCCTGGGCAGCCTGGGGGGTGCCGGGAGAGGCCGGGCCCA-GGGGAGGCCTTGGGCCGCGTTTATCCAAAGGGGTGCCTAGAAATCAGTGTTTCCCACGTTGCTGAGCAGTGGCTGCTCAGGGCCCTGGCCACAGAG-GGC---TTGGAGAGCTGCTGAAGGGGAG--AGGCACTGAAGTATTACAAAGTGATTTATTTTTGTTTT---------------------CTGAAAGAAATCTGAAGAGCAGTTCAAAACCTCCAGTGGAAAGCTCAACGGAAAAGGTT----CTCAGGGAAGCTTTTGGAGTTTGCAACCACAGTATTCCTTTGTCTGTCGTAGCTGGGAGTGTTGCCGTG---------------GGT------GGCAGGTGGTGTGCGGTGCAGGGCGGGGTGGG i dasNov3.JH569290 C 0 C 0 a score=171360.000000 s hg38.chr20_KI270870v1_alt 149438 15 + 183433 tggCA-TCTTGGCCTG s panTro5.chr20 66484860 15 + 66533130 tggCA-TCTTGGCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62152335 15 + 62195757 TGGCA-TCTTGGCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538607 15 - 578057 TGGCA-TCTTGACCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110060181 15 - 110113093 TGGCA-TCTTGGCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797762 15 - 92844088 TGGCA-TCTTGGCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96463289 15 + 96509753 TGGCA-TCTTGGCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16934223 15 - 16982598 TGGCA-TCTTGGCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3735222 15 - 3785965 TGGCA-TCTTGGCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90327037 15 - 90373283 TGGCA-TCTTGGCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126884 15 - 179258 TGGCA-TCTTGGCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602923 15 - 5823884 TGGCA-TCTTGGCCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83703 15 + 372756 TGGCA-TCTTGGCCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318829 15 + 16356641 TGGCA-TCTTGGCCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187748 15 + 1231380 TGGCA-TCTTGGCCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2719304 15 + 11732439 TGGCA-TCTTGGCCTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22882719 15 + 22939663 TAGAG-TCTCAGCCTG i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181826438 3 + 182113224 -------------CAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47638592 16 + 47698779 TGACAGTGTCAGCCTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 306797 14 - 397369 GTGTG-TTTCAGTCT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1895395 29 - 2029793 I e micMur3.chr18 56904749 3 + 57149010 I a score=354770.000000 s hg38.chr20_KI270870v1_alt 149453 27 + 183433 GAGGACAC----GCCTGGGGCAGCGTGTCTG s panTro5.chr20 66484875 27 + 66533130 GAGGACAC----GCCTGGGGCAGCGTGTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62152350 27 + 62195757 GAGGACAC----GCCTGGGGCAGCGTGTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538622 27 - 578057 GAGGACAC----GCCTGGGGCAGCGTGTCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110060196 27 - 110113093 GAGGACAC----GCCTGGGGCAGCGTGTCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797777 27 - 92844088 GAGGACAT----GCCCGGGGCAGCGTGCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96463304 27 + 96509753 GAGGACAT----GCCCGGGGCAGCGTGCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16934238 27 - 16982598 GAGGACAT----GCCCGGGGCAGCGTGCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3735237 27 - 3785965 GAGGACAT----GCCCGGGGCAGCGTGCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90327052 27 - 90373283 GAGGACAT----GCCCGGGGCAGCGTGCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126899 27 - 179258 GAGGACAT----GCCCGGGGCAGCGTGCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602938 27 - 5823884 GAGGACAT----GCCCGGGGCAGCGTGTCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83718 27 + 372756 GAGGATGT----GCCCGGGGCAGTGTGTCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318844 27 + 16356641 GAGGATGT----GCCCGGGGCAGCGTGTCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187763 27 + 1231380 GAGGTTGT----GCCCGGGGCAGCGTGTCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2719319 27 + 11732439 GAGGATGT----GCCCGGGGCAGCGTGTCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56904752 27 + 57149010 GAGGCTCA----GCCTGGGGCAGCGTGTCTG i micMur3.chr18 I 3 C 0 s otoGar3.GL873542 22882734 27 + 22939663 GAGGATGC----GCCTGGGGCAGTGTATCAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181826441 21 + 182113224 GAGGGCAT----GCCTAG------GTTTCTG i mm10.chr2 C 0 I 4 s canFam3.chr24 47638608 27 + 47698779 GAGCACCT----GCCCCAGGGTGCGCGTCTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 306811 26 - 397369 GAGGGTGCTTCAGCCGGGACCATCCC----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1895395 29 - 2029793 I a score=2592327.000000 s hg38.chr20_KI270870v1_alt 149480 177 + 183433 TGCTCAGTGAGG-GCCGATGAAGAAAGTGCGTTTTC--TGTTTTCATTTAATTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTTCTAGAGGGAA---AGTTAGGAATAGGCCTCCCAGAGGA-TACTC--CAGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--ACCTGG s panTro5.chr20 66484902 177 + 66533130 TGCTCAGTGAGG-GCCGCTGAAGAAAGTGCGTTTTC--TGTTTTCATTTAATTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTTCTAGAGGGAA---AGTTAGGAATAGGCCTCCCAGAGGA-TACTC--CAGGCAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--AGCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62152377 177 + 62195757 TGCTCAGTGAGG-GCCGCTGAAGAAAGTGCGTTTTC--TGTTTTCATGTAATTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTTCTAGAGGGAA---AGTTAGGAATAGGCCTCCCAGAGGA-TACTC--CAGGCAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--AGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538649 177 - 578057 TGCTCAGTGAGG-GCCGCTGAAGAAAGTGCGTTTTC--TGTTTTCATTTAATTCGGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCAGAGGGAA---AGTTAGGAATAGGCCTCCCAGAGGA-TACTC--CAGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--ACCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110060223 177 - 110113093 TGCTCAGTGATG-GCCGCGGAGGAAAGTGCGTTTTC--TGTTTTCATCTAACTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCAGAGGGAA---AGTTAGGAGTAGGCCTCCCAGAGGA-CACTC--CAGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--ACCTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797804 177 - 92844088 TGCTCAGTGAGG-GCGGCTGAATCAAGTGCGTTTTC--TGTTTTCATTTAATTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCAGAGGGAA---AGTTAGGAATGTGCCTCCCAGAGGA-CACTC--CGGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGA--------AATTTTA--ACCTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96463331 177 + 96509753 TGCTCAGTGAGG-GCGGCTGAATCAAGTGCGTTTTC--TGTTTTCATTTAATTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCAGAGGGAA---AGTTAGGAATGTGCCTCCCAGAGGA-CACTC--CGGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGA--------AATTTTA--ACCTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16934265 177 - 16982598 TGCTCAGTGAGG-GCGGCTGAATCAAGTGCGTTTTC--TGTTTTCATTTAATTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCAGAGGGAA---AGTTAGGAATGTGCCTCCCAGAGGA-CACTC--CGGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--ACCTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3735264 177 - 3785965 TGCTCAGTGAGG-GCGGCTGAATCAAGTGCGTTTTC--TGTTTTCATTTAATTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCAGAGGGAA---AGTTAGGAATGTGCCTCCCAGAGGA-CACTC--CGGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--ACCTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90327079 177 - 90373283 TGCTCAGTGAGG-GCGGCTGAAGCAAGTGCGTTTTC--TGTTTTCATTTAATTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCAGAGGGAA---AGTTAGGAATGGGCCTCCCAGAGGA-CACTC--CAGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--ACCTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 126926 177 - 179258 TGCTCAGTGAGG-GCGGCTGAATCAAGTGCGTTTTC--TGTTTTCATTTAATTCAGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCAGAGGGAA---AGTTAGGAATGTGCCTCCCAGAGGA-CACTC--CGGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--ACCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5602965 177 - 5823884 TGCTCAGTGAGG-GCGGCGGAAGCAAGTGCGTTTTC--TGTTTTCATTTAATTCAGTTTTGTGTTAAGGGTGGAACCAAGCTCTGTCCCAGAGGGAA---AGTTAGGAATAGGCCTCCCAGAGGA-CACTC--CAGACAGTTGACAAGCATC-GCAG-CCCCTGTCAGGTCAAGG--------AATTTTA--ACCTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83745 176 + 372756 TGCTCAGTGA-G-GCCCCTGAAGCAAGTGTGTTTTC--TGTTTCCATTTAATTCGGTTTTGCGTTAAGGGTGGAACAAAGCTCTGTCCCTGAGGGAA---AGTTAGGAATAGGCCTCCCAGAGGA-CACTC--CAGACAGTTGGAAAGCATC-GTAG-CTGCTGTCAAGTCAAGG--------AATTTTA--GCCTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16318871 176 + 16356641 TGCTCAGTGA-G-GCCCCTGAAGCAAGTGTGTTTTC--TGTTTTCGTTTAATTCGGTTTTGTGTTAAGGGTGGAATAAAGCTCTGTCCCTGAGGGAA---AGTTAGGAATAGGCCTCCCAGAGGA-CACTC--CAGACAGCTGGCAAGCATC-GTAG-CCACTGTCAAGTCAAGG--------AATTTTA--GCCTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187790 176 + 1231380 TGCTCAGTGA-G-GCCCCTGAAGCAAGTGTGTTTTC--TGTTTTCGTTTAATTCGGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCTGAGGGAA---AGTCAGGAATAGGCCTCCCAGAGGA-CACTC--CAGACAGTTGGCAAGCATC-GTAG-CCACTGTGAAGTCAAGG--------AATTTTA--GCCTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2719346 176 + 11732439 TGCTCAGTGA-G-GCCCCTGAAGCAAGTGTGTTTTC--TGTTTTCGTTTAATTCGGTTTTGTGTTAAGGGTGGAACAAAGCTCTGTCCCTGAGGGAA---AGTTAGGAATAGGCCTCCCCGAGGA-CACTC--CAGACAGTTGGCAGGCATC-GTGG-CCGCTGTCAAGTCAAGG--------AATTTTA--GCCTGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56904779 177 + 57149010 TGCTCGGTGAGG-GCC-CTGTGGCACGTGTGTTTTC--TGTTTTTGTTTAATTCCG-TTTGTGTTAAGGGTGGAACAAAGCTCTGTTCCAGAGGGAA---AGTCAGGAGCAGGCCTTCCAGACTACCACTC--GCGATGGTTGGCAAGCATC-GCGGCCCACAGTCAGCTCAAGG--------AATTTAA--GCCTGG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1895424 176 - 2029793 tgcTCGGTGAGG-GCC-CTGTGGCACGTGTGTTTTC--TGTTTTTGTTTAATTCGG-TTTGTGTTAAGGGTGGAACGAAGCTCTGTTCCAGAGGGAA---AGTTAGGAACAGGCCTCCCAGACGACCACTC--AGGAGAGCTGACGAGCGTC-GCAG-CCACAGTCAGCTCAAGG--------GATTTAA--ACCTGG i proCoq1.NW_012150197v1 I 29 C 0 s otoGar3.GL873542 22882761 178 + 22939663 TGCTCAGTAAGGAGGC-CTGTGGCACGTGTGTTTTC--TGTTTTTGTTCAATTTAATTTTGCGTTAGAGGTGGAACAAGGGTCTGTTCCATAGGGAA---AGTGAGGAGTAGGCCTTCCAGACGACCACTC--CAGATA-TTCACAAGCATC-ATAGCCCACAGTTAGTTCAAGA--------AATTTAA--ACTTGG i otoGar3.GL873542 C 0 I 205 s mm10.chr2 181826466 180 + 182113224 TGCTCACTGA-A-GCCCACATGACAAGTATGTTTTG--TGTTTTCATTTAATTCAACTTTGTGTTAAAGGT-GCACAATACTCTGCTTCAGAGGTGA---ATCTAGGAACAGGCTTCCCAGATGG-CAGTC--TACACAGTTGATGAGCATC-ATAG---AAAGTCAGCTGGAGGTTTTTTTTTGTTTTC--AGTTG- i mm10.chr2 I 4 C 0 s canFam3.chr24 47638635 137 + 47698779 --CTCAGTGA-G-GTCAATGTGGCAAGTGTGTTTTC--TGTTTTCATTTAATTCAGTTTTGTCTTAAGGATGGAGCAAAGCACCGTTCCAGAGG-------GTTAGAAATAGACCT----GAAGC---------------------------------CCACGGCCAACTTGAGG---------ACTCTA--ACCTGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 306837 187 - 397369 TGACCCGTGAGG-GCCATCGTGGCAAGTGCGTTTTTAAAATTTTTGTTTGATTCAGTTTTGTGTTAAGGACTGAACAAAGCACTGTTTCAGAGGGAAAATAATTAGGAATAGACTT-CCAGAGAATCACTCTTTAGACCATTGATGAGCATCTGTGG-CCCCTGTCAACTCCAAG--------TGGGTTAGCGCCTGT i dasNov3.JH569290 C 0 C 0 a score=437243.000000 s hg38.chr20_KI270870v1_alt 149657 32 + 183433 GAGACTCCTGAAAAT--CAGCCTAATG-----------TCTGGGG s panTro5.chr20 66485079 32 + 66533130 GAGACTCCTGAAAAT--CAGCCTAATG-----------TCTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62152554 32 + 62195757 GAGACTCCTGAAAAT--CAGCCTAATG-----------TCTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538826 32 - 578057 GAGACTCCTGAAAAT--CAGCCTAATG-----------TCTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110060400 32 - 110113093 GAGACTCCTGAAAAT--CAGCCTAATA-----------TCTGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92797981 32 - 92844088 GAGACTCCTGAAAAT--CAGCCTAGTG-----------TCTGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96463508 32 + 96509753 GAGACTCCTGAAAAT--CAGCCTAGTG-----------TCTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16934442 32 - 16982598 GAGATTCCTGAAAAT--CAGCCTAGTG-----------TCTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3735441 32 - 3785965 GAGACTCCTGAAAAT--CAGCCTAGTG-----------TCTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90327256 32 - 90373283 GAGACTCCTGAAAAT--CAGCCTAGTG-----------TCTGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 127103 32 - 179258 GAGACTCCTGAAAAT--CAGCCTAGTG-----------TCTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5603142 32 - 5823884 GAGACTCCTGGAAAT--CAGCCTAGTG-----------TCTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83921 32 + 372756 GAGACTCCTGAAAAT--CAGCCTGATG-----------TCTGGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16319047 32 + 16356641 GAGACTCCTGAAAAT--CAGCCTGATG-----------CCTGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187966 32 + 1231380 GAGACTCCTGAAAAT--CAGCCTGACA-----------CCCGGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2719522 32 + 11732439 GAGACTCCTGAAAAT--CAGCCTGATG-----------TCTGGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56904956 32 + 57149010 GACACCCCTGAAAAT--CAGCCTTGTG-----------TCTGGGG i micMur3.chr18 C 0 I 13 s proCoq1.NW_012150197v1 1895600 31 - 2029793 GGCACCCCTGAAAAT--CAGCC-TGTG-----------TCTGGGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22883144 31 + 22939663 GACGCACCTGAAAAT--CAGCCTCATG-----------TCTGGG- i otoGar3.GL873542 I 205 C 0 s mm10.chr2 181826646 30 + 182113224 GAGGCCCTGAAAAAT--CGGCCACTTA-----------CTTGG-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47638772 45 + 47698779 GCTGCCCCTGGAAGTTCCACATTAGTGCACCTCACACATCTAGGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 307024 21 - 397369 ---GCCCATGAAAGC--CAGCCCGGA------------------- i dasNov3.JH569290 C 0 C 0 a score=87422.000000 s hg38.chr20_KI270870v1_alt 149689 12 + 183433 GCAGCTG--GCGCT s panTro5.chr20 66485111 12 + 66533130 GCAGCTG--GCGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62152586 12 + 62195757 GCAGCTG--GCGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538858 12 - 578057 GCAGCTG--GCGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110060432 12 - 110113093 GCAGCTG--GCGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92798013 14 - 92844088 GCAGCTGGCGCGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96463540 14 + 96509753 GCAGCTGGCGCGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16934474 14 - 16982598 GCAGCTGGCGCGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3735473 14 - 3785965 GCAGCTGGCGCGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90327288 14 - 90373283 GCAGCTGGCGCGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 127135 14 - 179258 GCAGCTGGCGCGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5603174 14 - 5823884 GCAGCTGGCGCGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83953 14 + 372756 GCAGCTGGTGCACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16319079 14 + 16356641 GCAGCCGGCACACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1187998 13 + 1231380 ACAGCTTGCGCAC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2719554 14 + 11732439 GCAGCTGGCGCACT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1895631 11 - 2029793 -CGGCTGCGGCC-- i proCoq1.NW_012150197v1 C 0 I 2 s otoGar3.GL873542 22883175 12 + 22939663 ACCGCAGGTACC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181826676 14 + 182113224 GCAGCAGATGCCTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47638817 12 + 47698779 GTAGCTGGCACC-- i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 307045 12 - 397369 -GGGGCGGTGCCC- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56904988 13 + 57149010 I a score=15525374.000000 s hg38.chr20_KI270870v1_alt 149701 924 + 183433 GAGGCTGTGCAGATGTGTATGGCCTTGGGTCACAGCTCCCTACTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGAT-CCACGTCT-A--------GGGACC-----------ACTCTGGCTTCTGTGCATCCACCCAGGCCCCCGACCCATCACTGCCACATTCTCCGGGTCATGGCCGAGCTTGACCTCTGCATCCATGGTGACGGAGGTGGC--AATGACATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACAAAGGTTTCACTTC-TTT-TAGATCCATCCAATATGCGAAA-------------AAAGGGTACATTTTAATTTAATGTGTTAAAAACACAATGTCCCTACCGTGTAAATAGAATCCAAGTCAATTGTGACTGCAATTCCAAGTTAGTATTTAAAAATAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAGCCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGGAAAAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATATAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTTTGTTTT-CCCTTGGTCTAATGGAGAG-AAAGACATTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTCAGGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CGTGTTTCTCGTGTC s panTro5.chr20 66485123 924 + 66533130 GAGGCTGTGCAGATGTGTATGGCCTTGGGTCACAGCTCCCTACTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGAGAT-CCATGTCT-A--------GGGACC-----------ACTCTGGCTTCTGTGCATCCACCCAGGCCCCCGACCCATCACTGCCACATTCTCCGGGTCATGGTCGAGCTTGACCTCTGCATCCATGGTGACGGAGGTGGC--AATGACATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACAAAGGTTTCACTTC-TTT-TAGATCCATCCAATATGTGAAA-------------AAAGGGTACATTTTAATTTAATGTGTTAAAAACACAATGTCCCTACCGTGTAAATAGAATCCAAGTCAATTGTGACTGCAATTCCAAGTTAGTATTTAAAAATAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAGCCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGGAAAAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATATAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTTTGTTTT-CCCTTGGTCTAATGGAGAG-AAAGACATTTTGGTTTTCTTTTTCCATTTTGGGATCCTTTTGTTTCAGGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CGTGTTTCTCGTGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62152598 924 + 62195757 GAGGCTGTGCAGATGTGTATGGCCTTGGGTCACAGCTCCCTACTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGAT-CCACGTCT-A--------GGGACC-----------ACTCTGGCTTCTGTGCATCCACCCAGGCCCCCGACCCATCACTGCCACATTCTCCGGGTCATGGTCGAGCTTGACCTCTGCATCCATGGTGACGGAGGTGGC--AATGACATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACAAAGGTTTCACTTC-TTT-TAGATCCATCCAATATGCGAAA-------------AAAGGGTACATTTTAATTTAATGTGTTAAAAACACAATGTCCCTACCGTGTAAATAGAATCCAAGTCAATTGTGACTGCAATTCCAAGTTAGTATTTAAAAATAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAGCCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGGAAAAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATATAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTCATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTTTGTTTT-CCCTTGGTCTAATGGAGAG-AAAGACATTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTCAGGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CGTGTTTCTCGTGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 538870 925 - 578057 GAGGCTGTGCAGATGTGTATGGCCTTGGGTCACAGCTCCCTGCTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGAT-CCACGTCT-A--------GGGACC-----------ACTCTGGCTTCTGTGCATCCACCCAGGCCCCCGACACATCACTGCCACATTCTCCGGGTCATGGCTGAGCTTGACCTCTGCATCCATGGTGACGGAGGTGGC--AATGACATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACAAAGGTTTCACTTC-TTT-TAGATCCATCCAATATGCGAAA-------------AAAGGGTACATTTTAATTTAATGTGTTAAAAACACAATGTCCCTACCGTGTAAATAGAATCCAAGTCAATCGTGACTGCAATTCCAAGTTAGTATTTAAAAATAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAGCCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGGAAAAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATATAGGCCAC------------AA-AAAATCTTGATAT-AACTCTTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTTTGTTTT-CCCTTGGTCTAATGGAGAGAAAAGACATTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTCAGGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CGTGTTTCTCGTGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110060444 922 - 110113093 GAGGCTGTGCAGATGTGTATGGCCTTGGGTCACAGCTCCCTACTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGAT-CCACGTCC-A--------GGGACC-----------ACTCTGGCTTCTGTGCATCCACCCAGGCCCCCGACCCATCACTGCCACATTATCCGGGTCATGGCCGAGCTTGACCTCTGCATCCATGGTGACGGAGGTGGC--AATGACATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCAC-AAGGTTTCACTTC-TTT-TAGATCCATCCAATATGCGAAA-------------AAAGGGTACATTTTAATTTAATGTGTTAAAAACACAATGTCCCTACTGTGTAAATAG-ATCCAAGTCAATGATGACTGCAATTCCAAGTTAGTATTTAAAAATAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAGCCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCGTAAGAGGGGAAAAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATATAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTGTGATAATTTGGGGATTTTGTTTT-CCCTTGGTCTAATGGAGAG-AAAGACATTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTCAGGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CGTGTTTCTCGTGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92798027 916 - 92844088 GAGGCTCTGGAGATGTGTGTGGCCCTGGGTCACAGCTCCCTGTTGGGGCTGCAGCCTTT-AGACCC------TGTGTCTGGGAT-CCACATCC-A--------GGGACC-----------GCTCTGGCTTCTGTGCATCCACCCGGACCCCTGACCCATCACTGCCACATTATCCGGGTCGTGGCCAAGCTTGACCTCTGCATCCATGGCGACGGAGGTGGC--AATGGCATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATCCAGTATGCGAAA-------------AAAGGGTACATTTTAATTTAGTGTGTTAAAAACACAATGTTCCTACTGTGTAAATAGAATCCAAGTCAGTTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGAT----GTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGG--AAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATGTAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTT--TTTT-CCCTTGGTCCAGTGGAGAG-AAAGATGTTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTCAAGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CATGTTTCTCGTGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96463554 916 + 96509753 GAGGCTCTGGAGATGTGTGTGGCCCTGGGTCACAGCTCCCTGTTGGGGCTGCAGCCTTT-AGACCC------TGTGTCTGGGAT-CCACGTCC-A--------GGGACC-----------GCTCTGGCTTCTGTGCATCCACCCGGACCCCTGACCCATCACTGCCACATTATCCGGGTCGTGGCCAAGCTTGACCTCTGCATCCATGGCGACGGAGGTGGC--AATGGCATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATCCAGTATGCGAAA-------------AAAGGGTACATTTTAATTTAGTGTGTTAAAAACACAATGTTCCTACTGTGTAAATAGAATCCAAGTCAGTTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGAT----GTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGG--AAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATGTAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTT--TTTT-CCCTTGGTCCAGTGGAGAG-AAAGATgttttggttttctttttccattttgggttccttttgtttCAAGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CATGTTTCTCGTGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16934488 916 - 16982598 GAGGCTCTGGAGATGTGTGTGGCCCTGGGTCACAGCTCCCTGTTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGAT-CCACGTCC-A--------GGGACC-----------GCTCTGGCTTCTGTGCATCCACCCGGACCCCTGACCCATCACTGCCACATTATCCGGGTCGTGGCCAAGCTTGACCTCTGCATCCATGGCGACGGAGGTGGC--AATGGCATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATCCAGTATGCGAAA-------------AAAGGGTACATTTTAATTTAGTGTGTTAAAAACACAATGTTCCTACTGTGTAAATAGAATCCAAGTCAGTTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGAT----GTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGG--AAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATGTAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTT--TTTT-CCCTTGGTCCAGTGGAGAG-AAAGATGTTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTCAAGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CATGTTTCTCGTGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3735487 916 - 3785965 GAGGCTCTGGAGATGTGTGTGGCCCTGGGTCACAGCTCCCTGTTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGAT-CCACGTCC-A--------GGGACC-----------GCTCTGGCTTCTGTGCATCCACCCGGACCCCTGACCCATCACTGCCACATTATCCGGGTCGTGGCCAAGCTTGACCTCTGCATCCATGGCGACGGAGGTGGC--AATGGCATCGTCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATCCAGTATGCGAAA-------------AAAGGGTACATTTTAATTTAATGTGTTAAAAACACAATGTTCCTACTGTGTAAATAGAATCCAAGTCAGTTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGAT----GTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGG--AAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATGTAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTT--TTTT-CCCTTGGTCCAGTGGAGAG-AAAGATGTTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTCAAGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CATGTTTCTCGTGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90327302 915 - 90373283 GAGGCTCTGGAGATGTGTGTGGCCCT-GGTCACAGCTCCCTGTTGGGGCTGCAGCCTTT-AGACCC------TAGGTCTGGGAT-CCACGTCC-A--------GGGACC-----------GCTCTGGCTTCTGTGCATCCACCCGGACCCCTGACCCATCACTGCCACATGATCCGGGTCGTGGCCAAGCTTGACCTCTGCATCCATGGCGACGGAGGTGGC--AATGGCATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATCCAGTATGTGAAA-------------AAAGGGTACATTTTAATTTAATGTGTTAAAAACACAATGTTCCTACTGTGTAAATAGAATCCAAGTCAGTTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGAT----GTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGG--AAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATGTAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTT--TTTT-CCCTTGGTCCAGTGGAGAG-AAAGACGTTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTTAAGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CATGTTTCTCGTGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 127149 916 - 179258 GAGGCTCTGGAGATGTGTGTGGCCCTGGGTCACAGCTCCCTGTTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGAT-CCACGTCC-A--------GGGACC-----------GCTCTGGCTTCTGTGCATCCACCCGGACCCCTGACCCATCACTGCCACATTATCCGGGTCGTGGCCAAGCTTGACCTCTGCATCCATGGCGACGGAGGTGGC--AATGGCATCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATCCAGTATGCGAAA-------------AAAGGGTACATTTTAATTTAATGTGTTAAAAACACAATGTTCCTACTGTGTAAATAGCATCCAAGTCAGTTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAAAAATTA-AAGAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGAT----GTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGGCACCCTAAGAGGGG--AAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATGTAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTTAAAAAGTATTTTGTAACTGAGGCATTTTGATAATTTGGGGATTT--TTTT-CCCTTGGTCCAGTGGAGAG-AAAGATGTTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTCAAGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CATGTTTCTCGTGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5603188 918 - 5823884 GAGGCTGTGGAGATGTGTGTGGCCCTGGGTCACAGCTCCCTGTTTGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGAT-CCACGTCCAA--------GGGACC-----------GCTCTGGATTCTGTGCATCCACCCGGACCCCTGACCCATCACTGCCACATTATCCGGGGCGTGGCCAAGCGTGACCTCTGCATCCATGGCGACGGAGGTGGC--AATGACCTCATCAAGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATCCAGTATGCGAAA-------------AAAGGGTACATTTTAATTTAATGTGTTAAAAACACAATGTTCCTACTGTGTAAATAGAATCCAAGTCAATTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGAT----GTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCACACCAGGACACCCTAAGAGGGG--AAAAGTGAATTCAAAGCAAAAATAACTATTTGACTATAATGTAGCCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTAAAAAACTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTT--TTTTCCCCTTGGTCCAGTGGAGAG-AAAGACATTTTGGTTTTCTTTTTCCATTTTGGGTTCCTTTTGTTTCAAGCACGGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTTGGG-CATGTTTCTCGTGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 83967 922 + 372756 GAGGCTGTGCAGGTGTGTGTGGCCTTGGGTCACAGCT-CCTACTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGCT-CCAAGTCC-A--------GGGATG-----------ACTCTGGCTTCTGTGCGTCCACCCAGGCCCCTGACCTATCACTGCCACATTATCCGGGCCGTGGCCAAGCTTGACCTCTGCATCCATGGTGATGGAGGTGGG--GATGACATCATCAGGGTCAGAGGGTAAATTCCTAA-CAGGAGACCACCAAGGTTTCACTCC-TTT-TAGATCCATTCAATATGTGAAA-------------AAAGGGTAAATTTTAATTTAATGTGTTAAAAACACAATATTGTTACTCTGTAAATAGAATCCAAGTCAATTGTGACTGCTATTCCAAGTTAGTATTTAAAAGTAGAGAGACTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAACCTCTTATGTTACCGTTTGCtatttatttaacatttttatttattaattttataCTATTTCAACTAGACCCCATACCAGGACACCATAAGAGGGGAAAAAAGTGAATTCAAAGCAAAAATAACTATTTGACTGTAATATAGGCCAC------------AACAAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGAGGCAACCAAGttattttttatatattttgttatttattcttttaataatggaattttttaaaaaaGTATTTTGTAACTGAGTAATTTTGATAATTTGGGGATTT--TTTT-TCCTCAGTCCAATGGAGAG-AAAGACATTTTTGTTTTCTTTTTCCCTTTTGGGTTCCTTTTGTTTCAGGCACAGATAACAGCCAGTGGAATTCTGTATTTATGA-TTATTTAAGTGTAGCGCAGAT-GTGTATGCTTGGG-CGTGTTTCTCATGTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16319093 922 + 16356641 GAGGCTGTGCAGATGTGTGTGGCCTTGGGTCACAGCTCCCTCTTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGCTCCCAAGTCC-A--------GGGACC-----------ACTCTGGCTTCTGTGCGTCCACCCAGGCCCCTGACCTATCTCTGCCATGTTATCCGGGCCGTGGCCAAGCTTGACCTCTGCATCCATGGTGACGGAGGCGGGGAGATGACATCACCAGGGTCAGAGGGTAAATTGCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATTCAATATGTGGAA-------------AAAGGGTAAATTTTAATTTAATGTGTTAAAAACACAATGTTCTTACTGTGTAAATAGAATCCAAGTCCATTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAGATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttataCTATTTCTGCTAGACCCCACACCAGGACACCATCAGAGGGG-AAAAAGTGAATTCAAAGCAAAAATAACTATTCGACTGTAATATAGGCCAC------------AAAAAAATCTTGGTAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGttattttttatatattttgttatttattcttttaataaGGGAATTTTTTAAAAAAGTATTTTGTAACTGAGTAATTTTGATAATTTGGGGGTTT--TTTT-CCCTCGGTCCAATGGAGAG-AAAGACATTTCTGTTTTCTTTTTCCCTTTTGGGTTCCTTTTGTTTCAGGCACAGATAACAGCAAGTGGAATTCTGTATTTATGA-TTATTC-AGTGTAGCGCAGAT-GTGTGTGCTCGGG-CGTGTT--TCGTGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1188011 914 + 1231380 -------TGCACATGTGTGTGGCCCTGGGTCACAGCTCCCT--TGGGGCTGCAGCCTTT-AGACCC------TGGGCCTGGGCTCCCAAGTCC-A--------GGGACC-----------ACTCTGGCTTCTGTGCATCCACCCAGGCCCCTGACCCATCTCTGCCACGTTATCCGGGCCGTGGCCAAGCTTGACCTCTGCATCCATGGTGACGGAGGTGGGGAGATGACATCATCAGGGTCAGAGGGTAAATTGCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATTCAATATGTGAAA-------------AAAGGGTAAATTTTAATTTAATGTGTTAAAAACACAATGTTCTTACTGTGTAAATAGAATCCAAGTCAATTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAGATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCGCACCAGGACACCATAAGAGGGGGAAGAAGTGAATTCAAAGCAAAAGTAACTATTTGACTGTAATATAGGCCAC------------AAAAAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTAAAAAAGTATTTTGTAACTGAGTAATTTTGATAATTTGGGGATTT--TTTT-TCCTCGGTCCAATGGAGAG-AAAGACATTTTTGTTTTC-TTTTCCTTTTTGGGTTCCTTTTGTTTCAGGCACAGATAACAGCAAGTGGAATTCTGTATTTATGA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTCGGG-CGTGTT--TTGTGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2719568 902 + 11732439 GAGGCTGTGCAGATGTGTGTGGCCTCGGGTCACAGCTCCCTACTGGGGCTGCAGCCTTT-AGACCC------TGGGTCTGGGCT-CCAAGTCC-A--------GGGACC-----------ACTCTGGCTTCTGTGCGTCCACCCAGGCCCGTGACCTATCACCGCCACGTTATCCGGGCCGTGGCCAAGCTTGACCTCTGCATCAATGGTGACGGAGGTGGG--GATGGCATCATCAGGGTCAGAGGGTAAACTGCTAA-CAGGAGACCACCAAGGTTTCACTTC-TTT-TAGATCCATTCAATATGTGAAA-------------AAAGGGTAAATTTTAATTTAATGTGTTAAAAACACAATGTTCTTACTGTGTAAATAGAATCCAAGTCAATTGTGACTGCAATTCCAAGTTAGTATTTAAAAGTAGAGAGATTGCACTTCCTGGAAAAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAACTAGACCCCGCACCAGGACACCATAAGAGGGGAAAAAAGTGAATTCAAAGCAAAAATAACTATTTGACTGTAATATAGGCCAC------------AA-AAAATCTTGATAT-AACTCCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAATTTTTTAAAGAAGTATTTTGTAACTGAGTAATTTTGATAATTTGGGGATTT--TTGT-TCCTCGGTCCAATGGAGAG-AAAGACATTTTTGTTTTCTTTTTCCCTTTTGGGTTCCTTTTGTTTCAGGCACAGATAGCAGCAAGTGGAATTCCGTATTTATGA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGC--------------------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56905001 926 + 57149010 GAGCCTGTGCAGACACGTGTGTCTTGGGGTCATGGCTCCCTCTGGGAGCTGTAGCCTCT-AGACCA------CGGGTCTGGGCT-CCAAGCCC-A--------GGGACCACCAGGCCAGGCCTCTGGCTTCTGTGTGTCCACCCAGGCCCCTGGCCTGTCACTGCCACATTTCCTGGGTCCTGTCTG-GCTTGGTCTTTGTGTCCCAGGT----GAGGTGGG--GATGACATCATT-AGGTTGG-GGGTAAATTCCTAA-CAGGAGGCCACCAAGGTTTCACTTC-TTT-TAGATCCATTTGAGATGTG-AA-------------AAAAGGTGAATTTTAATTTAATGTGTTAAAAACACAATGTTCCTACTGTGTAAATAGAGTCCAAGTCAATGGTGACTGCAATTCAGAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCTTGGAAGAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAACCTCTTATGTTAACGTTTGCtatttatttaacatttttatttattaattttatactatttCAAATAGATCCCACACTAGGGCACCATAAGAGGGA-AAAAAGTGAAATCAAAGCAAAG-TAACTATTTGACTATAATATAGGCCAC----------AAAA-AAAATCTTGATAT-AACTTCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAA-TTTTTAAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATTTTTTTTC-CCCTTAGTCTGGTGGAGAG-AAAGACTTTTTGGTTTTCTTTTTCCCTTTTGGGTTCCTTTTGTTTCAGGCAGAGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGCGTAGCGCAGAT-GTGCGTGCTCTGG-CGTGTTTCTCGTGTC i micMur3.chr18 I 13 I 31 s proCoq1.NW_012150197v1 1895644 931 - 2029793 GAGCCTGTGCAGACATGTGGGTCTTTGGGTCACGGCTCCCTCTGGGGGCTGCAGCCTTT-GGACCC------CGGGTCTGGGCT-CCGACCTC-A--------GGGACC-CCAGGCCAGGCCTCTGGGCTCTCTGTGTCCACCCAGGCTGCTGGCCTGTCACCGCCACATTTCCTGGGTCACGTCTG-GCTTGATCTCTGTGTCCGAGGTGACAGAGGTGGG--GATGACATCATTAAGGTCGG-GGGTACATTCCTAA-CAGGAGGCCACCAAGGTTTTACTTCTTTT-TAGATCCATTCAAGATGTGAAA-------------AAAAGGTGAATTTTAATTTAATGTGTTAAAAACACAATGTCCCTACTGTGTAAATAGAGTCCAAGTCAATCGTGACTGCAATTCAGAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAGAAATTA-AAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACGACCTCTTATGTTAATGTTTGCtatttatttaacatttttatttattaattttatactatttCAAATAGATCCCACACCAGGGCACCATAAGAGGGA-AAAAA-TGAAATCAAAGCAAAA-TAACTATTTGACTATAATATAGGCCAC----------AAAA-AAAATCTTGATAT-AACTTCTAG--------------TTATAATTTTGATGCAACCAAGTTATTTTTTATATATTTTGTTATTTATTCTTTTAATAATGGAA-TTTTTAAAAAAGTATTTTGTAACTGAGGAATTTTGATAATTTGGGGATCTTTTTTC-CCCTTAGTCTGGTGGAGAG-AAAGACATTTTGGTTTTCTTTTTCCCTTTTGGGTTCCTTTTGTTTCAGGCACAGATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGCGTAGCGCAGAt-gtgtgtgctctgg-cgtgtttctcgtgtc i proCoq1.NW_012150197v1 I 2 C 0 s otoGar3.GL873542 22883187 910 + 22939663 CTACCTGTGCAGACATGTGTGGCCTTGGGTCACAGCCCCCTCTAGGGGCTGCAACCTTTCAGACCC------AGAGTCTAGGCT-CTAAGCCC-A--------GGGACCAGCAGGCTGGGCCTCTGGCTTCTATGTGTTCACCCAGGCCCTTGGCCAGTCACTGCCACGTATCCTGGGTTGTGGCTG-GCTTAATCTTTGTGTCTGGGGTGACGGAGGCAGG--GATGACATCATTGAGGTCAG-GGGTAAAGTCTTAA-CTGGAGGATACCAAGGTTTCACTTCTTTT-TAGATCCATTCAAGATGTG-AA-------------AAAAGGTGAATTTTAATTTAATGTGTTAAAAACACAATGTT-CTACTGTGTAAATAGAGTCCAAGTCAATTGTGACTGCAATTCAAAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAA-AACTTA-AAGAGTAGTTAGT----TTATTCTGTAAATTATTTAATTTTGTCAA-ATGTAAGTATTTAT----ACAACCTCTTATGTTAACATTTGCtatttatttaacatttttatttattaattttatactattttaaatGGATCCCACACCAGGGCACAATAAGAGGGA-AAAAAGTGAAATCAAAGTAAAA-TAACTATTTGACTATAATATAGGCCAC-------------A-AAAATATTGTTAT-AACTTCTAG--------------TTATAATTTTGATG----CAAGttattttttatatattttgttatttattcttttaataGCGAAA-TTTTTAAAAAAGTATTTTGTAACTGAAGAATTTTGATAATTTGGGA----TTTTTC-TTCTTAGTCTGATGGAGAG-AAAGACATTTTGTTTTTCTTTTTCCCTTTTGGGTT-CTTTTGTTTCAAGCCCAGGTAAAAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGCGCAGAT-GTGTGTGCTCTGG-CGTGTTTCTTGTGTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181826690 871 + 182113224 TAAGCTGTGCAGAT------------------CTGCTTTCTCCT--GGCTCCAGTTTTT-A-ACCC------CTGGCTTGGGCT-CTAAGTCC-A---------AGACCACTGGGCCAAACCTCTGGTTTCCGTACCTCCATCCAGGTGCTGGACCCATCATTGTATCTTTTCCTGCAT-------AGGTTTGCTCCTTGTATCCAAGGTGACTGCAGTGGG--GCAGG--------AGACCAG-TGGTAAATTGTTAC-AGGGAGACCACCAAGATTTCACTTC-TTTATAGGTTCATTTAAGATGTG--A-------------AAAGGATAAATTTTAATTTAATGTGTTAAAAACACAATGTTCTTACTGTGTAAATAGAGTCCAAGTCAATTGTGACTGCAATTCCAAATTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAGACACTG-AA-AGTAGTTAGT----TTATTCTGTAAATTATTTAATTTTGTCA-----TAAGTATTTATATTCTTACCCTCTTATGTTAATGTTTGCtatttatt----atttttatttatttattttataCTATATCAACTAGATGACACACTAGGGCACCATAAGAGTTA-AATAAGTTAAATTGAAACAAAAACATTTATTTGACTATAAGATAGGCCAC------------AA-AGAATCTTGATAT-AACTTCTAG--------------TTATAATTTTGATGCAACCGAGttattttttatatattttgttatttattcttttaataatggaattttttaaaaaaGTATTTTGTAACTGAAGAATTTTGATAATTTGGGTTTTT--CTCC-CCATTGGTCCACCAGAGAG-AAAGGTGTTT-GGTTTTCTTTTTCC-CTTTGGGTTCCTTTTG--TCAGGCC--AATAACAGCAAATGGAATTCTGTATTTATTA-TTATTTAAGTGTAGTGCAGAT-GTGTGTGCTCTGG---TGTTTCTTGTGTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47638831 916 + 47698779 AAGCCTGCAGAGACTTGTACAGCTTGGGGTCACGCCCCCTCTTCGGGGCTGCGGCCGTC-AGATCC-------AGGTCTGGG---TCAGGGCC-A--------GGG--------------TCTCTGGC-TCTCTGCGTCCACCCCTGCCCATGACCCGTTACTGCCACATTACCCGGGTCACGGCCGAGCTTGACT------------------GAGGTGGC--GATGGTGTCAGCAAGGTCAGGGGATAAATTCCTAATTCGGAGACCACCAAGA-TTCACTTCTTTT-TAGATCCATTCAAGATACGAAA-------------AAAG---AAATTTTAATAGAAAGTGTT--AAACACAATGTTCCTAACATGTAAATAGAGTCCAAATCGATTGTGACTACAATTCCAAGTTAGTATTTAAACGTAGAGAAATTGCACTTCCTGAAAGAGATAA-AAGAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAACCTCTTATGTTAACATTTGCtatttatttaacatttttatttattaattttGTACTATTTCAGCTAGACCCCACACCAGGACACCATGAGAGGTA-AATCAATGAAATCAAAGCAAAATTAACTATTGGACTATGAGATAGGCCACAAAAAAAAAAAAAA-AAAATCTTGCTGT-GACTTCTATATGTAGAAGTCTTCTTATAATTTTGATGCAACCAAGttattttttatatattttgttatttattcttttaataatggaa-tttttaaaaaaGTATTTTGTAACTGAGGACTTTTGATAATTTAGGGATAT--TTTT-CCCTTGGTCCAATGGAAAG-AAAGACTTTTTGGTTTTCTTTACCCCTTT--GGTTCCTTTTGTTTCAGGCACGGACAACAGCAAATGGAATTCTGTATTTATTATTTATTTAAGTGTAGCGCAGAT-GTGTGTGCTCTGG-CGTGTTTCTCGTGTT i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 307057 891 - 397369 GAGGCTGTGCGG---------CCCCCGGGGCCTCTCTGCCT-CTGCTGCTGCGGCTTGC-AGACTCCACTTCTGGCTCTGAGGC-CCGAGACC-ACCAGGCCTGGGGCC-----------TCCTGGTTTCCTGTGTGCCCACAGATTCCCAGGAAACA------------------------------GTGTGGGCTCGACAGCCGTGACGGGGTGGGCCGC--GCTGGCACCATCAGGGAC------TAGATTCCTAG-T-GGGGGCCACAAAGACTTCGCTTCCTCT-AAGATCCGTTCAAGATGCtaaataaataaataaataaaAGGTAAACTTTAAT-----GTGTTAAAAACACAGCATTCCTAA-ATGTAAATAGAGTCCAGATCGATGGTGACTGCAATTCTGAGTTAGTATTTAAAAGTAGAGAAATTGCACTTCCTGGAAGAAAGAAGAAAAGTAGTTAGTTTAATTATTCTGTAAATTATTTAATTTTGTCAAGATGTAAGTATTTATATTCACAGCCTCTTATGTTAACATTTGCtatttatttaacatttttatttattaatttCATACTATTCCAACTCGACCCCACGCCAAGGCACCATGAGAGGGA-AATAAATGAAATAAAAGCAAAAATAACTGTGTAATTATAAGGTAGGCCAT-----------GAA-AAAATCATGATATAAACTTCTAG--------------TTATAATTTTGATGCAACCAAGttattttttatatattttgttatttattcttttaataatggaa-tttttaaaaaagtattttataaCTGAGGAGTTTTGATAGTTTGGG----T--TTTT-CCCTTGGTACAATGGAGAG-AGAGTC--TTTCGTTTTCTTTTCCC-TTTTGGGTTCCTTTGGCTTCAGGCCCTGGTAGTGGTAAATGGCGTCCTGTCTTATTTATTTACTC---TGTAATGCAGATGGCGTGTGCTCTGGCCGTGTTGCTTGTGTC i dasNov3.JH569290 C 0 C 0 a score=438146.000000 s hg38.chr20_KI270870v1_alt 150625 35 + 183433 GCGTTTGCGTGTCGGCTC--TTG-CGGTGGAGTCCTGT s panTro5.chr20 66486047 35 + 66533130 GCGTTTGCGTGTCGGCTC--TTG-CGGTGGAGTCCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153522 35 + 62195757 GCGTTTGCGTGTCGGCTC--TTG-CGGTGGAGTCCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 539795 35 - 578057 GCGTTTGCGTGTCGGCTC--TTG-CGGTGGAGTCCTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061366 35 - 110113093 GCGTTTGCGTGTCGGCTC--TTG-CGGTGGAGTCCTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92798943 35 - 92844088 GCGTTTGCGTGTCGGCCC--TTG-CGGTGGAGTCCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96464470 35 + 96509753 GCGTTTGCGTGTCGGCCC--TTG-CGGTGGAGTCCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16935404 35 - 16982598 GCGTTTGCGTGTCGGCCC--TTG-CGGTGGAGTCCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3736403 35 - 3785965 GCGTTTGCGTGTCGGCCC--TTG-CGGTGGAGTCCTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90328217 35 - 90373283 GCGTTTGCGTGTCGGCCC--TTG-CGGTGGAGTCCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 128065 35 - 179258 GCGTTTGCGTGTCGGCCC--TTG-CGGTGGAGTCCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604106 35 - 5823884 GCGTTTGCGTGTCGGCCC--TTG-CGGTGGAGTCCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 84889 34 + 372756 GTGTTTGTGTGTCCGCTC--TCG-CGACGGAGCCTTG- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320015 34 + 16356641 GCGTTTGTGTGTCGGCTC--TTG-CGATGGAGTCCTG- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1188925 34 + 1231380 GCGTTTGTGTGTCGGCTC--TTG-CGATGGAGTCCTG- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720470 31 + 11732439 ---TTTGTGTGTCGGCTC--CCG-CGACGGAGCCCCG- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1896575 34 - 2029793 -tgtgtgtgtgtTGGCTC--TCG-CGGCTGAGCCCTGT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22884097 34 + 22939663 -CGTTTGTGTGTTGTCTC--TTA-TGGCTGAGTCTTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181827561 33 + 182113224 GCATTTGTGGA--GGTTC--TCA-TGGATGATTCATGT i mm10.chr2 C 0 C 0 s canFam3.chr24 47639747 36 + 47698779 GCGTCTGTGTGCTGGTTC--TTGATGGCTGAGTCACGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 307948 35 - 397369 --ATGTCTGTGTTGGTCCTGTGG-TGGCTGAGTCGTGT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56905927 31 + 57149010 I a score=386263.000000 s hg38.chr20_KI270870v1_alt 150660 27 + 183433 TGCTGTGAGGGAGTGCTGGCCGCAGGC s panTro5.chr20 66486082 27 + 66533130 TGCTGTGAGGGAGTGCTGGCCGCAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153557 27 + 62195757 TGCTGTGAGGGAGTGCTGGCCGCAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 539830 27 - 578057 TGCTGTGAGGGAGTGCTGGCCGCAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061401 27 - 110113093 TGCTGTGAGGGAGTGCTGGCCGCAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92798978 27 - 92844088 TGCTGTGAGGGGGTGCCGGCCGCAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96464505 27 + 96509753 TGCTGTGAGGGGGTGCCGGCCGCAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16935439 27 - 16982598 TGCTGTGAGGGGGTGCCGGCCGCAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3736438 27 - 3785965 TGCTGTGAGGGGGTGCCGGCCGCAGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90328252 27 - 90373283 TGCTGTGAGGGGGTGCCGGCCGCAGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 128100 27 - 179258 TGCTGTGAGGGGGTGCCGGCCGCAGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604141 27 - 5823884 TGCTGTGAGGGGGTGCCGGCCGCAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 84923 21 + 372756 TGC--TGAGGGAGTGCTGGCCGC---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320049 25 + 16356641 TGC--TGAGGGAGTGCTGGCCGCAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1188959 25 + 1231380 CGC--TGAGGGGGTGCTGGCCGCGGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720501 25 + 11732439 TGC--TGGGGGAGTGCTGGCCACAGGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56905958 26 + 57149010 TCCTGTGAGGGAGT-CTGGCCGCAGGC i micMur3.chr18 I 31 I 34 s proCoq1.NW_012150197v1 1896609 26 - 2029793 CGCTGTGAGGGAGT-CTGGCCGCGGTC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22884131 26 + 22939663 TGCTGTGAGGGGTT-CTGGCTGCAGTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181827594 27 + 182113224 TGCTGTGAGGGAGTGCTGGCCATGGTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47639783 27 + 47698779 TGCTGTGAAGGAGTGCTAGCCACAGGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 307983 20 - 397369 TTCTGTGAAGGAATACTGTC------- i dasNov3.JH569290 C 0 C 0 a score=318774.000000 s hg38.chr20_KI270870v1_alt 150687 40 + 183433 AGCCTCGAGTCACCG-CCAGGCTCACAGGCTGTGCCAC---CCG---- s panTro5.chr20 66486109 40 + 66533130 AGCCTCGAGTCACCG-CCGGGCTCACAGGCTGTGCCAC---CCG---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153584 40 + 62195757 AGCCTCGAGTCACCG-CCGGGCTCACAGGCTGTGCCAC---CCG---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 539857 40 - 578057 AGCCTCGAGTCACCG-CCGGGCTCACAGGCTGTGCCAC---CCG---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061428 40 - 110113093 AGCCTCGAGTCGCCG-CCAGGCTCACAGGCTGTGCCAC---CCG---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92799005 40 - 92844088 AGCCTCGAGTCGCCG-CTGGGCTCACAGGCTGTGCCGC---CCA---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96464532 40 + 96509753 AGCCTCGAGTCGCCG-CTGGGCTCACAGGCTGTGCCGC---CCA---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16935466 40 - 16982598 AGCCTCGAGTCGCCG-CTGGGCTCACAGGCTGTGCCGC---CCA---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3736465 40 - 3785965 AGCCTCGAGTCGCCG-CTGGGCTCACAGGCTGTGCCGC---CCA---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90328279 40 - 90373283 AGCCTCGAGTCGCCA-CTGGGCTCACAGGCTGTGCCGC---CCA---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 128127 40 - 179258 AGCCTCGAGTCGCCG-CTGGGCTCACAGGCTGTGCCGC---CCA---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604168 40 - 5823884 AGCCTCGAGTCGCCG-CTGGGCTCACAGGCTGTGCCGC---CCA---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 84944 27 + 372756 -----------------CAGGCTCACAGGCTGTGCCACCAACCC---- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320074 43 + 16356641 AGCCTTGAGCGGCCG-TCAGGCTCACAGGCTGCGCTACCATCCC---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1188984 43 + 1231380 AGCCCTGAGTAGCCG-CCAGGCTCATAGGCTGCGCCACCATCCC---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720526 41 + 11732439 AGCCTT--GTAGCCG-CCAGGCTCACAGGCTGCCCTGCCATCCC---- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1896635 40 - 2029793 AGCATCACGGAGCCGCCCGGACTCACAGGCTGTGCTAC---CA----- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22884157 39 + 22939663 GGCCTCA-GGCACCGCCCGGACTC-CAGGCTGCACTGC---TCA---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181827621 36 + 182113224 AGTTCTAGG----CA-ATGGACTCGCTGGCCAAGCTGC---CCA---- i mm10.chr2 C 0 I 3 s canFam3.chr24 47639810 33 + 47698779 GGCACCGAGCAGTCC-CCA--CTCACAGGCT-CCCTG----------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 308003 26 - 397369 -------------------GATATACAAGCAGTCCCAC---TGCAGCG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56905984 34 + 57149010 I a score=2359065.000000 s hg38.chr20_KI270870v1_alt 150727 128 + 183433 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAGCGCGTTGAACCC-----ACAGCACTCCGTGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAATCGGTGC-TGTG s panTro5.chr20 66486149 128 + 66533130 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCGTGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAATCGGTGC-TGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153624 128 + 62195757 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCGTGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAATCGGTGC-TGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 539897 128 - 578057 TCCCTCTGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCGTGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAATCGGTGC-TGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061468 128 - 110113093 TCCCTCTGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCGTGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAATCGGTGC-TGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92799045 128 - 92844088 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCATGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGTGC-TGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96464572 128 + 96509753 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCATGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGTGC-TGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16935506 128 - 16982598 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCATGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGTGC-TGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3736505 128 - 3785965 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCATGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGTGC-TGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90328319 128 - 90373283 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCATGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGTGC-TGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 128167 128 - 179258 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCATGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGTGC-TGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604208 128 - 5823884 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAATGCGTTGAACCC-----ACAGCACTCCATGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGTGC-TGTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 84971 128 + 372756 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGTGTTGAACCC-----ACAGAACTCCGTGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGCCGGTCC-TGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320117 128 + 16356641 TCCCTCGGACAGCTCCAATACTGTGACCCTCCGTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCGTGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTTGGTCC-TGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1189027 128 + 1231380 TCCCTCCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCGTGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGGCTGTGAGTCGGTCC-TGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720567 128 + 11732439 TCCCTGCGACAGCTCCAATACTGTGACCCTCCTTCCTCAGGAAACGCGTTGAACCC-----ACAGCACTCCGTGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGTCC-TGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56906018 123 + 57149010 TCCCTCTGACAGCTCTGATACTGTGACCCTCCTTCCTCAGGAAACGC-TTGAACCC-----ACAGCA---C-TGGCGTGTCTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGCGC-CGTG i micMur3.chr18 I 34 I 537 s proCoq1.NW_012150197v1 1896675 126 - 2029793 TCCCTCTGACAGCTCGGATACTGTGACCCTCCTTCCTCAGGAAACGC-TTGAACCC-----ACAGCACTTC-TGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGAGTCGGCGC-TGTG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22884196 127 + 22939663 TCCCTCTGACAGCTTTGATACTGTGACCCTCCTTCCTCAGGAAACATGTTGAACCC------CAGCACTTCACGGTGTGTCTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGATGGTGACTCAGTGC-TGTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181827660 118 + 182113224 TCT---TGATA-CCCCAATACTGTGACCCTCCTTCCTCAGGAAACACGTTGGACTC-----ACAGTACCTCGTGGTGTGTTTGGAGGGTGATTT-CTAATAAAAG-----TCTCACTGTGCATAGGTGC-TATG i mm10.chr2 I 3 C 0 s canFam3.chr24 47639843 133 + 47698779 TTCCTCTGACAGCTCCGATACTGTGATCC-CCTTCCTCAGGAAACGCGTGGAACCCACAGCACAGCACTTCTCGGTGTGTTTGCAGGGTGATTTCCTAATAAAAGTCCACTCTGACTGTGCACGGGAGCGTGTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 308029 126 - 397369 TTCAGCGGACGGCTCTGATACTGTGACCCCCCTTCCTCAGGAAGCGTGTT-AACCC-----ACAGCACTTCGAGATGTATTTGCAGGGTGATTTCCTAATAAAATCCACTTCTGATTGTGAGTTGGTGC-TGT- i dasNov3.JH569290 C 0 C 0 a score=183677.000000 s hg38.chr20_KI270870v1_alt 150855 11 + 183433 GTCTGTGGGGA s panTro5.chr20 66486277 11 + 66533130 GTCTGTGGGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153752 11 + 62195757 GTCTGTGGGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540025 11 - 578057 GTCTGTGGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061596 11 - 110113093 GTCTGTGGGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92799173 11 - 92844088 GTCTGTGGGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96464700 11 + 96509753 GTCTGTGGGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16935634 11 - 16982598 GTCTGTGGGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3736633 11 - 3785965 GTCTGTGGGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90328447 11 - 90373283 GTCTGTGGGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 128295 11 - 179258 GTCTGTGGGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604336 11 - 5823884 GTCTGTGGGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85099 11 + 372756 GTCTGTGGGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320245 11 + 16356641 GTCTGTGGGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1189155 11 + 1231380 GTCTGTGGGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720695 11 + 11732439 GTCTGTGGGGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1896801 11 - 2029793 GTCTGTGGGGA i proCoq1.NW_012150197v1 C 0 I 192 s mm10.chr2 181827778 11 + 182113224 GTCTGTGAGGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47639976 11 + 47698779 TGCTGTGGCGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 308155 11 - 397369 GTCTGTGGTGA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56906141 537 + 57149010 I e otoGar3.GL873542 22884323 0 + 22939663 C a score=128262.000000 s hg38.chr20_KI270870v1_alt 150866 12 + 183433 GGACATTGTCTC- s panTro5.chr20 66486288 12 + 66533130 GGACATTGTCTC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153763 12 + 62195757 GGACATTGTCTC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540036 12 - 578057 GGACATTGTCTC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061607 12 - 110113093 GGACACCGTCTC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92799184 12 - 92844088 GGACACTGTCTC- i rheMac8.chr10 C 0 I 1516 s macFas5.chr10 96464711 12 + 96509753 GGACACTGTCTC- i macFas5.chr10 C 0 I 1516 s macNem1.NW_012014244v1 16935645 12 - 16982598 GGACACTGTCTC- i macNem1.NW_012014244v1 C 0 I 643 s cerAty1.NW_012001373v1 3736644 12 - 3785965 GGACACTGTCTC- i cerAty1.NW_012001373v1 C 0 I 1696 s chlSab2.chr2 90328458 12 - 90373283 GGACACTGTCTC- i chlSab2.chr2 C 0 I 304 s manLeu1.NW_012101652v1 128306 12 - 179258 GGACACTGTCTC- i manLeu1.NW_012101652v1 C 0 I 671 s colAng1.NW_012114444v1 5604347 12 - 5823884 GGACACTGTCTC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85110 12 + 372756 GGACATTGTCTC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320256 12 + 16356641 GGACATTGTCTC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1189166 12 + 1231380 GGACGTTGTCTC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720706 12 + 11732439 GGACACCGTCTC- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22884323 5 + 22939663 -------GTCTC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181827789 12 + 182113224 GGCTGCTACTCT- i mm10.chr2 C 0 I 8 s canFam3.chr24 47639987 7 + 47698779 -----CGGTCTC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 308166 13 - 397369 AGACGCTGCTCAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1896812 192 - 2029793 I e micMur3.chr18 56906141 537 + 57149010 I a score=245521.000000 s hg38.chr20_KI270870v1_alt 150878 23 + 183433 CATTCTTGGTGAGCTCTATCATG s panTro5.chr20 66486300 23 + 66533130 CATTCTTGGTGAGCTCTATCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153775 23 + 62195757 CATTCTTGGTGAGCTCTATCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540048 23 - 578057 CATTCTTGGTGAGCTCTATCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061619 23 - 110113093 CATTCTTGGTGAGCTCTATCATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92800712 23 - 92844088 CATTCCTGGTGAGCTCTATCATG i rheMac8.chr10 I 1516 C 0 s macFas5.chr10 96466239 23 + 96509753 CATTCCTGGTGAGCTCTATCATG i macFas5.chr10 I 1516 C 0 s macNem1.NW_012014244v1 16936300 23 - 16982598 CATTCCTGGTGAGCTCTATCATG i macNem1.NW_012014244v1 I 643 C 0 s cerAty1.NW_012001373v1 3738352 23 - 3785965 CATTCCTGGTGAGCTCTATCATG i cerAty1.NW_012001373v1 I 1696 C 0 s chlSab2.chr2 90328774 23 - 90373283 CATTCCTGGTGAGCTCTATCATG i chlSab2.chr2 I 304 C 0 s manLeu1.NW_012101652v1 128989 23 - 179258 CATTCCTGGTGGGCTCTATCATG i manLeu1.NW_012101652v1 I 671 C 0 s colAng1.NW_012114444v1 5604359 23 - 5823884 CATTCCTGGTGGGCTCTATCATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85122 23 + 372756 CGTTCCTGGTCAGCTCTGTTGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320268 23 + 16356641 CGTTCCTGGTCAGCTCCATCGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1189178 23 + 1231380 CGTTCCTGGTCAGCTCTACCGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720718 23 + 11732439 TGTTCCCGGTCAGCTGTATCGTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22884328 23 + 22939663 TATTCCTGACCAGCTTGCTCAAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181827809 20 + 182113224 TGTTTCTGG-GAGTGCTATGA-- i mm10.chr2 I 8 C 0 s canFam3.chr24 47639994 22 + 47698779 TGTCCCTGG-GAGCCCCAACCCG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 308179 23 - 397369 TGTTCCTGGCCAGTTCTAACTTG i dasNov3.JH569290 C 0 I 74 e proCoq1.NW_012150197v1 1896812 192 - 2029793 I e micMur3.chr18 56906141 537 + 57149010 I a score=11623.000000 s hg38.chr20_KI270870v1_alt 150901 2 + 183433 CA s panTro5.chr20 66486323 2 + 66533130 CA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153798 2 + 62195757 CA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540071 2 - 578057 CA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061642 2 - 110113093 CA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92800735 2 - 92844088 CG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466262 2 + 96509753 CG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936323 2 - 16982598 CG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738375 2 - 3785965 CG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90328797 2 - 90373283 CG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129012 2 - 179258 CA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604382 2 - 5823884 CA i colAng1.NW_012114444v1 C 0 I 114 s calJac3.chrUn_GL286459 85145 2 + 372756 CC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320291 2 + 16356641 CA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1189201 2 + 1231380 CA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720741 2 + 11732439 CC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22884351 2 + 22939663 CA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47640016 2 + 47698779 TC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1896812 192 - 2029793 I e mm10.chr2 181827829 0 + 182113224 C e micMur3.chr18 56906141 537 + 57149010 I e dasNov3.JH569290 308202 74 - 397369 I a score=1591704.000000 s hg38.chr20_KI270870v1_alt 150903 169 + 183433 CCCTCCTGGGAGCAC-ATGC--------CCAGGAG-GGGAATCTTCCATCTCTGGTCTCCCCTTGATACCACACGTGGGT-CCCCTCTGGTGTCAGCTTAGCCAGTATCTCCTTTTGAAACTACCCTACCTCACCGCCTCCACG-TGTGTTTCTAGAAGGTGTAAATCATTGTATCTTGCC s panTro5.chr20 66486325 169 + 66533130 CCCTCCTGGGAGCAC-ATGC--------CCAGGAG-GGGAATCTTCCATCTCTGGTCTCCCCTTGATACCACACGTGGCT-CCCCTCTGGTGTCAGCTTAGCCAGTATCTCCATTTGAAACTACCCTACCTCACCGCCTCCATG-TGTGTTTCTAGAAGGTGTAAATCATTGTATCTTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153800 169 + 62195757 CCCTCCTGGGAGCAC-ATGC--------CCAGGAG-GGGAATCTTCCATCTCTGGTCTCCCCTTGATACCACACGTGGCT-CCCCTCTGGTGTCAGCTTAGCCAGTATCTCCTTTTGAAACTACCCTACCTCACCGCCTCCATG-TGTGTTTCTAGAAGGTGTAAATCATTGTATCTTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540073 169 - 578057 CCCTCCTGGGAGCAC-ATGC--------CCAGGAG-GGGAATCTTCCATCTCTGGTCTCCCCTTGATACCACACGTGGGT-CCCCTCTGGTGTCAGCTTAGCCAGTATCTCCTTTTGAAACTACCCTACCTCACCGCCTCTATG-TGTGTTTCTAGAAGGTGTAAATCATTGTATCTTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061644 168 - 110113093 CCCTCCTGGGAGCAC-CTGC--------CCAGGAG-GGGAATCTTCCATCTCTGGTCTCCCCTTGATACCACACGTGGGG-CCCCCCTGGTGTCAGCTTCACCAGTATCTCC-TTTGAAACCACCCTCCCTCACCGCCTCCATG-TGCGTCTCTTGAAGGTCTAAGTCACTGCGTCTTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92800737 169 - 92844088 CCCTCCTGGGAGCGT-GTGG--------GCAGGAG-GGGAGTCATCCATCTCTGGTCTCTCCTTGATACCACACGTGGGG-CCCCCCTTGTGTCAGTTTAGCCAATATCTCCTTTTGAAACTACCCTTGCTTACCGCCTCCATG-TGTGTTTCTAGAAGGTCTAAGTCACTCTATCTTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466264 169 + 96509753 CCCTCCTGGGAGCGT-GTGG--------GCAGGAG-GGGAGTCATCCATCTCTGGTCTCTCCTTGATACCACACGTGGGG-CCCCCCTTGTGTCAGTTTAGCCAATATCTCCTTTTGAAACTACCCTTGCTTACCGCCTCCATG-TGTGTTTCTAGAAGGTCTAAGTCACTCTATCTTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936325 169 - 16982598 CCCTCCTGGGAGCAT-GTGG--------GCAGGAG-GGGAGTCATCCATCTCTGGTCTCTCCTTGATACCACACGTGGGG-CCCCCCTTGTGTCAGTTTAGCCAATATCTCCTTTTGAAACTACCCTTGCTTACTGCCTCCATG-TGTGTTTCTAGAAGGTCTAAGTCACTCTATCTTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738377 169 - 3785965 CCCTCCTGGGAGCGT-GTGG--------GCAGGAG-GGGAGTCATCCATCTCTGGTCTCTCCTTGATACCACACGTGGGG-CCCCCCTTGTGTCAGTTTAGCCAATATCTCCTTTTGAAACTACCCTTGCTTACCGCCTCCATG-TGTGTTTCTAGAAGGTCTAAGTCACTCTATTTTGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90328799 169 - 90373283 CCCTCCTGGGAGCGC-GTGG--------GCAGGAG-GGGAGTCATCCATCTCTGGTCTCTCCTTGATACCACACGTGGGG-CCCCCCTTGTGTCAGTTTAGCCAATATCTCCTTTTGAAACTACCCTCGCTCACCGCCTCCATG-TGTGTTTCTAGAAGGTCTAAGTCACTCTATCTTGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129014 169 - 179258 CCCTCCTGGGAGCGT-GTGG--------GCAGGAG-GGGAGTCATCCATCTCTGGTCTCTCCTTGATACCACACGTGGGG-CCCCCCTTGTGTCAGTTTAGCCAATATCTCCTTTTGAAACTACCCTTGCTTACCGCCTCCATG-TGTGTTTCTAGAAGGTCTAAGTCACTCTATCTTGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604498 169 - 5823884 CCCTCCTGGGAGCGC-GTGG--------GCAGGAG-GGGAGTCATCCATCTCTGGTCTCTCCTTGATACCACACGTGGGG-CCCCCCTTGTGTCAGTTTAGCCAATATCTCCTTTTGAAATTACCCTCCCTCACCGCCTCCATG-TGTGTTTCTAGAAGGTCTAAGTCCCTCTATCTTGCC i colAng1.NW_012114444v1 I 114 C 0 s calJac3.chrUn_GL286459 85147 167 + 372756 CCCTTCTGGGAGTGC-ATGG--------GTAGGAGCGGGACCCTTCCATCTCTGGTCTCTCCTTGGTATCATAAGTGGGG-CCCCCCTGCTGTCAGCTTAGCCAATATCTCCTTTTGAAACCACCCT--CCCCCCGGCT-TATG-AGCATTTCTAGAAGATCTAAGTCACTCTGTCTTGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320293 167 + 16356641 TCCTTCTGGGAGCGC-GTGG--------GTAGGAGGGGGACTCTTCCGTCTCTGGTCTCTCCTTGGTACCATGCGTGGGG-CCCCCCTGCTGTCAGCTTAGCCAATATCTCC-TTTGAAACTACCCT--CCCCCCGGCT-TATGTTGCATTTCTAGAAGGTCTAAGTCACTCTGTCTTGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1189203 166 + 1231380 CACTGCTGGGAGCGC-ATGG--------GTGGGAGGGGGACTCTTCCGTCTCTGGTCTCTCCTTGGTACCATGCGTGGGG-CCCCCCTGCCGTCAGTTTAGCCAATATCTCC-TTTGAAACGACCCT--CCCCCCGGCT-TACG-TGCGTTTCTAGAAGGTCTAAGTCACTCTGTCTTGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720743 170 + 11732439 CGCTTCTGGGAGCGC-ATGG--------GTCGGAGGGGGTCTCTTCCGTCTCTGGTCTCTCCTTGGTACCATATGTGGGGCCCCCCCTGCTGTCAGCTTAGCCAGTATCTCCTTTCGAAACTACCCTCCCCCCCCGGCT-TATG-TGCGTTTCTAGAAGGTCTAAGTCACTCTGTCTTGCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22884353 163 + 22939663 CCCTCCTGGG-GTGT-TTGGTGGGCAAATCAGGGT-GGGCCTCTTACAATTCTGGTCTTACTCTGATACCACATGTGGAC-CCACCCT-GTGCAGCCCGGGCCAACGTCTTCTTTCAAAACTGCCTCT------------CACA-TGTGGTTCTAGGAGGTCTAAGCTACCACACCTGGCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181827829 130 + 182113224 -------GGGTGGTC-ATGG---------TAAGAG-GG---CCTTTCTATTTAAGTCTTTCTCTGGTACCA---GTGTGG-CTC---------------AGCCACCA-CTTCTGTTGGACCTGCCTTCCCT---------CAAG-TGTGGTTCTCCAAGATCTAATTCACTGCACCCCACC i mm10.chr2 C 0 C 0 s canFam3.chr24 47640018 124 + 47698779 ACCTTCTGGGGGAGTGGTGG--------GTGGG---TGGACCCTTCTACCT-GGGCCTCTTCTTGATACCCCATGTGGAA---------------------CCAACATCTTTC-----------------------CCCCGAAG-TGTGGTTCTAGGGGGTCTAAGTCCCAGTGCCCTGTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1896812 192 - 2029793 I e micMur3.chr18 56906141 537 + 57149010 I e dasNov3.JH569290 308202 74 - 397369 I a score=670245.000000 s hg38.chr20_KI270870v1_alt 151072 55 + 183433 CCTTCCCACATGACCAGTCATATGCAAATTGAAGTTTTTCCCAG-----GAGTCTTCTCT s panTro5.chr20 66486494 55 + 66533130 CCTTCCCACATGACCAGTCATATGCAAATTGAAGTTTTTCCCAG-----GAGTCTTCTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62153969 55 + 62195757 CCTTCCCACATGACCAGTCATATGCAAATTGAAGTTTTTCCCAG-----GAGTCTTCTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540242 55 - 578057 CCTTCCCACATGACCAGTCATATGCAAATTGAAGTTTTTCCCAG-----GAGTCTTCTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061812 55 - 110113093 CCTTCCCATGTGACCAGTCATAGGCAAGTTGAAGTTTTTCCCAG-----GAGTCTTTTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92800906 55 - 92844088 CCTTCCCACATGACCAGTCATTTGCAAATTGAAGTTTTTCCCAG-----GAGTCTTTTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466433 55 + 96509753 CCTTCCcacatgaccagtcatttgcaaattgaagtttttcccag-----gagtcttttct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936494 55 - 16982598 CCTTCCCACATGACCAGTCATTTGCAAATTGAAGTTTTTCCCAG-----GAGTCTTTTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738546 55 - 3785965 CCTTCCCACATGACCAGTCATTTGCAAATTGAAGTTTTTCCCAG-----GAGTCTTTTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90328968 55 - 90373283 CCTTCCCACATGACCAGTCATTTGCAAATTGAAGTTTTTCCCAG-----GAGTCTTTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129183 55 - 179258 CCTTCCCACATGACCAGTCATTTGCAAACTGAAGTTTTTCCCAG-----GAGTCTTTTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604667 55 - 5823884 CCTTCCCACATGACCAGTCATTTGCAAATTGAAGTTTTTCCCAG-----GAGTCTTTTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85314 55 + 372756 TTTTCCCATATGACCAGTCATATGCAAATTGAAGTTTTTCCCAG-----GAGTCTTCTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320460 55 + 16356641 TTTTCCCACATGACCAGTCATATGCAAACTGAAGTTTTTCCCAG-----GAGTCTTCTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1189369 55 + 1231380 TTTGCCCACGTGACCAGTCACATGCAAATTGAAGTTTTTCCCAG-----GAGTCTTCTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720913 55 + 11732439 TTTTCCCACATGACCAGTCACATACAAATTGAAGTTTTTCCCAG-----GAGTCTTCTCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1897004 55 - 2029793 CCTTCCCATATGACCACCCATGTGCGAATTGGAGTTTTTCCCAG-----GAGTTTCCTCT i proCoq1.NW_012150197v1 I 192 C 0 s otoGar3.GL873542 22884516 54 + 22939663 CCTTTCCATAGGACCAGGCCTGTGAAAACTGGAGTTTTCGCCAT-----G-GTTTTCTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181827959 58 + 182113224 TTTTCCCATGAG-CCAGCCGTATCCACATC-ATGCCCACCCCCGCCTCCAAGTTTTCTCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47640142 41 + 47698779 CCTGCCCACATGA-TGGGCATGTGCAATGCACAACTTTCTCT------------------ i canFam3.chr24 C 0 C 0 e micMur3.chr18 56906141 537 + 57149010 I e dasNov3.JH569290 308202 74 - 397369 I a score=189014.000000 s hg38.chr20_KI270870v1_alt 151127 15 + 183433 TAGGGTCAGGGAGAA s panTro5.chr20 66486549 15 + 66533130 TAGGGTCAGGGAGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154024 15 + 62195757 TAGGGTCAGGGAGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540297 15 - 578057 TAGGGTCAgggagaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061867 15 - 110113093 TAGGGTCAGGGAGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92800961 15 - 92844088 TAGGGTCAGGGAGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466488 15 + 96509753 tagggtcagggagaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936549 15 - 16982598 TAGGGTCAGGGAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738601 15 - 3785965 TAGGGTCAGGAAGAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329023 15 - 90373283 TAGGGTCAGGGAGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129238 15 - 179258 TAGGGTCAGGGAGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604722 15 - 5823884 TAGGGTCAGGGAGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85369 15 + 372756 TAGGGTCAGGgagaa i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189424 15 + 1231380 TAGGGTCAGGgagaa i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720968 15 + 11732439 TAGGGTCAGGGAGAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1897059 15 - 2029793 TAGGTTCAGGGGGAA i proCoq1.NW_012150197v1 C 0 I 41 s otoGar3.GL873542 22884570 5 + 22939663 TAGAA---------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828017 15 + 182113224 TAGAGTCAGGAAGAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47640183 15 + 47698779 TGGGCTCAGAGAGAA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56906141 537 + 57149010 I e dasNov3.JH569290 308202 74 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=482327.000000 s hg38.chr20_KI270870v1_alt 151142 49 + 183433 TAACTTTTCCTGCTGAGGTTGTTAGACTTGGGGGT----------GTGGAAC-----TGGGGTT s panTro5.chr20 66486564 49 + 66533130 TAACTTTTCCTGCTGAGGTTGTTAGACTTGGGGGT----------GTGGAAC-----TGGGGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154039 49 + 62195757 TAACTTTTCCTGCTGAGGTTGTTAGACTTGGGGGT----------GTGGAAC-----TGGGGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540312 49 - 578057 aaacttttcctgctgaggttgctagacttgggggt----------gtggaac-----tggggtt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061882 49 - 110113093 AAAGTTTTCCTGCTGAGGTTGTCAGACTTGGGGGT----------GTGGAAC-----TGGGGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92800976 49 - 92844088 AAAGTTTTCCTGCTGAGGTTGTTAGGCTTGGGGGT----------ATGGAAT-----TGGGGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466503 49 + 96509753 aaagttttcctgctgaggttgttaggcttgggggt----------atggaat-----tggggtt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936564 49 - 16982598 AAAGTTTTCCTGCTGAGGTTGTTAGGCTTGGGGGT----------ATGGAAT-----TGGGGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738616 49 - 3785965 AAAGTTTTCCTGCTGCGGTTGTTAGGCTTGGGGGT----------ATGGAAT-----TGGGGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329038 49 - 90373283 AAAGTTTTCCTGCTGAGGTTGTTAGGCGTGGGGGC----------GTGGAAT-----TGGGGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129253 49 - 179258 AAAGTTTTCCTGCTGAGGTTGTTAGGCTTGGGGGT----------GTGGAAT-----TGGGGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604737 49 - 5823884 AAAGTTTTCCTGCTGAGGTTGTTAGGCTTGGGGGT----------GTGGAAC-----TGGGGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85384 49 + 372756 aatgttttcctgctgaggttgttagacttgggggt----------gtggaac-----tggggct i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189439 49 + 1231380 aatgttttcctgccgaggctgttagacttgggggt----------gtggaat-----tggggct i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2720983 49 + 11732439 AATGTTTTCCTGCTGAGGTTGTTAGACTTGGGGGT----------GTGGAAT-----TGGGGCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22884575 48 + 22939663 AAAGTCTTCTTGTGGGGAGTGTTATAC-TGGGGGG----------ATGGAAT-----GAGGGCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828032 53 + 182113224 ACAGTTGTCCAGCTTGGGTTGCTAGA-TTAGAGGT----------ATGCAGTATACCTGTGCTT i mm10.chr2 C 0 I 4 s canFam3.chr24 47640198 56 + 47698779 ---GTCTTCCTGTTGGCAggggagggggtgggggtggggctgagggtgggat-----gggggtT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1897074 41 - 2029793 I e micMur3.chr18 56906141 537 + 57149010 I e dasNov3.JH569290 308202 74 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=278895.000000 s hg38.chr20_KI270870v1_alt 151191 28 + 183433 GCCCTGGGCTATCTCTCCTGGCCACAGG- s panTro5.chr20 66486613 28 + 66533130 GCCCTGGGCTATCTCTCCTGGCCACAGG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154088 28 + 62195757 GCCCTGGGCTATCTCTCCTGGCCACAGG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540361 28 - 578057 gccctgggctatctctcctggccacagg- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061931 28 - 110113093 GCCTTGGGCTATCTCTCCTGGCCACAGG- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801025 27 - 92844088 TGCC-GGGCTCTCTCTCCTGGCCACAGG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466552 27 + 96509753 tgcc-gggctctctctcctggccacagg- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936613 28 - 16982598 TGCCTGGGCTCTCTCTCCTGGCCACAGG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738665 28 - 3785965 TGCCTGGGCTCTGTCTCCTGGCCACAGG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329087 28 - 90373283 TGCCTGGGCTCTCTCTCCTGGCCACAGG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129302 28 - 179258 TGCCTAGGCTCTGTCTCCTGGCCACAGG- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604786 28 - 5823884 TCCCTGAGCTCTCTCTCCTGGCCACAGG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85433 28 + 372756 gttctgggctatctctcctggccagagg- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189488 28 + 1231380 gccctgggctgtctctcctggccagagg- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721032 28 + 11732439 GCCCTGGGCTCTCTCTCCTGGCCAGAGG- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1897115 28 - 2029793 GCCCTGGGCCGTCTCTCCTGGCCACAGG- i proCoq1.NW_012150197v1 I 41 I 302 s otoGar3.GL873542 22884623 28 + 22939663 TCTCCGGGCCATCTCTCCTGGTCACAAG- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181828089 26 + 182113224 ACCATCGTTTTTTTTTTTTTTTCATA--- i mm10.chr2 I 4 C 0 s canFam3.chr24 47640254 29 + 47698779 GCCACAGGCCATCTCTTCTGGCCACAAGG i canFam3.chr24 C 0 C 0 e micMur3.chr18 56906141 537 + 57149010 I e dasNov3.JH569290 308202 74 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=430699.000000 s hg38.chr20_KI270870v1_alt 151219 39 + 183433 ATGAAGCCATCAGT----------AGTAGGAGAGAGTTCAGACATTCTG s panTro5.chr20 66486641 39 + 66533130 ATGAAGCCATCAGT----------AGTAGGAGAGAGTTCAGACATTCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154116 39 + 62195757 ATGAAGCCATCAGT----------AGTAGGAGAGAGTTCAGACATTCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540389 39 - 578057 atgaagccatcagt----------agtaggagagagttcagacattctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061959 39 - 110113093 ACGAAGCCATCAGT----------AGTAGGAGAGAGTTCAGACATTCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801052 39 - 92844088 AGGAAGCCATCAGT----------AATAGGAGAGAGTTCAGACATTCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466579 39 + 96509753 aggaagccatcagt----------aataggagagagttcagacattctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936641 39 - 16982598 AGGAAGCCATCAGT----------AATAGGAGAGAGTTCAGACATTCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738693 39 - 3785965 AGGAAGCCATCAGT----------AATAGGAGAGAGTTCAGACATTCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329115 39 - 90373283 AGGAAGCCATCAGT----------AATAGGAGAGAGTTCAGACATTCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129330 39 - 179258 AGGAAGCCATCAGT----------AATAGGAGAGAGTTCAGACATTCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604814 39 - 5823884 AGGAAGCCATCAGT----------AATAGGAGAGAGTTCAGACATTCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85461 39 + 372756 aggaatccatcagt----------agtaggaaagagttcggacatcctg i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189516 39 + 1231380 aggaagccatcggt----------agtaggagagagttcggacactctg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721060 39 + 11732439 AGGAAGCCGTCGGT----------GGTAGGAGAGAGTTTGGACATTCTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22884652 38 + 22939663 AGGAAGCCATTTGC----------AGCAGAAGAGAAATCAGACA-TCTG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181828115 43 + 182113224 ------CCATCTTTCTTATCTATAAATAAATGAGAATTCAGATATTCTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47640283 39 + 47698779 AGGAAGCCATCTCC----------AGTATGAGAGAGCTTAGACATTCCG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1897143 302 - 2029793 I e micMur3.chr18 56906141 537 + 57149010 I e dasNov3.JH569290 308202 74 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=1365296.000000 s hg38.chr20_KI270870v1_alt 151258 134 + 183433 GAGGGGGGCAAAGCTGACA-ATGGAGG----------Tag--atgtgaaggaaa-------agggagctc---tctgatgatctttttagagctcatggacccagccatgtctgaaggcactccacccttgaactgcccagttatataaggcaatgg------------- s panTro5.chr20 66486680 134 + 66533130 GAGGGGGGCAAAGCTGACA-ATGGAGG----------Tag--atgtgaaggaaa-------agagagctc---tctgatgatctttttagagctcatggacccagccatgtctgaaggcactccacccttgaactgcccagttatataaggcaatgg------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154155 134 + 62195757 GAGGGGGGCAAAGCTGACA-ATGGAGG----------Tag--atgtgaaggaaa-------agagagctc---tctgatgatctttttagagctcatggacccagccatgtctgaaggcactccacccttgaactgcccagttatataaggcaatgg------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540428 133 - 578057 ga-gggggcaaagctgaca-atggagg----------tag--atgtggaggaaa-------agagagctc---tctgatgatctttttagaactcacggacccagccatgtctgaaggcactccacccttgaactgcccagttatataaggcaatgg------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110061998 133 - 110113093 GA-GGGGGGAAAGCTGACA-ATGGAGG----------Tag--atgtggaagaaa-------agagagttc---tctgatgatcttttcagggctcatggacccagccacgtctgaaggcactccacccttgaactgcccagttatataaggcaatgg------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801091 134 - 92844088 GAGGTGGGCAAAGCTGACA-ATGGAGG----------TAG--ATGTGGAggaga-------agagagctc---tctgatgatcttttcagagctcatggacccagccatgtctgaaggcactccacccttgaactgcccagttatgtaaggcaatgg------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466618 134 + 96509753 gaggtgggcaaagctgaca-atggagg----------tag--acgtggaggaga-------agagagctc---tctgatgatcttttcagagctcatggacccagccatgtctgaaggcactccacccttgaactgcccagttatgtaaggcaatgg------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936680 134 - 16982598 GAGGTGGGCAAAGCTGACA-ATGGAGG----------TAG--ACGTGGAggaga-------agagagctc---tctgatgatcttttcagagctcatggacccagccatgtctgaaggcactccacacttgaactgcccagttatgtaaggcaatgg------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738732 134 - 3785965 GAGGTGGGCAAAGCTGACA-ATGGAGG----------TAG--ACGTGGAggaga-------agagagctc---tctgatgatctttttagagctcatggacccagccatgtctgaaggcactccacccttgaactgcccagttatgtaaggcaatgg------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329154 134 - 90373283 GAGGTGGGCAAAGCTGACA-ACGGAGG----------TAG--ACGTGGAggaga-------agagagctc---tctgatgatctttttagagctcatggacccagccatgtctgaaggcactccacccttgaactgcccagttatgtaaggcaatgg------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129369 134 - 179258 GAGGTGGGCAAAGCTGACA-ATGGAGG----------TAG--ACGTGGAggaga-------agagagctc---tctgatgatctttttagagctcatggacccagccatctctgaaggcactccacccttgaactgcccagttatgtaaggcaatgg------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604853 134 - 5823884 GAGGTGGGCAAAGCTGACA-ATGGAGG----------gag--acgtggaggaga-------agagagctc---tctgatgatctttttagagctcatggacccagccatgtctgaaggcactctacccttgaactgcacagttatgtaaggcaatgg------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85500 133 + 372756 ga-ggaggcagagcggaca-gtacagg----------tgg--acatggaggaaa-------agagagctc---tctgatattgtttttagaactcatggacccagccatgcctgaaggcagtctacccttgaactgcccagttatgtaaagcaatgg------------- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189555 134 + 1231380 gagggaggcagagcggaca-gtgcagg----------tgg--acatggaggaaa-------acagagcac---tctgatgttgtttttagagctcatggacccagctgtgcctgaaggcactctacccttgaactgcccagttatgtaaggcaatgg------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721099 134 + 11732439 GAGGGAGGCAGAGCTGACG-GTGCAGG----------TGG--GCatggaggaaa-------agagagctc---tctgacgttgtttttagaacttatggacccagccatgcctgaaggcgctctgcccttgaactgcccagttatgtaaggcaatgg------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22884690 103 + 22939663 GAGACAGG-------------TGGAAG-----------------GTGGAGGAAG-------AATGAGCTG---TCTGCTGACATTTTCAGAGCCA--------------GGCTGAGGGCACTCTGCCCCTGAGTTTCCTAGTTACGTGAGGCAATGG------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828158 128 + 182113224 GTAcaaggcagaactgagc-actgagt----------tag--gggtg-aggaag-------agagagctc---tctgatgacc---tcacagctattagatctggctatgtctgtaggcagtctactcttggacttccca--tatgtaaggcaatgg------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47640322 154 + 47698779 GAAGGAGGCAGAGCTGAGA-ATTGGAGAGATTAAGGTTGG--AGGTGGAAGGAAGAAGGTGAGAGAACGCTCATCTTTTCATCTCTTCAgaactcctggatccagccatacctaaaggttgtccacccttgcacttcctagttctacagggcaatga------------- i canFam3.chr24 C 0 I 87 s dasNov3.JH569290 308276 115 - 397369 GGGGGAGGCAGATCCGAGAGATGGAAG----------GAGAAAGGTGGAGGAAG-------AGAGAAGGC---TCTGCTGAC--------AGCTGGCAG---------------------------CCCTGGACCTCCCAATCAGGCCAGGCAATGACTTCCATTTTTCG i dasNov3.JH569290 I 74 C 0 e proCoq1.NW_012150197v1 1897143 302 - 2029793 I e micMur3.chr18 56906141 537 + 57149010 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=521374.000000 s hg38.chr20_KI270870v1_alt 151392 86 + 183433 tttattt------tt-ttttt-------t--aagctggtATACAAGGCCAAAAAGCCAATGCAT-ACCAGCTTTAAAAAAAAAAA----GAGACTTCTCCCCT------------TTTT s panTro5.chr20 66486814 92 + 66533130 tttattt------tt-ttttt-------ttcaagctggtATACAAGGCCAAAAAGCCAATGCAT-ACCAGCTTTAAAAAAAAAAAAAAAGAGACTTCTCCCCT------------TTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154289 87 + 62195757 tttattt------tt-ttttt-------t-caagctggtATACAAGGCCAAAAAGCCAATGCAT-ACCAGCTTTAAAAAAAAAAA----GAGACTTCTCCCCT------------TTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540561 87 - 578057 tttattt------tt-ttttt-------t-caagctggtATACAAGGCCAAAAAGCCAATGCAT-ACCAGCTTTAAAAAAAAAAA----GAGACTTCTCCCCT------------TTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062131 90 - 110113093 attcttt------tc-ttttt-------ttcaagctggtATACAAGGCCAAAAAGCCAATATATAACCAGCTTTAAGAAAAAAAA---AGTGACTTCTCCCCT------------TTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801225 93 - 92844088 attcttt------tt-tttttttTTTTTTCCAAGCTGGCATACAAGGCCAAAAAGCCAATGCAA-GCCAGCTTT--AAAAAAAAA----GTGACTTCTCCCCT------------TTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466752 92 + 96509753 attcttt------tt-ttttt-ttTTTCTTCAAGCTGGCATACAAGGCCAAAAAGCCAATGCAA-GCCAGCTTT--AAAAAAAAA----GTGACTTCTCCCCT------------TTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936814 86 - 16982598 attcttt------tt-ttttt-------ttcaagcTGGCATACAAGGCCAAAAAGCCAATGCAA-GCCAGCTTT--AAAAAAAAA----GTGACTTCTCCCCT------------TTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738866 90 - 3785965 attcttt------tt-tttTT----TTTTTCAAGCTGGCATACAAGGCCAAAAAACCAATGCAA-GCCAGCTTT-AAAAAAAAAA----ATGACTTCTCCCCT------------TTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329288 92 - 90373283 attcttt------tt-tttTT---TTTTTTCAAGCTGGCATACGAGGCCAAAAAGCCAATGCAA-ACCAGCTTTAAAAAAAAAAA----GTGACTTCTCCCCT------------TTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129503 91 - 179258 attcttt------tt-ttttt---ttTTTTCAAGCTGGCATACAAGGCCAAAAAACCAATGCAA-GCCAGCTTT-AAAAAAAAAA----GTGACTTCTCCCCT------------TTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5604987 90 - 5823884 attcttt------tt-tttTT----TTTTTCAAGCTGGCATACAAGGCCAAAAAGCCAATGCAA-ACCAGCTGT-TTTTTAAAAA----GTGACTTCTCCCCT------------TTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85633 75 + 372756 at--------------tTTTT---------CAAGCTGGTATACAAGGTCAAAAAGCCAATGCAA-ACCAGTTTAAAAAAAAG--------TGACTTCTCCCCT------------TTTT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189689 86 + 1231380 attcttt------ttattttt---------caggcT-GTATACAAGGCCAAAAAGCCAATGCAT-ACCAACTTAAAAAAAAAAAA----CTGACTTCTCCCCT------------TTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721233 86 + 11732439 attcttt------tc-ttttt---------caggctggtatgCAAGGCCAAAAAGCCAATGCAT-ACCAGCTTTAAAAAAAAACA----GTGACTTCTCCCCT------------TTTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22884793 69 + 22939663 ATCCTTTCTTTACTT-TTTTT----TTTTTTTAGTTCCTGT------------------------GCTGGCTTTATGGCCTTGCA----GTGGCT-----CCT------------TTTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828286 71 + 182113224 attcctt------tt-atttg-------------------------tcttaaacGCTCATGTAC-TTTGGCTTT---------------TTTTTTCCTTTCCTTTCAGAGGTACCTTTC i mm10.chr2 C 0 C 0 s dasNov3.JH569290 308391 67 - 397369 TTTGTTT------TG-TTTTT----------------GCAT-----------AAGCTGGATTGA-GTTGGCTTTTTGTCCTTGCA-----AGGCATCTCACTG------------TTTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1897143 302 - 2029793 I e canFam3.chr24 47640476 87 + 47698779 I e micMur3.chr18 56906141 537 + 57149010 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=260970.000000 s hg38.chr20_KI270870v1_alt 151478 23 + 183433 CATTTTCGTACTTTTGTGTCAGG s panTro5.chr20 66486906 23 + 66533130 CATTTTCGTACTTTTGTGTCAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154376 23 + 62195757 CATTTTCGTACTTTTGTGTCAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540648 23 - 578057 CATTTTCATACTTTTGTGTCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062221 23 - 110113093 CATTTTCGTACTTTTGTGTCAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801318 23 - 92844088 CATTTTTGTACTTTTGTGTCAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466844 23 + 96509753 CATTTTTGTACTTTTGTGTCAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936900 23 - 16982598 CATTTTTGTACTTTTGTGTCAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738956 23 - 3785965 CATTTTTGTACTTTTGTGTCAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329380 23 - 90373283 CATTTTTGTACTTTTGTGTCAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129594 23 - 179258 CATTTTTGTACTTTTGTGTCAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605077 23 - 5823884 CATTTTTGTACTTTTGTGTCAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85708 23 + 372756 CATTTTCATTCTTTAGTGACAGG i calJac3.chrUn_GL286459 C 0 I 2 s cebCap1.NW_016107870v1 1189775 23 + 1231380 CATTTTCATTCTTTAGTGACAGG i cebCap1.NW_016107870v1 C 0 I 2 s aotNan1.NW_018500483v1 2721319 23 + 11732439 CATTTTCATTCTTTAGTGACAGG i aotNan1.NW_018500483v1 C 0 I 29 s otoGar3.GL873542 22884862 23 + 22939663 CATTCTCACACTTTTGTGCCAGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828357 23 + 182113224 TACTGTTACACTTTCATGACAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47640563 23 + 47698779 TATGTTCACACTTTAGGGTCAGG i canFam3.chr24 I 87 C 0 s dasNov3.JH569290 308458 16 - 397369 -------CTACTTTTGTTTCAGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1897143 302 - 2029793 I e micMur3.chr18 56906141 537 + 57149010 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=290266.000000 s hg38.chr20_KI270870v1_alt 151501 35 + 183433 TGGAGCTCTAGTGCTCCTAGAGTAAGACCTGGACT s panTro5.chr20 66486929 35 + 66533130 TGGAGCTCTAGTGCTCCTAGAGTAAGACCTGGACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154399 35 + 62195757 TGGAGCTCTAGTGCTCCTAGAGTAAGACCTGGACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540671 35 - 578057 TGGAGCTCTAGTGCTCCTAGAGTAAGACCTGGACT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062244 35 - 110113093 TGGAGCTCTGGCGCTCCTAGAGCAAGACTTGGACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801341 35 - 92844088 TGGAGCTCTAGTGCTCCTAGAGTAAGACTTGGACT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466867 35 + 96509753 TGGAGCTCTAGTGCTCCTAGAGTAAGACTTGGACT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936923 35 - 16982598 TGGAGCTCTAGTGCTCCTAGAGTAAGACTTGGACT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3738979 35 - 3785965 TGGAGCTCTAGTGCTCCTAGAGTAAGACTTGGACT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329403 35 - 90373283 TGGAGCTCTAGTGCTCCTAGAGCAAGACTTGGACT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129617 35 - 179258 TGGAGCTCTAGTGCTCCTAGAGTAAGACTTGGACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605100 35 - 5823884 TGGAGCTCTAGTGCTCCTAGAGTAAGACTTGGACT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85733 27 + 372756 TGAA-----AGTG--CCCAGAGTATGACTTGGAC- i calJac3.chrUn_GL286459 I 2 C 0 s cebCap1.NW_016107870v1 1189800 27 + 1231380 TGAA-----AGTG--CCCAGACTATGACTTGGAC- i cebCap1.NW_016107870v1 I 2 C 0 s otoGar3.GL873542 22884885 35 + 22939663 TGGAGTTCTAGTCCTCTCAGGGTGAGGCTTGGAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828380 27 + 182113224 TGGATTTCTTGTTTTCCCAAGTTCAGA-------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47640586 35 + 47698779 TGGAGCTCTAGCTCTCCCAGGGTGAGACTTAGGTT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 308474 34 - 397369 TGGACCTTTAGCCCTCCCAAGGTGAGACTGGTTT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1897143 302 - 2029793 I e micMur3.chr18 56906141 537 + 57149010 I e saiBol1.JH378156 16320515 0 + 16356641 C e aotNan1.NW_018500483v1 2721342 29 + 11732439 I a score=78976.000000 s hg38.chr20_KI270870v1_alt 151536 8 + 183433 ----TGGGACTT s panTro5.chr20 66486964 8 + 66533130 ----TGGGACTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154434 8 + 62195757 ----TGGGACTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540706 8 - 578057 ----TGGGACTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062279 8 - 110113093 ----TGGGGCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801376 8 - 92844088 ----TGGGGCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466902 8 + 96509753 ----TGGGGCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936958 8 - 16982598 ----TGGGGCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739014 8 - 3785965 ----TGGGGCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329438 8 - 90373283 ----TGGGGCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129652 8 - 179258 ----TGGGGCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605135 8 - 5823884 ----TGGGGCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85760 8 + 372756 ----TGGGGCTT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189827 8 + 1231380 ----TGGGGCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721371 8 + 11732439 ----TGGGGCTT i aotNan1.NW_018500483v1 I 29 C 0 s otoGar3.GL873542 22884920 8 + 22939663 ----TGGGGCTT i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181828407 2 + 182113224 ----------TT i mm10.chr2 C 0 I 1 s canFam3.chr24 47640622 3 + 47698779 ----TGG----- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 308508 12 - 397369 TGGTTAGAACTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1897143 302 - 2029793 I e micMur3.chr18 56906141 537 + 57149010 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=40452.000000 s hg38.chr20_KI270870v1_alt 151544 4 + 183433 CTAG s panTro5.chr20 66486972 4 + 66533130 CTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154442 4 + 62195757 CTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540714 4 - 578057 CTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062287 4 - 110113093 CTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801384 4 - 92844088 CTAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466910 4 + 96509753 CTAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936966 4 - 16982598 CTAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739022 4 - 3785965 CTAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329446 4 - 90373283 CTAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129660 4 - 179258 CTAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605143 4 - 5823884 CTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85768 4 + 372756 CTAG i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189835 4 + 1231380 CTAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721379 4 + 11732439 CTAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56906678 4 + 57149010 CTAG i micMur3.chr18 I 537 C 0 s otoGar3.GL873542 22884929 3 + 22939663 CTG- i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181828410 3 + 182113224 TCA- i mm10.chr2 I 1 C 0 s dasNov3.JH569290 308520 4 - 397369 CTAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1897143 302 - 2029793 I e canFam3.chr24 47640625 0 + 47698779 C e saiBol1.JH378156 16320515 0 + 16356641 C a score=1236598.000000 s hg38.chr20_KI270870v1_alt 151548 91 + 183433 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCGTCCATCTGATATGCAAACA s panTro5.chr20 66486976 91 + 66533130 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCGTCCGTCTGATATGCAAGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154446 91 + 62195757 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCGTCCGTCTGATATGCAAACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540718 91 - 578057 TCACATTAAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCGTCCATCTGATATGCAAACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062291 91 - 110113093 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-AGAATCTGGCCCTGGTGGTAGCCCTGGAGCGTCCATCTGATATGCAAACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801388 91 - 92844088 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCATTCATCTGATATGCAAACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96466914 91 + 96509753 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCATTCATCTGATATGCAAACA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16936970 91 - 16982598 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCATTCATCTGATATGCAAACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739026 91 - 3785965 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCATTCATCTGATATGCAAACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329450 91 - 90373283 TCACATTCGGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCATTCATCTGATATGCAAACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129664 91 - 179258 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCATTCATCTGATGTGCAAACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605147 91 - 5823884 TCACATTCAGCCTAAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCTGGTGGTAGTCCTGGAGCATTCATCTGATATGCAAACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85772 91 + 372756 TCACATTTAACCTGAACTGTCAACATGCTTTTGACCTCCCT-GGAATCTGGCCCCAGTGGTAGACCCGGAGCATCCATCTGACGTGCAAACA i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189839 90 + 1231380 TCACATTCAACCTGAACTGTCAATGTGC-TCCGACCTCCCT-GGAATCTGGCCCCAGTGGTAGGCCTGGCGCATCCATCTGACGTGCAAACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721383 91 + 11732439 TCACATTCAACCTGAACTGCCAGCATGCTTTTGACCCCCCT-GGAATCTGGCCCCAGTGGCAGACCTGGAGCATCCATCTGACGTGCAAACA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56906682 92 + 57149010 TCACATTCAACCTGAACTGTCAGCCTGCTTTCGACCTCCCTGGGAATCTGGCCCTAGAGGCAGACCTGGAGCTCCCATCCGACATGCAAAAA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1897445 91 - 2029793 TCACATTCAGCCTGAACTGTCAG-GTGCTTTTGACCTCCCTGGGAACCTGGCCCTCAAGGCAGACCTGGAGCTGCCACCTGACATGCAAACA i proCoq1.NW_012150197v1 I 302 C 0 s otoGar3.GL873542 22884932 92 + 22939663 TTGCTTTCAAGCTTAACTATCAATATACTTTTGACTTCCCTGGGAATCTGGCCCTAGAGGTAGATCTGGAGTTCCCACCTGACAAGCAAACA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828413 70 + 182113224 TCACATTCAAC-------------------TTGACTTCTCTAGGAATGTTG-CCGGGAAGCAGATGTGGAG--TTCTTCTTATATATAGACA i mm10.chr2 C 0 C 0 s canFam3.chr24 47640625 83 + 47698779 --ACATTCAACCTGAACTGTCAAC---CTTTGGACCTTCCTGGGAATCTGACCCTAA-GGTCAACCTGGAGCTTCCATCTGACATG---ACA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 308524 90 - 397369 TTAGATTCATTCTGAGCTGTCAACACACACCTGCCCTCCCTGAGAATCTGGCTTTGGAGGCCAAAC--GAGCTCCCACCCAATCTGCAAACA i dasNov3.JH569290 C 0 I 2800 e saiBol1.JH378156 16320515 0 + 16356641 C a score=478420.000000 s hg38.chr20_KI270870v1_alt 151639 37 + 183433 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT s panTro5.chr20 66487067 37 + 66533130 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154537 37 + 62195757 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540809 37 - 578057 AAGGATCCATCTTCACTGACAAAATCTT-AGAAATTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062382 37 - 110113093 AAGGATCCATCTTCACTGACAAATTCTT-AGAAGTTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801479 37 - 92844088 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467005 37 + 96509753 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937061 37 - 16982598 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739117 37 - 3785965 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329541 37 - 90373283 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129755 37 - 179258 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605238 37 - 5823884 AAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85863 36 + 372756 -AGGGTCCATCTTCACTGACAAATTCTT-AGAAATTCT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189929 37 + 1231380 GAGGATCCATCTTCACTGACAAATTCTT-AGAAATTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721474 37 + 11732439 AAGGGTCCGTCTTCACTGACAAGTTCTT-AGAAATTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56906774 37 + 57149010 AAGGATCTGCATTCACAGACAAATCCTT-GGACATTCT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1897536 37 - 2029793 AAGGATCTGTATTCACACACAAATCCTT-AGACATTCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22885024 33 + 22939663 GAGGATTCATATTC----ACAAAGTCTT-GGACATTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828483 36 + 182113224 GAAG--CCATTTTACCTGAGAAATTCTTAAGAGACTCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47640708 22 + 47698779 AAGGA---------------AAGTTCTT-AGAAATTCT i canFam3.chr24 C 0 I 207 e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=92033.000000 s hg38.chr20_KI270870v1_alt 151676 7 + 183433 GGACTGA s panTro5.chr20 66487104 7 + 66533130 GGACTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154574 7 + 62195757 GGACTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540846 7 - 578057 GGACTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062419 7 - 110113093 GGACTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801516 7 - 92844088 GGACTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467042 7 + 96509753 GGACTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937098 7 - 16982598 GGACTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739154 7 - 3785965 GGACTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329578 7 - 90373283 GGACTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129792 7 - 179258 GGACTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605275 7 - 5823884 GGACTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85899 7 + 372756 GGACTCA i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189966 7 + 1231380 GGACTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721511 7 + 11732439 GGACTGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56906811 7 + 57149010 GGGCCGA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1897573 7 - 2029793 GGGCGGA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22885057 7 + 22939663 GGGCTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828519 7 + 182113224 GGACTTT i mm10.chr2 C 0 C 0 e canFam3.chr24 47640730 207 + 47698779 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=460887.000000 s hg38.chr20_KI270870v1_alt 151683 33 + 183433 GTTTCCACCCTCTGCTGTAGTCAGACAGGGTCC s panTro5.chr20 66487111 33 + 66533130 GTTTCCACCCTCTGCTGTAGTCAGACAGGATCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154581 33 + 62195757 GTTTCCACCCTCTGCTGTAGTCAGACAGGGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540853 33 - 578057 GTTTCCACCCTCTGCTGTAGTCAGACAGGGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062426 33 - 110113093 GTTTCCACCCTCTGCTGTAGTCAGACAGGGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801523 33 - 92844088 GTTTCCAACCTCTGTTGTAGTCAGACAGGGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467049 33 + 96509753 GTTTCCAACCTCTGTTGTAGTCAGACAGGGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937105 33 - 16982598 GTTTCCAACCTCTGTTGTAGTCAGACAGGGTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739161 33 - 3785965 GTTTCTAACCTCTGTTGTAGTCAGACAGGGTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329585 33 - 90373283 GTTTCCAACCTCTGTTGTAGTCAGACAGGGTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129799 33 - 179258 GTTTCCAGCCTCTGTTGTAGTCAGACAGGGTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605282 33 - 5823884 ATTTCCAACCTCTGTTGTAGTCAGACAGGGTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85906 33 + 372756 GTTTCCACCCTCTGTTGTAGTCAGACAGGGTCC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1189973 33 + 1231380 GCTTCCACCCTCTGTTGTAGTCAGACAGGGTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721518 33 + 11732439 GTTTCCACCCTCTGTTGTAGTCAGACAGGGTCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56906818 33 + 57149010 GTTTCCAGCCTCGGTTCCAGTCAGACAGGGTCC i micMur3.chr18 C 0 I 199 s proCoq1.NW_012150197v1 1897580 33 - 2029793 GTTTCTAGCCTCTGTTCCAGTCAGACAGGGTCC i proCoq1.NW_012150197v1 C 0 I 261 s otoGar3.GL873542 22885064 33 + 22939663 GCTTCCAGAGTCTCTTCTGGTCAGACAGGGTCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828526 32 + 182113224 GTTTCCAGTTTCTGTTCTACACAGACAAAACC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47640937 33 + 47698779 GTTTCCAAACCCTATCTGAGTGAGACAGGGTCC i canFam3.chr24 I 207 C 0 e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=254173.000000 s hg38.chr20_KI270870v1_alt 151716 31 + 183433 ACAACACCTGTGGAGGACATTTG----ATCTGCCT s panTro5.chr20 66487144 31 + 66533130 ACAACACCTGTGGAGGACATGTG----ATCTGCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154614 31 + 62195757 ACAACACCTGTGGAGGACATGTG----ATCTGCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540886 31 - 578057 ACAACACCTGTGAAGGACATTTG----ATCTGCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062459 31 - 110113093 ACAACACCTGTGGAGGACATTTG----ACCTGCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801556 31 - 92844088 GTAGCACCTGTGGAGGACATTTG----ATCTGCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467082 31 + 96509753 GTAGCACCTGTGGAGGACATTTG----ATCTGCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937138 31 - 16982598 GTAGCACCTGTGGAGGACATTTG----ATCTGCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739194 31 - 3785965 GTAGCACCTGTGGAGGACATTTG----ATCTGCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329618 31 - 90373283 GTAGCACCTGTGGAGGACATTTG----ATCTGCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129832 31 - 179258 ATAGCACCTGTGGAGGACATTTG----ATCTGCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605315 31 - 5823884 ATAGCACCTGTGGAGGACATTTG----ATCTGCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85939 31 + 372756 AGAACAGCTGTGGAGGACATTTG----ATCTGCCC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1190006 31 + 1231380 AGAACACCCGTGGAGGACATTTG----ATCTGCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721551 31 + 11732439 AGAACAGCCGTGGAGGACATTTG----ATCTGCCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22885097 33 + 22939663 ATGACATCTGGTGGGGGCATGTGGAACATCTGC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828558 1 + 182113224 ----------------------------------A i mm10.chr2 C 0 C 0 s canFam3.chr24 47640970 28 + 47698779 AGGACTCCTG---GGGGCATTTG----GTGTGTTT i canFam3.chr24 C 0 I 4 e proCoq1.NW_012150197v1 1897613 261 - 2029793 I e micMur3.chr18 56906851 199 + 57149010 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=1680650.000000 s hg38.chr20_KI270870v1_alt 151747 180 + 183433 TCAAGGCTCCAACTGCTGGTTGTGGGGGCCCAAGCAGGTGCCAGTGCCCACTGGTGGGTTATGCAGAACATGTTCAACTGTGAGGAAGGGT-TCCTGGGGGTCCCCTTTGGTGAGGCCCCATTTGTGATGGGGAGACCAGTGGCCTGGAGTTGTACCCCTTCACGTCAGCACAGCAGATGC s panTro5.chr20 66487175 180 + 66533130 TCAAGGCTCCAACTGCTGGTTGTGGGGGCCCAAGCAGGTGCCAGTACCCACTGGTGGGTTATGCAGAACCTGTTCAACTGTGAGGAAGGGT-TCCTGGGGGTCCCCTTTGGTGAGGCCCCATTTGTGATGGGGAGACCAGTGGCCTGGAGTTGTACCCCTTCACGTCAGCACAGCAGATGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154645 180 + 62195757 TCAAGGCTCCAACTGCTGGTTGTGGGGGCCCAAGCAGGTGCCAGTACCCACTGGTGGGTTATGCAGAACCTGTTCAACTGTGAGGAAGGGT-TCCTGGGGGTCCCCTTTGGTGACGCCCCATTTGTGATGGGGAGACCAGTGGCCTGGAGTTGTACCCCTTCACGTCAGCACAGCAGATGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 540917 180 - 578057 TCAAGGCTCCAACTGCTGGTTGTGGGGGCCCAAGCTGGTGCCAGTGCCCACTGGTGGGTTATGCAGAACCTGTTCAACTGTGAGGAAGGGT-TCCTGGGGGTCCTCTTTGGTGAGGCCCCATTTGTGATGGGGGGACCAGTGGCCTGGAGTTGTACCCCTTCACGTCAGCACAGCAGATGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062490 180 - 110113093 TCAGGGCTCCAACTGCTGGTTGTGGGGGTCCGAGCAGGTCCCGGTGCTCACTGGTGGGTTATGCAGAACCTGTTCAACTGTGACGAAGGGC-TCCTGGGGGTCCCCTTTGGTGAGGCCCCGTTTGTGACAGGGAGACCAGTGGCCTGGAGTTGTACCCCTTCACATCAGCACAGCAGATGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801587 180 - 92844088 TCAGGGCTCCAACTGCTGGCTCTGGGGGCCCGAGCAGGTGCCAGTGCCTACTAGTGGGTTATGCAGAACCTGTTCAACTATGAGGAAGGGC-TCCTGGGGGTCCCCTTTGGCGAGGCCCCATTTGTGACAGGGAGACCAGTGGCCTGGAGCTGTATCCCTTTACATCAGCACAGCAGATGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467113 180 + 96509753 TCAGGGCTCCAACTGCTGGCTCTGGGGGCCCGAGCAGGTGCCAGTGCCTACTAGTGGGTTATGCAGAACCTGTTCAACTATGAGGAAGGGC-TCCTGGGGGTCCCCTTTGGCGAGGCCCCATTTGTGACAGGGAGACCAGTGGCCTGGAGCTGTATCCCTTTACATCAGCACAGCAGATGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937169 180 - 16982598 TCAGGGCTCCAACTGCTGGCTCTGGGGGCCCGAGCAGGTGCCAGTGCCTACTAGTGGGTTATGCAGAACCTGTTCAACTATGAGGAAGGGC-TCCTGGGGGTCCCCTTTGGCGAGGCCCCATTTGTGACAGGGAGACCAGTGGCCTGGAGCTGTATCCCTTCACATCAGCACAGCAGATGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739225 180 - 3785965 TCAGGGCTCCAACTGCTGGCTCTGGGGGCCCGAGCAGGTGCCAGTGCCTACTAGTGGGTTATGCAGAACCTGTTCAACTATGAGGAAGGGC-TCCTGGGGGTCCCCTTTGGTGAGGCCCCATTTGTGACAGGGAGACCAGTGGCCTGGAGCTGTATCCCTTCACATCAGCACAGCAGATGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329649 180 - 90373283 TCAGGGCTCCAACTGCTGGCTCTGGGGGCCCGAGCAGGTGCCAGTGCCTACTAGTGGGTCATGCAGAACCTGTTCAACTATGAGGAAGGGC-TCCTGGGGGTCCCCTTTGGTGAGGCCCCATTTGTGACAGGGAGACCAGTGGCCTGGAGCTGTATCCCTTCACATCAGCACAGCAGATGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 129863 180 - 179258 TCAGGGCTCCAACTGCTGGCTCTGGGGGCCCGAGCAGGTGCCAGTGCCTACTAGTGGGTTATGCAGAACCTGTTCAACTATGAGGAAGGGC-TCCTGGGGGTCCCCTTTGGTGAGGCCCCATTTGTGACAGGGAGACCAGTGGCCTGGAGCTGTATCCCTTCACATCAGCACAGCAGATGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605346 180 - 5823884 TCAGGGCTCCCACTGCTGGCTCTGGGGGCCCGAGCAGGTGCCAGTGCCTACTAGTAGGTTATGCAGAACCTGTTCAACTATGAGGAAGGGC-TCTTGGGGGTCCCCTTTGGTGAGGCCCCATTTGTGACATGGAGACCAGTGGCCTGGAGCTGTATCCCTTCACATCAGCACAGCAGATGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 85970 180 + 372756 TCAGGGCTCCAACTGCTGGCTGTGGGGGCCAGAGCAGGTGCCAGCACCCACTAGCAGGTTATGCAGAACCTGTGTGACTATGAGGAAGGGC-TCCTGGGGGTCCCCTTTAGCAAGGCCCCATTTGTGACAGGCAGATCAGTGGCCTGGAGTTGTACCCCCTCATGTCAGCATGACAGATGC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1190037 180 + 1231380 TCAGGGCTCCAACTGCTGGCTGTGGGGGCCAGAGCAGATGCCTGTGCCCACTAGCAGGTTATGCAGAATCTGTGCTGCTGTGAAGAAGGGT-TCCTGGGGGTCCCCTTTAGCAAGGCCCCATTTGTGACGGGCAGATCAGTGGCCTGGGGTTGTACCCCTTCATGTCAGCACGACAGATGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721582 179 + 11732439 TCAGGGCTCCAACTGCCGGCTGTGGGGGCCAGAGCAGGTGCCAGTGCCCACTAGCAGGTTACACAGAACCTGTGCCACAGTGAGGAAGGGC-TCCT-GGGGTCCTCTTTAGCAAGGCCCCATTTGTGACAGGCAGATCAGTGGCCTGGAGTTGGACCCCTTCACGTCGGCACGACAGATGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22885130 138 + 22939663 --------------------------------AGCA--TACCAGCACACACTAGCAGATTAGGCAGAGCCTGTGCAGCTATGAGGAAGGAT-TACTGGGGTTCTCCTTTGCTGAGGCCTCACAGGTAACAGGGAGACCAGTGGCCTGGTTTTATCCCCCTTCACG--------GCAGATGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828559 135 + 182113224 TAAGGACT----------------AGGGTCATA---------------CATGAGAGAGCCATGTAGA----------TTTTGAGGAAGAGTACCCTGGAGATTTCCTTTAACAAGGTTACACCATAGATAGT--AGTTAGTAGTCTGGGGTTACAACTCTTAACATTGGCATAGT---TGC i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1897613 261 - 2029793 I e canFam3.chr24 47640998 4 + 47698779 I e micMur3.chr18 56906851 199 + 57149010 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=380212.000000 s hg38.chr20_KI270870v1_alt 151927 42 + 183433 ------TGGGGT--G-------GGTGTGAGCAAGACCGATTCTGAAGTGTCCCCTCA s panTro5.chr20 66487355 42 + 66533130 ------TGGGGT--G-------GGTGTGAGCAAGACCGATTCTGAAGTGTCCCCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154825 42 + 62195757 ------TGGGGT--G-------GGTGTGAGCAAGACCGATTCTGAAGTGTCCCCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 541097 42 - 578057 ------TGGGGT--G-------GGTGTGAGCAAGACCGATTCTGAAGTGTCCCCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062670 42 - 110113093 ------TGGGGT--G-------GGTGTGAGCAAGACCGATTCTGAAGTGTCCCCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801767 42 - 92844088 ------AGGGGT--G-------GGTGTGAGCAAGACCGAGTCTGCAGCGTCCCCTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467293 42 + 96509753 ------AGGGGT--G-------GGTGTGAGCAAGACCGAGTCTGCAGCGTCCCCTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937349 42 - 16982598 ------AGGGGT--G-------GATGTGAGCAAGACCGAGTCTGCAGCGTCCCCTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739405 42 - 3785965 ------AGGGGT--G-------GGTGTGAGCAAGACCGAGTCTGCAGCGTCCCCTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329829 41 - 90373283 ------A-GGGT--G-------GGTGTGAGCAAGACCGAGTCTGCAGCGTCCCCTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 130043 42 - 179258 ------AGGGGT--G-------GGTGTGAGCAAGACCGAGTCTGCAGCGTCCCCTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605526 42 - 5823884 ------TGGGGT--G-------GGTGTGAGCAAGACCGAGTCTGCAGCGTCCCCTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 86150 41 + 372756 ------TGGGGT--G-------GGTGTCAGCAAGATCGATTCTAAAGTGTCCCCTC- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1190217 41 + 1231380 ------TAGGGT--G-------GGTGTCAGCAAGACCGATTCTAAAGTGTTGCCTC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721761 40 + 11732439 ------T-GGGT--G-------GGTGTCAGCAAGACTGATTCTAAAGTGCCCCCTC- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56907050 42 + 57149010 ------TGGGGT--G-------GGTGTGAGCGAGACTGATTCTGAGGCATCCCTGTT i micMur3.chr18 I 199 C 0 s otoGar3.GL873542 22885268 49 + 22939663 ------TGGGGT--GTGGACTTTGTGTGAGCAGGACTGATTCTGAGGTGTCCCTCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828694 42 + 182113224 TATGACAAGAGCCAG-------GGTATGGGCAAG--------CAGAGGGTCTCTGTT i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1897613 261 - 2029793 I e canFam3.chr24 47640998 4 + 47698779 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=260547.000000 s hg38.chr20_KI270870v1_alt 151969 26 + 183433 GCAAGCTGAGGTAAAGTCATTCTGGG s panTro5.chr20 66487397 26 + 66533130 GCAAGCTGAGGTAAAGTCATTCTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154867 26 + 62195757 GCAAGCTGAGGTAAAGTCATTCTGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 541139 26 - 578057 GCAAGCTGAGGTAAAGTCATTCTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062712 26 - 110113093 GCAAGCTGAGGTAAAGTCATTCTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801809 26 - 92844088 GCAAGCTGAGGTAAAATCATTCTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467335 26 + 96509753 GCAAGCTGAGGTAAAATCATTCTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937391 26 - 16982598 GCAAGCTGAGGTAAAATCATTCTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739447 26 - 3785965 GCAAGCTGAGGTAAAATCATTCTGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329870 26 - 90373283 GCAAGCTGAGGTAAAATCATTCTGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 130085 26 - 179258 GCAAGCTGAGGTAAAATCATTCTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605568 26 - 5823884 GCAAGCTGAGGTAAAATCATTCTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 86191 18 + 372756 --------ATGGAAAGTCATTCTGGG i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1190258 18 + 1231380 --------ATGGAAAGTCATCCTGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721801 18 + 11732439 --------AAGGAAAGTCATTCTGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56907092 25 + 57149010 GCAAGCTGAGGTGAAGTT-CTCTGGG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1897874 26 - 2029793 GCAAGCTGAGGTGAAGTTATTCTGGG i proCoq1.NW_012150197v1 I 261 C 0 s otoGar3.GL873542 22885317 15 + 22939663 GCAAGCTGAGGTGAA----------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181828736 21 + 182113224 ACAAACTGAG-----CTCATCCTAGG i mm10.chr2 C 0 I 1160 e canFam3.chr24 47640998 4 + 47698779 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=283235.000000 s hg38.chr20_KI270870v1_alt 151995 27 + 183433 GGGTATGAGAGTTGGCTGGAGAGGTGG s panTro5.chr20 66487423 27 + 66533130 GGGTATGAGAGTTGGCTGGAGAGGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154893 27 + 62195757 GGGTATGAGAGTTGGCTGGAGAGGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 541165 27 - 578057 GGGTATGAGAGTTGGCTGGAGAGGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062738 27 - 110113093 GGGTATGAGAGTTGGCTGGAGAGGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801835 27 - 92844088 GGACATGAGAGTTGGCTGGAGAGATGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467361 27 + 96509753 GGACATAAGAGTTGGCTGGAGAGATGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937417 27 - 16982598 GGACATGAGAGTTGGCTGGAGAGATGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739473 27 - 3785965 GGACATGAGAGTTGGCTGGAGAGATGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329896 27 - 90373283 GGACATGAGAGTTGGCTGGAGAGATGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 130111 27 - 179258 GGACATGAGAGTTGGCTGGAGAGATGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605594 27 - 5823884 GGACATGAGAGTTGGCTGGAGAGATGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 86209 26 + 372756 GGCC-TGAGAGCTGGCTGGAGAGGTGG i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1190276 14 + 1231380 -------------GTCTGGAGAGGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721819 26 + 11732439 GGTC-TGAGAGTTGGCTGGAGAGGTGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56907117 27 + 57149010 GAGCATGAGAGTTGGCAGGAGAGGTGG i micMur3.chr18 C 0 I 429 s proCoq1.NW_012150197v1 1897900 27 - 2029793 GGGCATGAGTGTTGGGTGGAGAGGTGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22885332 26 + 22939663 GGACATGAAGGTTAGCTGGAGAGGGG- i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47640998 4 + 47698779 I e mm10.chr2 181828757 1160 + 182113224 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=174670.000000 s hg38.chr20_KI270870v1_alt 152022 20 + 183433 GGACTATGATGTTCCTGCTA s panTro5.chr20 66487450 20 + 66533130 GGACTATGATGTTCCTGCTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154920 20 + 62195757 GGACTATGATGTTCCTGCTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 541192 20 - 578057 GGACTATGATGTTCCTGCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062765 20 - 110113093 GGACTATGATATTCCTGCTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801862 20 - 92844088 GGACTATGATGTTCCTGCTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467388 20 + 96509753 GGACTATGATGTTCCTGCTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937444 20 - 16982598 GGACTATGATGTTCCTGCTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739500 20 - 3785965 GGACTATGATGTTCCTGCTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329923 19 - 90373283 GGACTATGATGTTCCTGCT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 130138 20 - 179258 GGACTATGATGTTCCTGCTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605621 20 - 5823884 GGACTATGATGTTGCTGCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 86235 20 + 372756 GGGCTGTGATGTTCCTGCTA i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1190290 19 + 1231380 GGGCTGTGATGTTCCTGCT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721845 20 + 11732439 GGGCTGTGATGTTCCTGCTA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1897927 11 - 2029793 GGGCTG---------TGCTA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22885358 11 + 22939663 GAGCTG---------TGCTA i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47640998 4 + 47698779 I e mm10.chr2 181828757 1160 + 182113224 I e micMur3.chr18 56907144 429 + 57149010 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=1420766.000000 s hg38.chr20_KI270870v1_alt 152042 138 + 183433 GGGGACACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCATAGTTTGATAATGGCACgagctggtcacccccaagaagattctctcacttttcgcttagaggcactggctgggccaccagcctactgggagc s panTro5.chr20 66487470 138 + 66533130 GGGGACACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCATAGTTTGATAATGGCACgagctggtcacccccaagaagattctctcacttttcgcttagaggcactggctgggccaccagcctactgggagc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62154940 138 + 62195757 GGGGACACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCATAGTTTGATAATGGCACgagctggtcacccccaagaagattctctcacttttcgcttagaggcactggctgggccaccagcctactgggagc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 541212 138 - 578057 GGGGACACAGGCTGTTACCATGATGTTAGAAAGCTGCACACTCCCATAGTTTGATAATGGCACgagctggtcacccccaagaagattctctcgctttttgcttagaggcactggctgggccaccagcccactgggagc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062785 134 - 110113093 GGGGACACAGGCTGTTCCCATGATGTTAGAAAGCTGCACAATCCCATAGTTTGATAATGGCACGAGCTGGTCACCGCC---AAGATTTTCTCAGTTTTTGCTTAGAGGCACTGGCTGGGCC-TCAGCCCACTGGGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92801882 138 - 92844088 GGGGCCACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCACAGTTTGATAATGGCAtgagctggtcacccccaacaagattctctcactttttgctttgaggcactggctgggccaccagcccactgggagc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467408 138 + 96509753 GGGGCCACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCACAGTTTGATAATGGCAtgagctggtcacccccaacaagattctctcactttttgctttgaggcactggctgggccaccagcccactgggagc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937464 138 - 16982598 GGGGCCACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCACAGTTTGATAATGGCAtgagctggtcacccccaacaagattctctcactttttgctttgaggcactggctgggccaccagcccactgggagc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739520 138 - 3785965 GAGGCCACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCACAGTTTGATAATGGCAtgagctggtcacccccaacaagattctctcactttttgctttgaggcactggctgggccaccagcccactgggagc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90329942 138 - 90373283 GGGGCCACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCACAGTTTGATAATGGCAtgagctggtcacccccaacaagattctctcactttttgctttgaggcactggctgggccaccagcccactgggagc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 130158 138 - 179258 GGGGCCACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCACAGTTTGATAATGGCAtgagctggtcacccccaacaagattctctcactttttgctttgtggcactggctgggccaccagcccactgggagc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605641 138 - 5823884 GGGGCCACAGGCTGTTACCATGATGTTAGAAAGCTGCACAATCCCACAGTTTGATAATGGCAtgagctggtcacccccaagaagattctctcactttttgcttagaggcactggctgggccactagcccactgggagc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 86255 138 + 372756 GGGGAGTCAGGCTGTTACCATGATGTTAGAAAGCTGCACAGTCCCACAGCCTGATAATGGCGtgaactggtcacccccaagaagattctctcactttttgcttagaagcactggctgagccaccagcctgctgggagc i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1190309 138 + 1231380 GGGGGGTCAGGCTGTTACAACGATGTTAGAAAGCTGCACAGCCCCACAGCTTGATAATGGCAtgaactggtcacccccaagaagattctctcactttttgctcagaggcactggctgggccaccagcctgctgggagc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721865 132 + 11732439 GGGGGGTCAGGCTGTTACCATGACATTAGAAAGCTGCACAGTCCCCCAGCTTGATAATGGCATGAACTGGTCACCCCCAAGAAGATTCTCTCA-TTTTTGCTTAGAGGCAGTGGCTGAGCCACCAGCCTGCTG----- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1897938 135 - 2029793 GGGG-TACAGGCTATTACCGTGATGTTAGAAAGCTGCACAACCCCACAGTGTGACGACAGCGTGAGCTGGTC-CCCTCAAGAAGATGCTCTCACCTTCTGCTC-GAGGGGCGGGCTGGGCCACCAGCTTGCTGGGAGC i proCoq1.NW_012150197v1 C 0 I 286 s otoGar3.GL873542 22885369 107 + 22939663 GGAG-CACAGGCCATCACCACAGTGTTAGAGAGCCACA-GTCTCCACAGTCTGACAATGGCATGAGCTTGT--CCCTTGAGAAGAT---------------------------GCTGGGTCGCCAGCCAGCTGGGTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181829917 121 + 182113224 GGGAACAT-GACTATTTCTGGTGTGTTAGAAAGATGAACAACCCTACTGT-------TGGCATGAGAGGTTCAAAGCTGTGAAGATGCTGAC---TCTTGCTTTGAG------GACAGACCACTAGTCTGCTGGGTGC i mm10.chr2 I 1160 C 0 e canFam3.chr24 47640998 4 + 47698779 I e micMur3.chr18 56907144 429 + 57149010 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=2170803.000000 s hg38.chr20_KI270870v1_alt 152180 273 + 183433 tgagagaaagagcgtc-taaagtcacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggccttctctaccagcctgcaga--------ccctcctgtttactgtatccagaggataaagctcaaggtttcatccagagggaggggagtgtttgccaggctctcagagtcggggtggagttctggggaagggggctactggctcccgaaacac-tttctaccagttgt-------------cttctcccatctccaacagaatctggtgctaccagtta s panTro5.chr20 66487608 273 + 66533130 tgagagaaagagcgtc-taaagtcacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggccttctctaccagcctgcaga--------ccctcctgtttactgtatccagaggataaagctcaaggtttcatccagagggaggggagtgtttgccaggctctcagagtcggggtggagttctggggaagggggctactggctcccgaaacac-tttctaccagttgt-------------cttctcccatctccaacagaatctggtactaccagtta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62155078 273 + 62195757 tgagagaaagagcgtc-taaagtcacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggccttctctaccagcctgcaga--------ccctcctgtttactgtatccagaggataaagctcaaggtttcatccagagggaggggagtgtttgccaggctctcagagtcggggtggagttctggggaagggggctactggctcccgaaacac-tttctaccagttgt-------------cttctcccatctccaacagaatctggtgctaccagtta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 541350 273 - 578057 tgagagaaagagcgtc-taaagtcacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggccttctctaccagcccgcaga--------ccctcctgtttactgtatccagaggataaagctcaaggtttcatccagagggaggggagtgtttgccaggctctcagagtcggggtggagttctggggaagggggctactggctcctgaaacac-tttctaccagttgt-------------cttctcccatctccaacagaatctggtgctaccagtta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110062919 273 - 110113093 TGAGAGAAAGAGCGTC-TAGAGTCACAG-GCATGTGCTCTCTTAGGATTtatttttggtatggg---------------a----ccccacagctaggccttctctactagcctgcaga--------ccctcctgtttactgtatccagagaatggagctcaagctttcatccagagggaggggagtgtttgccaggctctcagagtcggggtggagttctggggaagggggctactggctcccgaaacac-tttctaccagttgt-------------cttctcccatcttcaacagaatctggtgctaccagttc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92802020 273 - 92844088 tgggagaaaaagtgtc-tagagtcacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggccttctctaccagcctgcaga--------ccctcctgtttaccatatccagagaataaagctcaaggtttcatccagagggaggggagtgtttgcctggctctcagagtcagggtggagttctggggaagggggctactggcccccgaaacac-tttctcccagtcgt-------------cctttcccatctccagcagaatttggtaccaccagttc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467546 273 + 96509753 tgggagaaaaagtgtc-tagagtcacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggctttctctaccagcctgcaga--------ccctcctgtttaccatatccagagaataaagctcaaggtttcatccagagggaggggagtgtttgcctggctctcagagtcagggtggagttctggggaagggggctactggcccccgaaacac-tttctcccagtcgt-------------cctttcccatctccagcagaatttggtaccaccagttc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937602 273 - 16982598 tgggagaaaaagtgtc-tagagtcacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggccttctctaccagcctgcaga--------ccctcctgtttaccatatccagagaataaagctcaaggtttcatccagagggaggggagtgtttgcctggctctcagagtcagggtggagttctggggaagggggctactggcccccgaaacac-tttctcccagtcgt-------------cctttcccatctccagcagaatttggtaccaccagttc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739658 273 - 3785965 tgggagaaaaagtgtc-tagagtcacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggccttctctaccagcctgcaga--------ccctcctgtttaccatatccagagaataaagctcaaggtttcatccagagggaggggagtgtttgcctggctctcagagtcagggtggagttctggggAAGGGGGCTACTGGCCCCCGAAACAC-TTTCTCCCCGTCGT-------------CTTCTCCCATCTCCAGCAGGATTTGGTACCACCagttc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90330080 273 - 90373283 tgggagaaaaagtgtc-tagagtcacag-gcatatgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggccttctctaccagcctgcaga--------ccctcctgtttaccatatccagagaataaagctcaaggtttcatccagagggaggggagtgtttgcctggctctcagagtcagggtggagttctggggaagggggatactggcccccgaaacac-tttctcccagtcgt-------------cttctcccatctccagcagaatttggtaccaccagttc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 130296 273 - 179258 tgggagaaaaagtgtc-tagagccacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ccccacagctaggccttctctaccagcctgcaga--------ccctcctgtttaccatatccagagaataaagctcaaggtttcatccagagggaggggagtgtttgcctggctctcagagtcagggtggagttctggggaagggggctactggcccccaaaacac-tttctctcagtcgt-------------cttctcccatctccagcagaatttggtaccaccagttc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5605779 273 - 5823884 tgggagaaaaagtgtc-tagagtcacag-gcatgtgctctcttaggatttatttttggtatggg---------------a----ctccacagctaggccttctctaccatcctgcaga--------ccctcctgtttaccatatccagagaataaagctcaaggtttcatccagagggaggggagtttttgcctggctctcagagttggggtggagttctggggAAGGGGGCTACTGGCCCCCGAAACAC-TTTCTCCCAGTCGT-------------CTTCTCCCATCTCCAGCAGAATTTGGTGCCACCagttc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 86393 233 + 372756 tgggag--agagtgtc-tggagtcACAG-GCATGTGCTCTC--AGGATTTATTT---------------------------------------------TTCTCTGCTATCCCGcaga--------gcctcctgtttaccatctccagagggt-aagctcaaggtttcatcaagaggga-gggagtgttggcctggctctctgagtctgggtggagttctggggaag---------ggctcccgaaacacttttctaccagttgt-------------cTTCTTGCATCTCCAACAGAATCTGGTGCTGCCAGttc i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1190447 236 + 1231380 tgggagacagagTTTC-TGGAGTCATGG-GCATGTGCTCTC--AGGATTTATTT---------------------------------------------TTCTCTGCCATCGTGCAGA--------GCCTC-------CCATCTCCGGAGGGT-AAGCTCAAGGTTTCATCCAGAGGGA-GGGAGCGATTGCCTGGCTCTCCTAGTCTGGGTGCAGTTCTGGGGAAGGGGGTGACTGGCTCCGGAGACAC-TTTCTACCCGTTGT-------------CTTCTTGCGTCTCCAGCAGAATCTGGTGCTGCCAGTTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2721997 210 + 11732439 ------------------GGAGTCACGG-GCATGTGCCCTC--GGGATTGATTT---------------------------------------------TTCTCTGCGACCCCGCAGA--------GCCTCCCGTTTTCCATCTCCAGAGGGT-AAACTCAAGGTTTCACCCAGAGGGA-GGGAGTGTTGGCCTGGCCCTCCGAGTCTGGGTGGAGTTCT----------------GGCTCCTGAAACAC-TTTCTGCCAGTTGT-------------GTTCTTGCATCTCCAGCAGAGTCTGCTGCCACCAGTTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22885476 289 + 22939663 --GGAG-------------GAGACAT-G-ACAGGTGCTGACTTTGGGTATGGGGTTGCCCCAGAGGTCCCCCCCCCACCA----CACTGCAGCTAAGACTTTTCTGCTAGTCTACACACACTCTCTctctctcacttactctctgaagagaataaagctcaagaatt-attcagagagaggggggtgttttcctggttctcagaggcagggcagggttctgggg----gctctgtcggctcctgaaatgc-tttctaccggttgtctttgtttcagcccttctcccatctccagcagagcctggtgttgctagttc i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181830038 246 + 182113224 TGGAAATGAAGGTGCCTTGAAGTCTCAGCAGATGTATTCT---AGAATTAATTTTGGTGAATTT---------------ATTCTTTCCATAGTGAAGCAATTCCTCACAGTTTGTAAA--------TACTCTC--TTACTCTTTCAAGAGAATAAAGTTCTAGTTTCTCT----GTGGAGGAGATCATTCTCC----------AATCATGGCTGGGATCTGGGG------TCTGCAGCTTCTAAAAGCAT-TTGACATCA-TCAT-------------CTTAGTTTGAATACTTGAACATCT-------CCTGTTC i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1898073 286 - 2029793 I e canFam3.chr24 47640998 4 + 47698779 I e micMur3.chr18 56907144 429 + 57149010 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=5214503.000000 s hg38.chr20_KI270870v1_alt 152453 489 + 183433 ttgg----------------------------gggttctgaggtatggacgg-tgttggctctgaactttctacactctggctagaattcagtg-ttttgtgtctcctaggccatttatttt----------gcatctgtgaattttctggcttctaaattgcattgttgt---cccctctttcatctcctcactcctgccaatgtatgccttaaaatctgtcattttaggcaggtgtaagagagaacaa-aggtaaatacaca----tgtgcaCCTGCTTTCCTTACCTGAATGGGTATGCTTCCAGT---TGATGAGCACACGACTGTCTCCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCGACATCACCCCATGAGTAAGGGAAGCCTCAAGTTCAGGTGAGA-TTTTTCCTATTAACCACTCTGTCTCCCTGAAGCCAGTAGCCTCTCAGAGGCTGCTAAAGACATGGATGTGGAGGGTTTCCTAACTGTCAGCTGATTGTGAATCCTGCAACACAGGCCATCCATGCTCCC- s panTro5.chr20 66487881 489 + 66533130 ttgg----------------------------gggttctgaggtatggacgg-tgttggctctgaactttctacactctggctagaattcagtg-ttttgtgtctcctaggccatttatttt----------gcatctgtgaattttctggcttctaaattgcattgttgt---cccctctttcatctcctcactcctgccaatgtatgccttaaaatctgtcattttaggcaggtgtaagagagaacaa-aggtaaatacaca----tgtgcaCCTGCTTTCCTTACCTGAATGGGTATGCTTCCAGT---TGATGAGCAGACGACTGTCTCCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCGACATCACCCCATGAGTAAGGGAAGCCTCAAGTTCAGGTGAGA-TTTTTCCTATTAACCACTCTGTCTCCCTGAAGCCAGTAGCCTCTCAGAGGCTGCTGAAGACATGGATGTGGAGGGTTTCCTAACTGTCAGCTGATTGTGAATCCTGCAACACAGGCCATCCATGCTCCC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62155351 489 + 62195757 ttgg----------------------------gggttctgaggtatggacgg-tgttggctctgaactttctacactctggctagaattcagtg-ttttgtgtctcctaggccatttatttt----------gcatctgtgaattttctggcttctaaattgcattgttgt---cccctctttcatctcctcactcctgccaatgtatgccttaaaatctgtcattttaggcaggtgtaagagagaacaa-aggtaaatacaca----tgtgcaCCTGCTTTCCTTACCTGAATGGGTATGCTTCCAGT---TGATGAGCACACGACTGTCTCCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCGACATCACCCCATGAGTAAGGGAAGCCTCAAGTTCAGGTGAGA-TTTTTCCTATTAACCACTCTGTCTCCCTGAAGCCAGTAGCCTCTCAGAGGCTGCTAAAGACATGGATGTGGAGGGTTTCCTAACTGTCAGCTGATTGTGAATCCTGCAACACAGGCCATCCATGCTCCC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 541623 489 - 578057 ttgg----------------------------gtgttctgaggTACGGACGG-TGTTGGCTCTGAACTTTCTACACTCTGGCTAGAATTCAGTG-TTTTGTGTCTCCTAGGCCATTTATTTT----------GCATCTGTGAATTTTCTGGCTTCTAAATTGCATTGTTGT---CCCCTCTTTCATCTCCTCACTCCTGCCAATGTGTGCCTTAAAATCTGTCATTTTAGGCAGGTGTAAGAGAGAACAA-AGGTAAATACACA----TGTGCACATGCTTTCCTTACCTGAATGGGTATGCTTCAAGT---TGATGAGCACACGACTGTCTCCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCGACATCACCCCATGAGTAAGGGAAGCCTCAAGTTCAGGTGAGA-TTTTTCCTATTAACCACTCTGTCTCCCTGAAGCCAGTAGCCTCTCAGAGGCTGCTAAAGACATGGATGTGGAGGGTTTCCTAACTGTCAGCTGATTGTGAATCCTGCAACACAGGCCATCCGTGCTCCC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110063192 489 - 110113093 ttgg----------------------------gggttatgaggtgtggacgg-tgttggctctgaactttctacactctggctagaattcagtg-ttttgtgtctcctaggccatgtatttt----------gcatctgtgaattttctggcttctaaattgcattgttgt---cccctctttcatctcctcactcctgccgatttatgccttaaaatctgtcattttagccagatgtaagagagaacaa-aggtaaatacaca----tgtacacctgctttccttacctgaaTGGGCATGCTTCAAGT---TGATGAGCACATGACTGTCTCCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCAACATCACCCCATGAGTAAGCGAAGCCTCAAGTTCAGGTGAGA-TTTTTCCTATTAACCGCTCTGTCTCCCTGAAGCCGGTAGCCTCTCAGAGGCTGCTAAAGACATGGATGTGGAGGGTTTCCTAACCGTCAGCTGATTGTGAGTCCTGCAGCACGGGCCATCCATGCTCCC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92802293 484 - 92844088 ttggg---------------------------gggttctgaggtgtggacag-tgttggttctgaactttctacactctggccagaattcagtg-ttttgggtcttctagcccattta-ttt----------gcatctgtgaattttctggcttctaaattgctttgttg-------caatttcatctcctcactcctgccgatttatgccttaaaatctgtcattttagccaggtgtaagagacaacaa-aggtaaatacaca----tatacacctgctttccttacctgaaTGGGTATGCTTCAAGC---TGATGAGCACACGACTGTCTGCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCGACAACACCCCGTGAGTAATTGAAGCCTCAAGTTCAGGCGAGA--TTTTCCTATTAACCACTCTGTCTCTCTGAAGCTGGTGGCCTCTCAGAGGCTGCTAAAGACATGGATGTGGAGGGTCTCCTAACCATCACCTGACTGTGAATCCTGCAACACAGGCCATCCATGCTCCC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96467819 484 + 96509753 ttggg---------------------------gggttctgaggtgtggacag-tgttggttctgaactttctacactctggccagaattcagtg-ttttgggtcttctagcccattta-ttt----------gcatctgtgaattttctggcttctaaattgctttgttg-------caatttcatctcctcactcctgccgatttatgccttaaaatctgtcattttagccaggtgtaagagacaacaa-aggtaaatacaca----tatacacctgctttccttacctgaaTGGGTATGCTTCAAGC---TGATGAGCACACGACTGTCTGCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCGACAACACCCTGTGAGTAATTGAAGCCTCAAGTTCAGGCGAGA--TTTTCCTATTAACCACTCTGTCTCTCTGAAGCTGGTGGCCTCTCAGAGGCTGCTAAAGACATGGATGTGGAGGGTCTCCTAACCATCACCTGACTGTGAATCCTGCAACACAGGCCATCCATGCTCCC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16937875 484 - 16982598 ttggg---------------------------gggttctgaggtgtggacag-tgttggttctgaactttctacactctggccagaattcagtg-ttttgggtcttctagcccattta-ttt----------gcatctgtgaattttctggcttctaaattgctttgttg-------caatttcatctcctcactcctgccgatttatgccttaaaatctgtcattttagccaggtgtaagagacaacaa-aggtaaatacaca----tatacaCCTGCTTTCCTTACCTGAATGGGTATGCTTCAAGC---TGATGAGCACACGACTGTCTGCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCGACAACACCCCGTGAGTAATTGAAGCCTCAAGTTCAGGCGAGA--TTTTCCTATTAACCACTCTGTCTCTCTGAAGCTGGTGGCCTCTCAGAGGCTGCTAAGGACATGGATGTGGAGGGTCTCCCAACCATCACCTGACTGTGAATCCTGCAACACAGGCCATCCATGCTCCC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3739931 485 - 3785965 ttggg---------------------------gggttctgaggtgtggacag-tgttggttctgaactttctacactctggccagaattcagtg-ttttgggtcttctagcccatttatttt----------gcatctgtgaattttctggcttgtaaattgctttgttg-------caatttcatctcctcactcctgccgatttatgccttaaaatctgtcattttagccaggtgtaagagacaacaa-aggtaaatacaca----tatacaCCTGCTTTCCTTACCTGAATGGGTATGCTTCAAGC---TGATGAGCACACGACTGTCTGCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCGACAACACCCCGTGAGTAATTGAAGCCTCAAGTTCAGGCGAGA--TTTTCCCATTAACCACTCTGTCTCTCTGAAGCTGGTGGCCTCTCAGAGGCTGCTAAAGACATGGATGTGGAGGGTTTCCTAACCATCACCTGACTGTGAATCCTGCAACACAGGCCATCCGTGCTCCC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90330353 485 - 90373283 ttgga---------------------------gggttctgaggtgtggacag-tgttggttctgaactttctacactctggccagaattcagtg-ttttgggtcttctagcccatttatttt----------gcatctgtgaattttctggcttctaaattgctttgttg-------caatttcatctcctcgctcctgccgagttatgccttaaaatctgtcattttagccaggtgtaagagacaacaa-aggtaaatacaca----tatacacctgctttccttacctgaaTGGGTATGCTTCAAGC---TGATGAGCACACGACTGTCTGCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCGACAACACCCCGTGAGTAATTGAAGCCTCAAGTTCAGGCGAGA--TTTTCCTATTAACCCCTCTGTCTCTCTGAAGCTGGTGGCCTCTCAGAGGCTGCTAAAGACATGGATGTGGAGGGTTTCCTAACCATCACCTGGCTGTGAATCCTGCAACACAGGCCATCTATGCTCCC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 130569 485 - 179258 ttggg---------------------------gggttctgaggtgtggacag-tgttggttctgaactttctacactctggccagaattcagtg-ttttgggtcttctagcccatttatttt----------gcatctgtgaattttctggcttctaaattgctttgttg-------caatttcatctcctcactcctgccgatttatgccttaaaatctgtcattttagccaggtgtaagagacaacaa-aggtaaatacaca----tatacaCCTGCTTTCCTTACCTGAATGGGTATGCTTCAAGC---TGATGAGCACACGACTGTCTGCCTGAACAG-TCAGGAAGTCAGCTTAGTGCTGGGTCGACAACACCCCGTGAGTAATTGAAGCCTCAAGTTCAGGCGAGA--TTTTCCTATTAACCACTCTGTCTCTCTGAAGCTGGTGGCCTCTCAGAGGCTGCTAAAGACGTGGATGTGGAGGGTTTCCTAACCATCCCCTGACTGTGAATCCTGCAACACCGGCCATCCGTGCCCCC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606052 485 - 5823884 ttggg---------------------------gggttctgaggtgtggacag-tgttgcttctgaactttctactctctggccagaattcagtg-ttttgggtcttccaggccatttatttt----------gcatctgtgaattttctggcttctaaattgcttttttg-------caatttcatctcctcactcctgccaatttatgccttaaaatctgtcattttagcccggtgtaagagagaacaa-aggtaaatacaca----tatacaCCTGCTTTCCTTACCTGAATGGGTATGCTTCAAGC---TGGTGAGCACACGACTGTCTGCCTGAACAG-ACGGGAAGTCAGCTTAGTGCTGGGTCAACAACACCCCGTGAGTAATTGAAGCCTCAAGTTCAGGCGAGA--TTTTCCTATTAACCACTCTGTCTCTCTGAAGCTGGTGGCCTCTCAGAGGCTGCTAAACACATGGATGTGGAGGGTTTCCTAACCATCACCTGACTGTGAATCCTGCAACACAGGCCATCCATGCTCCC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 86626 463 + 372756 ttg-----------------------------tggttctgagatgtggactg-tgttggttctgaactttctatactctggctagagttcagtg-ttttgggtctcctaggccatttctttt----------acatctgtgagttttctggcttctaaattgcattgttgt---ctcctctttcatctccaagctcttgccaattttt-tcctaaaatctgtcattttagccaggtttaagagagaacaa-gggtaaatgcaca----cgtatacctgctttccttacctgaaTGGGTTTGCTGCAAGT---TGATGAGCGCACGACTGTCTCCC-------------------------TGCTGGGTCGACGTCACCCCGTGAGTAAGTAAAGTCTCAAGTTCAGGTGAGATTTTCTCCTATGAACCACTCTG-CCCCCTGAAGCCAGTGGCCACTCAGAGGCTGCTAAAGACATGGATGTGGAGGGTGTCCTAACCGTCAGCCGACTGGGAATTGTGCAACAAAGGCCACCCATGCTCCC- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1190683 462 + 1231380 TCG-----------------------------CAGttctgagatgtggacta-tgttggttctgaactttctgtactctggctagagttcagcg-ttttgggtcgcctaggccatttctttt----------atgtc--tgaattttctggcttctaaattgcattgttgt---ctcctctttcatctcccagctcctgccaatttttggcttaaaatctgtcattttagccaggtttAAGAGAGAACAA-AGGTAAATGCACA----CGTGCACCTGCTTTCCTTACCTGAATGGGTATGCTGCAAGT---TGTTGAGCACACGACTGTCTCCC-------------------------TGCTGGGTTGACGTCACCCCATGAGTAAGTAAAGTCTCAAGTTCAAGTGAGATTTTCTCCTGTGAACCACTTTG-CCCCCTGAAACCAGTGGCCGCTCAGAGGCTGCCAAAGACATGGATGTGGAGGGTGTCCTAGCCGTCAGCTGACTGGGAAGCGTGCAACACAGGCCGCCCATGCTCCC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2722207 459 + 11732439 TCG-----------------------------TGGTTCTGAGACGTGGGCTG-TGATGGTTCTGAACTTTCTATACTCTGGCTGGAGTTCAGTG-TTTTGGGTCTCCTGGGCCATTTCTTTT----------ACGATTGTGAATTTT----CTTCTAAATCACAGTGTTGT---CTCCTCTTTCATCTCCCAGCTCCTGCCAATTTTTGCCTTAAAATCTGTCATTTTAGCCAGGTTTAAGAGAGAACAA-AGGT-AACGCACA----CGTGCACCTGCTTTCCTTCCCCGAGTGGGTTTGCTGCAAGT---TGACGAGCGCACGACTGTCTCGC-------------------------TGCTGGGTTGACGTCACCCCACGAGTAAGTAAAGTCTCAAGTTCAGGTGAGATTTTCTCCTGTGAACCACTCTG-CCCCCTGAAGCCGGTGGCCACTCAGAGGCTGCCAAAGGCGTGGATGTGGAGGGTGTCCTAACCATCAGCTGACTGGGAATCGTGCAACACAGGCCACCCATGCTCCC- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56907573 485 + 57149010 ttgg----------------------------gggttctggaatgtggactc-tgTTGGTTTTGAGCTTTCTGCACTCTGCCTAGAATTCAGTG-TTTTGGGTCTCCTGGGCCATTTATTTC----------ATATCTGTGAGTTTTCTGGCTTCTCAATTGCACTGTTGC---CTTTGCTTCCATCTCCTCACTCCTGCCAATTCATACCTTCAAAGCTGTCCCCTTAGCTGGGTTTAAGAGAGAAGCA-AGGTAGATACAGG----TGTGCACCTGCTTTCCTTACCTGGATGTGTATGCTCCAAGC---TGATGAGCACATGATGGTCTCCCTGTGCAG-ATGAGAAGTCAGCTCAGTGCTGGATCAACATCACCCCGTGAGTAAGTGGAGCCTCAAGTTCAGGTGAGACTTTCTACCCTTAACCACTCTGTCCCTGTGAAGCTGGTGG-TTCTTAGAGGCTGCTACAGATATGAGTGTGGAGGGTTTCTT----GTCAGCTGACTGTGAACCTTGTGGCACAGGCCCCCCATGCTCCC- i micMur3.chr18 I 429 I 304 s proCoq1.NW_012150197v1 1898359 467 - 2029793 ttgg----------------------------gggttctgggctgtggactc-tgttggttttgagctttccgcacgctgcctaggattcagtg-ttctgggtctcctgggccatttatgtc----------gtgtctgtgagttttctggcttctcaattgcactgttgc---ccttgcttccatctcctcactcctgcaaattcatacct------------------ctGGGTTTAAGAGAGAAGCA-AGGTAGACACAGG----TGTGCACCTGCCGTCCTTACCTGCCTGTGTATGCTCCAAGT---TGATGAGCACACGATGGTCTCCCTGTGCAG-ACGAGAAGTCGGCTCAGTCCCGGATCACCATCA-CCTGCGAGTAAGTGGAGCCTCAAGTTCAGGTGAGACTTCCTACCCTTAACCACTCTGTCCGCGTGAAGCCGGTGGCTCCTTAGAGGCTGCTACAGAGGTGGGCGTGGAGGGTTTCTT----GTCAGCTGACTGTGAACCTGGTAGCACAGGCCACCCATGCTCCC- i proCoq1.NW_012150197v1 I 286 I 282 s otoGar3.GL873542 22885765 476 + 22939663 ttga----------------------------tggttctgggatgtggggtg-tGTTGGTTCTGATGTTTCTACCCTTtggctagaattcagtg-ttttggatcgcctgggccatttatttc----------atgtctatgagttttctggcttctcaattgcattattgccatccttccttccatctctttgctcctgccaattcataccataaaagctgccattttagctgggtttaagagagaggca-----agatatggg----tgtgtacccactctccttatctggCTGTGTATGCTCCAAGTTGATGATGAGCACATGGTGGTCTCCCTGTGCAG-ATGGGAAGCCAGCTCAGTGCTGAATCAACATTGCCCCATGAGTAAGTGGAGCCTCAGTTTCAGGTGAGACTTTGTCCCCTTAACCACTCTGTCTCTGTGAAGTTGGTGG-----------CTGCTACAGATATAGGTGTAGAGGGTTTCTT----GTCAGTGAATTGTGACCCTTGCAGTG-AGGCCTTTAATGCTACC- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181830284 478 + 182113224 TTGGGATGAGGCGGGGGGGGGGGGTGCGGGGAGGATTTTAAAGGCTAGACTGTTGTTGGTTCTGAGCTTCCTATGTTCTGACTAGAACTCAGCATTTTTGTGTTTCCTGGGCCATTTGTCTCCCACTTAAGAATATTTAGGAATTTTCTGGCCTCTGAAT-ACATTATTGC---CTTCTCTTCCTCCTCCCCA-------------ATGCCTTAAAAGCTGCCATTTAGCTGAATTTTGAGAGTGAAAAACAGGTATACACAAACATTTGTACACCCCCAGTCCCTCTCAACTGGATTCTGTGCCCAGA---AGTAGACCA---------CTCCCCGTACAGCATGGGA-------TTAGTCC-------------CTCCATGATGGAGTGAAGCCTCAGGGTTAGGAGGGA--CCTACCCATTAACTAGTT-------------ATAGTGGCTTACTGGGAGCTGATATAG-CACGCGCATGAAGGGGTTCCTAAGTACTAGCTGATTGTGGGCCTTATAATGAAAATGAAGTGTATTTCCC i mm10.chr2 C 0 C 0 e canFam3.chr24 47640998 4 + 47698779 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=1199646.000000 s hg38.chr20_KI270870v1_alt 152942 135 + 183433 AGGGGTTATAGCATCTGTGCCATTCCCTCTGTCCTTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTC-TAATGGAGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGGTGCCA s panTro5.chr20 66488370 135 + 66533130 AGGGGTTATAGCCTCTGTGCCATTCCCTCTGTCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTC-TAATAGAGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62155840 135 + 62195757 AGGGGTTATAGCCTCTGTGCCATTCCCTCTGTCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTC-TAATAGAGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542112 135 - 578057 AGGGGTTATAGCCTCTGTGCCATTCCCTTTGTCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGATTGTGGACTTCTC-TAATAGAGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110063681 135 - 110113093 AGGGGTTATAGCCTCTGTGCCATTCCCTTTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTC-TAATAGAGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAGGGGCATTCTTATCCATGATCGTGGGTGGCCTGGGCCGATGCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92802777 134 - 92844088 AGGGGTTATAGCCTCTGTGCCATTCCCTTTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTCTTAAT--AGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468303 134 + 96509753 AGGGGTTATAGCCTCTGTGCCATTCCCTTTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTCTTAAT--AGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938359 134 - 16982598 AGGGGTTATAGCCTCTGTGCCATTCCCTTTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTCTTAAT--AGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740416 133 - 3785965 AGGGGTTATAGCCTCTGTGCCATTCCCTTTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTC-TAAT--AGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90330838 135 - 90373283 AGGGGTTGTAGCCTCTGTGCCATTCCCTTTGCCGTTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTC-TAACAGAGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131054 133 - 179258 AGGGGTTATAGCCTCTGTGCCATTCCCTTTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAGTGTGGACTTCTC-TAAT--AGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606537 135 - 5823884 AGGGGTTATAGCCTCTGTTCCATTCCCTTTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGCGGAGTGTGGACTTCTC-TAATGGAGTCTTA---------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATCGTGGGTGGCCTGGGCTGATGCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87089 127 + 372756 AGGGGTTATAGCCTCTGTGCCACTCTCTCTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------CGGAGGTAGAATGTGGGCCTCTC-TAATAGAGCCTT----------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATGGTGGACGGCCGGGC-------CA i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191145 127 + 1231380 AGGGGTTATAGCCTCTGTGCCGTTCTCTCTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------TGGAGGTGGAATGTGGGCCTCTC-TAATAGGGCCTT----------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTATCCATGATGGTGGATGGCCTGGG-------GA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2722666 127 + 11732439 AGGGGTTATAGCCTCTGTGCCATTCTCTCTGCCATTCTTA-----------------------------------------------------------------------AAATA-------------CGGAGGTGGAATGTGGGCCTCTC-TAATAGGGCCTT----------------AGTCTT---------------------------------------CA----------------------------CAAGGGCACCCTTGTCCATGATGGTGGATGGCCTGGG-------CA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22886242 187 + 22939663 AAGAGTTACAGTCTCTGCACCATTCCCTTTGCCATCCTTA-----------------------------------------------------------------------AAACAAGAGGTACAAGGGAGGAGGTAGAAGGTGGGCTTCCC-CAGTGGAGCCTCA---------------GTCCTTGCTTTAACAAAGTGTTAATCAGGTTGAAATAGTAGAACACA----------------------------TCAGGGCACCCTTATCCATTATTGTGGGTGTTCTGGGTCAACACCA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181830762 247 + 182113224 AGGGGCTACAATCTCTATGCTGTTCCATTTGCTATGCCTAGGACTGTGGACCTTGTCCTGTGTCTTTGACACTAAGGATTAGGGGGCTCCAAGTTCCTCCCAATATTCTGGAACTA-------------GAAGAGCAGCGTATGGAAAACTC-CAAAA-GGTCATATAGGATCAAAACAATAATCTT---------------------------------------CAGAATAAGCTAGTTTAAAATAGTAGAACCCACAGGACCCCTTATCCACAACTGTAGGTG-TCTCAGCCAGTCCTA i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1898826 282 - 2029793 I e canFam3.chr24 47640998 4 + 47698779 I e micMur3.chr18 56908058 304 + 57149010 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=466785.000000 s hg38.chr20_KI270870v1_alt 153077 43 + 183433 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC s panTro5.chr20 66488505 43 + 66533130 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62155975 43 + 62195757 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542247 43 - 578057 GGCAGCTGATCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110063816 43 - 110113093 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92802911 43 - 92844088 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468437 43 + 96509753 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938493 43 - 16982598 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740549 43 - 3785965 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90330973 43 - 90373283 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131187 43 - 179258 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606672 43 - 5823884 GGCAGCTGACCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87216 43 + 372756 GGCAGCTGACCTTTGGTAGAGCTGTGCTCT----------------------------GAGCCACTCTG--GC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191272 43 + 1231380 GGCAGCTGAGCTTTGGCAGAGCTATGCTCT----------------------------GAGCCACTCTG--GC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2722793 43 + 11732439 GGCAGCTGACCTTTGGCAGAGCTGTGCTCT----------------------------GAGCCACTCTG--GC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22886429 73 + 22939663 GGCAGCTGACCATTGGCAGAGCTGAGCTCTCAGGCTGCTGGGTGCACGCCCAGGGGCCAAGACAGTCTGAAGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831009 34 + 182113224 GGCTGCTGAC--TTGATAGAGCAGTGCTCC---------------------------------ACGCTG---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47641002 33 + 47698779 GGCAGCTGACCCTTGGGAGAG-------------------------------------GGGCCTAT-GG--GC i canFam3.chr24 I 4 C 0 e proCoq1.NW_012150197v1 1898826 282 - 2029793 I e micMur3.chr18 56908058 304 + 57149010 I e dasNov3.JH569290 308614 2800 - 397369 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=620214.000000 s hg38.chr20_KI270870v1_alt 153120 67 + 183433 CCTCACTGCACCCCAACCCTACCATCCCTCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTTCTTTCC---- s panTro5.chr20 66488548 67 + 66533130 CCTCACTGCACCCCAACCCTACCATCCCTCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTTCTTTCC---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156018 67 + 62195757 CCTCACTGCACCCCAACCCTACCATCCCTCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTTCTTTCC---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542290 67 - 578057 CCTCACTGCACCCCAACCCTACCATCCCTCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTTCTTTCC---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110063859 65 - 110113093 CCTCACTGCACCCCAAGCCCACCATCCTTCCTGGCTGCTCCCA-TTGTCTCTGC--CT---------------CTTTCTTTCC---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92802954 67 - 92844088 CCTCACTGCACCCCAAGCCCACCACCCCCCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTCCTTTCC---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468480 67 + 96509753 CCTCACTGCACCCCAAGCCCACCACCCCTCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTCCTTTCC---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938536 67 - 16982598 CCTCACTGCACCCCAAGCCCACCACCCCTCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTCCTTTCC---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740592 67 - 3785965 CCTCACTGCACCCCAAGCCCACCACCCCTCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTCCTTTCC---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331016 67 - 90373283 CCTCACTGCACCCCAAGCCCACCACCCCTCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTCCCTTCC---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131230 67 - 179258 CCTCACTGCACCCCAAGCCCACCACCCCTCCTGGCTGCTCCCA-TTGTCTCTGCCTCT---------------CTTCTTTTCC---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606715 64 - 5823884 CC-CACTGCACCCCAAGCCCACCATCCCTCCTGGCTGCTCCCA-TTGTCTCTGC--CT---------------CTTTCTTTCC---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87259 67 + 372756 CCTCACAGCACCCCAAGCCCACCCCACCTCCTGGCTGTTCCCA-TCGTCTCTGCCTCT---------------CTGTCTTTCT---- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191315 63 + 1231380 CCTCACAGCACCCCAAGCCCACCCCACCTCCTGGCTGCTCCCA-TCGTCTCTGC-------------------CTGTCTTTCT---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2722836 66 + 11732439 CCTCACAGCACCCCAAGCCCA-CCCACCTCCTGGCTGCTCCCA-TTGTCTCTGTCTCT---------------CTGTCTTTCT---- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22886502 57 + 22939663 CCTCATTGTACCCCAAACTCACCTCCCACCTTGGATGCTGTC--TTGATTCTGTCTCT---------------C------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831043 43 + 182113224 ------------------------TCCCTCCTGGATGCTTCTG-TAGTCCCTTCTTAA---------------GTTGTTTTTC---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47641035 61 + 47698779 CCTCACTGCACCCCAGATCACCTCCCCACCCCTGCTGC--CCG-CCGCCTTTGCCTTT---------------CTTTCC-------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311414 87 - 397369 CCTCTTTGCCTGCCAATCCTGCTTCTCCTCATGCTTGGCCTCACCTTTCTCCACCCCTGAAGAAACTCACCCACTTCCCTCCCTTCC i dasNov3.JH569290 I 2800 C 0 e proCoq1.NW_012150197v1 1898826 282 - 2029793 I e micMur3.chr18 56908058 304 + 57149010 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=285905.000000 s hg38.chr20_KI270870v1_alt 153187 28 + 183433 TCTCAGTGTCTGCAGCATGCAGGTCTCC s panTro5.chr20 66488615 28 + 66533130 TCTCAGTGTCTGCAGCATGCAGGTCTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156085 28 + 62195757 TCTCAGTGTCTGCAGCATGCAGGTCTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542357 28 - 578057 TCTCAGTGTCTGCAGCATGCAGGTCTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110063924 28 - 110113093 TCTCAGTGTCTGCAGCATGCAGGTCTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803021 28 - 92844088 TCTCAGTGTCTTCAGCATGCAGGTCTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468547 28 + 96509753 TCTCAGTGTCTTCAGCATGCAGGTCTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938603 28 - 16982598 TCTCAGTGTCTTCAGCATGCAGGTCTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740659 28 - 3785965 TCTCAGTGTCTTCAGCATGCAGGTCTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331083 28 - 90373283 TCTCAGGGTCTTCAGCATGCAGGTCTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131297 28 - 179258 TCTCAGTGTCTTCAGCATGCAGGTCTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606779 28 - 5823884 TCTCGGTGTCTTCAGCATGCAGGTCTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87326 27 + 372756 CTTCA-TATCTACAGCATGCAGGTCTCC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191378 27 + 1231380 TTTCA-TATCTACAGCATGCAGGTCTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2722902 27 + 11732439 TTTCA-TATCTACAGCATGCAGGTCTCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1899108 28 - 2029793 TCTCAGTGTCTGCAGTGTGTACGCCTCA i proCoq1.NW_012150197v1 I 282 C 0 s otoGar3.GL873542 22886559 11 + 22939663 -----------------TGTAGGCCTCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831086 28 + 182113224 TCTCAGTATCTGCAATATGCAGACAAGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47641096 26 + 47698779 TCTCAGTGTCTACAGTAT-CAGACCTC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311501 28 - 397369 ACTCAGCACATGCCATGTCCACGCCTGG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56908058 304 + 57149010 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=822166.000000 s hg38.chr20_KI270870v1_alt 153215 57 + 183433 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCAGCACCTGCTATGGCTG s panTro5.chr20 66488643 57 + 66533130 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCAGCACCTGCTATGGCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156113 57 + 62195757 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCAGCACCTGCTATGGCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542385 57 - 578057 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCAGCACCTGCTATGGCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110063952 57 - 110113093 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCAGCACCTGCTGTGGCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803049 57 - 92844088 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCGGCACCTGCTATGGCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468575 57 + 96509753 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCGGCACCTGCTATGGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938631 57 - 16982598 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCGGCACCTGCTATGGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740687 57 - 3785965 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCGGCACCTGCTATGGCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331111 57 - 90373283 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCGGCACCTGCTATGGCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131325 57 - 179258 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCGGCACCTGTTATGGCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606807 57 - 5823884 GTGTGTGCTGACTTTTCTAAAGCCTG--GCCTCTCCTCT-TCCAGCACCTGCTATGGCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87353 57 + 372756 ATGTATACTGACTTTTCTAAAGCCTG--GCCCATCCTCT-TCCAGCACCTTCTGTGGCTC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191405 57 + 1231380 ATATGTACTGACCTTTCTAAAGCCTG--GCCTGTCCTCT-TCCAGCACCTTCTGTGGCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2722929 57 + 11732439 ATATGTGCTGACTTTTCTAAAGCCTG--GCCTGTCCTCT-TCCAGCACCTTCTGTGGCTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56908362 57 + 57149010 GTGTGTGCGGACTTTTCTAAAGACTG--ACCTGTCCCCT-TCCAGCACTTTCTATGGCTC i micMur3.chr18 I 304 C 0 s proCoq1.NW_012150197v1 1899136 57 - 2029793 GTGTGTGCTGACTTTTCTGAAGACTG--GCCTCTCCCCT-TCTAGCACTTTCTATGGCTC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22886570 57 + 22939663 GTGTGTGCTGACTTCTCTGAAGCCTG--GCCTCTTCCCT-TCTAGCTCCTTCTATGGCTC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831114 59 + 182113224 CAGAGTGCTAATTTATCTGAAGCCTGTTACCCCCCCCCC-CCACACACACACCCTAGTTG i mm10.chr2 C 0 I 41 s canFam3.chr24 47641122 40 + 47698779 -----------------TAAAGCCTG--GCTTCTTCTCT-TCTGGCAATTTCTATGGCTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311529 56 - 397369 GTTTGTGC-GTCTCTTCTGAGGCCTG--GCTCCTCCTCTCTCCAGCACCTTCTAT-GCTC i dasNov3.JH569290 C 0 C 0 e saiBol1.JH378156 16320515 0 + 16356641 C a score=1187154.000000 s hg38.chr20_KI270870v1_alt 153272 94 + 183433 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCACCTGCTTATGTGCTCCTGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCC s panTro5.chr20 66488700 94 + 66533130 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCACCTGCTTATGTGCTCCTGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156170 94 + 62195757 Cctcctcctctccctctactgtatcttcctcccacctgcttctgtgctcctggcctctcct------ccttcctGATTTCCACCCTACCCTGCAGCTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542442 94 - 578057 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCACCTGCTTATGTGCTCCTGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064009 93 - 110113093 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCACCTGCTTATGTGCT-CTGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803106 94 - 92844088 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCATCTGCTTATGTGCTCATGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468632 94 + 96509753 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCATCTGCTTATGTGCTCATGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938688 94 - 16982598 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCATCTGCTTATGTGCTCCTGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740744 94 - 3785965 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCATCTGCTTATGTGCTCCTGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331168 88 - 90373283 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCATCTGCTTATGTGCTCCTGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCA------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131382 94 - 179258 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCATCTGCTTATGTGCTCCTGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606864 94 - 5823884 CCTCCTCCTCTCCCTCTACTGTATCTTCCTCCCATCTGCTTATGTACTCCTGGCCTCTCCT------CCTTCCTGATTTCCACCCTACCCTGCAGCTGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87410 93 + 372756 CCTCATCCTCTCCCTCCACTGTATCTTCCCCCCACCTGCTTCTGTGCTCC-GGCCTCTCCT------CCTTCCTGATTTCCACCCTAGCCTGCAGCTGCC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191462 91 + 1231380 CCTCCTCCTCTCCCTCCACTGTATCTTCCCCTCACCTGCTTATGTGCTCCTGGCCT---CT------CCTTCCTGATTTCCACCCTCGCCTGCAGCTGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2722986 94 + 11732439 CCTCCTCCTCTCCCTCCACTGTATCTTCCCCTCACCTGCTTATGTGCTCCCGGCCTCCCCT------CCTTCCTGATGTCCACCCTGGCCTGCAGCTGCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56908419 90 + 57149010 CCTCCTCCT---CCTCCACTGTACCCTCCTGTCACCT-CTTGTGCCCTCTTGGCCTCTCCT------CCTTTCTGATTTCTACTCTACCCTGCAGCTGCC i micMur3.chr18 C 0 I 22 s proCoq1.NW_012150197v1 1899193 91 - 2029793 CCTCCTCCT---CCTCCACTGTACCCTCCTGTCACCTGCCTGTGCCCTCTTGGCCTCTCCT------CCTTCCTGATTTCTACCCCACCCTGCAGCTGCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22886627 93 + 22939663 CTTCCTCCTTTCCCTCCACTATACCCTCTTGTCACATGCCTGTCCCCTCCTGGCCTCTCCT------CCTTCCTGATTTCCAC-CTACCCTGCAGCTGCC i otoGar3.GL873542 C 0 I 13 s canFam3.chr24 47641162 99 + 47698779 CCTCCTCCCCTGCTGCC-CTGGGCCCCCTTCTCATCCGGCTGTGGCCACCTGGCCTCTCCTGTAGCCCCTTCCTGGTTTCTGCCCCACCCTGCGCCTGCT i canFam3.chr24 C 0 I 4 s dasNov3.JH569290 311585 56 - 397369 CCTCATCCTCC----------TATCCTCCTTCCGT---CCTGCCCGCCCC---CCTCAGCC------CCTTGCTGATT---------------------- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181831173 41 + 182113224 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=7531.000000 s hg38.chr20_KI270870v1_alt 153366 15 + 183433 TCAGGGCTGTC-----------------------CCAG s panTro5.chr20 66488794 15 + 66533130 TCAGGGCTGTC-----------------------CCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156264 15 + 62195757 TCAGGGCTGTC-----------------------CCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542536 15 - 578057 TCAGGGCTGTC-----------------------CCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064102 15 - 110113093 TCAGGGCTGTC-----------------------CCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803200 7 - 92844088 TCGGGGC------------------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468726 7 + 96509753 TCGGGGC------------------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938782 7 - 16982598 TCGGGGC------------------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740838 7 - 3785965 TCGGGGC------------------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331256 2 - 90373283 -----GC------------------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131476 7 - 179258 TCGGGGC------------------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606958 7 - 5823884 TCGGGGC------------------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87503 15 + 372756 TTGGGGCTGTC-----------------------CCAG i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191553 15 + 1231380 TCGGGGCTGTC-----------------------CCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723080 15 + 11732439 TCGGGGCTGTC-----------------------CCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1899284 4 - 2029793 ----------------------------------CCAG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22886733 15 + 22939663 TGGGGGCTGCC-----------------------CTAG i otoGar3.GL873542 I 13 C 0 s canFam3.chr24 47641265 38 + 47698779 TGGGTGCTGTCCCCTGTGTGCTCCTCAGGCTGCACCAG i canFam3.chr24 I 4 C 0 e mm10.chr2 181831173 41 + 182113224 I e micMur3.chr18 56908509 22 + 57149010 I e dasNov3.JH569290 311641 0 - 397369 C e saiBol1.JH378156 16320515 0 + 16356641 C a score=131620.000000 s hg38.chr20_KI270870v1_alt 153381 16 + 183433 CCTATGTCCCAGCCCC s panTro5.chr20 66488809 16 + 66533130 CCTATGTCCCAGCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156279 16 + 62195757 CCTATGTCCCAGCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542551 16 - 578057 CCTATGTCCCAGCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064117 16 - 110113093 CCTATGTCCCAGCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803207 12 - 92844088 ----TGTCCCAGCCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468733 12 + 96509753 ----TGTCCCAGCCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938789 12 - 16982598 ----TGTCCCAGCCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740845 12 - 3785965 ----TATCTCAGCCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331258 12 - 90373283 ----TGTCCCAGCCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131483 12 - 179258 ----TGTCCCAGCCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606965 12 - 5823884 ----TGTCCCAGCCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87518 16 + 372756 CCTGTGTCTCAGTCCT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191568 16 + 1231380 CCTGTGTCTCAGCCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723095 16 + 11732439 CCTGTGTCTCAGCCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56908531 16 + 57149010 CCTATGACCCGGCCAC i micMur3.chr18 I 22 C 0 s proCoq1.NW_012150197v1 1899288 16 - 2029793 CCTATGACCCGGGCAC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22886748 16 + 22939663 CCTATAACCCTGGCCC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47641303 16 + 47698779 TCCACATCCTGGCCTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311641 2 - 397369 -------CC------- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181831173 41 + 182113224 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=512977.000000 s hg38.chr20_KI270870v1_alt 153397 38 + 183433 TTTCTTCT------------CATTCCCAAGGCTGATGTCTGCTGTGTGCA s panTro5.chr20 66488825 38 + 66533130 TTTCTTCT------------CATTCCCAAGGCTGATGTCTGCTGTGTGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156295 38 + 62195757 TTTCTTCT------------CATTCCCAAGGCTGATGTCTGCTGTGTGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542567 37 - 578057 TTTCTTCT------------CATT-CCAAGGCTGATGTCTGCTGTGTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064133 38 - 110113093 TTTCTCCT------------CATTCCCAAGGCTGATGTCTGCTGTGTGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803219 38 - 92844088 TTTCTCCT------------CATTCCCAAAGCTGATGTCTGCTGTGTGCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468745 38 + 96509753 TTTCTCCT------------CATTGCCAAAGCTGATGTCTGCTGTGTGCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938801 38 - 16982598 TTTCTCCT------------CATTCCCAAAGCTGATGTCTGCTGTGTGCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740857 38 - 3785965 TTTCTCCT------------CATTCCCAAAGCTGATGTCTGCTGTGTGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331270 38 - 90373283 TTTCTCCT------------CATTCCCAAAGCTGATGTCTGCTGTGTGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131495 38 - 179258 TTTCTCCT------------CATTCCCAAAGCTGATGTCTGCTGTGTGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5606977 38 - 5823884 TTTCTCCT------------CATTTCCAAGGCTGATGTCTGCTGTGTGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87534 38 + 372756 TTTCTCCT------------CATTCCCAAGGCCAATGTCTGCTATGTGCA i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191584 38 + 1231380 TTTCTCCT------------CATTCCCAAGGCCGATGTCTGCTATGTGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723111 38 + 11732439 TTTCTCCT------------CATTCCCAAGGCCGATGTCTGCTACGTGCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56908547 38 + 57149010 TTTCTCCT------------CATTCCCAAGGCTGACGGCTACTATGTGCA i micMur3.chr18 C 0 I 14 s proCoq1.NW_012150197v1 1899304 38 - 2029793 TTTCTCCT------------CATTCCCAAGGCTGATGGCTATTGTGTGCA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22886764 38 + 22939663 TTTCTCCT------------CATTTCCAAGGTTGGTGGCTGCTATTTACA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831214 38 + 182113224 CTTCTCCT------------TATCCCAGAGGATGATGTCTGCAGTGAGGA i mm10.chr2 I 41 I 2 s canFam3.chr24 47641319 48 + 47698779 --TCTCCTTCCCTAAATCAACTTCCCTACAGCACATGTCTGCCATGTGCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311643 29 - 397369 TTGTTTCC------------CACTGAAGGGGTCCGTGTCTG--------- i dasNov3.JH569290 C 0 C 0 e saiBol1.JH378156 16320515 0 + 16356641 C a score=268052.000000 s hg38.chr20_KI270870v1_alt 153435 24 + 183433 GAGAACTCCCATAC--TGTCCCCCAA s panTro5.chr20 66488863 24 + 66533130 GAGAAGTCCCATAC--TGTCCCCCAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156333 24 + 62195757 GAGAAGTCCCATAC--TGTCCCCCAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542604 24 - 578057 GAGAACTCCCATAC--TGTCCCCCAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064171 24 - 110113093 GAGAACTCCCATAC--TGTCCCCCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803257 24 - 92844088 GAGAACTCCCGTAC--TGTCCCCCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468783 24 + 96509753 GAGAACTCCCATAC--TGTCCCCCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938839 24 - 16982598 GAGAACTCCCATAC--TGTCCCCCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740895 24 - 3785965 GAGAACTCCCATAC--TGTCCCCCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331308 24 - 90373283 GAGAACTCCCATAC--TGTCCCCCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131533 24 - 179258 GAGAACTCCCATAC--TGTCCCCCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607015 24 - 5823884 GAGAACTCCCATAC--TGTCCCCCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87572 24 + 372756 GAGAACTCCTGTAC--TGTCTCCCAA i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1191622 24 + 1231380 GAGAACTCCCACAC--TGTCTCCCAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723149 12 + 11732439 GGGAACTCCCAA-------------- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1899342 24 - 2029793 AAGACCTTCCACAC--TATTCCCCAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22886802 24 + 22939663 AAGAACTTCCACAC--TGTCCCCAAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831254 20 + 182113224 GAGA---CCCACAC---ATCCCCCAA i mm10.chr2 I 2 I 2 s canFam3.chr24 47641367 24 + 47698779 GAGGACTCCCACAC--TGTTTCCCAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311672 26 - 397369 GGGAGCTCCCACTCCCCTCCCTCCAG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56908585 14 + 57149010 I e saiBol1.JH378156 16320515 0 + 16356641 C a score=62360.000000 s hg38.chr20_KI270870v1_alt 153459 7 + 183433 TCCTTTC s panTro5.chr20 66488887 7 + 66533130 TCCTTTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156357 7 + 62195757 TCCTTTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542628 7 - 578057 TCCTTTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064195 7 - 110113093 TCCTTTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803281 7 - 92844088 TCCTTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468807 7 + 96509753 TCCTTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938863 7 - 16982598 TCCTTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740919 7 - 3785965 TCCTTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331332 7 - 90373283 TCCTGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131557 7 - 179258 TCCTTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607039 7 - 5823884 TCCTTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87596 7 + 372756 TCCTTTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320515 7 + 16356641 TCGTTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1191646 6 + 1231380 -TCCTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723161 7 + 11732439 TCCTTTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1899366 7 - 2029793 GCCTGCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22886826 7 + 22939663 GTCTGCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831276 5 + 182113224 TACTT-- i mm10.chr2 I 2 C 0 s canFam3.chr24 47641391 7 + 47698779 GCCTGCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311698 7 - 397369 GCCTGCC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56908585 14 + 57149010 I a score=1159347.000000 s hg38.chr20_KI270870v1_alt 153466 84 + 183433 TTCCCTGGCTCTAGTACCTTCTGGGTATGCACTTGGATGCCCCAGAGGC-ATCAGGACACATGCCTGGGTGACCACAACAGCCTG s panTro5.chr20 66488894 84 + 66533130 TTCCCTGGCTCTAGTACCTTCTGGGTATGCACTTGGATGCCCCAGAGGC-ATCAGGACACATGCCTGGGTGACCACAACAGCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156364 84 + 62195757 TTCCCTGGCTCTAGTACCTTCTGGGTATGCACTTGGATGCCCCAGAGGC-ATCAGGACACATGCCTGGGTGACCACAACAGCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542635 84 - 578057 TTCCCTGGCTCTAGTACCTTCTGGGTATGCACTTGGATGCCCCAGAGGC-ATCAGGACACATGCCTGGGTGACCACAACAGCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064202 84 - 110113093 TTCCCTGGCTCTGGTACCTCCTGGGTACGCACTTGGATGCCCCAGAGGC-ATCAGGACACATGCCTGGGTGACCATAACAGCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803288 84 - 92844088 TTCCCTGGCTCTAGTACCTCCTGGGTGTGCACTTGGATGCCCCAGAGGC-ATCAGGACACATGCCTGGGTGAACACAACCGCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468814 84 + 96509753 TTCCCTGGCTCTAGTACCTCCTGGGTGTGCACTTGGATGCCCCAGAGGC-ATCAGGACACATGCCTGGGTGAACACAACCGCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938870 84 - 16982598 TTCCCTGGCTCTAGTACCTCCTGGGTGTGCACTTGGATGCCCGAGAGGC-ATCAGGACACATGCCTGGGTGAACACAACCGCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3740926 84 - 3785965 TTCCCTGGCTCTAGTACCTCCTGGGTATGCACTTGGATGCCCCAGAGGC-ATCAGGACACATGCCTGGGTGAACACAACCGCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331339 84 - 90373283 TTCCCTGGCTCTGGCACCTTGTGGGTATGCACGTGGATGCCCCAGGGGC-ATCAGGACACATGCCTGGGTGAACACAACCGCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131564 84 - 179258 TTCCCTGGCTCTAGTACCTCCTGGGTATGCACTTGGATGCCCCAGAGGC-ATCAGGACACATGCCTGGGTGAACACAACCGCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607046 81 - 5823884 TTCCCTGGCTCTAGTACCTTCTGGGTATGCACTTCTGTGCCCCAGGCAT-TTC---ACACGTGCCTGGGTGAAAACAACCGCCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87603 84 + 372756 TTCCCTGGCTCTAGTACCTTTGCGGTCTGCACTTGGATGCTGCAGAGGA-ATCATGTCACATGGCTGGGTGACCACAACAGCCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320522 84 + 16356641 TTCCCTGGCTCTAGTACCTTCTGGGTCTGCACTTGGATGCCCCAGAGGC-ATCATGACACATGGCTGGGTGACCACAACAGCCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1191652 84 + 1231380 GTCCCTGGCTCTAGTACCTTCTGGGTCTGCACTTGGATGCCCCAGAGGC-ATCATGACACATGGCTGGGTGACCACAACAGCCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723168 84 + 11732439 TTCCCTGGCTCTAGTACCTTCTGGGTCTGCACTTGGATGCCACAAGGGC-ATCATGACACATGGCCAGGTGACCACAACAGCCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56908599 83 + 57149010 TTCCCTGGCT-TAGAACCTTCTGGGTTTCCACTTGGATGTCCCGTAGGC-ATCAGGACACATGGCCAGGTGACCACAACAGCCTG i micMur3.chr18 I 14 I 100 s proCoq1.NW_012150197v1 1899373 84 - 2029793 TTCTCTGACTCTAGAACCTTCTGGGTTTCCACTTGGATGCCTCATAGGC-ATCAGGACACATGGCCAGGTGACCACAATAGCCTG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22886833 79 + 22939663 TTC-----CTCTAGAACCTTCTGTATTTCCACTTGGATGTCCCACAGGC-ATCAGGACACATGCCTAGGTGACCGCAACAGCCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831281 68 + 182113224 -ATCTCAGCTCTGATACCTTCTGGAGCTCCACTTGTATATTTTA----C-ATC-----------CCCAGTGACTACAGCAGCCCA i mm10.chr2 C 0 C 0 s canFam3.chr24 47641398 84 + 47698779 TTTCCCAGTTCTAGAACTTTCCGGGACTCCACCTGGATATTCCACAGGC-CATAGGACATGTACCCAGTTGGCCATAATAGCCCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311705 44 - 397369 TTTCCCTGCTCTGGCGCCTCCTGG-------------CCTCCCACAGACTGTCAGGA---------------------------- i dasNov3.JH569290 C 0 C 0 a score=1289935.000000 s hg38.chr20_KI270870v1_alt 153550 111 + 183433 CT-----CGCTACGCCCA-CCTGGTCCTCTCTGGGCCCAGCAAGATACCAACCCCCATCAGCC-CCTGGTCTTCACTCACCCAGCTGAAGGTCACATGGCCATACGGGAGTTGCCAAC s panTro5.chr20 66488978 111 + 66533130 CT-----CGCTACGCCCA-CCTGGTCCTCTCTGGGCCCAGCAAGATACCAACCCCCATCAGCC-CCTGGTCTTCACTCACCCAGCTGAAGGTCACATGGCCATACGGGAGCTGCCAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156448 111 + 62195757 CT-----CGCTACGCCCA-CCTGGTCCTCTCTGGGCCCAGCAAGATACCAACCCCCATCAGCC-CCTGGTCTTCACTCACCCAGCTGAAGGTCACATGGCCATACGGGAGCTGCCAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542719 111 - 578057 CT-----CGCTACGCCCA-CCTGGTCCTCTCTGGGCCCAGCAAGATACCAACCCCCATCAGCC-CCTGGTCTTCACTCACCCAGCTGAAGGTCACATGGCCATACGGGAGCTGCCAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064286 111 - 110113093 CC-----CACTACTCCCA-CCTGGTCCTCTCTGGGCCCAGCAAGATACCAACCCCCATCAGCC-CCTGGTGTTCAGTCACCCAGCTGAAGGTCACGTGGCCATATGAGAGCTGCCAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803372 110 - 92844088 CC-----CGCTACTCCCA-CCTGGTCCTTTCTGGGCCCAGCAAGACACCAACCCCCATCAGCC-CC-GGACTTCACTCACGCAGCCGAAGGTCACATGGCCACACAAGAGCCCCTAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96468898 110 + 96509753 CC-----CGCTACTCCCA-CCTGGTCCTTTCTGGGCCCAGCAAGACACCAACCCCCATCAGCC-CC-GGACTTCACTCACGCAGCCGAAGGTCACATGGCCACACGAGAGCCCCTAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16938954 110 - 16982598 CC-----CGCTACTCCCA-CCTGGTCCTTTCTGGGCCCAGCAAGACACCAACCCCCATCAGCC-CC-GGACTTCACTCACGCAGCCGAAGGTCACATGGCCACACTAGAGCCCCTAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741010 110 - 3785965 CC-----CGCTACTCCCA-CCTGGTCCTTTCTGGGCCCAGCAAGACACCAACCCCCATCAGCC-CCTGGTCTTCAC-AACGCAGCTGAAGGTCACATGGCCACACGAGAGCCCCTAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331423 111 - 90373283 CC-----CGCCACTCCCA-CCTGGTCCTTTCTGGGCCCAGCAAGACACCAACCCCCATCAGCC-CCTGGTCTTCAGTCACGCAGCTGAAGGTCACATGGCCACACGAGAGCCCCTGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131648 111 - 179258 CC-----CGCTACTCCCA-CCTGGTCCTTTCTGGGCCCAGCAAGACACCAACCCCCATCAGCC-CCTGGTCTTCACTCACGCAGCTGAAGGTCACATGGCCACACGAGAGCCCCTAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607127 111 - 5823884 CC-----CGCTACTCCCA-CCTGGTCCTTTCTGGGCCCAGCAAGACACCAACCCCCATCAGCC-CCTGGTCTTCACTCACGCAGCTGAAGGTCACATGGCCACACGAGAGCCCCTAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87687 111 + 372756 CC-----CACTACTCCCA-CCTGGCCCTCTCTGAGCCCAGCGAGGCCCGAAACCCCATCAGCC-CCTGGTCTTCACTTACCCAGCTGAAGGTCACATGGCCATACGAGAGCTGCCAAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320606 116 + 16356641 CCCGCTGCGCTACTTCCA-CCTGGCCCTCTCTGAGCCCAGCGAGGCCCAAACCCCCATCAGCT-CCTGGTCTTCACTCACCCAGCTGAAGATCACATGGCCACACAAGAGCTGCCAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1191736 111 + 1231380 CC-----CGCTGCTCCCA-CCTGGCCCTCTCTGAGCCCAGCGAGGCCCAAACCCCCATCAGCC-CCTGGTCTTCACTCACCCAGCTGAAGGTCACATGGCCATACAAGAGCTGCCAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723252 111 + 11732439 CC-----CGCTACTCCCA-ACTGGCCCTCTCTGAGCCCAGCGAGGCTCGAACCCCCATCAGCC-CCTGGTCTTCACTCACCCAGCTGAAGGTCACGTGGCCATACGAGAGCTGCCAAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1899457 102 - 2029793 AC-----TGCTACTTTGAGCCTGGCCCTCCCTGGGCCCAGCAGGGCAC----------CAGCC-CCTACTCTTCACTCAGCCAACGGAAGGTCTCATGGCCACATGAGAGTTGCCAGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22886912 102 + 22939663 AC-----TACTGCTCCCAGCCTTGCCGTCCCTGGGCCTAGCAAGGCAC----------TAGAC-CCTGGTCTTCATTCATGTAGCTGAAGGTCTTATGGCCACATGAGAGCTGCCAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831349 101 + 182113224 TT-----GGCTGCTCCAAGTCTGGACCTCCCTGGACTCAGCAAGTCACCAATCTCCATCAGCT-TCT-----------ACCCTAAGTAAGATCTCACAGCCACACCAGAGCTGCCAAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47641482 91 + 47698779 CT-----GGCTGCTCCCAGCCTAACCCTCCCTGGGCTCAGCAAGATACCAACCC----------------------TCACCCAGCCGAAGAGATCATGGCTACACGCAAGCTACCAAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311749 60 - 397369 -------------GGCCA-CCAGGTCACCACTG-------------------------CAGCTGCTTGGGCTCCAGTCACTCACCTG----TCTTCTGGCCAT--------------- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56908682 100 + 57149010 I a score=786315.000000 s hg38.chr20_KI270870v1_alt 153661 76 + 183433 AGGGGCCACAACTGCCTGATGTGCCACATGAATGTGAATGCCCCTGTGGAGCACCCAGCTTGTGCTATGTGCCACC s panTro5.chr20 66489089 76 + 66533130 AGGGGCCACAACTGCCTGATGAGCCACATGAATGTGAATGCCCCTGTGGAGCACCCAGCTTGTGCTATGTGCCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156559 76 + 62195757 AGGGGCCACAACTGCCTGATGTGCCACATGAATGTGAATGCCCCTGTGGAGCACCCAGCTTGTGCTATGTGCCACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542830 76 - 578057 AGGGGCCACAACTGCCTGATGTGCCACATGAATGTGAATGCCCCTGTGGAGCACCCAGCTTGTGCTATGTGCCACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064397 74 - 110113093 AGGGGCCACAACTGACTGATGTGCCACGTGAATGTGAATGCCCC--TGGCGTACCCAGCTTGTGCTATGTGCCACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803482 67 - 92844088 ------CACAGCTGCCTGATGTGCCACGTGAATGTGAATG-CCCTGGGGAGCACCCAGCTTCTGC--TGTGCCACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469008 67 + 96509753 ------CACAGCTGCCTGATGTGCCACGTGAATGTGAATG-CCCTGGGGAGCACCCAGCTTCTGC--TGTGCCACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939064 67 - 16982598 ------CACAGCTGCCTGATGTGCCACGTGAATGTGAATG-CCCTGGGGAGCACCCAGCTTCTGC--TGTGCCACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741120 67 - 3785965 ------CACAGCTGCCTGATGTGCCACGTGAATGTGAATG-CCCGGGGGAGCACCCAGCTTCTGC--TGTGCCACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331534 67 - 90373283 ------CACAGCTGCCTGATGTGCCACGTGAATGTGAATG-CCCTGGGGAGCACCCAGCCTCTGC--TGTGCCACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131759 67 - 179258 ------CACAGCTGCCTGATGTGCCCCGTGAATGTGAATG-CCCTGGGGAGCACCCAGCTTCTGC--TGTGCCACT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607238 67 - 5823884 ------CACAGCTTCCTGATGTGCCACATGAATGTGAATG-CCCTGGGGAGCACCCAGCTTCTGC--TGTGCCACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87798 76 + 372756 AGGGGCCACAACTGCCTGATGTGCCACATGAATGTGAATGCCTCTGTGGTGCACCCAGCTTGTGCTATGTGCCACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320722 76 + 16356641 AGGGGCCACAAATGCCTGATGTGCCACATGAATGTGAATGCCTCTGTGGAGCACCCAGCTTGTGCCATGTGCCACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1191847 76 + 1231380 AGGGGCCACAACTGCCTGATGTGCCACATGAATGTGAACGCCTCTGCGGAGCACCCAGCTTGTGCTATGTGCCACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723363 71 + 11732439 AGGGGCCACAACTGCCTGATGTGCCACATGAATGTGAACGCC-----GGGGCGCCCAGCTTGTGCTATGTGCCACC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56908782 75 + 57149010 AGGGGCCACAACTGCCTAATTTGCCACATGGGTGTG-ATGCCTCCATGGAGCACCAACCTGGTGGTATGTGCCACC i micMur3.chr18 I 100 I 32 s proCoq1.NW_012150197v1 1899559 76 - 2029793 AGGGGCCACAACTGCCTAATCTGCCACATGGATGTGAATACCTGCGTGGAGCACCAACCTGGTGGTATGTGCCACT i proCoq1.NW_012150197v1 C 0 I 152 s otoGar3.GL873542 22887014 74 + 22939663 AGGGGCCCTAACTGCCTGACATG-CACACGGATGTTGATG-CTCCATGGCGTGCCAGCCTGGTGCTATGTGCCACG i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181831450 51 + 182113224 GTGGATCACCACTG------------------------TGTCTCCTTGAAACACCTACCCAGTAATAT-TGCTACC i mm10.chr2 C 0 I 1 s canFam3.chr24 47641573 74 + 47698779 AGGGGCCACAG-TGCTCGTGCTGTCACATGGGTGTGAATG-TTCCCATGAACACCAATCTGGTCACGTTTGCCACC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311809 8 - 397369 --------------------------------------------------------------------GTGTCACC i dasNov3.JH569290 C 0 C 0 a score=-10646.000000 s hg38.chr20_KI270870v1_alt 153737 1 + 183433 -C s panTro5.chr20 66489165 1 + 66533130 -C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156635 1 + 62195757 -C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542906 1 - 578057 -C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064471 1 - 110113093 -C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803549 1 - 92844088 -G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469075 1 + 96509753 -G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939131 1 - 16982598 -G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741187 1 - 3785965 -G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331601 1 - 90373283 -G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131826 1 - 179258 -G i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607305 1 - 5823884 -A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87874 1 + 372756 -C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320798 1 + 16356641 -C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1191923 1 + 1231380 -C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723434 1 + 11732439 -C i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47641647 1 + 47698779 -C i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 311817 1 - 397369 T- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1899635 152 - 2029793 I e mm10.chr2 181831501 1 + 182113224 I e micMur3.chr18 56908857 32 + 57149010 I e otoGar3.GL873542 22887088 2 + 22939663 I a score=285826.000000 s hg38.chr20_KI270870v1_alt 153738 31 + 183433 CATGGGG--CCAACCATAG-AGCAGCCCTGACTA s panTro5.chr20 66489166 31 + 66533130 CACGGGG--CCAACCATAG-AGCAGCCCTGACTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156636 31 + 62195757 CACAGGG--CCAACCATAG-AGCAGCCCTGACTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542907 31 - 578057 CATGGGG--CCAACCATAG-AGCAGCCCTGACTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064472 31 - 110113093 CATGGGG--CCAACCATAG-AGCAGCCCTGACTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803550 31 - 92844088 CATGGGG--CCAACCATAG-AGCAGCTCTGACAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469076 31 + 96509753 CATGGGG--CCAACCATAG-AGCAGCTCTGACAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939132 31 - 16982598 CATGGGG--CCAACCATAG-AGCAGCTCTGACAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741188 31 - 3785965 CATGGGG--CCAACCATAG-AGCAGCTCTGACAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331602 31 - 90373283 CATGGCG--CCAACCATAG-AGCAGCTCTGACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131827 31 - 179258 CATGGGG--CCAACCATAG-AGCAGCTCTGACAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607306 31 - 5823884 GATGGGG--CCAACCATAG-AGCAGCTCTGACAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87875 30 + 372756 CAGAGGG---CAACCACAG-AGCAGCCCTGACCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320799 29 + 16356641 CAT-GGG---CAGCCATAG-AGCAGCCCTGACAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1191924 30 + 1231380 CCTGGGA---CAGCCATAG-AGCAGCCCTGACAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723435 30 + 11732439 CATGGGG---CCACCATAG-AGCAGCCCTGACAA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22887090 31 + 22939663 TATGGGG--CCAGCCGTGG-AGTAGCCCAGACAG i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181831502 26 + 182113224 ----GGATTCCAACCATC----CAATGATGCCAA i mm10.chr2 I 1 I 3 s canFam3.chr24 47641649 32 + 47698779 GACGGGG--CCACCCATGGCAACTGTCCTAATGA i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 311818 24 - 397369 -GAGGGG--CCTCACACTG-GGGAGGCA------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1899635 152 - 2029793 I e micMur3.chr18 56908857 32 + 57149010 I a score=518388.000000 s hg38.chr20_KI270870v1_alt 153769 49 + 183433 GGGCAGGTGTA-TGATGTGGGGGAAGAATGGATGGTTATTTTGGATCCTG s panTro5.chr20 66489197 49 + 66533130 GGGCAGGTGTA-TGATGTGGGGGAAGAATGGATGGTTATTTTGGATCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156667 49 + 62195757 GGGCAGGTGTA-TGATATGGGGGAAGAATGGATGGTTATTTTGGATCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542938 49 - 578057 GGGCAGGTGTA-TGATGTGGGGGAAGAATGGATGGTTATTTTGGATCCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064503 49 - 110113093 GAGCAGGTGTA-TGATATGGGGGAAGAATGGATGGTTATTTTGGATCCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803581 49 - 92844088 GGGCAGGTGTA-TGATGTGGGGGAAGAAGGGATGGTTATTTTGGATCCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469107 49 + 96509753 GGGCAGGTGTA-TGATGTGGGGGAAGAAGGGATGGTTATTTTGGATCCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939163 49 - 16982598 GGGCAGGTGTA-TGATGTGGGGGAAGAAGGGATGGTTATTTTGGATCCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741219 49 - 3785965 GGGCAGGTGTA-TGATGTGGGGGAAGAAGGGATGGTTATTTTGGATCCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331633 49 - 90373283 GGGCAGGTGTA-TGATGTGGGGGAAGACGGGATGGTTATTTTGGATCCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131858 49 - 179258 GGGCAGGTGTA-CGATGTGGGGGAAGAAGGGATGGTTACTTTGGATCCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607337 49 - 5823884 GGGCAGGTGTA-TGATGTGGGGGAAGAAGGGATGGTTATTTTGGATCCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87905 47 + 372756 G-GCAGGTGTA-CGAAGTGGGGGAAGAATGGATGCTTATTTTAGAT-CAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320828 47 + 16356641 G-GCAGGTGTA-TGAAGTGGGGGAAGAATGGATGGTTATTTTGGAT-CGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1191954 47 + 1231380 G-GCAGGTGTA-TGAAGTGGGGGAGGCATGGATGGTTATTTTGGAT-CGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723465 47 + 11732439 G-GCAGGTGTA-TGAAGTGGGGGAAGAATGGATGGTTATTTTGGAT-CGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56908889 49 + 57149010 GGGCTGGTGTG-TGATGTGGAGGAAGAAAGGATAGTTATTTGGGATCCTG i micMur3.chr18 I 32 I 161 s otoGar3.GL873542 22887121 44 + 22939663 AGGCTGGTGTG-TGAAGTGGAGGAAGA----ACAGTGGCCCGTGCCTTT- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831531 48 + 182113224 GAGCAAGTTCA-CTGAGGAGAGGAAGAATAAATGATTATTTGGGGCCTT- i mm10.chr2 I 3 C 0 s canFam3.chr24 47641681 46 + 47698779 -GGACGGTGTA-TGGCTTGAGGAAAGACAGG-CAGTTATTTGGGTTTCA- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311842 26 - 397369 GTGCGGGTGTGCCTGCGCGGGGGCTG------------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1899635 152 - 2029793 I a score=766882.000000 s hg38.chr20_KI270870v1_alt 153818 73 + 183433 GGGAAAGCCACGCAGGGATACGTGCACAACAGCACAGTCTGTGCCCTGCCCAGCAT--------GTGGACACAGTGACTCC s panTro5.chr20 66489246 73 + 66533130 GGTAAAGCCACGCAGGGATACGTGCACAACAGCACAGTCTGTGCCCTGCCCAGCGT--------GTGGACACAGTGACTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156716 73 + 62195757 GGTAAAGCCACGCAGGGATACGTGCACAACAGCACAGTCTGTGCCCTGCCCAGCGT--------GTGGACACAGTGACTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 542987 73 - 578057 GGGAAAGCCACGCAGGGATACGTGCACAACAGCACAGTCTGTGCCCTGCCCAGCAT--------GTGGACACAGTGACTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064552 73 - 110113093 GGGAAAGCCATGCAGGGATACGTGCATAACAGCACAGTCTGTGCCCTGCCCAGCAT--------GTGGACACAGTGACTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803630 73 - 92844088 GGGAAAGCCATGCAGGGATACATGTACAACAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGACACAGCGACTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469156 73 + 96509753 GGGAAAGCCATGCAGGGATACATGTACAACAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGACACAGCGACTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939212 73 - 16982598 GGGAAAGCCATGCAGGGATACATGTACAACAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGACACAGCGACTCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741268 73 - 3785965 GGGAAAGCCATGCAGGGATACATGTACAACAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGACACAGCGACTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331682 73 - 90373283 GGGAAAGCCATGCAGGGATACATGTACAACAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGACACAGCGACTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131907 73 - 179258 GGGAAAGCCATGCAGGGATACATGTACAACAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGACACAGCGACTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607386 73 - 5823884 GGGAAAGCCATGCAGGGATACATGTACAACAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGACACAGTGACTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 87952 73 + 372756 AATAAAGCCATGCAGGGATGTGTGTACAGCAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGATGTAGTGACTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320875 73 + 16356641 AATAAAGCCATGCAGGGATGTGTGTACAGCAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGACGCAGTGACTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192001 73 + 1231380 AATGAAGCCATGCAGGGATGTGTGTACAGCAGCACAGTCTGTGCCCTGCCCACCAT--------GTGGACGCAGTGACTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723512 73 + 11732439 AATAAAGCCATGCAGGGATGTGTGTACAGCAGCACAGTCTGTGCCCTGCCCACCAC--------GTGGACACAGTGACTTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22887165 57 + 22939663 -GTGAAG---TACAGGG------------CAGTGCAGGTTGGGACCCACCCACCAG--------GTGGCCACAGTGAGATT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831579 68 + 182113224 TGAAAGGCAACATGTGAATATGGATACTAGGGAATGTGCAGCACCCTCCCCA-CAT--------GTGAA--CAGTGTCT-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47641727 81 + 47698779 TGTCTAGCTGTGCAGGGATGCATGTATCATGGCCCCAGCCATGCCCTGCCTTCCGTAGGGGACAGTGGACACCGTGACTCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311868 34 - 397369 --------------GGGGTG--------------------GCCCCCAGCCAGGCGT--------GGGGA----GTGCTTT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1899635 152 - 2029793 I e micMur3.chr18 56908938 161 + 57149010 I a score=1146980.000000 s hg38.chr20_KI270870v1_alt 153891 97 + 183433 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAACTGGCATCACAGTTTC-CTGAGCTGTCTACTT-GGGCTGATTGTAGCTCCTGAGAACTGGCCACACCCC s panTro5.chr20 66489319 97 + 66533130 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAACTGGCATCACAGTTTC-CTGAGCTGTCTACTT-GGGCTGATTGTAGCTCCTGAGAACTGGCCACACCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156789 97 + 62195757 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAACTGGCATCACAGTTTC-CTGAGCTGTCTACTT-GGGCTGATTGTAGCTCCTGAGAACTGGCCACACCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543060 97 - 578057 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAACTGGCATCACAGTTTC-CTGAGCTGTCTACTT-GGGCTGATTGTAGCTCCTGAGAACTGGCCACACCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064625 97 - 110113093 TCTGAACTCCTCGGGAGCCCCTCCCAGTAACTAGCGTCACAGTTTC-CTGAGCTGTCTACTT-GGGCTGATTGTAGCTCCTGAGAACTGGCCACACCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803703 98 - 92844088 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAGCTAGCGTCGCAGTGTCGCTGAGCTGTCTACTT-GGGCTGACTGTAGCTCCTGAGAGCTGGCCACACCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469229 98 + 96509753 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAGCTAGCGTCGCAGTGTCGCTGAGCTGTCTACTT-GGGCTGACTGTAGCTCCTGAGAGCTGGCCACACCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939285 98 - 16982598 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAGCTAGCGTCGCAGTGTCGCTGAGCTGTCTACTT-GGGCTGACTGTAGCTCCTGAGAGCTGGCCACACCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741341 98 - 3785965 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAGCTAGTGTCGCAGTGTCGCTGAGCTGTCTACTT-GGGCTGACTGTAGCTCCTGAGAGCTGGCCACACCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331755 98 - 90373283 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAGCTAGCGTCGCAGTGTCGCTGAGCTGTCTACTT-GGGCTGACTGTAGCTCCTGAGAGCTGGCCACACCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 131980 98 - 179258 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAGCTAGCGTCGCAGTGTCGCTGAGCTGTCTACTT-GGGCTGACTGTAGCTCCTGAGAGCTGGCCACACCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607459 98 - 5823884 CCTGAGCTCCTAGAGAGCCCCTCCCAGTAGCTAGTGTCACAGTGTCGCTGAGCTGTCTACTT-GGGCTGACTGTAGCTCCTGAGAGCTGGCCACTCCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 88025 95 + 372756 CCTGAGCTCCAAG-GAGACCCTCCCAGTAACTCGTGTGACAGTTTCGCTGAGTTGTCTACTT-GAGCTGATTGTAGCTCCTGAGAGCTGGCCACA--CC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16320948 91 + 16356641 CCTGAGCTCCAAG-GAGACCCTCCCAGCAACTCGTTTGAGAGTTTTGCTGAGCTGTCTACTT-GAGCTGATTGTA-----TGAGAGCTGGCCACA-GCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192074 96 + 1231380 CCTGAGCTCCAAG-GAGACCCTCCCAGCAAGTCGTGTGACAGTTTCACTGAGCTGCCTGCTT-GAGCTGACTGCAGCTCCTGAGAGCTGGCCACG-CCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723585 96 + 11732439 CCTGAGCTCCAAG-GAGACCCTCCCAGTAACTCATGTGACAGTTTCGCTGAGCTGTCTACTT-GAGCTGATTGTAGCCCCTGAGAGCTGACCACA-CCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1899787 94 - 2029793 CCTGAGCTCCAAGGGAACCCCTCCCAGTAACTGCTGTGACAGTTTGGCTGAGGTGTCTACTC-TGGCTTGTTCTAGCTCCTGAG----GGTCACACCCT i proCoq1.NW_012150197v1 I 152 C 0 s otoGar3.GL873542 22887222 98 + 22939663 TCTGAGCTTCAAGGGAAACCCTCCCAGTAACTGATGTGATGGTTTGGTTGTGGTGTCTACTC-TGGCTGGCTCTAGTGCCCAGGGGCCGGTCACTCCCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831647 95 + 182113224 CCTGAACTCCAGAGTAACCCATCCCTATAACAGATTTGATAGTCGG-TCAAGGTGTTTATTT-GTGCTGGTTTGAACTTCTGGAGGCTGGCTATACC-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47641808 76 + 47698779 --TGAACTCCAAG-GAGCTCCTCCCACCAA-----------------CTGAGAGGTCTGCCC---GCTGGTCCTGGCTCCTGAGGGTTGGCCACAGCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311902 82 - 397369 CCTGAGTTCCGCGGGAACCCCTCCCAGTGGC-GGCCTGGC-GTTTGGCCGATGTGGCTACTTTGGGCTGATTGTGGCTTCTGAG--------------- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56908938 161 + 57149010 I a score=1443395.000000 s hg38.chr20_KI270870v1_alt 153988 114 + 183433 TGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGCACATTGGGAGCCCCACGAGGTTGGAGGAAGTGGTACAGTCTCAG-CCCTGCAGAGCCATCCCTGAGCACCCACCACTCC s panTro5.chr20 66489416 114 + 66533130 TGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGCACATTGGGAGCCCCACGAGGTTGGAGGAAGTGGTACAGTCTCAG-CCCTGCAGAGCCATCCCTGAGCACCTACCACTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62156886 114 + 62195757 TGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGCACATTGGGAGCCCCACGAGGTTGGAGGAAGTGGTACGGTCTCAG-CCCTGCAGAGCCATCCCTGAGCACCTACCACTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543157 114 - 578057 TGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGCACATTGGGAGCCCCACGAGGTTGGAGGAGGTGGTACAGTCTCAG-CCCTGCAGAGCCATCCCTGAGCACCCACCACTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064722 114 - 110113093 TGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGCACATTGGGAGCCCCGTGAGGTTGGAGGAAGTGGTACAGTCTCAG-CCCTGCAGAGCCATCCCTGAGCACCCACCACTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803801 114 - 92844088 TGGCAGCCTCATGAGCCAGTGTAGGTCTTGAGGGGTTCACTGGGAGCACCATGAAGTTGAAGGATGTGGCACAGTCTCAG-CCCTGCAGAACCATCCCTGAGCACCCACCACCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469327 114 + 96509753 TGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGTTCACTGGGAGCACCATGAAGTTGAAGGATGTGGCACAGTCTCAG-CCCTGCAGAACCATCCCTGAGCACCCACCACCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939383 114 - 16982598 TGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGTTCACTGGGAGCACCATGAAGTTGAAGGATGTGGCACAGTCTCAG-CCCTGCAGAACCATCCCTGAGCACCCACCACCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741439 114 - 3785965 TGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGTTCACTGGGAGCACCATGAAGTTGGAGGATGTGGCACAGTCTCAG-CCCTGCAGAACCATCCCTGAGCACCCACCACCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331853 100 - 90373283 TGGCAGCCTTGTGAGCCAGTGTAGGGCTTGAGCGGCTCACTGGGAGCACCATGAAGTTGAAGGATGTGGCACAGTCTCAG---------------CCCTGAGCACCCACCACCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 132078 114 - 179258 TGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGTTCACTGGGAGCACCATGAAGTTGAAGGATGTGGCACAGTCTCAG-CCCTGCAGAACCATCCCTGAGCACCCACCACCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607557 114 - 5823884 AGGCAGCCTCGTGAGCCAGTGTAGGTCTTGAGGGGCTCACTGGGAGCACCATGAAGTTGAAGGATGTGGCACAGTCTCAG-CCCTGCAGAACCATCCCTGAGCAGCCACCACTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 88120 107 + 372756 TGGCAGCCTCTTGAGCCAGC----CTCTTGAGGGTCACACTGGGAGACCCATGAAGTTGGAGGCTGTGGT--AGTCTCAG-CCCTGCAGA-TCATCCCCGAGCACCCACCACTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16321039 111 + 16356641 CGGCAGTCTCTTGAGCCAGTGGAGGTCTTGAGGGACACACTGGGAGCCCCATGAAGTTGGAGGGTGTGGT--AGTCTCAG-TACTGCAGA-CCATCCCTGAGCACCCACCACTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192170 110 + 1231380 CGGCTGCCTCTTGAGCCAGTCCAGGTCTTGAGGGGCACACTGGGAG-CCCATGAAGTTGGAGGGTGTGGT--AGCCTCAG-CCCTGCAGA-GCATCCCTGGGCATCCACCGCTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723681 113 + 11732439 CGGCAGCCTCTTGAGCCAGTGGAGGTCTTGAGGGGCACACTGGGAGCCCCATGAAGTTGGTGCGTGTGGTACAGTCTCAG-CCCTGCAGA-CCATCCCTGAGCGCCCACCACTCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56909099 113 + 57149010 TGGCAGCCTCATGAGCCAGTGTAGGCAT-TAGAGGCACACCTGGAGCCCCATTTGGTTGGAGGAGGGGATACAGCCTCAG-CCCTGCAGAGCCATCCCTGAGCACCCACCTCTCC i micMur3.chr18 I 161 I 124 s proCoq1.NW_012150197v1 1899881 114 - 2029793 TGGCAGCCTCATGAGCCAGTGTAGGTACAGAGAGGCACACCTGGAGCCCCACTTAGTTGGAGGAGGGGATATGGCCTCAG-CCCTGCAGAGCCGTCCCTGAGCACCCACCTCTCC i proCoq1.NW_012150197v1 C 0 I 151 s otoGar3.GL873542 22887320 112 + 22939663 TGGCAGCCTTGTGGGCCAGGGCAGACAT-TGAGAGCTCCCCTGGAGTCCCTTTAGTTGGGAGGAGGTGGGATGATCCCAG-CCCTACGGAGCCATCCCTGAGCACCCACCTCTC- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831742 112 + 182113224 TTGTAGCCTCACAAGCCAATGCTGATCTCAAAGGTCACACCCAGAAC-CCACAAAGTTGGAGCAGGTGGT--AGTTTCACTCCCTATGGGGTCACTCCAGAACACCCACTAACAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47641884 111 + 47698779 CAGCAGCTCCTTGAGCCAGTATAGGTCAT-AGGGGCACACCCGGAGCCCCACAGAATTAGAGGGACCGGTACAGTCTCAG-CCCTGTGGGGCCATCCCCGAGC--CTGCCACTTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 311984 66 - 397369 -GGCAG----------------------TGGGGGGACCACTAGAG--CCCATCAA--CAGAGGCAG-GGTGTGGTCTCCG--------------------AGCCACCAGCACTA- i dasNov3.JH569290 C 0 C 0 a score=1606152.000000 s hg38.chr20_KI270870v1_alt 154102 175 + 183433 CACGGTGAGAAACCTTGC--TGGGGGGGCAG--GGGGTGCCTGTGAAGCCTTGTCCCCTGACCC-ACAGGAGCCCAGGGGCAGGAGGGTGAGCAGCAAACTGCAG----------------------------CCACCACTCCAGCACCC---AGCGAAC-----CCTCTTCATGGGACCC-ATTCATCTCTGCTCATGGGGCACCTTTTGCCAAAT s panTro5.chr20 66489530 175 + 66533130 CACGGTGAGAAACCTTGC--TGGGGGGGCAG--GGGGTGCCTGTGAAGCCTTGTCCCCTGACCC-ACAGGAGCCCAGGGGCAGGAGGGTGAGCAGCAAACTGCAG----------------------------CCACCACTCCAGCACCC---AGGGAAC-----CCTCTTCATGGGACCC-ATTCATCTCTGCTCATGAGGCACCTTTTGCCAAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157000 175 + 62195757 CACGGTGAGAAACCTTGC--TGGGGGGGCAG--GGGGTGCCTGTGAAGCCTTGTCCCCTGACCC-ACAGGAGCCCAGGGGCAGGAGGGTGAGCAGCAAACTGCAG----------------------------CCACCACTCCAGCACCC---AGGGAAC-----CCTCTTCATGGGACCC-ATTCATCTCTGCTCATGAGGCACCTTTTGCCAAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543271 175 - 578057 CACGGTGAGAAACCTTGC--TGGGGGAGCAG--GGGGTGCCTGTGAAGCCTTGTCCCCTGACCC-ACAGGAGCCCAGGGGCAGGAGGGTGAGCAGCAAACTGCAG----------------------------CCACCACTCCAGCACCC---AGCGAAC-----CTTCTTCATGGGACCC-ATTCATCTCTGCTTATGGGGCACCTTTTGCCAAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110064836 175 - 110113093 TAGGGTGAGAAACCTTGC--CGGGGGGGCAG--GGGGTGCCTGTGAAGCCTTGTCCCCCAACCC-ACAGGAGCCCAGGAGCAGGAGGGTGAGCAGCAAACTGCAG----------------------------CCACCACTGCAGCACCC---GGCGAAC-----CCTCTTCATGGGACCC-ATTCATTTCTGCTCATGGGGCACCTTTTGCCAAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92803915 173 - 92844088 CAGGATGAGAAACCTTGC--TGGAGGGG-AA--GGGGTGCCTGTGAAGCCTTGCCACCC-CCCC-ACAGGAGCCCAGGAGCAGGAGGTTGAGCAGCAAACTGCAG----------------------------CCACCACTCCAGCACCC---AGCGAAC-----CCTCTTCATGGGGCAC-ATTCATCTCTGCTCATGGGGCACCTTTTGCCAAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469441 173 + 96509753 CAGGATGAGAAACCTTGC--TGGAGGGG-AA--GGGGTGCCTGTGAAGCCTTGCCACCC-CCCC-ACAGGAGCCCAGGAGCAGGAGGTTGAGCAGCAAACTGCAG----------------------------CCACCACTCCAGCACCC---AGCGAAC-----CCTCTTCATGGGGCAC-ATTCATCTCTGCTCATGGGGCACCTTTTGCCAAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939497 173 - 16982598 CAGGATGAGAAACCTTGC--TGGAGGGG-AA--GGGGTGCCTGTGAAGCCTTGCCACCC-CCCC-ACAGGAGCCCAGGAGCAGGAGGTTGAGCAGCAAACTGCAG----------------------------CCACCACTCCAGCACCC---AGCGAAC-----CCTCTTCATGGGGCAC-ATTCATCTCTGCTCATGGGGCACCTTTTGCCAAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741553 173 - 3785965 CAGGATGAGAAACCTTGC--TGGAGGGG-AA--GGGGTGCCTGTGAAGCCTTGCCACCC-CCCC-ACAGGAGCCCAGGAGCAGGAGGTTGAGCAGCAAACCGCAG----------------------------CCACCACTCCAGCACCC---AGCGAAC-----CCTCTTCATAGGGCAC-ATTCATCTCTGCTCATGGGGCACCTTTTGCCAAAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90331953 171 - 90373283 CAGGATGAGAAACCTTGC--TGGAGGGG-AA---GGGTGCCTGTGAAGCCTTGCCACCC-CCC--ACAGGAGCCCAGGAGCAGGAGGCTGAGCAGCAAACCGCAG----------------------------CCACCACTCCAGCACCC---AGCGGAC-----CCTCTTCATGGGGCGC-ATTCATCTCTGCTCATGGGGCAGCTTTTGCCAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 132192 173 - 179258 CAGGATGAGAAACCTTGC--TGGAGGGG-AA--GGGGTGCCTGTGAAGCCTTGCCACCC-CCCA-ACAGGAGCCCAGGAGCAGGAGGTTGAGCAGCAAACCGCAG----------------------------CCACCACTCCAGCACCC---AGCGAAC-----CCTCTTCATAGGGCAC-ATTCATCTCTGCTCATGGGGCACCGTTTGCCAAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607671 174 - 5823884 CAGGGTGAGAAACCTTGC--TGGAGGGG-AA--GGGGTGCCTGTGAAGCCTTGCCACCT-CCCCTACAGGAGCCCAGGAGCAGGAGGTTGAGCAGCAAACCGCAG----------------------------CCACCACTCCAGCACCC---AGCGAAC-----CCTCTTCATGGGGCAC-ATTCGTCTCTGCTCATGGGGCACCTTTTGCCAAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 88227 165 + 372756 -AGGGTGAGAAACCTTGC--TGGAGGGGTAG--AGGGTGCATGTGAAG-----CCGCCC----T-CCACCAGCATGGGAGCAGGAGGTTGAGCAGGAAACTGCAG----------------------------CCAGCACTCCAGCACCC---AGTGAAC-----ACTCCTCATGGGAGCC-ATTCGTCTCTGCTCATGGGGCACCTTTGGCCAAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16321150 169 + 16356641 -AGGGTGAGAAACCTTGC--TGGAGGGGTAG--A-GGTGCCTGTGAAGTCTCACCGCCC----C-CCACCAGCATGGGAGCAGGAGGCTGAGCAGGAAACTGCAG----------------------------CCACCACCCCAGCACCC---AGTGAGT-----ACCCCTCATGGGAACC-GTTCATCTCTGCTCAGGAGGCACCTTTTGCCAAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192280 168 + 1231380 -AGGGTGAGAGACCTTGC--TGGA-GGGTAG--GGGGTATGTGTGAAGCCTCGCCGCCC------CCACCAGCATGGGAGCAGGAGGTTGAGCAGGACACGGCAG----------------------------CCACCACTCCAGCACCC---AGTGAGC-----ACTCCTCATGGGAACC-ATTCATCTCCGCTCATGAGGCACCTTTTGCCAAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723794 191 + 11732439 -AGGGTGAGAAGCCTTGC--CGGAGGGGCAG--GGGGTGCATGTGAAGCCTTGCCGCCC------CCACCGGCGTGGGAGCAGGAGGTTGAGCAGGAAACTGCAGCAGCCAGTGGGTGTGGAGGGCATCCTGACCACCACGCCAGCACGC---AGTGAAC-----ACTGCTCATGGGACCC-GTTCATCTCTGCCCATGAGGCACCTTTTG------ i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22887432 145 + 22939663 CAGGGTGAGAGACTCTGC--AGGAGGGC-AA--GAGGAGTCCGTGCAGCCTTG---CTT------CCATGGGCCCAGGAGCAGGGG--TGGGGAGCAAAGTGCAG----------------------------CTGCCTTCCCAGCACT-----GCTGAG-----CATCCTCACAGG-------------CCACTCCTG-----TCTTCTGCTAAAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181831854 174 + 182113224 CAAGATGAGAGGCCTTGTAGTGGCAGTG-GA--ATGGGGCACAGGCAGCTTTGCTTTCC----T-ACAGGAGTCCAGAGAAGAAAGAGTGAGCAGGACAGTGACT----------------------------CCACATCCCCAGCATCTGCAAGTGACT-----GTCCCTCACTGGACCA-ACCCATCTCTGCTCCAGGAGTACCTTCTGCTAAT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47641995 175 + 47698779 CAGGATGCGGGGCTGAGG--GGCAGGGG-AGCAGGGAAGCCCACAGAGCAACACTGCTT--CCC-GCATGGGATCTGGGG--AGTGGATGCTGAGGCAAGTACAG----------------------------CT-CCTCCCCAGCATCC---TGCCAGCCAACACCCCCTCACTGGACCC--CCCATCTCTGCTCACAGGGTACCTTCTGCCAAAT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 312050 138 - 397369 ---------------TGC--TGTGGGAA-AG--GGG---CCCCCACAGACCTGCCCCCT---GT-GCAGGAGCT----GGAAGCACGTCGAG-AGGCACCTGTGG----------------------------CCCCTGCACCTCCGCCT----GCAATT-----TCTCCTCATTGGGCCAAACACAACATTGCT----------CTCCTGCTAAAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1899995 151 - 2029793 I e micMur3.chr18 56909212 124 + 57149010 I a score=2066258.000000 s hg38.chr20_KI270870v1_alt 154277 140 + 183433 TAGACACACTTTTGCCTATTTATTTCATACACTGTCAAAAGTGTTTTCCTTGTCTTTAATTCGGTCACAGCTCTCTCTGTAGAAGTTGTCAAAAT-AGCAGAAGTCAAATCTGGTAATATTTATGACTAAAGATGGCGAGG s panTro5.chr20 66489705 140 + 66533130 TAGACACACTTTTGCCTATTTATTTCATACACTGTCAAAAGTGTTTTCCTTGTCTTTAATTCGGTCACAGCTCTCTCTGTAGAAGTTGTCAAAAT-AGCAGAAGTCAAATCTGGTAATATTTATGACTAAAGATGGTGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157175 140 + 62195757 TAGACACACTTTCGCCTATTTATTTCATACACTGTCAAAAGTGTTTTCCTTGTCTTTAATTCGGTCACAGCTCTCTCTGTAGAAGTTGTCAAAAT-AGCAGAAGTCAAATCTGGTAATATTTATGACTAAAGATGGCGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543446 140 - 578057 TAGACACACTTTTGCCTATTTATTTCATACACTGTCAAAAGTGTTTTCCTTGTCTTTAATTCGGTCACAGCTCTCTCTGTAGAAGTTGTCAAAAT-AGCAGAAGTCAAATCTGGTAAAATTTATGACTAAAGATGGTGAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065011 139 - 110113093 TAGACACACTTTTGCCTGTTTATTTCATACACTGTCAAAAGTGTTTTCCTTGTCTTTAATTCGGTCACAGCTCTCTCTGTAGAAGTTGTCAAAAT-AGCAGAAGTCAAA-CCGGTAATGTTTATGACTAAAGATGGTGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92804088 140 - 92844088 TAGACACACCTTTGCCTGTTGATTTCACTCACTGTCAAAAGTGTTTTCCTTGTGTTTAATCCTGTCACCGCTCTCTCTGTAGAAGTTGTCGAAAT-AGCAGAAGTCAGACCTGGTAACGTTTATGGCTAAAGATGGTGAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469614 140 + 96509753 TAGACACACCTTTGCCTGTTGATTTCACTCACTGTCAAAAGTGTTTTCCTTGTGTTTAATCCTGTCACCGCTCTCTCTGTAGAAGTTGTCGAAAT-AGCAGAAGTCAGACCTGGTAACGTTTATGGCTAAAGATGGTGAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939670 140 - 16982598 TAGACACACCTTTGCCTGTTGATTTCACTCACTGTCAAAAGTGTTTTCCTTGTGTTTAATCCTGTCACCGCTCTCTCTGTAGAAGTTGTCAAAAT-AGCAGAAGTCAGACCTGGTAACGTTTATGGCTAAAGATGGTGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741726 140 - 3785965 TAGACACACCTTTGCCTGTTGATTTCACTCACTGTCAAAAGTGTTTTCCTTGTGTTTAATCCTGTCACCGCTCTCTCTGTAGAAGTTGTCAGAAT-AGCAGAAGTCAGACCTGGTAACGTTTATGGCTAAAGATGGCGAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332124 140 - 90373283 GAGACACACCTTTGCCTGTTGATTTCACTCACTGCCAAAAGTGTTTTCCTTGTCTTTAATCCTGTCACCGCTCTCTCTGTAGAAGTTGTCAAAAT-AGCAGAAGTCAGACCTGGTAACGTTTATGGCTAAAGCTGGTGAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 132365 140 - 179258 TAGACACACCTTTGCCTGTTGATTTCACTCACTGTCAAAAGTGTTTTCCTTGTGTTTAATCCTGTCACCGCTCTGTCTGTAGAAGTTGTCAAAAT-AGCAGAAGTCAGACCTGGTAACGTTTATGGCTAAAGATGGTGAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607845 140 - 5823884 TAGACACACCCTTGCCTGTTGATTTCACTCACTGTCAAAAGTGTTTTCCTTGTCTTTAATCCTGTCACAGCTCTCTCTGTAGAAGTTGTCAAAAT-AGCAGAAGTCAAACCTGGTAATGTTTATGACTAAAGATGGTGAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 88392 141 + 372756 TAGACACACTTTTGCCTATTTATTTCACACACTGTCAAAAGTGTTTTCCTTGTCTTTTATTCTGTCACAGCTCTCTCTGTAGAAGTTGTCAAAATAAGCAGAAGACAAACCTGGTAAGGTTTATGACTAAAGATGGTGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16321319 140 + 16356641 TAGACACACTTTTGCCTATTTATTTCACACACTGTCAAAAGTGTTTTCCTTTTCTTTTATTCTGTCACCGCTCTCTCTGTAGAAGTTGTCAAAAT-AGCAGAAGACAAACCTGGTAAGGTTTATGACTAAAGTTGGTGAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192448 137 + 1231380 TAGACATGCTTTTGCCTATTTATTTCGAACACTGTCAGAAGTGTTTTCCTTGTCTTTTATTCTGTCACAGCTCTCTCTGTAGAA---GTCAAAAT-AGCAGAAGACAAACCTGGTAAGGTTTATGACTAAAGATGGTGAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2723985 110 + 11732439 ---------------CTATTTATTTCACACACTGTCAGAAGTGTTTTCCTTG-CTTTTATTCTGTCAGAGC-----------AAGTTGTCAAAAT----AGAAGACAAACCTGGTGAGGGTCATGACTCACGATGGTGAGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56909336 140 + 57149010 TAGACACACTTTGGCCTGTTTCTTTCACACACTGTCAAAAGTGCTCTTCTTATCTTTAGTGCTTCCACAGCTCATTCTGTAGAAGTTGTCAAAAT-AGCAAAAGACAAACTTGGTAACATTTATGACTAAAGATGGCGAGG i micMur3.chr18 I 124 C 0 s proCoq1.NW_012150197v1 1900146 140 - 2029793 TAGACACACTTGTGCCTGTTTCTTTCGCACACTGTCAAGAGTGTTTTTCTTATCTTTGATGCTGTCACAGCTCACTCTGTAGATGTTGTCAAAAT-AGCAAAAGACAAACTTGATAATATTTAGGACTAAAGATGGTGAGG i proCoq1.NW_012150197v1 I 151 I 120 s otoGar3.GL873542 22887577 137 + 22939663 TAGACACACTTTCACCTGTTTCTTTCACACATTGTCAAAAGTGTTTTTCTTGTCTTTAATGCCGTCAGAGCTCTCTCTGT--AAGTTGTCAAAAT-AGCAAAAGACAAACCTGGGTATGTTTATGACTAAAGATGGTAGA- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832028 134 + 182113224 CACTCACACTATTACTTGTTTCCTTCATATCCTGTCAAATATGTTTTTCTTATTTTTAGCTCTGCCATAGCTC--TTTATAGAAGTTT---AGAC-AGAAAAAGATA-ATATGAGAATGTTTAGGACAGAAGATTGTGAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47642170 140 + 47698779 TGGACACGTGTCTGCCCCTGTCTTTCACACACTGTCAAAAATGTTTTCCTCGTGTTTCATTCTGTCGTGGGTCTCTCTGTAGAAGTTGTCAAAAC-AGCAAAGGGGAAACCTGGTGCTGTTTAGGACTAAAGCCGGCAAGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 312188 119 - 397369 TAGGCAAA---------------------TATTGCCAAAAATGTCTGCCTTGTCTTAAATTTTGTCCGAGCTCTTTCTGTAGAAGTTGTCAAAAT-AGCAGAGGGCAAACCTGCTAGCGGTTATGACTGAAGGTGGTAAGG i dasNov3.JH569290 C 0 C 0 a score=1056523.000000 s hg38.chr20_KI270870v1_alt 154417 92 + 183433 AGCCATGTGAGAACCAA-CCTGCTGCCTAGGAAAGACCAACGAGAAGTGCT-GCGGGTTCCACCCCATAT-CCCCTGGG----------------CCACTGCTTGGGACCC s panTro5.chr20 66489845 92 + 66533130 AGCCATGTGGGAACCAA-CCTGCTGCCTAGGAAAGACCAACGAGAAGTGCT-GCGGGTTCCACCCCATAT-CCCCTGGG----------------CCACTGCTTGGGACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157315 92 + 62195757 AGCCATGTGGGAACCAA-CCTGCTGCCTAGGAAAGACCAACGAGAAGTGCT-GCGGGTTCCACCCCATAT-CCCCTGGG----------------CCACTGCTTGGGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543586 92 - 578057 AGCCATGTGAGAACCAA-CCTGCTGCTTAGGAAAGACCAACTAGAAGTGCT-GCGGGTTCTACCCCATAT-CCCCTGGG----------------CCACTGCTTGGGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065150 93 - 110113093 AGCCATGTGAGAACCAA-CCTGCTGCCTAGGAAAGACCAAGCAGAAGTGCT-GCGGGTTCCACCCCATATCCCCCTGGG----------------CCACTGCTTGGGACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92804228 94 - 92844088 AGCCATGTGAGAACCAGCCCTGCTGCCTAGGAAAGACCAACCGGAAGTGCT-ACAGGTTCCACCCCATATCCCCCTGGG----------------CCACTGCTTGGGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469754 94 + 96509753 AGCCATGTGAGAACCAGCCCTGCTGCCTAGGAAAGACCAACCGGAAGTGCT-ACAGGTTCCACCCCATATCCCCCTGGG----------------CCACTGCTTGGGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939810 94 - 16982598 AGCCATGTGAGAACCAGCCCTGCTGCCTAGGAAAGACCAACCGGAAGTGCT-ACAGGTTCCACCCCGTATCCCCCTGGG----------------CCACTGCTTGGGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741866 94 - 3785965 AGCCATGTGAGAACCAGCCCTGCTGCCTAGGAAAGACCAACCGGAAGTGCT-ACAGGTTCCACCCCGTATCCCCCTGGG----------------CCACTGCTTGGGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332264 94 - 90373283 AGCCATGTGAGAACCAGCCCTGCTGCCTAGGAAAGACCAACCGGAAGTGCT-ACAGGTTCCACCCTGTATCCCCCTGGG----------------CCACTGCTTGGGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 132505 94 - 179258 AGCCATGTGAGAACCAGCCCTGCTGCCTAGGAAAGACCAACCGGAAGTGCT-ACAGGTTCCACCCCGTATCCCCCTGGA----------------CCACTGCTTGGGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5607985 93 - 5823884 AGCCATGTGAGAACCCG-CCTGCTGCCTAGGAAAGACCAACCAGAAGTGCT-ACAGGTTCCACCCCGTATCCCCCTGGG----------------CCACTGCTTGGGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 88533 93 + 372756 AGCCATGTGAGAACCAA-CCTGCTGCCTAGAAAAGACCAACCAGAAGTGCT-GCAGGTTCTACCCTGTATCCCCTTGGG----------------CCACTGCTTGGGACCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16321459 93 + 16356641 AGCCATGTGAGAACCAA-CCTGCTGCCTAGGAAAGATCAACTAGAAGTGCT-GCAGGTTCCACCCCGTATCCCCCTGGG----------------CCGCTGCTTGGGACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192585 93 + 1231380 AGCCATGTGAGAACCAG-CCTGCTGCCTAGAAAAGACCAGCCAGAAGTGCT-GCAGGTTCCACCCCGTAACCCCCTGGG----------------CCACTGCTTGGGACCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724095 90 + 11732439 AGCCGTGTGAGAACCAA-CCTGCCGCCTAG-AAATAGCAACCAG-AGTGCT-GTGGGTTCCACCCCGTGTCCCCTCGGG----------------CCACTGCTTGGGA-CC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56909476 88 + 57149010 GGCTATCCAAGACCCAC-ACTGCTGCCTCATAAAGACCAAGCAGAAGTGTT----GGTTTCACCCCATCT--CCCTGGG----------------CCACTGCTTGGGACCC i micMur3.chr18 C 0 I 557 s otoGar3.GL873542 22887714 90 + 22939663 GGCTCTCTAAGACCCAC-CCTGCTGCCT-GTAACGACCAAGCAGAAGTGTTTGTAAGTTTCACCGTATC---CCCTAGG----------------CCACTGCTTTGAACCC i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181832162 69 + 182113224 ---------AGAAATAA----------------AGACCAAGCAGAAGTGCTGGAAAGTTCCATGTGAGAC-CTTCAGCC----------------CCACTCTTTGGTATCC i mm10.chr2 C 0 C 0 s canFam3.chr24 47642310 107 + 47698779 AGTCCGCCCAGGCCCA--CCTGCTGTGCTGTGAAGACCCCGCAGAAGCGCT-CTAAGTCCCACCTGCTGCCCCCCTGCTCTGCCCCCCCGCCCCCCTGCTGCCCGGGCCC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 312307 77 - 397369 AGCTCCTCCAGGGCGTG-CCTGCCACGTCACGAAGACCAAGCAGAGGTGCT-GCTG----------------CCCTCAG----------------CTCAAGCTGGGGACCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1900286 120 - 2029793 I a score=209420.000000 s hg38.chr20_KI270870v1_alt 154509 23 + 183433 CTGATGGGTGGATAATCTCAGAA s panTro5.chr20 66489937 23 + 66533130 CTGATGGGTGGATAATCTCAGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157407 23 + 62195757 CTGATGGGTGGATAATCTCAGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543678 23 - 578057 CTGATGGGTGGATAATCTCAGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065243 23 - 110113093 CTGATGGGTGGATAATCTCAGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92804322 23 - 92844088 CTGGGGGGTGGATAATCTCAGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469848 23 + 96509753 CTGGGGGGTGGATAATCTCAGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939904 23 - 16982598 CTGGGGGGTGGATAATCTCAGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741960 23 - 3785965 CTGAGGGGTGGATAATCTCAGAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332358 23 - 90373283 CTGGGGGGTGGATAATCTCAGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 132599 23 - 179258 CTGGGGGGTGGATAATCTCAGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5608078 22 - 5823884 C-GGTGGGTGGATAATCTCAGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 88626 23 + 372756 CTGATAGGTGGGTCATCTCAGAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16321552 23 + 16356641 CTGATGGGTGGGTAATCTCAGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192678 23 + 1231380 CTGATGGGTGGGTAATCTCAGAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724185 23 + 11732439 CTGATGGGTGGGTAATCTCAGAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22887807 23 + 22939663 ACCACAGGTTGGTAATTGGAGAC i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181832231 6 + 182113224 -----------GTAATC------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47642417 19 + 47698779 ----TGAGCAGAGGATCTGAGAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 312384 5 - 397369 ------------------CAGAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1900286 120 - 2029793 I e micMur3.chr18 56909564 557 + 57149010 I a score=181481.000000 s hg38.chr20_KI270870v1_alt 154532 12 + 183433 CCCATCAGGCAC s panTro5.chr20 66489960 12 + 66533130 CCCATCAGGCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157430 12 + 62195757 CCCATCAGGCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543701 12 - 578057 CCCATCAGGCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065266 12 - 110113093 CCCATCAGGCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92804345 12 - 92844088 CACATCAGGCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96469871 12 + 96509753 CACATCAGGCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16939927 12 - 16982598 CACATCAGGCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3741983 12 - 3785965 CCCATCAGGCAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332381 12 - 90373283 CCCATCAGGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 132622 12 - 179258 CCCATCAGGCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5608100 12 - 5823884 CCCATCAGGCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 88649 12 + 372756 CCCATCAGGCAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16321575 12 + 16356641 CCCATCAGGCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192701 12 + 1231380 CCCATCAGGCAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724208 12 + 11732439 CCCATCAGGCAC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1900406 12 - 2029793 CCCATCAGGCAC i proCoq1.NW_012150197v1 I 120 C 0 s otoGar3.GL873542 22887830 12 + 22939663 CCCTTCAGGCAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832237 12 + 182113224 CCCTTTAGGCAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47642436 12 + 47698779 CCCAGGCGGCAC i canFam3.chr24 C 0 I 1442 e micMur3.chr18 56909564 557 + 57149010 I e dasNov3.JH569290 312389 0 - 397369 C a score=1031149.000000 s hg38.chr20_KI270870v1_alt 154544 99 + 183433 CAAATCTAGAAGGGTTCCATTATGGCTGCCCTAACTCCCACCCCACATAGAAGT--------CCTACTTGGCTCAGCTCTGAGCAGATA-AGGAGAAATAA--AGACTGA s panTro5.chr20 66489972 99 + 66533130 CAAATCTAGAAGGGTTCCATTATGGCTGCCCTAACTCCCACCCCACATAGAAGT--------CCTACTTGGCTCAGCTCTGAGCAGATA-AGGAGAAATAA--AGACTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157442 99 + 62195757 CAAATCTAGAAGGGTTCCATTATGGCTGCCCTAACTCCCACCCCACATAGAAGT--------CCTACTTGGCTCAGCTCTGAGCAGATA-AGGAGAAATAA--AGACTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543713 99 - 578057 CAAATCTAGAAGGGTTCCATTATGGCTGCCCTAACTCCCACCCCACATAGAAGT--------CCTACTTGGCTCAGCTCTGAGCAGATA-AGGAGAAATAA--AGACTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065278 99 - 110113093 CAAATCTAGAAGGGCTCCATTATGGCTGCCCTAACTCCCACCCCACATAGAAGT--------CCTACTTGGCTCAGCTCTGAGCAGAGA-AGGAGAAATAA--AGACTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92804357 98 - 92844088 CAAATCTAGAAGGGCTCCATGATGACTGCCCTAACTCCCACCCCATGTAGAAGG--------CCTACTTGGCTCAGCTCTGAGCACATA-AGGAGAAA-AA--AGACTGA i rheMac8.chr10 C 0 I 318 s macFas5.chr10 96469883 98 + 96509753 CAAATCTAGAAGGGCTCCATGATGACTGCCCTAACTCCCACCCCATGTAGAAGG--------CCTACTTGGCTCAGCTCTGAGCACATA-AGGAGAAA-AA--AGACTGA i macFas5.chr10 C 0 I 318 s macNem1.NW_012014244v1 16939939 98 - 16982598 CAAATCTAGAAGGGCTCCATGATGACTGCCCTAACTCCCACCCCATGTAGAAGG--------CCTACTTGGCTCAGCTCTGAGCACATA-AGGAGAAA-AA--AGACTGA i macNem1.NW_012014244v1 C 0 I 318 s cerAty1.NW_012001373v1 3741995 98 - 3785965 CAAATCTAGAAGGGCTCCATGATGACTGCCCTAACTCCCACCCCATGTAGAAGG--------CCTACTTGGCTCAGCTCTGAGCAGATA-AGGAGAAA-AA--AGACTGA i cerAty1.NW_012001373v1 C 0 I 318 s chlSab2.chr2 90332393 98 - 90373283 CAAATCTAGAAGGGCTCCATGATGGCTGCCCTAACTCCCACCCTGCATAGAAGC--------CCTACTTGGCTCAGCTCTGAGTAGATA-AGGAGAAA-AA--AGACTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 132634 98 - 179258 CAAATCTAGAAGGGCTCCATGATGACTGCCCTAACTCCCACCCCATGTAGAAGG--------CCTGCTTGGCTCAGCTCTGAGCAGATA-AGGAGAAA-AA--AGACTGA i manLeu1.NW_012101652v1 C 0 I 320 s colAng1.NW_012114444v1 5608112 98 - 5823884 CAAATCTAGAAGGGCTCCATGATGGCTGCCCTAACTCCCACCCCACATAGAAGC--------CCTACTTGGCTCAGCTGTGAGCGGATA-AGGAGAAA-AA--AGACTGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 88661 99 + 372756 CAAATGTATAAGGGCTCCATTATGGCTTCCCTAACTCCCATCCCACGCAGAAGC--------CCTCCTTGGCTCAGGTATGAGCAGTTA-AGGAGAAATAA--AGACTGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16321587 99 + 16356641 CAAATGTATAAGGGCTCCATTATGGCTACCCTAGCTCCCACCCCACACAGAAGC--------CCTACTTGGTTCAGCTATGAGCAGTTA-AGGACAAATAA--AGACTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192713 99 + 1231380 CAAATGTATAAGGGCTCGATTATGGTTGCCCTAGCCCCCACCCCACGCAGAAGC--------CCTAGTTGGCTCAGCTGTGAGCAGGGA-AGGAGAAATAA--AGACTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724220 99 + 11732439 CAAATGTATGAGGGCTCCATTATGGCCGCCCTAACTCCCACCCCACGCAGAAGC--------CCTACGTGGCTCAGCCATGAGCAGTTG-AGGAGAAATAA--AGACTGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1900418 102 - 2029793 CAAACTCAGAAGGGCTCCGTTATGGCAGCCCCGATTCCCACCTCACACAGAAGC--------CCTCCCTGGCTCAGGTCTGAGCAGGTGCAGGAGACAGACAaacactga i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22887842 98 + 22939663 TAAACTCAGAA-GGTTTGATTACCCCTGGCCCAGGTCCCACTTCACACAG-AGT--------CCTACCTGGCTCAGCTTTGAGCAGGCATAGGAGAATACC--ACACTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832249 43 + 182113224 CAAACTTC---------------------------------------------------------------TTCAGTCCTGAGTAGG-A-AGGAGTAATAT--AGAAAGa i mm10.chr2 C 0 C 0 s dasNov3.JH569290 312389 101 - 397369 ----CCCAGAAGGGCTTCGGCATGGCCACTCCAAGTCTTCCCGTGGACAGGAGCCTGTGGGACCTGCTCTGCCTGGGGCTGCGTGGGCT-ATAGGAGC-AA--AACCAG- i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e micMur3.chr18 56909564 557 + 57149010 I a score=1361407.000000 s hg38.chr20_KI270870v1_alt 154643 122 + 183433 CCATTATTGAATCTTAT------C----CCTTtctacacatttgggctccttccacctctcaaccacctgtgatacaagcaataggattgtccccatca-tgcagatgaagaaaccaaggcccagggaggccc s panTro5.chr20 66490071 122 + 66533130 CCATTATTGAATCTTAT------C----CCTTtctacacatttggactccttccacctctcaaccacctgtgatacaagcaataggattgtccccatca-tgcagatgaagaaaccaaggcccagggaggccc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157541 122 + 62195757 CCATTATTGAATCTTAT------C----CCTTtctacacatttggactccttccacctctcaaccacctgtgatacaagcaataggattgtccccatca-tgcagatgaagaaaccaaggcccagggaggccc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543812 122 - 578057 CCATTATTGAATCTTAT------C----CCTTtctacacatttgggctccttccacctctcaaccacctgtgatacaagcaataggattgtccccatca-tgcagatgaagaaaccaaggcccagggaggccc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065377 122 - 110113093 CCATTATTGAATCTTAT------C----CCTTtctacacatttgggctccttccacctctcagccacctgtgatacaagcaataggattgtcctcatca-agcagatgaagaaaccaaggcccagcgaggccc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92804773 123 - 92844088 CCATTGTTGAATCTTAT------C----CCTTtctacatatatgggctctttccacctctcagccacctgtgatacaggcaataggactgtccccatcattgcaagtgaaggaaccaaggcccagggaggccc i rheMac8.chr10 I 318 C 0 s macFas5.chr10 96470299 123 + 96509753 CCATTGTTGAATCTTAT------C----CCTTtctacacatatgggctccttccacctctcagccacctgtgatacaggcaataggactgtccccatcattgcaagtgaaggaaccaaggcccagggaggccc i macFas5.chr10 I 318 C 0 s macNem1.NW_012014244v1 16940355 123 - 16982598 CCATTGTTGAATCTTAT------C----CCTTtctacacatatgggctccttccacctctcagccacctgtgatacaggcaataggactgtccccatcattgcaggtgaaggaaccaaggcccagggaggctc i macNem1.NW_012014244v1 I 318 C 0 s cerAty1.NW_012001373v1 3742411 123 - 3785965 CCATTGTTGAATCTTAT------C----CCTTtctacacatatgggctccttccacctctcagccacctgtgatacaggcaataggactgtccccatcattgcaggtgaaggaaccaaggcccagggaggccc i cerAty1.NW_012001373v1 I 318 C 0 s chlSab2.chr2 90332491 123 - 90373283 CCATTGTTGCATCTTAC------C----CCTTtctacacatatgggctccttccacctctcagccacctgtgatacaggcaataggactgtccccatcattgcaggggaaggaaccaaggcccagggaggccc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133052 123 - 179258 CCATTGTTGAATCTTAT------C----CCTTtctacacatatgggctccttccacctctcagccacctgtgatacagacaataggactgtccccatcattgcaggtgaaggaaccaaggcccagggaggccc i manLeu1.NW_012101652v1 I 320 C 0 s colAng1.NW_012114444v1 5608210 123 - 5823884 CCATTGTTGAATCTTAT------C----Cctttctacacatatgggctccttccacctctcagccaactgtgatataggcaataggactgtccccatcattgcagatgaaggaaccaaaggccagggaggccc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 88760 121 + 372756 CCATTATTGAATCTTAT------C----CCTTtctacacatatgggctccttcttcctctcaaccacctgtgatacaggcaataggattg-ccccatca-tgcagatgaagaaaccaaggccctgggaggccc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16321686 121 + 16356641 CCATTATTGAATCTTAC------T----CCTTtctacatatatgggctccttcctcctctcaaccacctgtgatacaggcaataggattg-ccgcatca-tgcagatgaagaaaccaaggcccagggaggccc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1192812 121 + 1231380 CCATTATTGAACCTTAT------C----CCTTtctacgtatgtgggctccttcctcctctcaaccacctgtgatgcaggcaataggattg-ccgcatta-tgcaggtgaagaaaccaaggcccagggaggccc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724319 120 + 11732439 CCATTATTGAATCTTAT------C----CCTTtctacatatatgggctctttcctcctctc-accacctgtgatacaggctataggattg-ccccatca-tgcagatgaagaaaccaaggcccagggcggccc i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1900520 128 - 2029793 cagttactgagtctaatcctgagc----cctttttagatgcatgggctccttccaactctcaaccacctgtgaggcaggtagtaggattgtccccatcg-tatggatgatgaaaccaaggcccacggaggccc i proCoq1.NW_012150197v1 C 0 I 313 s otoGar3.GL873542 22887940 107 + 22939663 CAGTTACTGAGCCTAATCTTGAGC----CCTTTTTATACTTACAGGTGCTTTCTGCCACTTAGCCATCTGTA---------------------CCATCA-TATAGATGATGAAACCAAGGCCCAAGGAGGTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832292 106 + 182113224 --------cagtctgaa------cagagcccttttacctgcacaggctcctgccacttctcaactacttgtgacatagagagtgaggttg-tcccatt--tacagatggggaaactgaggccc---------- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 312490 72 - 397369 -----------------------C----CCT-----AATAGCTAAGCACATCCAG------AGCCAGCGCAGGTCCGAGGACCAGGGC------------AGGAAATGGAGGA-----------TGGAGACGC i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e micMur3.chr18 56909564 557 + 57149010 I a score=2276838.000000 s hg38.chr20_KI270870v1_alt 154765 242 + 183433 agaaggccactcagagtcacacagggcttggctgtgcagccggggtttgcc-gcaggcccctgactccagagctggcgccttcggaaccacATGATGGTG---TCTGCAG--CATATTCAGG------------------AGGAGAAGAG-----------------CGGATCTGCACAGAGCAGTAGGATCCAGTGGGTATC--CAAGGGGCCAGAGGAGA-AGGGGCTGCTGTGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCACCAGGAAGAATCTGCCT--GG s panTro5.chr20 66490193 242 + 66533130 agaaggccgctcagagtcacacagggcttggctgtgcagccagggtttgcc-gcaggcccctgactccagagctggcgccttcggaaccacATGATGGTG---TCTGCAG--CATATTTGGG------------------AGGAGAAGAG-----------------CGGATCTGCACAGAGCAGTAGGATCCAGTGGGTATC--CAAGGGGCCAGAGGAGA-AGGGGCTGCTGTGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCACCAGGAAGAATCTGCCT--GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157663 242 + 62195757 agaaggccgctcagagtcacacagggcttggctgtgcagccagggtttgcc-gcaggcccctgactccagagctggcgccttcggaaccacATGATGGTG---TCTGCAG--CATATTTGGG------------------AGGAGAAGAG-----------------CGGATCTGCACAGAGCAGTAGGATCCAGTGGGTATC--CAAGGGGCCAGAGGAGA-AGGGGCTGCTGTGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCACCAGGAAGAATCTGCCT--GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 543934 242 - 578057 agaaggctgatcagagtcacacagggcttggctgtgcagccagggtttgcc-gcaggcccctgactccagagctggcgccttcggaaccacATGATGGTG---TCTGCAG--CATATTCAGG------------------AGGAGAAGAG-----------------CGGATCTGCACAGAGCAGTAGGATCCAGTGGGTATC--CAAGGGGCCAGAGGAGA-AGGGGCTGCTGTGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCACCAGGAAGAATCTGCCT--GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065499 243 - 110113093 agaaggctgctcagagtcacacagggcttggctgtgcagccagggtttgcctgcaggcccctgactccagagctggtgccttcggaaccacatgatagtg---tCTGTAG--CATATCCAGG------------------AGGAGAAGAG-----------------CAGATCCTCACAGAGCAGTAGGATCCAGTGGGTATC--CAAGGGGCCAGAGGAGA-AGGGGCTGCTGTGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCGCCAGGAAGAATCTGCCT--GG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92804896 221 - 92844088 agaaggctgctcagagccacaca--------------------gttTTGCCTGCAGGCTCCTGACTCCAGAGCTGGTGCCTTGGGAACCACATGATGGTG---TCTGTAG--CATATCCAGG------------------AGGAGAAGAG-----------------CAGATCCTCGCAGAACAGTAGGATCCAGTGGGTATC--CAAGGGGCCAAGGGAGA-AGGGGCTGCTATGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCGCCTGGAAGAATCTGCCT---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96470422 221 + 96509753 agaaggctgctcagagccacaca--------------------gGTTTGCCTGCAGGCTCCTGACTCCAGAGCTGGTGCCTTGGGAACCACATGATGGTG---TCTGTAG--CATATCCAGG------------------AGGAGAAGAG-----------------CAGATCCTCGCAGAACAGTAGGATCCAGTGGGTATC--CAAGGGGCCAAGGGAGA-AGGGGCTGCTATGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCGCCTGGAAGAATCTGCCT---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16940478 221 - 16982598 agaaggctgctcagagccacaca--------------------gGTTTGCCTGCAGGCCCCTGACTCCAGAGCTGGTGCCTTGGGAACCACATGATGGTG---TCTGTAG--CATATCCAGG------------------AGGAGAAGAG-----------------CAGATCCTCGCAGAACAGTAGGATCCAGTGGGTATC--CAAGGGGCCAAGGGAGA-AGGGGCTGCTATGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCGCCTGGAAGAATCTGCCT---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3742534 221 - 3785965 agaaggctgctcagagccacaca--------------------gGTTTGCCTGCAGGCCCCTGACTCCAGAGCTGGTGCCTTGGGAACCACATGATGGTG---TCTGTAG--CATATCCAGG------------------AGGAGAAGAG-----------------CAGATCCTCGCAGAACAGTAGGATCCAGTGGGTATC--CAAGGGGCCAAGGGAGA-AGGGGCTGCTATGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCGCCTGGAAGAATCTGCCT---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332614 215 - 90373283 agaaggctgctcagagccgcaca--------------------gGTTTGCCTGCAGGCCCCTGACTCCAGAGCTGGTGCCTTGGGAACCACATGATGGTG---TCTGTAG--------CAGG------------------AGGAGAAGAG-----------------CAGATCCTCGCAGAACAGTAGGATCCAGTGGGTATC--CAAGGGGCCAAGGGAGA-AGGGGCTGCTATGGTCCTTAGTCCAGTGGGAAGGGCAGGAGGCGCCTGGAAGAATCTGCCT---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133175 221 - 179258 agaaggctgctcagagccacaca--------------------gGTTTGCCTGCAGGCCCCTGACTCCAGAGCTGGCGCCTTGGGAACCACATGATGGTG---TCTGTAG--CATATCCAGG------------------AGGAGAAGAG-----------------CAGATCCTCGCAGAACAGTAGGATCCAGTGGGTATC--CAAGGGGCCAAGGGAGA-AGGGGCTGCTATGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCGCCTGGAAGAATCTGCCT---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5608333 223 - 5823884 agaaggctgctcagagccacaca--------------------ggtttagctgcaggcccctgactcCAGAGCTGGTGCCTTGGGAACCACATGATGGTG---TCTGTAG--CATATCCAGG------------------AGGAGAAGAG-----------------CGGATCCTCGCAGAACAGTAGGATCCAGTGGGTATC--CAAGGGGCCAGGGGAGA-AGGAGCTGCTATGGTCCCTAGTCCAGTGGGAAGGGCAGGAGGCGCCTGGAAAAATCTGCCTGG-- i colAng1.NW_012114444v1 C 0 I 5 s calJac3.chrUn_GL286459 88881 236 + 372756 agaaggctgcttagcctt-cacatggcttggctgtgcagccaggatttgcctgcaggcccttaactccagagctggtgccttcacaaccacatgatggta---tctgtAG--CATATCC------------------------AGAAGAG-----------------TGGATCCTCACAGAGCAGTAGGATTCAGTGGGTAGC--TAAGGGGCCAGAGGAGA-AGAGGCTGCTCTGGTCCCTAGGCCAGTGGGAAGGGCAGGAGGCACCAGGAAGAATCTGCCT--GG i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16321807 239 + 16356641 agaaggctgcatagagtcacacacagcttggctgtgcagccaggattt-cctgcaggcccctaactccagagctggtgccttCAGACCCGCATGATGGTA---CCTGTAG--CACATCC---------------------AGAAGAAGAG-----------------TGGATCCTCACAGAGCAGTAGGATCCAGTGGGTATC--TAAGGGGCCAGAGAAGA-AGAGGCTGCTCTGGTCCCTAGGCCAGTGGGAAGGGCAGAAGGCGCCAGGAAGAATCTGTCT--GG i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1192933 240 + 1231380 agaaggctgcttggactcacacatggcttggctgtgcagccaggatttgcctgcaggcccctaagtccagagcTGCTGCCTTCAGACCCACATGATGGTC---CCTGTAG--CACATCC---------------------AGAAGAACAG-----------------TGGATCCTCGCAGAGCAGTAGGATCCAGTGGGTATC--TAAGGGGCCAGAGGAGA-AGAGGATGCGCTGGTCCCCCGGCCAGTGGGAAGGGCAGGAGACGCCAGGAAGAATCTGCCT--GG i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2724439 240 + 11732439 agaaggctgcttagagtcacacgcggcttggctgtgcagccaggatttgcctgcaggcccctaactccagagctggtgccttcagaaccacatgacggta---ccTGTAG--CATACCC---------------------AGAAGAAGAG-----------------TGGATCCTCACAGAGCAGTAGGATCCAGTGGGTATC--TGAGGGGCCAGAGGAGA-AGAGGCTGCTCTGATCCCTAGGCCAGTGGGAAGGGCAGGAGGCGCCAGGAAGAATCTGCCT--GG i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22888047 269 + 22939663 AGAAGGCTGCTCAGGGCTGGATAGGGGCTGGATGTGCAGCTA-GACATACCTGAAGGCTCCTGACTCCAGGGTTGGTGCCTTAGGTGC--TATGATGCTG---CCTGCAG--TGGCCCTCAG----GGGTCTCTCACCTCAGGAGAAGAAGCAGGTGTCAGGCCGGCTGGATCCTCACAAAGCAGCTGTATGCAG-GGGCATCTGCAGAGGG---GAGGGGA-AGGGGTTGTCTTGGTCCCTCATCCAGTAGGAAAGGCTGAAGGCACCAGGAAGGCACTGCTT--GA i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181832398 229 + 182113224 aggaaacttCTCTGAGCTGTATAGAGACTGGTTGTGTTGACA-AGATTGCCTACAGTCCTTTCACTGTAGGCCTGCTGCTTTAGATAACACATAGTAATAGACTCTAGAGACCATTTCTTGA------------------AGAAGAGGGG-GTGCTACCAAATCAACTGGATCTTCACAGAATAGTCAGACATAGTGGGTGTC--CAAGAAGCAAGAGGTAA-AGGGGCTACCATGGTTCCCATGTCAGTTG------------------------------------ i mm10.chr2 C 0 C 0 s dasNov3.JH569290 312562 230 - 397369 ----TGATGCTCAGGGTCACACCAAGGTCAGCTGCTTAGTGG-GGTTTGT-----GCCCTCTGACCCCAGGGCCACTGCCTTGAGTGCCATATGACATTG---TTCACGG--CATGCCCCATCCCCGCCTGTCCCTCCTCAGAAGGAAAG--GGCTTCCAGCCTAGAAGGATCCCCACTAAGTGGTCAGTGCAGGCAAGAAAC--CTAAAGACCAGAGGAGAGGGGGGCTGCCA-----------------------GCAAGATCCCCCAGC---------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1900648 313 - 2029793 I e canFam3.chr24 47642448 1442 + 47698779 I e micMur3.chr18 56909564 557 + 57149010 I a score=221063.000000 s hg38.chr20_KI270870v1_alt 155007 25 + 183433 CAGGGCAGGGAAAGATGGGAGCTCA s panTro5.chr20 66490435 25 + 66533130 CAGGGCAGGGAAAGATGGGAGCTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157905 25 + 62195757 CAGGGCAGGGAAAGATGGGAGCTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544176 25 - 578057 CAGGGCAGGGAAAGATGGGAGCTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065742 25 - 110113093 CAGGGCAGGGAAAGATGGGAGCTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805117 23 - 92844088 --GGGCAGGGAAAGATGGGCGCTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96470643 23 + 96509753 --GGGCAGGGAAAGATGGGCGCTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16940699 23 - 16982598 --GGGCAGGGAAAGATGGGCGCTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3742755 23 - 3785965 --GGGCAGGGAAAGATGGGCACTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332829 23 - 90373283 --GGGCAGGGAAAGATGGGCGCTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133396 23 - 179258 --GGGCAGGGAGAGATGGGCGCTCA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89118 25 + 372756 CAGGACGGGGAAAGACGGGAGCTCA i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16322047 25 + 16356641 CAGGGCAGGAAAAGATGGGAGCTCA i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1193174 25 + 1231380 CAGGGCAGGGAAAGATGGGAGCTCA i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2724680 25 + 11732439 CAGGGCAGGGAAAGATGGGAGCTCA i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22888317 24 + 22939663 CAGGGAAAGGAGAGTCATG-GCACA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181832627 18 + 182113224 ------AGGGAGAAATAGAGATTA- i mm10.chr2 C 0 C 0 s dasNov3.JH569290 312792 25 - 397369 CACTGAACAGAGGGCTGGGTGGCCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1900648 313 - 2029793 I e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56909564 557 + 57149010 I a score=139078.000000 s hg38.chr20_KI270870v1_alt 155032 13 + 183433 TTGCTGGGTTGCT s panTro5.chr20 66490460 13 + 66533130 TTGCTGGGTTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157930 13 + 62195757 TTGCTGGGTTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544201 13 - 578057 CTGCTGGGTTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065767 13 - 110113093 CCGCTGGGTTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805140 13 - 92844088 CTGCTGGGTTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96470666 13 + 96509753 CTGCTGGGTTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16940722 13 - 16982598 CTGCTGGGTTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3742778 13 - 3785965 CTGCTGGGTTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332852 13 - 90373283 CTGCTGGGTTGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133419 13 - 179258 CTGCTGGGTTGCT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89143 13 + 372756 CAGCTGGGTTGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322072 13 + 16356641 CAGCTGGGTTGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193199 13 + 1231380 CCGCTGGGTTGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724705 13 + 11732439 CAGCTGGGTTGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910121 13 + 57149010 TTGCTGTGTTGGC i micMur3.chr18 I 557 C 0 s otoGar3.GL873542 22888341 13 + 22939663 CAGCTATGTTGGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832645 13 + 182113224 CAGGTGCCTTTCT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 312817 13 - 397369 CAGTGGGGATGCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1900648 313 - 2029793 I e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I a score=959303.000000 s hg38.chr20_KI270870v1_alt 155045 77 + 183433 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTAAAGAA----GAGGCCAGGGGAGGCCAGGTAG s panTro5.chr20 66490473 77 + 66533130 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTGAAGAA----GAGGCCAGGGGAGGCCAGGTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62157943 77 + 62195757 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTAAAGAA----GAGGCCAGGGGAGGCCAGGTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544214 77 - 578057 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTAAAGAA----GAGGCCAGGGGAGGCCAGGTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065780 77 - 110113093 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTGAAGAG----GAGGCCAGGGGAGGCCAGGTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805153 77 - 92844088 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTGAAGAG----GAGGCCAGGGGAGGCCAGGTAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96470679 77 + 96509753 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTGAAGAG----GAGGCCAGGGGAGGCCAGGTAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16940735 77 - 16982598 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTGAAGAG----GAGGCCAGGGGAGGCCAGGTAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3742791 77 - 3785965 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTGAAGAG----GAGGCCAGGGGAGGCCAGGTAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332865 77 - 90373283 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTGAAGAG----GAGGCCAGGGGAGGCCAGGTAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133432 67 - 179258 -------CCAGCCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGATGCCTGAAGA--------------GGAGGCCAGGTAG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89156 77 + 372756 -------CCAGTCT----CAGGAGAGTTGGGAACCATCTGGGTCCCCAGTCAGGGTGCCTGAAGAG----GAGGGCAGGGGAGGCCAGGTAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322085 77 + 16356641 -------CCAGTTT----CAGGAGAGTTGGGAACCATCTGGGCCCCCAGTCAGGATGCCTGAAGAA----GAGGGTAGGGGAGGCCAGGGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193212 77 + 1231380 -------CCGTCTT----CAGGAGAGTTGGGAACCGTCTGGGCCCCCAGTCAGGATGCCTGAGGAG----GAGGGCAGGGGAGGCCAGGTAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724718 77 + 11732439 -------CCAGCCT----CAGAAGAGTTGGGAACCATCTGGGCCTCCAGTCAGGATGCCTGAAGAG----GAGGGCAGGGGAGGCCAGGTAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910134 76 + 57149010 -------CCAGCCT----CAGGAGAGCTGGGAACCA-CTGGGCCACCTGTCAGGGTGCCTGGAGAG----GAGACCTGGGGAGGCCAGGTAC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1900961 76 - 2029793 -------CCAGCCT----CAGGAGAGCTTGGAACCA-CTGGGCCACCTGTCAGGGTGCCTGGAGAG----GAGGCCCGGGGAGGCCAGGTAC i proCoq1.NW_012150197v1 I 313 C 0 s otoGar3.GL873542 22888354 75 + 22939663 -------CCAACCT----CCAGATAGCTGGGAACCA-TGGGGTCACCAGGCAGGGTGCCTGGGGAG----AAGGCC-AGGGAGGCCAAGTGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832658 64 + 182113224 -------CCAGCTT----CAGGAAAGTTGTGCACCATCTAGATACCCTTCCGGTA---CTAAAGA--------------AGCAGACAGGCTA i mm10.chr2 C 0 C 0 s dasNov3.JH569290 312830 85 - 397369 GCAGGGGCTGGCCCTGCACAGGATTGT-----ACTGCCTGTG--CCCAGTCAGGGTGCCCAGAGGGAGGCGGGGCGGGGGGAGGCACGTTAG i dasNov3.JH569290 C 0 I 4540 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I a score=240393.000000 s hg38.chr20_KI270870v1_alt 155122 18 + 183433 ATGTCATTGCCTCTGGGG s panTro5.chr20 66490550 18 + 66533130 ATGTCATTGCCTCTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158020 18 + 62195757 ATGTCATTGCCTCTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544291 18 - 578057 ATGTCATTGCCTCTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065857 18 - 110113093 ATGTCATTGCCTCTGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805230 18 - 92844088 ATGTCATTGCCTCCGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96470756 18 + 96509753 ATGTCATTGCCTCCGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16940812 18 - 16982598 ATGTCATTGCCTCCGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3742868 18 - 3785965 ATGTCATTGCCTCCGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332942 18 - 90373283 ATGTCATTGCCTCCGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133499 18 - 179258 ATGTCATTGCCTCCGGGG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89233 18 + 372756 ATGTCATTGCCTCTGGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322162 18 + 16356641 ATGTCATTGCCTCTGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193289 18 + 1231380 ATGTCACTGCCTCTGGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724795 18 + 11732439 ATGTCATTGCCTCTGGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910210 18 + 57149010 ATTCCATTGCCTCCCAGG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1901037 18 - 2029793 ATGCCATTGCCTCCCGGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22888429 18 + 22939663 ATACCATTGCATCCTAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832722 18 + 182113224 ATGCCATTGTTTCCTGGG i mm10.chr2 C 0 I 25 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=1023170.000000 s hg38.chr20_KI270870v1_alt 155140 88 + 183433 ACAATCTGATAATTCCCCAGAGCAGGTGGGACTGGCTGGAGACCACGAAGGCTCCTCGAAATGGAGGCAGATTCTCCAGCCTCATCTG s panTro5.chr20 66490568 88 + 66533130 ACAATCTGATCATTCCCCAGAGCAGGTGGGACTGGCTGGAGACCACGAAGGCTCCTCGAAATGGAGGCAGATTCTCCAGCCTCATCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158038 88 + 62195757 ACAATCTGATCATTCCCCAGAGCAGGTGGGACTGGCTGGAGACCACGAAGGCTCCTCGAAATGGAGGCAGATTCTCCAGCCTCATCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544309 88 - 578057 ACAATCTGATCATTCCCCAGAGCAGGTGGGACTGGCTGGAGACCACGAAGGCTCCTCGAAATGGAGGCAGATTCTCCAGCCTCATCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065875 88 - 110113093 ACAATCTGATCATTCCCCAGGGCAGGTGGGACTGGCTGGAGACCACTAAGGCTCCTCGAAATGGAGGCAGATGCTGCAGCCTTGTCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805248 88 - 92844088 ACAATCTGATCATTCCCCAGGGCAGGTAGGACTGGCTGGAGACCACTAAGGCTCCTCGAAATGGAGTCAGATTCTCCAGCCTCATCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96470774 88 + 96509753 ACAATCTGATCATTCCCCAGGGCAGGTAGGACTGGCTGGAGACCACTAAGGCTCCTCGAAATGGAGTCAGATTCTCCAGCCTCATCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16940830 88 - 16982598 ACAATCTGATCATTCCCCAGGGCAGGTAGGACTGGCTGGAGACCACTAAGGCTCCTCGAAATGGAGTCAGATTCTCCAGCCTCATCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3742886 88 - 3785965 ACAATCTGATCATTCCCCAGGGCAGGTAGGACTGGCTGGAGACCACTAAGGCTCCTTGAAATGAAGTCAGATTCTCTAGCCTCATCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90332960 88 - 90373283 ACAATCTGATCATTCCCCAGGGCAGGTAGGACTGGCTGGAGACCACTAAGGCTCCTCGAAATGGAGTCAGATTCTCCAGCCTCATCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133517 88 - 179258 ACAATCTGATCATTCCCCAGGGCAGGTAGGACTGGCTGGAGACCACTAAGGCTCCTCGAAATGAAGTCAGATTCTCCAGCCTCATCTG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89251 88 + 372756 GCAATCTGACCATTGCTCAGGGCAGGTGGGACTGGCTGGAGACCACTAAGTCTCCTCGAAATGGAGGCAAATTCTCCAGCCTCATCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322180 88 + 16356641 ACAGTCTGACCATTCCTCAGGGCAGGTGGGACTGGCTGGAGACCATGAAACCTCTTCGAAATGGAGGCAAATTCCCCAGCCTCATCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193307 88 + 1231380 ACAATCTGACCATTCCTCAGGGCAGGTGGGACTGGCTGGAGACCACGAAGTCTCCTCGAAATGGAGGCAAATTCTCCAGCCTCATCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724813 88 + 11732439 ACAATCTGACCATTCCTCAGGGCAGGTGGGACCGGCTGGAGACCACTAAGACTCCTCCAAATGGAGGCAAATTCTCCAGCCTCATCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910228 86 + 57149010 ATA--CTGATTATTCCCCAGGACAAGTGGGACTGGCTGGAGGCCCTGAAGACCCCTTGAAGTGGAGGCAGATGCTTCAGCCTCCTCTG i micMur3.chr18 C 0 I 114 s proCoq1.NW_012150197v1 1901055 86 - 2029793 ACA--CTGATTGTTCCCCAGGGCAGGTGGGACTGGCTGGAGGCCCTGAAGACCCCTTGAAGTGGAAGCAGATGCTTCAGTCTCATCTG i proCoq1.NW_012150197v1 C 0 I 97 s otoGar3.GL873542 22888447 80 + 22939663 ACA--ATGACTATTCCCCAGGACAGGTAGGACAGGCTAGAGGCCCTGAAGACCCCTTGAAATGAAGGCAGTTGC------CTTATCTG i otoGar3.GL873542 C 0 I 5 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e dasNov3.JH569290 312915 4540 - 397369 I a score=760545.000000 s hg38.chr20_KI270870v1_alt 155228 92 + 183433 CCTCCATATTTGGTGAAGAGAGCTACACAGAAAGCATGGGGAGAAAATGGGGCACAATGGT-GGTCACGGG-TGCCCC-CCTGAGGGAGTTTGCA s panTro5.chr20 66490656 92 + 66533130 CCTCCATATTTGGTGAAGAGAGCTACACAGAAAGCATGGGGAGAAAATGGGGCACAATGGT-GGTCACGGG-TGCCCC-CCTGAGGGAGTTTGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158126 92 + 62195757 CCTCCATATTTGGTGAAGAGAGCTACACAGAAAGCATGGGGAGAAAATGGGGCACAATGGT-GGTCACGGG-TGCCCC-CCTGAGGGAGTTTGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544397 93 - 578057 CCTCCATATTTGGTGAAGAGAGCTACACAGAAAGCATGGGGAGAAAATGGGGCACAATGGTGGGTCACGGG-TGCCCC-CCTGAGGGAGTTTGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110065963 93 - 110113093 CCTCCATATTTGGTGAAGAGAGCTACACAGAAATCATGGAGAGAAAATGGGGCACAATGGT-GGTCACGGA-TGCCCCTCCTGAGGGGATTTGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805336 92 - 92844088 CCTCCATATTTGGTGAAGAGAGCTACAGAGAAATCATGGAGAAAAAATGGGGCACAAT-GT-GGTCAGGGA-TGCCCCTCCTGAGGGGATTTGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96470862 92 + 96509753 CCTCCATATTTGGTGAAGAGAGCTACAGAGAAATCATGGAGAAAAAATGGGGCACAAT-GT-GGTCAGGGA-TGCCCCTCCTGAGGGGATTTGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16940918 92 - 16982598 CCTCCATATTTGGTGAAGAGAGCTACAGAGAAATCATGGAGAAAAAATGGGGCACAAT-GT-GGTCAGGGG-TGCCCCTCCTGAGGGGATTTGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3742974 92 - 3785965 CCTCCATATTTGGTGAAGAGAGCTACAGAGAAATCATGGAGAAAAAATGGGGCACAAT-GT-GGTCAGGGA-TGCCCCTCCTGAGGGGATTTGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333048 92 - 90373283 CCTCCGTATTTGGTGAAGAGAGCTACAGAGAAATCATGGAGAAAAAATGGGGCACAAT-GT-GGTCAGGGA-TGCCCCTCCTGAGGGGATTTGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133605 92 - 179258 CCTCCATATTTGGTGAAGACAGCTACAGAGAAATCATGGAGAAAAAATGGGGCACAAT-GT-GGTCAGGGA-TGCCCCTCCTGAGGGGATTTGCA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89339 93 + 372756 CCTCAGTATTTGGTGAACAGAGCTACAGAGAAATCATGGAGGGAGAATGAGATACAATggt-ggtcaagggatgccccttctgagggg-tttaaa i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322268 93 + 16356641 CCTCTGTATTTGGTGAAGAGAGCTACAGAGAAATCATGGAGGGAAAATGGGACACAGTGGT-GGTCAGGGGATGCCCCTTCTGAGGGG-CTTGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193395 93 + 1231380 CCTCTGGATTTGGGGAAGAGAGCTACAGAGAAATCACGGAGGGAAAATGCGACACAATGGT-GGTCAGGGGTTGCCCCTTCTGAGGGG-CTTGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724901 93 + 11732439 CCTCTGTATTTGGTGAAGAGAGCTACAGAGAAATCATGGAGGGAAAATGGGACACAATGGT-GGTCAGGGGATGCCCCTTCTGAGGGG-CTTGCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22888532 92 + 22939663 TTTAGATATTTGGTGAAAATA-CAACAGAGAAATCAGGGAGGGAACAGGGGGCATGAGGGT-GGTCAGGGA-TATTCCTCACAAGGGAGTTTGTA i otoGar3.GL873542 I 5 C 0 e proCoq1.NW_012150197v1 1901141 97 - 2029793 I e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e micMur3.chr18 56910314 114 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=203033.000000 s hg38.chr20_KI270870v1_alt 155320 19 + 183433 CTTGACCTGAGGGAGGCGC s panTro5.chr20 66490748 19 + 66533130 CTTGACCTGAGGGAGGCGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158218 19 + 62195757 CTTGACCTGAGGGAGGCGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544490 19 - 578057 CTTGACCTGAGGGAGGCGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066056 19 - 110113093 CTTGACCTGAGGGAGGCGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805428 19 - 92844088 CTTGAGCTGAGGGAGGCGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96470954 19 + 96509753 CTTGAGCTGAGGGAGGCGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941010 19 - 16982598 CTTGAGCTGAGGGAGGCGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743066 19 - 3785965 CTTGAGCTGAGGGAGGCGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333140 19 - 90373283 CTTGAGCTGAGGGAGGCGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133697 19 - 179258 CTTGAGCTGAGGGAGGCGT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89432 19 + 372756 cttgacctgagggaggcga i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322361 19 + 16356641 CTTGACCTGAGGGAGGCGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193488 19 + 1231380 CTTGACCTGAGGGAGGCGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2724994 19 + 11732439 CCTGACCTGAGGGAGGCAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1901238 19 - 2029793 CTTGACCTGAGGGAGGAGA i proCoq1.NW_012150197v1 I 97 C 0 s otoGar3.GL873542 22888624 19 + 22939663 CTCAACCTGAGGGAGGAGA i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e micMur3.chr18 56910314 114 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=468379.000000 s hg38.chr20_KI270870v1_alt 155339 40 + 183433 GGGCCAGCCCTGGGGGTGTCTGAGGCAGGGGCAGGGACCC s panTro5.chr20 66490767 40 + 66533130 GGGCCAGCCCTGGGGGTGTCTGAGGCAGGGGCAGGGACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158237 40 + 62195757 GGGCCAGCCCTGGGGGTGTCTGAGGCAGGGGCAGGGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544509 40 - 578057 GGGCCAGCCCTGGGGGTGTCTGAGGCAGGGGCAGGGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066075 40 - 110113093 GGGCCAGCCCTGGGGGTGTCTGAGGCAGGGGCAGGGACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805447 40 - 92844088 AGGCCAGGCCTAGGGGTGTCTGGGACAGGGGCAGGGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96470973 40 + 96509753 AGGCCAGGCCTAGGGGTGTCTGGGACAGGGGCAGGGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941029 40 - 16982598 AGGCCAGGCCTAGGGGTGTCTGGGACAGGGGCAGGGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743085 40 - 3785965 AGGCCAGCCCTAGGGGTGTCTGGGACAGGGGCAGGGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333159 40 - 90373283 AGGCCAGCCCTAGGGGTGTCTGGGACAGGGGCAGGGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133716 40 - 179258 AGGCCAGCCCTAGGGGTGTCTGGGACAGGGGCAGGGACCC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89451 40 + 372756 gatccagccctgtgggtgtctgaggcaggggcAGGGACCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322380 40 + 16356641 GGTCCAGTCCTGTGGGTGTCGAAGGCAGGGGCAGGGACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193507 40 + 1231380 GGTCCAGCCCTGTGGGTGTCCGAGGCAGGGGCGGGGACCC i cebCap1.NW_016107870v1 C 0 I 169 s aotNan1.NW_018500483v1 2725013 40 + 11732439 GGTCCAGCCCTGTGGGTGTCCGAGGCAGGGGCAGGGACCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910428 40 + 57149010 GGGCCAGCTCTGTGGGCGTCTGACACAGGGGCAGGGACCC i micMur3.chr18 I 114 C 0 s proCoq1.NW_012150197v1 1901257 39 - 2029793 GGGCCAGCTCTGTGGGTGTCTGACAC-GGGGCAGGGACCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22888643 40 + 22939663 GGGTCACCTCTATGGGTATCTGACACAGGGGCAGGGATCC i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e dasNov3.JH569290 312915 4540 - 397369 I a score=10424.000000 s hg38.chr20_KI270870v1_alt 155379 1 + 183433 T s panTro5.chr20 66490807 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158277 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544549 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066115 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805487 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471013 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941069 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743125 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333199 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133756 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89491 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322420 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2725053 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910468 1 + 57149010 T i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1901296 1 - 2029793 T i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22888683 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1193547 169 + 1231380 I a score=359528.000000 s hg38.chr20_KI270870v1_alt 155380 30 + 183433 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG s panTro5.chr20 66490808 30 + 66533130 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158278 30 + 62195757 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544550 30 - 578057 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066116 30 - 110113093 GATGGGAGGGAGGAAGGGTGCCGGCCAGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805488 30 - 92844088 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471014 30 + 96509753 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941070 30 - 16982598 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743126 30 - 3785965 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333200 30 - 90373283 GGTGGGAGGGAGGAAGGGTGCCGGCCAGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133757 30 - 179258 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89492 30 + 372756 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322421 30 + 16356641 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193716 30 + 1231380 GGTGGGAGGGAGGAAGGGTGCCAGCCAGTG i cebCap1.NW_016107870v1 I 169 C 0 s aotNan1.NW_018500483v1 2725054 29 + 11732439 ggtgggagggagg-agggtgccagccagtg i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910469 29 + 57149010 GGCGTGAGGG-GAAAGGGTGCCAGCCAGTG i micMur3.chr18 C 0 I 100 s proCoq1.NW_012150197v1 1901297 29 - 2029793 GTTGTGAGGG-GAAAGGATGCCAGTCAGTG i proCoq1.NW_012150197v1 C 0 I 112 s otoGar3.GL873542 22888684 28 + 22939663 AGTATGATGG-GAAAGGATGCCAGGCAGT- i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e dasNov3.JH569290 312915 4540 - 397369 I a score=974051.000000 s hg38.chr20_KI270870v1_alt 155410 117 + 183433 AGGCTGGCCAA--GGGGCAGGGGCAGCG-GGAGGCATGAGGGATAAGGGAGTTCAGCCACGGCCAgactttgacgctgtgtgagatgc-aaacact-gcgggtctggggcagtggagtgatc s panTro5.chr20 66490838 117 + 66533130 AGGCTGGCCAA--GGGGCAGGGGCAGCG-GGAGGCATGAGGGATGAGGGAGTTCAGCCACGGCCAGACTTTGACGCTGTGTGAGATGC-AAACACT-GCGTGTCTGGGGCGGTGGAGTGATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158308 117 + 62195757 AGGCTGGCCAA--GGGGCAGGGGCAGCG-GGAGGCATGAGGGATGAGGGAGTTCAGCCACGGCCAGACTTTGACGCTGTGTGAGATGC-AAACACT-GCGTGTCTCGGGCGGTGGAGTGATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544580 117 - 578057 AGGCTGGCCAA--GGGGCAGGGGCAGTG-GGAGGCATGAGGGTTGAGGGAGTTCAGCCACGGCCAgactttgacgctgtgtgagatgc-aaacgct-gggggtctggggcagtggagtgacc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066146 116 - 110113093 GGGCTGGCCAA--GGggcgggggcggca-ggaggcatgagggatgagggagTTCAGCCACGGCCAGCCTTTGACGCTGTGTGAGATGT--AACACT-GGGGGTTTGGGGCAGTGGAGTGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805518 116 - 92844088 GGGCTGGCCAA--GGGGC-GGGGCAGCG-GGAGTCATGAGGGATGAGGGAGTTCAGCCATGGCCAgactttgacgctgtgtgagatgc-aaacact-ggggctttggggcagtggagtgacc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471044 116 + 96509753 GGGCTGGCCAA--GGGGC-AGGGCAGCG-GGAGTCATGAGGGATGAGGGAGTTCAGCCATGGCCAgactttgacgctgtgtgagatgc-aaacact-ggggctttggggcagtggagtgacc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941100 116 - 16982598 GGGCTGGCCAA--GGGGC-GGGGCAGCG-GGAGTCATGAGGGATGAGGGAGTTCAGCCATGGCCAGACTTTGACGCTGTGTGAGATGC-AAACACT-GGGGCTTTGGGGCAGTGGAGTGACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743156 116 - 3785965 GGGCTGGCCAA--GGGGC-GGGGCAGCG-GGAGGCATGAGGGATGAGGGAGTTCAGCCATGGCCAGACTTTGACGCTGTGTGAGATGC-AAACACT-GGGGCTTTGGGGCAGTGGAGTGACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333230 116 - 90373283 GGGCTGGCCAA--GGGGC-GGGGCAGCG-GGAGGCGTGAGGGATGAGGGAGTTCAGCCATGGCCAGACTTTGACGCTGTGTAAGATGC-AAACACT-GGGGCTTTGGGGGAGTGGAGTGACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133787 116 - 179258 GGGCTGGCCAA--GGGGC-GGGGCAGCG-GGAGGCATGAGGGATGAGGGAGTTCAGCCATGGCCAgactttgacgctgtgtgaggtgc-aaacact-ggggctttggggcagtggagtgacc i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89522 119 + 372756 GGACTGGGCAAGGGGGGGAGGGGCAGAG-GGAAGCATGATGGATGAGGGGCTTCAGCCACTGCCAGACTTTGACACTGAGTGAGATGC-AAACACA-GGGGACTTGGGGCAGTGGCGTGACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322451 117 + 16356641 GGACTGGGCAA--GGGGGAGGGGCAAAG-GGAAGCATGAGGGATGAGGGTCTTCAGCCACCGCCAGAGTTTGACTCTGAGTGAGATGC-AAACACA-GGGGACTTGGGGCAGTGGAGTGACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193746 117 + 1231380 GGACTGGGCAA--GGGGGAGGGGCAGAG-GGAAGCATGAGGGATGAGGGGCTTCAGCCACCGCCAGACTTTGACAGTGAGTAAGATGC-AAACACA-GGGGACTTGGGGCAGTGGAGTGACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725083 117 + 11732439 ggactgggcaa--gggggaggggcagag-ggaagcgtgagggatgaggggCTTCAGCCGCCGCCAGACTTTGACACTGAGTGAGATGC-AAACACA-GGGGACTTGGGGCAGTGGAGTGACC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22888712 100 + 22939663 --------------------GGGTAGAGAGGAGGAATGAGGG-TAAGGGGGCTCAGTCATGGCCAGACTCTGAT-TTGAGTGAGATGAAAAATGCTGGGGGGTTTTGAGCAGTGGAGGGAGC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1901326 112 - 2029793 I e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e micMur3.chr18 56910498 100 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=242359.000000 s hg38.chr20_KI270870v1_alt 155527 24 + 183433 ttgctgatgtgttttctggtttaT s panTro5.chr20 66490955 24 + 66533130 TTGCTGATGTGTTTTCTGGTTTAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158425 24 + 62195757 TTGCTGATGTGTTTTCTGGTTTAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544697 24 - 578057 ttgctgatgtgttttctggtttaT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066262 24 - 110113093 TTGCTGATGTGTTTTCTGGTTTAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805634 24 - 92844088 ttgcggatgtgttttctggtttaT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471160 24 + 96509753 ttgcggatgtgttttctggtttaT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941216 24 - 16982598 TTGCGGATGTGTTTTCTGGTTTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743272 24 - 3785965 TTGCGGATGTGTTTTCTGGTTTAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333346 24 - 90373283 TTGCTGATGTGTTTTCTGGTTTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133903 24 - 179258 ttgcggatgtgttttctggtttaT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89641 24 + 372756 TTGCTGGTGAGTTTTCTGGTGTAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322568 24 + 16356641 TTGCTGGTGAGTTTTCTGGTGTAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193863 24 + 1231380 TTGCTGGTGAGTTTTCTGGTGTAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725200 24 + 11732439 TTGCTGGTGAGTTTTCTGGTGTAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910598 24 + 57149010 ttgctgatttctcttctggtttaT i micMur3.chr18 I 100 C 0 s otoGar3.GL873542 22888812 23 + 22939663 TTGCTGATTTATTCTCTGGTTTA- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1901326 112 - 2029793 I e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e dasNov3.JH569290 312915 4540 - 397369 I a score=828980.000000 s hg38.chr20_KI270870v1_alt 155551 68 + 183433 TTGTCTGCACAAGATCCCTGAGATGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG s panTro5.chr20 66490979 68 + 66533130 TTGTCTGCACAAGATCCCTGAGATGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158449 68 + 62195757 TTGTCTGCACAAGATCCCTGAGATGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544721 68 - 578057 TTGTCTGCACAAGATCCCTGAGATGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066286 68 - 110113093 TTGTCTGCACAAGATCCCTGAGATGAGGGTCTTGTCCTACTAACCCCGGATGCCCAGGGTCAAGAGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805658 68 - 92844088 TTGCCTCTACAAGATCCCCGAGATGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471184 68 + 96509753 TTGCCTCTACAAGATCCCCAAGATGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941240 68 - 16982598 TTGCCTCTACAAGATCCCCGAGATGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743296 68 - 3785965 TTGCCTCTACAAGATCCCCGAGGTGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333370 68 - 90373283 TTGCCTCTACAAGATCCCTGAGATGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133927 68 - 179258 TTGCCTCTACAAGATCCCCGAGATGAGGGTCTTGTCATACTAACCCTGGATGCCCAGGGTCAAGAGAG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89665 68 + 372756 TTGTCTGCTCAAGATCCCTAAGATAAGGGACTTGTAATACTAACCCTGGATGCCCAGGGCCAAGAGAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322592 68 + 16356641 TTGTCTGCTCAAGATCCCTGAGATGAGGGACTTGTCATACTAACCCTGCATGCCCAGGGCCAAGAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193887 68 + 1231380 TTGTCTGCTCAAGATCCCTGAGATGAGGGACTTGTCATACTAACCCTCGATGCCCAGGGCCAAGAGAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725224 68 + 11732439 TTGTCTGCTCAAGATCCCTGAGATGAGGGACTTGTCATACTAACCCTGGATGTCCAGGGTCAAGAGAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910622 67 + 57149010 -TGTGTGCCCAAGATCCCTGAGAAAAGGGTCTCATCATACTAACCCTGGATGCCCAGGGTCCAGAGAG i micMur3.chr18 C 0 I 152 s proCoq1.NW_012150197v1 1901438 68 - 2029793 ttgtctgtccaagatccctGAGACAAGGGTCTCGTCACACTAACCCTGGATGCCCAGGGTCCAGAGAG i proCoq1.NW_012150197v1 I 112 I 73 s otoGar3.GL873542 22888835 68 + 22939663 TTGTCTGCCCAAGATCCCTGAGACAAGAAGCTCATCATACTGGCCCTAAATGCTCAGGGTGCAGAGAG i otoGar3.GL873542 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e dasNov3.JH569290 312915 4540 - 397369 I a score=125752.000000 s hg38.chr20_KI270870v1_alt 155619 15 + 183433 CAATCTGCCCTTGA-G s panTro5.chr20 66491047 15 + 66533130 CAATCTGCCCTTGC-G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158517 15 + 62195757 CAATCTGCCCTTGC-G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544789 15 - 578057 CAATCTGCCCTTGC-G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066354 16 - 110113093 AGATCTGCCCTTGCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805726 16 - 92844088 CAATCTGCCCTTGCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471252 16 + 96509753 CAATCTGCCCTTGCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941308 16 - 16982598 CAATCTGCCCTTGCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743364 16 - 3785965 CAATCTGCCCTTGCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333438 16 - 90373283 CAATCTGCCCTTGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 133995 16 - 179258 CAATCTGCCCTTGCAG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89733 16 + 372756 CCATCTGCCCTTGCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322660 16 + 16356641 CGATCTGCTCTTGCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193955 16 + 1231380 CGATCTGCCCTTGCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725292 16 + 11732439 CGATCTGCCCTCGCAG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22888903 16 + 22939663 GGGTGTGCTTCTGCAG i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1901506 73 - 2029793 I e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181832740 25 + 182113224 I e micMur3.chr18 56910689 152 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=316450.000000 s hg38.chr20_KI270870v1_alt 155634 35 + 183433 GCAAACAGTGC-------TGAGTGGAGGGAGGGAGGGGAAGT s panTro5.chr20 66491062 35 + 66533130 GCAAACAGTGC-------TGAGTGGAGGGAGGGAGGGGAAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158532 35 + 62195757 GCAAACAGTGC-------TGAGTGGAGGGAGGGAGGGGAAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544804 23 - 578057 GCAAACAGTGC-------TGAGTGGAGGGA------------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066370 35 - 110113093 GCAAACAGTGC-------TGAGTGCAGGGAGGGAGGGGAAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805742 35 - 92844088 GCAAACAGTGC-------TGAGTGGAGGGAGGGAGGGGGAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471268 35 + 96509753 GCAAACAGTGC-------TGAGTGGAGGGAGGGAGGGGGAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941324 35 - 16982598 GCAAACAGTGC-------TGAGTGGAGGGAGGGAGGGGGAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743380 35 - 3785965 GCAAACAGTGC-------TGAGTGGAGGGAGGGAGGGGGAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333454 35 - 90373283 GCAAACAGTGC-------TGAGTGGAGGGAGGGAGGGGGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134011 35 - 179258 GCAAACAGTGC-------TGAGTGGAGGGAGGGAGGGGGAGT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89749 35 + 372756 GCAAACAGTGC-------TGTGTGGAGGGAGGGAGGGGGAGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322676 35 + 16356641 GCAAATGGTGC-------TGTGTGGAGGGAGGGAGGAGGAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193971 27 + 1231380 GCAAACAGTAC-------TGTGTGGAGGGA--------GAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725308 35 + 11732439 GCAAACAGTGC-------TGTGTGGAGGGAGGCAGGGGGAGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22888919 38 + 22939663 GGAAATAGCACATGCTATTGAGTAAATGGA----GGGGCAGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832765 35 + 182113224 GCACACAATAC-------TAAGTGAACGGAGGGAGGGAGAGC i mm10.chr2 I 25 C 0 e proCoq1.NW_012150197v1 1901506 73 - 2029793 I e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56910689 152 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=873812.000000 s hg38.chr20_KI270870v1_alt 155669 82 + 183433 ----------CCAGGGCCGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATTGCATTTCCTCACCC s panTro5.chr20 66491097 82 + 66533130 ----------CCAGGGCCGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATTGCATTTCCTCACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158567 82 + 62195757 ----------CCAGGGCCGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATTGCATTTCCTCACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544827 59 - 578057 ---------------------------------GGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATTGCATTTCCTCACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066405 82 - 110113093 ----------CCAGGGCCGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACACGGCAG-GGGGCTTCACATTGCATTTCCTCACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805777 82 - 92844088 ----------CTAGGGCTGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATGGCATATCCTCACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471303 82 + 96509753 ----------CTAGGGCTGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATGCCATATCCTCACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941359 82 - 16982598 ----------CTAGGGCTGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATGGCATATCCTCACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743415 82 - 3785965 ----------CTAGGGCTGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATGGCATATCCTCACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333489 82 - 90373283 ----------CTAGGGCCGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATGGCATATCCTCACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134046 82 - 179258 ----------CTAGGGCTGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCACATGGCATATCCTCACCC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89784 82 + 372756 ----------CTAGGGCTGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GGGGCTCCATGTGGCATTTTCTCACCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322711 81 + 16356641 ----------CCGGGGCTGGCCTCAAGTCACT-GGGACATCTGGATGAGTGCTGAGACAGGGCAG-GCGGCTCCATGTGGCATTTCCTCACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1193998 82 + 1231380 ----------CCAGGGCTGGCCTCAAGTCACTGGGGACATCTGGATGAGTGCTGAGACAGGGCAG-GCGGCTCCATGTGGCATTTCCTCACCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725343 82 + 11732439 ----------CCAGGGCTGGCCTCGAGTCACTGGGGACGTCTGGATGAGTGCTGAGACAGGGCAG-GCGGCTCCATGTGGCACTTCCTCACCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1901579 83 - 2029793 ----------CCAGGGCTGACCTCGAGTTGCTGGGGACATCTGGATGGGTGTAGGGACAGGGCAGGGGGCCTCCACGTGGCATCTCCTCACCG i proCoq1.NW_012150197v1 I 73 I 2 s otoGar3.GL873542 22888957 63 + 22939663 ----------CCAGGGCTGACCTTGAGTTGCTAGGGACATCTGGAT--------------------GAGCCTCAACATGGCATTTCCTCATCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832800 90 + 182113224 TTAGGGAGCTTTAGTACCAGCCTTGAGTCACTGGAGATATCTAGGTGGGTGCTGGGACAGTG--G-AAATATATACATGGTGACTCATCACAC i mm10.chr2 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56910689 152 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=1417486.000000 s hg38.chr20_KI270870v1_alt 155751 113 + 183433 AGATCCCAGGACTGGGCTGCCCGGGAGAAGCTGACTTGGAGCTCG-CTCTCCAGACAGCTGGCAATTGGGTACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA s panTro5.chr20 66491179 113 + 66533130 AGATCCCAGGACTGGGCTGCCCGGGAGAAGCTGACTTGAAGCTCG-CTCTCCAGACAGCTGGCAATTGGGTACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158649 113 + 62195757 AGATCCCAGGACTGGGCTGCCCGGGAGAAGCTGACTTGAAGCTCG-CTCTCCAGACAGCTGGCAATTGGGTACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544886 113 - 578057 AGATCCCAGGACTGGGCTACCCGGGAGAAGCTGACTTGGAGCTCC-CTCTCCAGACAGCTGGCAGTTGGGTACCTCTCCCTGTGCCTGGCATCCCTGCCTGCCACGTAAAGCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066487 113 - 110113093 AGATCCCAGGACTGGGCTGCCTGGGAGAAGCTGACTTGGAGCTCG-TTCTCCAGACAGCTGGCAACTGGGTACCTCTCCCTGTGCCTGGCACCCCTGCCTACCACATAAAGCCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805859 113 - 92844088 AGATCTCAGGACTGGACTGCCCGGGAGAAGCTGACTTGGAGCTCA-CTCTCCAGACAGCTGGCAACTGGGGACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471385 113 + 96509753 AGATCTCAGGACTGGACTGCCCGGGAGAAGCTGACTTGGAGCTCA-CTCTCCAGACAGCTGGCAACTGGGGACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941441 113 - 16982598 AGATCTCAGGACTGGACTGCCCGGGAGAAGCTGACTTGGAGCTCA-CTCTCCAGACAGCTGGCAACTGGGGACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743497 113 - 3785965 AGATCTCAGGACTGGGCTGCCCGGGAGAAGCTGACTTGGAGCTCA-CTCTCCAGACAGCTGGCAACTGGGGACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333571 113 - 90373283 AGATCTCAGGACTGGGCTGCCCAGGAGAAGCTGACTTGGAGCTCA-CTCTCCAGACAGCTGGCAACTGGGGACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134128 113 - 179258 AGATCTCAGGACTGGGCTGCCCGGGAGAAGCTGACTTGGAGCTCA-CTCTCCAGACAGCTGGCAACTGGGGACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89866 113 + 372756 AAATCCCAGCGCTGGGCTGCCTGTGGGAAGCTGACTTGGAGCTCG-CTCTCCAGATAGTTGGCAACTGGGTACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322792 113 + 16356641 AAATCCCAGCACTGGGCTGCCTGGGGGAAGCTGACTTGGAGCCCG-CTCTCCAGACAGCTGGCAACTGGGTACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194080 113 + 1231380 AAATCCCAGCACTAGGCTGCCTGAGGGAAGCTGACCTGGAGCTCG-CCCTCCAGACAGCTGGCAGCTGGGTACCTCTCCCTGCGCCTGGCACCCCTGCCTGCCACATAAAGCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725425 113 + 11732439 AAATCCCAGCACTGGGCTGCCTAGGGGAAGCCGACTTGGAGCTCG-CTCTCCAGACAGCTGACAACTGGGTACCTCTCCCTGTGCCTGGCACCCCTGCCTGCCACATAAAGCCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910841 113 + 57149010 AGATCCCAGTGCTGGGCTGCCCGGGAGGAGCCGACTTGGAGCTGGCCTTTCCAGAGATCAGGCAACTGGGTGCCTCTCCCTGCACCTGGCCCTCCTG-CTGCCATGTAAAGCCA i micMur3.chr18 I 152 I 42 s proCoq1.NW_012150197v1 1901664 114 - 2029793 AGACCCCAGGGCTGGGCTGCCCGGGAGGAGCCGACTTGGAGTTGGCCGTTCCAGAGACCTGGCAACTGGGTGCCTCTCCCTGCACCTGGCACTCCCGCCTGCCACGTAAAGCCA i proCoq1.NW_012150197v1 I 2 C 0 s otoGar3.GL873542 22889020 114 + 22939663 ATATCCCAGCACTGGGCTGCCCAGGAGGAGCTGATTTGGAGCTGGCCTCTCCAGAGGCCTGGCAATGAGGTGCTTCTCCCTGTGCCTGGCAGCCATGCCTGCCACCTAAATCTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832890 89 + 182113224 AAATGCTAGCCCTGGACTGCCTGTAGGGAGCCAACTTGGAGCTGG-C-CTCAAGAC--CTGGCAGCCGGCTATCTTTT-----------------TGCTTTTCAC----AGTCA i mm10.chr2 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=150965.000000 s hg38.chr20_KI270870v1_alt 155864 19 + 183433 TCCTGCAAAGGTGCACT--GT s panTro5.chr20 66491292 19 + 66533130 TCCTGCAAAGGTGCACT--GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158762 19 + 62195757 TCCTGCAAAGGTGCACT--GT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 544999 19 - 578057 TCCTGCAAAGGTGCACT--GT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066600 19 - 110113093 TCCTGCAAAGGTGCACT--GT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805972 18 - 92844088 TCCTGCAAAGGTGCACT--G- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471498 18 + 96509753 TCCTGCAAAGGTGCACT--G- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941554 18 - 16982598 TCCTGCAAAGGTGCACT--G- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743610 18 - 3785965 TCCTGCAAAGGTGCACT--G- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333684 18 - 90373283 TCCTGCAAAGGTGCACT--G- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134241 18 - 179258 TCCTGCAAAGGTGCACT--G- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89979 19 + 372756 TTCTGCAAAGGTGCACT--TT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322905 19 + 16356641 TTCTGCAAAGGTGCACC--GT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194193 19 + 1231380 TTCTGCAAAGGTGCACT--GT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725538 19 + 11732439 TTCTGCAAAGGTGCACT--GT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1901778 19 - 2029793 GTCTACAGAGGCTCACC--GA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22889134 21 + 22939663 GTCTGTAGGGGTTCACTTAGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181832979 2 + 182113224 -------------------GT i mm10.chr2 C 0 C 0 e canFam3.chr24 47642448 1442 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56910954 42 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=174340.000000 s hg38.chr20_KI270870v1_alt 155883 21 + 183433 GGTCCCAGC-----TCACCCACCTAT---- s panTro5.chr20 66491311 21 + 66533130 GGTCCCAGC-----TCACCCACCTAT---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158781 21 + 62195757 GGTCCCAGC-----TCACCCACCTAT---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545018 21 - 578057 GGTCCCAGC-----TCACCCACCTAT---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066619 21 - 110113093 GGTCCCAGC-----TCACCCACCTAT---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92805990 21 - 92844088 GGTCCCAGA-----TCACCCACCTAT---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471516 21 + 96509753 GGTCCCAGA-----TCACCCACCTAT---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941572 21 - 16982598 GGTCCCAGA-----TCACCCACCTAT---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743628 21 - 3785965 GGTCCCAGA-----TCACCCACCTAT---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333702 21 - 90373283 GGTCCCAGA-----TCACCAACCTAT---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134259 21 - 179258 GGTCCCAGA-----TCACCCACCTAT---- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 89998 12 + 372756 GGTCCCAGAT----TC-------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322924 22 + 16356641 GGCCCCAGAT----TCACCCATGTAT---- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194212 22 + 1231380 GGCCCCAGAT----TCGCCCATGTAT---- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725557 22 + 11732439 GGCCCCAGAT----TCACCCACATAT---- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1901797 21 - 2029793 GGCCCCAGG-----TCACTCACCACC---- i proCoq1.NW_012150197v1 C 0 I 3 s otoGar3.GL873542 22889155 26 + 22939663 GGTGGTAGGGTGTATCACCCACCACC---- i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181832981 21 + 182113224 GGCCTCAGA-----TCACTCACCAAG---- i mm10.chr2 C 0 I 3 s canFam3.chr24 47643890 25 + 47698779 GGTCCCAGG-----TCATGCACCATTTGCT i canFam3.chr24 I 1442 C 0 e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56910954 42 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=2028511.000000 s hg38.chr20_KI270870v1_alt 155904 182 + 183433 GACACTTC-----AGGGACATCC--------------------CTG--------------------CATCT-CCCATCTA--TACCAGCCGCTCCTCTTGGCTTCGAGATCTGCCCCTGGTGGGTTGCT-GGCTACCGGATGTC--TGACAACAGCTGCC---AG-------CCT---------GGTTCGGAAGTGCTACCCAAGGCCCTCCTGTTTGCACCTCCA--GGTCCAGCTGCCACTCACCTGGTGCC s panTro5.chr20 66491332 182 + 66533130 GACACTTC-----AGGGACATCC--------------------CTA--------------------CATCT-CCCATCTA--TACCAGCCGCTCCTCTTGGCTTCGAGATCTGCCCCTGGTGGGTTGCT-GGCTACCGGATGTC--TGACAACAGCTGCC---AG-------CCT---------GGTTCGGAAGTGCTACCCAAGGCCCTCCTGTTTGCACCTCCA--GGTCCAGCTGCCACTCACCTGGTGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158802 182 + 62195757 GACACTTC-----AGGGACATCC--------------------CTA--------------------CATCT-CCCATCTA--TACCAGCCGCTCCTCTTGGCTTCGAGATCTGCCCCTGGTGGGTTGCT-GGCTACCGGATGTC--TGACAACAGCTGCC---AG-------CCT---------GGTTCGGAAGTGCTACCCAAGGCCCTCCTGTTTGCACCTCCA--GGTCCAGCTGCCACTCACCTGGTGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545039 182 - 578057 GACACTTC-----AGGGACATCC--------------------CTG--------------------CATCT-CCCATCTA--TACCAGCCGCTCCTCTTGGCTTCGAGATCTGCCCCTGGTGGGTTGTT-GGCTACCGGATGTC--TGACAACAGCTGCC---AG-------CCT---------GGTTCGGAAGTGCTACCCAAGGCCCTCCTGTTTGCACCTCCA--GGTCCAGCTGCCACTCACCTGGTGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066640 182 - 110113093 GACACTTC-----AGGGACATCC--------------------CTG--------------------CATCT-CCCATGTA--TACCAGCCACTCCTCTTGGCTTCGAGGTCTGCCCCTGGTGGGTTGCC-GGCTACCGGATGTC--TGACAACAGCTGCC---AG-------CCT---------GGTTCGGAAGTGCTACCCAAGGCCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCCACTCACCTGGTGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806011 180 - 92844088 GACACTTC-----AGGGACATCC--------------------CTG--------------------CATCT-CCCATCTA--TACCAGCCACCCCTCTTGGCTTCGAGGTCTGACCCTGGTGGGTTGCT-GGCTACCAGATGTC--TGACAACAGC--CC---AG-------CCT---------GGTTCGGGAATGCTACCCAAGGCCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCCACCCACATGGTGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471537 180 + 96509753 GACACTTC-----AGGGACATCC--------------------CTG--------------------CATCT-CCCATCTA--TACCAGCCACCCCTCTTGGCTTCGAGGTCTGACCCTGGTGGGTTGCT-GGCTACCAGATGTC--TGACAACAGC--CC---AG-------CCT---------GGTTCGGGAATGCTACCCAAGGCCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCCACCCACATGGTGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941593 180 - 16982598 GACACTTC-----AGGGACATCC--------------------CTG--------------------CATCT-CCCATCTA--TACCAGCCACCCCTCTTGGCTTCGAGGTCTGACCCTGGTGGGTTGCT-GGCTACCAGATGTC--TGACAACAGC--CC---AG-------CCT---------GGTTCGGGAGTGCTACCCAAGGCCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCCACCCACATGGTGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743649 180 - 3785965 GACACTTC-----AGGGACATCC--------------------CTG--------------------CATCT-CCCATCTA--TACCAGCCACCCCTCTTGGCTTCGAGGTCTGACCCTGGTGGGTTGCT-GGCTACCAGATGTC--TGACAACAGC--CC---AG-------CCT---------GGTTCGGGAGTGCTACCCAAGGCCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCCACCCACATGGTGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333723 180 - 90373283 GACACTTC-----AGGGACATCC--------------------CTG--------------------CATCT-CCCATCTA--TACCAGCCACCCCTCTTGGCTTCAAGGTCTGACCCTGGTGGGTTGCT-GGCTACCAGATGTC--TGACAACAGC--CC---AG-------CCT---------GGTTCAGAAGTGCTACCCAAGGCCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCCACCCACATGGTGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134280 180 - 179258 GACACTTC-----AGGGACATCC--------------------CTG--------------------CATCT-CCCATCTA--TACCAGCCACCCCTCTTGGCTTCGAGGTCTGACCCTGGTGGGTTGCT-GGCTACCAGATGTC--TGACAACAGC--CC---AG-------CCT---------GGTTCGGGAGTGCTACCCAAGGCCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCCACCCACATGGTGCC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90010 174 + 372756 -------------TGGGACATCC--------------------CTA--------------------CATCT-CCCATCTA--TATCAGCCACCCCTCTTGGCTTCGAGGTCTGCTCCTGGTGGGTTGCT-GGCTACCTGATGTC--TGACAACAGCTGCC---AG-------CCT---------GGTTCAGAAGTGTTACCCAAGGCCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCAACCCACCTGGTGTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16322946 164 + 16356641 GACACTTCCGGGATTGTAGATCC--------------------CTA--------------------CATCT-CCCATCTA--TATCAGCCACCCCTCTGGGCTTCGAGGTCTGCTCCTGGTGGGGTGCT-GGCTACCTGATGTC--TGACAGCAG----------------------------------------GTTACCCAAGG--CTCCTGTCTGCACCTCCA--GGTCCAGCTGCAACCCACCTGGTGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194234 182 + 1231380 GACACTTC-----TGGGGCATCC--------------------CGA--------------------CATCT-CCCATCTA--TATCAGCCACCCCTCTTGACTTCGAGGTCGGCTCCTGGTGGGTTGCT-GGCTACCTGATGTC--CGACAGCAGCTGCC---AG-------CCT---------GGTTTAGAAGTGTTACCCAAGACCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCAACCCACCTGGTGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725579 182 + 11732439 GACACTTC-----TGGGACATCC--------------------CTA--------------------CATCT-CCCATCTA--TATCAGCCGCCCCTCTTGGCTTCGAGGTCTGCTCCTGGTGGGTTGCT-GGCTACGTGATGTC--TGACGACAGCTGCC---AG-------CCT---------GGTTCAGAAGTGTTACCTAAGGCCCTCCTGTCTGCACCTCCA--GGTCCAGCTGCAACCCACCTAGTGTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56910996 183 + 57149010 GACACTTC-----AGGGATTTCC--------------------TTG--------------------CACCT-CCCATCTATATACCAGCCACCACTCTTGGCTCTGAGGTAGGCCACTGGTAGAATGCC-AGCTACCTGATGTC--TGACAGCTACTGCC---AG-------CA----------GGTTTGGAGGTACCACCTGAGGCCCTCCTGTCTGCACTGACA--GGTCCAGCTTCCACCTACCTGGTGCC i micMur3.chr18 I 42 I 237 s proCoq1.NW_012150197v1 1901821 176 - 2029793 GACACTTC-----AGGGACTTCC--------------------CTG--------------------CATCT-CCCATTT---TACCAGCCACCACTCGTGGCTCTGAGGTCTGCCACTGCT-GGATTCC-AGCTACCCAATGTC--TGACA---ACTGCC---AG-------CA----------GGTTTGGAGGTACCACCCGAGGCCCTCCTGTCTGCACTGACA--GGTCCAGCTTCCACCTACCTGGTGCC i proCoq1.NW_012150197v1 I 3 C 0 s otoGar3.GL873542 22889184 155 + 22939663 GAAACTTC-----AGGGGGTCCC--------------------CTC--------------------CATCT-TCTA------TGCCAG-CACTACTTTTGGCTTGGAGGTCTGCCGCTGGTGGATCGTC-AGCAGCTTGATGTT--TGACA---ACTGCC---AG-------CA----------GGCCTGGAGGCATCACCTGAGAGTCTCCTGGCTGCACCCACA--GGTCTGTT------------------ i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181833005 206 + 182113224 GACACTGA-----AAGAACATTC--------------------CTAGACTTGTTTCACTTTCTCATCATTT-CCCATCTA--TGCTAGCTACCATGAACAA-TTGGAGGCTATCTGTTGTTTG-----T-GGCCACCAGATATATGTGACCACAGCTGCCACAAG-------CTCATATGTGTGGGCATAAAACCACCACACAAGATTCTCCTATTTATACATAAA--GACCTGGTTGACATCCA--TAGTC-- i mm10.chr2 I 3 C 0 s canFam3.chr24 47643915 211 + 47698779 GACACTCT-----GAGGAGACCCTTGAATTCACCTCCCCTCCACTG--------------------CATCTCCCCATTTA--TACCAGCCACCACTCCTGACCCCAAGATCGGTCCCTGGTGGGTTGCCAAGCCCTCTGATGTG--TGGCCACAGCCACC---AGGTAAGGCCTG---------GGTTTGTAGGCACCACCCACGGCC--CCTATTTGCACCCCCAAGAGTCTAGGTGCCACTCATGTGGCACT i canFam3.chr24 C 0 C 0 e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=1949777.000000 s hg38.chr20_KI270870v1_alt 156086 212 + 183433 CAGGGA--------------GTGGAAACATCCTCTGCTACCACCTCGTCCTCACGACTAGTCTGGTCCACCACCTGTTGCAGTAAGACGTTTCTG--GGGCGGCCCCTCCTTCTTCAAGGCCGATACCCACTCACATGTTCCCCTCCGGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGAGGAGTGGTGGAAGAGCTGGCACAGGGGA-----------------------------CAATGTCACCAG s panTro5.chr20 66491514 212 + 66533130 CAGGGA--------------GTGAAAACATCCTCTGCTACCACCTCGTCCTCACGACTAGTCTGGTCCACCACCTGTTGCAGTAAGACGTTTCTG--GGGTGGCCCCTCCTTCTTCAAGGCCGATACCCACTCACATGTTCCCCTCCGGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGTGGAAGAGCTGGCACAGGGGA-----------------------------CAATGTCACCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62158984 211 + 62195757 CAGGGA--------------GTGAAAACATCCTCTGCTACCACCTCGTCCTCACGACTAGTCTGGTCCACCACCTGTTGCAGTAAGACG-TTCTG--GGGTGGCCCCTCCTTCTTCAAGGCCGATACCCACTCACATGTTCCCCTCCGGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGTGGAAGAGCTGGCACAGGGGA-----------------------------CAATGTCACCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545221 212 - 578057 CAGGGA--------------GTGAAAACATCCTCTGCTACCACCTCGTCCTCACGACTAGTCTGGTCCACCACCTGTTGCAGTAAGACGTTTCTG--GGGTGGCCCCTCCTTCTTCAAGGCTGATACCCACTCACACGTTCCCCTCCGGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGTGGAAGAGCTGGCACAGGGGA-----------------------------CAATGTCACCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110066822 228 - 110113093 CAGGGA--------------GTGAAAACATCCTCTGCTACCACCTCATCCTCACGACTAGTCTGTTCCACCACCTGTTGCAGTAAGACGTTTCTG--GGGTGGCCCCTCCTTCTTCAAGGCCGACACCCACTCACACGTTCCCCTCCAGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGTGGAAGAGCTGGCACAGGGGA------------GTTCCTGTTA-TGGCAGCAATGTCACCAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806191 228 - 92844088 CAGGGA--------------GTGAAAACATCCTCTGCTACCACCTCATCCTCATGACTAGTCTGTTCCACCACCTGTTGCAGTAAGACGTTTCTG--GGGCAGCCCCTTCTTCTTCAAGGCCAATACCCACTCGCACGTTCCCCTCCAGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGAGGAAGAGCTGGCACAGGGGA------------GTTCCTGTTA-CGACAGCAATGTCACCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471717 228 + 96509753 CAGGGA--------------GTGAAAACATCCTCTGCTACCACCTCATCCTCATGACTAGTCTGTTCCACCACCTGTTGCAGTAAGACGTTTCTG--GGGCAGCCCCTTCTTCTTCAAGGCCAATACCCACTCGCACATTCCCCTCCAGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGAGGAAGAGCTGGCACAGGGGA------------GTTCCTGTTA-CGACAGCAATGTCACCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16941773 228 - 16982598 CAGGGA--------------GTGAAAACATCCTCTGCTGCCACCTCATCCTCATGACTAGTCTGTTCCACCACCTGTTGCAGTAAGACGTTTCTG--GGGCAGCCCCTTCTTCTTCAAGGCCAATACCCACTCGCACGTTCCCCTCCAGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGAGGAAGAGCTGGCACAGGGGA------------GTTCCTGTTA-CGACAGCAATGTCACCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3743829 228 - 3785965 CAGGGA--------------GTGAAAACATCCTCTGCTACCACCTCATCCTCATGACGAGTCTGTTCCACCACCTGTTGCAGTAAGACGTTTCTG--GGGCAGCCCCTTCTTCTTCAAGGCCAATACCCACTCGCATGTTCCCCTCCAGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGAGGAAGAGCTGGCACAGGGGA------------GTTCCTGTTA-CGACAGCAATGTCACCAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90333903 228 - 90373283 CAGGGA--------------GTGAAAACATCCTCTGCTACCACCTCATCCTCATGACTAGTCTGTTCCACCACCTGTTGCAGTAAGATGTTTCTG--GGGCAGCCCCTTCTTCTTCAAGGCCAATACCCATTCGCACGTTCCCCTCCAGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGCGGAGGAAGAGCTGGCACAGGGGA------------GTTCATGTTA-CGACAGCAATGTCACCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134460 228 - 179258 CAGGGA--------------GTGAAAACATCCTCTGCTACCACCTCATCCTCATGAGTAGTCTGTTCCACCACCTGTTGCAGTAAGACGTTTCCG--GGGCAGCCCCTTCTTCTTCAAGGCCAATACCCACTCGCACGTTCCCCTCCAGGTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGAGGAAGAGCTGGCACAGGGGA------------GTTCCTGTTA-CGACAGCAATGTCACCAA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90184 238 + 372756 CAGGGA--------------GTGAAAACATCCTCTTCTACCACCTCATCCTCACGACAAGTCTGGTCTACCACCTGTTGCAGAAAGACATTTCTTGGGGGGGGTCCCTCCATCTTCAAGGCCGACATCCACTCAAGCGTTCCTCTCCAGTTTTTCCTTTCACAATTCAGAAGAAGCAGTGAGGAGTGGGGAGTGGGGAGTGGTGCAAGAGCTGGCACAGGGGA------------GTTCCTGAGGGTGGCAGCAATGCCACCAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323110 216 + 16356641 CAGGGA--------------GTGAAAATGTCCTCTGCTACCACCTCATCCTCACGACAAGTCTGGTCTATCACCTGTTGCAGAAAGACGTTTCTTGGTGGGGGGCCCTCCGTCTTCAAGGCCGACA---------------CCCTCCAGTTTTTCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGTGCAAGAGCTGGCACAAGGGA------------GTTCGTGTTAGTGGCAGCGATGCCGCCAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194416 222 + 1231380 CAGGGA--------------GTGAAAACGTCCTCTGCTACCACCTCATCCTCACGACAAGTCTGGTCTACCACCTGTTGTAGAAAGATGTTTCTTTGGGGGCGCCCCTCTGTCTTCAAGGCCGACACCCACTCGCACGTTCCTC---------TCCTTTCACAATTCACAAGAGGCAGTGA-------GGAGTGGGGAGTGGTGCAAGAGCTGGCACAGGGGA------------ATTCCTGTTAGTGGCAGCGACGCCACCAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725761 214 + 11732439 CAGGGA--------------GGGAAAACATCCTCTGCCGCCACCTCATCCTCACGACAA-TCTGGTCTACCTCC--------------GTTTCCT--GGGGAGCCCCTCCGTCTTCAAGGCCGACACCCACTCTCACGTTCCTCCCCAGTTTTTCCTTTCACAATTCACAGGAGGCGGTGA-------GGAGTGGGGAGTGGTGCAAGAGCTGGCACAGGGGA------------GTTCCTGTTAGTGGCAGCGATGCCACCAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1901997 253 - 2029793 CAGGTGAAAACGTCACTCCCGTGAAAACGTCTGCTGCTACCACCTCCTCCTGGTGACCAGTCTCTTCTACCACCAGTTGCAGTCAGAAGTTTCTG--GAGCAACCTCTGCTTCTCCAGGGCTGCTACCCTCCCATAATTTCCCCTCGAGTTTTTCCTCCCATAAATCACAAGAGACAATGA-------GCAGTGGGGAGTGGCAGAGGGG-TGGTGCAGGGGAAG-GGACACTGAGTTCCTCCTAGTGGCAGCAATGTCGCTGA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22889339 166 + 22939663 -----------------------------------------------------------------------------------CAGAAACTTCTG--GTCCAGCCTCTCCTTCTCCAAGGCTGCTACCCACATGTACTTTCCTTTTGAGTCTTCCCTTCCACAAATCACAAGA------GA-------GCAGTTGGGAGTGGCAGAGGGGCTGGTGCAGGGGAGGAGGACACTGAGTTCCTCCTGATGGCAGCAATATGGTTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181833211 192 + 182113224 CACTGT--------------GTGGAGTCATCTATTGTGGCCACCTCCTCTTAACTA--AGCTGGGACTAATATCCACTGCAGT------TTTCTG------AATAGCTTTTACTTACAGGGTACCA---------------CCCCTTGAGTTTCCATCTCATAGTTCATAAGAGACAAGGA-------GGAGTACTG------GCAGGGACTGGTTCAGATAAAGGTGGTCATGAGCTTCTGACAGTG---------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47644126 163 + 47698779 GGAGGA--------------GTGAATATGTCTGCTGCCACCAACTC-TGCTAGCAACTGGTCCGG---------------AGTCTGGTCTTCCCA--GACTGGCTTC-CCTTCTCCAAAGCTGCTGTCCACTCATGCTCTCCCCT-----------------------CAAGAGCTAATGA--------------GGAGAGTCTGAGGGTCTGGCAAAGGGGA---------GGGGACCCTT---------------------- i canFam3.chr24 C 0 C 0 e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911179 237 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=540204.000000 s hg38.chr20_KI270870v1_alt 156298 42 + 183433 GAACCCTGGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTC s panTro5.chr20 66491726 42 + 66533130 GAACCCTGGGTCCCACATCTTAAGAAGTGTGGGTGTCAGCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159195 42 + 62195757 GAACCCTGGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545433 42 - 578057 GAACCCTGGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067050 42 - 110113093 GAACCCTGGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806419 42 - 92844088 GAACCCTGGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471945 42 + 96509753 GAACCCTGGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942001 42 - 16982598 GAACCCTCGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744057 42 - 3785965 GAACCCTGGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334131 42 - 90373283 GAACCCTGGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134688 42 - 179258 GAACCCTGGGTCCCACATCCTAAGAAGTGTGGGTGTCAGCTC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90422 42 + 372756 GAATGCTAGGTCCCACATTCTAGGAAGTGTGGGTGTCAACTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323326 41 + 16356641 GAGCCCTAGGTTCCACATCCTAGG-AGTGTGGGTGTCAGCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194638 41 + 1231380 GAACCCTAGGTCCCACATCCTAGGAAGTGTGGGTGTCAG-TC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2725975 42 + 11732439 GAACCCTAGGCCCCACATCCTAGGAAGTGTGGGCGTCAGCTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56911416 42 + 57149010 GAACCCTGGGTCCCACACCCTAAGAAGTGTGGGTGTCAGCTC i micMur3.chr18 I 237 I 170 s proCoq1.NW_012150197v1 1902250 42 - 2029793 GAACCCTGGGTCCCACACCCTAAGAAGTGTGAGTGTCAGCTC i proCoq1.NW_012150197v1 C 0 I 3 s otoGar3.GL873542 22889505 40 + 22939663 GAACCATGGGTTCTACATA--GAGAAGTGTATGTGGCAGCTC i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181833403 28 + 182113224 AGATCTTGGGTCCCATCTACTAA-AAGTG------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47644289 36 + 47698779 GAACCCTAGGACTCACAGCTTAATAAATGTTGGGGT------ i canFam3.chr24 C 0 C 0 e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=551326.000000 s hg38.chr20_KI270870v1_alt 156340 51 + 183433 AAGGCACTCCCACCTCAGGTGTGCTGTGGACAGGGCTCTGGGCCCTGGGTC s panTro5.chr20 66491768 51 + 66533130 AAGGCACTCCCACCTCAGGTGTGCTGTGGACAGGGCTCTGGGCCCTGGGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159237 51 + 62195757 AAGGCACTCCCACCTCAGGTGTGCTGTGGACAGGGCTCTGGGCCCTGGGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545475 51 - 578057 AAGGCACTCCCACCTCAGGTGTGCTGTGGACAGGGCTCTGGGCCCTGGGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067092 51 - 110113093 AAGGCACTCCCACCTCAGGTGTCCTGTGGACAGGGCTCTGGGCCCTGGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806461 51 - 92844088 AAGGCACTCCCACCTCAGGTTTCCTGTGGACAGGGCTCTGGGCCCTGGGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96471987 51 + 96509753 AAGGCACTCCCACCTCAGGTTTCCTGTGGACAGGGCTCTGGGCCCTGGGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942043 51 - 16982598 GAGGCACTCCCACCTCAGGTTTCCTGTGGACAGGGCTCTGGGCCCTGGGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744099 51 - 3785965 AAGGCACTCCCACCTCAGGTTTCCTGTGGACAGGGCTCTGGGCCCTGGGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334173 51 - 90373283 AAGGCACTCCCACCTCAGGTTTCCTGTGGACAGGGCTCTGGGCCCTGGGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134730 51 - 179258 AAGGCACTCCCACCTCAGGTTTCCTGTGGACAGGGCTCTGGGCCCTGGGTC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90464 51 + 372756 AAGGCATTCCCACCTCAGGTGTCTTGTGGACAGGGCTCTGGGCCCTGAGTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323367 51 + 16356641 GAGGCACTCCCACCTCAGGTGTCCTGTGGACAGGGCTCTGGGCCCTGAGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194679 51 + 1231380 AAGGCACTCCCGCCTCAGGTGTCCTGTGGACAGGGCTCTGGGCCCTGAGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726017 51 + 11732439 AAGGCACTCCCACCTCAGGTGTCCTGTGGACAGGGCTCTGGGCCCTGAGTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1902295 50 - 2029793 AGGGTACTTCCCCCTCAAGTGTCCCATGGACAGACCTCTGGGTCCTG-GTC i proCoq1.NW_012150197v1 I 3 C 0 s otoGar3.GL873542 22889548 50 + 22939663 AGAGCACTTTCTCCTTAGATGTCCCATGGACAAACCTCTGGGCTCTG-GTC i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181833431 28 + 182113224 -------TCCCAACCTAGGCTTCTT-TGTATATGGC--------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47644325 44 + 47698779 -GGGGGCTcccagttgag------taagcatctgactcttggtcttggctc i canFam3.chr24 C 0 I 563 e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911458 170 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=225926.000000 s hg38.chr20_KI270870v1_alt 156391 23 + 183433 TGACACCACTTCTTTGTGAGGAC s panTro5.chr20 66491819 23 + 66533130 TGACACCACTTCTTTGTGAGGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159288 23 + 62195757 TGACACCACTTCTTTGTGAGGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545526 23 - 578057 TGACACCACTTCTTTGTGAGGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067143 23 - 110113093 TGACACCACTTCTTTGTGAGGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806512 23 - 92844088 TGACCCCACTTCTCTGTGAGGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472038 23 + 96509753 TGACCCCACTTCTCTGTGAGGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942094 23 - 16982598 TGACCCCACTTCTCTGTGAGGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744150 23 - 3785965 TGACCCCACTTCTCTGTGAGGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334224 23 - 90373283 TGACCCCACTTCTCTGTGAGGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134781 23 - 179258 TGACCCCACTTCTCTGTGAGGAC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90515 22 + 372756 TGACACCTCTTCTCTGTGAGGa- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323418 22 + 16356641 TGACACCACTTCTCTGTGAGGa- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194730 22 + 1231380 TGACACCACTTCTCTGTGAGGA- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726068 22 + 11732439 TGACACCGCTTCTCTGTGAGGA- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1902345 23 - 2029793 TGACACCCCCTCTTTGTAAGGAC i proCoq1.NW_012150197v1 C 0 I 139 s otoGar3.GL873542 22889598 23 + 22939663 TGATATCACTTCTTTGTAAGGGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181833459 11 + 182113224 -----------CTTTATAAGGC- i mm10.chr2 C 0 C 0 e canFam3.chr24 47644369 563 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911458 170 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=352451.000000 s hg38.chr20_KI270870v1_alt 156414 38 + 183433 CCtgtattagccagggtccccagag-aaacagaaccaat s panTro5.chr20 66491842 38 + 66533130 CCCgtattagccagggtccccagag-aaacagaaccaat i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159311 38 + 62195757 CCCgtattagccagggtccccagag-aaacagaaccaat i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545549 38 - 578057 CCtgtattagccagggtccccagag-aaacagaaccaac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067166 38 - 110113093 CCtgtattagccagggtccccagag-aaacagaaccaat i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806535 38 - 92844088 CCtgtgttagccagggtccccaggg-aaacagaaccaat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472061 38 + 96509753 CCtgtgttagccagggtccccaggg-aaacagaaccaat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942117 38 - 16982598 CCtgtgttagccagggtccccagag-aaacagaaccaat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744173 38 - 3785965 CCtgtgttagccagggtccccagag-aaacagaaccaat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334247 38 - 90373283 CCtgtgttagccagggtccccagag-aaacagaaccaat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134804 38 - 179258 CCtgtgttagccagggtccccagag-aaacagaaccaat i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90537 38 + 372756 cctgtattatacagggtccccagag-aaacagaaccaat i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323440 39 + 16356641 cctgtattagccagggtccccagagaaaacggaaccaac i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194752 38 + 1231380 CCtgtatgagccagggtccccagag-aaacagcaccaac i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726090 34 + 11732439 CCTGTATTAGCCAGCGTCCCC-----AAACAGAACCAAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22889621 38 + 22939663 CCTTtattagccagggtctccagag-aaacagaacACAC i otoGar3.GL873542 C 0 I 2223 s mm10.chr2 181833470 23 + 182113224 TTTATGTCAGC--AGCATTTCAGAT-------------- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1902368 139 - 2029793 I e canFam3.chr24 47644369 563 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911458 170 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=16080.000000 s hg38.chr20_KI270870v1_alt 156452 5 + 183433 ag------------------------------ggg s panTro5.chr20 66491880 5 + 66533130 ag------------------------------ggg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159349 5 + 62195757 ag------------------------------ggg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545587 5 - 578057 ag------------------------------ggg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067204 5 - 110113093 ag------------------------------ggg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806573 5 - 92844088 ag------------------------------ggg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472099 5 + 96509753 ag------------------------------ggg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942155 35 - 16982598 agCAGCAGCTGCCCTACATCCTTACATATGTAAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744211 5 - 3785965 ag------------------------------ggg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334285 5 - 90373283 ag------------------------------ggg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134842 5 - 179258 ag------------------------------ggg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90575 5 + 372756 gg------------------------------gaa i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323479 5 + 16356641 ag------------------------------ggg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194790 5 + 1231380 ag------------------------------ggt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726124 5 + 11732439 AG------------------------------GGG i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181833493 4 + 182113224 AT------------------------------GA- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1902368 139 - 2029793 I e canFam3.chr24 47644369 563 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911458 170 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e otoGar3.GL873542 22889659 2223 + 22939663 I a score=359518.000000 s hg38.chr20_KI270870v1_alt 156457 37 + 183433 atacatatgtatCTCTTACATAGG----CCCAGCAAAGTTG s panTro5.chr20 66491885 37 + 66533130 atacatatgtatCTCTTACATAGG----CCCAGCAAAGTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159354 37 + 62195757 atacatatgtatCTCTTACATAGG----CCCAGCAAAGTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545592 37 - 578057 atacatatgtatCTCTTACATAGG----CCCAGCAAAGTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067209 37 - 110113093 atacatatgtatCTCTTACATAGG----CCCAGCAAAGTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806578 37 - 92844088 atacataTGTACCTCTTACATAGG----CCCAGCAAAGTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472104 37 + 96509753 atacataTGTACCTCTTACATAGG----CCCAGCAAAGTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942190 37 - 16982598 ATACATATGTACCTCTTACATAGG----CCCAGCAAAGTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744216 37 - 3785965 atacataTGTACCTCTTACGTAGG----CCCAGCAAAGTTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334290 37 - 90373283 agacatatgtaCCTCTTATATAGA----CCCAGCCAAGGTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134847 37 - 179258 atacataTGTACCTCTTACATAGG----CCCAGCAAAGTTG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90580 36 + 372756 -tacgtatgtGTCTCCTACATAGA----CCCAGCAAAGTCG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323484 35 + 16356641 --atgtatgtGTCTCCTATATAGA----CCCAGCAAAGCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194795 37 + 1231380 atacgtaTGTGTCTCCTCGATAGG----CCCAGCAAAGCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726129 37 + 11732439 ATACGTATGTGTCTCCTACATAGA----CCCAGCAGAGTTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22891882 41 + 22939663 atacatatgtatctcctatatacgtttacctaGCCAAGCTG i otoGar3.GL873542 I 2223 C 0 s mm10.chr2 181833497 35 + 182113224 --ACACATATAGTCCTTATATAGA----CCCAGCCAAAGTG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1902368 139 - 2029793 I e canFam3.chr24 47644369 563 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911458 170 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=404292.000000 s hg38.chr20_KI270870v1_alt 156494 49 + 183433 ATATAAAATTGGCTGCTGCAGACCTCTTCCCTATGCCCACG-----------------TAA-----AGT-GG s panTro5.chr20 66491922 49 + 66533130 ATATCAAATGGGCTGCTGCAGACCTCTTCCCTATGCCCACG-----------------TAA-----AGT-GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159391 49 + 62195757 ATATCAAATGGGCTGCTGCAGACCTCTTCCCTATGCCCACG-----------------TAA-----AGT-GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545629 49 - 578057 ATATAAAATTGGCTGCTGCAGACCTCTTCCCTATGCTCACG-----------------TAA-----AGT-GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067246 50 - 110113093 ATATAAAATTGGCTGTTGCAGACCCCTTTCCTATGCCCACA-----------------TAA-----AGTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806615 49 - 92844088 ATATAAAATTGGCCATCGCAGACCTCTTCCCTATGCCCACA-----------------TAA-----AGT-GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472141 49 + 96509753 ATATAAAATTGGCCATCGCAGACCTCTTCCCTATGCCCACA-----------------TAA-----AGT-GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942227 49 - 16982598 ATATAAAATTGGCCATCGCAGACCTCTTCCCTATGCCCACA-----------------TAA-----AGT-GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744253 49 - 3785965 ATATAAAATTGGCCATCGCAGACCTCTTCCCTAGGCCCACA-----------------TAA-----AGT-GG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334327 49 - 90373283 ATATAAAATCGGCCATCGCAGGCCTCTTCCCTATGCCCACA-----------------TAA-----AGT-GG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134884 49 - 179258 ATATAAAATTGGCCATCGCAGACCTCTTCCCTATGCCCACA-----------------TAA-----AGT-GG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90616 37 + 372756 ACAT------------CGCAGACCTCTTCCCTATGCCTACA-----------------TAA-----AGT-GG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323519 37 + 16356641 ATGT------------CACAGACCTCTTCCCTATGCCCACA-----------------TAA-----AGT-CG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194832 37 + 1231380 ATGT------------CACAGACCCCTTCCCTATGCCCACG-----------------TGA-----AGT-GG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726166 37 + 11732439 ACGT------------CGCAGACCTCTTCCCTATGCCCACA-----------------TAA-----AGT-GG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22891923 54 + 22939663 ACCTTAAATTGACCATCACAGACCCCGTCCCTGTGTCCACT-----------------TAAACCAGAGT-GG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181833532 48 + 182113224 ACACAAAATTGATACTTGCAAACAT-TTCCCAGGGCCCATG-----------------TAA-----AAC-TA i mm10.chr2 C 0 I 1 s canFam3.chr24 47644932 66 + 47698779 acataaaataaaccatcacaGACCTTTTCCCTGTGCCCATGCATTACTAGCTTCTCATTAA-----AGT-GG i canFam3.chr24 I 563 C 0 e proCoq1.NW_012150197v1 1902368 139 - 2029793 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911458 170 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=346014.000000 s hg38.chr20_KI270870v1_alt 156543 31 + 183433 TTTGTTTTAAGATGAGAAATAATTTTTAAGA s panTro5.chr20 66491971 31 + 66533130 TTTGTTTTAAGATGAGAAATAATTTTTAAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159440 31 + 62195757 TTTGTTTTAAGATGAGAAATAATTTTTAAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545678 31 - 578057 TTTGTTTTAAGATGAGAAATAATTTTTAAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067296 31 - 110113093 TTTGTTTTCAGATGAGAAATAATTTTTAAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806664 30 - 92844088 -TCATTTTAAGATGAGAAATAATTTTTGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472190 30 + 96509753 -TCATTTTAAGATGAGAAATAATTTTTGAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942276 30 - 16982598 -TCATTTTAAGATGAGAAATAATTTTTGAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744302 30 - 3785965 -TCATTTTAAGATGAGAAATAATTTTTGAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334376 30 - 90373283 -TCGTTTCAAGATGAGAAATAATTTTTGAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134933 30 - 179258 -TCATTTTAAGATGAGAAATAATTTTTGAGA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90653 31 + 372756 TTTGTTTTAAGATAAGAAATAATTTTTAAGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323556 31 + 16356641 TTTGTTTTAAGATAAGAAATAATTTTTAAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194869 31 + 1231380 TTTGTTTGAAGATAAGAAATAATTTTTAAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726203 31 + 11732439 TTTGTTTTAAGATAAGGAATAATTTTTAAGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56911628 31 + 57149010 TTTGTTTTAAGATGAGAAATCATTTTTAAGA i micMur3.chr18 I 170 I 6 s otoGar3.GL873542 22891977 30 + 22939663 TTTGTTTC-AGCTGAGAAATGATTTTTTAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181833581 27 + 182113224 TTCTTTTT----TTAAAAAATAGTGTTAAGA i mm10.chr2 I 1 C 0 s canFam3.chr24 47644998 31 + 47698779 TTTGTTTTAACACGAGAAATTATGTTTTCGC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1902368 139 - 2029793 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=16479.000000 s hg38.chr20_KI270870v1_alt 156574 12 + 183433 CAGTTGGGAATG- s panTro5.chr20 66492002 12 + 66533130 CGGTTGGGAATG- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159471 12 + 62195757 CGGTTGGGAATG- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545709 6 - 578057 ------ATCATT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067327 6 - 110113093 ------CTCATT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806694 6 - 92844088 ------ATCATT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472220 6 + 96509753 ------ATCATT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942306 6 - 16982598 ------ATCATT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744332 6 - 3785965 ------ATCATT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334406 6 - 90373283 ------ATCATT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134963 6 - 179258 ------ATCATT- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90684 6 + 372756 ------ATCATT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323587 6 + 16356641 ------ATCATT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194900 6 + 1231380 ------ATCATT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726234 6 + 11732439 ------ATCATT- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22892007 6 + 22939663 ------GTCTTT- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181833608 6 + 182113224 ------CTCTTT- i mm10.chr2 C 0 I 1 s canFam3.chr24 47645029 7 + 47698779 ------CTCCCTT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1902368 139 - 2029793 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911659 6 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=1138578.000000 s hg38.chr20_KI270870v1_alt 156586 89 + 183433 CCCAACCGTTTTATGTACGTGAATACATTCGAGTTCACCGGTATTTTCAGATCAGCATCAAGCTGCTGTCACCTGTGTGGCATGAATAG s panTro5.chr20 66492014 89 + 66533130 CCCAACCATTTTATGTACGTGAATACATTCGAGTTCACCGGTATTTTCAGATCAGCATCAAACTGCTGTCACCTGTGTGGCATGAATAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159483 89 + 62195757 CCCAACCGTTTTATGTACGTGAATACATTCGAGTTCACCGGTATTTTCAGATCAGCATCAAACTGCTGTCACCTGTGTGGCATGAATAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545715 89 - 578057 CCCAACCGTTTTATGTACGTGAATACATTCGAGTTCACCGGTATTTTCAGATCAGCATCAAAGTGCTGTCACCTGTGTGGCATGAATAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067333 89 - 110113093 CCCAACCATTTTATGTATGTGAATACATTTGAGTTCACCGGTATTTTCAGATCAGCATCACACTGCTGTCACCTGTGTGGCATGAATAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806700 89 - 92844088 CCCAACCATTTTATGTATGTGAATACACTTGAGTTTACCGGTATTTTCAGATCAGCATCAAACTGCTGTCACTTGTGTGGCGTGAATCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472226 89 + 96509753 CCCAACCATTTTATGTATGTGAATACACTTGAGTTTACCGGTATTTTCAGATCAGCATCAAACTGCTGTCACTTGTGTGGCGTGAATCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942312 89 - 16982598 CCCAACCATTTTATGTATGTGAATACACTTGAGTTTACCGGTATTTTCAGATCAGCATCAAACTGCTGTCACTTGTGTGGCGTGAATCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744338 89 - 3785965 CCCAACCATTTTATGTATGTGAATACACTTGAGTTTACCGGTATTTTCAGATCAGTATCAAACTGCTGTCACTTGTGTGGCATGAATCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334412 89 - 90373283 CCCAACCATTTTATTTATGTGAATACACTTGAGTTTACCGGTGTTTTCAGATCAGCATCAAACTGCTGTCACTTGTGTGGCATGAATCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 134969 89 - 179258 CCCAACCATTTTATGTATGTGAATACACTTGAGTTTACCGGTATTTTCAGATCAGCATCAAACTGCTGTCACTTGTGTGGCATGAATCG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90690 89 + 372756 TCCAACCGTTTTATACATGTGAATATATTTGAGTTCACCGGTATTTTCAAATCAACATCAAACTGCTGTCACCTGTGTGGCATGAATAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323593 89 + 16356641 TCCAACCATTTTATACATGTGAATACATTTGAGTTCACCGGTATTTTCCGATCAACATCAAACTGCGGTCACCTGTGTGGCATGAATAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194906 89 + 1231380 TCCAACCATCTTATACATGTGAATACATTTGAGTTCACCGGTATTTTCAGATCAACATCAAACTGCTGTCACCTGTGTGGCATGAATAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726240 89 + 11732439 TCCAACCATTTTATACATGTGAATACATTTGAGTTCACTGGTATTTTCAGATCAACATCAAACTGCTGTCACCTGTGTGGCATGAATAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56911665 89 + 57149010 CCCAACCATTGTATGAATGTGAACACATTTGAGTTAATCGATATTTTCAGATCAACGTCACACTGCTGTCCCCCGTGTGGTATGAATAG i micMur3.chr18 I 6 C 0 s proCoq1.NW_012150197v1 1902507 89 - 2029793 CCCAACCATTGTATGAACGTGCATACATTTGAGTTGATCAGTATTTTCAGATCAACATCACACTGCTGTTGCCTGTGTGGTGTGAATAG i proCoq1.NW_012150197v1 I 139 I 367 s otoGar3.GL873542 22892013 82 + 22939663 CCCAATCATTTCATGAATGCTAATACATTTGAATTGATCAGTATTTTCAGATCAACACCAAACTGCTGTCATCTG-------TGAATAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181833615 64 + 182113224 CCCAACTATTCCACACATGT-----------AGTT---CTATATCTTCATATT---------CTTGTGGTAGCTATGTAG--TAAACAG i mm10.chr2 I 1 C 0 s canFam3.chr24 47645036 88 + 47698779 CTCAATCATTTTACATATATGAATACACTGGAGTTCACCGATTCTTTCTGAT-AACATCAAACTGCACTCACCTGCATAGCAGGAGTAG i canFam3.chr24 C 0 C 0 e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=17100.000000 s hg38.chr20_KI270870v1_alt 156675 1 + 183433 C s panTro5.chr20 66492103 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159572 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545804 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067422 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806789 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472315 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942401 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744427 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334501 1 - 90373283 C i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135058 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90779 1 + 372756 C i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323682 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194995 1 + 1231380 C i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726329 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56911754 1 + 57149010 C i micMur3.chr18 C 0 I 97 s otoGar3.GL873542 22892095 1 + 22939663 C i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181833679 1 + 182113224 C i mm10.chr2 C 0 C 0 s canFam3.chr24 47645124 1 + 47698779 C i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=788062.000000 s hg38.chr20_KI270870v1_alt 156676 88 + 183433 ACAGAAGCTTTGACG-GATGTCGGAAAACAGACTGGCTTGTTCCA--CTCTGGCTACGG-----------------GGCTTAAGATGAGGAAGAAGGACT--------TCCCC---TTC s panTro5.chr20 66492104 88 + 66533130 ACAGAAGCTTTGACG-GATGTCGGAAAACAGACTGGCTTGTTCCA--CTCTGGCTACGG-----------------GGCTTAAGATGAGGAAGAAGGACT--------TCCCC---TTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159573 88 + 62195757 ACAGAAGCTTTGACG-GATGTCGGAAAACAGACTGGCTTGTTCCA--CTCTGGCTACGG-----------------GGCTTAAGATGAGGAAGAAGGACT--------TCCCC---TTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545805 88 - 578057 ACAGAAGCTTTGACG-GACGTCGGAAAACAGACTGGCTTGTTCCA--CTCTGGCTACGG-----------------GGCTTAAAATGAGGAAGAAGGACT--------TCCCC---TTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067423 88 - 110113093 ACAGAAGCCTTGACA-GACGTCGGAAAACAGACTGGTCCATTCCG--CTCTGGCTACGG-----------------GGCTTAAAATGAGGAAGAACGACT--------TCCCC---TTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806790 89 - 92844088 AGCAAAGCCTTGACA-GATGTCGGAAAACAGACTGGCTCATTCCATTCTCTGGCTACGG-----------------GGCTTAAAATGA-GAAGAACGACT--------TCCCC---TTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472316 89 + 96509753 AGCAAAGCCTTGACA-GATGTCGGAAAACAGACTGGCTCATTCCATTCTCTGGCTACGG-----------------GGCTTAAAATGA-GAAGAACGACT--------TCCCC---TTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942402 89 - 16982598 AGCAAAGCCTTGACA-GATGTCGGAAAACAGACTGGCTCATTCCATTCTCTGGCTACGG-----------------GGCTTAAAATGA-GAAGAACGACT--------TCCCC---TTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744428 89 - 3785965 AGCAAAGCCTTGACA-GATGTCGGAAAACAGACTGGCTCATTCCATTCTCTGGCTACGG-----------------GGCTTAAAATGA-GAAGAACGACT--------TCCCC---TTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334502 89 - 90373283 AGCAAAGCCTTGACA-GATGTCGGAAAACAGACTGGCTCATTCCATTCTCTGGCTACGG-----------------GGCTTAACATGA-GAAGAACGACT--------TCCCC---TTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135059 89 - 179258 AGCAAAGCCTTGACA-GATGTCGGAAAACAGACTGGCTCATTCCATTCTCTGGCTACGG-----------------GGCTTAAAATGA-GAAGAACGACT--------TCCCC---TTC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90780 90 + 372756 AGAGAAGCCTTGACA-GATGTCTGAAAACAGACCAGCTCATTCCACTCTCTGGCTATGG-----------------GGATTAACATGAGGAAGAACACCT--------TCTCC---TTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323683 90 + 16356641 AGAGAAGCCTTGACA-GATGTCTGAAAACAGACTGGCTCATTCCACTCTCTGGCTACAG-----------------GGATTAAAATGAGAAAGGAGGACT--------TCCCC---TTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1194996 88 + 1231380 AGAGAAGCCTTGACA-GGTGTCTGAAAACAGACGGGCTCATTCCA--CTCTGGCTGCGG-----------------GGATTAAAATGAGGAAGAACAACT--------TCCCC---TTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726330 90 + 11732439 AGCGAAGCCTTGACA-GATGTCTGAAAACAGACTGGCTCATTCCACGCCCTGGCTACGG-----------------GGATTAGAATGAGGAAGAACGACT--------TCCCC---TTC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22892096 90 + 22939663 -GAGCATTCTTGGTATGCCCTCTGAAAATTGAGTGGTTCATTTCATTCCCTGGCTTTAG-----------------GGCTTAAAAGGAGGAAGAACTACT--------TTCTC---TCC i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181833680 87 + 182113224 AGAGAGACTTTGGTA-CCTGTCTGAAGACT-----ACTAATTCTATT------CTAAAA-----------------AGCCTAAAATGAGGAAGAAAATTCCTTCCTTATTCCC---TTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47645125 104 + 47698779 AGAGAAGC-TCGAGG-CCAGTCTGAAAAC----TGGCTCATTTCA-TTGCTGGCTACAGAATGCCTAGTCCTTGATGGCCCACCACGAGGAAGAACTATT--------TCTCCAGTTTC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911755 97 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=112946.000000 s hg38.chr20_KI270870v1_alt 156764 9 + 183433 CAGATGACC s panTro5.chr20 66492192 9 + 66533130 CAGATGACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159661 9 + 62195757 CTGATGACC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545893 9 - 578057 CAGATGACC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067511 9 - 110113093 CAGATGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806879 9 - 92844088 CAGATGACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472405 9 + 96509753 CAGATGACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942491 9 - 16982598 CAGATGACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744517 9 - 3785965 CAGATGACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334591 9 - 90373283 CAGATGACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135148 9 - 179258 CAGATGACC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90870 9 + 372756 CGGATGACC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323773 9 + 16356641 CAGATGACC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195084 9 + 1231380 CAGGTGACC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726420 9 + 11732439 CGGATGACC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56911852 9 + 57149010 CAGATGACC i micMur3.chr18 I 97 C 0 s otoGar3.GL873542 22892189 9 + 22939663 TCAACCACC i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181833767 9 + 182113224 AAGATGACC i mm10.chr2 C 0 I 198 s canFam3.chr24 47645229 9 + 47698779 TGGAGGACC i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=618337.000000 s hg38.chr20_KI270870v1_alt 156773 53 + 183433 CCGTTTGTCTC----CTCCCAAGACAGCAGCTGTTCAGCG--GTGACACCTTGCGGTAA s panTro5.chr20 66492201 53 + 66533130 CAGTTTGTCTC----CTCCCAAGACAGCAGCTGTGCAGCG--GTGACACCTTGCGGTAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159670 53 + 62195757 CAGTTTGTCTC----CTCCCAAGACAGCAGCTGTGCAGCG--GTGACACCTTGCGGTAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545902 53 - 578057 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCCGCG--GTGATACCTTGCGGTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067520 53 - 110113093 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCAGCG--GTGACACCTTGCGGTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806888 53 - 92844088 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCAGCG--GTGACACCTTGCAGTAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472414 53 + 96509753 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCAGCG--GTGACACCTTGCAGTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942500 53 - 16982598 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCAGCG--GTGACACCTTGCAGTAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744526 53 - 3785965 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCAGCG--GTGACACCTTGCAGTAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334600 53 - 90373283 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCAGCG--GTGACACCTTGCGGTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135157 53 - 179258 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCAGCG--GTGACACCTTGCAGTAA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90879 53 + 372756 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCAGCA--GTGACACCTGGTGGTAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323782 53 + 16356641 CAGTTTGTCTC----CTCCCAAGAGAGCAGCTGTGCAGCA--GTGACACCTGCTGGTAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195093 53 + 1231380 CAGTTTGTCCC----CTGCCAAGAGCGCAGCTGTGCAGCA--GTGACACCTGGCGGTAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726429 53 + 11732439 CAGTTTGTCTC----CTCCCCGGAGAGCAGCTGTGCAGCA--GTGACACCTGGTGGTAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56911861 53 + 57149010 TAGTTTGTCTC----CTCCCAACAGAGCAGCTGTGCAGTG--GCGACACCTTGTGGTAA i micMur3.chr18 C 0 I 172 s otoGar3.GL873542 22892198 53 + 22939663 TGGTTTGTCCCCAGACTCC------AGCAGCCGTGCAGTGTTGCGACACCTTGTGGTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181833974 53 + 182113224 TATTTTGGCTG----TTTCTTTCAGCTCAGCTGCACAGTG--GTGATGTCTTGTGGCAG i mm10.chr2 I 198 C 0 s canFam3.chr24 47645238 53 + 47698779 GAGTCCGGAGC----CTCTCCACCCAACAGCTATGCAGGG--GCGACGCCTGGTGGTCA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=17382.000000 s hg38.chr20_KI270870v1_alt 156826 2 + 183433 AT s panTro5.chr20 66492254 2 + 66533130 AT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159723 2 + 62195757 AT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545955 2 - 578057 AT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067573 2 - 110113093 AT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806941 2 - 92844088 AT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472467 2 + 96509753 AT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942553 2 - 16982598 AT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744579 2 - 3785965 AT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334653 2 - 90373283 AT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135210 2 - 179258 AT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90932 2 + 372756 AT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323835 2 + 16356641 AT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195146 2 + 1231380 AT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726482 2 + 11732439 AG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22892251 2 + 22939663 TA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181834027 2 + 182113224 AT i mm10.chr2 C 0 C 0 s canFam3.chr24 47645291 2 + 47698779 AT i canFam3.chr24 C 0 I 1286 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=12376.000000 s hg38.chr20_KI270870v1_alt 156828 1 + 183433 T s panTro5.chr20 66492256 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159725 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545957 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067575 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806943 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472469 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942555 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744581 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334655 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135212 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90934 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323837 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195148 1 + 1231380 T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726484 1 + 11732439 T i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22892253 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181834029 1 + 182113224 T i mm10.chr2 C 0 I 51 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=79985.000000 s hg38.chr20_KI270870v1_alt 156829 13 + 183433 CCTCATATGAGcc s panTro5.chr20 66492257 11 + 66533130 CCTCATATGAG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159726 11 + 62195757 CCTCATATGAG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545958 12 - 578057 CCTCATATGAG-C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067576 11 - 110113093 CCTCATATGAG-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806944 13 - 92844088 CCTCATATGAGCG i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96472470 13 + 96509753 CCTCATATGAGCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942556 13 - 16982598 CCTCATATGAGCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744582 13 - 3785965 CCTCATATGAGCG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334656 13 - 90373283 CCTCATATGAGCG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135213 13 - 179258 CCTCATATGAGCG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90935 13 + 372756 CCTCATATCAGCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323838 13 + 16356641 CCTCATGTGAGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195149 13 + 1231380 CCTCACATCAGCC i cebCap1.NW_016107870v1 C 0 I 100 s aotNan1.NW_018500483v1 2726485 13 + 11732439 CCTCATATGCGCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22892254 13 + 22939663 CTTGTCATTGGCC i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834030 51 + 182113224 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=43098.000000 s hg38.chr20_KI270870v1_alt 156842 15 + 183433 ccccccccgcccccc s panTro5.chr20 66492268 8 + 66533130 -------CGCCCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159737 8 + 62195757 -------CGCCCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545970 15 - 578057 GCCCCCCCGCCCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067587 4 - 110113093 -------CACC---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806959 15 - 92844088 CCCCCCCCGCCCCCT i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96472483 15 + 96509753 CCCCCCCCGCCCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942569 15 - 16982598 CCCCCCCCGCCCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744595 15 - 3785965 CCCCCCCCGCCCCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334669 15 - 90373283 CCCCCCCCGCCCCCC i chlSab2.chr2 C 0 I 3 s manLeu1.NW_012101652v1 135226 15 - 179258 CCCCCCCCGCCCCCT i manLeu1.NW_012101652v1 C 0 I 1 s calJac3.chrUn_GL286459 90948 15 + 372756 TCCACCCTGGCTCTT i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16323851 15 + 16356641 TCCACCTGGGCTCCT i saiBol1.JH378156 C 0 I 1 s aotNan1.NW_018500483v1 2726498 15 + 11732439 TCCACCCTGGCTCCT i aotNan1.NW_018500483v1 C 0 I 12 s otoGar3.GL873542 22892267 4 + 22939663 ------GTGT----- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834030 51 + 182113224 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1195162 100 + 1231380 I a score=5114.000000 s hg38.chr20_KI270870v1_alt 156857 18 + 183433 gcccaccccagccacccA s panTro5.chr20 66492276 18 + 66533130 GCCCACCCCAGCCACCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159745 18 + 62195757 GCCCACCCCAGCCACCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545985 11 - 578057 GCCCACCCCAG------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067591 6 - 110113093 -----CCCCAG------- i nomLeu3.chr13 C 0 C 0 s calJac3.chrUn_GL286459 90964 11 + 372756 GCATAGACTGG------- i calJac3.chrUn_GL286459 I 1 C 0 s saiBol1.JH378156 16323867 11 + 16356641 GCACAGACTGG------- i saiBol1.JH378156 I 1 C 0 s otoGar3.GL873542 22892271 13 + 22939663 -----CCCCAGCCACACA i otoGar3.GL873542 C 0 I 34 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e cerAty1.NW_012001373v1 3744610 0 - 3785965 C e colAng1.NW_012114444v1 5608556 5 - 5823884 I e chlSab2.chr2 90334684 3 - 90373283 I e mm10.chr2 181834030 51 + 182113224 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e manLeu1.NW_012101652v1 135241 1 - 179258 I e macNem1.NW_012014244v1 16942584 0 - 16982598 C e cebCap1.NW_016107870v1 1195162 100 + 1231380 I e aotNan1.NW_018500483v1 2726513 12 + 11732439 I e rheMac8.chr10 92806974 0 - 92844088 C e macFas5.chr10 96472498 0 + 96509753 C a score=-12295.000000 s hg38.chr20_KI270870v1_alt 156875 47 + 183433 GAGGTGCGAGAGACCAGGCGTAAAGGTAAATTCCTCATGTGAGC-----ACC s panTro5.chr20 66492294 47 + 66533130 GAGGTGAGAGAGACCAGGCATAAAGGTAAATTCCTCATATGAGC-----ACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159763 47 + 62195757 GAGGTGAGAGAGACCAGGCATAAAGGTAAATTCCTCATATGAGC-----ACC i panPan2.chr20 C 0 C 0 s rheMac8.chr10 92806974 3 - 92844088 -----------------------------------------AGC-------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472498 3 + 96509753 -----------------------------------------AGC-------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942584 3 - 16982598 -----------------------------------------AGC-------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744610 3 - 3785965 -----------------------------------------AGC-------- i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 135242 7 - 179258 ------------------------------------------GCCCTGA--- i manLeu1.NW_012101652v1 I 1 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e chlSab2.chr2 90334684 3 - 90373283 I e mm10.chr2 181834030 51 + 182113224 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e gorGor5.CYUI01015848v1 545996 0 - 578057 C e saiBol1.JH378156 16323878 0 + 16356641 C e cebCap1.NW_016107870v1 1195162 100 + 1231380 I e calJac3.chrUn_GL286459 90975 0 + 372756 C e aotNan1.NW_018500483v1 2726513 12 + 11732439 I e nomLeu3.chr13 110067597 0 - 110113093 C e otoGar3.GL873542 22892284 34 + 22939663 I a score=1167.000000 s hg38.chr20_KI270870v1_alt 156922 10 + 183433 CCCCGCCCAC s panTro5.chr20 66492341 10 + 66533130 CCCCGCCCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159810 9 + 62195757 CCCCG-CCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 545996 4 - 578057 ------CCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067597 4 - 110113093 ------CCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806977 5 - 92844088 -----CCCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472501 5 + 96509753 -----CCCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942587 5 - 16982598 -----CCCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744613 5 - 3785965 -----CCCGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334687 6 - 90373283 ----CCCCGA i chlSab2.chr2 I 3 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834030 51 + 182113224 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e manLeu1.NW_012101652v1 135249 0 - 179258 C e saiBol1.JH378156 16323878 0 + 16356641 C e cebCap1.NW_016107870v1 1195162 100 + 1231380 I e calJac3.chrUn_GL286459 90975 0 + 372756 C e aotNan1.NW_018500483v1 2726513 12 + 11732439 I e otoGar3.GL873542 22892284 34 + 22939663 I a score=178857.000000 s hg38.chr20_KI270870v1_alt 156932 22 + 183433 CCGGAGGCGAGAGAGA------CCAGGC s panTro5.chr20 66492351 22 + 66533130 CCGGAGGCGAGAGAGA------CCAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159819 22 + 62195757 CCGGAGGCGAGAGAGA------CCAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546000 22 - 578057 CCAGAGGCGAGAGAGA------CCAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067601 22 - 110113093 CCAGAGGCGAGAGAGA------CCAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92806982 22 - 92844088 CCAGAGGCAAGAGAGA------CCAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472506 22 + 96509753 CCAGAGGCAAGAAAGA------CCAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942592 22 - 16982598 CCAGAGGCAAGAGAGA------CCAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744618 22 - 3785965 CCAGAGGCAAGAGAGA------CCAGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334693 22 - 90373283 CCAAAGGCAAGAGAGA------CCAGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135249 22 - 179258 CCAGAGGCAAGAGAGA------CCAGGC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90975 22 + 372756 CCAGAGGCAAGAGCAA------CCAGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323878 22 + 16356641 CCAGAGGCAAGAGAAA------CCAGGT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2726525 22 + 11732439 CCAGAGGCAAGAGCAA------CCAGGT i aotNan1.NW_018500483v1 I 12 C 0 s otoGar3.GL873542 22892318 28 + 22939663 CCAGAGGCAGATGAGATATCACCCAGGT i otoGar3.GL873542 I 34 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834030 51 + 182113224 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1195162 100 + 1231380 I a score=444977.000000 s hg38.chr20_KI270870v1_alt 156954 61 + 183433 GTAAGGCCATTCCTTAGCAGTGCCGGTCCCCTGCCCCTG--AGGCCCTGACAGAGCCGGCCTG s panTro5.chr20 66492373 61 + 66533130 GTAAGGCCATTCCTTAGCAGTGCCGGTCCCCTGCCCCTG--AGGCCCTGACAGAGCCAGCCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159841 61 + 62195757 GTAAGGCCATTCCTTAGCAGTGCCGGTCCCCTGCCCCTG--AGGCCCTGACAGAGCCAGCCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546022 61 - 578057 GTAAGGCCATTCCTTAGCAGTGCCGGTCCCCTGCCCCTG--CGGCCCTGACAGAGCCAACCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067623 61 - 110113093 CTAAGGCCATTCCTTAGCAGTGCTGGTTCCCTGCCCCTG--CGGCCCTGACAGAGCCAACCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807004 60 - 92844088 GTAAGGCCATTCCCTAGGAGTTCTGG-CCCCTGCCCCTG--CGGCCCTGACAAAGCCAAAGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472528 60 + 96509753 GTAAGGCCATTCCCTAGGAGTTCTGG-CCCCTGCCCCTG--CGGCCCTGACAAAGCCAACCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942614 60 - 16982598 GTAAGGCCATTCCCTAGGAGTTCTGG-CCCCTGCCCCTG--CGGCCCTGACAAAGCCAACCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744640 60 - 3785965 GTAAGGCCATTCCCTAGGAGTTCTGG-CCCCTGCCCCTG--TGGCCCTGACAAAGCCAACCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334715 60 - 90373283 GTAAGGCCATTCCCTAGGAGTTCTGG-CCCCTGCCCCTG--CGGCCCTGACAAAGCCAACCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135271 60 - 179258 GTAAGGCCATTCCCTAGGAGTTCTGG-CCCCTGCCCCTG--TGGCCCTGACAAAGCCAACCTG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 90997 61 + 372756 GTAAGGCCATTCCTCAGGAATGCAGGCCTCCTACCCCTG--AGGCCCTGACAAAGCCAATCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323900 61 + 16356641 GTAAGGCCATTCCTCAGGAATGCAGCCCTCCTGCCCCTG--AGGCCCTGACAAAGCCAACCTG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2726547 60 + 11732439 GTAAGGCCGTTCCTCAGGAACGCAGGCCTCCTGCCCC-G--AGGCTCTGACAAAGCCAACCTG i aotNan1.NW_018500483v1 C 0 I 17 s otoGar3.GL873542 22892346 60 + 22939663 GTAA-CCTATTCCTTAAGAATGCTTC-CCCCAACTCCCGA-CGGCTCTGACAAAGCTGACCAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181834081 62 + 182113224 GTAAGGTTCTTTCTTAGGATTCTTCT-ACCCACCTCCAGGTTGGCACTGATAAAGTCAAATAA i mm10.chr2 I 51 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1195162 100 + 1231380 I a score=64798.000000 s hg38.chr20_KI270870v1_alt 157015 16 + 183433 CATTTCATAAGACCGA s panTro5.chr20 66492434 16 + 66533130 CATTTCATAAGACCGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159902 16 + 62195757 CATTTCATAAGACCGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546083 16 - 578057 CATTTGATAAGACCGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067684 16 - 110113093 CGTTTGATAAGATTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807064 16 - 92844088 TGTTTGATGAGACTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472588 16 + 96509753 TGTTTGATGAGACTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942674 16 - 16982598 TGTTTGATGAGACTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744700 16 - 3785965 TGTTTGATGAGACTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334775 16 - 90373283 TGTTTGATGAGACTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135331 16 - 179258 TGTTTGATGAGACTGT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 91058 16 + 372756 TGTTTGATGCATCTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323961 16 + 16356641 TGTTTGATGCATCTGT i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22892406 13 + 22939663 ---TGTCTAAAGCTGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181834143 10 + 182113224 CATTCAATGT------ i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1195162 100 + 1231380 I e aotNan1.NW_018500483v1 2726607 17 + 11732439 I a score=8666.000000 s hg38.chr20_KI270870v1_alt 157031 1 + 183433 G s panTro5.chr20 66492450 1 + 66533130 G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159918 1 + 62195757 G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546099 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067700 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807080 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472604 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942690 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744716 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334791 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135347 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 91074 1 + 372756 G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323977 1 + 16356641 G i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195262 1 + 1231380 G i cebCap1.NW_016107870v1 I 100 C 0 s mm10.chr2 181834153 1 + 182113224 A i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56911914 172 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e aotNan1.NW_018500483v1 2726607 17 + 11732439 I e otoGar3.GL873542 22892419 0 + 22939663 C a score=23129.000000 s hg38.chr20_KI270870v1_alt 157032 3 + 183433 GGC s panTro5.chr20 66492451 3 + 66533130 GGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159919 3 + 62195757 GGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546100 3 - 578057 GGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067701 3 - 110113093 GGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807081 3 - 92844088 GGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472605 3 + 96509753 GGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942691 3 - 16982598 GGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744717 3 - 3785965 GGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334792 3 - 90373283 GGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135348 3 - 179258 GGT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 91075 3 + 372756 GGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323978 3 + 16356641 GGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195263 3 + 1231380 GGC i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56912086 3 + 57149010 GGC i micMur3.chr18 I 172 C 0 s otoGar3.GL873542 22892419 2 + 22939663 -CC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181834154 3 + 182113224 TGC i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I e aotNan1.NW_018500483v1 2726607 17 + 11732439 I a score=306772.000000 s hg38.chr20_KI270870v1_alt 157035 38 + 183433 AAGT--ATCTCAGAGGCCCAGGACACCTAGAGCGGGCAT----G s panTro5.chr20 66492454 38 + 66533130 AAGT--ATCTCAGAGGCCCAGGACACCTAGAGCGGGCAT----G i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159922 38 + 62195757 AAGT--ATCTCAGAGGCCCAGGACACCTAGAGTGGGCAT----G i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546103 38 - 578057 AAGT--ATCTCAGAGGCCCAGGACACCTAGAGCGGGCAT----G i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067704 38 - 110113093 GAGT--ATCTCAGAGGCCCAGGACACCTGGAGTGGGCCT----G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807084 38 - 92844088 AAGT--ATCTCAGAGGCCCAGGACACCTACAGTGGGTGT----G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472608 38 + 96509753 AAGT--ATCTCAGAGGCCCAGGACACCTACAGTGGGTGT----G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942694 38 - 16982598 AAGT--ATCTCAGAGGCCCAGGACACCTACAGTGGGTGT----G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744720 38 - 3785965 AAGT--ATCTCAGAGGCCCAGCACACCTACAGTGGGTGT----G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334795 38 - 90373283 AAGT--ATCTCAGAGGCCCAGGACACCTACAGTGGGTGT----G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135351 38 - 179258 AAGT--ATCTCAGAGGCCCAGGACACCTACAGTGGGTGT----G i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 91078 38 + 372756 AAGT--ATCTCAGAGGTCCAGGACACCCAGAGTGGGCAT----G i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16323981 42 + 16356641 AAGT--ATCTCAGAGGTCCAGGACACCCAGAGTGGGCGTGAGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195266 38 + 1231380 AGGT--ATCTCAGAGGTCCAGTACACCCAGAGTGGGCGT----G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726624 38 + 11732439 AAGT--ATCTCAGAGGTCCGGGACACCCAGAGTGGGCGT----G i aotNan1.NW_018500483v1 I 17 C 0 s micMur3.chr18 56912089 34 + 57149010 AAGT--ATCTCAGAGGTCCAGCACACTGAGAGCACA-------- i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22892421 23 + 22939663 CAGTGCATCTCTGGGTATCTGTG--------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181834157 30 + 182113224 AAGC--A-CCCAGAGG-CCAGAACACTGAGCTTA---------- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1902596 367 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=849597.000000 s hg38.chr20_KI270870v1_alt 157073 75 + 183433 AGACCTTGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GACGTTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAC s panTro5.chr20 66492492 75 + 66533130 AGACCTTGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GACATTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62159960 75 + 62195757 AGACCTTGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GACATTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546141 75 - 578057 AGACCTTGCCCCTTCACTGGACTGCGAGAAGCACCCAGGA--GACGTTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067742 75 - 110113093 AGACCTTGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GACATTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807122 74 - 92844088 AGACC-TGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GACGTTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472646 74 + 96509753 AGACC-TGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GACGTTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942732 74 - 16982598 AGACC-TGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GACGTTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744758 74 - 3785965 AGACC-TGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GACGTTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334833 74 - 90373283 AGACC-TGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GATGTTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135389 74 - 179258 AGACC-TGCCCCTTCACTGGACTGCAAAAAGCACCCAGGA--GACGTTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGAT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 91116 77 + 372756 AGACCCTGCTCCTCCACCGGACTGCAAAAAGCACCCAGAGGTGACGTTGGAAGAGTG--GCAGGGAA-GGGGCTGAGGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324023 77 + 16356641 AGACCCTGCTCCTCCACCGGACTGCGAAAAGCACCCAGAGGCGATGATGGAAGAGTT--GCAGGGAA-GGGGCTGAGGAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195304 76 + 1231380 AGACCCTGCTCCTCCACCAGACTGCAGAAAGCA-CCAGGGGCGATGTTGGAAGAGTG--GCAGGGAA-GCGGCTGAGGAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726662 77 + 11732439 AGACCCTGCTCCTCCACCGGAATGCAAAAAGCACCCAGGGGCGACCTCGGAAGAGTG--GCAGGGAA-CAGGCTGAGGAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56912123 77 + 57149010 AGACCTTCCCCTTCCACTGGACTGCAAAGAGCGCCCAGAGGAGACGTTGGAAGAGCA--GCAGGGAA-GCGGCCGAGGAC i micMur3.chr18 C 0 I 181 s proCoq1.NW_012150197v1 1902963 78 - 2029793 AGACCTTCCCCTTCCACTGGACTGCAAAGAGCACCCGGAGAAGATGTTGGAAGAGCG--GCAGGGAAGGGGGCTGAGGAC i proCoq1.NW_012150197v1 I 367 I 5487 s otoGar3.GL873542 22892444 78 + 22939663 AGGTCTTCTCTTTCCACCGGACTGCAAAGATCACCCAGAGGACAGGGTGGCAGATCA--GCAGGGAAGGGGGCTGAGGAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181834187 57 + 182113224 ----------------------AGGCAAAAGTACTCAGAAAAGACATCAGAAGGGTGGAGTAAGGAA-GGGACTGAGGAC i mm10.chr2 C 0 C 0 e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=1107109.000000 s hg38.chr20_KI270870v1_alt 157148 156 + 183433 GTAGGGCGGCTGCTGCAGGGGCCTATCCACACATCCACCCACTTCCCTTGTGAAA------GCTTTCTGCTCAGCATGG-GGGGAGAACCCCTGGCACAGCGTCCATCCGAGCGTCTTGTTCTGATTCGCCTTCATCCAGCCACTCCTGTCTCAGCCACCCCT s panTro5.chr20 66492567 155 + 66533130 ATAGGGCGGCTGCTGCA-CGGCCTATCCACACATCCACCCCCTTCCCTTGTGGAA------GCTTTCTGCTCAGCATGG-GGGGAGAACCCCCGGCACAGCGTCCATCCGAGCGTCTTGTTCTGATTCGCCTTCATCCAGCCACTCCTGTCTCGGCCACCCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62160035 156 + 62195757 GTAGGGTGGCTGCTGCAGGGGCCTATCCACACATCCACCCCCTTCCCTTGTGAAA------GCTTTCTGCTCAGCATGG-GGGGAGAACCCCCGGCACAGCGTCCATCCGAGCGTCTTGTTCTGATTCGCCTTCATCCAGCCACTCCTGTCTCGGCCACCCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546216 156 - 578057 GTAGGGCGGCCGCTGCAGGGGCCGATCCACACATCCACCCACTTCCCTTGTGAAA------GCTTTCTGCTCAGCATGG-GGGGAGAACCCCTGGCACAGCATCTATCCGAGCGTCTCGTTCTGATTCGCCTTCATCCAGCCCCTCCTGTCTCAGCCACCCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067817 160 - 110113093 GTCGGGCGGCTGCTGCAGGGGCCTCTCCACACACTCACCCACTTCCCTTGTGAAA-GCACTGCTTTCTGCTCAGCAT-G-GGGGAGAACCCCTGGCACATCATCCATCAGAGTGTCTTGTTCTGATTCGCCTTCATCTAGCCAGTCCCGACTCAGCCACTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807196 157 - 92844088 GTAGGGCAGCTGCTGCAGGGGCCTCTCCACACATTCACCCAATTCCCTTGTGAAC-----TGCTTTCTGCTT-GCATGGCGGGGAGAACCCCTGACACATCATCTATCAGAGTGTCTTATTCTGACTCCCCTTCATCTAGCCAGTCCTGACTCAGCCACCCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472720 157 + 96509753 GTAGGGCAGCTGCTGCAGGGGCCTCTCCACACATTCACCCAATTCCCTTGTGAAC-----TGCTTTCTGCTT-GCATGGCGGGGAGAACCCCTGACACATCATCTATCAGAGTGTCTTATTCTGACTCCCCTTCATCTAGCCAGTCCTGATTCAGCCACCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942806 157 - 16982598 GTAGGGCAGCTGCTGCAGGGGCCTCTCCACACATTCACCCAATTCCCTTGTGAAC-----TGCTTTCTGCTT-GCATGGCGGGGAGAACCCCTGACACATCATCTATCAGAGTGTCTTATTCTGACTCCCCTTCATCTAGCCAGTCCTGACTCAGTCACCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744832 157 - 3785965 GTAGGGCGGCTGCTGCAGGGGCCTCTCCACACATTCACCCACTTCCCTTGTGAAC-----TGCTTTCTGCTC-GCATGGCAGGGAGAACCCCTGACACATCATCTATCAGAGTGTCTTATTCTGACTCCACTTCATCTAGCCAGTCCTGACTCAGCCACCCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90334907 157 - 90373283 GTAGGGCGGCTGCTGCAGGGGCCTCTCCACACATTCACCCACTTCCCTTGTGAAC-----TGCTTTCTGCTC-GCATGGCGGGGAGAACCCCTGACACATCATCTATCAGAGTGTCTTATTCTGACTCCCCTTCATCTAGCCAGTCCTGACTCAGCCACCCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135463 157 - 179258 GTAGGGCGGCTGCTGCAGGGGCCTCTCCACACATTCACCCACTTCCCTTGTGAAC-----TGCTTTCTGCTC-GCATGGCGGGGAGAACCCCTGACACATCATCTATCAGAGTGTCTTATTCTGACTCCCCTTCATCTAGCCAGTCCTGACTCAGCCACCCGT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 91193 160 + 372756 GCAGGGTAGCTTCTGCA-GAGCCTGTTCACATATTCACCCACTTCCCTTGTGAAA-GCATTGCTTTCTGCTTAGGATGG-GGGGAAAGCTCCTGGCACATCTTCCATCAGAGCTTCTTGTTCTGACTCCCCTTCATCTAGCCAGCCCTGACTCAGTCATCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324100 160 + 16356641 ACAGGGTGGCTTCTGTG-GAGACTGTTCACGTGTTCACCCACTTCCCTTGTGAAA-GCGTTGCTTTCTGTTTAGCATGG-GGGGAAAGCGCCTGGCACATCATCCATCAGAGCTTCTTGTTCTGACTCCCCTTCGTCCAGCCAGCCCTGGCTCAGCCACTCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195380 160 + 1231380 GCAGGGTGGCTTCTGCG-GAGCCTGTTCACATGTTCAACCGCTTCCCTTGTGAAA-GCGCTGCTTTCTGCTTCGCATGG-GGGGAAAGCTCCTGGCACAGCGTCCATCAGAGCTTCTTGTTCTGACTCCCCTTCGTCCAGCCAGCCCTGACTCAGCCACACCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726739 147 + 11732439 GCAGGGTGGCTTCTGCA-GAGCCTGTTCAAATATTCACCCACTTCCCTTGTAAAA-GCGTTGCTTTCTGCTTAGCGTGG-GGGGAAAGCTCCTGGCACATCATCCGTCAGAGCTTCTTGTTCTGACTCCCCTTCGTCTAGCCAGCCCTGA------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22892522 113 + 22939663 ----------------AAGGA----------------------------GTAGACAATATTAATTTGGGCTTAGCATCG--GGGAGAGCTCTTGGGATATTATCCTTCAGAGCTTCCTGTTCTCACTCTGTACCCTCTAGCCAGCCCTGACTTGGCCCT---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181834244 89 + 182113224 --AGGGTGGTTGCCACATGGG----------------------------GGAAAC----------TTTGCACAGTTTGA--------------GGCATGTCACCTATT-GAGTTTCCTGT------------------AGTCAGCATTGAAACAGCTTCCCT- i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e micMur3.chr18 56912200 181 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=696038.000000 s hg38.chr20_KI270870v1_alt 157304 71 + 183433 GACCACCACCAAGTACTGAGCAGGGAAATGGCGAGGCAGCCACTGTCTGGTACTCAGGAGCGGAGCTCCTC s panTro5.chr20 66492722 71 + 66533130 GACCACCACCAAGTACTGAGCAGGGAAATGGCGAGGCAGCCACTGTCTGGTACTCGGGAGCGGAGCTCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62160191 71 + 62195757 GACCACCACCAAGTACTGAGCAGGGAAATGGCGAGGCAGCCACTGTCTGGTACTTGGGAGTGGAGCTCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546372 71 - 578057 GACCACCACCAAGTACCGAGCAGGGAAATGGCAAGGCAGTCACCGTCTGGTACTCAGGAGCGGAGCTCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110067977 70 - 110113093 GACCGCCACCAAGTACTGAGCAGGCAGATGGCAAGGCAGCCACTGTCTGGTACTCAGGAGC-GAGCTCCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807353 71 - 92844088 GAACAACACCAAGTATTGAGCAGGGAAATGGCAAGGCAGCCACTGTCTGGTACTTAGGAGTGGAGCTCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96472877 71 + 96509753 GAACAACACCAAGTATTGAGCAGGGAAATGGCAAGGCAGCCACTGTCTGGTACTTAGGAGTGGAGCTCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16942963 71 - 16982598 GAACAACACCAAGTACTGAGCAGGGAAATGGCAAGGCAGCCACTGTCTGGTACTTAGGAGTGGAGCTCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3744989 71 - 3785965 GAACAACACCAAGTACTGAGCAGGGAAATGGCAAGGCAGCCACTGTCTGGTACTTAGGAGTGGAGCTCCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90335064 71 - 90373283 GACCAACACCAAGTACTGAGCAGGGAAATGGCAAGGCACCCACTGTCTGGTACTTAGGAGTGGAGCTCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 135620 71 - 179258 GAACAACACCAAGTACTGAGCAGGGAAATGGCAAGGCAGCCACTATCTGGTACTTAGGAGTGGAGCTCCTC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 91353 69 + 372756 GACCACCACCAAGTACTGAGCAGGGAAATGGTGAGGCAGCCACTGTCTGGTACTAAGGAGTTGAGCTCC-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324260 71 + 16356641 GCCCGCCACCAAGTACTGAGCAGGGAAATGGCAAGGCAGCCACTGTCCGGTACTAAGGAGTCGAGCTCCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195540 65 + 1231380 GCCCACCACCAAGTACTGAGCAGGGAAATGGCAAGGCAGCCACTATCTGGTACTCAGGAGT----CTCT-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726886 69 + 11732439 --CCACCACCAAGTACTGAGCAGGGAAATGGCAATGCAGCCACTGTCTGGTACTAAGGAGTCGCGCTCCTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56912381 70 + 57149010 GACCACCATCAAGTCCAGAGCAGGCAA-TGGCAAGGCAGCTACTGTCTGGTGTTCAGAAACGGAGCTCCTC i micMur3.chr18 I 181 I 5688 s otoGar3.GL873542 22892635 64 + 22939663 GACCACCACCAAGTCTCCAGAAGGCCA---ACCAGGCAGCTGCTGTCTGGTGTTAAG-AATGGAGCCT--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181834333 67 + 182113224 ----ACTACCAAGTTCCAAGCATAAAAAGAAACATGCAGCTATTGTCTGATGTACAGACACAGAGTACCTC i mm10.chr2 C 0 I 3412 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e dasNov3.JH569290 312915 4540 - 397369 I a score=2517202.000000 s hg38.chr20_KI270870v1_alt 157375 297 + 183433 CTCAGGAACAGGGTGCTGTccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggccggtggatcacctgaggtcaggagtttgagaccagcctagtcaacatggtgaaaccctgtctctactgaaaatac-------aaaaaaaattagccaggcatggtggcgggcacctgtaatcccagctgctcgggaggctggggcaggagaatcgcttgaacccgggaggcagaggttgcag------aga----tcgcactactgcac----tccagcctgggtcacagagtgagactccatt--------a--------aaa s panTro5.chr20 66492793 305 + 66533130 CTCAGGAACAGGGTGCTGTccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggccggtggatcacctgaggtcaggattttgagaccagcctagtcaacatggtgaaaccctgtctctactgaaaatac-------aaaaaaaattagccaggcatggtggtgggcacctgtaatcccagctgctcgggaggctggggcaggagaatcgcttgaaccctggaggcagaggttgcag------aga----tcgcactactgcac----tccagcctgggtcacagagtgagactccatT--------Aaaacaaacaaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62160262 304 + 62195757 CTCAGGAACAGGGTGCTGTccgggcaccgtggctcacgcctgtaatcccagcactttgggaggccaaggccggtggatcacctgaggtcaggagtttgagaccagcctagtcaacatggtgaaaccctgtctctactgaaaatac--------aaaaaaattagccaggcatggtggtgggcacctgtaatcccagctgctcgggaggctggggcaggagaatcgcttcaaccctggaggcagaggttgcag------aga----tcgcactactgcac----tccagcctgggtcacagagtgagactccatT--------Aaaacaaacaaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546443 301 - 578057 CTCAGGAACAGGGTGCTGTccggacacagtggctcacgcctgtaataacagcactttgggaggccaaggcgggtggatcacctgaggtcaggagtttgagaccagcctagtcaacatggtgaaaccctgtctctactgaaaatac-------aaaaaaaattagccaggcatggtggtgggcacctgtaatcccagctgctcgggaggctggggcaggagaatcacttgaacccgggaggcagaggttgcag------aga----tcgcactactgcac----tccagcctgggtcacagagtgagactccatt--------a----aaacaaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110068047 294 - 110113093 CTCAAGGACAGGGTGCTggccacgcgcggtggctcacacctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagtttgagaccagcctggtcaacatggtgaaaccctgtctctactgaaaatac-------aaaaaaaattagccaggcatggtggccggcacctgtaatcccagctgcttgggaggctggggcaggagaatcgcttgaacctgggaggcagaggttgcag------aga----tcgcactattgcac----tccagcctgggtcacagagtgagactccata--------a----------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807424 303 - 92844088 CTCAAAAACAGGGTGCTGTccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatca-ctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctcttctgaaaatac-------aaaaaaaattagccaggcatggtggcgggcacctgtaatcccagctgcttgggaggctggggcaggagcatcgcttgaactcgagaggcagaggttgcag------aga----tcgtactactgcac----tccagcctgggtcacagagtgagacttcatt-aaaaaaaa--------aaa i rheMac8.chr10 C 0 I 2 s macFas5.chr10 96472948 302 + 96509753 CTCAAAAACAGGGTGCTGTccgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatca-ctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctcttctgaaaatac-------aaaaaaaattagccaggcatggtggcgggcacctgtaatcccagctgcttgggaggctggggcaggagcatcgcttgaactcgagaggcagaggttgcag------aga----tcgtactactgcac----tccagcctgggtcacagagtgagacttcatt--aaaaaaa--------aaa i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16943034 296 - 16982598 CTCAAAAACAGGGTGCTGTccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatca-ctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctcttctgaaaatac-------aaaaaaaattagccaggcatggtggcgggcacctgtaatcccagctgcttgggaggctggggcaggagcatcacttgaactcgagaggcagaggttgcag------aga----tcgtactactgcac----tccagcctgggtcacagagtgagacttcatt--------a--------aaa i macNem1.NW_012014244v1 C 0 I 2 s cerAty1.NW_012001373v1 3745060 297 - 3785965 CTCAAGAACAGGGTGCTGTccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatca-ctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctcttctgaaaatac-------aaaaaaaattagccaggcatggtggcgggcacctgtaatcccagctgcttgggaggctggggcaggagcatcgcttgaactcgagaggcagaggttgcag------aga----tcgtactactgcac----tccagcctgggtcacagactgagacttcatt-------aa--------aaa i cerAty1.NW_012001373v1 C 0 I 2 s chlSab2.chr2 90335135 297 - 90373283 CTCAAGAACAGGGTGCTGTccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatca-ctgaggtcaggagtttgagaccagcctggccaacatagtgaaaccctgtctcttctgaaaatac------aaaaaaaaattagccaggcgtggtggcgggcacctgtaatcccagctgcttgggaggctggggcaggagcatcgcttgaactcgggaggcagaggttgcag------aga----tcatactactgcac----tccagcctgggtcacagagtgagactccata--------a--------aaa i chlSab2.chr2 C 0 I 11 s manLeu1.NW_012101652v1 135691 296 - 179258 CTCAAGAACAGGGTGCTGTccgggcgcagtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatca-ctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccctgtctcttctgaaaatac-------aaaaaaaattagccaggcatggtggcgggcacctgtaatcccagctgcttgggaggctggggcaggagcatcgcttgaactcgagaggcagaggttgcag------aga----tcgtactactgcat----tccagcctgggtcacagagtgagacttcatt--------a--------aaa i manLeu1.NW_012101652v1 C 0 I 545 s calJac3.chrUn_GL286459 91422 296 + 372756 -TCAAGAATAGTGTGCTG-CT-ggcgcggtggctcatgcctgtaat-ccagcacttttggaagctgaggtgggtggatcacctgaggtcaggagttcgagaccaaccttgtcaatatggtgaaaccctgtctctactaaaaatac------aaaaaaaaattagccgggcatggtggtgggcacccgtaatcccagctgcttgggaagctgaggcaggagaatcatttgaacctgggaggcagcgattgcaatgagtgaga----ttggactactgcac----tgcagcctgggtcacagagtgagacttcatt-------------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324331 290 + 16356641 TTCAAGAATAGCATGCCg-ctaggcacggtggctcatgcctgtaat-ccagcagttttggaggctgaggtgggcggatcacctgaggtcaggagttcgagaccaacccggtcaacatggtgaaaccccgtctctactaaaaatac-------aaaaaaaattagctgggcatgttggcgggcacctgtaatcccagctgctcgggaggctgaggcaggcgaatcgtttcaacctgggaggcagaggttgcaa----tgagg----ttggactactgcac----cccagcc----tcacagagtgagacttcatta------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195605 298 + 1231380 -TCAAGAATAGCGTGCCG-CTTggcgcggtggctcgtgcctgtaat-ccagcacttttggaggctgaggtgggcagatcacctgaggttaggagttcgagaccaacctggtcaacatggtgaaa-----tctctactaaaaatacaaaaaaaaaaaaaaattagttgggcatggtggtgggcacctgtaatcccagctgctcgggaggctgaggcaggagaatcatttgaacccgggaggcggaggttgcaa----tgaga----ttggactactgcactccatccagcctgggtcacagagtgagacttcata-------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2726955 297 + 11732439 CTTAAGAATAGCGTGCCg-ctaggcacggtggctcacgcctgcaat-ccagcacttttggaggctgaggtgggcggatcacctgaggtcaggagttcgagaccaacctggtcaacatggtgaaaccccgtctctactaaaaatac-------aaaaacaattagccgggcatggtggtgggcacctgtaatcccagctgctcgagaggctgaggcaggagaattgtttgaacctgggaaacagaggttgcagtgagtgagc----tcggactactgcac----tccagcctgggtcacagagtgagacttcatt-------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22892699 285 + 22939663 ---------------GTggctgggtgaggtgggtcacgcctgtaatcccagaactct-ggaggccaaggt-ggtgaattgcctgagctcaagagtttgagaaaagcctaagcaa---agtgagaccctgtctctagtaaaaacag-------aaaaaaacctagctgggcatgggggcgggtgcctggagtctcaactactcaggaggctgaggaaggatgatcacctgaatctaggaatctgaggttgctg------tgagttttgatgccacagcac----tctacccacggcaacagagtgagacttagtc-tcaaaaaa----------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=153086.000000 s hg38.chr20_KI270870v1_alt 157672 24 + 183433 caaacaaacaaacaaagaaTGGGG s panTro5.chr20 66493098 24 + 66533130 caaacaaacaaacaaaGAATGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62160566 24 + 62195757 caaacaaacaaacaaaGAATGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546744 24 - 578057 caaacaaacaaacaaagaaTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110068341 22 - 110113093 --aaaaaagaaaaaaagaaTGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807729 24 - 92844088 aaaaaaaaaagagaaaGAATAGGG i rheMac8.chr10 I 2 C 0 s macFas5.chr10 96473252 24 + 96509753 aaaaaaaaaagagaaagaaTAGGG i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16943332 24 - 16982598 aaaaaaaaaagagaaagaaTAGGG i macNem1.NW_012014244v1 I 2 C 0 s cerAty1.NW_012001373v1 3745359 24 - 3785965 aaaaaaaaaagagaaagaaTAGGG i cerAty1.NW_012001373v1 I 2 C 0 s chlSab2.chr2 90335443 24 - 90373283 aaaaaaaaGAGAGAAAGAATAGGG i chlSab2.chr2 I 11 C 0 s calJac3.chrUn_GL286459 91718 23 + 372756 -aaaaaaaaataaagagaaTGGGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324621 23 + 16356641 -aaaaaaaaaaaaaGGGAATGGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195903 23 + 1231380 -aaaaaaaaaaaaGGAGAATGGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2727252 22 + 11732439 --aaaaaaaaaaaaaagaaTGGGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22892984 24 + 22939663 gaaaaaagaaaaaaaagaaaagag i otoGar3.GL873542 C 0 I 497 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e manLeu1.NW_012101652v1 135987 545 - 179258 I a score=-287.000000 s hg38.chr20_KI270870v1_alt 157696 4 + 183433 CACT s panTro5.chr20 66493122 4 + 66533130 CACT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62160590 4 + 62195757 CACT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546768 4 - 578057 CGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110068363 4 - 110113093 CACT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807753 3 - 92844088 CAC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96473276 3 + 96509753 CAC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16943356 3 - 16982598 CAC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3745383 3 - 3785965 CAC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90335467 3 - 90373283 CAC- i chlSab2.chr2 C 0 C 0 s calJac3.chrUn_GL286459 91741 4 + 372756 TGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324644 4 + 16356641 TGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195926 4 + 1231380 TGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2727274 4 + 11732439 TGCT i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e manLeu1.NW_012101652v1 135987 545 - 179258 I e otoGar3.GL873542 22893008 497 + 22939663 I a score=902240.000000 s hg38.chr20_KI270870v1_alt 157700 136 + 183433 TGTTG-TAAAACCCTTAGAGGAT----AAA-AAAAAAATTTT---TAAT---TGTCATTGCAAAAGCGAC-ATTGTCCATCATACAAACAA----ACATCACAGAAGTAAATTAAATGAGAAGTTGTGTCCTTAGCCAGAGCTGAGACATGCT s panTro5.chr20 66493126 135 + 66533130 TGTTG-TAAAACCCTTAGAGGAT----AAA-AAAAAAA-TTT---TAAT---TGTCATTGCAAAAGCGAC-ATTGTCCATCATACAAACAA----ACATCACAGAAGTAAATTAAATGAGAAGTTGTGTCCTTAGCCAGAGCTGAGACATGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62160594 133 + 62195757 TGTTG-TAAAACCCTTAGAGGAT----AAA-AAAAA---TTT---TAAT---TGTCATTGCAAAAGCGAC-ATTGTCCATCATACAAACAA----ACATCACAGAAGTAAATTAAATGAGAAGTTGTGTCCTTAGCCAGAGCTGAGACATGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546772 135 - 578057 TGTTG-TAAAACCCTTAGAGGAT----AAA-AAAAAAA-TTT---TAAT---TGTCATTGCAAAAGCGAC-ATTGTCCATCATACAAACAG----ACATCACAGAAGTAAATTAAATGAGAAGTTGTGTCCTTAGCCAGAGCTGAGACATGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110068367 127 - 110113093 TGTTG-TAAAACCCTTAGAGGAT----AAA-AAAAAA--TTT---AAAT---TGTCATTGCAAAAGCGAC-ATTGTCCAT-------ACAA----ACATCACAGAAGTAAATTAAATGAGAATTTGTGTCCTTAGCCAGAGCTGAGACATGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807756 135 - 92844088 --TTG-TAAAACCCTTAAAGGAT--AAAAA-AAAAAAA-ATT---AAAT---TGTCATTGCAAAAGCAAC-ATTGTACATCATACAAACAA----ACATCACGGAGGTAAATTAAATGAGAAGTTGCCTCCTTAGCCAGAGCTGAGACATGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96473279 137 + 96509753 --TTG-TAAAACCCTTAGAGGATAAAAAAA-AAAAAAA-ATT---AAAT---TGTCATTGCAAAAGCAAC-ATTGTACATCATACAAACAA----ACATCGCGGTGGTAAATTAAATGAGAAGTTGCCTCCTTAGCCAGAGCTGAGACATGCT i macFas5.chr10 C 0 I 326 s macNem1.NW_012014244v1 16943359 136 - 16982598 --TTG-TAAAACCCTTAGAGGAT-AAAAAA-AAAAAAA-ATT---AAAT---TGTCATTGCAAAAGCAAC-ATTGTACATCATACAAACAA----ACATCATGGAGGTAAATTAAATGAGAAGTTGCCTCCTTAGCCAGAGCTGAGACATGCT i macNem1.NW_012014244v1 C 0 I 314 s cerAty1.NW_012001373v1 3745386 127 - 3785965 --TTG-TAAAACCCTTAGAGGAT--AAAAA-AAAAAA--------AAAT---TGTCATTGCAAAAGCAAC-ATTGTACATCAT----ACAA----ACATCACAGAGGTAAATTAAATGAGAAGTTGCCTCCTTAGCCAGAGCTGAGACATGCT i cerAty1.NW_012001373v1 C 0 I 316 s chlSab2.chr2 90335470 131 - 90373283 --TTG-TAAAACCCATAGAGGAT------T-AAAAAAA-ATT---AAAT---TGTCATTGCAAAAGCAAC-ATTGTACATCATACAAACAA----ACATCACAGAGGTAAATTAAATGAGAAGTTGCGTCCTTAGCCAGAGCTGAGACATGCT i chlSab2.chr2 C 0 C 0 s calJac3.chrUn_GL286459 91745 138 + 372756 ATTTG-TAAAACCCTTAGAGGAT----AACAAAAAAA--ATT---AAATTGTTGTCATTGCAAAAGCAAC-ATTGCCCATCATACAAACAG----ATATAACAGAGGTAAATAAACTGAGAAGTTGTGTCCTTAGCCagagctgatagatact i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324648 133 + 16356641 ATTTG-TAAAACCCTTAGAGGAT----AAC-AAAAAA--ATT---AAATTGCTGTCATTGCAAAAGCAAC-ATTGCCTATCATACAAAC------ATATCACAGAGGTAAGTAAAGTGAGAAGTTGTGTCCTTAGC--GAGCTGAGAGATACT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1195930 135 + 1231380 ATTTG-TAAAACCCTTAGAGGAT----AAC-AAAACA--ATT---AAATTGCTGTCATTGCAAAAGCAAC-ATTGCGTATCATACAAAC------ATATCACAGAGGTAAATAGCGCGAGAAGTTGTGTCCTTAGCCAGAGCTGAGAGATACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2727278 137 + 11732439 ATTTG-TAAAACCCTTAGAGGAT----AAC-AAAAAA--ATT---AAATTGTTGTCATTGCAAAAGCAAC-ATTGCCCGTCATACAAACAG----AGATCACAGAGGTAAATACAGTGAGAAGTTGTGTCTTCAGCCAGAGCTGAGAGATGCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22893505 147 + 22939663 TGTTGATGAAACTCTTAGAAGat----aaa-taaaaat-attttaaaattattGTAATTGCAAAAGCAACTCTCGTCCACTGTGAAAACAATGAGACAACACAGATACAAGTATAGTAAGAAGTGGTATCCTTAGTCAGAGCTGAGAAGTGCT i otoGar3.GL873542 I 497 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e manLeu1.NW_012101652v1 135987 545 - 179258 I a score=9090.000000 s hg38.chr20_KI270870v1_alt 157836 1 + 183433 a s panTro5.chr20 66493261 1 + 66533130 a i panTro5.chr20 C 0 C 0 s panPan2.chr20 62160727 1 + 62195757 a i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546907 1 - 578057 a i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110068494 1 - 110113093 a i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92807891 1 - 92844088 A i rheMac8.chr10 C 0 I 326 s macFas5.chr10 96473742 1 + 96509753 a i macFas5.chr10 I 326 C 0 s macNem1.NW_012014244v1 16943809 1 - 16982598 a i macNem1.NW_012014244v1 I 314 C 0 s cerAty1.NW_012001373v1 3745829 1 - 3785965 a i cerAty1.NW_012001373v1 I 316 C 0 s chlSab2.chr2 90335601 1 - 90373283 a i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 136532 1 - 179258 a i manLeu1.NW_012101652v1 I 545 C 0 s calJac3.chrUn_GL286459 91883 1 + 372756 a i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324781 1 + 16356641 a i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1196065 1 + 1231380 G i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2727415 1 + 11732439 a i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22893652 1 + 22939663 a i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=1326655.000000 s hg38.chr20_KI270870v1_alt 157837 149 + 183433 agaaattaaccttacatatttacccatggag-tctcatttccagagtccctt---tttaaatgtagagctactcttccatctgcttcatttgctatctgcctgaaaaattccctttaac----atttcacattgtgttggtctgctaatgaattctt s panTro5.chr20 66493262 149 + 66533130 agaaattaaccttacatatttacccatggag-tctcatttccagtgtcccgt---tttaaatgtagagctactcttccatctgcttcatttgctatctgcctgaaaaattccctttaac----atttcacattgtgttgctctgctaatgaattctt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62160728 149 + 62195757 agaaattaaccttacatatttacccatggag-tctcatttccagtgtcccgt---tttaaatgtagagctactcttccatctgcttcatttgctatctgcctgaaaaattccctttaac----atttcacattgtgttgctctgctaatgaattctt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 546908 149 - 578057 agaaattaaccttacatatttacccacggag-tctcatttccagtgtccctt---tttaaatgtagagctactcttccatctgcttcatttgctatctgcctgaaaaattccctttaac----atttcacattgtgttggtatgctaatgaattctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110068495 150 - 110113093 agaaattaaccttacatatttacccatggagttctcatttccagagtccctt---tttaaatctagatctactcttccatctgcttcatttgctatctacctgaaaaattccctttaac----gtttcacattgtgtgggtctgctaatgaattctt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92808218 150 - 92844088 AGAAATTaaccttacgtatttacccatggagttctcatttccagtgtccttt---ttcaaatgtagatctactcttctatctgcttcatttgctatctgcctgaaaaattccctttaac----gtttcacattgtgtgggtctgctaatgaattctt i rheMac8.chr10 I 326 C 0 s macFas5.chr10 96473743 150 + 96509753 agaaattaaccttacgtatttacccatggagttctcatttccagtgtccttt---ttcaaatgtagatctactcttctatctgcttcatttgctatctgcctgaaaaattccctttaac----gtttcacattgtgtgggtctgctaatgaattctt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16943810 150 - 16982598 agaaaTTaaccttacgtatttacccatggagttctcatttccagtgtccttt---ttcaaatgtagatctactcttctatctgcttcatttgctatctgcctgaaaagttccctttaac----gtttcacattgtgtgggtctgctaatgaattctt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3745830 150 - 3785965 agaaaTTaaccttacgtatttacccatggagttctcatttctagtgtccttt---ttcacatgtagatctactcttctatctgcttcatttgctatctgcctgaaaaattccctttaac----gtttcacattgtgtgggtctgctaatgaattctt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90335602 150 - 90373283 agaaattaaccttacgtatttacccgtggggttctcatttccagtgtccttt---ttcaaatgtagatctactcttctatctgcttcatttgccatctgcctgaaaaattccctttaac----gtttcacattgtgtgggtctgctaatgaattctt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 136533 150 - 179258 agaaaTTaaccttacgtatttacccatggagttctcatttccagtgtccttt---ttcaaatgtagatctactcttctatctgcttcatttgctatctgcctgaaaaattccctttaac----gtttcacattgtgtgggtctgctaatgaattctt i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 91884 150 + 372756 agaaattaaccttacatatttactcatggagttctcatttccagtgttcttt---cttaaatgtagatctactcttccatctgcttcatctgctatctgccggaaaaattccctttaat----atttctcattgtgtgggtctgctactgaattctt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324782 148 + 16356641 agaaagtaaccttacata-ttactcatggagttctcatttccagtgttcttt---cttaagtgtagatctactcttccatctgcttcatctgctatctgctggaaaaattccc-ttaat----atttctcattgtgtgggtctgctactgaattctt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1196066 135 + 1231380 AGAAATTaaccttgcatatttactcatggagttctcatttccagtgttcctt---cttaaatgtagatctactcttccacctgcttcatctgctg--------------tccc-tttat----atttctcattgtgtgggtctgctactgaattctt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2727416 138 + 11732439 agaaattaaccttacacacttaatcatggagttctcatttccagtgttcttt---cttaaatgcagatcta------------cttcatctgctatctgccagaaaaattccctttaat----atttctcattgtgtgggtctgctactgaattctt i aotNan1.NW_018500483v1 C 0 I 2927 s otoGar3.GL873542 22893653 157 + 22939663 agaaaagaatcttacacatttccccatgcagttctcattttcagcacccttcacatttttttgtagatgtatatgtccatctgtttcatttgctttctgcctagaaaattccctttaacatttatttcacattgtgtggatctgctgttgaattctt i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=2008964.000000 s hg38.chr20_KI270870v1_alt 157986 280 + 183433 ttagc-tttgtatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaagtttatttttgagagcagttt-gggtttacacaaaatttgagcagatagtaccaagagttcccatagacccctc----------------tccttattattaacatctggaatcactgtggtatgttataacaactaatacaccaatattgatgcattactattaactaaagt------------------------------------------------ctagtctacagttcacattagggttcactctttgtgttg--cagttacatgtt---ttgttgttgttttgtggg---------ttt s panTro5.chr20 66493411 289 + 66533130 tcagc-tttgtatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaagtttatgtttgagagcagttt-gggtttacacaaaatttgagcacatagtaccaagagttcccatagacccctc----------------tccttattattaacatcttgaatcactgtggtatgttataacaactaatacaccaatattgatgcattactattaactaaagt------------------------------------------------ctagtctacagttcacattagggttcactctttgtgttg--cagttacatgtt---ttgttgttgttttgtggggttttttttttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62160877 283 + 62195757 tcagc-tttgtatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaagtttatgtttgagagcagttt-gggtttacacaaaatttgagcacatagtaccaagagttcccatagacccctc----------------tccttattattaacatcttgaatcactgtggtatgttataacaactaatacaccaatattgatgcattactattaactaaagt------------------------------------------------ctagactacagttcacattagggttcactctttgtgttg--cagttacatgtt---ttgttgttgttttgtggggtt------gtt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 547057 280 - 578057 ttagc-tttgtatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaagtttatttttgagggcagtttggggtttacacaaaatttgagcagatagtaccaagaattcccatagacccctc----------------tccttattattaacatcttgaatcactgtggtatgttataacaactaatacaccaatagtgatgcattactattaactaaagt-----------------------------------------------------ctacagttcacattagggttcactctttgtgttg--cagttacatgtt---ttgttgttgttttgtgggtttt-----tgt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110068645 273 - 110113093 ttagc-tttgtatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaactttatttttgagagcagtttggggtttacacaaaatttgagcagatattacaaagagttcccacagacccctc----------------tccttattattaacatcttgaatcactgtggtatgttgtaacaactaatacaccaatattgatgcattactattaactaaagt-----------------------------------------------------ctatagtacacattagggttcactgtttgtgttg--caGTTACATGTT---TTGTCGTTGTTTTGTGGG------------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92808368 344 - 92844088 ttagc-tttgcatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaactttatttttgagagcagtttggggtttacaggaaatttgagcagatagtacaaagagttcccataaacccctct-cctgtacccagttttccttattattaacatcttgaatcactatggtacattgtaacaactaatacaccaatattgatgcattactattaactatagttattagttaatagttatttattctATTTAACTattagttaatagttaattagtctatagttcacattagggttcactctttgtgttg--cagttacatgttttgttgttgttgttttgtggg------------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96473893 344 + 96509753 ttagc-tttgcatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaactttatttttgagagcagtttggggtttacaggaaatttgagcagatagtacaaagagttcccataaacccctct-cctgtacccagttttccttattattaacatcttgaatcactatggtacattgtaacaactaatacaccaatattgatgcattactattaactatagttattagttaatagttatttattctatttaactattagttaatagttaattagtctatagttcacattagggttcactctttgtgttg--cagttacatgttttgttgttgttgttttgtggg------------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16943960 347 - 16982598 ttagc-tttgcatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaactttatttttgagagcagtttggggtttacaggaaatttgagcagatagtacaaagagttcccataaacccctct-cctgtacccagttttccttattattaacatcttgaatcactatggtacattgtaacaactaatacaccaatattgatgcattactattaactatagttattagttAATAGTTATGTATTCTATTTAACTattagttaatagttaattagtctatagttcacattagggttcactctttgtgttg--cagttacatgttttgttgttgttgttttgtggg---------gtt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3745980 344 - 3785965 ttagc-tttgcatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaactttatttttgagagcagtttggggtttacaggaaatttgagcagatagtacaaagagttcccataaacccctct-cctgtacccagttttccttattattaacatcttgaatcactatggtacattgtaacaactaatacaccaatattgatgcattactattaactatagttattagttAATAGTTATTTATTTTATTTAACTattagttaatagttaattagtctatagttcacattagggttcactctttgtgttg--cagttacatgttttgttgttgttgttttgtggg------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90335752 344 - 90373283 ctagc-tttgcatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaactttatttttgagagcagtttggggtttacaggaaatttgagcagatagtacaaagagttcccataaacccctct-tctgtacacagttttccttattattaacatcttgaatcactatggtacattgtaacaactaatacaccaatattgatgcattactattaactatagttattagttAATAGTTATTTATTCTATTTAACTattagttaatagttaattagtctatagttcacattagggttcactctttgtgttg--cagttacatgttttgttgttgttgttttgtggg------------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 136683 346 - 179258 ttagc-tttgcatgtctgagaaaaatctttCATTG---tttaaaataaatgacaaactttatttttgagagcagtttggggtttacaggaaatttgagcagatagtacaaagagttcccataaacccctct-cctgtacccagttttccttattattaacatcttgaatcactatggtacattgtaacaactaatacaccaatattgatgcattactattaactatagttattagttaatagttatttattctATTTAACTattagttaatagttaattagtctatagttcacattagggttcactctttgtgttg--cagttacatgttttgttgttgttgttttgtggg----------tt i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 92034 266 + 372756 ttagc-tttgtatgtctgagaaaaatctttCACTG---TTTTAAACACATGACAAt-----------agagcagtttgaggtttacagaaaatttgggcagatggtacaaagagttcccatagacccctct-cctgcacacaattttccttattagtaacatcttgaattactatggtatgttgtaacaattaatatatcaatattgatgcattgctattaactaaagt-----------------------------------------------------ctatagttcacattagggttcactcgttgtgttg--cagttaca--------------tgttttgttgt------------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16324930 262 + 16356641 ttagc-tttgtatgtctgagaaaaatctttCACGA-------AAACAAATGACAAA-----------agagcagtttggggtttacagaaaatttgagcagatagtacaaagagttcccgtagacccctct-cctgcacacagttttcctcattagtaacatcttgaatcactatggtatgttgtaacaattaacataccaatattgatgcattgctattaactaaagc-----------------------------------------------------ctgtagttcacattagggttcactcgttgtgttg--cagttgca--------------tgttttgtggg------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1196201 268 + 1231380 ----------tatgtctgagaaaaatctttCACTG---TTTAAAACAAATGACAAA-----------agagcagttcggggtttacagaaaatctaagcagatagtacaaagagttcctatagacccctct-cctgcacacaattttccttattaggaacatcttgaattactatggtatgttgtaacaattaatataccaatattgatgcattactattaactaaagt-----------------------------------------------------ctatagttcacattagggttcactcgttgtgttg--cagttacatgtt---ttgttgttgttttgtggg------------ i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22893810 262 + 22939663 gtagcttttgtatgtctgggaaaaa------attgcactttaaaaaaattagtaaactttatttttgagagcggttttgtgtttacagaaaatttaagcagaaagtacatagatctgct--------ctctgcccgcatccaatttaacctgttagtaacaacttgcatcgttatggtacattataaaaactgatgtaccaatattgatgcattaccattaactatagc-----------------------------------------------------ttgtagtttacactggggctcac----tgtgttgcacagttgtatg-------------gattt----------------- i otoGar3.GL873542 C 0 I 22 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I a score=730224.000000 s hg38.chr20_KI270870v1_alt 158266 105 + 183433 ttttttgttttttttttggagacaggctcaggctctgt---------tggagtgcagtggcacaatcactgctcactgcagatttcacctcccagcctcaagcgatccttccta s panTro5.chr20 66493700 105 + 66533130 tttttttttttttttttggagacaggctcaggctctgt---------tggagtgcagtggtacaatcactgctcactgcagattccacctcccagcctcaagcgatccttccta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62161160 105 + 62195757 ttttttttttttttttggtagacaggctcaggctctgt---------tggagtgcagtggtacaatcactgctcactgcagattccacctcccagcctcaagtgatccttccta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 547337 105 - 578057 ttttgttttttttttttggagacagtctcaggctctgt---------tggagtgcagtggcacaatcactgctcactgcagattccacctcccagcctcaggcgatccttccta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110068918 98 - 110113093 -------ttttttttttggagacaggctcaggctctgt---------tggagtgcagtggcacaatcactgctcactgcagattccacctcccagccttaagcgatccttccta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92808712 105 - 92844088 ttttttttttttttttttgatacaggctcaggctctgt---------tgcagtgcagtggcacaatcactgctcactgcagcttccacctcccagcctcaagcgatccttccta i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96474237 105 + 96509753 ttttttttttttttttttgatacaggctcaggctctgt---------tgcagtgcagtggcacaatcactgctcactgcagcttccacctcccagcctcaagcgatccttccta i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16944307 105 - 16982598 ttttttttttttttttttgagacaggctcaggctctgt---------tgcagtgcagtggcacaatcactgctcactgcagcttccacctcccagcctcaagcgatccttccta i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3746324 101 - 3785965 ----ttttttttttttttgagacaggctcaggccctgt---------tgcagtgcagtggcacaatcactgctcactgcagcttccacctcccagcctcaagcgatccttccta i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90336096 101 - 90373283 ----ttttttttttttttgagacaggctcaggctctgt---------tgcagtgcggtggcacagtcactgctcactgcagcttccacctcccagcctcaagcgatccttccta i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 137029 105 - 179258 ttttttttttttttttttgagacaggctcaggctctgt---------tgcagtgcattggcacaatcactgctcactgcagcttccacctcccagcctcgagcgatccttccta i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 92300 112 + 372756 ttcttttttttttt--tggaggcagactcaggctttgttacccagactggagtgcagtggcacaatctctgctcactgtagcttcaacctcctggccttaagctatccttcctg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16325192 113 + 16356641 ttcttttttttttt-ctggagacagactcgggctttgtcacccagactggagtgcagtggcacaatcactgctcactgtagcttcaacttcctggcctcaagtgatccttccta i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1196469 114 + 1231380 ttcttttttttttttctggagacagactcaggctttgttacccagactggaatgcagtggcacaatcactgctcgccgtagcttccacctccgcgcctcaagcaatccttccta i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I e otoGar3.GL873542 22894072 22 + 22939663 I a score=731805.000000 s hg38.chr20_KI270870v1_alt 158371 120 + 183433 cctcagcctccagagtagctgggattacaggcatgtgccactatgcccggctaa--------------ttttttttttttttt----gtagtgacgaggtctcgctatgttgccaaggctggtcttgaactcctcctg s panTro5.chr20 66493805 118 + 66533130 cctcagcctccagagtagctgggattacaggcatgtgccactatgcccagctaa----------------ttttttttttttt----gtagtgacgaggtctcgctatgttgccaaggctggtcttgaactcctcctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62161265 117 + 62195757 cctcagcctccagagtagctgggattacaggcatgtgccactatgcccggctaa-----------------tttttttttttt----gtagtgacgaggtctcgctatgttgccaaggctggtcttgaactcctcctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 547442 115 - 578057 cctcagcctccagagtagccgggattacaggcatgtgccaccatgcttggctaa-------------------tttttttttt----gtagtgacgaggtctcgctatgttgccaaggctggtcttgaactcctcctg i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92808817 133 - 92844088 cctcagcctcctgagtagctgggattacaggcctgtgccaccatgcccggctaa-tttttttttctttttctctttttttttt----gtagtgacgaggtctcgctgtgttgccaaggctggtcttgaaatactcctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96474342 133 + 96509753 cctcagcctcctgagtagctgggattacaggcctgtgccaccatgcccggctaa-tttttttttctttttctctttttttttt----gtagtgacgaggtctcgctgtgttgccaaggctggtcttgaaatactcctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16944412 133 - 16982598 cctcagcctcctgagtggctgggattacaggcctgtgccaccatgcccggctaa-tttttttttctttttctctttttttttt----gtagtgacgaggtctcgctgtgttgccaaggctggtcttgaaatactcctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3746425 133 - 3785965 cctcagcctcctgagtagctgggattacaggcctgtgccaccatgcccggctaa-tttttttttctttttctctttttttttt----gtagtgacgaggtctcgctgtgttgccaaggctggtcttgaaatactcctg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90336197 133 - 90373283 cctcagcctcctgagtagctgggattacaggcctgtgccaccatgcccggctaa-tttttttttctttttttctttttttttt----gtagtgacgaggtctcgctgtgttgccaaggctggtcttgaaatcctcctg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 137134 134 - 179258 cctcagcctcctgagtagctgggattacaggcctgtgccaccatgcccggctaattttttttttctttttctctttttttttt----gtagtgacgaggtctcactgtgttgccaaggctggtcttgaaatactcctg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 92412 118 + 372756 cctcagcctctggagtaactgggtctacaggcctgtgccaccatccctagctaa--------------------ttttttttttttcgtagcgatgaggtctcactatgttgccaaggctggtcttgaactcttcctg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16325305 114 + 16356641 cctcagcctcctgagtaactgggactacaggcctgtgccaccacccctagctaa--------------------ttttttttt----gtagtgatgaggtcttgctatgttgccaaggctggccttgaactcttcctg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1196583 114 + 1231380 cctcagcctcctgagtaactgggactacaggcctgtgccaccacccctagctaa--------------------ttttttttt----gtagtgatgaggtctcgttatgttgccaaggctggtcttgaactcttcctg i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I e nomLeu3.chr13 110069016 0 - 110113093 C e otoGar3.GL873542 22894072 22 + 22939663 I a score=605745.000000 s hg38.chr20_KI270870v1_alt 158491 89 + 183433 cctcagcctcccaaagtgctaggattacaggcatgagccacagcacctggctagttatatgggttttgactaaagcataataacatgta s panTro5.chr20 66493923 89 + 66533130 cctcagcctcccaaagtgctaggattacaggcatgagccacagcacctggctagttacatgggttttgactaaagcataataacatgta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62161382 89 + 62195757 cctcagcctcccaaagtgctaggattacaggcatgagccacagcacctggctagttatatgggttttgactaaagcataataacatgta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 547557 89 - 578057 cctcagcctcccaaagtgctgggattacaggcatgagccacagcacctggctagttatatgggttttgactaaagcataataacatgca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110069016 89 - 110113093 cctcactctcccaaagtgctaggattataggcatgagccaccgcacctggctagtCAtatgggttttgactaaagcataataacatgta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92808950 89 - 92844088 cctcagcctcccaaagtgctaggattacaggcgtgagccaccgcacctggATAGttatatgggttttgacaaaagcataataacatgta i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96474475 89 + 96509753 cctcagcctcccaaagtgctaggattacaggcgtgagccaccgcacctggatagttatatgggttttgacaaaagcataataacatgta i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16944545 89 - 16982598 cctcagcctcccaaagtgctaggattacaggcgtgagccaccgcacctggATAGttatatgggttttgacaaaagcataataacatgta i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3746558 89 - 3785965 cctcagcctcccaaagtgctaggattacaggcgtgagccaccgcacctggATAGttatatgggttttgacaaaagcataataacatgta i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90336330 89 - 90373283 cctcagcctcccaaagtgctaggattacaggcgtgagccaccgcacctggatagttatatgggttttgacaaaagcataataacatgta i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 137268 89 - 179258 cctcagcctcccaaagtgctaggattacaggcgtgagccaccgcacctggATAGttatatgggttttgacaaaagcataataacatgta i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 92530 76 + 372756 cctcagcctcctaaagt-------------gcataagccactgcacctggctagttatatgggttttgacaaacacatgataacatgta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16325419 75 + 16356641 cctcagcctcccaaagt-------------gcatgagccacggtgcctggctagttatatggg-tttgacaaacgcataatgacatgcg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1196697 75 + 1231380 cctcagcctcccaaagg-------------gcatgagccactgcacct-gctagtgatatgggttttgagaaacgcataataacatgtg i cebCap1.NW_016107870v1 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I e otoGar3.GL873542 22894072 22 + 22939663 I a score=3632101.000000 s hg38.chr20_KI270870v1_alt 158580 467 + 183433 tccaccattacagtatcatacagaatagtttcagtgccctaaaaa-ccctctctgctctgccagttcatctctccctctcc-------ctccaaccccaatccctggcaaccattgatcttttcacagtttctacagttttcagttttcccgaatgtcatatcactggaatcatatagtgttaatatgtagcctttttatcctggtttctttcatttcgcaataagcatttaagtttcctccttgtcttttcatgtctcagagctcattcttgtt--atcattcattcatactccattgcttagcatgtatgagtttgtttattcattcacctgttgaagga-----------catcttggttgtttccaaattttggaaactgtgaatacagctgttataaaaatctatgtgcaactttttgcatggacatagtggt----tgagtaagcacctaggagtgcaaatgctggatcataaggtaagactTGtg s panTro5.chr20 66494012 467 + 66533130 tccaccattacagtatcatacagaatagtttcagtgccctaaaaa-ccctctctgctctgccagttcatctctccctctcc-------ctccaaccccaatccctggcaaccattgatcttttcacagtttctacagttttcagttttcccgaatgtcatatcattggaatcatatagtgttaatatgtagcctttttatcctggtttctttcatttcgcaataagcatttaagtttcctccttgtcttttcatgtctcagagctcattcttgtt--atcattcattcatactccattgcttagcatgtatgagtttgtttattcattcacctgttgaagga-----------catcttggttgtttccaaattttggaaactgtgaatacagctgttataaaaatctatgtgcaactttttgcatggacatagtggt----tgagtaagcacctaggagtgcaaatgctggatcataaggtaagactTGtg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62161471 467 + 62195757 tccatcattacagtatcatacagaatagtttcagtgccctaaaaa-ccctctctgctctgccagttcatctctccctctcc-------ctccaaccccaatccctggcaaccattgatcttttcacagtttctacagttttcagttttcccgaatgtcatatcattggaatcatatagtgttaatatgtagcctttttatcctggtttctttcatttcgcaataagcatttaagtttcctccttgtcttttcatgtctcagagctcattcttgtt--atcattcattcatactccattgcttagcatgtatgagtttgtttattcattcacctgttgaagga-----------catcttggttgtttccaaattttggaaactgtgaatacagctgttataaaaatctatatgcaactttttgcatggacatagtggt----tgagtaagcacctaggagtgcaaatgctggatcataaggtaagactTGtg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 547646 467 - 578057 tccaccattacagtatcagacagaatagtttcagtgccctaaaaa-ccctctgtgctctgccagttcatctctccctctcc-------ctccaaccccaatctctggcaaccattgatcttttcacagtttctacagttttcacttttcccgaatgtcatatcattggaatcatatagtgttaatatgtagcctttttatcctggtttctttcatttcgcaatacgcatttaagtttcctccttgtcttttcatgtctcagagctcattcttgtt--atcattcattcatactccattgcttagcatgtatgaatttgtttattcattcacctgttgaagga-----------catcttggttgtttccaatttttggaaactgtgaatacagctgttataaaaatctatgtgcaactttttgcgtggacatagtggt----tgagtaagcacctaggagtgcaaacgctggatcataaggtaagactTGGg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110069105 469 - 110113093 tccaccattacagtatcatacagaatagtttcagtgccctaaaaa-ccctctctgctctgcctgttcatctctccctctcc-------ctccaaccccaatccctggcaaccattgatcttttcacagtttctacagttttcattgttcccgaatgtcgtatcattggactcatatagtgttaatatgtagcctttttatcctggtttctttcatttcgcaataagcatttaaggttcctccttgtcttttcatgtctcagagctcatttttttttaatcattgattcatactccattgcttagcatgtgtgagtttgtttattcattcacctattgaagga-----------catcttggttgtttccaatttttggaaactgtgaatacagctgttataaaaatctatgtgcaactttttgcatggacacagtggt----tgagtaagcacctaggagtgcaaatgctggatcataaggtaagactCGtg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92809039 465 - 92844088 tccaccgttacagcatcatgcagaatagtttcagtgccctaaaaa-tcctctgtgctctgcctgttcatctctccctctcc---------tcaaccccaatccctggcaaccattgatctgttcacagtttctacagttttcacttttcctgaatgtcttatcattggaatcatatagtgttaatacgtagcctttgtatcctggtttctttcatttcgcaataagcattcaaggttcctccttgtcttttcgtggctcagagctcattcttttt--atcaccgattcatcctctattgtttagcatgtatgagtttgtttattcatttacctattgaagga-----------catcttggttgtttccaatttttggaaactgtgaatgcagctgttataaaaatctaagtgcacctttttgcatggacatagtggt----tgagtaagcacctaggagtgcaaatgctaaaccataaggtaagactTGtg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96474564 465 + 96509753 tccaccgttacagcatcatgcagaatagtttcagtgccctaaaaa-tcctctgtgctctgcctgttcatctctccctctcc---------tcaaccccaatccctggcaaccattgatctgttcacagtttctacagttttcacttttcctgaatgtcttatcattggaatcatatagtgttaatacgtagcctttgtatcctggtttctttcatttcgcaataagcattcaaggttcctccttgtcttttcgtggctcagagctcattcttttt--atcaccgattcatcctctattgtttagcatgtatgagtttgtttattcatttacctattgaagga-----------catcttggttgtttccaatttttggaaactgtgaatgcagctgttataaaaatctaagtgcacctttttgcatggacatagtggt----tgagtaagcacctaggagtgcaaatgctaaaccataaggtaagactTGtg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16944634 465 - 16982598 tccaccgttacagcatcatgcagaatagtttcagtgccctaaaaa-tcctctgtgctctgcctgttcatctctccctctcc---------tcaaccccaatccctggcaaccattgatctgttcacagtttctacagttttcacttttcctgaatgtcttatcattggaatcatatagtgttaatacgtagcctttgtatcctggtttctttcatttcgcaataagcattcaaggttcctccttgtcttttcgtggctcagagctcattcttttt--atcaccgattcatcctctattgtttagcatgtatgagtttgtttattcatttacctattgaagga-----------catcttggttgtttccaatttttggaaactgtgaatgcagctgttataaaaatctaagtgcacctttttgcatggacatagtggt----tgagtaagcacctaggagtgcaaatgctaaaccataaggtaagactTGtg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3746647 465 - 3785965 tccaccgttacagcatcatgcagaatagtttcagtgccctaaaaa-tcctctgtgctctgcctgttcatctctccctctcc---------tcaaccccaatccctggcaaccattgatctgttcacagtttctacagttttcacttttcctgaatgtcttatcattggaatcatatagtggtaatacgtagcctttgtatcctggtttctttcatttcgcaataagcattcaaggttcctccttgtcttttcgtggctcagagctcattcttttt--atcaccgattcatactctattgtttagcatgtatgagtttgtttattcatttacctattgaagga-----------catctgggttgtttccaatttttggaaactgtgaatgcagctgttataaaaatgtaagtgcacctttttgcatggacatagtggt----tgagtaagcacctaggagtgcaaatgctaaaccataaggtaagacttgtg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90336419 465 - 90373283 tccaccgttacagcatcatgcagaatagtttcagtgccctaaaaa-tcctctgtgctctgcctgttcatctctccctctcc---------tcaaccctaatccctggcaaccattgatctgttcacagtttttacagttttcacttttcccgaatgtcttatcattggaatcatatagtgttaatacgtagcctttgtatctcggtttctttcacttcgcaataagcattcaaggttcctccttgtctttttgtggctcagagctcattcttttt--atcactgattcatactctattgtttagcatgtatgagtttgtttattcatttacctattgaagga-----------tatcttggttgtttccaatttttggaaactgtgaatgcagctgttataaaaatctaagtgcacctttttgcatggacatagtggt----tgagtaagcacctaggagtgcaaatgctaaaccataaggtaagactTGtg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 137357 465 - 179258 tccaccgttacagcatcatgcagaatagtttcagtgccctaaaaa-tcctctgtgctctgcctgttcatctctccctctcc---------tcaaccccaatccctggcaaccattgatctgttcacagtttctacagttttcacttttcctgaatgtcttatcattggaatcatatagtgttaatacgtagcctttgtatcctggtttctttcatttcgcaataagcattcaaggttcctccttgtcttttcgtggctcagagctcattcttttt--atcaccgattcatactctattgtttagcatgtatgagtttgtttattcatttacctattgaagga-----------catcttggttgtttccaatttttggaaactgtgaatgcagctgttataaaaatctaagtgcacctttttgcatggacatagtggt----tgagtaagcacctaggagtgcaaatgctaaaccataaggtaagacttgtg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 92606 471 + 372756 tccaccattacagtttcatacagaatagtttcagagccctaaaaattcctttgtgctctgcctgttcatctctccctctcc-------ctccaaccccaatccctggcaaccactgatctttttacagtttctacagtttttgcttttcctgaatgtcttatcattggaatcatatagtgttaatatgtatccttttcattctggtttctttcatttagcaataagcatttaaggttcctccttgtcttttcatggctccaagctcattcttttt--atgattgattaatactccactgatcagcatg-acgagtttgctcattaattcaccgattgaagga-----------catcttgattgcttccagtttttggaaattgtgaatacagctgttataaaaatttatgtgcaactttttgtgcggacatagtggttatttgagtaaatacctaggagtgcaaatgctgggtcataaggtaagactTGtg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16325494 470 + 16356641 tccactattacagtgtcatacagagtagtttcagtgccctaaaaattcctttgtgctctgcccattcatctctccctctcc-------ctccaaccccaatccctggcaaccactgatctctttatagtttctacagttttcgcttttcctgaatgtcttatcattggaatcatgtagtgttaacatgtagccttttcatcctggcttctttcatttagcaataagcatttaaggctcctccttgtcttttcatggctccgagctcattcttttt--atcattgattaatactccactgatcagcatg-acgcgtttgtttattaa-tcaccgattgaagga-----------catcttggttgcttccaatttttggaaattgtgaatacagctgttttaaaaatttatgtgcaactttttgtgcggacatagtggttatttgagtaaatacctaggagtgcaaatgctgagtcataaggtaagactTGTg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1196772 482 + 1231380 tccaccattacagtgtcatacagaatagtttcagggccctaacaattcctttgtgctctgcccgttcatctctccctctcc-------ctccaaccccaatccccggcaaccattgatctttttatagtttctacagttttcgcttttcccgaacgtcttatcattggaatcatagagtgttaatatgtagccttttcatcctggcttctttcagttagcaataagcatttaaggttcctccttgtcttttcatggctccgaggtcattcttttt--accgttgattaatactccactggtcggcatg-acgagtttgtttattaattcactgattgaaggaattaataaagcaatcttggttgcttccaatttttggaaattgtgaatacagctgttttaaaaatttatgtgcaactttttgtgcggacatagtggttatctgagtaaatacctaggagtgcagatgctgggtcataaggtaagagtTGTG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22894094 393 + 22939663 tctaccacaatagtgtcacacagaccagtttcactgccctgaaa--tcctctgtggtcggtctgtgcatgtctccctctccccactgcccccacccccaattcctggcaaccagtagtccttccaatgtttctatagttt--gtttttccagaatgtcatattgttagaattatacag-----------------------------actttta-------------atttaagttttctccatgtcttttcat-------agctctttctcttt--atcatggactcagactccattgtatagatt--atcagtttgttta----------------------------------------tgcttccaattttgggcaattgtgaataaagctgctataaatatctatgtgcaggtttctgtgtgtaaa-attagttatatgggtaaacacctgggagcacaaatgctggattataaggtcaca-ttatg i otoGar3.GL873542 I 22 I 1066 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I a score=240817.000000 s hg38.chr20_KI270870v1_alt 159047 28 + 183433 tcttccacagagcagaag-ttttaatttt s panTro5.chr20 66494479 28 + 66533130 tctttcacagagcagaag-ttttaatttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62161938 28 + 62195757 tctttcacagagcagaag-ttttaatttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 548113 28 - 578057 tctttcacagagcagaag-ttttaatttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110069574 28 - 110113093 tctttcacagagcagaag-ttttaatttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92809504 28 - 92844088 tctttcacagagcagaca-ttttaatttt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96475029 28 + 96509753 tctttcacagagcagaca-ttttaatttt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16945099 28 - 16982598 tctttcacagagcagaca-ttttaatttt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3747112 28 - 3785965 tctttcacagagcagaca-ttttaatttt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90336884 28 - 90373283 tctttcacagagcagaca-ttttaatttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 137822 28 - 179258 tctttcacagagcagaca-ttttaatttt i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 93077 28 + 372756 tctttcatagagcagaag-ttttaatttt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16325964 28 + 16356641 tctttcatagagcagaag-ttttaatttt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1197254 28 + 1231380 TCTTTCATAGAGCAGAAG-ttttaatttt i cebCap1.NW_016107870v1 C 0 I 1782 s otoGar3.GL873542 22895553 29 + 22939663 tctttcacaaaacagaagtttttaatttt i otoGar3.GL873542 I 1066 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I a score=3107254.000000 s hg38.chr20_KI270870v1_alt 159075 457 + 183433 aacaaaatctaccttaccaatttttactttcacggattgtgtgtttgacttgtcaaaagagtcatcactaa-acccaagaccaccaggattttctcctatattattttgtagaacttttatgtaaaaagtttgagatctatgtgtagttttttggttttttgtttgcatatggatgttcagttgtcccagcatcatttgttgaaaagactattctttctccatttaattgcttttgctcctttgtcaaagaacagttgactgtatttgtgtaggtgtatttctgggtttactattctattccattgatctgtttgtctcttcttttgccaacaccacactgtcttgattactgtaacgttatag---gtcttgaaatctggttgtgtcagttctccaacttcg-------------------------------------------------------------------------------------------------------------ttcttcttcagtactgtgttggccattctgggcattttgcctttccatatgcacttta s panTro5.chr20 66494507 457 + 66533130 aacaaaatctaccttaccaatttttactttcatggattgtgtgtttgacttgtcaaaaaagtcatcactaa-tcccaagaccaccaggattttctcctatattattttgtagaagttttatgtaaaaagtttgagatctatgtgtagttttttggttttttgtttgcatatggatgttcagttgtcccagcatcatttgttgaaaagactattctttctccatttaattgcttttgctcctttgtcaaagaacagttgactgtatttgtgtgggtgtatttctgggcttactattctattccattgatctgtttgtctcttcttttgccaacaccacactgtcttgattactgtaactttatag---gtcttgaaatctggttgtgtcagttctccaacttcg-------------------------------------------------------------------------------------------------------------ttcttcttcagtactgtgttggccattctgggcattttgcctttccatatgcacttta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62161966 457 + 62195757 aacaaaatctaccttaccaatttttactttcatggattgtgtgtttgacttgtcaaaaaagtcatcactaa-tcccaagaccaccaggattttctcctatattattttgtagaagttttatgtaaaaagtttgagatctatgtgtagttttttggttttttgtttgcatatggatgttcagttgtcccagcatcatttgttgaaaagactattctttctccatttaattgcttttgctcctttgtcaaagaacagttgactgtatttgtgtgggtgtatttctgggcttactattctattccattgatctgtttgtctcttcttttgccaacaccacactgtcttgattactgtaactttatag---gtcttgaaatctggttgtgtcagttctccaacttcg-------------------------------------------------------------------------------------------------------------ttcttcttcagtactgtgttggccattctgggcattttgcctttccatatgcacttta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 548141 457 - 578057 aacaaaatctaccttaccaatttttactttcatggattatgtgtttgacttgtcaaaaaagtcatcactaa-acccaagaccaccaggattttctcctatattattttgtagaacttttatgtaaaaagtttgagatctatgtgtagttttttggttttttgtttgcatatggatgttcagttgtcccaggatcatttgttgaaaagactattctttctccatttaattgcttttgctcctttgtcaaagaacaattgactgtatttgtgtgggtgtatttctgggcttactattctataccattgatctgtttgtctcttcttttgccaacaccacactgtcttgattactgtaactttataa---gtcttgaaatctggttgtgtcagttctccaacttcg-------------------------------------------------------------------------------------------------------------ttcttcttcagtactgtgttggccattctgggcattttgcctttccatatgcacttta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110069602 454 - 110113093 aacaaaatctaccttaccaatttttactttcatggattgtgtgtttgacctgtcaaaaaagtcatcactaa-acccaagaccaccaggattttttcctatattattttgtagaacttttatgtaaaaagtttgagatctatgtctagttttttggttgtttgtttgcatatggatgttcagttgtcccagcatcatttgttgaaaagactattctttctccatttaattgcttttgctcctttgtcaaagaacagttgactgtatctgtgtgggtctatttctgggcttactattctattccattgatctatttgtctcttcttttgccaacaccacgctgtcttgattactgtaactttacag---gtcttgaaatctggttgtgtcagtcctccaactttg----------------------------------------------------------------------------------------------------------------ttcttcagtattgtgttggccattctgggcattttgcctttccacatgcacttta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92809532 457 - 92844088 aacaagatccaccttgccaaattttactttcatggattgtatgtttgacttgtcaaaaaagtcatcactaa-acccaagaccaccaggattttctcctatattatcttgtagaacttttatataaaaagtttgagatctatgtctagtttttttgttttttgtttgcatgtggatgctcagttgtcccagaatcatttgttgaaaagactattctttatccatttaattgcttttgctcctttgtcaaagaacagttgaatgtatttgtgtgggtctgtttctgggcttactattttattccattgatctatttgtctcttcttttgccaaccccacactgtcatgattactgtaactttacag---gtcttgaaacctggttgtgtcagtcctcctactttg-------------------------------------------------------------------------------------------------------------ttcttctttagtattatgttggctattctgggcattttgcctttccatacacacttta i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96475057 457 + 96509753 aacaagatccaccttgccaaattttactttcatggattgtatgtttgacttgtcaaaaaagtcatcactaa-acccaagaccaccaggattttctcctatattatcttgtagaacttttatataaaaagtttgagatctatgtctagtttttttgttttttgtttgcatgtggatgctcagttgtcccagaatcatctgttgaaaagactgttctttatccatttaattgcttttgctcctttgtcaaagaacagttgaatgtatttgtgtgggtctgtttctgggcttactattttattccattgatctatttgtctcttcttttgccaaccccacactgtcatgattactgtaactttacag---gtcttgaaacctggttgtgtcagtcctcctactttg-------------------------------------------------------------------------------------------------------------ttcttctttagtattatgttggctattctgggcattttgcctttccatacacacttta i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16945127 457 - 16982598 aacaagatccaccttgccaaattttactttcatggattgtatgtttgacttgtcaaaaaagtcatcactaa-acccaagaccaccaggattttctcctatattatcttgtagaacttttatataaaaagtttgagatctatgtctagtttttttgttttttgtttgcatgtggatgctcagttgtcccagaatcatttgttgaaaagactattctttatccatttaattgcttttgctcctttgtcaaagaacagttgaatgtatttgtgtgggtctgtttctgggcttactattttattccattgatctatttgtctcttcttttgccaaccccacactgtcatgattactgtaactttacag---gtcttgaaacctggttgtgtcagtcctcctactttg-------------------------------------------------------------------------------------------------------------ttcttctttagtattatgttggctattctgggcattttgcctttccatacacacttta i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3747140 457 - 3785965 aacaagatccaccttgccaaattttactttcatggattgtatgtttgacttgtcaaaaaagtcatcactaa-acccaagaccaccaggattttctcctatattatcttgtagaacttttatataaaaagtttgagatctatgtctagtttttttgttttttgtttgcatgtggatgctgagttgtcccagaatcatttgttgaaaagactattctttatccatttaattgcttttgctcctttgtcaaagaacagtcgaatgtatttgtgtgggtctgtttctgggcttactattttattccattgatctatttgtctcttcttttgccaaccccacactgtcatgattactgtaactttacag---gtcttgaaatctggttgtgtcagtcctcctactttg-------------------------------------------------------------------------------------------------------------ttcttctttagtattatgttggctattctgggcattttgcctttccatacacacttta i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90336912 457 - 90373283 aacaagatccaccttgccaaattttactttcatggattgtatgtttgacttgtcaaaaaagtcatcactaa-acccaagaccaccaggattttctcctatgttatcttgtagaacttttatataaaaagtttgagatctatgtctagttttttggttttttgtttgcatgtggatgctcagttgtcccagaatcatttgttgaaaagactattctttatccatttaattgcttttgctcctttgtcaaagaacagttgaatgtatttgtgtgggtctgtttctgggcttactattttattccattgatctatttgtctcttcttttgccaaccccacactgtcatgattactgtaactttacag---gtcttgaaatctggttgtgtcagtcctcctactttg-------------------------------------------------------------------------------------------------------------ttcttctttagtattatgttggctattctgggcattttgcctttccatacacacttta i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 137850 457 - 179258 aacaagatccaccttgccaaattttactttcatggattgtatgttagacttgtcaaaaaagtcatcactaa-acccaagaccaccaggattttctcctatattatcttgtagaacttttatataaaaagtttgagatctatgtgtagcttttttgttttttgtttgcatgtggatgctcagttgtcccagaatcatttgttgaaaagactattctttatccatttaattgcttttgctcctttgtcaaagaacagttgaatgtatttgtgtgggtctgtttctgggcttactattttattccattgatctattcgtctcttcttttgccaaccccacactctcatgattactgtaactttacag---gtcttgaaatctggttgtgtcagtcctcctactttg-------------------------------------------------------------------------------------------------------------ttcttctttagtattatgttggctattctgggcattttgcctttccatacacacttta i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 93105 451 + 372756 aacaaaacccacctaaccaatttttactttcatggattgtgtgtgtgacttgtcaaaaaaaccatcactaa-tcccaatgccaccaggagtttctcctatattatcttctagaac-tttatgtaaaaact---agatctgtgtctagttttttgtttttttgtttgcatgtggatgttcagttgtcccagcatcatctgttgaaaagactattctttctccacttaattgcttttgctcctttgtcaaacaacagttgactg-atttgt----gtgtatttctggacttactgttacattccactgatccatttgtctcttcttttgccaacatcacaatgtctcgattattgtaacttcatagtatgtctcaaaatctggttgcgtcagtcctccaactttg-------------------------------------------------------------------------------------------------------------ttcttcttcagtattgtgttggctattctgggtattttgtctttctatgtaaacttta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16325992 432 + 16356641 gacaaaatccaccttaccaattgttattttcatggattgtgtgtttgacttgtcacaaaagccaccattaa-ccccaacgccaccaggaatttctcctatattatcttctagaac-tttatgtaaaaact---a-------gtctag--------ttttttgtttgcatgtggatattcagctgtcccagcatcatttgttgaaaagactattctttcgccacttaattgcttttgctcccttgtcaaagaacagttgactg-att--------tggatttctgggcttcctgtgacattccattgacccgtttgtctcttcttttgccaacatcacaatgtcttgattattttaactttacagtatgtcttgaaatctggttgcgtcagccctccaacttcg-------------------------------------------------------------------------------------------------------------ttcttcttcggtattgtgttggctgttctgggtattttgtctttccatataaacttta i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22895582 537 + 22939663 aaagaaa----------------------tcatggattgtgtgtttgatttgtctaaaaagtcatcactaacccccaacgtcacctagattttctcc--tgttatcttctaaaacttttatgtgaaaattatgagatctgtatctagatt-----catttttctaacatgtggatgtccaatagtcccagcatcatttgttgaaaagactatgctttctccatttaattgcttttattcctttgacaaagaacagttgaccatatttgtgtggctctatttctgtgctttctattctgtttcattggtctatttgtctattattttggcaatatcatgccgccttgactactgcaactttataataaaccttgaa----gacagtaccagtcctccaactttgttttttttttttttgcagtttttggccagggctgggttcgaacccgccacctctggcatatggggtcggtgccctactcctttgagccacaggcaccatcccaactttgtttttcttcaatattttgttggccattcaaggtattttcccttctcatataaatttta i otoGar3.GL873542 C 0 I 183 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1197282 1782 + 1231380 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I a score=438340.000000 s hg38.chr20_KI270870v1_alt 159532 63 + 183433 gaatcagtttgttgatatccatgaaataacttgctgaga-ttttgattggtgttgcattgaatc s panTro5.chr20 66494964 63 + 66533130 gaatcagtttgttgatatccatgaaataacttgctgaga-ttttgattggtgttgcattgaatc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62162423 63 + 62195757 gaatcagtttgttgatatccatgaaataacttgctgaga-ttttgattggtgttgcattgaatc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 548598 63 - 578057 gaatcagtttgttgataaccatgaaataacttgctgaga-ttttgattggtgttgcattgaatc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110070056 63 - 110113093 gaatcagcttgttgatatccatgaaataacttgctgaga-ttttgattggtgttgcattgaatc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92809989 63 - 92844088 gaatcagtttgttgatatccatgaaataacttgctaaga-ttttgattggtgttgcattgaatc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96475514 63 + 96509753 gaatcagtttgttgatatccatgaaataacttgctaaga-ttttgattggtgttgcattgaatc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16945584 63 - 16982598 gaatcagtttgttgatatccatgaaataacttgctaaga-ttttgattggtgttgcattgaatc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3747597 63 - 3785965 gaatcagtttgttgatatccatgaaataacttgctaaga-ttttgattggtgttgcattgaatc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90337369 63 - 90373283 gaatcagtttgttgatatccatgaaataacttgctaaga-ttttgattggtgttgcattgaatc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 138307 63 - 179258 gaatcagtttgttgatatccatgaagtaacttgctaaga-ttttgattggtgttgcattgaatc i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 93556 63 + 372756 gaatcagtttgttgatatccatgaaataacttgctgaga-ttttgactggcattgcattgaatc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16326424 64 + 16356641 gaatcagtttgttgatatccatgaaataacttgctgagatttttgactggtgttgtattgaatc i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1197282 1782 + 1231380 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I e otoGar3.GL873542 22896119 183 + 22939663 I a score=5657978.000000 s hg38.chr20_KI270870v1_alt 159595 858 + 183433 tacagattaagttggaaataactga-----------tagcactg------ctgagct----------------------------ttcctctccataaac-------atggaat------------------atctgtcta-------tgtaaat---atttgatgtcttttatgagagtttggtagttttcctcatatagaccttgtacct-attttgttaggtttat---------------gcctaagcatcccattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaattgttaattgctggtatataggaaagcaa--ctggcttttgttta-taaccttacatagtagtcccc----catctgtggttttgctttccatggtttcagttacctgcagtcaaccacaattcaaaaacattaattggaaaattac----agaaataattcataaattgtaaatcatgtgctattctgagtagtgtgatgaaatctcgtgccgtcctgctccatgctac---ccagtacgtgtgccacctttctgttcagcatatccatgccatatacactacctgcccattaatcacttagtagctaacagagagaccacactcatgtaacttttattacaatatattgttatagttgttcgattttattattagttattgttgttaatctcttgctatgcctaatttataaattaaactttatcatagatgatccatatgtaggaaaaaacatagtatatatagggtttgattccatccctggtttcaagcattcctatatgtactatagagtttggtacatatccccaacagtgtcttagaacatatcccctaaggataag---gggggggactgctgtatccagcaaccttgctgtagtcagt--tattagtttctggagttttatt--ggagattcttcagggtataatacacagttaatc s panTro5.chr20 66495027 859 + 66533130 tacagattaagttggaaataactgg-----------tagcactg------ctgagtt----------------------------ttcctctccataaac-------atggaat------------------atctgtcta-------tgtaaat---atttgatttcttttatgagagtttggtagttttcctcatatagatcttgtacctaattttgttaggtttat---------------gcctaagcatcccattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaattgttaattgctggtatataggaaagcaa--ctggcttttgttta-taaccttacatagtagtcccc----catctgtggttttgctttccacggtttcagttacctgcagtcaaccacaattcaaaaacattaattggaaaattac----agaaataattcataaattgtaaatcatgtgctattctgagtagtgtgatgaaatctcgtgccgtcctgctccatgctac---ccagtacgtgcgccacctttctgttcagcatatccatgccatatacactacctgcccattaatcacttagtagctaacagagagaccacattcatgtaacttttattacagtatattgttatagttgttcaattttattattagttattgttgttaatctcttgctatgcctaatttataaattaaactttatcatagatgatccatatgtaggaaaaaacatagtatatatagggtttgattccatccctggtttcaagcattcctatatgtactatagggtttggtacatgtccccaacagtgtcttagaacatatcccctaaggataag---gggggggactgctgtatccagcaaccttgctgtagtcagt--tattagtttctggagttttatt--ggagattcttcagggtacaatacacagttaatc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62162486 859 + 62195757 tacagattaagttggaaataactgg-----------tagcactg------ctgagtt----------------------------ttcctctccataaac-------atggaat------------------atctgtcta-------tgtaaat---atttgatttcttttatgagagtttggtagttttcctcatatagaccttgtacctaattttgttaggtttat---------------gcctaagcatcccattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaattgttaattgctggtatataggaaagcaa--ctggcttttgttta-taaccttacatagtagtcccc----catctgtggttttgctttccatggtttcagttacctgcagtcaaccacaattcaaaaacattaattggaaaattac----agaaataattcataaattgtaaatcatgtgctattctgagtagtgtgatgaaatctcgtgccgtcctgctccatgctac---ccagtacgtgcgccacctttctgttcagcatatccatgccatatacactacctgcccattaatcacttagtagctaacagagagaccacattcatgtaacttttattacagtatattgttatagttgttcaattttattattagttattgttgttaatctcttgctatgcctaatttataaattaaactttatcatagatgatccatatgtaggaaaaaacatagtatatatagggtttgattccatccctggtttcaagcattcctatatgtactatagggtttggtacatgtccccaacagtgtcttagaacatatcccctaaggataag---gggggggactgctgtatccagcaaccttgctgtagtcagt--tattagtttctggagttttatt--ggagattcttcagggtacaatacacagttaatc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 548661 856 - 578057 tatagattaagttggaaataactga-----------tagcactg------ctgagtt----------------------------ttcctctccataaac-------atggaat------------------atctatcta-------tgtaaat---atttgatttcttttatgagagtttggtagttttcctcatatagaccttgtacct-attttgttaggtttac---------------gcctaagcatcacattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaattgttaattgctggtatataggaaagcaa--ctggcttttgttta-tagccttacatagtagtcccc----catctgtggttttgctttccatggtttcggttacctgcagtcaaccacaattcaaaaacattaattggaaaattac----agaaataattcataaattgtaaatcatgtgctattctgagtagtgtgatgaaatctcgtgccgtcctgctccgtgctac---ccagtacgtgcgccacctttctgttcagcatctccatgccatatacactagctgcccattaatcacttagtagctaacagagagaccacattcgtgtaacttttattacagtatattgttatagttgttcaattttattattagttattgttgttaatctcttgctgtgcctaatttataaattaaactttatcatagatgatccatatgtaggaaaaaacatagcatatatagggtttgattccatccctggtttcaagcattcctatatgtactacagggtttggtacatatccccaaccgtgtcttagaacatatcccctaaggataa-----ggggggactgctgtatccagcaaccttgctgtagtcagt--tattagtttctggagttttatt--ggagattcttcagggtataatacacagttaatc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110070119 801 - 110113093 tacagattaagttggaaataactga-----------tagcactg------ctgattt----------------------------ttcctctccataaac-------atggaat------------------atctgtcta-------tgtaaat---atttgatttcctttatgagagtttggtagttttcatcatatagaccttgtacct-attttgttaggtttac---------------gcctaagcatcccattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaattgttaattgctgatatataggaaagcaa--ctggcttttgttta-taaccttacatcgtagtcccc----catctgtggttttgctttccatggtttcggttaccagcagtcaaccacaattcaaaaatattaattggaaaattac----agaaataattcataaattttaaattgtgtgctattctgagcagtgtgatgaaatctcgtgccgtcctgctccatgctac---ccagtacatgcgccacctttctgttcagcatatccatgccatatacactacctgcccattaatcactgagtagctgacagagagaccacattcatgtaacttttattccagtatattgttataattgttcaattttattattagttattgttgttaatctcttgctatgcctaatttataaattaaactttatcatagatgatc--------------------------------------------------------cattcctatatgtactctagggtttggtacgtatccccaacagtgtcttagaacatatcccctacggatga----ggggggaactgctgtatccagcaaccttgctgtagtcagt--tattagtttcaggagttttact--ggagattcttcagggtataatacacagttaatc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92810052 850 - 92844088 tacagattaagttggaaagaactga-----------tagcactg------ctgagtt----------------------------ttcctctccataaac-------atggaat------------------atctgccta-------tgtaaat---atttgatttcttttatgagagtttggcagttttccacatatagaccttgtactt-attttgttaggcttac---------------gcctaagcatcccattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaatcgttcattgctggtctataggaaagcaa--ttggcttttgtttattaaccttacatagtagtcccc----catctgtggttttgctttccatggtttcagttacctgcagtcaaccacaattcaaaaatattaattggaaaattac----agaaataattaataaatgttaaactgtgtgctattctgagtagtgtgatgaaatctcgtgccgtcctgctctatgctac---ccagtatatgcgccacctttctgttcagcatatccgtgccatatacactacttgcctattaatctctctgtgg-tgacagagagaccacattcatgtagcttttattacagtatattgttataattgttcaactgtattattagttactgttgttaatctcttgctatgcctaatttataaattaaactttatcatagatgatcc------aggaaaaaacataatatatatagggtttgattccatccctggtttcaagcattcgtatatgtactatagggtttggtacatatccccgacagtgtcttagaatgtatctcctaaggataa-----ggggggactgctgtatccagcaacctggctgtagtcact--ccttagttttaggagttttact--ggagattcttcagggtataatacacagttaatc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96475577 850 + 96509753 tacagattaagttggaaagaactga-----------tagcactg------ctgagtt----------------------------ttcctctccataaac-------atggaat------------------atctgccta-------tgtaaat---atttgatttcttttatgagagtttggcagttttccacatatagaccttgtactt-attttgttaggcttac---------------gcctaagcatcccattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaatcgttcattgctggtctataggaaagcaa--ttggcttttgtttattaaccttacatagtagtcccc----catctgtggttttgctttccatggtttcagttacctgcagtcaaccacaattcaaaaatattaattggaaaattac----agaaataattaataaatgttaaactgtgtgctattctgagtagtgtgatgaaatctcgtgccgtcctgctctatgctac---ccagtatatgcgccacctttctgttcagcatatccgtgccatatacactacttgcccattaatctctctgtgg-tgacagagagaccacattcatgtagcttttattacagtatattgttataattgttcaactgtattattagttactgttgttaatctcttgctatgcctaatttataaattaaactttatcatagatgatcc------aggaaaaaacataatatatatagggtttgattccatccctggtttcaagcattcgtatatgtactatagggtttggtacatatccccgacagtgtcttagaatgtatcccctaaggataa-----ggggggactgctgtatccagcaacctggctgtagtcact--ccttagttttaggagttttact--ggagattcttcagggtataatacacagttaatc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16945647 850 - 16982598 tacagattaagttggaaagaactga-----------tagcactg------ctgagtt----------------------------ttcctctccataaac-------atggaat------------------atctgccta-------tgtaaat---atttgatttcttttatgagagtttggcagttttccacatatagaccttgtactt-attttgttaggcttac---------------gcctaagcatcccattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaatcgttcattgctggtctataggaaagcaa--ttggcttttgtttattaaccttacatagtagtcccc----catctgtggttttgctttccatggtttcagttacctgcagtcaaccacaattcaaaaatattaattggaaaattac----agaaataattaataaattttaaactgtgtgctattctgagtagtgtgatgaaatctcgtgccgtcctgctctatgctac---ccagtatatgcgccacctttctgttcagcatatccgtgccatatacactacttgcccattaatctctctgtgg-tgacagagagaccacattcatgtagcttttattacagtatattgttataattgttcaactgtattattagttactgttgttaatctcttgctatgcctaatttataaattaaactttatcataaatgatcc------aggaaaaaacataatatatatagggtttgattccatccctggtttcaagcattcgtatatgtactatagggtttggtacatatccccgacagtgtcttagaatgtatcccctaaggataa-----ggggggactgctgtatccagcaacctggcggtagtcact--ccttagttttaggagttttact--ggagattcttcagggtataatacacagttaatc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3747660 850 - 3785965 tacagattaagttggaaagaactga-----------tagcactg------ctgagtt----------------------------ttcctctatataaac-------atggaat------------------atctgccta-------tgtaaat---atttgatttcttttatgagagtttggcagttttccacatatagaccttgtactt-attttgttaggcttac---------------gcctaagcatcccattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaatcgttcattgctgctctataggaaagcaa--ttggcttttgtttattaaccttacatagtagtcccc----catctgtggttttgctttccatggtttcagttacctgcagtcaaccacaattcaaaaatattaattggaaaattac----agaaataattaataaattttaaactgtgtgctattctgagtagtgtgatgaaatctcgtgccgtcctgctctatgctac---ccagtatatgcgccacctttctgttcagcatatccgtgccatatacactacttgcccattaatctctctgtgg-tgacagagagaccacattcatgtaacttttattacagtatattgttataattgttcaactgtattattagttactgttgttaatctcttgctatgcctaatttataaattaaactttatcatagatgattc------aggaaaaaacataatatatatagggtttgattccatccctggtttcaagcattcgtatatgtactatagggtttggtacatatccccgacagtgtcttagaatgtatcccctaaggataa-----ggggggactgctgtatccagcaacctggctgtagtcact--ccttagttttaggagttttact--ggagattcttcagggtataatacacagttaatc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90337432 849 - 90373283 tacagattaagttggaaagaactga-----------tagcactg------ctgagtt----------------------------ttcctctccataaac-------atggaat------------------atctgccta-------tgtaaat---atttgatttcttttatgagagtttggcagttttccacatatagaccttgtacct-attttgttaggtttac---------------gcctaagcatcccattttttggtgctattgtaaacagtattgta-ttttaatttaaaattccaatcgttcattgctggtctataagaaagcaa--ttggcttttgtttattaaccttacacagtagtcccc----catctgtggttttgctttccatggtttcagttacctgcagtcaaccacaattcaaaaatattaattggaaaattac----agaaataattaataaattttaaactgtgtgctattctcagtagtgtgatgaaatctcatgccgtcctgctctatgctac---ccagtacatgcgccacctttctattcagcatatccgtgccatatacactacttgcccattaatctctctgtgg-tgacagagagaccacattcatgtaacttttattacagtatattgttataattgttcaattgtattattagttattgttgttaatctcttgctatgcctaatttataaattaaactttatcatagatgatcc------aggaaaaaacataatatatatagggtttgattccatccctggtttcaagcattcgtatatgtactatagggtttggtacatatccccgacagtgtcttagaatgtatcccctaaggataa-----ggggggactgctgtatccagcaacctggctgtagtcact--tcttagttttaggagttttact--ggagattcttcagggtataatacacagttaatc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 138370 850 - 179258 tacagattaagttggaaagaactga-----------tagcactg------ctgagtt----------------------------ttcctctccataaac-------atggaat------------------atctgccta-------tgtaaat---atttgatttcttttatgagagtttggcagttttccacatatagaccttgtactt-attttgttaggcttac---------------gcctaagcatcccattttttggtgctattgtaaacagtattgtatttttaatttcaaattccaatcgttcattgctggtctataggaaagcaa--ttggcttttgtttattaaccttacatagtagtcccc----catctgtggttttgctttccatggtttcagttacctgcagtcaaccacaattcaaaaatattaattggaaaattac----agaaataattaataaattttaaactgtgtgctattctgagtagtgtgatgaaatctcgtgccgtcctgctctatgctac---ccagtatatgcgccacctttctgttcagcatatccgtgccatatacactacttgcccattaatctctctgtgg-tgacagagagaccacattcatgtaacttttattacagtatattgttataattgttcaactgtattattagttactgttgttaatctcttgctatgcctaatttataaattaaactttatcatagatgatcc------aggaaaaaacataatatatatagggtttgattccacccctggtttcaagcattcgtatatgtactatagggtttggtacatatccccgacagtgtcttagaatgtatcccctaaggataa-----ggggggactgctgtatccagcaacctggctgtagtcact--ccttagttttaggagttttact--ggagattcttcagggtataatacacagttaatc i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 93619 871 + 372756 tctaaattaagttgtaaagagctga---tatct---tagcacca------ctgagtt----------------------------tttctatccatgaac-------atggaat------------------atctgtaaatattggctttaaat---atttgatttattttctgagagctttgtagttttcctcatatagatcttgtact---ttttttaaggtttat---------------gcctaagcatcacattttttggtgttattgtaaacattattgcatttttaatttcgaagtccaattgttcattgctggtatataggaaagcaattttggcttttgtttattaaccttacatagtagtcccc----catctatggttttgctttccatgtttttagttacctgcagtcaaccacaatttaaaaatattaatttgaaaattac----agaaataatttgtacattttaaattgagtgctattctgagtagtgtgatgaaatatcgtgccatcctgctccatgctgcagaacagtacatgagtcacatttctgttctgcatacccacaccatacacactacctgcccattaatcacttaatagct----gagaggccacattcatgcaacttttattacagtacattgctataattgttcaatt---ttattagttac---tgttaatcttttgctatgcccaatttataaattaaactttatcacagatgatccatatagaggaaaaagcatagtatataaaggatttgattctatccctggttttaagcattcctatatgtactacagggtctggtacagatccctgacagggtcttagaacatatcccctaaggataaggtaggggggcactactagatccagcaactctgctgtagtcacttgtattagtttcaggagttttttttggtagtatcttcaggatataatatacagtttatc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16326488 868 + 16356641 tctagattaagttggaagaaactga---tatct---tagcacca------ctgagtt----------------------------ttcctatccataaac-------atggaat------------------atctgtcta-------tttaagt---atttgacttattttctgagagctttgtagttttcctcatatagatcttgtact--gctttgttaggtttat---------------gcctaagcatcacattttttgctattattgtcaacagtattgcatttttaatctcaaagtccaattgttcattgctggtgtataggaaagcaattttggcttttgtttattaatgttacatagtagtcccc----catctatggttttgctttccatgtttttagttagcggcagtcaaccacaatttaaaaatattaattggaaaattac----agaaataatttgtacattttaaattgagtgctattctgagtagtgtgatgaaatcttacgccttcctgctccatgctgc---ccggtacatgagtcacgtttctgttctgcatacccatgccatatacactacctgcccactaatcacttaatagctgagagagaggccacattcatgtaacttttattacagtacattgttataattgttcaattttattattagttat---tgtgaatcttttgctatgcctaatttataaattaaactttatcatagatgatccatatagaggaaaaaacacggtatatataggacttgcttctgtccctggtttcaggcatccgtgtatgtactacagggcctggtacataccccTGACAGGATCTTAGAACATGTCCCCTAAGGATAAGGT-GGGGGGTGTTACtggatccagcaactctgctgtagtcacttttattagtttcaggagttatttttggtagagtcctcaggatatgatatacagtttatc i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22896302 876 + 22939663 cccaggctgagtttgaaccacctcagtgtatgtggctggcactgtaaccactgtgctataggcgccgagccataaaaagagtttgttcatatccacaaaataacttgctgaaattttgattagaattgcaccatccattta-------tgtagatctcctttgatttctttcatcagagttttatagtcctcctcatatagctcttgtactt-gttttgttagatttacctaagtacctaatatacctaagcatttcattttctggtgctactgcacatagcattgtgtttttaaatccaaattccaataattcattgctggtatatagaaaagcaa--gcaactt-------------ttacatatCAGTCcccccctcatccatggcttcactttccatggtttcagttacctgcagccaaccatgatctaaaaatatttaatggaaaatccccaaaataaacaattcataagttttaaattgtgtgccattct---tagtgtgatgaaatttaatgccatgctgctctatactac---ccaagacgtgaatcatccctttgtccagcgtatccacactgtatactctacctgcccattagtcacttagtagcTCaaaaagggaccacatttacataacttttattacagtgcattgtcataattgttctattttattattggtt----ttggtaatatcttactatgcct-------------aacttcatcatag----------tatagggaaaa--atagtgtatatagtgtttggtagtatccatagtattagacTTTCTTATATATACCATAGG--------------------AGTTTCCCAT------TCCCCCAA--ATAA-----AGAGTATCTACtgtatcccataatct---tgtgatcact--tattgatcctaggagtgtt-ct--gtagagttttttggatagtatacacattcaacc i otoGar3.GL873542 I 183 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e colAng1.NW_012114444v1 5608556 5 - 5823884 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1197282 1782 + 1231380 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I a score=2021607.000000 s hg38.chr20_KI270870v1_alt 160453 248 + 183433 ttaccacctgtgcaaaaagacagttttatttcttccttctaaa-tctgtaacccttattt-------tcaagtcttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggacattcctgccttgttcctgatcttaaggagaaagggtccactttctcaccattaagtatgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgcccctctctctattact s panTro5.chr20 66495886 244 + 66533130 ttaccacctgtgcacaaagacagtttcatttcttccttctaaa-tctgtaacccttattt-------tcaagtcttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggacattcttgccttgttcctgatcttaaggagaaagggtccactttctcaccattaagtatgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgccc----ctctattact i panTro5.chr20 C 0 C 0 s panPan2.chr20 62163345 244 + 62195757 ttaccacctgtgcacaaagacagtttcatttcttccttctaaa-tctgtaacccttattt-------tcaagtcttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggacattcttgccttgttcctgatcttaaggagaaagggtccactttctcaccattaagtatgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgccc----ctctattact i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 549517 248 - 578057 tcaccacctgagcacaaagacagtttcatttcttccttctaaa-tctgtaacccttattt-------tcaagtcttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggacattcttgccttgttcctgatcttaaggagaaagggtccactttctcaccattaagtatgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgcccctctctctattact i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110070920 243 - 110113093 ttaccacctgtgcacaaagacagtttcatttcttccttctaaa-tctgtagcccttattt-------tcaagtcttattgcatcagctaggactt-ctatatgatgttgaacagaagcagtgagaggggacattcttgccttgtttctgatcttaaggagaaagggtccacttt-tcaccattaagtatgatattagctgttggttttccgtagatgttctttatcaagttgaggaaatgccc----ctctattact i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92810902 244 - 92844088 ttatcacctgtgcacaaagacagtttcatttcttctttccaaattttgtaacccttgttt-------tcacg-cttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggacattcttgccttattcctgaacttaaggagaaagggtccactttctcaccattaggtacgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgccc----ctctattact i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96476427 244 + 96509753 ttatcacctgtgcacaaagacagtttcatttcttctttccaaattttgtaacccttgttt-------tcacg-cttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggacattcttgccttattcctgaacttaaggagaaagggtccactttctcaccattaggtacgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgccc----ctctattact i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16946497 244 - 16982598 ttatcacctgtgcacaaagacagtttcatttcttctttccaaattttgtaacccttgttt-------tcacg-cttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggacattcttgccttattcctgaacttaaggagaaagggtccactttctcaccattaggtatgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgccc----ctctattact i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3748510 244 - 3785965 ttatcacctgtgcacaaagacagtttcatttcttctttccaaattttgtaacccttgttt-------tcacg-cttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggacattcttgccttgttcctgaacttaaggagaaagggtccactttctcaccattaggtatgatattagctgttggttttctgtagatgttctttatgaagttgaggaaatgccc----ctctattact i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90338281 244 - 90373283 ttatcacctgtgcacaaagacagtttcatttcttccttccaaa-tttgtaacccttgttt-------tcacgtcttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggacattcttgccttgttcctgatcttaaggagaaagggtccactttctcaccattaggtatgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgccc----ctctattact i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 139220 244 - 179258 ttatcacctgtgcacaaagacagtttcatttcttctttccaaattttgtaacccttgttt-------tcacg-cttattgcatcagctaggactt-ctatatgatgttgaacagaagtagtgagaggggatattcttgccttgttcctgaacttaaggagaaagggtccactttctcaccattaggtatgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgcct----ctctattact i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5608561 244 - 5823884 Ttatcacctgtgcacaaggacagtttcatttcttctttccaaa-tttgtaacccttattt-------tcacgtcttattgcatcagctaggactt-ctatatgatgttgaacagaagtagagagaggggacattcttgccttattcctgatcttaaggagaaagggtccactttctcaccattaagtatgatattagctgttggttttctgtagatgttctttatcaagttgaggaaatgccc----ctctattact i colAng1.NW_012114444v1 I 5 C 0 s calJac3.chrUn_GL286459 94490 244 + 372756 ttatcatctgtgcacaaagacagtttcatttcttccttctaaa-tctgtaaaccttattt-------tcatgtcttattgcatcagctaggactt-ctatatgatcttgaacagaagtagtgagaggggacattcttgccttattgctgttcttaaggggaaaaggtccactttctcaccattaagtatgatataagctgttggttttgcgtagatgttctttatcaagttgaggaagtgccc----ctccattact i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16327356 244 + 16356641 ttatcatctgtgcacaaagacagcttcatttcttccttcccaa-tctgtataccttattt-------ccatgtcttattgcatgagctaggactt-ctatatgatgttgaacagaagtagtgagagcggacattcttgccttattcctgttcttaaggagaaaaggcccactttcttaccattaagtatgatataagctgttggttttgtgtagatgttctttatcaagttgaggaaatgccc----ctccattact i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22897178 221 + 22939663 ttgtcatttgtaaacaaagacagttttatttcttccttccaaa-tctgtataccttattttgccttctctagtcttattgtatcaactacaacttacagtacaatgatgaacagttgtagtgagaggggtcattcttgccttattcctgatcttaaggataaagtacccagtttctcctcattaagt---atattaactgt---------gtagattttatttattaagttgag----------------------- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1197282 1782 + 1231380 I e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I a score=617667.000000 s hg38.chr20_KI270870v1_alt 160701 123 + 183433 agctgggtgagaatttttttttttttttttttgagatggagtctcactctgtcgcccaggctggagtgcagtggtgcgatctcggctcactgcaaccgccgactccctggtttaaactattct s panTro5.chr20 66496130 121 + 66533130 agctgggtgagaa--tttttttttttttttttgagatggagtctcactctgttgcccaggctggagtgcagtggtgcgatctcggctcactgcaaccgccgactccctggtttaaactgttct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62163589 122 + 62195757 agctgggtgagaa-ttttttatttttttttttgagatggagtctcactctgttgcccaggctggagtgcagtggtgcgatctcggctcactgcaaccgccgactccctggtttaaactgttct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 549765 114 - 578057 agctgggtgagaa---------ttttttttttgagatggagtctcactctgtcgcccaggctggagtgcaatggtgcgatctcggctcactgcaaccgccgactccctggtttaaactattct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110071163 120 - 110113093 agctgggtgagaa--ttttttttgttttttttgagatggagtctcactctgtcg-ccaggctggagtgcagtggtgcgatctcggctcactgcaaccgccgactccctggttcaaactatttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92811146 123 - 92844088 agctgggtgagaattttttatttttattttttgagacagagtctctctctgtggcccaggcaggagtgcagtggtgtgatctcggctcactgcaaccgccaactccctggttcaagctattct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96476671 123 + 96509753 agctgggtgagaattttttatttttattttttgagacagagtctcgctctgtggcccaggcaggagtgcagtggtgtgatctcggctcactgcaaccgccaactccctggttcaagctattct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16946741 123 - 16982598 agctgggtgagaattttttatttttattttttgagacagagtctcgctctgtggcccaggcaggagggcagtggtgtgatctcggctcactgcaaccgccaactccctggttcaagctattct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3748754 123 - 3785965 agctgggtgagaattttttatttttattttttgagacagagtctcgctctgtggcccaggcaggagtgcagtggtgtgatctcggctcactgcaaccgccaactccctggttcaagctattct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90338525 123 - 90373283 agctgggagataattttttatttttattttttgagacagagtctcgctctgtggcccaggcaggagtgcagtggtgcgatctcggctcactgcaaccgccaactccctggttcaagctattct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 139464 123 - 179258 agctgggtgagaAttttttatttttattttttgagacggagtctcgctctgtggcccaggcaggagtgcagtggtgtgatctcggctcactgcaaccgccaactccctggttcaagctattct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5608805 123 - 5823884 agctgggagagaattttttatttttattttttgagacagagtctcgctctgtggcccaggcaggagtgcagtggtgcgatcttggctcactacaaccaccaactccctggtgcaagctattct i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22897399 19 + 22939663 -------------------------------------gaagttcccctctat-------------------------------------------------------------------ttct i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16327600 0 + 16356641 C e cebCap1.NW_016107870v1 1197282 1782 + 1231380 I e calJac3.chrUn_GL286459 94734 0 + 372756 C e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I a score=973140.000000 s hg38.chr20_KI270870v1_alt 160824 176 + 183433 cctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgaccggctaatgtttgtatttttagtggagacggggtttcgccatgttggtcaggatggtctcaatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggatgacaggtgtgagcc s panTro5.chr20 66496251 176 + 66533130 cctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgaccggctaatgtttgtatttttagtagagatggggttttgccatgttggccaggatggtctcaatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggatgacaggtgtgggcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62163711 176 + 62195757 cctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgactggctaatgtttgtatttttagtagagatggggttttgccatgttggccaggatggtctcaatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggatgacaggtgtgggcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 549879 176 - 578057 cctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgaccagctaatttttgtatttttagtagagatggggtttcgccatgttggccaggatggtctcaatctcctgacctcatgatccgcctgcctcagcctcccaaagtgctgggatgacaggtgtgagcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110071283 176 - 110113093 cctgcctcagcctcccaagtagctgggattacaggcatgcgccaccacgcccggctaatttttgtatttttagtagagatgggttttcaccatgttggccaggatggtctcaatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92811269 176 - 92844088 cctgcctcaccctcccgagtagctgggattacagatacatgtcaccatgcccggctaatttttgtatttttagtagagacagggtttcaccgtgttggccaggatggtctcaatctcctgaccttctgatctgcccaccttggcctcccatagtgctgggattataggcatgagcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96476794 176 + 96509753 cctgcctcaccctcccgagtagctgggattacagatacatgtcaccatgcccggctaatttttgtatttttagtagagacagggtttcaccgtgttggccaggatggtctcaatctcctgaccttctgatctgcccacctcggcctcccatagtgctgggattataggcatgagcc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16946864 176 - 16982598 cctgcctcaccctcccgagtagctgggattacagatacatgtcaccatgcccggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggatggtctcaatctcctgaccttgtgatctgcccacctcggcctcccatagtgctgggattataggcatgagcc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3748877 176 - 3785965 cctgcctcaccctcccgagtagctgggattacaggtacacgtcaccatgcccggctaatttttgtatttttagtagagacagggtttcaccatgttggccaggatggtctcaatctcctgaccttgtgatctgcccacctcggcctcccatggtgctgggattataggcatgagcc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90338648 176 - 90373283 cctgcctcaccctcccgagtagctgggattacaggtacacgtcaccatgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggatggtctcaatctcctgaccttgtgatctgcccacctcggcctcccatagtgctaggattataggcatgagcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 139587 176 - 179258 cctgcctcaccctcccgagtagctgggattacaggtacacgtcaccatgcccggctaatttttgtatttttagtagagacagggtttcatcatgttggccaggatggtctcaatctcctgaccttgtgatctgcccacctcggcctcccatagtgctgggattataggcatgagcc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5608928 176 - 5823884 cctgcctcaccctcccgagtagctgggattacaggtacacgtcaccatgcccggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctcaatctcctgaccttgtgatctgcccacctcggccttccgtagtgctgggattataggcatgagcc i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16327600 0 + 16356641 C e cebCap1.NW_016107870v1 1197282 1782 + 1231380 I e calJac3.chrUn_GL286459 94734 0 + 372756 C e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I e otoGar3.GL873542 22897418 0 + 22939663 C a score=45260.000000 s hg38.chr20_KI270870v1_alt 161000 11 + 183433 actgtgctcag s panTro5.chr20 66496427 11 + 66533130 actgtgctcag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62163887 11 + 62195757 actgtgctcag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 550055 11 - 578057 actgtgcccgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110071459 11 - 110113093 acggcgcccgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92811445 11 - 92844088 accctgcttgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96476970 11 + 96509753 accctgcttgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16947040 11 - 16982598 accctgcttgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3749053 11 - 3785965 accctgcttgg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90338824 11 - 90373283 accctgcgtgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 139763 11 - 179258 accCTGGTTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5609104 11 - 5823884 accctgcttgg i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22897418 11 + 22939663 actttgctaag i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16327600 0 + 16356641 C e cebCap1.NW_016107870v1 1197282 1782 + 1231380 I e calJac3.chrUn_GL286459 94734 0 + 372756 C e aotNan1.NW_018500483v1 2727554 2927 + 11732439 I a score=12900.000000 s hg38.chr20_KI270870v1_alt 161011 2 + 183433 cc s panTro5.chr20 66496438 2 + 66533130 cc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62163898 2 + 62195757 cc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 550066 2 - 578057 cc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110071470 2 - 110113093 gc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92811456 2 - 92844088 cc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96476981 2 + 96509753 cc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16947051 2 - 16982598 cc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3749064 2 - 3785965 cc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90338835 2 - 90373283 cc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 139774 2 - 179258 CC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5609115 2 - 5823884 cc i colAng1.NW_012114444v1 C 0 C 0 s aotNan1.NW_018500483v1 2730481 2 + 11732439 cc i aotNan1.NW_018500483v1 I 2927 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16327600 0 + 16356641 C e cebCap1.NW_016107870v1 1197282 1782 + 1231380 I e calJac3.chrUn_GL286459 94734 0 + 372756 C e otoGar3.GL873542 22897429 0 + 22939663 C a score=370417.000000 s hg38.chr20_KI270870v1_alt 161013 37 + 183433 agctgggtgagaatttttaacacgaatgggtatggag s panTro5.chr20 66496440 37 + 66533130 agctgggtgagaatttttaacatgaatgggtatggag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62163900 37 + 62195757 agctgggtgagaatttttaacatgaatgggtatggag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 550068 37 - 578057 agccgggtgagaatttttaacatgaatgggtatggag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110071472 37 - 110113093 agctgggtgagaatttttaacatgaatgggtatggag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92811458 37 - 92844088 agctaggtgagaatttttaacatgaacgggtatggag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96476983 37 + 96509753 agctgggtgagaatttttaacatgaacgggtatggag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16947053 37 - 16982598 agatgggtgagaatttttaacatgaacgggtatggag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3749066 37 - 3785965 agctgggtgagaatttttaacatgaacgggtatggag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90338837 37 - 90373283 agctgggtgagaatttttaacatgaacgggtatggag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 139776 37 - 179258 AGCTGGGTGAGAATTTTTAACATGaacgggtatggag i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5609117 37 - 5823884 agctgggtaagaaattttaacatgaacgggtatggag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 94734 37 + 372756 agctggccgagaatctttaacgtgaatgggtatagag i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16327600 35 + 16356641 agctggctgagaatttttaATGTGaatggg--tagag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1199064 37 + 1231380 agctggctgagaatttttaATGTGaatgggtatagag i cebCap1.NW_016107870v1 I 1782 C 0 s aotNan1.NW_018500483v1 2730483 37 + 11732439 agctggctgtgaatttttaacgtgaatgggtatagag i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22897429 27 + 22939663 ----------aattttttagcataaatggatccagag i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47645293 1286 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=2675792.000000 s hg38.chr20_KI270870v1_alt 161050 280 + 183433 ttgcagttaggcatgatgaaaaaaa-tgtggagctggatagtagtga-ggttgcacaatagtg-taaatgtacttca-----------tgtacacttaaaaatggttcaaatgataaatgttttg-----------------------------------tatactttaccatagt--aag--------------------------------------------------aaTAGTGTATTTCGAAGACAACAACACAACCTCCCACATGTGGCTCTAGCTACTtg---------ctccccagatacccagccgcacccctgcctcaggcccttgcatgaccttccctccgt-ccgaggctcctcctgcagataCAACACAGATGAGTGG s panTro5.chr20 66496477 281 + 66533130 ttgcagttgggcatgatgaaaaaaa-tgtggagctggatagtagtga-ggttgcacaatagtg-taaatgtacttca-----------tgtacacttaaaaatggttcaaatgataaatgttttg-----------------------------------tatactttaccataat--aag--------------------------------------------------aaTAGTGTATTTCGAAGACAACAACACAAcctcccacatgtggctctagccacttg---------ctccccagatacccagccgcacccctgcctcaggcccttgcatgaccttccctccgtcccgaggctcctcctgcagataCAACACAGATGAGTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62163937 281 + 62195757 ttgcagttgggcatgatgaaaaaaa-tgtggagctggatagtagtga-ggttgcacaatagtg-taaatgtacttca-----------tgtacacttaaaaatggttcaaatgataaatgttttg-----------------------------------tatactttaccataat--aag--------------------------------------------------aaTAGTGTATTTCGAAGACGACAACACAACCTCCCACATGTGGCTCTAGCCACTTG---------CTCCCCAGATACCCAGCCGCACCCCTGCCTCAGGCCCTTGCATGACCTTCCCTCCCTCCGGAGGCTCCTCCTGCAGATACAACACAGATGAGTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 550105 281 - 578057 ttgcagttgggcatgatgaaaaaaa-tgtgaagctggatagtagtga-ggttgcacaatagtg-taaatgtacttca-----------tgtacacttaaaaatggttaaaatgataaatgttttg-----------------------------------tatactttaccataat--aag--------------------------------------------------aaTAGTGTATTTCGAAGACAACAACGCAACCTCCCACATGTGGCTCTAGCCACTTG---------CTCCCCAGATACCCGGCCGCACCCCTGCCTCAGGCCCTTGCATGACCTTCCCTCCGTCCCGAGGCTCCTCCTGCAGATACAACACAGATGAGTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110071509 280 - 110113093 ttgcagttgggcatgatg-aaaaaa-tgtggagttggatagtagtga-ggttgcacaatagtg-taaatgtacttca-----------tgtacacttaaaaatagttaaaatgataaatgttttg-----------------------------------tatactttaccataat--aag--------------------------------------------------aaTAGTGTATTTCGAAGACAACAACACAACCTCCCACATGTGGCTCTAGCCACTTG---------CTCCCCAGATACCTGGCCACACCCCTGCCTCAGGCCCTTGCATGACCTTCCCTCCGTCCCGAGGCTCCTCCTGCAGATACAACAAAGATGAGTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92811495 278 - 92844088 ttccacttgggcatgatgaaaaaaa-tgtggagctggatagtagtga-ggttgcacaagaatg-tcagtgtacttca-----------tgtacacttaaaaatggttaaaatgataaatattttg-----------------------------------tatattttaccataat--aag--------------------------------------------------aaTAGGGTATTTTGAAGACAACAACACAACCTCCCACATGTGGCTCTAGCCACTTG---------CACTCCAGATACCCGGCCGCACCC--GTCTCAGGCCCTTGCACGACCTTCCCTCTGTCCCAAGGCTCCT-CTGCAGATACGACAAAGATGAGTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96477020 278 + 96509753 ttccacttgggcatgatgaaaaaaa-tgtggagctggatagtagtga-ggttgcacaagaatg-tcagtgtacttca-----------tgtacacttaaaaatggttaaaatgataaatattttg-----------------------------------tatattttaccataat--aag--------------------------------------------------aaTAGGGTATTTTGAAGACAACAACACAACCTCCCACATGTGGCTCTAGCCACTTG---------CACTCCAGATACCCGGCCGCACCC--GTCTCAGGCCCTTGCACGACCTTCCCTCTGTCCCAAGGCTCCT-CTGCAGATACGACAAAGATGAGTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16947090 278 - 16982598 ttccacttgggcatgatgaaaaaaa-tgtggagctggatagtagtga-ggttgcacaagaatg-tcagtgtacttca-----------tgtacacttaaaaatggttaaaatgataaatattttg-----------------------------------tatattttaccataat--aag--------------------------------------------------aaTAGGGTATTTTGAAGACAACAACACAACCTCCCACATGTGGCTCTAGCCACTTG---------CACTCCAGATACCCGGCCGCACCC--GTCTCAGGCCCTTGCACGACCTTCCCTCTGTCCCAAGGCTCCT-CTGCAGATACGACAAAGATGAGTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3749103 278 - 3785965 ttccacttgggcatgatgaaaaaaa-tgtggagctggatagtagtga-ggttgcacaagaatg-tcagtgtatttca-----------tgtacacttaaaaatggttaaaatgataaatattttg-----------------------------------tatattttaccataat--aag--------------------------------------------------aaTAGTGTATTTTGAAGACAACAACACAACCTCCCACATGTGGCTCTAGCCACTTG---------CACTCCAGATACCCGGCCGCACCC--GTCTCAGGCCCTTGCACGACCTTCCCTCTGTCCCGAGGCTCCT-CTGCAGATACGACAAAGATGAGTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90338874 278 - 90373283 ttccacttaggcatgatgaaaaaaa-tgtggagctgcatagtagtca-ggttgcacaagaatg-tcagtgtacttca-----------tgtacacttaaaaatggttaaaatgataaatattttg-----------------------------------tatattttaccataat--aag--------------------------------------------------aaTAGTGTATTTTGAAGACAACAACACAACCTCCCACATGTGGCTCTAGCCACTTG---------CACTCCAGATACCCGGACGCACCC--ATCTCAGGCCCTTGCACGACCTTCCCTCTGTCCCGAGGCTCCT-CTGCAGATACGACAAAGATGAGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 139813 278 - 179258 ttctacttgggcatgatgaaaaaaa-agtggagctggatagtagtga-gattgcacaagattg-tcagtgtacttca-----------tgtacacttaaaaatggttaaaatgataaatattttg-----------------------------------tatattttaccataat--aag--------------------------------------------------aaTAGTGTATTTTGAAGACAACAACACAACCTCCCACATGTGGCTCTAGCCACTTG---------CACTCCAGATACCCGGCCGCACCC--GTCTGAGGCCCTTGCACGACCTTCCCTCTGTCCCGAGGCTCCT-CTGCAGATACGACAAAGATGAGTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5609154 280 - 5823884 ttccagttgggcatgatgaaaaaaa-tgtggagctggatagtagtga-ggttgcacaagaatg-tcagtgtacttca-----------tgtacacttaaaaatggttaaaatgataaatattttg-----------------------------------tatattttaccataat--aag--------------------------------------------------aaTAGTGTATTTTGAAGACAACAACACGACCTCCCACATGTGGCTCTAGCCACTTG---------CACTCCAGATACCTGGCTGCACCCCTGTCTTAGGCCCTTGCATGACCTTCCCTCTGTCCCGAGGCTCCT-CTGCAGATACGACAAAGATGAGTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 94771 272 + 372756 ttccagttgggggtgatgagaaaaa-tctggagctagacagtagtga-cgttggacaataatg-caaatgtacttcataccactgaactgtacgcttaagaatggttacaataataaatgttttg-----------------------------------tatattttaccataat--aaa--------------------------------------------------aaC--TGTATTTTGAAGACAACAACACAACCTCCCATGTGTGGCTGTAGCCACTTG---------CTCCTCAGACACCCAGCCGCACCC-CACCTCAAGCTCTTGCATG-----------------AGGCTCCTCCTGCAGAAACGACAAAGATGAGTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16327635 269 + 16356641 ttccagctggggatgatgagaaaaa-tctggagctggatagtagtga-ggtcgcccaataatg-taaatgtacttcgtgccactgaactgtacacttaagaatggttaaaatgagaaatgttttg-----------------------------------tatattttaccataat--aaa--------------------------------------------------aaTAGCGCATTTTGAA------AACACAGCCTCCCACGTGTGGCTCTAGCCACTTG---------CTCCTCAGACACCCGGCCACACCTGTACCTCAGGCCCTTGCATG-----------------AGGCTCTTCCTGCAGACACGACAAAGACGAGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1199101 265 + 1231380 ttccagttggggatgatgagaaaaa-tctggagctggatagtagtga-ggttgcatggtaatg-taaatgtacttcataccactgaactgtgcacttaagaatggtta-------aaatgttttg-----------------------------------tatattttaccataat--aaa--------------------------------------------------aaTAGCGCATTTTGAAGAG---AACACAACCTCCCACATGTGGCTCTAGCCACTTG---------CTCCTTAGACACCCGGCCGCACCCGTGCCTCAGACCCTTGCATG-----------------AGGTTCCTCCTGCAGACACGACAAAGATGAGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2730520 272 + 11732439 ttccagttggggatgatgagaacaa-tctgcagctggatagtagtga-ggttgcagaatgatg-taaatgtacttcatgccactgaactgtacacttaagaatggttaaaatgataaatgtcttg-----------------------------------tatattttaccataat--aaa--------------------------------------------------aaTAGCGTATTTTGAAGAC---AACACAACCTCCCACGTGTGGCTCTAGCCACTTG---------CTCCTCAGACACCCGGCCGCACCCCTGCCTCGGGCCCTCGCATG-----------------AGGCTCCTCCTGCAGACACGACAGAGATGAGTGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22897456 291 + 22939663 tttcattaagggatgatgaaaaaaattctggagatg-atgatggttatggttgcacaatagtg-tgaatgtacttaatgctgtggaactgcatgcttaaaaatggttg---------acgttacg-----------------------------------tatattttcccaacattaaag--------------------------------------------------aaCAGAACTTTTAGAAAAGGGCTATCTGA---ACCAAAAGAAGTTTTAG-TACTTAACATAACCTCCCTCCAGGCGCcctggtgtgcccctaccttaggtatttgcatgctcattcctcaccctggagagtcttcctccagatatGCAAACCGTGAGTAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47646579 352 + 47698779 tttcagttggagatgatgaaaaaat-tcaggagttggatcgtggggacggttgcacaacaatgagaaatgtactaaatgccactgaactgtacacttaaaaatggcgaaaatggtaaattttatgtcttaagaatggttaaaatgctaaattttgttatctatatattaccacaat--aaaaaaaaCCCACATTTTTTTAAAGGGCTACCTTTAAAACCAAAGGAAGCCTTAATACTGTACTTTGACGATAACAGCATAACCTCCTGCCTGTGGCTCCAGCCACAAG----------TGTCCAGGTACC---------------------CCCTGGCAT-----TCCCTGTGCCTGGAGACTCCTCCTCCAGATAGGTCAACCATAAGTGG i canFam3.chr24 I 1286 I 181 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=511943.000000 s hg38.chr20_KI270870v1_alt 161330 55 + 183433 AG-AGATGCAAGGGGATAGGCG-------AGGGGACACTGAAGACATACTCAGAAAGCTCCCC s panTro5.chr20 66496758 55 + 66533130 AG-AGATGCAAGGGGATAGGCG-------AGGGGACACTGAAGACATACTCAGAAAGCTCCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62164218 55 + 62195757 AG-AGATGCAAGGGGATAGGTG-------AGGGGACACTGAAGACATACTCAGAAAGCTCCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 550386 55 - 578057 AG-AGATGCAAGGGGATAGGCG-------AGGGGACACTGAAGACATACTCAGAAAGCTCCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110071789 56 - 110113093 AGTTGATGCAAGAGGATAGGCA-------AGGGGACACCGAAGACATACTCAGAAAGCTTCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92811773 55 - 92844088 AC-AGATGCAAGGGGATAGGCA-------AGGTGACACTGAAGACATACTCAGAAGGCGCCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96477298 55 + 96509753 AC-AGATGCAAGGGGATAGGCA-------AGGTGACACTGAAGACATACTCAGAAGGCGCCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16947368 55 - 16982598 AC-AGATGCAAGGGGATAGGCA-------AGGTGACACTGAAGACATACTCAGAAGGCGCCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3749381 55 - 3785965 AC-AGATGCAAGGGGATAGGCA-------AGGTGACACTGAAGACATACTCAGAAGGCGCCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90339152 55 - 90373283 AC-AGATGCAAGGGGATAGGCA-------AGGGGACACTGAAGACATACTCAGAAGGCGCCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 140091 55 - 179258 AC-AGATGCAAGGGGATAGGCA-------ACGTGACACTGAAGACATACTCAGAAGGCGCCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5609434 54 - 5823884 AC-AGATGCAAGGGGATAGGCA-------AGGGGACACTGAAGACATACTCAGAAGGC-TCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 95043 55 + 372756 AC-AGATGCAAGGGGATGGGCA-------AGGGGATACTGGAGACACATTCAGAAAACTCCCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16327904 43 + 16356641 AC-AGAT------------GCA-------AGGGGATACTGGAGACACGTTCAGAAAGCTCCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1199366 55 + 1231380 AC-AGATGCAAGGGGATGGGCA-------AGAGGACACTGGAGACACATTCAGAAAGCTCCCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2730792 53 + 11732439 AC-AGATGCAAGGGGATGGGCA-------AGGGGACACC--AGACGCATTCAGAAAGCTCCCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22897747 62 + 22939663 AC-AGATGCCAGGGGATAGATATCTGTGCAGGGGATACCCAAGATATATCCAGAAAACTCTCT i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47646931 181 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=2864369.000000 s hg38.chr20_KI270870v1_alt 161385 305 + 183433 GTGGCTGGGTgtgggagaagcctggagg-agggtgacagcagcagttggattcccatccaccttcctgtgcttactactagctggtaagtacaa-------gaagccagcgaacctcttgcagtttcagttccctcatctgtaaaatggaggtatcagtgtcgtcaagccaaaggctgccaggaacctgcctgtaattgaatgagtt-gggattatcactcattgcagcgagagggatgcagatcatggagaactgcaaggcatctcagtaagaggtgtcgggaaaagttactaaaggttatgggcttgagttg s panTro5.chr20 66496813 305 + 66533130 GTGGCTGGGTgtgggagaagcctggagg-agggtgacagcagcagttggattcccatccaccttcctgtgcttactactagctggtaagtacaa-------gaagccagcgaacctcttgcagtttcagttccctcatctgtaaaatggaggtatcagtgtcatcaagccaaaggctgccaggaacctgcctgtaactgaatgagtt-gggattatcactcattgcagcgagaaggatgcagatcatggagaactgcaaggcatctcagtaagaggtgtcgggaaaagttactaaaggttatgggcttgagttg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62164273 305 + 62195757 GTGGCTGGGTgtgggagaagcctggagg-agggtgacagcagcagttggattcccatccaccctcctgtgcttactactagctggtaagtacaa-------gaagccagcgaacctcttgcagtttcagttccctcatctgtaaaatggaggtatcagtgtcgtcaagccaaaggctgccaggaacctgcctgtaattgaatgagtt-gggattatcactcattgcagcgagaaggatgcagatcatggagaactgcaaggcatctcagtaagaggtgtcgggaaaagttactaaaggttatgggcttgagttg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 550441 305 - 578057 GTGGCTGGGTgtgggagaagcctggagg-agggtgacagtagcagttggattcccatctaccttcctgtgcttactactagctggtaagtacaa-------gaagccagctaacctcttgtagtttcagttccctcatctgtaaaatggaggtatcagtgtcgtcaagccaaaggctgccaggaacctgcctgtaattgaatgagtt-gggattatcactcactgcagcaagaaggatgcagatcatggagaactgcaaggcatctcagtaagaggtgttgggaaaagttactaaaggttatgggcttgagttg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110071845 304 - 110113093 GTGGCTGGGTgtgggagaagcct-gaag-agggtgagagtagcagttggattcccatccaccctcctgtgcttactactagctggtaagtacaa-------gaagccagctaacctctggtagtttcagttccctcatctgtaaaatggaggtatcagtgtcatcaagccaaaggctgccaggaacctgcctgtaattgaatgagtt-gggattatcactcattgcagcgagaaggatgcagatcatggagaactgcaaggcatctcagtcagaggtgtcgggaaaacttactaaaggttatgggcttgagttg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92811828 306 - 92844088 gtggctgggtgtgggagaagcctggagg-gggctgagagtagcagttggattcctgtccaccttcctgtgcttactactagctggtaagtacag-------gaagccagctaacctcttgtagtttcagttccctcatctgtaaaatggaggtatcagtgccgtcaagccaaaggccaccaggaacctgcctgtaattgaatgagttggggattatctctcattgctgcgaggaggatgcagatcatggagaactacaaggcatctcagtaagaggtgtcgggaaaacttactaaaggttatgggcttaagttg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96477353 306 + 96509753 gtggctgggtgtgggagaagcctggagg-gggctgagagtagcagttggattcctgtccaccttcctgtgcttactactagctggtaagtacag-------gaagccagctaacctcttgtagtttcagttccctcatctgtaaaatggaggtatcagtgccgtcaagccaaaggccaccaggaacctgcctgtaattgaatgagttggggattatctctcattgctgcgagaaggatgcagatcatggagaactgcaaggcatctcagtaagaggtgtcgggaaaacttactaaaggttatgggcttaagttg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16947423 306 - 16982598 GTGGCTGGGTgtgggagaagcctggagg-gggctgagagtagcagttggattcctgtccaccttcctgtgcttactactagctggtaagtacag-------gacgccagctaacctcttgtagtttcagttccctcatctgtaaaatggaggtatcagtgccgtcaagccaaaggccaccaggaacctgcctgtaattgaatgagttggggattatctctcattgctgcgagaaggatgcagatcatggagaactgcaaggcatctcagtaagaggtgtcgggaaaacttactaaaggttatgggcttaagttg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3749436 285 - 3785965 GTGGCTGGGTgtgggagaagcctggagg-gggctgagagtagcagttggattcctgtccaccttcctgtgcttactactagctggtaagtacag-------gaagccagctaacctcttgtagtttcagttccctcatctgtaaaatggaggtatcagtgccgtcaagccaaaggccaccaggaacctgcctgtcattgaatgagttggggattatctctcattgctgcgagaagg---------------------aaggcatctcagtaagaggtgtcgggaaaacttactcaaggttatgggcttaagttg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90339207 306 - 90373283 gtggctgggtgtgggagaagcctggagg-aggctgagagtagcagttggattcctgtccaccttcctgtgcttactactagctggtaagtacag-------gaagccagctaacctcttgtagtttcagttccctcatctgtaaaatggaggtatcagtgccgtcaagccaaaggccaccaggaacctgcctgtaattgaatgagttggggattatctctcattgcagtgagaaggatgcagatcatggagaactgcaagacatctcagtaagaggtgtcgggaaaacttactaaaggttatgggcttgagacg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 140146 306 - 179258 GTGGCTGGGTgtgggagaagcctggacg-gggctgagagtagcagttggattcctgtccaccttcctgtgcttactactagctggtaagtacag-------gaagccagctaacctcttgtagtttcagttccctcatctgtaaaatggaggtatcagtgccgtcaagccaaaggccaccaggaacctgcctgtaattgaatgagttggggattatctctcattgctgcgagaaggatgcagatcatggagaactgcaaggcatctcagtaagaggtgtcgggaaaacttactaaaggttatgggcttaagttg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5609488 306 - 5823884 GTGGCTGGGTgtgggagaagcctggagg-aggctgtgagtagcagttggattcctgtccaccttcctgtgcttactaccagttggtaagtacag-------gaagcccgctaacctcttgtagtttcagttccctcatctttaaaatggagGtatcagtgccgtcaagccaaagggcaccaggaacctgcctgtaattgaatgagttggggattatctctcattgcagtgagaaggatgcagatcatggagaactgcaaggcatctcagtaagaggtgtcgggaaaacttactaaacgttatgggcttgagttg i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16327947 305 + 16356641 GTGGCTGGGTgtgggaagagcctggagg-agggtgagagtagcagttggagtctcatccaccttcctgtgcttactcctggctggtaagtacag-------gaagccagctaacctcttgtagtttcagttccctcatctgtaaaatggagGtatcaatgccgtcaagccgaaggccacaaggaacatgcctgtaattgaatgtgtt-gggactgtcactcgtcgcagcgaggagggtgcggatcatggagaactgcaaggcatctcagtaagaggtgtcggggaaacttactgaaaaacgtgggcttgagttg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1199421 305 + 1231380 GTGGCTGGGTgtgggaggagcctggagg-agggtgagggcagcagttggattctcatccaccttcctgtacttactcctagctggtaagtacag-------gaagccagctgacctcttgtagtttcagttccctcatccgtaaaatggagGtatccatgccgtcaagccgaaggccacaaggaacatgcctgtaattgaacgcgtt-gggaccatcactcgttgcagtgaggagggcgcagatcatggagaactgccgggcatctcagtaagaggtgtcgggaaaaattactgaaaaacatgggcttgagttg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2730845 305 + 11732439 GTGGCTGGGTgtgggaggagcctggagg-agggcgagagtagctgctggattctcatccaccttcctgtactcactactagctggtaggtacag-------gaagccagctaacctcttgtactttcagttccctcatctgtaaaatggagGtatcaatgccgtcaagccgaaggccacaaggaacatgcctgtaattgaatgtgtt-gggattgtcacttgttgcagcgaggaggatgcagatcatggagaaatgcaaggcatctcagtaagaggtgtcgggaaaacttactaaaacatatgcgtttgagttg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22897809 300 + 22939663 gtggctgggctggggaggaggctggaagaaggttaggagcagcggttggattctagcctatcttcctgtacttactacaagct-----atgcagctttggtggagccagctaacctttcagagcctcagtttcctcatctgtaaaatgaaggtgtcaatgtcctccagccaaaggccaccaagaacacacttgcaggtgaataagtt-ggtattattgttcattgcagtgagggtga--------atggggaactgtagggcaattcggtaagaggtattgaaaaaacttactaaaggatgtcggcttgggttg i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47646931 181 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e calJac3.chrUn_GL286459 95098 0 + 372756 C a score=662106.000000 s hg38.chr20_KI270870v1_alt 161690 80 + 183433 ggtga-t---ttttttcatggattagatgctgtcaggaattgggg----gagtggatggg--gggaaagggtggttctctgggcatctca s panTro5.chr20 66497118 80 + 66533130 ggtga-t---ttttttcatggattagatgctgtcaggaattgggg----gagtggatggg--gggaaagggtggttctctgggcatctca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62164578 79 + 62195757 ggtga-----ttttttcatggattagatgctgtcaggaattgggg----gagtggatggg--gggaaagggtggttctctgggcatctca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 550746 80 - 578057 ggtga-t---ttttttcatggattagatgctgtcaggaattgggg----gagtggatggg--gggaaagggtggttctctgggcatctca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110072149 81 - 110113093 ggtgatt---tttttttatggattagatgctgtcaggaattgggg----gagtggatcag--gggaaagggtggttctctgggtatctta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92812134 80 - 92844088 ggtga-t---ttttttcatggatcagatgctgtcaggaattgggg----gagtggatggg--gggaaagggcggttctctgggcacctca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96477659 80 + 96509753 ggtga-t---ttttttcatggatcagatgctgtcaggaattgggg----gagtggatggg--gggaaagggcggttctctgggcacctca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16947729 80 - 16982598 ggtga-t---ttttttcatggatcagatgctgtcaggaattgggg----gagtggatggg--gggaaagggcggttctctgggcacctca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3749721 80 - 3785965 ggtga-t---ttttttcatggatcagatgctgtcaggaattgggg----gagtggatggg--gggaaagggcggttctctgggcacctca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90339513 80 - 90373283 ggtga-t---ttttttcatggatcagatgctgtcaggaattgggg----gagtggatggg--gggaaagggcggttctctgggcacctca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 140452 80 - 179258 ggtga-t---ttttttcatggatcagatgctgtcaggaattgggg----gagtggatggg--gggaaagggcggttctctgggcacctca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5609794 80 - 5823884 ggtga-t---ttttttcatggattagatgttgtcaggaatcaggg----gagtggatggg--ttgaaagggcggttctctgggcatctca i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16328252 84 + 16356641 tgtga-t---tttttttgtgcattagatgcactcaggaattgtggctgtgtgtgtgtgtg--gggggggagcagttctctgggcatctag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1199726 76 + 1231380 tgtga-t---ttttttcgtggattagatgccctcaggaattgtgg--------gggtggg--gggaaagagcagttctctgggcttctag i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2731150 78 + 11732439 tgtga-t---ttttttcatggattagatgccctcaggaatggtgg--------gggtgaggaggggaagagcggttctctgggcatctag i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22898109 65 + 22939663 ggtga-tttattttttcacagatcagatgtcatcaggaattagag------------------------ggtagttctctgggcatgtca i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47647112 49 + 47698779 GGGGA-A---ACTCTGAGTGGATTGGATGCTGCCAGGAAGCTAAG-------------------------------------GCCTCTCA i canFam3.chr24 I 181 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e calJac3.chrUn_GL286459 95098 0 + 372756 C a score=4287553.000000 s hg38.chr20_KI270870v1_alt 161770 382 + 183433 gtagatgttatctgtgaggaggccagggcagagggaggctcagctgtagctggtagaggagcgggggtcattgttactaacttggagatgatatgtcttagattttgtgggtggcacagttaccc-tgtttttgtttgtgcttagacaaaattatgacgtgg-------------ccttggatca-------tgatggtgctc--ctctacaaaattattt---------------------atgtccaacaggag-accccatggcctcgatctgagtgccaggccagctcctgatgtcacggtccacttttct---tcttggaggtcatactagtacctatttcatggaaataacccatgtagagtgctcagtat-a-TACCCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGAAGCTGATGTGGAGGG s panTro5.chr20 66497198 382 + 66533130 gtagatgttatctgtgaggaggccagggcagagggaggctcagctgtagctggtagaggagcgggggtcattgttactaacttggagatgatatgtcttagattttgtgggtggcacagttaccc-tatttttgtttgtgcttagacaaaattatgacgtgg-------------ccttggatca-------tgatggtgctc--ctctacaaaattattt---------------------atgtccaacaggag-accccatggcctcgatctgagtgccaggccagctcctgatgtcacggtccacttttct---tcttggaggtcatactagtacctatttcatggaaataacccatgtagagtgctcagtat-a-TACCCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGAAGCTGATGTGGAGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62164657 382 + 62195757 gtagatgttatctgtgaggaggccagggcagaggaaggctcagctgtagctggtagaggagcgggggtcattgttactaacttggagatgatatgtcttagattttgtgggtggcacagttaccc-tatttttgtttgtgcttagacaaaattatgacctgg-------------ccttggatca-------tgatggtgctc--ctctacaaaattattt---------------------atgtccaacaggag-acctcatggcctcgatctgagtgccaggccagctcctgatgtcacggtccacttttct---tcttggaggtcatactagtacctatttcatggaaataacccatgtagagtgctcagtat-a-TACCCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGAAGCTGATGTGGAGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 550826 382 - 578057 gtagatgttaactgtgaggaggccagggcagagggaggctcagctgtagctggtagaggagcgggggtcattgttactaacttggagatgatatatcttagattttgtgggtggcacagtgaccc-tatttttgtttgtgcttagacaaaattatgacgtgg-------------ccttggatca-------tgatggtgctc--ctctacaaatttattt---------------------atgtccaaaaggag-accccatggcctcgatctgagtgccaggccagctcctgatgtcacggtccacttttct---tcttggaggtcatactagtacctatttcatggaaataacccatgtagagtgctcagtat-a-TACCCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGAAGCTGATGTGGAGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110072230 382 - 110113093 gtggatgttatctgtgaggaggccagggcagagggagactcaggtgtagctggtagaggagtgggggacattgctactaacttggagatgatatgtcttagattttgtgggtggcacagagaccc-tatttttgtttgtgcttagacaaaattatgacgtgg-------------ctttggatca-------tgatggtgctc--ctctacaaaattattt---------------------atgtccaacaggag-accccgtggcctcgatctgagccccaggccagctcctgatgtcacggtccacttttct---tcttggaggtcatactagtacctattccatggaaataactcatgtagagtgctcagtat-a-TACCCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGGAGCTGATGTGGAGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92812214 382 - 92844088 gtagatgttatctgtgagaaggccagggcagagggaggctcagctgtagctggtagaggagcagcggtcattgctactaacttggggaggatatgtcttagattttgtgggtgacacagtgaccc-tatttttgtttgtgcttagacaaaattatgatgtgg-------------ccttggatca-------tgatggtgctt--ctctacaaaagtattt---------------------atgtccaataggag-accccatggcctccatctgagcgccaggccagttcctgatgtcatggtccacttttct---tcttggaggtcatactagtatctatttcttggaaataacctatgtagagtgcttagtat-g-taccCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGGAGCTGATATGGAGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96477739 382 + 96509753 gtagatgttatctgtgagaaggccagggcagagggaggctcagctgtagctggtagaggagcagcggtcattgctactaacttggggaggatatgtcttagattttgtgggtgacacagtgaccc-tatttttgtttgtgcttagacaaaattatgatgtgg-------------ccttggatca-------tgatggtgctt--ctctacaaaagtattt---------------------atgtccaataggag-accccatggcctccatctgagcgccaggccagttcctgatgtcatggtccacttttct---tcttggaggtcatactagtatctatttcttggaaataacctatgtagagtgcttagtat-g-taccCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGGAGCTGATATGGAGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16947809 382 - 16982598 gtagatgttatctgtgagaaggccagggcagagggaggctcagctgtagctggtagaggagcaggggtcattgctactaacttggggaggatatgtcttagattttgtgggtgacacagtgaccc-tatttttgtttgtgcttagacaaaattatgatgtgg-------------ccttggatca-------tgatggtgctt--ctctacaaaagtattt---------------------atgtccaataggag-accccatggcctccatctgagcgccaggccagttcctgatgtcatggtccacttttct---tcttggaggtcatactagtacctatttcttggaaataacctatgtagagtgcttagtat-g-taccCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGGAGCTGATATGGAGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3749801 382 - 3785965 gtagatgttatctgtgagaaggccagggcagagggaggctcagctgtagctggtagaggagcaggggtcattgctactaacttggggaggatatgtcttagattttgtgggtgacacagtgaccc-tatttttgtttgtgcttagacaaaattatgatgtgg-------------ccttggatca-------tgatggtgctt--ctctacaaaagtattt---------------------atgtccaataggag-accccatggcctccatctgagcgccaggccagttcctgatgtcatggtccacttttct---tcttgaaggtcatactagtacctatttcttggaaataacctatgtagagtgcttagtat-g-taccCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGGAGCTGATATGGAGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90339593 382 - 90373283 gtagatgttatctgtgagaaggccagggcggagggaggctcagctgtagctggtagaggagcaggggtcattgctactaacttggagaggatatgtcttagattttgtgggtgacacagtgaccc-tatttttgtttgtgcttagacaaaattatgatgtgg-------------ccttggatca-------tgatggtgctt--ctctacaaaagtattt---------------------atgtccaataggag-accccatggcctccatctgagcgccaggccagttcctgatgtcatggtccacttttct---tcttggaggtcatactagtacctatttcTTGGAAATAACCTAGGTAGAGTGCTTAGTAT-G-TACCCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGGAGCTGATATGGAGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 140532 382 - 179258 gtagatgttatctgtgagaaggccagggcagagggaggctcagctgtagctggtagaggagcaggggtcactgctactaacttggggaggatatgtcttagattttgtgggtgacacagtgaccc-tatttttgtttgtgcttagacaaaattatgatgtgg-------------ccttggatca-------tgatggtgctt--ctctacaaaagtattt---------------------atgtccaataggag-accccatggcctgcatctgagcgccaggccagttcctgatgtcatggtccacttttct---tcttggaggtcatactagtacctatttcttggaaataacctacgtagagtgcttagtat-g-taccCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGGAGCTGATATGGAGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5609874 382 - 5823884 gtagatgttttctgtgagaaggccagggcagagggaggctcagctgtagctggtagaggagcaggggtcatcgctactaacttggagaggttatgtcttagagtttgtgggtgacacagtgaccc-tatttttgtttgtgcttagacaaaattatgatgtgg-------------ccttggatca-------tgatggtgctt--ctctacaaaagtgttt---------------------atgtccaataggag-accccatggcctccatctgagcgccaggccagttcctgatgtcatggtctacttttct---tcttGGAGGTCATACTAGTACCTATTTCTTGGAAATAACTTATGTAGAGTGCTTAGTAT-G-TACCCTGTGAAGGGT------TATGAATGCTGATGG--------TAGTGGGAGCTGATATGGAGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 95098 382 + 372756 Gtagatgttatctgtgaggaggccagggcagagggaggctcagctgtagctggtagaggagctggagtcattgctactaactgggagaggata---catagattttgtgggtggcacagtgaccc-aa---ttatttgtgcttagacaaaattatgacatgg-------------ccttggatca-------tgatggtgctc--ctccacaagattactt---------------------atgtccaataggag-accacgtggccttgatctgagcgccaggccagttcctgatgtcacggtccacttttct---ccttGGAAGTCATGTTAGTACCTATTTCATGGAAATAAGCTATGTAGAGTGCTCAGTAT-G-TACCTTATGAAGGGTTAATGCTATGAATGCTGATAG--------CAGTGGGAGCTGATATGGAGGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16328336 377 + 16356641 gtagatgttacctgtgaggaggccagggcagagggag-----------gctggtagaggagccggggccattgctactaactgggagaggatctgtcttagattttgtgggtggcacagtgaccc-tatttttgtttgtgcttagacaaaattatgacatgg-------------ccttggatca-------tgatggtgctc--ctccacaagattattt---------------------atgtccaacaggag-accgtgtggccttgatctgagcaccaggccagttcctgatgtcgcagtccacttttct---ccttGGAAGTCATACTAGTACCTATTTCGTGGAAATAAGCTATGTAGAGTGCTCAGTAT-G-TACCTTATGAAGGGTTAATGCTATGAATGCTGATAG--------TAGTGGGAGCTGATATGGAAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1199802 388 + 1231380 gtagatgttatctgggaggaggccagggcagagggaggctcagctgtagccggtagaggagctggggtcattgctactaactgggaaaggatatgtcttagattttgtgggtggtacagtgaccc-tatttttgtttgtgcttagacaaaattatgacatgg-------------ccttgggtca-------tgatggtgctc--ctccatgagattattt---------------------atgtccaataggag-gccgcgtggccttgatgtgagcgccaggccagttcctgatgtcacggtccacttttct---cctCGGAAGTCATAGTAGTACCTATTTCATGGAAATAACCTATGTAGAGTGCTCAGTAT-G-TACCTTATGAAGGGTTAATGCTATGAATGCTGATAG--------TAGTGGGAGCTGATATGGAGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2731228 386 + 11732439 gtagatgttatctgtgaggaggccagggcagagggaggctcagctgtagctggtagaggagctggggtcatcgctactaactgggagaggatg--tcttagattttgtgggtggcacagtgaccc-tatttttgtttgtgcttagacagaattatgacatgg-------------ccttggatca-------tgacggtgctc--ctccacaagattgttt---------------------atgtcccataggag-accgcgtggccttgatctgagcgccaggccatttcctgatgtcaccgtccacttttct---ccttGGAAGTCATACTAGTACCTATTTCATGGAAATAAGCTACGTAGAGTGTTCAGTAT-G-TACCTTATGACAGGTTCATGCTATGAATGCTGATAG--------TAGTGGGAGCTGATATGGAGCG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22898174 401 + 22939663 gtaaatgctataggtgaggaggccagagcagaggagggctcagctgtggctgatgacagagcagaggtctttgctactagtcaagaaagggcaagtctgggacatcatgggaggcacagtgatctgtttttttgtctgggcttatacaaaattatgacacggccatattttgtctccttgtatca-------tgatggtgctcctctctacaagattgttttgtgaccaacaagatttgacagtgaccaataggagaaccccatagcctcgttgtgagcaccaaactggcttctgcggtcagggtctgcttttct----cttGGAGGTAGTAACA--------------GAAATAGGCTGAGTAGGAC-CTTAGCATGG-TATCCTATGAA----------GACGAATGCTCAGGG--------TGGTGGGAGCTGATTTGCAGGG i otoGar3.GL873542 C 0 I 21 s canFam3.chr24 47647161 393 + 47698779 ATAAGCCATAACCTCTAAGAGGGTAGGGCAGAAGGAGGCGCATCTATAACTGATGAAGGAGCAGGGGTTGCTGCTATTGACTGGGAGAGAGCACGTTTGAGATTCTGTGCGTGACTCAGGGACCT-CATTTTGGTCTGTGCTTGGGCATATTTAGGACA----------------CTTTGTCTCACTGTACCCAATGGAGTGC--Ctctgcaagattgctt---------------------atgtccaacggaat-ac---atggccttgtggtgagcggcaggccagctcccaatgtcagaggcagctcttctcattctcaGAGATCACGTTGGTATCTACTTCATGGAAATAACCCATGTAAAGAACTTAGTGT-GACACTCTACAAA-GAT------TAATAATGATGGTGGAACATGGATGGTGGAA-CTGATGTGGAGGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=262293.000000 s hg38.chr20_KI270870v1_alt 162152 29 + 183433 GAATGGTGGA--GACACCTTGGAAAACCAAG s panTro5.chr20 66497580 29 + 66533130 GAACGGTGGA--GACACCTTGGAAAACCAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62165039 29 + 62195757 GAACGGTGGA--GACACCTTGGAAAACCAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 551208 29 - 578057 GAATGGTGGA--GACACCTTGGAAAACCAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110072612 29 - 110113093 GAATGGTGGA--GACACCTTGGAAAACTGAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92812596 29 - 92844088 GAATGCAGGA--GACACCTTGGAAAACCAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96478121 29 + 96509753 GAATGCAGGA--GACACCTTGGAAAACCAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16948191 29 - 16982598 GAATGCAGGA--GACACCTTGGAAAACCAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3750183 29 - 3785965 GAATGCAGGA--GACACCTTGGAAAACCAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90339975 29 - 90373283 GAATGGAGGA--GACACCTTGGAAAACCAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 140914 29 - 179258 GAATGCAGGA--GACACCTTGGAAAACCAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5610256 29 - 5823884 GAATGGAAGA--GACACCTTGGAAAACCAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 95480 27 + 372756 GAATGGAGGA--AACACCTTGGAAAGCCA-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16328713 29 + 16356641 GAATGGAGGA--CACACCTTGGAAAACCAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1200190 29 + 1231380 GAATGGAGGA--CACACCTTGGAAAACCAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2731614 19 + 11732439 GAATGGAGGA--AACACCTCG---------- i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47647554 30 + 47698779 -GGTGGGGGAAGGAACCCTGGGAGAGCCAAG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e otoGar3.GL873542 22898575 21 + 22939663 I a score=6316039.000000 s hg38.chr20_KI270870v1_alt 162181 656 + 183433 CAAGAGTCTGAAGTtgtggcaggccgggtctcactaacgcaggcctc---cattaca--gctgtcccagcacggactgagtagccaggttaaacattaaaagctgattgagccaatgcccttatacaaaggttggaatgtaacaaagagcccaccaagagttttgcctaggctcttcctgggccttgaagcatgacaagataacgaaggaactcttaacaggaccctttttaggattaaacaagttgtattagggatctgaagaaactccccaggcctccacaaacaagtttatgggggtctaaaggaattccccatatcattatgatttagcaggagacaagataagggtaatcaccccagcacctagacccatttagattaagtaaacttactgaggctccagaagagggtcttcaggac-tcaaccttagtcatagattaaaagaagttaatcacttatgtct----gtagatgaatgcacacttacatgtagacatacagcttagaag---gtatacgagctttggaaaactttgtaattttgagttggtatggtgataatttccaggccttctccttgtaaccggttacagaaataaaacctctcttactctccagctcatttgcatct--tgttattgggccaggagaagtagtagcccgaccct s panTro5.chr20 66497609 657 + 66533130 CAAGAGTCTGAAGTtgtgacaggccgggtctcactaacgcaggcctc---cattaca--gctgtcccagcacggactgagtagccaggttaaacattaaaagctgattgagccaatgcccttatacaaaggttggaatgtaacaaagatcccaccaggagttttgcctaggctcttcctgggccttgaagcatgacaaggtaacgaaggaactcttaacaggaccctttttaggattaaacaagttgtattagggatctgaagaaactccccaggcctccacaaacaagtttatgggggtctaaaggaattccccatatcattatgatttagcaggagacaagataagggtaatcaccccagcacctagacccatttagattaagtaaacttactgaggctccagaagagggtcttcaggacttcaaccttagtcatagattaaaagaagttaatcacttatgtct----gtagatgaatgcacacttacatgtagacacatagcttagaag---gtatacgagctttggaaaactttgtaattttgagttggtgtggtgataatttccaggccttctccttgtaaccggttacagaaataaaacctctcttactctccagctcatttgcatct--tgttattgggccaggagaagtagtagcccgaccct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62165068 657 + 62195757 CAAGAGTCTGAAGTtgtggcaggccgggtctcactaacgcaggcctc---cattaca--gctgtcccagcacggactgagtagccaggttaaacattaaaagctgattgagccaatgcccttatacaaaggttggaatgtaacaaagagcccaccaagagttttgcctaggctcttcctgggccttgaagcatgacaagataacgaaggaactcttaacaggaccctttttaggattaaacaagttgtattagggatctgaagaaactccccaggcctccacaaacaagtttatgggggtctaaaggaattcctcatatcattatgatttagcaggagacaagataagggtaatcaccccagcacctagacccatttagattaagtaaacttactgaggctccagaagagggtcttcaggacttcaaccttagtcatagattaaaagaagttaatcacttatgtct----gtagatgaatgcacacttacatgtagacatatagcttagaag---gtatacgagctttggaaaactttgtaattttgagttggtgtggtgataatttccaggccttctccttgtaaccggttacagaaataaaacccctcttactctccagctcatttgcatat--tgttattgggccaggagaagtagtagcccgaccct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 551237 656 - 578057 CAAGAGTCTGAAGTtgtggcaggccgggtctcactaacgcaggcctc---cattaca--gctgtcccagcacggactgagtagccaggttaaacattaaaaactgattgagccaatgcccttatacaaaggttggaatgtaacaaagagcccaccaagagttttgcctaggctcttcctgggccttgaagcatgacaagataacgaaggaactcttaacaggaccctttttaggattaaacaagttgtattagggatctgaagaaactccccaggcctccacaaacaaatttat-ggggtctaaaagaattccccatatcattatgatttagcaggagacaagataagggtaatcaccccagcacctaaacccatttagatcaaggaaacttactgaggctccagaagagggtcttcaggacttcgaccttagtcatagattaaaagaagttaatcacttatgtct----gtagatgaatgcacacttacacgtagacatatagcttagaag---gtatacgagctttggaaaactttgtaattttgagttggtctggtgataacttccaggccttctccttgtaaccggttacagaaataaaacctctcttactctccagctcatttgcatct--tgttattgggccaggagaagtagtagcccgaccct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110072641 647 - 110113093 CAAGAGTCTGAAGTtgtggcaggccgggtctcactaacgcaggtctccatcattaca--actgtcccagcacggact---------ggttaaacattaaaagctgattgagccaatgcccttatacaaagcttggaatgtaacaaagagcccaccaagagttttgcctaggcttttcctgggccttgaagcatgacaagataacgaaggaactcttaacaggaccctttttaggattaaacaagttgtattagggatccgaagaaactccccaggcctccacaaacaagtgtatgggggtctaaaggaattccccataccattaggatttagcaggagacaagatgagggtaatcaccccagcacctagacccatttagatt----aaacttactgaggctccagaagaaggtcttcaggacttcgaccttggtcatagattaaaagaagttaatcacttgtgtct----ttagatgaatgcacacttacacgtaggcatatagcttagaag---gtatacaagctttggaaaactttgtaattttgagttggtctggtgataatttccaggccttctccttgtaaccggttacagaaataaaacctctcttactctccagctcatttgcatct--tgttattgggccaggagaagtagtagccccaccct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92812625 654 - 92844088 CAAGAGTCTGAAGTtgtggcaggccaggtttcactaacacaggcgtc---cattaca--actgtcccagcacggactgagtagccaggttaaacattaaaagctgattgagccaatgcccttatacaaaggttggaatgtaacaaagagcccaccaagatttttgcctaggcttttcctgggccttgaagcatgacaagataatgaaggaactcttaacaggaccc-ttttaggattaaacaaattgtattagggatctgaagaaactccccaggcctccacaaataagtgtatgggggtctaaaggaactgcccataccattatgatttagcaggagatgagataagggtaatcaccccagcacctggacccatttagattaagtaaacttactgaggctccaggagagggtcttcaggacttagatcttagttatagattagaagaagttaatctc-tatgtct----ttagatgaatgcacacgtacacgtagacatacagcttagaag---gtatacaagcttcagaaaactttgtaattttgagttggtctggtgataatttccaggccttctccttgtaaccggttacagaaataaaacctcccttactccccagcttacctgcatct--tgttattgggccaggagaagtagc-gcccgaccct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96478150 654 + 96509753 CAAGAGTCTGAAGTtgtggcaggccaggtttcactaacacaggcgtc---cattaca--actgtcccagcacggactgagtagccaggttaaacattaaaagctgattgagccaatgcccttatacaaaggttggaatgtaacaaagagcccaccaagatttttgcctaggcttttcctgggccttgaagcatgacaagataatgaaggaactcttaacaggaccc-ttttaggattaaacaaattgtattagggatctgaagaaactccccaggcctccacaaataagtgtatgggggtctaaaggaactgcccataccattatgatttagcaggagatgagataagggtaatcaccccagcacctggacccatttagattaagtaaacttactgaggctccaggagagggtcttcaggacttagatcttagttatagattagaagaagttaatctc-tatgtct----ttagatgaatgcacacgtacacgtagacatacagcttagaag---gtatacaagcttcagaaaactttgtaattttgagttggtctggtgataatttccaggccttctccttgtaaccggttacagaaataaaacctcccttactccccagcttacctgcatct--tgttattgggccaggagaagtagc-gcccgaccct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16948220 654 - 16982598 CAAGAGTCTGAAGTtgtggcaggccaggtttcactaacacaggcgtc---cattaca--actgtcccagcacggactgagtagccaggttaaacattaaaagctgattgagccaatgcccttatacaaaggttggaatgtaacaaagagcccaccaagatttttgcctaggcttttcctgggccttgaagcatgacaagataatgaaggaactcttaacaggaccc-ttttaggattaaacaaattgtattagggatctgaagaaactccccaggcctccacaaataagtgtatgggggtctaaaggaactgcccataccattatgatttagcaggagatgagataagggtaatcaccccagcacctggacccatttagattaagtaaacttactgaggctccaggagagggtcttcaggacttagatcttagttatagattagaagaagttaatctc-tatgtct----ttagatgaatgcacacgtacacgtagacatacagcttagaag---gtatacaagcttcagaaaactttgtaattttgagttggtctggtgataatttccaggccttctccttgtaaccggttacagaaataaaacctcccttactccccagcttacctgcatct--tgttattgggccaggagaagtagc-gcccgaccct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3750212 653 - 3785965 CAAGAGTCTGAAGTtgtggcaggccaggtttcactaacacaggcgtc---cattaca--actgtcccaccacggactgagtagccaggttaaacattaaaagctgattgagccaatgcccttatacaaaggtcggaatgtaacaaagagcccaccaagatttttgcctaggcttttcctgcgccttgaagcatgacaagataatgaaggaactcttaacaggaccc-ttttaggattaaacaaattgtattagggatctgaagaaactccccaggcctccacaaataagtgtatgggggtctaaaggaactgcccataccgttatgatttagcaggagataagataagggtaatcgccccagcacctggacccatttagattaagtaaacttactgaggctccaggagagggtc-tcaggacttagatcttagttatagattagaagaaggtaatcac-taggtct----ttagatgaatgcacacgtacacgtagacatacagcttagaag---gtatacaagcttcagaaaactttgtaattttgagttggtctggtgataatttccaggccttctccttgtagccggttacagaaataaaacctcgcttactccccagcttacctgcatct--tgttgttgggccaggagaagtagc-gcccgaccct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90340004 655 - 90373283 CAAGAGTCTGAAGTtgtggcaggccaggtttcactaacacaggcgtc---cattaca--actgtcccagcacggactgagtagccaggttaaacattaaaagctgattgagccaatgcccttatacaaaggttggaatgtaacaaagagcccaccaagatttttgcctaggcttttcctgggccttgaagcatgacaagataatgaaggaactcttaacaggaccc-ttttaggattaaacaaattgtattagggatctgaagaaactccccaggcctccacaaataagtgtatgggggtctaaaggaactgcccataccattatgatttagcaggagataagataagggtaatcaccccagcacctggacccatttagattaagtaaacttactgaggctctaggagagggtcttcaggacttagatcttagttatagattagaagaagttaatcac-tatgtct----ttagacgaatgcacacgtacacgtagacatacagcttagaag---gtatacaagcttcagaaaactttgtaattttgagttggtctggagataatttccaggccttctccttgtaaccggttacagaaataaaacctcccttactccccagctcacctgcatct--tgttattgggccaggagaagtagcagcccgaccct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 140943 653 - 179258 CAAGAGTCTGAAGTtgtggcaggccaggtttcactaacacaggcgtc---cattaca--actgtcccagcacggaccgagtagccaggttaaacattaaaagctgatggagccaatgcccttatacaaaggttggaatgtaacaaagagcccaccaagatttttgcctaggcttttcctgggccttgaagcatgacaggataatgaaggaactcttaacaggaccc-ttttaggattaaacaaattgtattagggatctgaagaaactccccaggcctccacaaataagtgtatgggggtctaaaggaactgcccataccattatgatttagcaggagataagataagggtaatcgccccagcacctggacccatttagattaagtaaacttactgaggctccaggagagggtc-tcaggacttagatcttagttatagattagaagaagttaatcac-taggtct----ttagatgaacgcacacgtacacgtagacatacagcttagaag---gtatacaagcttcagaaaactttgtaattttgagttggtctggtgataatttccaggccttctccttgtaaccggttacagaaataaaccctcccttactccccagcttacctgcatct--tgttgttcagccaggagaagtagc-gcccgaccct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5610285 655 - 5823884 CAAGAGTCTGAAGTtgtggcaggccaggtttcactaacacaggcgtc---cattaca--actgttccagaatggactgagtagccaggttaaacattaaaagctgattgagccaatgcccttatacaaaggttggaatgtaacaaagagcccaccaagatttttgcctaggcttttcctgggccttgaagcatgacaagataatgaaggaactcttaacaggaccc-ttttaggattaaacaaattgtactagggatctgaagaaactccccaggcctccacaaataagtatatgggggtctaaaggaactgcccataccattatgatgtagcaggagataagataagggtaatcaccctggctcctggacccatttagattaagtaaacttactgaggctccaggagagggtcttgaggacttagatcttagttatagattagaagaagttaatcac-tatgtct----ttagatgaatgcacatgtacacgtagacatacagcttagaag---gtatacaagcttcagaaaactttgtaatttttagttggtctggtgataatttccaggccttctccttgtaaccggttacagaaataaaacctcccttactccccagctcacctgcatct--tgttattgggccaggagaagtagcagcccgaccct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 95507 659 + 372756 CACGAGTCTGAAGGtgtggcacgccaggtctcgctgactcaggcctc---cattatg-----attccagcatggactgagtagccaggtttcacatccaaagctgatcgagccactgcctttatacaaaggttggaatgtaacgaagagcccaccaagagttctgccttggcttttcctgggccgtgaagcatgacaagataatgaatgaattcttaacaggaccctttttagtattaaacaaattttact-ggggtctgaagaaattccccaagcctccataaacgagtttattggggtctaaaggaactccccataccataatgatttagcaggagacaagataagggcaatcaccccagcgcctagacccacttatattaagtaaatttactgaggctccagaagagggtcttcaggacttagaccttagttacagattaaaagaagttaatcacttacgtctttagttagctgaacgcacacttacatgtagacatatagcttagaag---gtgtataagctctggaaaactttgtaattttgagttggtccggtgataatttccaggccttctccctgtaaccagttgcagaaataaaacctctcttactccccagttctttggcatcttgtgttattgggccacaagaaacagcagcccgaccct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16328742 652 + 16356641 CAAGAGTCTGAAGGtgtggcaggccaggtctcgctaacttaggcctc---cactaca--actattccagaatggactgagtagccaggttacacattcaaagctgatcgagccactgcctttatataaaggttggaatgtaacaaagagc---ccaagaattctgccttggctttttctgggccttgaagcatgacaagataatgaacaaattcttaacaggaccctttttagtattaaacaaattttatt-ggggtctgaagaaactccccatgcctccacaaacaagtttattggggcctaaaggaactccccataccattatgatttagcaggagacaagataagggtaatcaccccagcacctagacccatgtatattaagtaaacttactgaggctccagaagagggtcttcaggacttagaccttagttacagattaaaagaagttaatcacttatgtct----ttagctgaatgcacacttacacgtagacatacagcttagaag---gtgtataagctctggaaaacttcgtaattttgagttggac---tgctaatttccaggccttctccctgtaacccgttgcagaaataaaacctctctcactccccagttcattggcatcttgtgttattgggccacgagaaacagcagcccgaccct i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1200219 656 + 1231380 CAAGAGTCTGAAGGtgtggcaggccaggtctcgctaactcaggcctc---cattaca--actattccagaatggactgagtagccaggttacacatgcaaagctgacggagccactgcctttacataaaggttggaatgtaacaaagagcccaccaagagttctgccttggcttttcctgggccttgaagcatgacaagataatgaacaaattcttaacaggaccctttttagtattaaacaagttttatt-ggggtctgaagaaaatccccacgcctccacaatcaagtttattggggtctaaaggaactccccataccattatgttttagcaggagacaagataagggtaatcaccccagcacctagacccatttatattaagtaaacttactgaggctccagaagagggtcttcaggacttagatcttagttacagactaaaagaagttaatcacgtatgtct----ttagctgaacgcacagttacacgtagacatacagcttagaag---gtgtataagctctggaaaaccttgtaattttcagttggtctagtgatcatttccaggccttctccctgtaagcggctgcggaaataaaac--ctcttactccccagttcattggcatcttgtgttattgggccacgagaaacagcagcctgaccct i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2731633 660 + 11732439 ---GAGTCTGAAGGtgtggcaggccagggcttgctaactcaggcctc---cgttacaacactattccagcatggactgagtagccaggttacacattcaaagctgatcgagccactgcctttatacaaaggttggaatgtaacagagagcccaccaagagttctgtcttggcttttcctgggccttgaagcatgacaagataatgaacgaattcttaacaggacctttttaagtattaaacaaattttatt-ggggtctgaagaaactccccacacctccacaaacaagtttattggggtctaaaggaactccccataccattatgatttagcaggagacaagataagggtaatcaccccagcacctagacccgtttatattaagtaaacttactgaggctccagaagagggtcttcaggacctagaccttagttacagattaaaagaagttaatcacttatgtct----ttagctgaacgcacactcacacgtagacacatagcttagaagtctgtgtataagctctggaaaactttgtaattttgagttggtctggtgataatttccaggccttctccctgtaaccggttgcagaaataaaacctctcttcctccccagttcattggcatcttgtgttatcgggccacgagaaacggcagcccgaccct i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47647584 0 + 47698779 C e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e otoGar3.GL873542 22898575 21 + 22939663 I a score=442850.000000 s hg38.chr20_KI270870v1_alt 162837 47 + 183433 cagttgggtccaggaacaAAGGGAGTGTCTGAAGACAGCAGTGATGT s panTro5.chr20 66498266 47 + 66533130 cagttgggtccaggaacaAAGGGAGTGTCTGAAGACAGCAGTGATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62165725 47 + 62195757 cagttgggtccaggaacaAAGGGAGTCTCTGAAGACAGCAGTGATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 551893 47 - 578057 cagttgggtccaggaacaAAGGGAGTGTCTGAAGACAGCAGTGATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110073288 47 - 110113093 cagttgggtccaggaacaAAGGGAGTGTCTGAAGACAGCAGTGATGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92813279 47 - 92844088 cagttggttccaggaacaAAGGGAGTGTCTGAAGACAGCAGTGATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96478804 47 + 96509753 cagttggttccaggaacaaagggagtgtctgaagacagcagtgatgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16948874 47 - 16982598 cagttggttccaggaacaAAGGGAGTGTCTGAAGACAGCAGTGATGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3750865 46 - 3785965 cagctggttccaggaataAA-GGAGTGTCTGAAGACAGCAGTGATGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90340659 47 - 90373283 cagttggttccaggaacaaagggagtgtctgaagacagcagtgatgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 141596 47 - 179258 cagttggtgccaggaacaAAGGGAGTGTCTGAGGACAGCAGTGATGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5610940 47 - 5823884 cagttggttccaggaacaAAGggagtgtctgaagacagcagtgatat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 96166 45 + 372756 --gtttggtccgggaacaAAGCGACTGTCTGAAGACAGCAGTGATGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16329394 45 + 16356641 --gtttggtcccgaaacaAAGCAACTGTCTGAAGACAGCAGTGATGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1200875 45 + 1231380 --gtttggtcctggaacaAAGCGACTGTCTGAAGGCAGCAGTGAGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2732293 45 + 11732439 --gtttggtccgtgaacaGAGCAACTGTCTGAAGACAGCAGTGATGT i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47647584 41 + 47698779 CAGATGGGTCTT------AAGGGAAGATCTAAACAGAAGACAGATGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e otoGar3.GL873542 22898575 21 + 22939663 I a score=3566288.000000 s hg38.chr20_KI270870v1_alt 162884 376 + 183433 GATCAC-C--TGT---TTTAGGAGGACCACTCGCCAGAGCCCAGGG--GAATGGTGGGAGGGGTGG--GGAG--------------------------AGGTGAGGGGAGCTGGGACAGGGCAAGGAGGGATGTATGGAGGACGTGTCCCCT------GGCAGTAGGAAGAGAGTCAAGGATGACTCCAGGGCTTCTGTAATTTGAAACAGTCA-CAAATAACCACAAGCTC-TCAGGT-GGAAGGAC---ACTGAGAGCCC-CATGAAGGTCATGAGG-TGGTGGGCCACCTCAGGTCCGTGGATCCAGGACC----ATGGATCAA------CAAGAGAAGTGAGGTCTCCCTGGGACCACATAACGTGGTGAAGGCACCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGGAGGA------------A s panTro5.chr20 66498313 377 + 66533130 GATCACAC--TGT---TTTAGGAGGACCACTCGCCAGAGCCCAGGG--GAATGGTGGGAGGGGTGG--GGAG--------------------------AGGTGAGGGGAGCTGGGACAGGGCAAGGAGGGATGTATGGAGGACGTGTCCCCT------GGCAGTAGGAAGAGAGTCAAGGATGACTCCAGGGCTTCTGTAATTTGAAACAGTCA-CAAATAACCACAAGCTC-TCAGGT-GGAAGGAC---ACTGAGAGCCC-CATGAAGGTCATGAGG-TGGTGGGCCACCTCAGGTCCGTGGATCCAGGACC----ATGGATCAA------CAAGAGAAGTGAGGTCTCCCTGGGACCACATAACGTGGTGAAGGCACCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGGAGGA------------A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62165772 377 + 62195757 GATCACAC--TGT---TTTAGGAGGACCACTCGCCAGAGCCCAGGG--GAATGGTGGGAGGGGTGG--GGAG--------------------------AGGTGAGGGGAGCTGGGACAGGGCAAGGAGGGATGTATGGAGGACGTGTCCCCT------GGCAGTAGGAGGAGAGTCAAGGATGACTCCAGGGCTTCTGTAATTTGAAACAGTCA-CAAATAACCACAAGCTC-TCAGGT-GGAAGGAC---ACTGAGAGCCC-CATGAAGGTCATGAGG-TGGTGGGCCACCTCAGGTCCGTGGATCCAGGACC----ATGGATCAA------CAAGAGAAGTGAGGTCTCCCTGGGACCACATAACGTGGTGAAGGCACCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGGAGGA------------A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 551940 377 - 578057 GATCACAC--TGT---TTTAGGAGGACCACTCGCCAGAGCCCAGGG--GAATGGTAGGAGGGGTGG--GGAG--------------------------AGGTAAGGGGAGCTGGGACAGGGCAAGGAGGGATGTATTGAGGACGTGTCCCCT------GGCAGTAGGAAGAGAGTCAAGGATGACTCCAGGGCTTCTGTAATTTGAAACAGTCA-CAAATAACCACAAGCTC-TCAGGT-GGAAGGAC---ACTGAGAGCCC-CATGAAGGTCATGAGG-TGGTGGGCCACCTCAGGTCCGTGGATCCTGGACC----ATGGATCAA------CAAGAGAAGTGAGGTCTCCCTGGGACCACATAACGTGGTGAAGGCACCGGCCTTtggttttcaaactctgctcctaagtggagctccagggtctggggagga------------a i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110073335 389 - 110113093 GATCACAC--TGT---TTTAGGAGGACTACTCGCCAGAGCCCAGGG--GAATGTTGGGAGGGGTGG--GGAG--------------------------AGTTGAGGGGAGCTGGGACAGGGCAAGGAGGGATGTatggaggacgtgtcccct------ggcagtaggaagagagtcaaggatgactccagggcttctgTAATTTGAAACAGTCA-CAAATAACCACAAGCTC-TCAGGT-GGAAGGAC---ACTGAGAGCCC-CATGAAGGTCACGAGG-TGGTGGGCCACCTCAGGTCCATGGATCCAGGACC----ATGGATCAA------CAAGAGAAGGGAGGTCTCCCTGGGACCACATAACGTGGTGAAGGCACTGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGGGGGAAATGCTGGGTTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92813326 366 - 92844088 GATCACAC--TGT---TTTAGGAGGACCACTCGCCAGAGCCCaggg--gagtggtgggaggggtgg--ggag--------------------------aggtgaggggagctggggcagggcaaggagggATGTATGGAGGACATGTCCCCT------GGCAGTAGGAAGAGGGTCAAAGATGACTCCAGGGCTTCTGTAATTTGAAA---------------CATAAGCTC-TCAGGT-GGAAGGACACTACTGAGAGCCC-CATGAAGGTCATGAGG-TGGTGGGCCATCTCAGGTCCATGGATCCAGGACC----ATGGATCAA------CAAGAGAAGTGAGGTTTCCCTGGGACCACATAACGTGTTGAAGGCACCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGTAGGA------------A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96478851 366 + 96509753 gatcacac--tgt---tttaggaggaccactcGCCAGAGCCCAGGG--GAGTGGTGGGAGGGGTGG--GGAG--------------------------AGGTGAGGGGAGCTGGGGCAGGGCAAGGAGGGATGTATGGAGGACATGTCCCCT------GGCAGTAGGAAGAGGGTCAAAGATGACTCCAGGGCTTCTGTAATTTGAAA---------------CATAAGCTC-TCAGGT-GGAAGGACACTACTGAGAGCCC-CATGAAGGTCATGAGG-TGGTGGGCCATCTCAGGTCCATGGATCCAGGACC----ATGGATCAA------CAAGAGAAGTGAGGTTTCCCTGGGACCACATAACGTGTTGAAGGCACCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGTAGGA------------A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16948921 366 - 16982598 GATCACAC--TGT---TTTAGGAGGACCACTCGCCAGAGCCCaggg--gagtggtgggaggggtgg--ggag--------------------------aggtgaggggagctggggcagggcaaggagggATGTATGGAGGACATGTCCCCT------GGCAGTAGGAAGAGGGTCAAAGATGACTCCAGGGCTTCTGTAATTTGAAA---------------CATAAGCTC-TCAGGT-GGAAGGACACTACTGAGAGCCC-CATGAAGGTCATGAGG-TGGTGGGCCATCTCAGGTCCATGGATCCAGGACC----ATGGATCAA------CAAGAGAAGTGGGGTCTCCCTGGGACCACATAACGTGTTGAAGGCACCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGTAGGA------------A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3750911 366 - 3785965 GATCACAC--TGT---TCTAGGGGGACCACTCGCCAGAGCCCAAGA--GAGTGGTgggaggggtag--ggag--------------------------aggtgaggggagctggggcagggcaaggagggaTGTATGGAGGACATGTCCCCT------GGCAGTAGGAAGAGGGTCAAGGATGACTCCAGGGCTTCTGTAATTTGAAA---------------CATAAGCTC-TCAGGT-GGAGGGACACTACTGAGAGCCC-CACGAAGGTCATGAGG-TGGTGGGCCATCTCAGGTCCATGGATCCAGGACC----ATGGATCAA------CAAGAGAAGTGAGGTCTCCCTGGGACCACATAACGTGTTGAAGGCACCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGTGGGA------------A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90340706 366 - 90373283 gatcacac--tgt---tttaggaggaccactcGCCGGAGCCCaggg--gagtggtgggaggggtgt--ggag--------------------------aggtgaggggagCTGGGGCAAGGCAAGGAGGGATGTATGGAGGACATGTCCCCT------GGCAGTAGGAAGAGGGTCAAGGATGACTCCAGGGCTTCTGTAATTTGAAA---------------CATAAGCTC-TCAGGT-GGAAGGACACCACTGAGAGCCC-CATGCAGGTCATGAGG-TGGTGGGCCATCTCAGGTCCATGGATCCAGGACC----ATGGATCAA------CAAGAGAAGTGAGGTCTCCCTGGGACCACATAACGTGTTGAAGGCATCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGTAGGA------------A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 141643 366 - 179258 GATCACAC--TGT---TCTAGGAGGACCACTCGCCAGAGCCCaggg--gagtggtgggaggggtgg--ggag--------------------------aggtgaggggagctggggcagggcaaggagggATGTGTGAAGGACATGTCCCCT------GGCAGTAGGAAGAGGGTCAAGGAGGACTCCAGGGCTTCTGTAATTGGAAA---------------CATAAGCTC-TTAGGT-GGAGGGACACTACTGAGAGCCC-CACGAAGGTCATGAGG-TGGTGGGCCATCTCAGGTCCATGGATCCAGGACC----ATGGAGCAA------CAAGAGAAGTGAGGTCTCCCTGGGACCACATAACGTGTTGAAGGCACCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGTAGGA------------A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5610987 366 - 5823884 gatcacat--tgt---tttaggaggaccactcACCAGAGCCCAggg--gagtggtgggaggggtgg--ggag--------------------------aggtgaggggagctggggCAGGCCAAGGAGGGATATATGGAGGACATGTCCCCT------GGCAGTAGGAAGAGGGTCAAGGATGACTCCAGGGCTTCTGTAATTTGAAA---------------CAGAAGCTC-TCAGGT-GGAAGGACACTACTGAGAGCCC-CATGAGGGTCATGCGG-TGGTGGGCCATCTCAGGTCCGTGGATCCAGGACC----ATGGATCAA------CAAGAGAAATGAGGTCTCCCTGGGACCACATAACGTGTTGAAGGCACCGGCCTTTGGTTTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCTGGGGAGGA------------A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 96211 373 + 372756 GATCACAC--TGT---TTCAGGAGGACCACTCGCCAGAGCCCAGGG--GAGCGATGGGAAGGGTGG--GGAG--------------------------AGGTGGGGGAAGCTGGGGCAGGGTAAGGAGGGAT-TATGGGGGACGTGTCCCCT------GGCAGTGGGAAGAGGGTCAAGGATGACTCCAGGGCTTCTGTAATTTGAAAAAGTCA-CAGATAACCACAGGCTC-TCGGGT-GGAAGGAC---GCTGAGAACCC-CGTGAAGGTCATGAGG-TGGTGGGCAACCTCAGGTCCATGGATCCAGTACC----GTGGATCAA------CAAGAGAAGTGAGATCTCCGTGGGACCACAT-ACGTGGTGAGGGCGCCGGCCTTTGG-TTTCAAACTCTGCTCCTAAGTGGAGTTCCAGGGTCTG-GGAGGA------------A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16329439 382 + 16356641 GATCACACTGTGT---TTTAGGGGGACCACTGGCCAGAGCCCAGGA--GAGCGACGGGAAGGGTGG--GGAG--------------------------AGGCGAGGGAAGCTGGGGCAGTGCAAGGAGGGAT-TACGGGGGACGTGTCCCCT------GGCAGTGGGAAGAGGGTCAAGGATGACCCCGGGCCTTCTGTAATCTGAAAAAGTCA-CAGATAACCACAGGCTC-TCGGGT-GGAAAGAC---GCTGAGAGCCC-CGTGAAGGTCATGAGG-TGGTGGGCAACCTCAGGTCCACGGATCCAGTACC----ACGGATCAGGATCACCGGGAGAAGTGAGATCACCCCGGGACCACAC-ACGTGGTGAGGGCGCCGGCCTTTGG-TTTCAAACTCTGCTCCTAAGTGGAGCTCCAGGGTCGGAGGAGGA------------A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1200920 366 + 1231380 GACCACCCTGTGT---TTTAGGAGGGACACTCGCCAGAGCCCAGGG--GAGCGATGGGAAGGGTGG--GGAG--------------------------AGGTGAGGGAAGCTGGGGCCGGGCAAGGAGGGAT-TACGGGGGACGTGTCCCCT------GGCAGTGGGAA---GGTCAAGGATGACTCCAGGGCTTCTGTGATTTGAAAAAGTCA-CAGATAACCACAGGGTC-TT-GGT-GGAAGGAC---GCTGAGAGCCC-CGTGAGGGTCATGAGG-TGGTGGGCAA---------CATGGATCTAGTACCACGGACGGATCAA------CAAGAAAAGTGAGATCTCCCTGGGGCCACAC-AGGTGGTGA-GGTGCCGGCCTTTGG-TTTCAAGCTCTGCTCCTAAGTGGAACTCCAGGGTCTGGGGAGGA------------A i cebCap1.NW_016107870v1 C 0 I 445 s aotNan1.NW_018500483v1 2732338 334 + 11732439 GATCACACTGTGT---TTCAGGAGGACCACTTGCCAGAGCCCAGGG--GA------------------------------------------------------GGGAAGCTGGGGCAGGGCAAGGAGGGAT-TATGGGGG-CGTGTCCCCT------GGCAGTGGGAagagggtcaaggatgactccagggcttctgTAATTTCAAAAAGTCA-CCGGTAACCACAGGCTC-TCGGGT-GGAAGGAC---GCTGAGAGCCC-CGTGAAGGTCATGAGG--GGTGGGCAACCTGAGGCCC------------------ACGGATCAG------CGAGAGAAGTGAGATCCCCCCGGGACCACGG-ACGTGGTGAGGGCGCCGGCCTCTGG-TTGCAAACTGTGCTCCTAAGTGGAGCTCCAGGGTCTGGGGAGGA------------A i aotNan1.NW_018500483v1 C 0 I 422 s otoGar3.GL873542 22898596 351 + 22939663 GATCA-AT--TGTG--TTTAGGAAGACCAGAGGCC-TAGCCCAGGC---AGTGGGAGGGGGGCTAG--TGAG--------------------------ACTGGAGGGGAGCTGAGGCAGGAC-AGGATGGATGTAGGAGGG--GTGTCCCCTGACTCGGACAGCTGGAGG-GGGTCAAGGGCGGCTCCAGGGCTTCTGTCTTTGGAAACGGTTAGCAGGCA--TTTAGGCTCTTCAGGT----AGGGT---GCTGAGAGCCCGTGTGAAGGTCATGAGGTTGGTGGGAGGCTACAGAGTTGTGGACTTAGGGCT----ATGTACAAA------GCAGAGAAGCGAGTTCCGCCAGGGGCCACAG-ACAGAGCAAAGGCGCTGCCTTCCGG------------------------AGCGCTAGGGTCCGGGTAGGA------------G i otoGar3.GL873542 I 21 C 0 s canFam3.chr24 47647625 275 + 47698779 GATCATAC--CGTGCTTTTAGGAAGACCACTGG-CAGAGCCCAGGGAGGGGTAGTGAGAGGGTAGGCAGGAGGTCAGTTAAGACATTCTCCTAGCTAAAGGTGAGGGATACAGGGACAAGACAGGGTGGCGTATACGGAGGACATA-CCCCT------GACAGTGGGGAGGGGGTCAAGGATGGCTTTAAGGCTC---TGATTTGAAACAGTCA-CAGATGACCAAAGGTAT-GCAGGTAGGCAGGAC---TCCGAG-TCAG-GGTCAAGATCATGAGG-T--TGG------TCAGGGTCAAGG------------------------------------------------------------------------------------------------------------------------------------------------ i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I a score=546152.000000 s hg38.chr20_KI270870v1_alt 163260 92 + 183433 TGCCGAGTTAGGAGG--------GAGGCGGGAACCGGAGACCCAGGCCCACTCGTC--CGCCCCAGCGACGCTGGC-ACT---TGCACATATGAGGCGGCTTGCAT s panTro5.chr20 66498690 80 + 66533130 TGCCGAGTTAGGAGG--------GAGGCGGGGACCGGAGACCCAGGCCCACT--------------TGACGCTGGC-ACT---TGCACATATGAGGCGGCTTGCAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166149 80 + 62195757 TGCCGAGTTAGGAGG--------GAGGCGGGGACCGGAGACCCAGGCCCACT--------------TGGCGCTGGC-ACT---TGCACATATGAGGCGGCTTGCAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 552317 95 - 578057 tgccgagttaggagg--------gaggcgggaaccggagacccaggcccactcgtc--cgcagcagcgacgctggc-acttgctgcacatatggggcggcttgcac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110073724 94 - 110113093 TGCGGGGTTCGGAGG--------GAGGCGGG-ACCGGAGACCCAGGCCCACTCGTC--CGCAGCAGCGACGCTGGC-ACTTGCTGCACATCTGGGGCGGCTCGCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92813692 94 - 92844088 TGCGGCG-CAGGAGG--------GAGGCGGGGACGGGAGACCCAGGCCCACTCATC--CGCAGCAGCGACGCTGGC-ACTTGCTGCACATATGGGGTGGTTTGCAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479217 94 + 96509753 TGCGGCG-CAGGAGG--------GAGGCGGGGACGGGAGACCCAGGCCCACTCATC--CGCAGCAGCGACGCTGGC-ACTTGCTGCACATATGGGGTGGTTTGCAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16949287 94 - 16982598 TGCGGCG-CAGGAGG--------GAGGCGGGGACGGGAGACCCAGGCCCACTCATC--CGCAGCAGCGACGCTGGC-ACTTGCTGCACATATGGGGTGGTTTGCAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3751277 94 - 3785965 TGCGGGG-CAGGAGG--------GAGGCGGGGACGGGAGACCCAGGCCCACTCGTC--CGCAGCAGCGACGCAGGC-ACTTGCTGCACATATGGGGTGGTTTGCAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341072 94 - 90373283 TGCGGGG-CAGGAGG--------GAGGCGGGGACGGGAGACCCAGGCCCACTCATC--CGCAGCAGCGACGCTGGC-ACTTGCTGCACATACAAGGTGGTTTGCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142009 94 - 179258 TGCGGGG-CAGGAGG--------GAGGCGGGGACGGGAGACCCAGGCCCACTCGTC--CGCAGCAGCGACGCTGGC-ACTTGCTGCACATATGGGGTGGTTTGCAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5611353 94 - 5823884 TGCGGGG-CAGGAGG--------GAGGCGAGGACGGGAGACCCAGGCCCACTCGTC--CGCAACAGCGATGCTGGC-ACTTGCTGCACATATGGGGTGGTTTGCAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 96584 94 + 372756 TGCGGGG-CAGGAGG--------GAGGCCGGGACCGGAGACCCAGGCCCATTCCTC--TGCAGCAGTGACGCTGGC-ACTTGCCGCACATACGAGGCTGTTTGCAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16329821 83 + 16356641 TGCGGGG-CAGGAGGGGCAGGACGAGGCCGGGACCGGAGACCCAGGCCCGCCGCTC--CGCAGCAG-----------------CACACGT---GGGCGGCTCGCAC i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22898947 61 + 22939663 --CGTGG-GAGGAGG--------GACGCGGA----GGAGACCCAGGCCCCTGTCCCAGCGCACCAG-----------ACGTGCCCCA------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47647900 77 + 47698779 -------TCATGAGA--------TTGGTGG------------CAAGCCCTCTCCCC--AACAGCAGCAGTGCTTGTAAACTGTTGTAGAGATGGGGTGACTTACAA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1201286 445 + 1231380 I e aotNan1.NW_018500483v1 2732672 422 + 11732439 I a score=318435.000000 s hg38.chr20_KI270870v1_alt 163352 36 + 183433 GGCTGTGCTTGAAGAAAGGGTTCTGCAGCTACAGCC- s panTro5.chr20 66498770 36 + 66533130 GGCTGTGCTTGAAGAAAGGGTTCTGCAGCTACAGCC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166229 36 + 62195757 GGCTGTGCTTGAAGAAAGGGTTCTGCAGCTACAGCC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 552412 36 - 578057 ggctgtgcttgaagaaagggttctgcagctACAGCC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110073818 36 - 110113093 GGCTGCTCTTGAAGAAAGGGTTCTGCAGCTAAAGCC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92813786 36 - 92844088 GGCTGTACTTGAAGAAAAGTTTCCGCAGCTAAAGCC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479311 36 + 96509753 GGCTGTACTTGAAGAAAAGGTTCCGCAGCTAAAGCC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16949381 36 - 16982598 GGCTGTACTTGAAGAAAAGGTTCCGCAGCTAAAGCC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3751371 36 - 3785965 GGCTGTACTTGAAGAAAAGGTTCTGCAGCTAAAGCC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341166 36 - 90373283 GGCTGTACTTGAAGAAAAGGTTCTGCAGCCAAAGCC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142103 36 - 179258 GGCTGTACTTGAAGAAAAGGTTCTGCAGCTAAAGCC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5611447 36 - 5823884 GGCTGTACTTGAAGAAAAGGTTCTGCAGCTAAAGCC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 96678 30 + 372756 GGCTGTCCTTGAAGAAAGGGTTCTGCAGCT------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16329904 30 + 16356641 GGCTGCGCTGGAAGAAACGGTTCTGCAGCT------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1201731 36 + 1231380 GGCTGTGCTTGGAGAAGGGGTTCTGCAGCTAGAGCC- i cebCap1.NW_016107870v1 I 445 I 440 s otoGar3.GL873542 22899008 36 + 22939663 GTCCGTGAGTGCAGAAAGATCACTGCGGCGAAAGCC- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47647977 37 + 47698779 AACTGTGTTCAAAGAAAAGGTTCTGTTGCTAAAAGCT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e aotNan1.NW_018500483v1 2732672 422 + 11732439 I a score=194347.000000 s hg38.chr20_KI270870v1_alt 163388 23 + 183433 TATCTGCAAAGCCCCACGCGAAG s panTro5.chr20 66498806 23 + 66533130 CATCTGCAAAGCCCCACGCGAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166265 23 + 62195757 CATCTGCAAAGCCCCACGCGAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 552448 23 - 578057 CATCTGCAAAGCCCCACGCGAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110073854 23 - 110113093 CATCTGCAAAGCCCCACGCGAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92813822 23 - 92844088 CATCTGCAAAGCCCCACGCGAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479347 23 + 96509753 CATCTGCAAAGCCCCACGCGAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16949417 23 - 16982598 CATCTGCAGAGCCCCACGCGAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3751407 23 - 3785965 CATCTGCAAAGCCCCACGCGAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341202 23 - 90373283 CATCTGCAAAGCCCCACGCGAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142139 23 - 179258 CATCTGCAAAGCCCCACGCGAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5611483 23 - 5823884 CATCCGCAAAGCCTCACACGAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 96708 16 + 372756 -------AAAGCCCCATGCGAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16329934 16 + 16356641 -------GAAGCCCCACGCGAGG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22899044 22 + 22939663 CACCTG-GAAACCCCGCGCGAGG i otoGar3.GL873542 C 0 I 25 s canFam3.chr24 47648014 23 + 47698779 CATGTGGAAAACCACATGTGAGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2732672 422 + 11732439 I a score=44555.000000 s hg38.chr20_KI270870v1_alt 163411 5 + 183433 TTTGG s panTro5.chr20 66498829 5 + 66533130 TTTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166288 5 + 62195757 TTTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 552471 5 - 578057 TTTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110073877 5 - 110113093 TTTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92813845 5 - 92844088 TTTGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479370 5 + 96509753 TTTGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16949440 5 - 16982598 TTTGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3751430 5 - 3785965 TTTGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341225 5 - 90373283 TTTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142162 5 - 179258 TTTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5611506 5 - 5823884 TTTGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 96724 5 + 372756 TTTGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16329950 4 + 16356641 -CTGG i saiBol1.JH378156 C 0 C 0 s canFam3.chr24 47648037 5 + 47698779 TTCGG i canFam3.chr24 C 0 I 1388 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2732672 422 + 11732439 I e otoGar3.GL873542 22899066 25 + 22939663 I a score=637448.000000 s hg38.chr20_KI270870v1_alt 163416 84 + 183433 GCAATGGGCTGtgtgaacccagaaaatgggagacaggtctcagttaatttacaaagtttattttgccaagggtgaggacgcgcc s panTro5.chr20 66498834 84 + 66533130 GCAATGGGCTGtgtgaacccagaaaatgggagacaggtctcagttaatttacaaagtttattttgccaagggtgaggacgcgcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166293 84 + 62195757 GCAATGGGCTGtgtgaacccagaaaatgggagacaggtctcagttaatttacaaagtttattttgccaagggtgaggacgcgcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 552476 84 - 578057 GCAATGGGCTGtgtgaacccagaaaatgggagacaggtctcagttaatttacaaagtttattttgccaagggtgaggacgcgcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110073882 84 - 110113093 GCAGCGGGCTGtgtgaacccagaagatgggagacaggactcagttaatttagaaagtttattttgccaaggttgaggacgcgcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92813850 84 - 92844088 GCAATGGGCTGtgtgaaccctgaaaatgtgagacaggtctcagttaatttagaaagtttattttgccaaggttgaggacgcgcc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479375 84 + 96509753 GCAATGGGCTGtgtgaaccctgaaaatgtgagacaggtctcagttaatttagaaagtttattttgccaaggttgaggacgcgcc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16949445 84 - 16982598 GCAATGGGCTGtgtgaaccctgaaaatgtgagacaggtctcagttaatttagaaagtttattttgccaaggttgaggacgcgcc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3751435 84 - 3785965 GCAATGGGCTGtgtgaaccctgaaaatgtgagacaggtctcagttaatttagaaagtttattttgcccaggttgaggacgcacc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341230 84 - 90373283 GCAATGGGCTGtgtgaaccctgaaaatgtgagacaggtctcagttaatctagaacgtttattttgccaaggttgaggacgcgcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142167 84 - 179258 GCAATGGGCTGtgtgaaccctgaaaatgtgagacaggtctcagtttatttagaaagtttattttgccaaggttgaggacgcgcc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5611511 84 - 5823884 GCAATGGGCTGtgtgaacccagaaaatgtgagacaggtctcagttaatttagaaagtttattgtgccaaggttgaggacgcgcc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 96729 84 + 372756 GCAATGGGTTGtgtgaacccagaaaatctgagacaggtctcagttaattcaggaagtttgttttgccaaggttgaggacgcgcc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16329954 84 + 16356641 GCAATGGGTCGtgtgaacccggagaggcggaggcaggtctcggttaatttagaaagttaatcttgccgaggttgaggacgcgcc i saiBol1.JH378156 C 0 I 1917 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47648042 1388 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2732672 422 + 11732439 I e otoGar3.GL873542 22899066 25 + 22939663 I a score=2722574.000000 s hg38.chr20_KI270870v1_alt 163500 461 + 183433 cgtgacacagcctcaggaagtcct---gacatgtgcccaaggtggtcggggcacagcttggttttatacatttagggagacaggatacatccatcgatacatgtaagaagcacatcggttcggtctggaaagacgggacaacttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggccacagataggtgagacaccaacggttaaattcttttgagtttctcatttgccttttcaaaggaggcaaatcagatatgtatctatctaagtgagcagag----gagtgactttgaatggaatgggaagcaggcctgccctaagcagtttcctgctggagttttccttagtgatcttgggggcccaggatatcttcctttcacaGCTGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGGGTGGCCGTCCGCGTGGCAGGGCGGGGGTCCCA s panTro5.chr20 66498918 464 + 66533130 cgtgacacagcctcaggaagtcctgacgacatgtgcccaaggtggtcggggcacagcttggttttatacatttagggagacatgatacatccatcaatacatgtaagaagtacattggttcggtctggaaagacgggacaacttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacagataggtgagacaccaacggttaaattcttttgagtttctgatttgcctttccaaaggaggcaaatcagatctgtatctatctcagtgagcagag----gagtgactttgaatggaatgggaagcaggcttgccctaagcagtttcctgctggagttttccttagtgatcttgggggcccaggatatcttcctttcacaGCCGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGGGTGGCCGTCCGCGTGGCAGGGCGGGGGTCCCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166377 464 + 62195757 cgtgacacagcctcaggaagtcctgacgacatgtgcccaaggtggtcggggcacagcttggttttatacatttagggagacatgatacatccatcaatacatgtaagaagtacattggttcggtctggaaagacgggacaacttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacagataggtgagacaccaacggttaaattcttttgagtttctgatttgcctttccaaaggaggcaaatcagatatgtatctatctcagtgagcagag----gagtgactttgaatggaatgggaagcaggcttgccccaagcagtttcctgctggagttttccttagtgatcttgggggcccaggatatcttcctttcacaGCCGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGGGTGGCCGTCCGCGTGGCAGGGCGGGGGTCCCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 552560 464 - 578057 cgtgacacagcctcaggaagtcctgacgacatgtgcccaaggtggtcggggcacagcctggttttatacatttagagagacatgatatatccatcaatacatgtaagaagtacattggttcggtctggaaagacgggacaactagaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacagataggtgagacaccaacggttaagttcttttgagtttctgatttgcctttccaaaggaggcaaatcagatatgtatctatctcagtgagcagag----gagtgactttgaatggaatgggaagcaggcttgccctaagcagtttcctgctggagttttccttagtgatcttgggggcccaggatatcttcctttcacaGCTGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGGGTGGCCGTCCGCGTGGCAGGGCGGGGGTCCCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110073966 464 - 110113093 cgtgacacagcctcaggaagtcctgacggcatgtgcccaaggtggtcggggcacagcttggttttatacatttagggagacatgagacatccatcaatacgtgtaagaagtacattggttcggtctggaaagacgggacaacttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacagataggtgggacaccaacggttaaattcttttgagtttctgatttgcctttccaaaggaggcaaatcagatgtgtatctatctcagcgagcaggg----gagtgactctgaatggaatgggaagcaggcttgcccgaggcagtttcctgctggagttttccttagtgatcttgggggcccaggatattttcctttcacaGCTGATTTCACAAAGCCGGCTCGGTAGGAGGGCCCCAGGGCCAGGTGGCCGTCCGGGTGGCAGGGCGGGGGTCCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92813934 452 - 92844088 cgtgacacagcctca-gaaggcctggcgacctgtgcccaacgtggtcggggcacagcttggttttatacatttagggagacatgacacatcagtcaatacatgtaagaagtacattgcttcggtctggaaaggcggg---acttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacggttaggtgagacacaaaccgttacgttcttttgagtttctgatttgcctttccaaaggaggcaaatcagatacacatctatctcagtgagcagagagaggagtgactttgaatggaatgggaagcaggtttgccctaagcagtttcctgctggagttttccttagtgatcttgggggcccaggatattttcctttcacaGCTGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGG------------GTGGCAGGGCGGGGGTCCCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479459 452 + 96509753 cgtgacacagcctca-gaaggcctggcgacctgtgcccaacgtggtcggggcacagcttggttttatacatttagggagacatgacacatcagtcaatacatgtaagaagtacattgcttcggtctggaaaggcggg---acttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacggttaggtgagacacaaaccgttacgttcttttgagtttctgatttgcctttccaaaggaggcaaattagatacacatctatctcagtgagcagagagaggagtgactttgaatggaatgggaagcaggtttgccctaagcagtttcctgctggagttttccttagtgatcttgggggcccaggatattttcctttcacaGCTGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGG------------GTGGCAGGGCGGGGGTCCCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16949529 452 - 16982598 cgtgacacagcctca-gaaggcctggcgacctgtgcccaacgtggtcggggcacagcttggttttatacatttagggagacatgacacatcagtcaatacatgtaagaagtacattgcttcggtctggaaaggcggg---acttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacggttaggtgagacacaaaccgttacgttcttttgagtttctgatttgcctttccaaaggaggcaaatcagatacacatctatctcagtgagcagagagaggagtgactttgaatggaatgggaagcaggtttgccctaagcagtttcctgctggagttttccttagtgatcttgggggcccaggatattttcctttcacaGCTGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGG------------GTGGCAGGGCGGGGGTCCCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3751519 452 - 3785965 cgtgacacggcctca-gaaggcctggcgacctgtgcccaacgtggtcggggcacagcttggttttatacatttagggagacatgatacatcaatcaatacatgtaagaagtacattgcttcggtctggaaaggcggg---acttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacagataggtgagacacaaaccgttacgttcttttgagtttctgatttgcctttccaaaggaggcaaatcagatacacatctatctcagtgagcagagagaggagtgactttgaatggaatgggaagcaggtttgccctaagcagtttcctgctggagttttccttagtgatcttgggggcccaggatattttcctttcacaGCTGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGG------------GTGGCAGGGCGGGGGTCCCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341314 452 - 90373283 cgtgacacagcctca-gaagtcctggcgacctgtgcccaacgtggtcggggcacagcttggttttatacatttagggagacatgacacatcaatggatacatgtaagaagtacgttgcttcggtctggaaaggcggg---acttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacggataggtgagacacaaaccgttccgttcttttcagtttctgatttgcctttccaaaggaggcaaatcagatccacatccatctcagtgagcagagagaggagtgactctgaatggaaggggaagcaggtttgccctgagcagtttcctgctggagttttccttagtgatcttgggggcccaggatattttcctttcacaGCTGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGG------------GTGGCAGGGCGGGGGTCCCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142251 441 - 179258 cgtgacacagcctca-gaaggcctggcgacctgtgcccaacgtggtcggggcacagcttggttttatacatttagggagacatgatacatcagtcaatacatgtgagaagtacattgcttcggtctggaaaggcggg---acttgaagcaaaggcaggaagactccaagcggggacggagcgtccaggtcacggataggtgagacacaaaccgttacgttcttttgagtttctgatttgcctttccaaaggagg-----------cacatctatctcagtgagcagagagaggtgtgactttgaatggaatgggaagcaggtttgccctaagcagtttcctgctggagttttccttagtgatcttgggggcccaggatattttcctttcacaGCTGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGG------------GTGGCAGGGCGGGGGTCCCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5611595 451 - 5823884 cgcgacacagcctcaggaagtcctggcgacctgtgcccaacgtggtcggggcacagcttggttttatacatttagggagacatgatacatcaatcaatacatgtaagaagtacattgcttcggtctggaaaggcgggacaacttgaagcaaaggcaggaagactccaagcggggagggagcgtccaggtcacggataggtgagacacaaaccgttacgttctttagagtttctgatttgcctttccaaaggaggcaaatcagatacatatctatctcagtgagcagagag----gcgactttgaatggaaagggaagca-gtctgccctaagctgtttcctgctggagttttccttagtgatcttgggggcccaggatattttcctttcacaGCTGATTTCACAAAGCCGGCTGGGTAGGAGGGCCCCAGGGCCGG------------GTGGCAGGGCGGGGGTCCCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 96813 347 + 372756 -atgacacagcgtagggaagtcctggcgacaggtaagca--gtggtcaggg--------------------ttagggggacagaagacatcaa----------cacgcagcgcattggttcggtccggaaaggcgggacaacttgaagcaaaggggg----------------------------aggttacggataggttacacacaaacggttacattcttcagagtttcctattagccttttcaaagacgccaagccagatacctatctagctcagtgagcagag----cagtgactttgaacgca-----aggcagg-ttgccctaagcagtttcctgccagaattttcctttgtgatcttgg-------------------------------------AAGCCGGTTGGGTAGGAGGGCCCCAGGGCCAG------------GTGGCAGAG-AGGGGTCCTA i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47648042 1388 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2732672 422 + 11732439 I e otoGar3.GL873542 22899066 25 + 22939663 I a score=234634.000000 s hg38.chr20_KI270870v1_alt 163961 30 + 183433 GGGCGGCTGTGCTTGGTGCTGGGAGGCCGC s panTro5.chr20 66499382 30 + 66533130 GGGCGGCTGTGCTTGGTGCTGGGAGGCCGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166841 30 + 62195757 GGGCGGCTGTGCTTGGTGCTGGGAGGCCGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553024 30 - 578057 GGGCGGCTGTGCTTGGTGCTGGGAGGCCGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074430 30 - 110113093 AGGCGGCTGTGCTTGGTTCTGGGAGGCCGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814386 30 - 92844088 GGGCGGCTGTGCTTGGTGCTGGGAGGCCGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479911 30 + 96509753 GGGCGGCTGTGCTTGGTGCTGGGAGGCCGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16949981 30 - 16982598 GGGCGGCTGTGCTTGGTGCTGGGAGGCCGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3751971 30 - 3785965 GGGCGGCTGTGCTTGGTGCTGGGAGGCCGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341766 30 - 90373283 GGGCGGCTGTGCTTGGTGCTGGGAGGCCGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142692 30 - 179258 GGGCGGCTGTGCGTGGTGCTGGGAGGCCGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5612046 30 - 5823884 GGGCGGCTGTGCTTGGTGCCGGGAGGCCGC i colAng1.NW_012114444v1 C 0 M 550 s calJac3.chrUn_GL286459 97160 29 + 372756 -GGCGGCTACGCGCCGTGCAGGGAGGCCGC i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2733094 30 + 11732439 GGGCGGCTGCGCGCGCTGCAGGGAGGCCGC i aotNan1.NW_018500483v1 I 422 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47648042 1388 + 47698779 I e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e otoGar3.GL873542 22899066 25 + 22939663 I a score=200358.000000 s hg38.chr20_KI270870v1_alt 163991 27 + 183433 CCGAGGGCAGCGCCGGCCCCGAGTCAG s panTro5.chr20 66499412 27 + 66533130 CCGAGGGCAGCGCCGGCCCCGAGTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166871 27 + 62195757 CCGAGGGCAGCGCCGGCCCCGAGTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553054 27 - 578057 CCGAGGGCAGCGCCGGCCCCGAGTCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074460 27 - 110113093 CCGAGGGCAGCGCCGGCCCCGAGTCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814416 27 - 92844088 CCGAGGGCAGCGCCGGCCCCGAGTCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479941 27 + 96509753 CCGAGGGCAGCGCCGGCCCCGAGTCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950011 27 - 16982598 CCGAGGGCAGCGCCGGCCCCGAGTCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752001 27 - 3785965 CCGAGGGCAGCGCCGGCCCCGAGTCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341796 27 - 90373283 CCGAGGGCAGCGCCGGCCCCGAGTCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142722 27 - 179258 CCGAGGGCAGCGCCGGCCCCGAGTCAG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97189 27 + 372756 CCGAGGGCAGCGCCGGCCCGGAGTCCG i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2733124 27 + 11732439 CCGAGGGCAGCGCCGGCCCCAAGTCAG i aotNan1.NW_018500483v1 C 0 I 12 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47648042 1388 + 47698779 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e otoGar3.GL873542 22899066 25 + 22939663 I a score=129767.000000 s hg38.chr20_KI270870v1_alt 164018 23 + 183433 CAGCCGCAGGGCACCCTGGAGAT s panTro5.chr20 66499439 23 + 66533130 CAGCCGCAGGGAACCCTGGAGAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166898 23 + 62195757 CAGCCGCAGGGAACCCTGGAGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553081 23 - 578057 CAGCCGCAGGGCACCCTGGAGAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074487 23 - 110113093 CCGCCGCAGGGCACCCTGGAGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814443 23 - 92844088 CCGCCGCAGGGCACCCTGGAGAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479968 23 + 96509753 CCGCCGCAGGGCACCCTGGAGAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950038 23 - 16982598 CCGCCGCAGGGCACCCTGGAGAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752028 23 - 3785965 CCGCCGCAGGGCACCCTGGAGAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341823 23 - 90373283 CCGCCGCAGGGCACCCTGGAGAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142749 23 - 179258 CCGCCGCAGGGCACCCTGGAGAT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97216 23 + 372756 CAGCCGCAGGGCGCCCTCAGGAT i calJac3.chrUn_GL286459 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47648042 1388 + 47698779 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2733151 12 + 11732439 I e otoGar3.GL873542 22899066 25 + 22939663 I a score=170032.000000 s hg38.chr20_KI270870v1_alt 164041 24 + 183433 GCGGAACGCCCCCAGCCGTGGGTC s panTro5.chr20 66499462 24 + 66533130 GCGGAACGCCCCCAGCCGTGGGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166921 24 + 62195757 GCGGAACGCCCCCAGCCGTGGGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553104 24 - 578057 GCGGAACGCCCGCAGCCGTGGGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074510 24 - 110113093 GCGGAACGCCCCCAGCCGTGGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814466 24 - 92844088 GCGAAACGCCCCCAGCCGTGGGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96479991 24 + 96509753 GCGAAACGCCCCCAGCCGTGGGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950061 24 - 16982598 GCGAAACGCCCCCAGCCGTGGGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752051 24 - 3785965 GCGAAACGCCCCCAGCCGTGGGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341846 24 - 90373283 GCGGAACGCCCCCAGCCGTGGGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142772 24 - 179258 GCGAAACGCCCCCAGCCGTGGGTC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97239 24 + 372756 GCGGAACGCCCCCAGCGGTGGGTC i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2733163 24 + 11732439 GCGGGACGCCCCCAGCCGCGGGTC i aotNan1.NW_018500483v1 I 12 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47648042 1388 + 47698779 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e otoGar3.GL873542 22899066 25 + 22939663 I a score=215432.000000 s hg38.chr20_KI270870v1_alt 164065 32 + 183433 AGCAAAGGCGTCTCAGGTGACCCTTAGGGAGG s panTro5.chr20 66499486 32 + 66533130 AGCAAAGGCGTCTCAGGTGACCCTCAGGGAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166945 32 + 62195757 AGCAAAGGCGTCTCAGGTGACCCTCAGGGAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553128 32 - 578057 AGCAAGGGCGTCTCAGGTGACCCTCAGGGACG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074534 32 - 110113093 AGCAAAGGCGTCTCAGGTGACCCTCAGGGAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814490 32 - 92844088 AGCAAGGGCGTCTCAGGTGACCCTCAGGGAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480015 32 + 96509753 AGCAAGGGCGTCTCAGGTGACCCTCAGGGAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950085 32 - 16982598 AGCAAGGGCGTCTCAGGTGACCCTCAGGGAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752075 32 - 3785965 AGCAAGGGCGTCTCAGGTGACCCTCAGGGAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341870 32 - 90373283 AGCAAAGGCGTCTCAGGTGACCCTCAGGGAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142796 32 - 179258 AGCAAGGGCGTCTCAGGTGACCCTCAGGGAGC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97263 32 + 372756 GGCAGCGGCGGCTCAGGTAACCCTCGGGGAGG i calJac3.chrUn_GL286459 C 0 C 0 s aotNan1.NW_018500483v1 2733187 32 + 11732439 GGCAGCGGCGGCTCAGGTAACCCTCGGGGAGG i aotNan1.NW_018500483v1 C 0 I 82 s otoGar3.GL873542 22899091 30 + 22939663 AGCAGAGACG--TCGGGTGGCATCCGGGGCGT i otoGar3.GL873542 I 25 I 1 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47648042 1388 + 47698779 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I a score=583799.000000 s hg38.chr20_KI270870v1_alt 164097 113 + 183433 GCTTCTGAGGCAGCCCGTGCGGGGTC----CGTCCT---GGCTGAGCACTGCGCGGACGGCGCGCCCGCGAGACTCGGACCCGGCCTAGGGCTCAGCGAGCTCTCAGCGGGGCGGGC-------GGA s panTro5.chr20 66499518 113 + 66533130 GCTTCTGAGGCAGCCTGTGCGGGCTC----CGTCCT---GGCTGAGCACTGCGCGGACGGCGCGCCCACGAGACTCGGACCCGGCCTAGGGCTCAGCGAGCTCTCAGCGGGGCGGGC-------GGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62166977 113 + 62195757 GCTTCTGAGGCAGCCTGTGCGGGCTC----CGTCCT---GGCTGGGCACTGCGCGGACGGCGAGCCCACGAGACTCGGACCCGGCCTAGGGCTCAGCGAGCTCTCAGCGGGGCGGGC-------GGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553160 113 - 578057 GCTTCTGAGGCAGCCTCTGCGGGGTC----CGTCCT---GGCTGAGCACTGCGCGGACGGCGCGCCCACGAGACTTGGACCCGGCCTAGGGCTCAGCGAGCTCTCAGCGGGGCGGGC-------GGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074566 113 - 110113093 GCTTCTGAGGCAGCCTGTGCGGGGTC----CGTCCT---GGCTGAGCAATGCGCGGACGGCGGGCCCACGAGACTCGGACCCGGCCTAGGGCTCAGCGAGCTCTCAGCGAGGCCGGC-------AGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814522 102 - 92844088 GCTTCTCAGGCAGCCTGTGCGGGGTC----CGTCCT---GGCTGAGCACTGCGCGGACGGCGCGCCCACGAGACTCGGACCCGGCCTAGGGCTCA-----------GTGGGGCGGGC-------GGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480047 102 + 96509753 GCTTCTCAGGCAGCCTGTGCGGGGTC----CGTCCT---GGCTGAGCACTGCGCGGACGGCGCGCCCACGAGACTCGGACCCGGCCTAGGGCTCA-----------GTGGGGCGGGC-------GGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950117 102 - 16982598 GCTTCTCAGGCAGCCTGTGCGGGGTC----CGTCCT---GGCTGAGCACTGCGCGGACGGCGCGCCCACGAGACTCGGACCCGGCCTAGGGCTCA-----------GTGGGGCGGGC-------GGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752107 102 - 3785965 GCTTCTCAGGCAGCCTGTGCGGGGTC----CGTCCT---GGCTGAGCACTGCGCGGACGGCGCGCCCACGAGACTCGGACCCGGCCTAGGGCTCA-----------GCGGGGCGGGC-------GGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90341902 113 - 90373283 GCTTCTCGGGCAGCCTGTGCGGGGTC----CGTCCT---GGCTGAGCACCGCGCGGACGGCGCGCCCACGAGACTCGGACCCGGCCTACGGCTCAGCGAGCGCTCGGCGGGGCGGGC-------GGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142828 102 - 179258 GCTTCTCAGGCAGCCTGTGCGGGGTC----CGTCCT---GGCTGAGCACTGCGCGGACGGCGCGCCCACGAGACTCGGACCCGGCCTAGGGCTCA-----------GCGGGGCGGGC-------GGA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97295 103 + 372756 -CTTCTCAGGTAGCCTCGGCGAG-TC----GGTCCTCCAGGCTGAGCACTGCGCGGACGGCGCGCCCACGAGACTCAGACACGGCCGAGGGCCCA-----------GGGGGGCGGGC-------GGA i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22899122 105 + 22939663 ACTTCCGAG--AGGCAGCGCGGCTTCTCCACCTTCT---GGCCGTGCTCTGCGCCTACAGCGCGCGCGCGCGA---------GGGCTGGGACTCCGAC--------GTTGGGGAAGCCATCACAGGA i otoGar3.GL873542 I 1 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47648042 1388 + 47698779 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2733219 82 + 11732439 I a score=103055.000000 s hg38.chr20_KI270870v1_alt 164210 19 + 183433 C--GCAGGCAGCCCAGGGGAG s panTro5.chr20 66499631 19 + 66533130 C--GCAGGCAGCCCAGGGGAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167090 19 + 62195757 C--GCAGGCAGCCCAGGGGAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553273 19 - 578057 C--GCAGGCAGCCCAGAGGAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074679 19 - 110113093 C--GCACGCAGCTCAGGATAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814624 19 - 92844088 C--GCGGGCAGCCCACGGGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480149 19 + 96509753 C--GCGGGCAGCCCACGGGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950219 19 - 16982598 C--GCGGGCAGCCCACGGGAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752209 19 - 3785965 C--GCGGGCAGCCCGCGGGAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342015 19 - 90373283 C--GCGGGCAGCTCACGGGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142930 19 - 179258 C--GCGGGCAGCCCACGGGAC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97398 19 + 372756 C--ACCGGCAGCCCAGAGGAG i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22899227 21 + 22939663 CTGGAAGGCTGCCAGGAGGGG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47649430 19 + 47698779 c--gcggaccgcccgcgagga i canFam3.chr24 I 1388 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e dasNov3.JH569290 312915 4540 - 397369 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2733219 82 + 11732439 I a score=9840.000000 s hg38.chr20_KI270870v1_alt 164229 2 + 183433 TG s panTro5.chr20 66499650 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167109 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553292 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074698 2 - 110113093 TG i nomLeu3.chr13 C 0 M 100 s rheMac8.chr10 92814643 2 - 92844088 TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480168 2 + 96509753 TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950238 2 - 16982598 TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752228 2 - 3785965 TG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342034 2 - 90373283 CG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142949 2 - 179258 TG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97417 2 + 372756 CG i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22899248 2 + 22939663 TC i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47649449 2 + 47698779 cc i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 317455 2 - 397369 TG i dasNov3.JH569290 I 4540 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2733219 82 + 11732439 I a score=18200.000000 s hg38.chr20_KI270870v1_alt 164231 2 + 183433 GG s panTro5.chr20 66499652 2 + 66533130 GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167111 2 + 62195757 GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553294 2 - 578057 GG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92814645 2 - 92844088 GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480170 2 + 96509753 GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950240 2 - 16982598 GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752230 2 - 3785965 GG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342036 2 - 90373283 GG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142951 2 - 179258 GG i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97419 2 + 372756 GG i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22899250 2 + 22939663 GG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47649457 2 + 47698779 gg i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 317457 2 - 397369 GG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2733219 82 + 11732439 I e nomLeu3.chr13 110074700 100 - 110113093 M a score=38235.000000 s hg38.chr20_KI270870v1_alt 164233 6 + 183433 GCCCGC s panTro5.chr20 66499654 6 + 66533130 GGCCGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167113 6 + 62195757 GCCCGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553296 6 - 578057 GCCCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074800 6 - 110113093 GCCCGC i nomLeu3.chr13 M 100 C 0 s rheMac8.chr10 92814647 6 - 92844088 GCCCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480172 6 + 96509753 GCCCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950242 6 - 16982598 GCCCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752232 6 - 3785965 GCCCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342038 6 - 90373283 GCCCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142953 6 - 179258 CCCCTC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97421 6 + 372756 GCCCTC i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22899252 6 + 22939663 GCCCAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47649459 6 + 47698779 gcccac i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 317459 6 - 397369 GCCCAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1201767 440 + 1231380 I e aotNan1.NW_018500483v1 2733219 82 + 11732439 I a score=16383.000000 s hg38.chr20_KI270870v1_alt 164239 3 + 183433 CCT- s panTro5.chr20 66499660 3 + 66533130 CCT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167119 3 + 62195757 CCT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553302 3 - 578057 CCT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074806 3 - 110113093 CCT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814653 3 - 92844088 CCT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480178 3 + 96509753 CCT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950248 3 - 16982598 CCT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752238 3 - 3785965 CCT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342044 3 - 90373283 CCT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142959 3 - 179258 CCT- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97427 3 + 372756 CCT- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202207 3 + 1231380 CCT- i cebCap1.NW_016107870v1 I 440 C 0 s otoGar3.GL873542 22899258 3 + 22939663 CCG- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47649465 2 + 47698779 -cg- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 317465 3 - 397369 -CAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e saiBol1.JH378156 16330038 1917 + 16356641 I e aotNan1.NW_018500483v1 2733219 82 + 11732439 I a score=36484.000000 s hg38.chr20_KI270870v1_alt 164242 5 + 183433 GCGCC s panTro5.chr20 66499663 5 + 66533130 GCACC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167122 5 + 62195757 GCGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553305 5 - 578057 GCGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074809 5 - 110113093 GCGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814656 5 - 92844088 GCGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480181 5 + 96509753 GCGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950251 5 - 16982598 GCGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752241 5 - 3785965 CCGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342047 5 - 90373283 GCGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142962 5 - 179258 GCGTC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97430 5 + 372756 GCGCC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202210 5 + 1231380 GCGCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2733301 5 + 11732439 GCGCC i aotNan1.NW_018500483v1 I 82 C 0 s otoGar3.GL873542 22899261 5 + 22939663 GAGGC i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 317468 5 - 397369 GAGGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47649467 0 + 47698779 C e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181834400 3412 + 182113224 I e micMur3.chr18 56912451 5688 + 57149010 I e saiBol1.JH378156 16330038 1917 + 16356641 I a score=79596.000000 s hg38.chr20_KI270870v1_alt 164247 7 + 183433 GCCATCA s panTro5.chr20 66499668 7 + 66533130 GCCATCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167127 7 + 62195757 GCCATCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553310 7 - 578057 GCCATCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074814 7 - 110113093 GCCATCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814661 7 - 92844088 GCCATCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480186 7 + 96509753 GCCATCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950256 7 - 16982598 GCCATCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752246 7 - 3785965 GCCATCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342052 7 - 90373283 GCCATCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142967 7 - 179258 GCCATCA i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97435 7 + 372756 GCCATCG i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202215 7 + 1231380 GCCGTCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2733306 7 + 11732439 GCCATCG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22899266 7 + 22939663 GCCGTTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181837812 7 + 182113224 GCCGTTG i mm10.chr2 I 3412 C 0 s canFam3.chr24 47649467 7 + 47698779 gccgTTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 317473 7 - 397369 GCCATTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e micMur3.chr18 56912451 5688 + 57149010 I e saiBol1.JH378156 16330038 1917 + 16356641 I a score=394697.000000 s hg38.chr20_KI270870v1_alt 164254 37 + 183433 CCCCTTTAAGTGC-CAGGCCCGCGGCGCATGCGCAGT----C s panTro5.chr20 66499675 37 + 66533130 CCCCTTTAAGGGC-CAGGCCCGCGGCGCATGCGCAGT----C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167134 37 + 62195757 CCCCTTTAAGCGC-CAGGCCCGCGGCGCATGCGCAGT----C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553317 36 - 578057 CCCCTTTAag-gc-caggcccgcggcgcatgcgcagt----c i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074821 37 - 110113093 CCCCTTTAAGTGC-CAGGCCCGCGGCGCATGCGCAAT----C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814668 37 - 92844088 CCCCTTTAAGTTC-CAGGCCCgcggcgcatgcgcagt----c i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480193 37 + 96509753 CCCCTTTAAGTTC-CAGCCCCGCGGCGCATGCGCAGT----C i macFas5.chr10 C 0 M 350 s macNem1.NW_012014244v1 16950263 37 - 16982598 CCCCTTTAAGGTC-CAGGCCCGTGGCGCATGCGCAGT----C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752253 37 - 3785965 CCGCTTTAAGGTC-CACGCCcgcggcgcatgcgcagt----c i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342059 37 - 90373283 CCCCTTGACGTGC-CAGGCCcgcggcgcatgcgcagc----c i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 142974 37 - 179258 CCGCTTTAAGTTC-CAGGCCcgcggcgcatgcgcagt----c i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97442 37 + 372756 CCCCGTTAAACCT-CAGGCCCGTGGCGCACGCGCAGT----C i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202222 41 + 1231380 CCCCCTTAAGCGG-CGGGCCCGCGGCGCACGCGCAGTCAGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2733313 36 + 11732439 CCCCTTTAAGC-G-CAGGCCCGCGGCGCACGCGCAGT----C i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56918139 37 + 57149010 CCCCTTTAAGCGC-CAGACCcgcagcgcacgcgcagt----c i micMur3.chr18 I 5688 C 0 s otoGar3.GL873542 22899273 37 + 22939663 CCCTTTTAAGCGT-CAGGCCTGGGGCGCACGCGCAGT----C i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181837819 38 + 182113224 CCCCTTTAAGAGTGTCCTCCAACCGCACATGCTCAGT----T i mm10.chr2 C 0 I 6 s canFam3.chr24 47649474 36 + 47698779 CCCCTTTAAGCGC-CAGGCC-GGGACGCACGCGCAGT----C i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 317480 31 - 397369 CCCCTTTAAGAGC-CGGT------GCGCACGCGCAGT----C i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e saiBol1.JH378156 16330038 1917 + 16356641 I a score=173850.000000 s hg38.chr20_KI270870v1_alt 164291 31 + 183433 AGGCCGTTG--TGCGCAG--GCGCAGAggcggcgg s panTro5.chr20 66499712 23 + 66533130 AGGCCGTTG--TGCGCAg--gcgcaga-------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167171 28 + 62195757 AGGCCGTGG--TGCGCAg--gcgcaga---ggcgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553353 25 - 578057 aggccgttg--tgcgcag--gcgcaga------gg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074858 23 - 110113093 GGGCCGTTG--TGCGCAG--GCGCAGA-------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814705 25 - 92844088 -gggcgt----ggcgcag--gcgcaga---ggcgg i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950300 31 - 16982598 AGGCCGTTG--TGCGCAG--GCGCAGAggcggcgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752290 28 - 3785965 aggccgttg--tgcgcag--gcgcaga---ggcgg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342096 28 - 90373283 aggccgttg--tgcgcag--gcgcagg---ggcgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143011 23 - 179258 aggccgttg--tgcgcag--gcgcaga-------- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97479 23 + 372756 CGGCCGTTG--TGCGCAG--GCGCATA-------- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202263 21 + 1231380 CGGCCGTCG--TGCGCAG--GCGCA---------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2733349 31 + 11732439 CGGCCGTTG--TGCGCAG--GCGCAGAGGCGGCGG i aotNan1.NW_018500483v1 C 0 I 705 s micMur3.chr18 56918176 27 + 57149010 aggccgttgggcgcgcag--gcgcaggcg------ i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22899310 33 + 22939663 GGGCCGTTGCACACGCAG--GCGCAGACGCGGCGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181837863 27 + 182113224 GAGCC------CGCGCAC--GCGCAGAGGTAGCAG i mm10.chr2 I 6 C 0 s canFam3.chr24 47649510 27 + 47698779 GGGCCGTTG--CGCGCAGCTGCGCAGTGG------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 317511 30 - 397369 GGGCGGTTGCGCGCGCAG--GCGCAGT---GGCGG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e colAng1.NW_012114444v1 5612076 550 - 5823884 M e saiBol1.JH378156 16330038 1917 + 16356641 I e macFas5.chr10 96480230 350 + 96509753 M a score=35088.000000 s hg38.chr20_KI270870v1_alt 164322 9 + 183433 cggcggcgg s panTro5.chr20 66499735 8 + 66533130 -ggcggcgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167199 9 + 62195757 cggcggcgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553378 9 - 578057 cggcggcgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074881 5 - 110113093 ----GGCGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814730 9 - 92844088 cggcggcgg i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950331 9 - 16982598 cggcggcgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752318 9 - 3785965 cggcggcgg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342124 9 - 90373283 cggcggcgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143034 8 - 179258 -ggcggcgg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97502 5 + 372756 ----GGCGG i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202284 4 + 1231380 -----GAGG i cebCap1.NW_016107870v1 C 0 C 0 s otoGar3.GL873542 22899343 3 + 22939663 ------CGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181837890 3 + 182113224 ------CGG i mm10.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1903041 5487 - 2029793 I e canFam3.chr24 47649537 0 + 47698779 C e colAng1.NW_012114444v1 5612076 550 - 5823884 M e micMur3.chr18 56918203 0 + 57149010 C e dasNov3.JH569290 317541 0 - 397369 C e saiBol1.JH378156 16330038 1917 + 16356641 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I e macFas5.chr10 96480230 350 + 96509753 M a score=366865.000000 s hg38.chr20_KI270870v1_alt 164331 45 + 183433 cggcggcggATGTTTACGGCGGCCGAGGTTGGAGCGGCGCTG-CTC s panTro5.chr20 66499743 45 + 66533130 cggcggcggatgtttacggcggccgaggttggagcggcgctg-ctc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167208 45 + 62195757 cggcggcggATGTTTACGGCGGCCGAGGTTGGAGCGGCGCTG-CTC i panPan2.chr20 C 0 M 259 s gorGor5.CYUI01015848v1 553387 45 - 578057 cggcggcggATGTTTACGGCGGCCTAGGTTGGAGCGGCGCTG-CTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074886 45 - 110113093 CGGCGGCGGATGTTTACGGCGGCCGAGGTTGGAGCGGCGCTG-CTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814739 45 - 92844088 cggcggcggatg-ttacggcggccgaggttggagcggcgctgcccc i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950340 45 - 16982598 cggcggcggATGTTTACGGCGGCCGAGGTTGGAGCGGCGCTG-CCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752327 45 - 3785965 cggcggcggatgtttacggcggccgaggttggagcggcgctg-ccg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342133 45 - 90373283 cggcggcggatgtttacggcggccgaggttggagcggcgctg-ccg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143042 45 - 179258 cggcggcggatgtttacggcggccgaggttggagcggcgctg-ccg i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97507 45 + 372756 CGGCGGCGGATGTTTACGGTGGCCGAGGTTGGAGCGGCGTAC-CCG i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202288 45 + 1231380 CGGCGGCGGATGTTTACGGCGGCCGAGGGCGGAGCGGCGCGC-CCG i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56918203 45 + 57149010 cggcgGCGGATGTTTACAGCGGCGGAGGTCGGCGCGGCGCCC-CCG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1908528 45 - 2029793 cggcgGCGGATGTTTACAGCGGCGGAGGTCGGCGCGGCGCCC-CCG i proCoq1.NW_012150197v1 I 5487 C 0 s otoGar3.GL873542 22899346 35 + 22939663 ---------ATGTTTACAGCAGCTAAGGTCGGAGCGGCG-CA-CCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181837893 22 + 182113224 ---------ATGTTTACAGCGGCTGAGGTCC--------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47649537 35 + 47698779 -GGCGGCGGATGTTTACGGCGGCGGCGGTCGGGGCG---------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 317541 33 - 397369 ----GACGGGTGTTTACGG--GCCGCGGACTCGGGTGCG------- i dasNov3.JH569290 C 0 C 0 e colAng1.NW_012114444v1 5612076 550 - 5823884 M e saiBol1.JH378156 16330038 1917 + 16356641 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I e macFas5.chr10 96480230 350 + 96509753 M a score=916789.000000 s hg38.chr20_KI270870v1_alt 164376 134 + 183433 GGCCGCGGACACACGA-GGGACGCGCCCGAGGAGCTGCAGGTGGCAGCCCAGGCGGTCCGAACCCGTCGGCCGGCCGAGCCTGGAGGTAGA------gccgccgccgccgccgccgcc--------CCTC-GGTCCGGCCTGCGGCGAGC s panTro5.chr20 66499788 134 + 66533130 ggccgcggACACACGA-GGGACGCGCCCGAGGAGCTGCAGGTGGCAGCCCAGGCGGTCCGAACCCGTCGGCCGGCCGAGCCTGGAGGTAGA------gccgccgccgccgccgccgcc--------CTTC-GGTCCGGCCTGCGGCGAGC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553432 134 - 578057 GGCCGCGGACACACGA-GGGACGCGCTCGAGGAGCTGCAGGTGGCAGCCCAGGCGGTCCGAACCCGTCGGCCGGCCGAGCCTGGAGGTAGA------gccgccgccgccgccgccgcc--------CCTC-GGTCCGGCCTGCGGCGAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110074931 131 - 110113093 GGCCGCGGACACACGA-GGGACGCGCCCGAGGAGCTGCAGGTCGCAGCCCAGGCGGTCCGAACCCGTCGGCCGGCCGAGCCTGGAGGTAGA---------gccgccgccgccgccgcc--------cctc-ggccCGGCCTGCGGCGAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814784 126 - 92844088 ggcagcggACGCACGA-GGGACG---CCGAGGAGCTGCAGGTCGCAGCTCAGGCGGTCCGAACCCGTCG--CGGCCGAGCCTGGAGGTAGA------GCCGCCG----------CGCCGCCCGCGTCCGT-GGTCCGG-CTGCGGCGAGC i rheMac8.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950385 142 - 16982598 GGCAGCGGACGCACGA-GGGACGCGCCCGAGGAGCTGCAGGTCGCAGCTCAGGCGGTCCGAACCCGTCGGCCGGCCGAGCCTGGAGGTAGA------gccgccgccgccgccgccgccgtcccccccCTC-GGTCCGGCCTGCGGCGAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752372 142 - 3785965 ggcagcggACGCACGA-GGGACGCGCCCGAGGAGCTGCAGGTCGCAGCCCAGGCGGTCCGAACCCGTCGGCCGGCCGAGCCTGGAGGTAGA------gccgccgccgccgccgccgccgtcccccccCTC-GGTCCGGCCTGCGGCGAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342178 148 - 90373283 ggcagcggACGCACGA-GGGACGCGCCCGAGGAGCTGCAGGTCGCAGCCCAGGCGGTCCGAACCCGTCGGCCGGCCGAGCCTGGAGGTAGAgccgccgccgccgccgccgccgccgccgTCCCCCCCCTC-GGTCCGGCCTGCGGCGAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143087 142 - 179258 ggcagcggACGCACGA-GGGACGCGCCCGAGGAGCTGCAGGTCGCAGCCCAGGCGGTCCGAACCCGTCGGCCGGCCGAGCCTGGAGGTAGA------gccgccgccgccgccgccgccgtcccccccCTC-GGTCCGGCCTGCGGCGAGC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97552 129 + 372756 GGGCTCGTACATACTCTTGGACGCGCCAGAGGAGCTGCATGTCGCAGCCCTTTCATTCTGAACCCGTCTGTCTGCCGAGCCTGTAGGTAGA------TTCGCCTTCGCCGCC--------------TCTC-TGCCCGGCCTGCGGCGAGC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202333 126 + 1231380 GGGCGCGGACGCAGCA--GGACGC-CCCGAGGAGCCGCAGGTCGCAGCCCGGGCGGTCCGAACGCGCCGACCCGCCGAGCCTGGAGGTAGA------GCCGCTGCCGCCGCC--------------CCTC-GGCCCGGCCTGCGGCGAGC i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56918248 131 + 57149010 GGACGAGGACGCGCGA-GGGACGCGCCCGAAGAGCTGCAGGTCGCTGCCCAGGCCGCCCGAACCGGCGGGCCGGCCGAGCCCCGAGGTACA------GCCGCCGCCGCCGCCTCC-----------CCTC-GGCCCGGCCTGCGGCGGGC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1908573 131 - 2029793 GGACGAGGACGCGCGA-GGGACGCGCCCGAGGAGCTGCCGGTCGCTGCCCAGGCGGCCCGAACCCGCGGGCCGGCCGAGCCCCGAGGTACA------ACCGCCGCCGCTGCCGCC-----------CCTC-GGCCCGGCCTGCGGCGGGC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22899381 113 + 22939663 GGCTGCGGACGAGCTG-GGGACCAGCTCGAGGACCTG------------CAAGCGGCACGAGCTCGCGGGCTGGCCGAGCCTGGAGGTAGA------GACACCGTCG------CC-----------CCTC-GGCCCTGCCTACGGCGGGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181837915 86 + 182113224 GTCCGAAG-----CGA-CAGAAGCGTCTGAAGAACTGCTCTCCGAGACTC----------AATACGGGGGCT-GCTGAGCGCCGAGGTAGA------GCCGTCTCTGCC----------------------------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47649572 113 + 47698779 ----GCGGACGGGCGA-GGGGCG---CCGAGGAGCTGCAGGTCGCGGC-CGGGCGGCCCGGTCTCG-----CGGCCCAGCCCGGAGGTAGA------gccgccgccgccgg---------------cctc-gacccggcctgcgg-gggc i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 317574 127 - 397369 GACGGCGGACGGGCG--GGGAGGCGCCCGAGGAGCTCCAGGTCGCGGTCCCGGCGGCCGGATCCCGCGGGCC-GCGGAGCCCGGAGGTAGA------GCCGCTGCCGCCTCT--------------CCTCGGGCCCAGCCTGTGGCCGGC i dasNov3.JH569290 C 0 C 0 e colAng1.NW_012114444v1 5612076 550 - 5823884 M e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I e macFas5.chr10 96480230 350 + 96509753 M a score=29920.000000 s hg38.chr20_KI270870v1_alt 164510 3 + 183433 GGG- s panTro5.chr20 66499922 3 + 66533130 GGG- i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553566 3 - 578057 GGG- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075062 3 - 110113093 GGG- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814910 3 - 92844088 GGG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480580 3 + 96509753 GGG- i macFas5.chr10 M 350 C 0 s macNem1.NW_012014244v1 16950527 3 - 16982598 GGG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752514 3 - 3785965 GGG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342326 3 - 90373283 GGG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143229 3 - 179258 GGG- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97681 3 + 372756 GGG- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202459 3 + 1231380 GGG- i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56918379 3 + 57149010 GGG- i micMur3.chr18 C 0 I 218 s proCoq1.NW_012150197v1 1908704 3 - 2029793 GGG- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22899494 3 + 22939663 GGG- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47649685 2 + 47698779 -gg- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 317701 3 - 397369 -GGC i dasNov3.JH569290 C 0 C 0 e colAng1.NW_012114444v1 5612076 550 - 5823884 M e mm10.chr2 181838001 0 + 182113224 C e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=83472.000000 s hg38.chr20_KI270870v1_alt 164513 11 + 183433 TGGTGTGTCCC---- s panTro5.chr20 66499925 11 + 66533130 TGGTGTGTCCC---- i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553569 11 - 578057 TGGTGTGTCCC---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075065 11 - 110113093 TGGTGTGTCCC---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814913 11 - 92844088 CGGTGTGTCCC---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480583 11 + 96509753 CGGTGTGTCCC---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950530 11 - 16982598 CGGTGTGTCCC---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752517 11 - 3785965 CGGTGTGTCCC---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342329 11 - 90373283 CGGTGTGTCCC---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143232 11 - 179258 CGGTGTGTCCC---- i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97684 11 + 372756 CGGTGTGTCCC---- i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202462 11 + 1231380 CGGTGTGTCCC---- i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1908707 11 - 2029793 CGGTgtctccc---- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22899497 11 + 22939663 TGGTGTCGCCC---- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838001 1 + 182113224 ----------C---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47649687 11 + 47698779 cggcgTCTCCC---- i canFam3.chr24 C 0 I 127 s dasNov3.JH569290 317704 11 - 397369 ----GTCTCCGGTcc i dasNov3.JH569290 C 0 C 0 e colAng1.NW_012114444v1 5612076 550 - 5823884 M e micMur3.chr18 56918382 218 + 57149010 I e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=25976.000000 s hg38.chr20_KI270870v1_alt 164524 2 + 183433 CT s panTro5.chr20 66499936 2 + 66533130 CT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553580 2 - 578057 CT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075076 2 - 110113093 CT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814924 2 - 92844088 CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480594 2 + 96509753 CT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950541 2 - 16982598 CT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752528 2 - 3785965 CT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342340 2 - 90373283 CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143243 2 - 179258 CT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97695 2 + 372756 CT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1202473 2 + 1231380 CT i cebCap1.NW_016107870v1 C 0 I 3838 s proCoq1.NW_012150197v1 1908718 2 - 2029793 ct i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22899508 2 + 22939663 CT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838002 2 + 182113224 CT i mm10.chr2 C 0 C 0 s canFam3.chr24 47649825 2 + 47698779 CT i canFam3.chr24 I 127 C 0 s dasNov3.JH569290 317715 2 - 397369 ct i dasNov3.JH569290 C 0 C 0 e colAng1.NW_012114444v1 5612076 550 - 5823884 M e micMur3.chr18 56918382 218 + 57149010 I e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=34813.000000 s hg38.chr20_KI270870v1_alt 164526 4 + 183433 CGGC s panTro5.chr20 66499938 4 + 66533130 CGGC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553582 4 - 578057 CGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075078 4 - 110113093 CGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814926 4 - 92844088 CGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480596 4 + 96509753 CGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950543 4 - 16982598 CGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752530 4 - 3785965 CGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342342 4 - 90373283 CGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143245 4 - 179258 CGGC i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chrUn_GL286459 97697 4 + 372756 CGGC i calJac3.chrUn_GL286459 C 0 C 0 s proCoq1.NW_012150197v1 1908720 4 - 2029793 tggc i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22899510 4 + 22939663 TGGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838004 4 + 182113224 CGGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47649827 4 + 47698779 CCGC i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 317717 4 - 397369 cctc i dasNov3.JH569290 C 0 C 0 e colAng1.NW_012114444v1 5612076 550 - 5823884 M e micMur3.chr18 56918382 218 + 57149010 I e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=79432.000000 s hg38.chr20_KI270870v1_alt 164530 13 + 183433 CCCTTCCCTCCTC- s panTro5.chr20 66499942 13 + 66533130 CCCTTCCCTCCTC- i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553586 13 - 578057 CCCTTCCCTCCTC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075082 13 - 110113093 CCCTTCCCTCCTC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814930 13 - 92844088 CCCTTCCCTCCTC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480600 13 + 96509753 CCCTTCCCTCCTC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950547 13 - 16982598 CCCTTCCCTCCTC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752534 13 - 3785965 CCCTTCCCTCCTC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342346 10 - 90373283 CCCTTC---CCTC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143249 13 - 179258 CCCTTCCCTCCTC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5612647 13 - 5823884 CCCTTCCCTCCTC- i colAng1.NW_012114444v1 M 550 C 0 s calJac3.chrUn_GL286459 97701 11 + 372756 CCCTTCCCTCC--- i calJac3.chrUn_GL286459 C 0 C 0 s proCoq1.NW_012150197v1 1908724 13 - 2029793 cgcgtccctcctc- i proCoq1.NW_012150197v1 C 0 I 88 s otoGar3.GL873542 22899514 12 + 22939663 CTCATCCCTCTC-- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838008 12 + 182113224 -CCTTCCCTCCAT- i mm10.chr2 C 0 I 4 s canFam3.chr24 47649833 11 + 47698779 GCTGTCTCTCT--- i canFam3.chr24 I 2 I 4 s dasNov3.JH569290 317721 14 - 397369 cgctccccggcccc i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56918382 218 + 57149010 I e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=535725.000000 s hg38.chr20_KI270870v1_alt 164543 116 + 183433 -CTTCCCCAC--------CCCCG-------GCACCCCTGCGCCCGGAGCTCT-----CCTCTGG-------------------------------------------------GGGCGTCGCTCCTCCC------CACCTCGGG-CACCCTCACCTCCCCCCAG---------CGGCCTCCAGGGCGTCCCGCGTTTCTCTC s panTro5.chr20 66499955 116 + 66533130 -CTTCCCCAC--------CCTCG-------GCACCCCTGCGCCCGGAGCGCT-----CCTCTGG-------------------------------------------------GGGCGTCGCTCCTCCC------CACCTCGGG-CACCCTCACCTCCCCCCAG---------CGGCCTCCAGGGCGCCCCGCGTTTCTCTC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553599 116 - 578057 -CTCCCCCAC--------CCCCG-------GCACCCCTGCGCCCGGAGCGCT-----CCTCTGG-------------------------------------------------GGGCGTCGCTCCTCCC------CACCTCGGG-CACACTCACCTCCCCCCAG---------CGGCCTCCAGGGCGCCCCGCGTTTCTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075095 116 - 110113093 -CTCCCCCAC--------CCCCG-------GCACCCCTGCGCCCGGAGCGCT-----CCTCTGG-------------------------------------------------GGGCCTCGCTCCTCCC------CACCTCGGG-CACCCTCACCTCCCCCCAG---------CGGCCTCCAGGGCGTCCCGCGTTTCTCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92814943 112 - 92844088 -CTCCCCCAC--------CCCCG-------GCACCCCTGCGCCCGGAGCGCT-----CCTCTGG-------------------------------------------------GGGCCTCGCTTCTCCC------CACCTCGGG-CACCCTCGCTTCCCTCCAG---------CGGCCCCCAGGGCGCCCCGCGTT----TC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480613 112 + 96509753 -CTCCCCCAC--------CCCCG-------GCACCCCTGCGCCCGGAGCGCT-----CCTCTGG-------------------------------------------------GGGCCTCGCTTCTCCC------CACCTCGGG-CACCCTCGCTTCCCTCCAG---------CGGCCCCCAGGGCGCCCCGCGTT----TC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950560 112 - 16982598 -CTCCCCCAC--------CCCCG-------GCACCCCTGCGCCCGGAGCGCT-----CCTCTGG-------------------------------------------------GGGCCTCGCTTCTCCC------CACCTCGGG-CACCCTCGCTTCCCTCCAG---------CGGCCCCCAGGGCGCCCCGCGTT----TC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752547 112 - 3785965 -CTCCCCCAC--------CCCCG-------GCACCCCTGCGCCCGGAGCGCT-----CCTCTGG-------------------------------------------------GGGCCTCGCTTCTCCC------CACCTCGGG-CACCCTCGCTTCCCTCCAG---------CGGCCCCCAGGGCGCCCCGCGTT----TC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342356 112 - 90373283 -CTCCCCCAC--------CCCCG-------GCACCCCTGCGCCCGGAGCGCT-----CCGCTGG-------------------------------------------------GGGCCTCGCTTCTCCC------CACCTCGGG-CACCCTCGCTTCCCTCCAG---------CGGCCCCCAGGGCGCCCCGCGTT----TC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143262 112 - 179258 -CTCCCCCAC--------CCCCG-------GCACCCCTGCGCCCGGAGCGCT-----CCTCTGG-------------------------------------------------GGGCCTCGCTTCTCCC------CACCTCGGG-CACCCTCGCTTCCCTGCAG---------CGGCCCCCAGGGCGCCCCGCGTT----TC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5612660 116 - 5823884 -TTCCCCCAC--------CCCTG-------GCACCCCTGCGCTCGGAGCGCC-----CCTCTGG-------------------------------------------------GGGCCTCGCTCCTCCC------CACCTCGGG-CACCCTCGCTTCCCCCCAG---------CGGCCCCCAGGGCGCCCCGCCTTTCTCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 97712 111 + 372756 ----CCCTAC--------ACCCG-------GCAGCCCTGTCCCCGGAGCGGT-----CCTCTGG-------------------------------------------------GGGCCTCGCTCCTCCC------CACCTCGGGACACCCTCA---CCCCCCAG---------CGGACCCCGGGGCGACCCGCGTTTCTCTC i calJac3.chrUn_GL286459 C 0 C 0 s otoGar3.GL873542 22899526 79 + 22939663 -------------------------------GATCTCCTCGCCAGG-----T-----CCTCCAA-------------------------------------------------GCCCTAGACTCACCCC------CGCCCCCTG-GGTCCCCGCCCTC---------------GGGTCCCC---GCGTCCGGCC-------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838024 117 + 182113224 -CTTCTCCAG--------CTCTGGTTACCCGTTCCCCAGCGTCCGTGTATCTTACCATCTCCGA-------------------------------------------------GAGTTTCGAACCCCAG------CGCCT--GT-CACCCCCGCCCCCCCATCT---------CCCTGCCCAGCACCTCCCTC--------- i mm10.chr2 I 4 C 0 s canFam3.chr24 47649848 89 + 47698779 -CTCCCCCAC-------TCCCCC-------TCCCCCCAACGCCTCGAGGTGT-----C---------------------------------------------------------GCTGTCCTCTGCTC------CGCCCCGGG---------GTTGTCCCCTG---------CGCCCCGGGGTTTGCCC------------ i canFam3.chr24 I 4 C 0 s dasNov3.JH569290 317735 187 - 397369 cctcccctccccggctctccccg-------gcctctccccgcccgg-cctct-----cctctcGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTCCCCCTCCCCGGCCGTCGTCTTAGC-CCCCGGGGCTTGTCTTCTGGTCTTGGCTGTGCTGCGAACGCGACCTGCTTGGCGTT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1908737 88 - 2029793 I e micMur3.chr18 56918382 218 + 57149010 I e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=843930.000000 s hg38.chr20_KI270870v1_alt 164659 126 + 183433 TCCGAGCGCTCGCGGTTTCCCGTCGG---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCTTTGACTTCCCAAGTGGGAAACGTTTGCAGTT-----CCA s panTro5.chr20 66500071 126 + 66533130 TCCGAGCGCTCGCGGTTTCCCGTCGG---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCTTTGACTTCCCAAGTGGGAAACGTTTGCAATT-----CCA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553715 126 - 578057 TCCGAGAGCTCGCGGTTTCCCGTCGG---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCTTTGACTTCCCAAGTGGGAAACGTTTGCAATT-----CCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075211 126 - 110113093 TCCGAGCGCTCGCGGTTTCCCGTCGG---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCCTTGATTTCCCAAGTGGGAAACGTTTGCAATT-----CCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815055 126 - 92844088 TCCGAGCGCTCGCGGTTTCCCTTCGG---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCCTTGATTTCCCAAGTGGGCAGCGTTTGCAATT-----CCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480725 126 + 96509753 TCCGAGCGCTCGCGGTTTCCCTTCGG---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCCTTGATTTCCCAAGTGGGCAACGTTTGCAATT-----CCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950672 126 - 16982598 TCCGAGCGCTCGCGGTTTCCCTTCGG---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCCTTGATTTCCCAAGTGGGCAACGTTTGCAATT-----CCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752659 126 - 3785965 TCCGAGCGCTCGCGGTTTCCCTTCGA---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCCTTGATTTCCCAAGTGGGCAACGTTTGCAATT-----CCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342468 126 - 90373283 TCCGAGCGCTCGCGGTTTCCCTTCGG---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCCTTGATTTCCCAAGTGGGCAACGTTTGCAATT-----CCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143374 126 - 179258 TCCGAGCGCTCGCGGTTTCCCTTCGG---TCTCTCCCGGTGCCCGTTGCTCAC---------------TCACACTCTTGGGTCTGGTTAGTCCAGACCTGCAGCTTGTCCTTGATTTCCCAAGTGGGCAACGTTTGCAATT-----CCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5612776 116 - 5823884 TCCGAGCGCTCGCGGTTTCCCTTCGG---TCTCTCCCGGTGCCCGTTG-------------------------CTCTTGGGTCTGGTGAGTCCAGACCTGCAGCTTGTCCTTGATTTCCCAAGTGGGCAACGTTTGCAATT-----CCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 97823 99 + 372756 TCCCAGCGCTCGCGGTTTCCCGGCGG---TCCCTCC-----------------------------------------TGGGTGTGCTTAGTCCAGACCTGCAGCTTGTCCTTGAGTCCTTAAGTGGGAAACGTTTGCAGTT------CA i calJac3.chrUn_GL286459 C 0 C 0 s proCoq1.NW_012150197v1 1908825 125 - 2029793 TCCGAGCGCTCGCGCTTTCCCGTCGG---TCTCTCCCGGCGCCCGTTG----C---------------TCACACCCTGGGATCTTCTTA-CCCAGACGTGCAGCTGGTCCCTGACTTACTAAGTAGGAGACGTTTGCGATTAGCG-CTA i proCoq1.NW_012150197v1 I 88 C 0 s otoGar3.GL873542 22899605 121 + 22939663 CCCGAGCGCT-GCGCTTTCCGGGCGG---TGTCTCCTGGCGCCCGTTG----C---------------TCACACTCCTGGGTTTTCTTAGCGCAAACCTGCGGCTCGTCCTTG----ACTAAGTGGGAAGCGTTTGCAGTTAATT-TTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838141 108 + 182113224 ------CCCTCCAGCGTGCCC--------CCCCACCCCCCGCCTGTTGCTAA---------------------TTCTGGGATCTGATTGCTCTAGTTCTACAACCTATTTCTAATT----AAGTAGGAAATGTTTGCAATTAGC--TCA i mm10.chr2 C 0 I 1 s canFam3.chr24 47649937 134 + 47698779 ----AGCAGCGGCGGGGCCTCCCGGGGTCTGTGTCCTGGTGCCCGGGGCTTACGCCATCCCGATCCGATCCCGATCCCGTGCTTGACTG---CGGACGTGCAGCCAGGCCCTAGCTCACGGAGCAGGAAG---GTGCGGGT-----CCG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 317922 112 - 397369 ----GGCGCCCGGCCCTTCCC----G---TGGCCCCCGGTGCCCGTTGCTCAC---------------GTCC-CTCCGTGCTC--------CCGAGCGCGCACCTGGTCCC-GGCCCACTGCGTGGGAGACGTTGGTAATTGGTTCTC- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56918382 218 + 57149010 I e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=407993.000000 s hg38.chr20_KI270870v1_alt 164785 47 + 183433 AGGCAAGCCAAGAGCTA---A---GGTTTAGAACAAAG----TCT---GCCTTGGAC--CCT s panTro5.chr20 66500197 47 + 66533130 AGGCAAGCCAAGAGCTA---A---GGTTTAGAACAAAG----TCT---GCCTTGGAC--CCT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553841 47 - 578057 AGGCAAGCCAAGAGCTA---A---GGTTTAGAACAAAG----TCT---GCCTTAGAC--CCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075337 47 - 110113093 AGGCAAGCCAAGAGCTA---A---GGTTTAGAACAAAG----TCT---GCCTTGGAC--CCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815181 47 - 92844088 AGGCAAGCCAAGAACTA---A---GGTTTAGAACAAAG----TCT---ACCTTGGAC--CCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480851 47 + 96509753 AGGCAAGCCAAGAACTA---A---GGTTTAGAACAAAG----TCT---ACCTTGGAC--CCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950798 47 - 16982598 AGGCAAGCCAAGAACTA---A---GGTTTAGAACAAAG----TCT---ACCTTGGAC--CCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752785 47 - 3785965 AGGCAAGCCAAGAACTA---A---GGTTTAGAACAAAG----TCT---ACCTTGGGC--CCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342594 47 - 90373283 AGGCAAGCCAAGAACTA---A---GGTTTAGAACAAAG----TCT---ACCTTGGAC--CCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143500 47 - 179258 AGGCAAGCCAAGAACTA---A---GGTTTAGAACAAAG----TCT---ACCTTGGGC--CCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5612892 47 - 5823884 AGGCAAGCCATGAGCTG---A---GGTTTAGAACAAAG----TCT---ACCTTGGAC--CCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 97922 51 + 372756 AGGCAAGCCGGGCACTG---C---GGTTTAGAACAAAGTATATAT---ACATTGGAC--CCT i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56918600 47 + 57149010 AGGCAAGTCAAGAGTTG---A---GGTTTAGGACAAAT----TCT---ACCTTGGAC--CTT i micMur3.chr18 I 218 C 0 s proCoq1.NW_012150197v1 1908950 47 - 2029793 AGGCAAGTCAAGAGTTA---A---GGTTCAGAACAAAT----TCT---ACCTTGGAC--CTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22899726 46 + 22939663 AGGCGAGGCAAGAGTTA---A---GGTTTAGAGCGAAT----TGT----CCTTTAGC--CTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838250 52 + 182113224 GGGCAAGTCGGGCATTGACCA---TGATTGAAACAAAT----TAT---ACCTAGGGTGGATA i mm10.chr2 I 1 C 0 s canFam3.chr24 47650071 44 + 47698779 -ggggcgcccgg--------g---ggctcagcgcgcgg----cctcccgccctggat--ctt i canFam3.chr24 C 0 I 212 s dasNov3.JH569290 318034 50 - 397369 CCGCAAGTCAAGAGTTA---ACATGGCTTAAAACAAAT----TCT---GTCTCGGAC--TTT i dasNov3.JH569290 C 0 C 0 e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=161600.000000 s hg38.chr20_KI270870v1_alt 164832 15 + 183433 TTCAGAAGATGACAG s panTro5.chr20 66500244 15 + 66533130 TTCAGAAGATGACAG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553888 15 - 578057 TTCAGAAGATGACAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075384 15 - 110113093 TTCAGAAGATGACAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815228 15 - 92844088 TTCAGAAGATGACAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480898 15 + 96509753 TTCAGAAGATGACAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950845 15 - 16982598 TTCAGAAGATGACAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752832 15 - 3785965 TTCAGAAGATGACAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342641 15 - 90373283 TTCAGAAGATGACAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143547 15 - 179258 TTCAGAAGATGACAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5612939 15 - 5823884 TTCAGAAGATGACAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 97973 15 + 372756 TTCAGAAGATGACAG i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56918647 15 + 57149010 TTCAGGAGGTGACAG i micMur3.chr18 C 0 I 49 s proCoq1.NW_012150197v1 1908997 15 - 2029793 TTCGGAAGATGACAG i proCoq1.NW_012150197v1 C 0 I 47 s otoGar3.GL873542 22899772 15 + 22939663 TTCAGGAGATGATAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838302 15 + 182113224 TTGGGAAGAAGGCAG i mm10.chr2 C 0 I 2 s dasNov3.JH569290 318084 15 - 397369 TTCAGAAGGTGACAG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47650115 212 + 47698779 I e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=-11964.000000 s hg38.chr20_KI270870v1_alt 164847 25 + 183433 ---------------------------------------------------GATTTTTTAAAAAAATAATTGC-----GCC s panTro5.chr20 66500259 25 + 66533130 ---------------------------------------------------GATTTTTAAAAAAAATAGTTGC-----Gcc i panTro5.chr20 C 0 I 12 s gorGor5.CYUI01015848v1 553903 25 - 578057 ---------------------------------------------------GATTTTTTAAAAAAATAGTTGC-----GCC i gorGor5.CYUI01015848v1 C 0 I 9 s nomLeu3.chr13 110075399 24 - 110113093 ---------------------------------------------------GATTTTT-AAAAAAATAGTTGC-----GCA i nomLeu3.chr13 C 0 I 7 s rheMac8.chr10 92815243 20 - 92844088 ---------------------------------------------------TTTTTTTTAAAA----AGTTGT-----CC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480913 20 + 96509753 ---------------------------------------------------TTTTTTTTAAAA----AGTTGT-----CC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950860 20 - 16982598 ---------------------------------------------------TTTTTTTTAAAA----AGTTGT-----CC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752847 20 - 3785965 ---------------------------------------------------TTTTTTTAAAAA----AGTTGT-----TC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342656 20 - 90373283 ---------------------------------------------------TTTTTTAAAAAA----AGTTGT-----CC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143562 20 - 179258 ---------------------------------------------------TTGTTTTAAAAG----AGTTGT-----TC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5612954 25 - 5823884 ---------------------------------------------------TTTTTTAAAAAA----AGTTGTCCCCCCC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 97988 23 + 372756 ---------------------------------------------------AATCTTTTAAAA-AATCGTTGC-----CC- i calJac3.chrUn_GL286459 C 0 I 1 s otoGar3.GL873542 22899787 18 + 22939663 -----------------------------------------------------TCTGTTAGAA----AGTTTC-----CA- i otoGar3.GL873542 C 0 I 23 s mm10.chr2 181838319 11 + 182113224 ---------------------------------------------------TATCCTACAGA------------------- i mm10.chr2 I 2 C 0 s dasNov3.JH569290 318099 71 - 397369 AAATCTGTGTGTGTGTGTGtatatatatatatatatataaataaatatatatatatataAAAT----AGTTGG-----CC- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909012 47 - 2029793 I e canFam3.chr24 47650115 212 + 47698779 I e micMur3.chr18 56918662 49 + 57149010 I e panPan2.chr20 62167253 259 + 62195757 M e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=168832.000000 s hg38.chr20_KI270870v1_alt 164872 25 + 183433 CCCCCGCCCCGTGCCTTGGAGATAG s panTro5.chr20 66500296 25 + 66533130 cccccgccccGTGCCTTGGAGATAG i panTro5.chr20 I 12 C 0 s panPan2.chr20 62167516 25 + 62195757 CCCCCGCCCCGTGCCTTGGAGATAG i panPan2.chr20 M 259 C 0 s gorGor5.CYUI01015848v1 553937 25 - 578057 CCCCCGCCCCGTGCCTTGGAGATAG i gorGor5.CYUI01015848v1 I 9 C 0 s nomLeu3.chr13 110075430 25 - 110113093 CGCCCGCACCGTGCTTTGGAGATAG i nomLeu3.chr13 I 7 C 0 s rheMac8.chr10 92815263 25 - 92844088 CCCCCGCCCCGTGCCTTGGAGATAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480933 25 + 96509753 CCCCCGCCCCGTGCCTTGGAGATAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950880 25 - 16982598 CCCCCGCCCCGTGCCTTGGAGATAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752867 25 - 3785965 CCCCCGCCCCGTGCCTTGGAGATAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342676 25 - 90373283 CCCCCGCCCCGTGCCTTGGAGATAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143582 25 - 179258 CCCCCGCCTCGTGCCTTGGACATAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5612979 25 - 5823884 CCCCCGCCCCGTGCCTTGGAGGTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98012 25 + 372756 CCGCCCCTGCGCGCCTTGGAGATAG i calJac3.chrUn_GL286459 I 1 C 0 s otoGar3.GL873542 22899828 25 + 22939663 CCCCCGCTGCGCGCCATTGAGGTGC i otoGar3.GL873542 I 23 C 0 s mm10.chr2 181838330 8 + 182113224 -----------------GGAGAAAA i mm10.chr2 C 0 C 0 s dasNov3.JH569290 318170 17 - 397369 CTCTCAAGCCTTGGTTT-------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909012 47 - 2029793 I e canFam3.chr24 47650115 212 + 47698779 I e micMur3.chr18 56918662 49 + 57149010 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=17719.000000 s hg38.chr20_KI270870v1_alt 164897 2 + 183433 TA s panTro5.chr20 66500321 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167541 2 + 62195757 TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553962 2 - 578057 TA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075455 2 - 110113093 TA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815288 2 - 92844088 TA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480958 2 + 96509753 TA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950905 2 - 16982598 TA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752892 2 - 3785965 TA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342701 2 - 90373283 TA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143607 2 - 179258 TA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613004 2 - 5823884 TA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98037 2 + 372756 TA i calJac3.chrUn_GL286459 C 0 C 0 s proCoq1.NW_012150197v1 1909059 2 - 2029793 TA i proCoq1.NW_012150197v1 I 47 C 0 s otoGar3.GL873542 22899853 2 + 22939663 TA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838338 1 + 182113224 -A i mm10.chr2 C 0 I 2 s dasNov3.JH569290 318187 2 - 397369 TG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47650115 212 + 47698779 I e micMur3.chr18 56918662 49 + 57149010 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=278396.000000 s hg38.chr20_KI270870v1_alt 164899 31 + 183433 AGAATTGGAGCAGAGCACTGGGACTTCAATT s panTro5.chr20 66500323 31 + 66533130 AGAATTGGAGCAGAGCACTGGGACTTCAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167543 31 + 62195757 AGAATTGGAGCAGAGCACTGGGACTTCAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553964 31 - 578057 AGAATTGGAGCAGAGCACTGGGACTTCAATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075457 31 - 110113093 AGAATTGGAGCAGAGCACGGGGACTTCAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815290 31 - 92844088 AGAATTGGAGCAGAGCTCTGGGACTTCCCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480960 31 + 96509753 AGAATTGGAGCAGAGCTCTGGGACTTCCCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950907 31 - 16982598 AGAATTGGAGCAGAGCTCTGGGACTTCCCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752894 31 - 3785965 AGAATTGGAGCAGAGCTCTGGGACTTCCCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342703 31 - 90373283 AGAATTGGAGCAGAGCTCTGGGACTTCCCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143609 31 - 179258 AGAATTGGAGCAGAGCTCTGGGACTTCCCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613006 31 - 5823884 AGAACTGGAGCAGAGCTCTGGGACTTCCATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98039 31 + 372756 AGACTTAGAGCAGAGCTCTAGGACCTCAATT i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56918711 31 + 57149010 AGAGTTGGAGCAGAGCGCTGGGACTTCAGTT i micMur3.chr18 I 49 C 0 s proCoq1.NW_012150197v1 1909061 31 - 2029793 AGAATTGGAGCAGAGCGTTGGGACTTAAATT i proCoq1.NW_012150197v1 C 0 I 95 s otoGar3.GL873542 22899855 30 + 22939663 GGAATTGGTG-AGAGCTCTGGTACTTAAATT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838341 3 + 182113224 AGA---------------------------- i mm10.chr2 I 2 C 0 s dasNov3.JH569290 318189 31 - 397369 GGAGTTGAAGCAGAGCGCTAGGGCTTAAATG i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47650115 212 + 47698779 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=166427.000000 s hg38.chr20_KI270870v1_alt 164930 21 + 183433 CACGCATG--GAAAGAGATCTTT s panTro5.chr20 66500354 21 + 66533130 CACGCATG--GAAAGAGATCTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167574 21 + 62195757 CACGCATG--GAAAGAGATCTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 553995 21 - 578057 CACGCATG--GAAAGAGATCTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075488 21 - 110113093 CACGCATG--GAAAGAGATCTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815321 21 - 92844088 CACGCATC--GAAAGAGATCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96480991 21 + 96509753 CACGCATC--GAAAGAGATCTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950938 21 - 16982598 CACGCATC--GAAAGAGATCTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752925 21 - 3785965 CACGCATC--GAAAGAGATCTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342734 21 - 90373283 CACGCATC--GAAAGAGATCTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143640 21 - 179258 CACGCATC--GAAAGAGATCTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613037 21 - 5823884 CACGCATC--GAAAGAGATCTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98070 21 + 372756 CACGCGTC--GAAAAAGGTCTTT i calJac3.chrUn_GL286459 C 0 C 0 s micMur3.chr18 56918742 22 + 57149010 CAGGCATGT-GGAAAAGATCTTT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22899885 22 + 22939663 AAGGCGCTT-GAAAAAGGCTTAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838344 21 + 182113224 CCCCTTTG--GGGAAAGATCTAA i mm10.chr2 C 0 C 0 s dasNov3.JH569290 318220 23 - 397369 AAGGCATGTAAAAAAAGGTCTTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909092 95 - 2029793 I e canFam3.chr24 47650115 212 + 47698779 I e saiBol1.JH378156 16330038 1917 + 16356641 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=142353.000000 s hg38.chr20_KI270870v1_alt 164951 21 + 183433 GTTAGTTGGAGGAAGGAGAAC s panTro5.chr20 66500375 21 + 66533130 GTTAGTTGGGGGAAGGAGAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167595 21 + 62195757 GTTAGTTGGAGGAAGGAGAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554016 21 - 578057 GTTAGTTGGAGGAAGGAGAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075509 21 - 110113093 GTTAGTTGGAGGAAGGAGAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815342 18 - 92844088 GTTAGTTGGAGGA---AGAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481012 18 + 96509753 GTTAGTTGGAGGA---AGAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950959 18 - 16982598 GTTAGTTGGAGGA---AGAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752946 18 - 3785965 GTTAGTTGGAGGA---AGAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342755 18 - 90373283 GTTAGTTGGAGGA---AGAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143661 18 - 179258 GTTAGTTGGAGGA---AGAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613058 21 - 5823884 GTTAGTTGGAGGAGGGAGAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98091 21 + 372756 GTTAATTGGAGGAAGGAGAAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16331955 21 + 16356641 GTTGGTCGGAGCAGGGAGAGC i saiBol1.JH378156 I 1917 C 0 s micMur3.chr18 56918764 20 + 57149010 GGCAGTTGGAGGAAGGAGA-C i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22899907 20 + 22939663 AGTGGTTGGACCAAGGAGA-T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838365 16 + 182113224 AGTAGCTGGAG-----AGAAC i mm10.chr2 C 0 C 0 s dasNov3.JH569290 318243 17 - 397369 AGTTGCTGAAGGAGAAA---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909092 95 - 2029793 I e canFam3.chr24 47650115 212 + 47698779 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=361163.000000 s hg38.chr20_KI270870v1_alt 164972 59 + 183433 TTGCCTGAGCTTCGGGCCTTTG-TTTTGT-------TTTTGTGA-GAGGGACGTGTCTCCT--AAATGAA s panTro5.chr20 66500396 59 + 66533130 TTGCCTGAGCTTCGGGCCTTTG-TTTTGT-------TTTTGTGA-GAGGGACGTGTCTCCT--AAATGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167616 59 + 62195757 TTGCCTGAGCTTCGGGCCTTTG-TTTTGT-------TTTTGTGA-GAGGGACGTGTCTCCT--AAATGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554037 58 - 578057 TTGCCTGAGCTTCGCGCCTTTG-TTTTG--------TTTTGTGA-GAGGGACGTGTCTCCT--AAATGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075530 59 - 110113093 TTGCCTGAGCTTCGTGCCTTTG-TTTTGT-------TTTTGTGA-GAGGGATGTGTCTCCT--AAATGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815360 55 - 92844088 TTGTCTGAGCTTCGTGCC-----TTTTGT-------TTTTGTGA-GAGGGTTGTGTCTCCC--AAATGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481030 55 + 96509753 TTGTCTGAGCTTCGTGCC-----TTTTGT-------TTTTGTGA-GAGGGTTGTGTCTCCC--AAATGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16950977 55 - 16982598 TTGTCTGAGCTTCGTGCC-----TTTTGT-------TTTTGTGA-GAGGGTTGTGTCTCCC--AAATGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3752964 55 - 3785965 TTGTCTGAGCTTCGTGCC-----TTTTGT-------TTTTGTGA-GAGGGTTGTGTCTCCC--AAATGAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342773 55 - 90373283 TTGTCTGAGCTTCGTGCC-----TTTTGT-------TTTTGTGA-GAGGGTTGTGTCTCCC--AAATGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143679 55 - 179258 TTGTCTGAGCTTCGTGCC-----TTTTGT-------TTTTGTGA-GAGGGTTGTGTCTCCC--AAATGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613079 55 - 5823884 TCGTCTGAGCTTCGTGCC-----ATTTGT-------TTTTGTGA-GAGGGTTGTGTCTCCC--GAATGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98112 58 + 372756 TGGCCTGAGCTCCGCGCCTTTGTTTTTGT-------TTTTGTGA-GAGGGATGTCTCTC----AAATGGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16331976 54 + 16356641 CGGCC-GAGCCTCGCGCCTTTGTTTTTG--------CTGTGGGA-GAGGGACGGGTCC------GACGGG i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56918784 54 + 57149010 GTGCCTAGGCTTGGCGC------CTTTGT-------TTTTGCGA-GAGGGATGTGCCTCTCTGATCCG-- i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22899927 51 + 22939663 CTGAATGGGATTGA-GC------CTGTGT-------TTTTGTAA-AAGGGATGTCCCTCCC--GCGCG-- i otoGar3.GL873542 C 0 I 2 s mm10.chr2 181838381 44 + 182113224 C--CCTGGGGCCTGGACC-----CTTTGT-------TTCTTTAT-TAGGCCTGTGCCTC----------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47650327 53 + 47698779 CCGCCTGGGCT--GGGCCCCCG-TTTTTC-------CCCCGT-----GGGATGTGCCTCCC--GAGTTTG i canFam3.chr24 I 212 C 0 s dasNov3.JH569290 318260 67 - 397369 TTTCCTGTACTTGGTGCTTGTG-TTTTGTTTTGTGATTTTGTGATGGGGAATGTGCCTCTT--AGATTGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909092 95 - 2029793 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=341555.000000 s hg38.chr20_KI270870v1_alt 165031 33 + 183433 --TGTTTGCTCCAGCGTTGCACCTCAAATAAGTCA s panTro5.chr20 66500455 33 + 66533130 --TGTTTGCTCCAGCGTTGCACCTCAAATAAGTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167675 33 + 62195757 --TGTTTGCTCCAGCGTTGCACCTCAAATAAGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554095 33 - 578057 --TGTTTGCTCCAGCGTTGCACCTCAAATAAGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075589 33 - 110113093 --TGTTTGCTCCAGCGTTGCACCTCAAATAAGTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815415 32 - 92844088 --TGTTTGCTCCAGCG-TGCACCTCAAATAAGTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481085 32 + 96509753 --TGTTTGCTCCAGCG-TGCACCTCAAATAAGTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951032 32 - 16982598 --TGTTTGCTCCAGCG-TGCACCTCAAATAAGTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753019 33 - 3785965 --TGTTTGCTCCAGCGTTGCACCTCAAATAAGTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342828 33 - 90373283 --TGTTTGCTCAAGCGTTGCACCTCAAATAAGTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143734 33 - 179258 --TGTTTGCTCCAGCGTTGCACCTCAAATAAGTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613134 33 - 5823884 --TGTTTGCACCAGCATCGCACCTCAAATAAGTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98170 33 + 372756 --TGTGTGCCCCAGCGTTGCACCTCAGATAAGTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332030 32 + 16356641 --TGTGCGCGCC-GCGCCGCGCCTCCAGGAGGGCG i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56918838 33 + 57149010 --TGTTTGCTCCAGCGTTGCACCTCGAATAAGTCA i micMur3.chr18 C 0 I 20 s proCoq1.NW_012150197v1 1909187 33 - 2029793 --TGTTTGCTCCAGCGTTGCACCTCGAATAAGTCA i proCoq1.NW_012150197v1 I 95 C 0 s otoGar3.GL873542 22899980 33 + 22939663 --TGTCTGCCGCAGCGTTGCACCTGAAACGAATCC i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181838425 17 + 182113224 -----------------TGC-CATCAACTCCGTCA i mm10.chr2 C 0 I 1 s canFam3.chr24 47650380 29 + 47698779 --TGCGTGCTCG---GTCGGCCCTCGAAGGGGTC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 318327 35 - 397369 TGTTTTTTTCCCAGCGTTGCACCTCAGAAAGGTCA i dasNov3.JH569290 C 0 C 0 e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=172859.000000 s hg38.chr20_KI270870v1_alt 165064 31 + 183433 CCTAAATATCCACGCCCTCTTTATCCACCCC s panTro5.chr20 66500488 31 + 66533130 CCTAAATATCCACGCCCTCTTTACCCACCCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167708 31 + 62195757 CCTAAATATCCACGCCCTCTTTATCCACCCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554128 31 - 578057 CCTAAATATCCACGCCCTCTTTATCCACCCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075622 31 - 110113093 CCTAGATATCCACGCTCTCTTTATCCACCCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815447 31 - 92844088 CCTGAATATCCACGCCCTCTTTATCCACCCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481117 31 + 96509753 CCTGAATATCCACGCCCTCTTTATCCACCCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951064 31 - 16982598 CCTAAATATCCACGCCCTCTTTATCCACCCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753052 31 - 3785965 CCTAAATATCCACGCCCTCTTTATCCACCCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342861 31 - 90373283 CCTAAATATCCACGCCCTCTTTATCCACCCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143767 31 - 179258 CCTAAATATCCACGCCCTCTTTATCCACCCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613167 31 - 5823884 CCTAAATATCCACGCCCTCTTTATCCACCCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98203 16 + 372756 TCCAAG---------------TATCCACCCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332062 15 + 16356641 -CCGAA---------------TGCCCACCCC i saiBol1.JH378156 C 0 C 0 s proCoq1.NW_012150197v1 1909220 16 - 2029793 TTTAAA---------------TATCTACCCT i proCoq1.NW_012150197v1 C 0 I 4 s otoGar3.GL873542 22900013 16 + 22939663 GTTAGA---------------TACCTGCCCT i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181838443 14 + 182113224 CTTGAG---------------TATCTGCC-- i mm10.chr2 I 1 C 0 s canFam3.chr24 47650409 19 + 47698779 --------TCCGCCTCCCCTTTATTCA---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 318362 21 - 397369 TTTAAATACTAAATAC-----TACCC----- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56918871 20 + 57149010 I e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=163779.000000 s hg38.chr20_KI270870v1_alt 165095 19 + 183433 ----CTCTTTACTCGTGTGACTA s panTro5.chr20 66500519 19 + 66533130 ----CTCTTTACTCGTGTGACTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167739 19 + 62195757 ----CTCTTTACTCGTGTGACTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554159 19 - 578057 ----CTCTTTACTCGTGTGGCTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075653 19 - 110113093 ----CTCTTGACTCGTGTGACTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815478 19 - 92844088 ----CTCTTTACTCGTGTGCCTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481148 19 + 96509753 ----CTCTTTACTCGTGTGCCTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951095 19 - 16982598 ----CTCTTTACTCGTGTGCCTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753083 19 - 3785965 ----CTCTTTACTCGTGTGCCTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342892 19 - 90373283 ----CTCTTTTCTCGTGTGCCTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143798 19 - 179258 ----CTCTTTACTCGTGTGCCTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613198 17 - 5823884 ------CTTTACTCGTGTGCCTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98219 14 + 372756 ----CTCTTTACTCGTGT----- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332077 11 + 16356641 ----C---TGACTCGTGG----- i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56918891 19 + 57149010 ----CTCTTTGCTCGTGTGCCTA i micMur3.chr18 I 20 C 0 s proCoq1.NW_012150197v1 1909240 19 - 2029793 ----CTCTTTACTCGTGTGCCTG i proCoq1.NW_012150197v1 I 4 C 0 s otoGar3.GL873542 22900030 19 + 22939663 ----GTCCTTAGTCGTGTGCCTG i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181838457 19 + 182113224 ----CTCTGCTCTCTTGGGCCCT i mm10.chr2 C 0 I 1 s canFam3.chr24 47650428 11 + 47698779 ------------TCACAGGCCTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 318383 23 - 397369 CTAACCCCTTATTCATGTGCCCA i dasNov3.JH569290 C 0 I 1 e cebCap1.NW_016107870v1 1202475 3838 + 1231380 I e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=869882.000000 s hg38.chr20_KI270870v1_alt 165114 80 + 183433 GAATAGTTTTCATTTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCTATCTGGGCGTTTGATAGACTGTCATTCAAGAATG s panTro5.chr20 66500538 80 + 66533130 GAATAGTTTTCATTTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCTATCTGGGCGTTTGATAGACTGTCATTCAAGAATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167758 80 + 62195757 GAATAGTTTTCATTTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCTATCTGGGCGTTTGATAGACTGTCATTCAAGAATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554178 80 - 578057 GAATAGTTTTCATTTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCTGTCTGGGCGTTTGATAGACTGTCATTCAAGAATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075672 80 - 110113093 GAATAGTTTTAATTTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCGATCTGGGCGTTTGATAGAGTGTCATTCAAGAATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815497 79 - 92844088 GATTAGTTCTCA-TTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCGATGTGGGCATTTGATAGAATGTCATTCAAGAATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481167 79 + 96509753 GATTAGTTCTCA-TTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCGATGTGGGCATTTGATAGAATGTCATTCAAGAATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951114 79 - 16982598 GATTAGTTCTCA-TTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCGATGTGGGCATTTGATAGAATGTCATTCAAGAATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753102 80 - 3785965 GATTAGTTTTCATTTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCGATGTGGGCATTTGATAGAATGTCATTCAAGAATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342911 80 - 90373283 GATTAGTTTTCATTTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCGATCTGGGCATTTGATAGAATGTCATTCAAGAAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143817 80 - 179258 GATTAGTTTTCATTTTTCTTCT---CAAGGGAATGGCTAAA-----CAGCTCCGATGTGGGCATTTGATAGAATGTCATTCAAGAATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613215 80 - 5823884 GAATAGTTTTCGTTTTTCATCT---CCAGGGAATGGCTGAA-----CAGCTCCGATCTGGGCATTTGATAGAATGTCATTCAAGAATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98233 82 + 372756 GAATAGTTTTCTTTTTTCTTCTC-ACAAGGGAATGGCTAAA-----CAGCTCCGATCTGGGCGTTTGATAGACTGTCCTTCAAGAATT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332088 82 + 16356641 GCAGAGCTTGCTGGCTGCTTCTC-TCAAGGGAGTGGCCAGA-----CAGCTCCGAGCTGGGCGTCCGGTGGACCGTCCTTCGCGCGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1206313 82 + 1231380 GAATAGTTTTCCTTTTTCTTCTC-ACACGGGAATGGCTAAG-----CAACTCCGAGCTGGGCATTTGATAGGCTGTCCTTCCAGAATT i cebCap1.NW_016107870v1 I 3838 C 0 s micMur3.chr18 56918910 82 + 57149010 GAATAGTTTTCTTTTTTCTAATC-AGAAAGGAATGGCTAAA-----CAACTCTATTCTGGGCATGTGGTAGAATGTCCTGCAAGAATT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1909259 82 - 2029793 GAATAGTTTTCTTTTTTCTTCTC-GCGAAGGAATGGCTAAG-----CAGCTCCATTCTGGGCGTGCGGTAGAATGTCCTGCAGGAATT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22900049 82 + 22939663 GGATAGTTTTCTTTTTTCTTTTC-ACGAGGGAATAACTAAA-----CAACTCCATTCTCGGCCTGTGGTAGAATGTCCTGCAAGAATT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838477 76 + 182113224 CACTGTTGTTCTCTGTTCTTAT---TGAAGACATTGCTAAAGT---GGGCTCCATT----ACGTCTGGTAGGTTGTC--TCTAGAACG i mm10.chr2 I 1 C 0 s canFam3.chr24 47650439 85 + 47698779 TAATGGTTTTC--TTTTCTTTTTGGCAGAAGAGTGGCTGAAGTAACCAACTCCACT-TGGGTGTCGAGTACACTGTCATTCAAGAATT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 318407 81 - 397369 GTATATTCTCTAGCTTTTCTCA--GGAAAGTAATGGCTAAA-----CAACTCCATTCCGGATGTATGGCAGATTGTCACCCAAGAATG i dasNov3.JH569290 I 1 C 0 e aotNan1.NW_018500483v1 2733380 705 + 11732439 I a score=118784.000000 s hg38.chr20_KI270870v1_alt 165194 9 + 183433 AGTGAAGTT s panTro5.chr20 66500618 9 + 66533130 AGTGAAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167838 9 + 62195757 AGTGAAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554258 9 - 578057 AGTGAAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075752 9 - 110113093 AGTGAAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815576 9 - 92844088 AGTGATGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481246 9 + 96509753 AGTGATGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951193 9 - 16982598 AGTGATGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753182 9 - 3785965 AGTGATGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90342991 9 - 90373283 AGTGACGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143897 9 - 179258 AGTGATGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613295 9 - 5823884 AGTGACGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98315 9 + 372756 AGTGAAGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332170 9 + 16356641 AGCGAAGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1206395 9 + 1231380 AGTGAAGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734085 9 + 11732439 AGTGAAGTC i aotNan1.NW_018500483v1 I 705 C 0 s micMur3.chr18 56918992 9 + 57149010 AGTGAAGTT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1909341 9 - 2029793 TGTGAAGCC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22900131 9 + 22939663 AGTGAAGTT i otoGar3.GL873542 C 0 I 120 s mm10.chr2 181838553 2 + 182113224 AG------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47650524 8 + 47698779 AGTGAAGT- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 318488 9 - 397369 AGTGAAGTC i dasNov3.JH569290 C 0 C 0 a score=737225.000000 s hg38.chr20_KI270870v1_alt 165203 57 + 183433 GAGGTGCCTATAAGCAACTCAGAAATTGTTGTGGCCACGCTTGGGGGAAATAGAGCC s panTro5.chr20 66500627 57 + 66533130 GAGGTGCCTGTAAGCAACTCAGAAATTGTTGTGGCCATGCTTGGGGGAAATAGAGCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167847 57 + 62195757 GAGGTGCCTGTAAGCAACTCAGAAATTGTTGTGGCCATGCTTGGGGGAAATAGAGCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554267 57 - 578057 GAGGTGCCTATAAGCAACTCAGAAATTGTTGTGGCCATGCTTGGGGGAAATAGAGCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075761 57 - 110113093 GAGGTGCCTATAAGCAACTCAGAAATTGTTGTGGCCATGCTTGGGGGAGATAGAGCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815585 57 - 92844088 GAGGTGCCTATAAGCAACTCAGAAATTGTTGTGGCCGTGCTTGGGGGAAATAGAGCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481255 57 + 96509753 GAGGTGCCTATAAGCAACTCAGAAATTGTTGTGGCCGTGCTTGGGGGAAATAGAGCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951202 57 - 16982598 GAGGTGCCTATAAGCAACTCAGAAATTGTTGTGGCCGTGCTTGGGGGAAATAGAGCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753191 57 - 3785965 GAGGTGCCTATAAGCAACTCAGAAATTGTTGTGGCCGTGCTTGGGGGAAATAGAGCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343000 57 - 90373283 GAGGGGCCTGTAAGCAACTCAGAAATTGTTGTGGCCGTGCTTGGGGGAAGTAGAGCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143906 57 - 179258 GAGGTGCCTATAAGCAACTCAGAAATTGTTGTGGCCGTGCTTGGGGGAAATAGAGCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613304 57 - 5823884 GAGGTGCCTGTAAGCAACTCAGAAATGGTTGTGGCCGTGCTTGGGGGAAGTAGAGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98324 57 + 372756 GAGGTGCCTGTCAGCAACTCAGAAATTGCTGCGGTCGTGCTTGGGGGAAACGGAGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332179 55 + 16356641 GAGGTGC--AGCAGCGACTGAGAAACGGTGGTGGTCGTGCGTGGGGGAGACGGAGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1206404 56 + 1231380 GAGGTGCC-AGCAGCAACTCAGAAATTGTTGTGGTCGTGCTTGGGGGAAACAGAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734094 57 + 11732439 GAGGTGCCCGTCAGCGACTCAGAAATCGCTGTGGTCGTGCTTGGGGGAAGCGGAGCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56919001 57 + 57149010 GAGGTGCCTTTAAACAAATCAGAAATTATCGTGGCTCTGCTTGGGGGAAATAAAGCC i micMur3.chr18 C 0 I 585 s proCoq1.NW_012150197v1 1909350 57 - 2029793 GAGGTGCCTTTAAACAAATTAGAAATTGTCGTGGCTCTGCTTGGGGGAAATAGAGCC i proCoq1.NW_012150197v1 C 0 I 316 s otoGar3.GL873542 22900260 54 + 22939663 GAGGTGCCTTGAAGCAAATC--AAATTGGGATAGCTGTGCTTGGGGGATATGGAGC- i otoGar3.GL873542 I 120 C 0 s mm10.chr2 181838555 35 + 182113224 -----GTATTTAAGAGGCTCAGCACTGATTAT---------------ATATAAAG-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47650532 40 + 47698779 AAGGTTCCTATAA---ACTCAGA---CCTTGTGGCTGTGCTTGTGA----------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 318497 53 - 397369 GAGGTACCTGTAAACAACTCCCAA---GTTGTGATTGTGGCTGGGG-AAATAGGGTT i dasNov3.JH569290 C 0 C 0 a score=350252.000000 s hg38.chr20_KI270870v1_alt 165260 36 + 183433 CTACACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA s panTro5.chr20 66500684 36 + 66533130 CTGCACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167904 36 + 62195757 CTGCACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554324 36 - 578057 CTACACT---CAGGTG----ATGAGAAGAGACCTC-AGAGGTGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075818 36 - 110113093 CTCCACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815642 36 - 92844088 TTACACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481312 36 + 96509753 TTACACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951259 36 - 16982598 TTACACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753248 36 - 3785965 CTACACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343057 36 - 90373283 CTACACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGCGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143963 36 - 179258 CTACACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613361 36 - 5823884 CTACACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGCGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98381 36 + 372756 GTACACT---CACGTG----ATGAGAGGAGACCTC-TGAGGTGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332234 36 + 16356641 GTGCGCT---CGGGTG----ATGGGAGGAGACCGC-AGAGGTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1206460 36 + 1231380 GTGTACT---CAGGTG----ATGAGAGGAGACCTC-AGAGGTGA i cebCap1.NW_016107870v1 C 0 I 19 s aotNan1.NW_018500483v1 2734151 36 + 11732439 GCACACT---CCGGTG----ACGACAGGAGACCTC-GGAGGTGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22900314 22 + 22939663 ---------------------TGTGCGGGGACCTC-AGAGTTAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838590 28 + 182113224 ------------GGAA----TTGAAGTGGGCCCTCTTGAGGTGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47650572 35 + 47698779 CTCCGCTTTACAGGTG----GAG-GATGGCACCTG-CGCGG--- i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 318550 34 - 397369 ---------CTAGGTGTGGAGTGAGCGGGGACCTT-AGAGGTGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909407 316 - 2029793 I e micMur3.chr18 56919058 585 + 57149010 I a score=4415.000000 s hg38.chr20_KI270870v1_alt 165296 1 + 183433 C s panTro5.chr20 66500720 1 + 66533130 C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167940 1 + 62195757 C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554360 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075854 1 - 110113093 C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815678 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481348 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951295 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753284 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343093 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 143999 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613397 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98417 1 + 372756 T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332270 1 + 16356641 C i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2734187 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 I 78 s otoGar3.GL873542 22900336 1 + 22939663 T i otoGar3.GL873542 C 0 I 6 s mm10.chr2 181838618 1 + 182113224 T i mm10.chr2 C 0 C 0 s dasNov3.JH569290 318584 1 - 397369 C i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909407 316 - 2029793 I e canFam3.chr24 47650607 1 + 47698779 I e micMur3.chr18 56919058 585 + 57149010 I e cebCap1.NW_016107870v1 1206496 19 + 1231380 I a score=3453.000000 s hg38.chr20_KI270870v1_alt 165297 4 + 183433 C-GAT s panTro5.chr20 66500721 4 + 66533130 C-GAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167941 4 + 62195757 C-GAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554361 4 - 578057 C-GAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075855 4 - 110113093 C-GAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815679 4 - 92844088 G-GGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481349 4 + 96509753 G-GGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951296 4 - 16982598 G-GGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753285 4 - 3785965 G-GGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343094 4 - 90373283 G-GGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144000 4 - 179258 G-GGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613398 4 - 5823884 G-GGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98418 5 + 372756 ATGGT i calJac3.chrUn_GL286459 C 0 I 13 s saiBol1.JH378156 16332271 4 + 16356641 G-GGC i saiBol1.JH378156 C 0 I 13 s otoGar3.GL873542 22900343 4 + 22939663 C-GGT i otoGar3.GL873542 I 6 I 9 s mm10.chr2 181838619 3 + 182113224 --GGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47650608 3 + 47698779 G-GG- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 318585 4 - 397369 -TGCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909407 316 - 2029793 I e micMur3.chr18 56919058 585 + 57149010 I e cebCap1.NW_016107870v1 1206496 19 + 1231380 I e aotNan1.NW_018500483v1 2734188 78 + 11732439 I a score=492063.000000 s hg38.chr20_KI270870v1_alt 165301 71 + 183433 -CCAGGGCCTTGCTCCCT--GCGCCAccccagctcgtacctcca--gtgg-aactt------ggctgggcttatc------------aagagctc s panTro5.chr20 66500725 71 + 66533130 -CCAGGGCCTTTCTCCCT--GCGCCAccccagctcgtacctcca--gtgg-aactt------ggctgggcttatc------------aagagctc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62167945 71 + 62195757 -CCAGGGCCTTTCTCCCT--GCGCCAccccagctcgtacctcca--gtgg-aactt------ggctgggcttatc------------aagagctc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554365 71 - 578057 -CCAGGGTCTTTCTCCCT--GCGCCAccccagctcgtacctcca--gtgg-aactt------ggctgggcttatc------------aagagctc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075859 71 - 110113093 -CCAGGGCCTTTCTCCCT--GCcccaccccagctcgtacctcca--gtga-aactt------ggctgggcttatc------------aagagctc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815683 71 - 92844088 -CCAGGGCCTTTCTCCCT--GTCCCACCCCAGCTCGTACCTCCG--GTGG-AACTC------CGCTGGGGTTGTC------------AAGagctc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481353 71 + 96509753 -CCAGGGCCTTTCTCCCT--GTCCCACCCCAGCTCGTACCTCCG--GTGG-AACTC------CGCTGGGGTTGTC------------AAGagctc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951300 71 - 16982598 -CCAGGGCCTTTCTCCCT--Gtcccaccccagctcgtacctccg--gtgg-aactc------cgctggggttgtc------------aagagctc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753289 71 - 3785965 -CCAGGGCCTTTCTCCCT--Gtcccaccccagctcgtacctccg--gtgg-aactc------ggctggggttgtc------------aagagctc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343098 70 - 90373283 -CCAGGGCCTTTCTCCCT--Gtcccaccccagctcgtacctccg--gtgg-aactc------ggct-gggttgtc------------aagagctc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144004 71 - 179258 -CCAGGGCCTTTCTCCCT--Gtcccaccccagctcgtacctccg--gtgg-aactc------ggctggggttgtc------------aagagctc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613402 71 - 5823884 -CCAGGGCCTTTCTCCCT--GTCCCACCCCAGCTCGTACCTCCG--GTGG-AACTT------GGCTGGGGTTGTC------------AAGagctc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98436 65 + 372756 -CCAGTGCCTTTCACCCT--GCCCCACTCCAGCTCGTACCTCCAGTGTAGTAACTT------GGCTGGGG---------------------GCTC i calJac3.chrUn_GL286459 I 13 C 0 s saiBol1.JH378156 16332288 41 + 16356641 -CCAGTGCCTTCCTCCCT--GCC-----------------------GTGG-AACTT------GGCTGGGG---------------------GCTC i saiBol1.JH378156 I 13 C 0 s cebCap1.NW_016107870v1 1206515 62 + 1231380 -CCAGTGCCTTTCCCCCT--GCCCCACGCCGGCTCGTACCTCCA--GTGG-AACTT------GGCTGGGG---------------------GCTC i cebCap1.NW_016107870v1 I 19 C 0 s otoGar3.GL873542 22900356 77 + 22939663 --CAATGCCTTCACCCCTTGGGCTCACCCGTGCTCGTCACTCCC--CTGG-GACAT------GGCTGGGGTGTTC-------TGAAAAAGGGCTC i otoGar3.GL873542 I 9 C 0 s mm10.chr2 181838622 77 + 182113224 -ATTTGGTCTCTCCTTTT--GCCCTGGCTTTTCTCCATCCTCCT--CTGA-GACCT------TGCTGGGAGACTT------GGGAGAAGGGACTC i mm10.chr2 C 0 I 22 s canFam3.chr24 47650611 88 + 47698779 -TCGGTGCCGAGGCCCCT-GGACCCACTTCAGCTTGTCCCTGGC--CTGG-GACGTCCCGGGGGCGGGGGTGCTCGAGGCCGGGCCTGAGAAC-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 318589 60 - 397369 CCGGGTGACTGCCCCATG--GCCCTGGCCCTGCCCGTgctcact--ctct-acctg------agaaagtgc------------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909407 316 - 2029793 I e micMur3.chr18 56919058 585 + 57149010 I e aotNan1.NW_018500483v1 2734188 78 + 11732439 I a score=1897387.000000 s hg38.chr20_KI270870v1_alt 165372 195 + 183433 ctttcatt-cattgcaacttcattt-gttagaaagcttctctgtgtatt---tagtaggcattgtctc----caacatgtaccactggtctggcttttgttaggcccattaatag--------tgtacat----gtgacagcctttcaagtataggtgctccccggcttacggtggggtcgcatcccagtaaacacatcgttaaa-----cctgaagtcga s panTro5.chr20 66500796 195 + 66533130 ctttcatt-cattgcaacttcattt-gttagaaagcttctctgtgtatt---tagtaggcattgtctc----caacatgtaccactggtctggcttttgttaggcccgttaatag--------tgtacat----gtgacagcctttcaagtataggtgctccccgacttacggtggggtcgcatcccagtaaacacatcgttaaa-----cctgaagtcga i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168016 195 + 62195757 ctttcatt-cattgcaacttcattt-gttagaaagcttctctgtgtatt---tagtaggcattgtctc----caacatgtaccactggtctggcttttgttaggcccgttaatag--------tgtacat----gtgacagcctttcaagtataggtgctccccgacttacggtggggtcgcatcccagtaaacacatcgttaaa-----cctgaagtcga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554436 194 - 578057 ctttcatt-cattgcaacttcattt-gttagaaaacttctctgtgtatt---tagtaggcattgtctc----caacatgtaccactggtctggcttttgttagg-ccattaatag--------tgtacat----gtgacagcctttcaagtataggtgctcctcgacttacggtggggtcgcatcccagtaaacacatcgttaaa-----cctgaagtcga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110075930 193 - 110113093 ctttcatt-cactgcaacttcattt-gttagaaagcttctctgtgtatt---tagtaggcattgtctc----caacatgtaccactggtctggcttttgttagg-ccgttaatag--------tgtacat----gtgacagcttttcaagtacaggtgctcctcgacttacggtggggtcgcat-ccagtaaacacatcgttaac-----cctgaagtcga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815754 195 - 92844088 ctttcatt-catggcaacttcattt-gttagaaagcttctctatgtatt---tagtaggcattgtctc----cagcatgtaccactggtctggcttttgttaggcccatttatag--------tgtgcat----gtgacagcctttcaggtacaaatgctcctcgacttgtgatggggtcgcatcccagtaaacacgtcgttaaa-----cctgaagtcga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481424 195 + 96509753 ctttcatt-catggcaacttcattt-gttagaaagcttctctatgtatt---tagtaggcattgtctc----cagcatgtaccactggtctggcttttgttaggcccatttatag--------tgtgcat----gtgacagcctttcaggtacaaatgctcctcgacttgtgatggggtcgcatcccagtaaacacgtcgttaaa-----cctgaagtcga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951371 195 - 16982598 ctttcatt-catggcaacttcattt-gttagaaagcttctctatgtatt---tagtaggcattgtctc----cagcatgtaccactggtctggcttttgttaggcccatttatag--------tgtgcat----gtgacagcctttcaggtacaaatgctcctcgacttgtgatggggtcgcatcccagtaaacacgtccttaaa-----cctgaagtcga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753360 195 - 3785965 ctttcatt-catggcaacttcattt-gttagaaagcttctctgtgtatt---tagtaggcattgtctc----cagcatgtaccactggtctggcttttgttaggcccattaatag--------tgtgcat----gtgacagcctttcaggtacaaatgctcctcgacttgtgatggggtcgcatcccagtaaacacgtcgttaaa-----cctgaagtcga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343168 195 - 90373283 ctttcatt-catggcaacttcattt-gttagaaagcttctctgtgtatt---tggtaggcattgtctc----cagcatgtgccactggtctggcttttgttaggcccattaatag--------tgtgcat----gtgacagcctttcaggtacagatgctcctcgacttgtgatggggtcgcatcccagtaaacacgtcgttaaa-----cctgaagtcga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144075 195 - 179258 ctttcatt-catggcaacttcattt-gttagaaagcttctctgtgtatt---tagtaggcattgtctc----cagcacgtaccactggtctggcttttgttaggcccattaatag--------tgtgcat----gtgacagcctttcaggtgcaaatgctcctcgacttgtgatggggtcgcatcccagtaaacacgtcgttaaa-----cctgaagtcga i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613473 195 - 5823884 ctttcatt-catggcaacttcatgt-gttagaaagcttctctgtgtatt---tagtaggcattgtctc----ttgcatgtaccactggtctggcttttcttaggtccattaatag--------tatgcat----gtgacagcctttcaggtacagatgctcctcgacttgtgatggggtcgcatcccagtaaacacgtcgttaaa-----cctgaagtcga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98501 195 + 372756 TTTTCATT-CTTTGCAACTTCAGTT-GTTAGAAAGCTTCTCTGTGTATT---TAGGTGGCGTTGTCTG----CAACATGTACCGCTGGTCTGGCTTTTGTTAGGCCCGTTAATGG--------TGTGCAT----GTGACAGCCTTTCAGGTAcagatgctgcttgacttaggatggggttgcatcccagtaaacacatcgttaaa-----ccttgagtcga i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332329 195 + 16356641 CTTTCGTT-CTTTGCAGCTTCAGTT-GTTAGAAAGCTCCGCTGTGTATT---TAGGTGGCGTTGTCTG----CAGCCTGGACCGCTGGTCTGGCTTTTGTGAGGCCCGTTGATAG--------TGTGCGT----GTGACAGCCTTTCAGGTAcaggtgctgcttgacttcggatggggttgcatcccagtcagcgcatctttaaa-----ccttcagtcca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1206577 190 + 1231380 CTTTCATT-CTTTGCAACTTCAGTT-GTTAGAAAGCCTCTC--TGTATT---TAGGTGGC---GTCTG----CAACACGTACCGCTGGTCTGACTTTTGTTAGGCCCGTTAATAG--------TGTGCAT----GTGACAGCCTTTCAGGTAcacatgctgctcgacttaggatggggttgcagcccagtaaacacatcgttaaa-----ccttaagttga i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734266 192 + 11732439 CTTTCATT-CTTTGCAACTTCA----GTTAGAAAGCTCCTCTGCGTATT---TAGGTGGCGTTGTCTG----CAACGTGTGCCGCTGGTCTGGCTTTTGTTAGGCCCGTTAGTAG--------CGTGCGT----Gtgacagcctttcaggtacagatgctgctccacttaggatggggttgcatcccagtaaacacaccgttaaa-----ccttaagtcga i aotNan1.NW_018500483v1 I 78 C 0 s otoGar3.GL873542 22900433 192 + 22939663 ATTTTATTGTTTTGCAATTCTGGTT-GTTAGAAAGCTT-TCTGTGTATT---TAGCAGGCAGCGTCTCCACTCAGCACGTACTACTGTTCTGAC-TTTGTCAGGCCTATGAATAG--------TGTAGAT----GTA-----CTTCCCgg------tgctcctcgccttatgaaggggttacatctgcgtaaacacatcgtgaaaaagagttataagttgg i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838721 118 + 182113224 ttcttttt-ttttttAATTTCGGTTAGTCCCAAAGCTTTTCCACGCACGAAACAGTAGGAATTGTCCCTAGTCAGTACATACTACTGGTC-AGCTTTCATT---------------------------------------------------CAGATGC-------------------------------------------AGA-----CCACAAGTG-- i mm10.chr2 I 22 C 0 s canFam3.chr24 47650699 136 + 47698779 AGTTCAGG-CCTTG-AGTTCTAGGT-GTCAGGAAGCTTTTCTGTG--TT---ACGTAGAACTACTCTC-ACCTACCGTGTCTCACCGACCCAGCTTTTATCAGGTCCGGGAATGG--------TGTATGTATAGGTGGCTGCCTTTCAAGTAT-------------------------------------------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 318649 132 - 397369 atgtcctt-atctgcaattccagtt-gtt----agcttctctttgtgtt---cttcagaaatcatctg----aggtgtatttcactggtccttctttgtccagggcagggaagagcagtctgatgtacat----atagcagcctttcaa------------------------------------------------------------------------ i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1909407 316 - 2029793 I e micMur3.chr18 56919058 585 + 57149010 I a score=1426317.000000 s hg38.chr20_KI270870v1_alt 165567 133 + 183433 accatccgaagt-cggagaccatctgtatttgaaaaaag-tccctttg----ca----ttgcttgt--aagagttctggttttcaaggtgagaaatctgtt------tgtgtgtttgttt--------------------------------gatcattc----tgcccaaaggagatgtggctttg s panTro5.chr20 66500991 133 + 66533130 accgtctgaagt-cggagaccatctgtatttgaaaaaag-tccctttg----ca----ttgcttgt--aagagttctggttttcaaggtgagaaatctgtt------tgtgtgtttgttt--------------------------------gatcattc----tgcccaaaggagatgtggctttg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168211 133 + 62195757 accatctgaagt-cggagaccatctgtatttgaaaaaag-tccctttg----ca----ttgcttgt--aagagttctggttttcaaggtgagaaatctgtt------tgtgtgtgtgttt--------------------------------gatcattc----tgcccaaaggagatgtggctttg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554630 136 - 578057 accatccgaagt-cggagaccatctgtatttgaaaaaag-tccctttgcattca----ttccttgt--aagagttctggttttcaaggtgagaaatctgtt------tgtgtgtttgttt--------------------------------gatcattc----tg-ccaaaggagatgtggctttg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076123 134 - 110113093 accatccgaagtccggagaccatctgtatttgaaaaaag-tccctttg----ca----ttccttgt--cagagttctggttttcaaggggagaaatctgtt------tgtgtgtttgttt--------------------------------gatcattc----tgcccaaaggagatgtggctttg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92815949 129 - 92844088 gccatcctaagt-cggagaccatctgtatttgaaaaaag-tccctttg----ca----ttccttgt--aagagttctggttttcaaggtgagaaatctgt----------gtgtttgttt--------------------------------gatcattc----tgcccaaaggagatgtggctttg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481619 129 + 96509753 accatcctaagt-cggagaccatctgtatttgaaaaaag-tccctttg----ca----ttccttgt--aagagttctggttttcaaggtgagaaatctgt----------gtgtttgttt--------------------------------gatcattc----tgcccaaaggagatgtggctttg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951566 125 - 16982598 accatcctaagt-cggagaccatctgtatttgaaaaaag-tccctttg----ca----ttccttgt--aagagttctggttttcaaggtgagaaatctgt----------g----tgttt--------------------------------gatcattc----tgcccaaaggagacgtggctttg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753555 129 - 3785965 accatcctaagt-cggagaccatctgtatttgaaaaaag-tccctttg----ca----ttccttgt--aagagttctggttttcaagatgagaaatctgt----------gtgtttgttt--------------------------------gatcattc----tgcccaaaggagatgtggctttg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343363 129 - 90373283 accatcctaagt-cggagaccatctgtatttgaaaaaag-tccctttg----ca----ttccttgt--aagagttcgggttttcaaggttagaaatctgt----------gtgtttgtct--------------------------------gatcattc----tgcccaaaggagatgtggctttg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144270 129 - 179258 accatcctaagt-cggagaccatctgtatttgaaaaaag-tccctttg----ca----ttccttgt--aagagttctggttttcaaggtgagaaatctgt----------gtgtgtgttt--------------------------------gatcattc----tgcccaaaggagatgtggctttg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613668 124 - 5823884 accatcctaagt-cgaagaccatctgtatttgaaaaaag--ccctttg----ca----ttccttgt--aggagttctggttttcaaggtgagaaatctgt--------------ttgttt--------------------------------catcattc----tgcccaaaggagatgcggctttg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98696 137 + 372756 accatcctaagt-cggagattatctgTATTTGAAAAATG-CCCCTTTG----CC----TTCCTTGT--AAGAGTTCTGGTTTTCTAGGTGAGAAATCTATTTG--TGTGTGTGTGTGTTT--------------------------------GGTCGTTC----TGCCCAAAGGAGATGTGGCTTTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332524 139 + 16356641 accgtcctgagt-cggagaccatctgTATTTGAAAAATG-TCCCTTTG----CC----TTCCTTGT--AAGAGTTCTGGTTTTCTAGGTGAGAAATCTATTTGTATGTGTGTGTGTGTTT--------------------------------GATCATTC----TGCCCAAAGGAGATGTGGCTGTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1206767 171 + 1231380 accatcctaggt-tggagaccatctgTATTTGAAAAATG-TCCCTTTG----CC----TTCCGTGT--AAGAGTTCTGGTTTTCTAGGTGAGAAATCtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgAGATGACTC----TGCCCAAAGGAGCTGTGGCTGTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734458 134 + 11732439 accatgctaagt-cggagaccatctgtatttg-aaaatg-accctttc----cc----ttgcttgt--aagagttctggttttctaggtgagaaatctatt----tgtgtgtgtgtgttt--------------------------------gatcattc----tgcccaaaggagatgtggctttg i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1909723 126 - 2029793 accatcctaagc-tggggaccatctgtgtttgaaaaaag-tccttttg----ca----ttgcttgt--aagaattcttgttttcaaaatgagaagtctca------------gttttttc--------------------------------c-tcattc----ttcctgaagaaggtgtggttttg i proCoq1.NW_012150197v1 I 316 C 0 s otoGar3.GL873542 22900625 126 + 22939663 accatcttaagt-ttaggactgATTGTGTTTTGGAAAA--TCCTTTTG----GT----TTCCTTTT--AAGCGTTCTTGTTTTCAAAATGAGAAGTCTCC------------GTTTTCCC--------------------------------CACCATTC----TGCTTGAAGGAGGTGTGGTTTTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838839 94 + 182113224 ---------------------ATATGCATTTGAG-------------G----CA----CACCCTCC--AAGAGTTCTGGTTTTCAAGACAAGAAGCCTTG------------GCTATTTT--------------------------------CCTCGTTC----TGCTGGCAGGATG-ATGGTTTAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47650835 98 + 47698779 ----------------------------TTGAAAAAAAA-TCCCTCTA----CATGTGTTCCTTGC---AGAGTTCTGGTTTTCAAGATGAG---TCTGT--------------TTCTTC--------------------------------TATTATTC----TGCCGGCAGGAGGTGTGGCTTGG i canFam3.chr24 C 0 I 539 s dasNov3.JH569290 318781 103 - 397369 -------------------------gtatttgaaaaaagatgactcca----ca----ttccttgtataagagttctggatctcaaga--agtcgtctgc------------gtttcttt--------------------------------catcatttcacatgcctgaa-----tgtggttttg i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56919058 585 + 57149010 I a score=864316.000000 s hg38.chr20_KI270870v1_alt 165700 69 + 183433 ggtccttttcccca-ctcatcttccaca---atgaattactttgtccatattaccctaaagaagtgacatcca s panTro5.chr20 66501124 69 + 66533130 ggtccttttcccca-ctcatcttccaca---gtgaattactttgtccatattaccctaaagaagtgacatcca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168344 69 + 62195757 ggtccttttcccca-ctcatcttccaca---gtgaattactttgtccatattaccctaaagaagtgacatcca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554766 69 - 578057 ggtccttttcccta-ctcatcttccaca---atgaattactttgtccatattactctaaagaagtgacaccca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076257 68 - 110113093 ggtccttttcccca-ctcatcttccaca---atgaattactttgtccatattaccgttaagaagt-acatcca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816078 69 - 92844088 ggtcctttttccca-ctcatcttccaca---atgaattactgtgtccgtattacccttaagaagtgacatcca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481748 69 + 96509753 ggtcctttttccca-ctcatcttccaca---atgaattactgtgtccgtattacccttaagaagtgacatcca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951691 69 - 16982598 ggtcctttttccca-ctcatcttccacg---atgaattactgtgtccatattacccttaagaagtgacatcca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753684 69 - 3785965 gatcctttttccca-ctcatcttccaca---atgaattactgtgtccatattacccttaagaagtgacatccG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343492 69 - 90373283 ggtcctttttccca-ctcatcttccaca---atgaattactttgtccatattacccttaagaagtgacatcca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144399 69 - 179258 ggtcctttttccca-ctcgtcttccaca---atgaattactgtgtccatattacccttaagaagtgacatcca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613792 69 - 5823884 ggtcctttttccca-ctcatcttccaca---gtggattactttgtccatattacccttaagaagtgacatcca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98833 67 + 372756 GGTTCTT-TCCCCA-TTCATCTTCCACA---GTGAATTACTTTGTCCATATTCCCGTTAAGAAGTGACAT-CA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332663 69 + 16356641 GGTTCTTCTCCCCA-CCTATCTTCCACA---GTGAATTACTTTGTCCATATTCCCCTTAAGAATTGACATCCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1206938 69 + 1231380 GGTTCTTTTCCCCA-CCTGTCTTTGACA---GTGAATTGCTTTGTCCATATTCCCCTTAAGAAGTGACATCCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734592 69 + 11732439 ggttcttttctcca-ctcgtcttccaca---gtgaatcgctttgtccatattcttcttaaaaagtgacgtcca i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1909849 69 - 2029793 ggtctttttccccagctcatcttccac----atgaattactttgtccatattccacttaagaagtgacatccg i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22900751 69 + 22939663 GGTCTTTTTCCCCAGCTCATTTTCCAC----GTGAATTATTTTGTCCATATTCACCTTAAGAAGTGACATCCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181838933 44 + 182113224 AATACATGTTCCTA-----------GCA---AGGTATC---------------CCCTAAGAAAGTGACATCCA i mm10.chr2 C 0 I 108 s canFam3.chr24 47651472 67 + 47698779 GATCCTATTCCCCAGCTCATTTTCCACA---TGAAATTCCCTTGTGCATATTTCCCTT---AAGTGATACTCA i canFam3.chr24 I 539 C 0 s dasNov3.JH569290 318884 71 - 397369 gagccttctccccagctcatcttcagtgggcatggat-agtttgtcagtactcctcttaGGAATT-ACATCCC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56919058 585 + 57149010 I a score=234560.000000 s hg38.chr20_KI270870v1_alt 165769 48 + 183433 agttggaatgtgatcttccgtatg-----------------------tcgcctCCCAAA-------------------AC-----------------------CCCACTACCA s panTro5.chr20 66501193 48 + 66533130 agttggaatgtgatcttccgtatg-----------------------tcgcctCCCAAA-------------------AC-----------------------CCCACTACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168413 48 + 62195757 agttggaatgtgatcttccgtatg-----------------------tcgcctCCCAAA-------------------AC-----------------------CCCACTACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554835 48 - 578057 agttggaatgtggtcttccgtatg-----------------------tagcctCCCAAA-------------------AC-----------------------CCCATTACTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076325 48 - 110113093 ggttggaatgtgatcttccgtacg-----------------------tagcctCCCAAA-------------------AC-----------------------CCCATTACCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816147 37 - 92844088 TGTTGGAGTGTGGTCTT----------------------------------CTCCCAAA-------------------AC-----------------------TCCATTACCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481817 37 + 96509753 TGTTGGAGTGTGGTCTT----------------------------------CTCCCAAA-------------------AC-----------------------TCCATTACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951760 37 - 16982598 TGTTGGAGTGTGGTCTT----------------------------------CTCCCAAA-------------------AC-----------------------TCCATTACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753753 37 - 3785965 TGTTGGAGTGTGGTCTT----------------------------------CTCCCAAA-------------------AC-----------------------TCCATTACCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343561 37 - 90373283 TGTTGGAGTGTGGTCTT----------------------------------CTCCCAAA-------------------AC-----------------------CCCATTACCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144468 37 - 179258 TGTTGGAGTGTGGTCTT----------------------------------CTCCCAAA-------------------AC-----------------------TCCATTACCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613861 48 - 5823884 ggttggagtgtggtcttctgtatg-----------------------tagcctCCCAAA-------------------AC-----------------------CCCATTACCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98900 48 + 372756 GGTTGGATTGTGGTCTTCTGTATG-----------------------TAGCCTCCCAAA-------------------CT-----------------------GCCATTACCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332732 38 + 16356641 GGTTGGATTGTG----------TG-----------------------TAGGCTCCCAAA-------------------TT-----------------------GCCGTTACCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207007 48 + 1231380 GGTTGGATTGTGGTCTCCTGTGTG-----------------------TAGCGTCCCAAA-------------------TT-----------------------GCCATTACCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734661 48 + 11732439 ggttgaaTTGCGGTTTCTCGTCTG-----------------------TAGCCTCCCAAA-------------------TT-----------------------GCCATTACCA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1909918 71 - 2029793 agttggaatgtggtcctccatatg-----------------------taggttggcaaa-------------------cccagcatagactagaatcgtgactcccatcatcg i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22900820 12 + 22939663 GGTTGGAACGCG----------------------------------------------------------------------------------------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47651539 68 + 47698779 GCTTGGAACATGGCACTCCATGTTTGTCTGACAAACCCAGCGTAGGCTGGGGTCACAAA-------------------CA-----------------------CCCATTA--- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 318955 67 - 397369 CAGTGGAGCATGCACCTCCACTTG-----------------------CAGTCTCACTAACTCCATGGCTGGAATCATGAC-----------------------CCCATGAGCA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181838977 108 + 182113224 I e micMur3.chr18 56919058 585 + 57149010 I a score=939095.000000 s hg38.chr20_KI270870v1_alt 165817 73 + 183433 TAGCTTCATGCTTGTGTTGACACAGCCACAATCACAA----CTC-----AGGTGTCAGTTCTG-----AGACCTTCCCATGCCTGTC s panTro5.chr20 66501241 73 + 66533130 TAGCTTCATGCTTGTGTTGACACAGCCACAATCACAA----CTC-----AGGTGTCAGTTCTG-----AGACCTTCCCATGCCTGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168461 73 + 62195757 TAGCTTCATGCTTGTGTTGACACAGCCACAATCACAA----CTC-----AGGTGTCAGTTCTG-----AGACCTTCCCATGCCTGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554883 73 - 578057 TAGCTTCATGCTTGTGTTGACACAGCCACAATCACAA----CTC-----AGGTGTCAGTTCTG-----AGACCTTCCCATGCCTGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076373 77 - 110113093 TAGCTTCATGCTTGTGTTGATACAGCCACAATCACAGCCTCCTC-----AGGTGTCAGTTCTG-----AGACCTTCCCATGCCTGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816184 76 - 92844088 T-GCTTCATACTTGTGTTGACACAGCCACAATCACAACCTCCTC-----AGGTGTCAGTTCGG-----AGACCTTCCCCTGCCTGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481854 76 + 96509753 T-GCTTCATACTTGTGTTGACACAGCCACAATCACAACCTCCTC-----AGGTGTCAGTTCGG-----AGACCTTCCCCTGCCTGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951797 76 - 16982598 T-GCTTCATACTTGTGTTGACACAGCCACAATCACAACCTCCTC-----AGGTGTCAGTTCGG-----AGACCTTCCCCTGCCTGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753790 76 - 3785965 T-GCTTCATGCTTGTGTTGACACAGCCACAGTCACAACCTCCTC-----AGGTGTCAGTTCTG-----AGACCTTCCCATGCCTGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343598 76 - 90373283 T-GCTTCATGCTTGTGTTGACACAGCCACAATCACAACCTCCTC-----AGGTGTCAGTTCTG-----AGACCTTCCCATGCCTGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144505 76 - 179258 T-GCTTCATGCTTGTGTTGACACAGCCACAATCACAACCTCCTC-----AGGTGTCAGTTCTG-----AGACCTTCCCATGCCTGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613909 77 - 5823884 CAGCTTCGTGCTTGTGTTGGCACAGCCACAATCACAGGCTCCTC-----AGGTGTCAGTTCTG-----AGACCTTCCCATGCCGGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 98948 77 + 372756 TAGCTTCGTGCTTGTGTTGACACAGCCACAATCACGACCTCCTC-----AGGTATCAATTCTG-----AGACCTTCCCATGCCTGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332770 75 + 16356641 CAGCTTTGTGCTTGAGTTGACACAGCCACAATCACGACCTCCTC-----AAGTATCAATTCTG-----AGACCTT--CATGCCTGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207055 77 + 1231380 TAGGTTCGTGCTTGTTTTGACACAGCCACGATCACGACCCCCTC-----AGGTATCAATTCTG-----AGACCTTCCCATGCCTGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734709 77 + 11732439 TAGCTTCGTGCTTGTGTTGACACAGCCACAATCACGACCTCCTC-----GGGTATCACTTCTG-----AGACCTTCGCATGCCTGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56919643 76 + 57149010 TAGCTTCATGCTTATGTTGACAAAGCCACGATCACAG-CTCCTC-----AGTTGTCAATCCTG-----AGACCTTCCCGTGCCTGCT i micMur3.chr18 I 585 C 0 s proCoq1.NW_012150197v1 1909989 77 - 2029793 tagtttcatgcttacgttgacagagccACAATCACAACCTCCTC-----AGTTGTCAATCCTG-----AGACCTTCCCATGCCTGTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22900832 58 + 22939663 -----------------TGACAAAGCCATAATCACAGCTGCCTG-----AGTTGTCAAT--TA-----AGACCTTCCTACGCCTGCT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47651607 75 + 47698779 CGGATTCAGGC-TGTACTGGCCCAGCTATA------GCCTCCTTGGTTGGGTTGTCAATCATG-----AGGCCTTCCCATGCCCGCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319022 73 - 397369 -TGCTTCAGGCTTGCTTTGAGGTACTCAAAACCACTGTCTCTTC-----ACAT-TGAGTCATGTGAGAAGACA-------GCCTGCT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181838977 108 + 182113224 I a score=476596.000000 s hg38.chr20_KI270870v1_alt 165890 37 + 183433 GCCACTCAGCAAGTGTTCTTCA---TGTGCCCTGGCAGTT- s panTro5.chr20 66501314 37 + 66533130 GCCACTCAGCAAGTGTTCTTCA---TGTGCCCTGGCAGTT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168534 37 + 62195757 GCCACTCAGCAAGTGTTCTTCA---TGTGCCCTGGCAGTT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554956 37 - 578057 GCCACTCAGCAAGTGTTCCTCA---TGTGCCCTGGCAGTT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076450 37 - 110113093 GCCACTCAGCAAGTGTTCTTCA---TGTTCCCTGGCAGTT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816260 37 - 92844088 ACCACCCAGCAAGTGTCCCTCA---TGTGCCCTGGCAGTT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481930 37 + 96509753 ACCACCCAGCAAGTGTCCCTCA---TGTGCCCTGGCAGTT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951873 37 - 16982598 ACCACCCAGCAAGTGTCCCTCA---TGTGCCCTGGCAGTT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753866 37 - 3785965 ACCACCCAGCAAGTGTCCCTCA---TGTGCCCTGGCAGTT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343674 37 - 90373283 ACCACCCAGCAAGTGTCCCTCA---TGTGCCCTGGCAGTT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144581 37 - 179258 ACCACCCAGCAAGTGTCCCTCA---TGTGCCCTGGCAGTT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5613986 37 - 5823884 ACCACCCAGCAAGTGTCCCTCA---TGTGCCCTGGCAGTT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99025 37 + 372756 GCCACTCAGCAAGTGTTCCTCA---TGTGCCCTGGTAGTT- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332845 37 + 16356641 GCCACTCAGCAAGTGTTCCTCA---TGTGCCCTGGTAGTT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207132 37 + 1231380 GCCACTCAGCAAGTGTTCCTCA---TGTGCCCTGGTAGTT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734786 37 + 11732439 GCGGCTCAGCAAGTGTTCCTCA---TGTGCCCTGGTAGTT- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56919719 37 + 57149010 ACTGCTTCACAAGTCTTCCTCA---TGTGCCCTGGCAGTT- i micMur3.chr18 C 0 I 96 s proCoq1.NW_012150197v1 1910066 37 - 2029793 CCTGCTCCACACGCCTTCTTCA---TGTGCCCTGGCAGTT- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22900890 33 + 22939663 GCTGCTCCCTGAGTC----TCA---TGTGCCCCGGCAACC- i otoGar3.GL873542 C 0 I 4 s mm10.chr2 181839085 28 + 182113224 GCTGCTC----AGTTTTTTTCC---TATGCCCTTT------ i mm10.chr2 I 108 C 0 s canFam3.chr24 47651682 33 + 47698779 GCTGCCCCTC------CCCCCACACTGTG-CTTGGCAGTT- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319095 36 - 397369 GCTACTCG--AAGGCATCTTCC---TGTGCCCTTGCAAGCT i dasNov3.JH569290 C 0 C 0 a score=991344.000000 s hg38.chr20_KI270870v1_alt 165927 90 + 183433 CGCATTGTAAGGAGCAGC--CAGGTTGTTA---TGGACTGT-TGCTAGTTACCACAGAGTAGTGAAT------TATATTAAGGATTAATTACAGC----AGACAAT s panTro5.chr20 66501351 90 + 66533130 CGCATTGTAAGGAGCAGC--CAGGTTGTTA---TGGACTGT-TGCTAGTTACCACAGAGTAGTGAAT------TATATTAAGGATTAATTACAGC----AGACAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168571 90 + 62195757 CGCATTGTAAGGAGCAGC--CAGGTTGTTA---TGGACTGT-TGCTAGTTACCACAGAGTAGTGAAT------TATATTAAGGATTAATTACAGC----AGACAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 554993 88 - 578057 CGCATTGTAAGGAGCAGC--CAGGTTGTTA---TGGAC--T-TGCTAGTTACCACCGAGTAGTGAAT------TATATTAAGGATTAATTACAGC----ACACAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076487 90 - 110113093 GGCATTGTAAGGAGCAGC--CAGGTTGTCA---TGGACTGT-TGCTAGTTACCACAGAGTAGTGAAT------TATATTAAGGATTAATTACAGC----AGACAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816297 90 - 92844088 GGCATTGTAAGGAGCAGC--CAGGTTGTCA---TGGACTGT-TGCTAGTTACTACAGAGTAGTGAAT------TATAGTAAGGATTAATTACAGC----AGATAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96481967 90 + 96509753 GGCATTGTAAGGAGCAGC--CAGGTTGTCA---TGGACTGT-TGCTAGTTACTACAGAGTAGTGAAT------TATAGTAAGGATTAATTACAGC----AGATAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16951910 90 - 16982598 GGCATTGTAAGGAGCAGC--CAGGTTGTCA---TGGACTGT-TGCTAGTTACTACAGAGTAGTGAAT------TATAGTAAGGATTAATTACAGC----AGATAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753903 90 - 3785965 GGCATTGTAAGGAGCAGC--CAGGTTGTCA---TGGACTGT-TGCTAGTTACTACAGAGTAGTGAAT------TATAGTAAGGATTAATTACAGC----AGATAAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343711 90 - 90373283 GGCATTGTAAGGAGCAGC--CAGATTGTCA---TGGACTGT-TGCTAGTTACTACAGAGTAGTGAAT------TATAGTAAGGATTAATTACAGC----AGATAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144618 90 - 179258 GGCATTGTAAGGAGCAGC--CAGGTTGTCA---TGGACTGT-TGCTAGTTACTACAGAGTAGTGAAT------TATAGTAAGGATTAATTACAGC----AGATAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614023 90 - 5823884 GGCATTGTAAGGAGCAGC--CAGGTTGTCA---TGGACTGT-TGCTAGTTACTACAGAGGAGTGAAG------TATAGTAAGGATTAATTACAGC----AGATAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99062 86 + 372756 GGTATTTTAAGGAGCAGC--AAGGTTGTTA---TGGACTGC-TGCTAGTTACTGCAGAGGAGTGAAT------AATATTAAGG----ATTACAGC----AGATAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332882 86 + 16356641 GATATTGTAAGGAGCAGC--AAGGTTGTTA---CGGACTGC-TGCTAGTCACTGCAGAGCAGTGAAT------GACATTAAGG----ATTTCAGC----AGATAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207169 86 + 1231380 GGTATTGTAAGGAGCAGC--AAGGCTGTTA---TGGACTGT-TGCTAGTCACTGAAGAGCAGTGAAT------AATACTAAGG----ATTACAGC----AGATAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734823 86 + 11732439 GGTATTGTAAGGAGCAGC--AAGGTTGTTA---TGGACTGC-TGCTAGTTACTGCAGAGCAGTGAAT------AATAGTAAGG----ATTACAGC----AGATGAT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1910103 95 - 2029793 GGTATTGGAAGGAGCGGT--AAGGTTGTCCTGTTGGACTGT-GGCTAGTTAGTACCGAGTAGTGAACTATATTCATATTAGGG----ATTACAGC----AAATAAT i proCoq1.NW_012150197v1 C 0 I 3 s otoGar3.GL873542 22900927 95 + 22939663 AATATTGGAAGGAGCAGT--AACGCTGTTTTGTTGGACTGT-GGCCAGTTAGTACAGAGTAGTGAAT----TTTACATCAGAG----ATTACAGCACAAAAATAAA i otoGar3.GL873542 I 4 C 0 s mm10.chr2 181839113 64 + 182113224 ----------------------TCTTCTGT---TGGCCTGT--GCTAATCAGTTCTGAATGG-GAAC------TGTAATAAGC----ATTACAGC----AAGTAGC i mm10.chr2 C 0 I 5 s canFam3.chr24 47651715 77 + 47698779 GGTTTTGGAAGGAGCAGT--ACGATAGTAA-GGTGTCCTGTGGGCCAGTTACC-CAGAGTGGTGAAT------TACATTGAGG----TTTA--------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319131 81 - 397369 GTTTTTGGAAAGAGCAGTGAAACGTCCTGT---TGAGCTGT-GGCCAGTTAATACAGAGTAGTGGAT------TGTATTGAGG----TTTGCAAA----------- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56919756 96 + 57149010 I a score=607455.000000 s hg38.chr20_KI270870v1_alt 166017 41 + 183433 GTGCAC-AGTATC-------ATCG-------AGTGCAGCGTTCTAAAAA-TGATTCT s panTro5.chr20 66501441 41 + 66533130 GTGCAC-AGTATC-------ATCG-------AGTGCAGCGTTCTAAAAA-TGATTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168661 41 + 62195757 GTGCAC-AGTATC-------ATCG-------AGTGCAGCGTTCTAAAAA-TGATTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555081 41 - 578057 GTGCAC-AGTATC-------ATCG-------AGTGCAGCGTTCTGAAAA-TGATTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076577 38 - 110113093 GTGCAC-AGT----------ATCG-------AGTGCAGCATTCTAAAAA-TGATTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816387 41 - 92844088 GTGCAC-AGTATC-------ATCG-------AGTGCAGCATTCTAAAAA-TGATTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482057 41 + 96509753 GTGCAC-AGTATC-------ATCG-------AGTGCAGCATTCTAAAAA-TGATTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952000 41 - 16982598 GTGCAC-AGTATC-------ATCG-------AGTGCAGCATTCTAAAAA-TGATTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3753993 41 - 3785965 GTGCAC-AGTATC-------ATCG-------AGTGCAGCATTCTAAAAA-TGATTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343801 41 - 90373283 GTGCAC-AGTATC-------ATCG-------AGTGCAGCATTCTAAAAA-TGATTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144708 41 - 179258 GTGCAC-AGTATC-------ATCG-------AGTGCAGCATTCTAAAAA-TGATTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614113 41 - 5823884 GTGCAC-AGTATC-------ATCG-------AGTGCAGCATTCTAAAAA-TGATTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99148 40 + 372756 TTGCAC-AGTATA-------ATCG-------AGTGCAGCATTCTGAAAA--GATTCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16332968 42 + 16356641 GTGCACTGGTGTA-------ATCG-------AGTCCAGCATTCTAAAAA-TGATTAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207255 41 + 1231380 GTGCAC-GGTATA-------ATCG-------AGTCCAGCATTCTAAAAA-TGATTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734909 41 + 11732439 GTGCAC-AGTATG-------ATCG-------AGTCCAGCATTCTAAAAA-TGATTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56919852 41 + 57149010 GTGCAA-AGTATC-------ATCA-------AGTGCAGCATCCTAAAAA-TGATTCT i micMur3.chr18 I 96 I 135 s proCoq1.NW_012150197v1 1910201 41 - 2029793 GTGCAA-AGTATA-------ATCA-------AGTGCAGCATCCTAAAAA-TGATTCT i proCoq1.NW_012150197v1 I 3 C 0 s otoGar3.GL873542 22901022 41 + 22939663 GTGCCA-AGTATA-------CTCA-------AGTGTAGCATCCTAAAAA-TGATTCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181839182 49 + 182113224 GTGTAT-CGTAGG-------GTAGTAAAGGAAGGACAATCTCCTAAAAAATAGTTCT i mm10.chr2 I 5 C 0 s canFam3.chr24 47651792 37 + 47698779 ---CAA-AGTATA-------ATCA-------AGTACAGCATCCAAAAAT-TATTTC- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319212 48 - 397369 ATGTAC-TACATCTTTAAAAATGA-------AGTGCAGCATCCTAAAAA-TGATTCA i dasNov3.JH569290 C 0 C 0 a score=916482.000000 s hg38.chr20_KI270870v1_alt 166058 77 + 183433 ACACTTTTACTTTGAAAAATTGGATTTGACCAGATT-----GTAGAATCTGGGTGAAAATGATAGGATTTGGTTTGGC-GAAG s panTro5.chr20 66501482 77 + 66533130 ACACTTTTACTTTGAAAAATTGGATTTGACCAGATT-----GTAGAATCTGGGTGAAAATGATAGGATTTGGTTTGGC-GAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168702 77 + 62195757 ACACTTTTACTTTGAAAAATTGGATTTGACCAGATT-----GTAGAATCTGGGTGAAAATGATAGGATTTGGTTTGGC-GAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555122 71 - 578057 AC------ACTTTGAAAAATTGGATTTGACCAGATT-----GTAGAATCTAGGTGAAAATGATAGGATTTGGTTTGGC-GAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076615 77 - 110113093 ACACTTCTACTTTGAAAAATTGGATTTGACTAGATT-----GTAGAATCCAGGTGAAAATGATAGGGTTTGGTTTGGT-GAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816428 71 - 92844088 AC------ACTTTGAAAACTTGGATTTGACTAGATT-----GTAGAATCTAGGTGAAAATGATAGGATTTGGTTTGGC-AAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482098 71 + 96509753 AC------ACTTTGAAAACTTGGATTTGACTAGATT-----GTAGAATCTAGGTGAAAATGATAGGATTTGGTTTGGC-AAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952041 71 - 16982598 AC------ACTTTGAAAACTTGGATTTGACTAGATT-----GTAGAATCTAGGTGAAAATGATAGGATTTGGTTTGGC-AAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754034 71 - 3785965 AC------ACTTTGAAAACTTGGATTTGACTACGTT-----GTAGAATCTAGGTGAAAATGATAGGATTTGGTTTGGC-AAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343842 71 - 90373283 AC------ACTTTGAAAACTTGGATTTGACTAGATT-----GTAGAATCTAGGTGAAAATGATAGGATTTGGTTTGGC-AAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144749 71 - 179258 AC------ACTTTGAAAACTTGGATTTGACCAGATT-----GTAGAATCTAGGTGAAAATGATAGGATTTGGTTTGGC-AAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614154 77 - 5823884 ACACTTTTACTTTGAAAAATTGGATTTGACTAGATT-----GTAGAATCTAGGTGAAAATGATAGGATTTGGTTTGGC-AAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99188 71 + 372756 AC------ACTTTGAAAAATTGGATTTGACTGGATT-----GTAGAATCTAGGTGAAAATGATAGGATTTGGTTTTGC-AAGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16333010 78 + 16356641 ACACTTTTACTTTGAAAAACTGGATTTGACTGGATT-----GTAGAACCTAGGTGAAAATGATAGGATTTGGTTTTGCAAAAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207296 77 + 1231380 ACACTTTTACTTTGAAAAACTGGATTTGACTGGATT-----GTAGAATCCAGGTGAAAGTGATAGGATTTGGTTTTGC-AAAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2734950 77 + 11732439 GCACTTTTACTTTGAAATTTTGGATTTGACTGGATT-----GTAGAATCTAGGCGAAAATGATAGGATTTGGTTTTGC-GAAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1910242 68 - 2029793 ---CCACCAATTC------TTGGATTTTACTGGATT-----GTAGAATCTAGGTGAAAGTGATAGTATTTGCTTTGGC-AAAG i proCoq1.NW_012150197v1 C 0 I 394 s otoGar3.GL873542 22901063 79 + 22939663 ---CTACCAATCTGAAAAATTGGATTTGACTGGATTGTATAGTAGATTCTAGGTGAAAGTGGTATTATTTGGTTTGGC-AAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181839231 64 + 182113224 ------TTGCTTTCAG---TTGGAATCTACTGCACT-----GCA---TTCTTGTG-CAGTGATACTGTTTGGTTTGGA-GAGA i mm10.chr2 C 0 I 21 s canFam3.chr24 47651829 57 + 47698779 ---CCATTACTTGGGACAATTGGATTTGACTAGATT--------AGATCCAG--------------ATTTGTTTTGGC-AAGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319260 70 - 397369 CTACCATAACTTTGAAAAATTGGATTTAACTGGGTT-----GTAGAATCTAGGTGA-------AGGATTTAGTTTGAC-AAGG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56919893 135 + 57149010 I a score=398337.000000 s hg38.chr20_KI270870v1_alt 166135 45 + 183433 AGC-------------TTTGTTGTCGGTG-----TTTTT-------GGTGACATCATGACTGATCATAT--------------------C s panTro5.chr20 66501559 45 + 66533130 AGC-------------TTTGTTGTCGGTG-----TTTTT-------GGTGACATCATGACTGATCATAT--------------------C i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168779 45 + 62195757 AGC-------------TTTGTTGTCGGTG-----TTTTT-------GGTGACATCATGACTGATCATAT--------------------C i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555193 49 - 578057 AGCTTA---------GTTTGTTGTCGGTG-----TTTTT-------GGTGACATCATGACTGATCACAT--------------------C i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076692 45 - 110113093 AGC-------------TTAGTTGTCGGTG-----TTTTT-------GGTGACATCATGACTGATCACAT--------------------C i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816499 65 - 92844088 AGC-------------TTAGTTGTCAGTG-----TTTTT-------GGTGACATCATGACTGATCACATCCACAGTCTGTTGTAAACAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482169 65 + 96509753 AGC-------------TTAGTTGTCAGTG-----TTTTT-------GGTGACATCATGACTGATCACATCCACAGTCTGTTGTAAACAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952112 65 - 16982598 AGC-------------TTAGTTTTCAGTG-----TTTTT-------GGTGACATCATGACTGATCACATCCACAGTCTGTTGTAAACAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754105 65 - 3785965 AGC-------------TTAGTTGTCAGTG-----TTTTT-------GGTGACATCATGACTGATCACATCCACAGTCTGTTGTAAACAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343913 65 - 90373283 AGC-------------TTAGTTGTCGGTG-----TGTTT-------GGTGACATCATGACTGATCACATCCACAGTGTGTTGTAAACAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144820 65 - 179258 AGC-------------TTAGTTGTCAGTG-----TTTTT-------GGTGACATCATGACTGATCACATCCACAGTCTGTTGTAAACAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614231 65 - 5823884 GGC-------------TTAGTTGTTGGTA-----TTTTT-------GGTGACATCATGACTGATCACAGCCACAGTCTGTTGTAAACAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99259 66 + 372756 AGCTTA---------GTTTGTTGTCAGTG-----TTTTT-------GGTGAC---ATGACTGATCACATCCACAGTCTGTTGTTAACAGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16333088 69 + 16356641 AGCTTA---------GTTTGTTGTCAGTG-----TTTTT-------GGTGACATGATGACTGATCACATCTACAGTCTGTTGTTAACAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207373 69 + 1231380 AGCATA---------GTTTGTTGTCAGTG-----TTTTT-------GGTGACATGATGACTGATCACATCCACAGTCTGTTGTTAACAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2735027 69 + 11732439 AGCTTA---------GTTTGTTGTCAGTG-----TTTTT-------GGTGACGTGATGACTGATCACATCCACAGTCTGTTGTTAACAGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22901142 48 + 22939663 ---GTAT------CTGTTTG-TGTTAGTA-----TTTTT-------GGTGACATCATAAATGATCAAATC-------------------- i otoGar3.GL873542 C 0 I 20 s mm10.chr2 181839316 40 + 182113224 ------------------GGCTTTCTTTC-----TTTCT-------TTTGACATGGTGACTGATCACATC-------------------- i mm10.chr2 I 21 I 19 s canFam3.chr24 47651886 36 + 47698779 --------------------------ATA-----TCTTTGAACCTGGGTGGGTCAGTAACAAGTAGT----------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319330 62 - 397369 ------AAATCTTTTGTCTGTTGTTGGTAATTTTTTTTT-------GGTGACATCA---------------GTAGTTGGTAGTGAGTGGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1910310 394 - 2029793 I e micMur3.chr18 56919893 135 + 57149010 I a score=466015.000000 s hg38.chr20_KI270870v1_alt 166180 33 + 183433 GATGGTTTTCAGTGCGAGGGAGTGTTAGATTAC s panTro5.chr20 66501604 33 + 66533130 GATGGTTTTCAGTGCGAGGGAGTGTTAGATTAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168824 33 + 62195757 GATGGTTTTCAGTGCGAGGGAGTGTTAGATTAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555242 33 - 578057 GATGGTTTTCAGTGCGAGGGAGTGTTAGATTAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076737 33 - 110113093 GATGGTTTCCAGTGTGAGGGAGTGTTAGATTAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816564 33 - 92844088 GATGGTTTCCAGCGTAAGGGAGTGTTAGATTAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482234 33 + 96509753 GATGGTTTCCAGCGTAAGGGAGTGTTAGATTAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952177 33 - 16982598 GATGGTTTCCAGCGTAAGGGAGTGTTAGATTAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754170 33 - 3785965 GATGGTTTCCAGCGTAAGGGAGTGTTAGATTAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90343978 33 - 90373283 GATGGTTTCCAGTGTAAGGGAGTGTTAGATTAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144885 33 - 179258 GATGGTTTCCAGCGTAACGGAGTGTTAGACTAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614296 33 - 5823884 GATGGTTTCCAGCGTAAGGGAGTGTTAGATTAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99325 33 + 372756 CCTGGTTTCCAGTGTGAGGGAGTGTTAGATTAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16333157 33 + 16356641 CATGGTTTCCAGTGTGAGGGAGTGTTAGATTAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207442 33 + 1231380 CATGGTTTACAGTGTGAGGGAGTGTTAGATTAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2735096 33 + 11732439 CATGGTTTCCAGTGTGAGGGAGTGTTAGATTAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56920028 33 + 57149010 GATGGTTTCCAGTGGGAGGGAGTATTAGATTAC i micMur3.chr18 I 135 I 298 s otoGar3.GL873542 22901210 33 + 22939663 GATGGTTTCTGGTGTGAGGGAGTGTTACATTAC i otoGar3.GL873542 I 20 C 0 s mm10.chr2 181839375 31 + 182113224 GATGCTT--CTATGCAAGGCAATATTAGATTGT i mm10.chr2 I 19 C 0 s canFam3.chr24 47651922 33 + 47698779 GATGGCGTTCAGTGTGAGGGAGTGATAGATGAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319392 28 - 397369 AATTATTTCTAGGGTGAGGGCATATTGC----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1910310 394 - 2029793 I a score=1141882.000000 s hg38.chr20_KI270870v1_alt 166213 109 + 183433 CAGACAAAGATGGTAATAAA---TATCAGACCCCACAGCTATTCACATGGATCCTACCAGTGGCAATAGGTATAGATAGGGTTACCCCATCGTCA-------------------------AAAGGTTACCGGTGTGT s panTro5.chr20 66501637 109 + 66533130 CGGACAAAGATGGTAATAAA---TATCAGACCCCACAGCTATTCACATGGATCCTACCAATGGCAATAGGTATAGATAGGGTTACCCCATCGTCA-------------------------AAAGGTTACCGGTGTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168857 109 + 62195757 CGGACAAAGATGGTAATAAA---TATCAGACCCCACAGCTATTCACATGGATCCTACCAATGGCAATAGGTATAGATAGGGTTACCCCATCGTCA-------------------------AAAGGTTACCGGTGTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555275 109 - 578057 CAGACAAAGATGGTAATAAA---TATCAGACCCCACAGCTATTCACATGGATCCTACCAATGGCAATAGGTATAGATAGGGTTACCCCATCGTCA-------------------------AAAGGTTACCAGTGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076770 109 - 110113093 CAGACAAAGATGGTAATAAA---TATCAGACCCCACAACTATTCACATGGATCCTACCAATGGCAGTAGGTATAGATAGGGTTACCCCCTCGTCA-------------------------AAAGATTACCAGTGTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816597 109 - 92844088 CAGACAAAGATGGTAATAAA---TGTCAGACCCTACAGCTATTCACATGGATCCTACCAATGGCAATAGATATAGATGGGGTTGCCCCATAGTCA-------------------------AAAGGTGACTGGTGTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482267 109 + 96509753 CAGACAAAGATGGTAATAAA---TGTCAGACCCTACAGCTATTCACATGGATCCTACCAATGGCAATAGATATAGATGGGGTTGCCCCATAGTCA-------------------------AAAGGTGACTGGTGTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952210 109 - 16982598 CAGACAAAGATGGTAATAAA---TGTCAGACCCTACAGCTATTCACATGGATCCTACCAATGGCAATAGATATAGATGGGGTTGCCCCATAGTCA-------------------------AAAGGTGACCGGTGTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754203 105 - 3785965 ----CAAAGATGGTAATAAA---TGTCAGACCCCACAGCTATTCACATGGATCCTACCAATGGCAATAGATATAGATAGGGTTGCCCCATAGTCA-------------------------AAAGGTTACCGGTGTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344011 108 - 90373283 CAGACAAAGATGGTAATAAA---TGTCAAA-CCCAAAGCTATTCACATGGATCCTACCAATGGCAGTAGATATAGATAGGGTTGCCCCATAGTCA-------------------------AAAGGTTACCGGTGTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 144918 109 - 179258 CAGACAAAGATGGTAATAAA---TGTCAGACCCCACAGCTATTCACATGGATCCTACTAATGGCAATAGATATAGATAGGGTTGCCCCATAGTCA-------------------------AAAGGTTACCGGTGTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614329 109 - 5823884 CAGACAAAAATGGTAATAAA---TGTCAGACCCCACAGCTATTCACATGGATCCTACCAATGGCAATAGATACAGAAAGGGTTGCCCCATAGTCA-------------------------AAAGATTACCGGTGTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99358 108 + 372756 CAGGCAAAGATGGTAATAAA---TATCAGA-CCCACAGATATTCACATTCACCCTACCATTGGCAATAGGTATAGATAGGATTACCCCATAGTCA-------------------------AAGGATTACCAAAGTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16333190 108 + 16356641 CAGGCAAAGATGGTAATAAA---TGTCAGA-CCCACAGATATGCACATGCACCCTACCGATGGCAATAGATACAGATAGGATTACCCCATAGTCA-------------------------AAAGATTACCAAAGCGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207475 108 + 1231380 CAGGCAAAGATGGTAATAAA---TATCAGA-CCCACAGATATTCACATGCACCCTACCAATGGCAATAGATATAGATAGGATTATCCCATAGTCA-------------------------AAAGATTACCAAAGTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2735129 108 + 11732439 CAGGCAAAGGTGGTAATAAA---CATCAGA-CCCACAGATATTGACATGCGTCCTACCAATGGCAATAGATACAGATAGGATTACCCCATAGTCA-------------------------AAAGATTACCAAAGTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22901243 96 + 22939663 CAGG-AAAGCTAATAATAAT---CATTAGATTCTATAGATGTTCTCATGTATCCTACCAATGGCAAT------AGATAGGCTTACTCCGTAGTTA-------------------------AAAGATGAGCT------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181839406 86 + 182113224 CAGACAAAGCTAATACTAAG---TACCACACTCTATCATTATTCACCCACTCTCCACCAAAAGCAAT------TGATAGGGCTACCTTGGTGTTC------------------------------------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47651955 117 + 47698779 CTGGCAAAGTTAATATTC-------TCAGACCCCGTAGATGGTGACAC--ATCCTACCAATGGCAAC------AGAGAGGGTGACCATGTTGTTAATTAGTCTGTCATGTGGG-----GCAAAGATTACCAACATGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319420 125 - 397369 CAGGCAAAG----CACCAGATCCTATCAGGCCTCCCAGATGTTCACATGTATCTTAACAGTGGCAA-------AGACAGGTTTACCTCATAGTCATTTAATCTATCATTTCAGAATAAACAAAGATTACTAAAAGT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1910310 394 - 2029793 I e micMur3.chr18 56920061 298 + 57149010 I a score=143936.000000 s hg38.chr20_KI270870v1_alt 166322 8 + 183433 TGTGTGGT s panTro5.chr20 66501746 8 + 66533130 TGTGTGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168966 8 + 62195757 TGTGTGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555384 8 - 578057 CGTGTGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076879 8 - 110113093 TGTGTGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816706 8 - 92844088 TGTGTGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482376 8 + 96509753 TGTGTGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952319 8 - 16982598 TGTGTGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754308 8 - 3785965 TGTGTGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344119 8 - 90373283 TGTGTGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145027 8 - 179258 TGTGTAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614438 8 - 5823884 CGTGTGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99466 8 + 372756 TGTGTGAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16333298 8 + 16356641 TGTGTGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207583 8 + 1231380 TGTGTGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2735237 8 + 11732439 TGTGTGGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56920359 8 + 57149010 TGTGTGGT i micMur3.chr18 I 298 C 0 s proCoq1.NW_012150197v1 1910704 8 - 2029793 TGTGTGGT i proCoq1.NW_012150197v1 I 394 C 0 s otoGar3.GL873542 22901339 8 + 22939663 TGTATGGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181839492 8 + 182113224 TGTGTAGT i mm10.chr2 C 0 I 756 s canFam3.chr24 47652072 8 + 47698779 TACGTGTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319545 8 - 397369 TATATAGT i dasNov3.JH569290 C 0 C 0 a score=2899019.000000 s hg38.chr20_KI270870v1_alt 166330 212 + 183433 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ctggtgtggtattaaaaacacaggccttttgccatacagtcctgggtttgaatgc-ag-cccc-ctcctcacaaactggct-atgtgatcatgaacaaattaaccggccagctccaatttgctTCTTAATGTTGTGAAGTGTAAATGAGGCCATGACTGGCAGGTGGTACCTGGAAAA s panTro5.chr20 66501754 212 + 66533130 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggccttttgccatacagtcctgggtttgaatgc-ag-cccc-ctcctcacaaactggct-atgtgatcatgaacaaattaaccggccagctccaatttgctTCTTAATGTTGTGAAGTGTAAATGAGGCCATGACTGGCAGGTGGTACCTGGAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62168974 212 + 62195757 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggccttttgccatacagtcctgggtttgaatgc-ag-cccc-ctcctcacaaactggct-atgtgatgatgaacaaattaaccggccagctccaatttgctTCTTAATGTTGTGAAGTGTAAATGAGGCCATGACTGGCAGGTGGTACCTGGAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555392 212 - 578057 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ctggtatggtattaaaaacacaggccttttgccatacagtcctgggtttgaatgc-ag-cccc-ctcctcacaaactggct-atgtgatcatgaacaaattaaccggccagctccaatttgctTCTTAATGTTGTGAAGTGTAAATGAGGCCATGACTGGCAGGTGGTACCGGGAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110076887 213 - 110113093 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCCGCA--Ctggtgtggtattaaaaacacaggccttttgccatagagtcctgggtttgaatgc-ag-cccctctcctcacaaactggct-atgcgatgatgaacaaattaaccggccagctccaatttgctTCTTAATGTTGTGAAGTGTAAATGAGGCCAGGACTGGCAGGTGGTACCTGGAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816714 213 - 92844088 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ttggtgtggtagtaaaaacacaggcctgttgccatacagtcctgggtttgaattc-ag-cccc-ctcctcacaaattggctgacgtgatcatgaacaaattaactggccagctccaatttgctccttaatgttgtgaagtgtaaatgaGGCCATGACTGGCAGGTGGTACCTGGAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482384 213 + 96509753 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggcctgttgccatacagtcctgggtttgaattc-ag-cccc-ctcctcacaaattggctgacgtgatcatgaacaaattaactggccagctccaatttgctccttaatgttgtgaagtgtaaatgaGGCCATGACTGGCAGGTGGTACCTGGAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952327 213 - 16982598 AAAGAACGTTGCTGTCTTGAGTATTATTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggcctgttgccatacagtcctgggtttgaattc-ag-cccc-ctcctcacaaattggctgacgtgatcatgaacaaattaactggccagctccaatttgctccttaatgttgtgaagtgtaaatgaggCCATGACTGGCAGGTGGTACCTGGAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754316 213 - 3785965 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggcctgttgccatacagtcctgggtttgaatcc-ag-cccc-ctcctcacaaattggctgacgtgatcatgaacaaattaactggccagctccaatttgctccttaatgttgtgaagtgtaaatgaggCCATGACTGGCAGGTGGTACCTCGAAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344127 213 - 90373283 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggccttttgccatacagtcctgggtttgaatcc-ag-cccc-ctcctcacaaactggctgacgtgatcatgaacaaattaactggccagctccagttggcttcttaatgttgtgaagtgtaaatgaGGCCATGACTGGCAGGTGGTACCTGGAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145035 213 - 179258 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggcctgttgccatacagtcctgggtttgaatcc-ag-cccc-ctcctcacaaattggctgacgtgatcatgaacaaattaactggccagctccaatttgctccttaatgttgtgaagtgtaaatgaggCCATGACTGGCAGGTGGTACCTGGAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614446 213 - 5823884 AAAGAACGTTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggccttttgccatacagtcctgggtttgaatcc-ag-cccc-ctcttcacaaactggctgacgtgatcatgaacaaattaactggccagctccaatttgctTCTTAATGTTGTGAAGTGTAAATGAGGCCATGACTGGCAGGTGGTACCTGGAAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99474 207 + 372756 AAAGAACATTGCTGTCTTGAGTATTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggccttttgccatacagtcctgggtttgaatcc-ag-tgcc-ctcctcacaaact-----gtgtaatcatgaacaaattaaccaactagctccagtttgcctcTTAGTGTTGCGA-CTCTGAATGAGGCCATGACTGACAGGTGGTACCTGGAAAA i calJac3.chrUn_GL286459 C 0 I 1 s saiBol1.JH378156 16333306 208 + 16356641 AAAGAACATCGCTGCCTTAAATATTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggccttttgctgtacagtcctgggtttgaatcc-ag-tgcc-ctcctcacaaact-----gtgtaatcgtgaacaaattaaccaactagctccagtttgcctcttagtgttgcgacctgtgaatgaggCCATGACTGACAGGTGGTACCTGGAAAA i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1207591 200 + 1231380 AAAGAACATTGCTGTCTTGAGTATTTTTA--------C--TTGgcatggtattagaaacacaggctttttgctgtacagccctgggtttgaatcc-ag-tgcc-ctcctcacaaact-----gtgtgatcgtgaacaaatgaaccgaccagctccagtttGCCCCTTAGTGCTGCGATGTGTGAATGAGGCCGTGACGGAGAGGTGGGTCCTAGAAAA i cebCap1.NW_016107870v1 C 0 I 11 s aotNan1.NW_018500483v1 2735245 208 + 11732439 AAAGAACATTGCTGTCTTGAGTGTTTTTAAAAGCTGCA--Ttggtgtggtattaaaaacacaggccttttgccatacagtcctgggtttgaatcc-ag-tgcc-cgcctcacaaact-----gtgtaatcatgaacaaattaaccgactcgctccagtttgcctcTTAGTGTTGGCACGTGTGAATGAGGCCATGACTGGCAGGTGGTACCTGGAAAA i aotNan1.NW_018500483v1 C 0 I 1 s micMur3.chr18 56920367 208 + 57149010 AAAAAATGTTGCTCTTTTGAGAATTTTTATAAGCTCCA--Ttg--gtggtataaagaacacaggcccttagctggacagtcctgggtttgaatcc-tg---cc-cccatcacacactggct-gtgtgatcatgagcaaattcattgcccaccttcagtttgcctccttacgttgtgaagtTTAAATGAGGCTGTGGCTGGCAGGTGGTACTTGTAAAA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1910712 210 - 2029793 AAAAAATGTTGCTCTTTTGAGAATTTTTAAAAGCTGCA--Ttggtgtggtataaagaacacaggcccctagccagacagtcgtgggtttgaatcc-ag---cc-ctcctcacgcactggct-ttgtggtcatgagcaaattcattgcccgccttcagtttgcctccttatgttgtgaagtTTAAATGAGGCTGTGGCTGGCAGGTGGTACCTGTACAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22901347 164 + 22939663 AAAAAATGTTGCT-TTTTGAAAATTTTTAAAAGCTGTA------------------------------------------------TCTAAATCC-AG-CTCC-CTCCTCATCAGCTGGCT-ATGTAGTCATGAGCAAATTAATTGCCCACC-TCAATTTGCCTCATAATATTGTAAAGTTTAAATGAGATTGTGGATGGTAAGGGGTACCTGTAAAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181840256 198 + 182113224 AAAGAATGGTGTTCTTTTGTGAGTCTTTAACACCTGTA--TCCATATTGTGTACAAAACAAAAGCCTTTGGCTAAACAGTGCTGG-TTTTACCAC-AG------CTCCTCTGGCAGT-----CTGTGACTGTGAGCAGTTTAGTAACTCAGA-CCAGCTTGCCTT---ACCTTCTGATGT-TCAATGTAGTGCTGTCTGGTAGGTAGTAGCTATAAAA i mm10.chr2 I 756 I 2 s canFam3.chr24 47652080 183 + 47698779 ACAGAAGGTTTTTCCTTTGGGAATTTTTAAAAGCTGCA-TTtggtgtggggtaaagaatggaggcctttggctagacagtcctgggtttgaattctgg-cttt-cccttcgcacacaggt--gtgtgatcatgagcaaaataactgcttggtcccaatttacctc-------catgacctc---------ctgtgactgggaga-------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319553 208 - 397369 CAAGAATTTTGTTCATTTGAGAATTTTTTAAAGCTGCATTTtggtgtggtgtaaagaacacaggtctttgggcagactatcctgtgtttgaattc-tgatgct-ctc-------gctggct-atgtgatcatgagcaaattaacctcttggccccaatttcctTCATTATGTTGTAAAGCCTAAATGTGGTCCAGATTGGCAGGTAGTACCTGTAAAA i dasNov3.JH569290 C 0 C 0 a score=59429.000000 s hg38.chr20_KI270870v1_alt 166542 7 + 183433 AGGTGCT s panTro5.chr20 66501966 7 + 66533130 AGGTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169186 7 + 62195757 AGGTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555604 7 - 578057 AGGTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077100 7 - 110113093 AGGTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816927 7 - 92844088 GGGTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482597 7 + 96509753 GGGTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952540 7 - 16982598 GGGTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754529 7 - 3785965 GGGTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344340 7 - 90373283 AGGTGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145248 7 - 179258 GGGTGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614659 7 - 5823884 AGGTGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99682 7 + 372756 ACTTGCT i calJac3.chrUn_GL286459 I 1 I 3 s saiBol1.JH378156 16333515 7 + 16356641 ACATGCT i saiBol1.JH378156 I 1 I 3 s aotNan1.NW_018500483v1 2735454 7 + 11732439 GCACGCT i aotNan1.NW_018500483v1 I 1 I 3 s micMur3.chr18 56920575 7 + 57149010 ATATGGT i micMur3.chr18 C 0 I 3 s proCoq1.NW_012150197v1 1910922 7 - 2029793 ATATGGT i proCoq1.NW_012150197v1 C 0 I 3 s otoGar3.GL873542 22901511 7 + 22939663 AGGTGGC i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181840456 7 + 182113224 AGGTGGC i mm10.chr2 I 2 I 16 s canFam3.chr24 47652263 7 + 47698779 ttgtaGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319761 7 - 397369 AGATGAT i dasNov3.JH569290 C 0 C 0 e cebCap1.NW_016107870v1 1207791 11 + 1231380 I a score=2314284.000000 s hg38.chr20_KI270870v1_alt 166549 178 + 183433 ----TGTTTTTACTAAAAAGCT--------------GTCTGAACTTTCAAATTAA-GGCAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAGTGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTACCTTCTAGAGAT------GTGGCATTGA--------------GAC--AATGTTGGAACAT-----TATATACAGGCTTCTGGGTGAAGAGG-TGGCTTT s panTro5.chr20 66501973 178 + 66533130 ----TGTTTTTACTAAAAAGCT--------------GTCTGAACTTTCAAATTAA-GGCAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAGTGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTACCTTCTAGAGAT------GTGGCATTGA--------------GAC--AATGTTGGAACAT-----TATATACAGGCTTCTGGGTGAAGAGG-TGGCTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169193 178 + 62195757 ----TGTTTTTACTAAAAAGCT--------------GTCTGAACTTTCAAATTAA-GGCAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAGTGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTACCTTCTAGAGAT------GTGGCATTGA--------------GAC--AATGTTGGAACAT-----TATATACAGGCTTCTGGGTGAAGAGG-TGGCTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555611 181 - 578057 ----TGTTTTTACTAAAAAGCT--------------GTCTGAACTTTCAAATTAA-GGCAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAGTGGAAAAT------GAACCCTATCCGACATACAGTTTGAGGGTTACCTTCTAGAGAT------GTGGCATTGA--------------GACAGAATGTTGGAACAT-----TATATACAGGCTTCTGGGTGAAGAGG-TGGCTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077107 180 - 110113093 ----TGTTTTTACTAAAAAGCT--------------GTCTGAACTTTCAAATTAA-GGCAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAGTGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTACCTTCTAAAGAT------GTGGCTTTGA--------------GACAGAATGTTGGAACAT-----TGTATACAGGCTTCCGGGTGAAGAGG-TGGCTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92816934 181 - 92844088 ----TGTTTTTACTAAAAAGCT--------------GTCCGAACTTTCCAGTTAAGGACAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAATGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTGCCTTCTAAAGAT------GTGGCATTGA--------------GACAGAATGTCAGAACAT-----TATATACAGGCTTCTGGGTGAGGAGG-TGGCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482604 181 + 96509753 ----TGTTTTTACTAAAAAGCT--------------GTCCGAACTTTCCAGTTAAGGACAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAATGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTGCCTTCTAAAGAT------GTGGCATTGA--------------GACAGAATGTCAGAACAT-----TATATACAGGCTTCTGGGTGAGGAGG-TGGCTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952547 181 - 16982598 ----TGTTTTTACTAAAAAGCT--------------GTCCGAACTTTCCAGTTAAGGACAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAATGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTGCCTTCTAAAGAT------GTGGCATTGA--------------GACAGAATGTCAGAACAT-----TATATACAGGCTTCTGGGTGAGGAGG-TGGCTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754536 181 - 3785965 ----TGTTTTTACTAAAAAGCT--------------GTCCGAACTTTCCAGTTAAGGACAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAATGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTGCCTTCTAAAGAT------GTGGCATTGA--------------GACAGAATGTCAGAACAT-----TATATACAGGCTTCTGGGTGAGGAGG-TGGCTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344347 180 - 90373283 ----TGTTTTTACTAAAAAGCT--------------GTCCGAACTTTCCAGTTAA-GACACAGTTC---AAAATAAGTGA----TAGTTA-CTTAATGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTGCCTTCTAAAGAT------GTGGCATTGA--------------GACAGAATGTCAGAACAT-----TATATACAGGCTTCTGGGTGAGGAGG-TGGCTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145255 181 - 179258 ----TGTTTTTACTAAAAAGCT--------------GTCCGAACTTTCCAGTTAAGGACAGAGTTC---AAAATAAGTAA----TAGTTA-CTTAATGGAAAAT------GAAACCTATCCAACATACAGTTTGA-GGTTGCCTTCTAAAGAT------GTGGCATTGA--------------GACAGAATGTCAGAACAT-----TATATACAGGCTTCTGGGTGAGGAGG-TGGCTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614666 180 - 5823884 ----TGTGTTTACTAAAAAGCT--------------GTCCGAACTTTCCAGTTAA-GACAGAGTTC---AAAATAAGTGA----TAGTTA-CTTAATGGAAAAT------GAAACCTATCCAACATGCAGTTTGA-GGTTGCCTTCTAAAGAT------GTGGCATCGA--------------GACAGAATGTCAGAACAT-----TATTTACAGGCTTCTGGGTGAGGAGG-AGGCTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99692 186 + 372756 ----TGTTTTTACTAAGAAGCG--------------GTCTGAACTTTCAAATTAA-GGAAGAGTTT---AAAATAAATGA----TAGTTA-CTTAGTAGAAAATGAAAATGAAACCTATCCAACATACAGTTTGC-GGATACCTTCTAAAGAT------GTGGTATTGA--------------GATAGAATGATAGAACAT-----TATATACAGGCTTGTGGATGCAGAGG-TGGCTTT i calJac3.chrUn_GL286459 I 3 C 0 s saiBol1.JH378156 16333525 183 + 16356641 ----TGTTTTTACTAAGAAGCC--------------ATCTGAACTTTCAAATTAA-GGAAGAGTTC---AAAATAAATGA----TAGTTA-CTTGGTAGAAAATGGAAATGAAACCTATCCAACATACAGTTTGC-GGATACCTTCTAAAGAT---------GTATTGA--------------GATAGAATGATAGAACAT-----TATATACAGGCTTCTGGCTGAAGAGG-TGGCTTT i saiBol1.JH378156 I 3 C 0 s cebCap1.NW_016107870v1 1207802 186 + 1231380 ----TGTTTTTACTAAGAAGCC--------------GTCTGAACTTTCAAATTAA-GGCAGAGTTC---AAAATAAATGA----TAGTGA-CTTAGTAGAAAATGAAAGTGAGACCTATCCAACATACAGTTTGT-GGATACCTTCTAAAGAT------GTGGTATTGA--------------GATAGGATGATAGAACGT-----TATATACAGGCTTCTGGGTGAAGAGG-TGGCTTT i cebCap1.NW_016107870v1 I 11 C 0 s aotNan1.NW_018500483v1 2735464 169 + 11732439 ----TGTTTTTACTAAGAAGCC--------------GTCTGAACTTTCAAGTTAA-GGAAGAGTTC---AAAATAAATGA----TAGTTA-CTTAGTAGAAAATGAAAACGAAACCTATCCCACATACAGTTTGC-GGATACCTTCTAAAGAC------GTGGTACTGA--------------GATAGA----------------------ACAGGCTTCTGGGTGAAGAGG-TGGCTTT i aotNan1.NW_018500483v1 I 3 C 0 s micMur3.chr18 56920585 200 + 57149010 ----TATTTTTACTAAAAAGCTTTCGTTTTGATATGGTATAAACTTTCAAATTGT-GGAAATGTTT---AAAATAAGTGG----TAGGTA-CTTAGTAGAAAAT------GAAACATACCCAATATACAGTTGGA-GGTTACCTTCTAAAGATAAAATGATGGTATTGA--------------GATAGAATGATAGAACTT-----TGTATATAGGCTTCTGGGTGGAGAGG-TAGCTTT i micMur3.chr18 I 3 I 29 s proCoq1.NW_012150197v1 1910932 196 - 2029793 ----TATTGTTACTAAAAAGCTTTCCTTTTGATACGGTATAAACTTTCAAATTGA-GACAATGTTT---AAAATAAGTGG----TACTTA-CTTAGTAGAAAAT------GAAACGTACCCAATATACAGTTGGA-GGTT-CCTTCTAAAGATAAA---ATGGTACTGA--------------GATAGAATGATAGAACTT-----TGTATACAGGCTTCTGGGTGGAGagg-tagcttt i proCoq1.NW_012150197v1 I 3 I 29 s otoGar3.GL873542 22901521 213 + 22939663 ----TCTT-TTACTAAAAACCTTTCTTTTTGATATGATCTAAACTTTCAGATTGA-GGAGATGTTT---AAAATAAGTGG----TAGGTG-CTTAGTAGAAAAT------GGAACATACCCAATATGTAGTTTGA-GGTCATTGTCTAAAAATAAAATGATAGTACTGAGATAGAACAGTTGGGATAGAACAATAGAGCTT-----TATATATAGGCTTCTGGGTGAACAGG-TAGCTTT i otoGar3.GL873542 I 3 I 10 s mm10.chr2 181840479 153 + 182113224 ----tattattaCTGGAATTCT-----TTTAATGTGGAATTAGCTTTTACTTCAGTAAAAAAATTCAGTAACATAAATGT----CTAGTA-C--------AAAT------GAAATATATCTAA---------TGT-GG-TACCTGCTGAAGATTAATTTATAGAACTGG--------------GATA----------------------------------GGGTGAAGAGGATGGCTTT i mm10.chr2 I 16 I 3 s canFam3.chr24 47652270 182 + 47698779 ----TCTTTTTACTAAAGTTCTAGCTTTTGGATAT-GAATAAACTTTCAAAGTGA-GGTGGAGTTG---AAAATAAGTGA----TAGATGTCTTAGTAGAAAAT------AAAATTTATCCAATCTATAGTTAGT-GTTCGCTTTCCAAAGATGGAATGATGGTATTGA--------------GATGGGATGGTAGAGCAT-----TATGCACATG-------------AGA-TC----- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 319768 205 - 397369 GGCTATTTTTTACTAAAAAGCTGACCTTAGGATAG-GAATAAGCTTTCAAAGTGA-GGGCAAATTC---AAAGTAAGTAAGTGCTAGATA-CTTAGTAGGAGGT------GAAGTAAACTCAATGTTC--------ATTTACCTTTTTAAGATAGAAAGATGGTATTGA--------------GGTGAGGTGAGACGGTGTGTGTGTAATTAAAGGCTTCTGGACAAAGAGG-TGGTTTT i dasNov3.JH569290 C 0 I 10 a score=164672.000000 s hg38.chr20_KI270870v1_alt 166727 20 + 183433 GACTGAGGACGGTATGCGAT- s panTro5.chr20 66502151 20 + 66533130 GACTGAGTACGGTGTGCGAT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169371 20 + 62195757 GACTGAGTACGGTATGCGAT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555792 20 - 578057 GACTGaggagggtatgcgat- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077287 19 - 110113093 GACTGAGGAGAGTATGCGA-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817115 19 - 92844088 GACTGAGGAGAGTATGTGA-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482785 19 + 96509753 GACTGAGGAGAGTATGTGA-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952728 19 - 16982598 GACTGAGGAGAGTATGTGA-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754717 19 - 3785965 GACTGAGGAGAGTATGTGA-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344527 19 - 90373283 GACTGAGGAGAGTATGTGA-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145436 19 - 179258 GACTGAGGAGAGTATGTGA-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614846 19 - 5823884 GACTGAGGAGGGTATGTGA-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99878 19 + 372756 CACTGAGTAGGGTATGTGA-- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16333708 19 + 16356641 CACTGAGTACGGTATGTGA-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1207988 19 + 1231380 CACTGAGCAGGGTATGTGA-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2735633 19 + 11732439 CACTGagtagggtatgtga-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22901744 19 + 22939663 CACTGAGTAGGAGTCAAGA-- i otoGar3.GL873542 I 10 I 1 s mm10.chr2 181840635 18 + 182113224 GATTATGTAGGACATGTG--- i mm10.chr2 I 3 C 0 s canFam3.chr24 47652452 19 + 47698779 CACCGTGGAAGCTGTGTGA-- i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 319983 20 - 397369 CATTCAATAGGATATGTGA-T i dasNov3.JH569290 I 10 C 0 e proCoq1.NW_012150197v1 1911128 29 - 2029793 I e micMur3.chr18 56920785 29 + 57149010 I a score=4126185.000000 s hg38.chr20_KI270870v1_alt 166747 279 + 183433 TTTCCAGCTCTTTTCCTAAATAGACCCTTAAGCATCCAAACACATGATTCCGCTTTTAACCACTGACCCAAATTTTAAGATGACTG-----TGGTAGGCTA-GGG-------TGCAGCCTCAGAACTGAGTGGCT--TATCCAGGATTAAAGTTGACCTCATTAGGACTTAATTCCATCTAAGTCTAAGTCAGCTGGCTGTGGACCGTAATCTAACAAGGGCTCCGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA s panTro5.chr20 66502171 279 + 66533130 TTTCCAGCTCTTTTCCTAAATAGACCCTTAAGCATCCAAACACATgattccgcttttaaccactgacccaaattttaagatgactg-----tggtaggcta-ggg-------tgcagcctcagaactgagtggct--tatccaggattaaagttgacctcattaggacttaattccatctaagtctaagtcagctggctgtggacTGTAATCTAACAAGGGCTCCGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169391 279 + 62195757 TTTCCAGCTCTTTTCCTAAATAGACCCTTAAGCATCCAAACACATgattccgcttttaaccactgacccaaattttaagatgactg-----tggtaggcta-ggg-------tgcagcctcagaactgagtggct--tatccaggattaaagttgacctcattaggacttaattccatctaagtctaagtcagctggctgtggacCGTAATCTAACAAGGGCTCCGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 555812 279 - 578057 tttccagctctttttctaaatagacccttaagcatccaaacacatgattccgcttttaaccactgacccaaattttaagatgactg-----tgctaggcta-ggg-------tgcagcctcagaactgagtggct--tatccaggattaaagttgacctcattaggacttaattccatctaagtctaagtcagctggctatggacCGTAATCTAACAAGGGCTCCGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077306 273 - 110113093 TTTCCAGCTCTTTTCCTAAATAGACCCTTAAGCATCCAAACACATGATTCCGCTTTTAACCACTGACCCAAATTTTAACATGACTG-----TGCTAGGCTA-GGG-------TGCAGCCTCAGAACTAAGTGGCT--TATCCAGGATTAAAGTTGACCTCATTAGGACTTAATTCCA------TCTAAGTCAGCTGGCTATGGACCATAATCTAACAAGGGCTCCGAAATAATTC-AAAAAATTCAAAAAGAGTGTGAAAATTTAATGACTGGACCATCCTGTTGATTTGCAAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817134 280 - 92844088 TTTCCAGCTCGTTTCCTAAATAGAACCTTAAGCATCCAAACACATgattccgcttttaaccactgacctaaattttaagatgactg-----tgccaggctagggg-------tgcagccacagagctaagtggct--tatccaggaataaacttgacctcattaggacttaattccatctaagtctaagtcaactggctgtggacCGTAATCTAACAAGGGCTCTGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96482804 280 + 96509753 TTTCCAGCTCGTTTCCTAAATAGAACCTTAAGCATCCAAACACATGATTCCGCTTTTAACCACTGACCTAAATTTTAAGATGACTG-----TGCCAGGCTAGGGG-------TGCAGCCACAGAGCTAAGTGGCT--TATCCAGGAATAAACTTGACCTCATTAGGACTTAATTCCATCTAAGTCTAAGTCAACTGGCTGTGGACCGTAATCTAACAAGGGCTCTGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16952747 280 - 16982598 TTTCCAGCTCGTTTCCTAAATAGAACCTTAAGCATCCAAACACATgattctgcttttaaccactgacctaaattttaagatgactg-----tgccaggctagggg-------tgcagccacagagctaagtggct--tatccaggattaaacttgacctcattaggacttaattccatctaagtctaagtcaactggctgtggacCGTAATCTAACAAGGGCTCTGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3754736 279 - 3785965 TTTCCAGCTCGTTTCCTAAATAGAACCTTAAGCATCCAAACACATgattctgcttttaaccactgacctaaattttaagatgactg-----tgccaggctagggg-------tgcggcctcagagctaagtggct--tatccaggattaaacttgacctcattaggacttaattccatctaagtctaagtcaactggctgtggacCATAATCTAACAAGGGCTCTGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGAACCATCCTA-TGATTTGCAAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344546 280 - 90373283 TTTCCAGCTCGTTTCCTAAATAGAACGTTAAGCATCCAAACACATGATTCCGCTTTTAACCACTGACCTAAATTTTAAGATGACTG-----TGCCAGGCTAGGGG-------TGCAGCCTCAGAGCTAAGTGGCT--TATCCAGGATTAAACTTGACCTCATTAGGACTTAATTCCATCTAAGTCTAAGTCAACTGGCTGTGGACCATAATCTAACAAGGGCTCTGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145455 280 - 179258 TTTCCAGCTCGTTTCCTAAATAGAACCTTAAGCATCCAAACACATgattctgcttttaaccactgacctaaattttaagatgactg-----tgccaggctagggg-------tgcagcctcagagctaagtggct--tatccaggattaaacttgacctcattaggacttaattccatctaagtctaagtcaactggctgtggacCATAATCTAACAAGGGCTCTGAAACAATTC-AAAGAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5614865 280 - 5823884 TTTCCAGCTCCTTTCCTAAATAGAACCTTAAGCATCCAAACACATgattcctcttttaaccactgacctaaattttaagatgactg-----tgccaggctagggg-------tgcagcctcagagctaagtggct--tatccaggattaaacttgacctcattaggacttaattccatctaagtctaaatcaactggctgtggacCATAATCTAACAAGGGCTCTGAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 99897 273 + 372756 TTTCCAGCTCTTTTCCTAAATAGATCCTTAAGCATCAAAACACCTGATTCCGCTTTTAACCACTGACCTAAATTTTAAGATGACTG-----TGTTAGGCTATGGG-------TGTAGCCTCAGAACTAAGTGGCT--TATCCAGGATTAAACTCGACCTCATTAGGACTTAATTCC-------TCTAAGTCAACTGGCTATGGACCGTAATCTAACAAGGGCTCCAAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16333727 280 + 16356641 TTTCCAGCTCTTTTCCTAAATAGATCCTTAAGTAGCCGAACGCCTGATTCCGCTTTTAACCACTGGCCTAAATTTTAAGATGACTG-----TGCTAGGCTATGGG-------TGTAGCCTCAGAACTAAGTGGCT--TATCCAGGATTAAACTCGACCTCATTAGGACTTAATTCC-TCTAAGTCTAAGTCAACTGGCTATGGACCATAATCTAACAAGGGCTCCAAAACAATTCAAAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208007 279 + 1231380 TTTCCAGCTCGTTTCCTAAATAGATCCTTAAGCATCCAAACACCTGATTCCGCTTTTAACCACTGACCTAAATTTTAAGATGACTG-----TGCTAGGCTATGGG-------TGTAGCCTCAGAACTCAGTGGCT--TATCCAGGATTAAACTCGACCTCATTAGGACTTAACTCC-TCTAAGTCTAAGTCAACTGGCTATGGACCATAATCCAACAAGGGCTCCAAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAGTTTAATGACTGGACCATCCTATTGATTTGCAAAA i cebCap1.NW_016107870v1 C 0 I 258 s aotNan1.NW_018500483v1 2735652 279 + 11732439 tttccagctcttttcctaaatagatccttaagcatccaaacacctgattccggttttaaccactgacctaaattttaagatgactg-----tgctaggctatggg-------tgtagcctcagaactaagtggct--tatccagtattaaactcgacctcattaggacttaattcc-tctaagtctaagtcaactggctatggacCTTAATCTAACAAGGTCTCCAAAACAATTC-AAAAAATTCAAAAAGGGTGTGAAAATTTAATGACTGGACCATCCTATTGATTTGCAAAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56920814 266 + 57149010 TTTCCAGGTCTTCTC---AATACACCC-TGAGCATCCAAACATATGACCCCGCTTTTAACCAGTGCCCGAAATTTTAAGGTGACTG-----AGCTAGACTA-GGG-------TATAGCCTcaaaactaaggggtttatatccaggattaaacttgacctcattaggacttaattccatctg--tctgagttaaccagccatggacCATAATCTAACAAGGGCTCTGAAACAACTT----------TAAAAGGCTGTGAAAATTGAGTAATTGGACCACCCTAATGATTTGAAAAA i micMur3.chr18 I 29 C 0 s proCoq1.NW_012150197v1 1911157 270 - 2029793 tttccaggtcttctcctaaatacaccc-tgaccatccatatgtatgactccgcttttaaccggtggcccaaattttacggtgactg-----agctagatcagggg-------tgtagcctcaaaacgaagtgatttatatccaggattaaacttgacctcattaggacttaattccatccg--tccgagttaactggccgtggacCATACTCTAACAAGGGCTCTGAAACAACTT----------TAAAAGGCTGTGAAAATTTAGTAATTGGAGCACCCCAGTGATTTGAAAAA i proCoq1.NW_012150197v1 I 29 C 0 s otoGar3.GL873542 22901764 267 + 22939663 -TTCTAAGTCTTCTC---AGTAGACCCTTGAGCTTGCAAACATAAGAGTCCTCTTTTAACCAGTGACCCAAATTTTAAGGGGACTG-----AGCTTGGCTAGGGT-------TGTAGCTTCAAAAGTAAGTGGTTAATATCTAAGATTAAACTTGACCTCATTAGGACTTAATTCCATCCA--TCTGAGTTAACTGGCCATGGACCATACTCTAACATGGGGTCTGAAACAACTT----------TAAAAGGCTGTGAAAATTTAATAATTGGACCACTCTAATGATTTGAAAAA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181840653 239 + 182113224 -TTAAAGGTTTTTTCCTAAACTGAGCTGTAAGCATATAAATACATTACTCTATTTTCAACTGGTGTCCCAAATTTTAATATGACTA-----TTTTAGATCAGTAG-------TGTAGCAATAGAACTAAGTGGCT--TATCTAAGATTAAGCCCAAGCTTATTAGCACTAGGGACTAGTTACAACTTAG------------------------GGCAAGGGCTCTGAATTCACTT----------GAAAAGTAGATTAAATTTTAATAATTGAACTG------TGATTTGAAAA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47652472 267 + 47698779 -TTCCAGGCCTTTTTGTAAATAGACCTTTAGACAGCGAA---CGCAACTCCACTTTTAAATGGTCACCTAAA-tgtaaggtgactg-----tcggagactagggatgtagactgtagcctcagaactaagtggct--tattgaagattaaagttgacttcattagcactttgtcccatc---ggctaagttaactggctgtggacCATAACCTAACAAGGGCTCTGAAACAACTT-------------GATGAGGTGAAAATCTAGTAATTAGACCATCCTGGTGATTTGGAAAG i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 320003 247 - 397369 TTGTTAGGTCTTTCCCCAAATAGACCCTTAAACAGTCAAACTCATTATTCCACTTAAAACCATCGACCCCAAATTTAAGATCCCAAATTCCAGCTAGGCTGGAAG-------TGTA---TCTGGACTAAGTGGCT--TATCCAAGATTAAACTTGATCTCATTAGCACCTTACTGTATTTA--------------GGTTGCAAACTAT-----AACAAGGGCTCTGAAAG---------------GAAAAGAGGGTGAAGTATTAATAATTGGGCCATC--AGTGATTTGAAAAG i dasNov3.JH569290 C 0 C 0 a score=1244413.000000 s hg38.chr20_KI270870v1_alt 167026 90 + 183433 CCTAATATTCAGCTCTAAAATCTTGAGTGTGAAGA-TTGAGTGTTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAG-CTATACCCTTCAC s panTro5.chr20 66502450 90 + 66533130 CCTAATATTCAGCTCTGAAATCTTGAGTGTGAAGA-TTGAGTGTTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAG-CTATACCCTTCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169670 90 + 62195757 CCTAATATTCAGCTCTGAAATCTTGAGTGTGAAGA-TTGAGTGTTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAG-CTATACCCTTCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556091 91 - 578057 CCTAATATTCAGCTCTAAAATCTTGAGTGTGAAGA-TCGAGTGTTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAGTTTATACCCTTCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077579 90 - 110113093 CCTAATATTCAGCTCTAAAATCTTGAGTGTGAAGA-TTGAGTATTGC---------ACCCTAAAAATAGAAGAGAATTTGTGTTAAG-CTATACCCTTCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817414 90 - 92844088 CGTAATATTCAGCTCTAAAATCTTGAGTATGAAGT-TTGAGTATTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAG-CCATAGCCTTCAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483084 90 + 96509753 CGTAATATTCAGCTCTAAAATCTTGAGTATGAAGT-TTGAGTATTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAG-CCATAGCCTTCAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953027 90 - 16982598 CCTAATATTCAGCTCTAAAATCTTGAGTATGAAGT-TTGAGTATTCC---------ACCATAAAAATAGAAGAGAGTTTGTGTTAAG-CCATAGCCTTCAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755015 90 - 3785965 CCTAATATTCAGCTCTAAAATCTTGAGTATGAAGT-TTGAGTATTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAG-CCATAGCCTTCAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344826 90 - 90373283 CCTAATATTCAGCTCTAAAATCTTGAGTATGAAGT-TTGAGTATTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAG-CCATAGCCTTCAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145735 90 - 179258 CCTAATATTCAGCTCTAAAATCTTGAGTATGAAGT-TTGAGTATTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAG-CCATAGCCTTCAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615145 90 - 5823884 CCTAATATTCAGCTCTAAAATCTTGAGCATGAAGT-CTGAGTATTCC---------ACCATAAAAATAGAAGAGAATTTGTGTTAAG-CCATAGCCTTCAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100170 90 + 372756 CCTAACATTTAGCTCTAAAATCTTGATTATGAAGA-TTGAGTAGTCT---------ACCATAAAAACAGAAGATAATTTGTGTTGAG-CCACACCCTTCAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334007 90 + 16356641 CCTAACATTTAGCTCTAAAATCTTGATTATGAAGA-CTGAGTATTCC---------ACCATAAAAACAGAAGATAATTTGTGTTAAG-CCATACCTTTCAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208544 90 + 1231380 CCTAACATTTAGCTCTAAAATCTTGATTATGAAGA-CTGAGTATTCC---------ACCATAAAAACAGAAGATAATTTGTGTTAAG-CCATACCCTTCAC i cebCap1.NW_016107870v1 I 258 C 0 s aotNan1.NW_018500483v1 2735931 88 + 11732439 CCTAACGTTTAGCTCTAAAATCTTGATTATGAAGA-TTGAGTATTCC---------ACCATAAAAAC--AAGATAATTTGTGTTAAG-CCATACCCTTCAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56921080 82 + 57149010 TTTAATATTCAGCTCTAAAATCTTGATTGTGAATATTTGACTAT------------------AAAATAGAAGAGAATTTGGGTTAAG-CCATACCCTTCAC i micMur3.chr18 C 0 I 260 s proCoq1.NW_012150197v1 1911427 82 - 2029793 TTTAATATTCAGCTCTAAAATCTCGATTGTGAATATTTGACTGT------------------AAAATAGAAGAGAATTTGTGTTAAG-CCATACCCTTCAC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22902031 81 + 22939663 TTTAATATTCAGTTCTAAAATCTTGACTGTGAATA-TTGACTAT------------------AAAATGGAAGAGAATTTGGGTTAAG-CCATATCCTTTAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181840892 69 + 182113224 TCTAATATTT---------TTCTTGACTATGAAGA-TGGATTATTTC---------ATCAT-AAAATGGAAAAGAATTTATATCAAG-AA----------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47652739 86 + 47698779 CATATTACTCATCTCTAAAATCTTGA---TGAGAA-TGAACTGTTCA---------ACCAT-GAAGCAGAAGAGCATTTATACTAAG-CCCCACGTTTCAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 320250 95 - 397369 --TAGTATTCAGGCCTAACCTTTTGA-TATGAGAA-TTGACTATACCAGTGTCCCAACCAT-GATATAGAAGAGACTTCATATTAAG-CCACACCCTTCAA i dasNov3.JH569290 C 0 C 0 a score=2800.000000 s hg38.chr20_KI270870v1_alt 167116 1 + 183433 A s panTro5.chr20 66502540 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169760 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556182 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077669 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817504 1 - 92844088 C i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483174 1 + 96509753 C i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953117 1 - 16982598 C i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755105 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344916 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145825 1 - 179258 C i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615235 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100260 1 + 372756 A i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334097 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208634 1 + 1231380 A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736019 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1911509 1 - 2029793 A i proCoq1.NW_012150197v1 C 0 I 130 s otoGar3.GL873542 22902112 1 + 22939663 A i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181840961 1 + 182113224 A i mm10.chr2 C 0 C 0 s canFam3.chr24 47652825 1 + 47698779 A i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 320345 1 - 397369 A i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56921162 260 + 57149010 I a score=1279395.000000 s hg38.chr20_KI270870v1_alt 167117 124 + 183433 CTTTTTGTTCACTTGT--AAGAAAC------------T------------A-----TGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTC--CCACCGCTGTCTCCAGT-----------------------TGTGTACGTGGG---TGTGTAT---GAAATCCGCCC-CAGGCCCCTTGTCACCCCACAG s panTro5.chr20 66502541 124 + 66533130 CTTTTTGTTCACTTGT--AAGAAAC------------T------------A-----TGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTC--CCACCGCTGTCTCCAGT-----------------------TGTGTACGTGGG---TGTGTAT---GAAATCCGCCC-CAGGCCCCTCGCCACCCCACAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169761 124 + 62195757 CTTTTTGTTCACTTGT--AAGAAAC------------T------------A-----TGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTC--CCACCGCTGTCTCCAGT-----------------------TGTGTACGTGGG---TGTGTAT---GAAATCCGCCC-CAGGCCCCTCGCCACCCCACAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556183 122 - 578057 CTTTTTGTTCACTTGT--AAGAAAC-------------------------------TGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTC--CCACCGCTGTCTCCAGT-----------------------TGTGTACGTGGG---TGTGTAT---GAAATCCGCCC-CAGGCCCCTCGCCACCCCACAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077670 124 - 110113093 CTTTTTGTTCACTTGT--AAGAAAC------------T------------A-----TGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTC--CCACCACTGTCTCCAGT-----------------------TGTGTACGTGGG---TGTGTAT---GAAATTCGCCC-CCGGCCCCTTGCCACCCCACAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817505 126 - 92844088 CTTTTTGTTCACTTGT--AAGGAAC------------T------------A-----CGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTCTCCCACCACGGTCGCCTGT-----------------------TGTGTACGTGGG---TGTGTGT---GAAATCTGCCC-CCGGCCCCTCGCCACCCTGCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483175 126 + 96509753 CTTTTTGTTCACTTGT--AAGGAAC------------T------------A-----CGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTCTCCCACCACGGTCGCCTGT-----------------------TGTGTACGTGGG---TGTGCAT---GAAATCTGCCC-CCGGCCCCTCGCCACCCTGCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953118 126 - 16982598 CTTTTTGTTCACTTGT--AAGGAAC------------T------------A-----CGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTCTGCCGCCGCTGTCGCCTGT-----------------------TGTGTACGTGGG---TGTGTAT---GAAATCTGCCC-CCGGCCCCTCGCCACCCTGCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755106 126 - 3785965 CTTTTTGTTCACTTGT--AAGGAAC------------T------------A-----CGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTCTCCCACCACTGTCGCCTGT-----------------------TGTGTACGTGGG---TGTGTAT---GAAATCTGCCC-CCGGCCCCTCGCCACCCTGCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90344917 126 - 90373283 CTTTTTGTTCACTTGT--AAGGAAC------------T------------A-----CGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTCTCCCACCACTGTCGCCTGT-----------------------TGTGTACGTGGG---TGTGTAT---GAAATCTGCCC-CTGGCCCCTCGCCACCCTGCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145826 126 - 179258 CTTTTTGTTCACTTGT--AAGGAAC------------T------------A-----CGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTCTCCCACCACTGTCGCCTGT-----------------------TGTGTACGTGGG---TGTGTAT---GAAATCTGCCC-CTGGCCCCTCGCCACCCTGCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615236 126 - 5823884 CTTTCTGTTCACTTGT--AAGGAAC------------T------------A-----CGTGAT-T-----AT----TTTCATTCCTGGGA--AAACCTCTCCAACCACTGTCACCTGT-----------------------TGTGTATGTGGG---TGTGTAT---GAAATCTGCCC-CCGGCCCCTCGCCACCCTGCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100261 126 + 372756 CTTTTTGTTCACTTGC--AAGAAAC------------T------------A-----TGTGAT-T-----AT----TTTCACTCCTGGAA--AAACCTCTCCCACCACTGTCACCAGT-----------------------TGTGTTCATGGG---TGTGTAT---GAAGTCTGCCCACTGCCCCCTCGGTA-CCCCCAG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334098 127 + 16356641 CTTTTTGTTCACCTAC--AAGAAAC------------T------------A-----TGTGAT-T-----AT----TTTCACTCCTGGGA--AAACCTCTCCCACCACTGTCAGCAGT-----------------------TGTGTACATGGG---TGTGTAT---GAAATCTGCCCACTGCCCCCTTGGGATCCCCCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208635 127 + 1231380 CTTTTTGTTCACTTGC--AAGAAAC------------T------------A-----TGTGAT-T-----AT----TTTCACTCCTGGGA--AAACCTCTCCCACCACTGTCACCAGT-----------------------TGTGTACATGGG---TGTGTAT---GAAATCTGCCCGCTGCCCCCTCAGCACCCGCCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736020 127 + 11732439 CTTTTTGTTCACTTGC--AAGAAAC------------T------------A-----TGTGAT-T-----AT----TTTCACTCCTGGGA--AAACCTCTCCCACCGCTGTCACCAGT-----------------------TGTGTACATGGG---TGTGTAT---GAAATCTGCCCACTGCCCCCTCGGCACCCCCCGG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22902113 121 + 22939663 -----TGTCCACCTGTTAAAAGAAC------------TGATGATTCATCCA-----TGTGAT-TGTTTAAT----TTTCATTCCTGGGA--AAGCCTCTCCCAT-----TTGCCATT-----------------------AGTGCGCATGGG-TATGTGTGT---GTAGTCTTTCC-----------------CCTCAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181840962 130 + 182113224 -GTTTTTTTTTTTTTT--AAGATGC------------T------------AGAG-TGGTAGT-TG----AT----TTTCATTTCTAGGCTTAATTCTCTAGCACTGCTGTTACCAGT-----------------------TGTGCACATGGG---TGTGTCTAGGGATGGGTGTGT-CTAGGCCCTG-----TCTCCAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47652826 113 + 47698779 -TATTTGT-----TAT--GAGAAGC------------T------------GAAGATTATCATGT-----GT----TTTTATTCCTGGGA--AAACCTCTCCCATCACAGTTGCCAGT-----------------------AGTGTGTGTGGGGTATGTATAT---GGAATCTATTC-----------------CCCCAG i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 320346 143 - 397369 CATTTTGTTTTCCTGT--TGTAAAAGCAGAAGATTCAT------------C-----TGTGGT-A-----ATTCAGTCACAATCATGAGA--CAATCTCTCCCACCGTAATTGCCtgtatatgtgtgtgtgtgtgtgtgtgtgtgtgtatgta---tgtatat---gAAATCCTCCC----------------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1911510 130 - 2029793 I e micMur3.chr18 56921162 260 + 57149010 I a score=901206.000000 s hg38.chr20_KI270870v1_alt 167241 68 + 183433 TATTTCTTTACGATCC----TCATTCTACTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA s panTro5.chr20 66502665 68 + 66533130 TATTTCTTTACGATCC----TCATTCTACTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169885 68 + 62195757 TATTTCTTTACGATCC----TCATTCTACTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556305 68 - 578057 TATTTCTTTACGATCC----TCATTCTACTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077794 68 - 110113093 TATTTCTTTACGATCC----TCATTCTGCTGTTAGAAATCCAGAGGAATGT-GAAGAGGAAAGCAAGTATAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817631 68 - 92844088 TATTTCTTAACCATCC----TCGTTCTGCTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483301 68 + 96509753 TATTTCTTAACCATCC----TCGTTCTGCTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953244 68 - 16982598 CATTTCTTAACCAGCC----TCATTCTGCTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755232 68 - 3785965 TATTTCTTAACCATCC----TCATTCTGCTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345043 68 - 90373283 TATTTCTTTACGATCC----TCATTCTGCTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 145952 68 - 179258 TATTTCTTAACCATCC----TCATTCTGCTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615362 68 - 5823884 TATTTCTTTACGATCC----TCATTCTGCTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGTATAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100387 72 + 372756 GATTTCTTTATTATCCTTTATTATCCTGCTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGAATGAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334225 68 + 16356641 TATTTCTTTATTATCC----TCAGCTTGCTGTTAGAAATCCAGAGGAATGT-GAGGAGGAAAGCAAGAATGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208762 68 + 1231380 TATTTCTTTATTATCC----TCATCCCACTGTTAGAAATCCAGAAGAATGT-GAGGAGGAAAGCAAGAATGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736147 68 + 11732439 TATTTCTTTATTATCC----TCATCCCGCTGTTAGAAATCCCGAGGAATGT-GAGGAGGAAAGCAAGAATGAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1911640 69 - 2029793 TATTTCTTCGTGATTC----TCATTCTGCTGTTAGAAATCTAGAGGATTGTGGAGGAGGAAAACAAGTATAAA i proCoq1.NW_012150197v1 I 130 I 65 s otoGar3.GL873542 22902234 69 + 22939663 TCTGTCTTTGTGATCC----TCATTTTGCTGTTAGAAATCTGGAGAATTGTGGAGGAGGAAAACAAGTATAAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181841092 41 + 182113224 ---------------------TATTCC------AGAGA----GAAGACTGG-GAACAGGGACCATAGCATAAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47652941 62 + 47698779 ------TTTATGATTC----TTGTTCTGCTGTTTGAAATCCAGAGGATTGT-GAGGGGGAACACAACGATAGA i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 320489 54 - 397369 -------------TCC----TCATTCCACTGTTGGAAACCTAGAAGATTGT-TTGG-GGAAAGCAAGTATAAA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56921162 260 + 57149010 I a score=253714.000000 s hg38.chr20_KI270870v1_alt 167309 35 + 183433 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAAGTTGTTAAA---------------------------AAGGTT s panTro5.chr20 66502733 35 + 66533130 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAAGTTGTTAAA---------------------------AAGGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169953 35 + 62195757 CTTCATCGT----AATTAT--------------------------------------------------------------------------------------AACAAGTTGTTAAA---------------------------AAGGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556373 35 - 578057 CTTCATCGT----AATTAT--------------------------------------------------------------------------------------AACAGGTTGTTAAA---------------------------ACGGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077862 35 - 110113093 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAGGTTGTTAAA---------------------------AAGGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817699 35 - 92844088 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAGGTTGTTAAA---------------------------AAGATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483369 35 + 96509753 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAGGTTGTTAAA---------------------------AAGATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953312 35 - 16982598 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAGGTTGTTAAA---------------------------AAGATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755300 35 - 3785965 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAGGTTGTTAAA---------------------------AAGATT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345111 32 - 90373283 CT---TCAT----AATTAT--------------------------------------------------------------------------------------AACAGGTTGTTAAA---------------------------AAGATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146020 35 - 179258 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAGGTTGTTAAA---------------------------AAGATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615430 35 - 5823884 CTTCCTCAT----AATTAT--------------------------------------------------------------------------------------AACAGGTTGTTAAA---------------------------AAGATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100459 35 + 372756 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AAAAGGTTTTTAAA---------------------------AAGGCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334293 35 + 16356641 GTCCATCAT----AATCAT--------------------------------------------------------------------------------------AACAGGTTTTTAAA---------------------------AAGGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208830 35 + 1231380 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAGGTTTTTAAA---------------------------AAGGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736215 35 + 11732439 CTTCATCAT----AATTAT--------------------------------------------------------------------------------------AACAGACTTTTAAA---------------------------AAGGTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22902303 120 + 22939663 -CTTTTTAt----atttatttatttatttatttattttttgagacagtctctcactatgttgcccttggtaaagtgcactggtgtcacagctcacagcaacctcaaactcttggtttaa---------------------------atgact i otoGar3.GL873542 C 0 I 186 s mm10.chr2 181841133 63 + 182113224 ---TGttgt----tattgtttga----------------------------------------------------------------------------------gacaggttcttatataatccacgctggcctggaactcacggaagatc i mm10.chr2 C 0 I 22 s canFam3.chr24 47653003 39 + 47698779 CTTTGTAATAATAAATTAT--------------------------------------------------------------------------------------AGTACGTTATTATG---------------------------GAAGTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 320543 8 - 397369 ----------------------------------------------------------------------------------------------------------------TTTTGTA---------------------------A----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1911709 65 - 2029793 I e micMur3.chr18 56921162 260 + 57149010 I a score=149974.000000 s hg38.chr20_KI270870v1_alt 167344 18 + 183433 GTGTTCAT----TTCAGAAAAT s panTro5.chr20 66502768 18 + 66533130 GTGTTCAT----TTCAGAAAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62169988 18 + 62195757 GTGTTCAT----TTCAGAAAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556408 18 - 578057 GTGTTCAT----TTCAGAAAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077897 18 - 110113093 GTGTTCAT----TTCAGAAAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817734 18 - 92844088 GTGTTCAT----TTCAGAAAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483404 18 + 96509753 GTGTTCAT----TTCAGAAAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953347 18 - 16982598 GTGTTCAT----TTCAGAAAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755335 18 - 3785965 GTGTTCAT----TTCAGAAAAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345143 18 - 90373283 GTGTTCAT----TTCAGAAAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146055 18 - 179258 GTGTTCAT----TTCAGAAAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615465 18 - 5823884 GTGTTCAT----TTCAGAAAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100494 14 + 372756 GTGTTCAT--------GAAAAT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334328 14 + 16356641 GTGTTCAT--------GAAAAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208865 14 + 1231380 GTGTTCAT--------GGAAAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736250 14 + 11732439 GTGTTCAT--------GAAAAT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22902609 18 + 22939663 GTGATAAT----TTTATAGTAG i otoGar3.GL873542 I 186 C 0 s mm10.chr2 181841218 19 + 182113224 ctgttgaga---ttcagAAAGT i mm10.chr2 I 22 I 6 s canFam3.chr24 47653042 14 + 47698779 --------CTGAATCCGAAAAT i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 320551 9 - 397369 -------------TCATAAAGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1911709 65 - 2029793 I e micMur3.chr18 56921162 260 + 57149010 I a score=435169.000000 s hg38.chr20_KI270870v1_alt 167362 27 + 183433 GTCTTCATGAGG-----TCTGGTGGTCTTTTT s panTro5.chr20 66502786 27 + 66533130 GTCTTCATGAGG-----TCTGGTGGTCTTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170006 27 + 62195757 GTCTTCATGAGG-----TCTGGTGGTCTTTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556426 27 - 578057 GTCTTCATGAGG-----TCTGGTGGTCTTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077915 27 - 110113093 GTCTTCATGAGG-----TCTGGTGGTCTTTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817752 27 - 92844088 GTCTTCATGAGG-----TCTGGTGGTCTTTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483422 27 + 96509753 GTCTTCATGAGG-----TCTGGTGGTCTTTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953365 27 - 16982598 GTCTTCATGAGG-----TCTGGTGGTCTTTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755353 27 - 3785965 GTCTTCATGAGG-----TCTGGTGATCTTTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345161 27 - 90373283 GTCTTCATGAGG-----TCTGGTGGTCTTTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146073 27 - 179258 GTCTTCATGAGG-----TCTGGTGGTCTTTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615483 27 - 5823884 GTCTTCATGAGG-----TCTGGTGGTCTTTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100508 27 + 372756 GTCTTCATGAGG-----TCTGGTGGTCTTTTC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334342 27 + 16356641 GTCTTCATGAGA-----TCTGGTGGTCTTTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208879 27 + 1231380 GTCTTCATGAGG-----TCTGGTGGTCTTCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736264 27 + 11732439 GTCTTCATGAGG-----TCTGGTGGTCTTTTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56921422 27 + 57149010 GTCTTCTTGAGG-----TCTGGTGGTCTTTTT i micMur3.chr18 I 260 C 0 s proCoq1.NW_012150197v1 1911774 27 - 2029793 GTCTTCGTGAGG-----TCTGGTGGTCTTTTT i proCoq1.NW_012150197v1 I 65 I 88 s otoGar3.GL873542 22902627 32 + 22939663 GTTGTTAAGAAGGTTGTTCTGGTCGTCTTTTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181841243 26 + 182113224 ATCTTT-TGTGG-----TTTGGTAGTCTTTCC i mm10.chr2 I 6 C 0 s canFam3.chr24 47653062 27 + 47698779 GTCTTTGTGAAG-----CCTGGTGTTTCCTGG i canFam3.chr24 I 6 I 3 s dasNov3.JH569290 320560 26 - 397369 AATTGCATGTG------TATGGTGGTTTTTCC i dasNov3.JH569290 C 0 C 0 a score=33016.000000 s hg38.chr20_KI270870v1_alt 167389 3 + 183433 --CCC s panTro5.chr20 66502813 3 + 66533130 --CCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170033 3 + 62195757 --CCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556453 3 - 578057 --CCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077942 3 - 110113093 --CCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817779 3 - 92844088 --CCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483449 3 + 96509753 --CCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953392 3 - 16982598 --CCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755380 3 - 3785965 --TCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345188 3 - 90373283 --CCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146100 3 - 179258 --CCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615510 3 - 5823884 --CGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100535 3 + 372756 --CCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334369 3 + 16356641 --CCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208906 3 + 1231380 --CCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736291 3 + 11732439 --CCC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56921449 3 + 57149010 --CCC i micMur3.chr18 C 0 I 104 s otoGar3.GL873542 22902659 3 + 22939663 --TCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181841269 3 + 182113224 --TTC i mm10.chr2 C 0 C 0 s canFam3.chr24 47653092 3 + 47698779 --TCC i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 320586 3 - 397369 AAC-- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1911801 88 - 2029793 I a score=988766.000000 s hg38.chr20_KI270870v1_alt 167392 76 + 183433 TGACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATATGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC s panTro5.chr20 66502816 76 + 66533130 TGACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170036 76 + 62195757 TGACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556456 76 - 578057 TGACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110077945 76 - 110113093 TGACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817782 76 - 92844088 CAACACTTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483452 76 + 96509753 CAACACTTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953395 76 - 16982598 CAACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755383 76 - 3785965 CAACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAGAAAGTTAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345191 76 - 90373283 CAACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146103 76 - 179258 CAACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615513 76 - 5823884 CAACAATTTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAGCAGTTACTTTGAAAAAGTTAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100538 70 + 372756 CAACAATCTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAG------CTTTGAAAAAGTTAC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334372 69 + 16356641 CAACAATCTGTATCTGGTG-TTTGTAAAGCATTACCATTTTATGTGAAGTTAAAG------CTTTGAAAAAGTTAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208909 70 + 1231380 CAACAATCTGTATCTGGCGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAG------CTTTGAAAAAGTTAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736294 70 + 11732439 CGACAATCTGTATCTGGTGTTTTGTAAAGCATTACCATTTTATGTGAAGTTAAAG------CTTTGAAAAAGTTAC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22902662 75 + 22939663 CAACAATTTATATGGGATATTTTATAAAGCATTACCATCTTAGGTGAAG-TGAAGCCATTATTTTGAAAAAATTAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181841272 61 + 182113224 -AACCGTTTATATC-------------AGCATCACCAGCTTTTAAGAAA-TAAAGCCATTAGTTTGGAAAAGTCAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47653095 76 + 47698779 CAGCAATTTATATCAAGTGTTTTGTAAAACATTACCATTTTGTGTGAAGTAAAATCATTCTTTTGGAAAGAGTTAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 320589 70 - 397369 -----TGTTTAATCAGATATGTTGTAAAACATTACCATTTTATGTCAAG-TAAAGCTGTTACTTTGGGAAAGTTAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1911801 88 - 2029793 I e micMur3.chr18 56921452 104 + 57149010 I a score=322496.000000 s hg38.chr20_KI270870v1_alt 167468 20 + 183433 ATGGGGTAAGTATAAAATTG s panTro5.chr20 66502892 20 + 66533130 ATGGGGTAAGTATAAAATTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170112 20 + 62195757 ATGGGGTAAGTATAAAATTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556532 20 - 578057 ACGGGGTAAGTATAAAATTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078021 20 - 110113093 ATGCGGTAAGTATAAAATCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817858 20 - 92844088 ATGGGGTAAGTATAAAATTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483528 20 + 96509753 ATGGGGTAAGTATAAAATTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953471 20 - 16982598 ATGGGGTAAGTATAAAATTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755459 20 - 3785965 ATGGGGTAAGTATAAAATTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345267 20 - 90373283 ATGGGGTAAGTATAAAATTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146179 20 - 179258 ATGGGGTAAGTATAAAATTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615589 20 - 5823884 GTGGGGTAAGTATAAAATTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100608 20 + 372756 ATGGGGTAAGTATAAAATTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334441 20 + 16356641 ATGGGGTAAGTATAAAATTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208979 20 + 1231380 ATGGGGTAAGTATAAAATTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736364 20 + 11732439 ATGGGGTAAGTATAAAATTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1911889 20 - 2029793 ATGGGATAATTATAAAATCA i proCoq1.NW_012150197v1 I 88 C 0 s otoGar3.GL873542 22902737 20 + 22939663 ATGGAGTAAGTATAAAATCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181841333 20 + 182113224 CCGAGGTCAGTATAAAACTG i mm10.chr2 C 0 C 0 s canFam3.chr24 47653171 20 + 47698779 ATGGGGTATGTATAAAATTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 320659 19 - 397369 ATG-GTTAAGCATAATATTG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56921452 104 + 57149010 I a score=3539267.000000 s hg38.chr20_KI270870v1_alt 167488 262 + 183433 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGACTTCTCCGCGTGAAAAAGTGTTTTCT-TGTGAATTAGCTGAAGCTACCCTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACATGC----TGTGCTTTTTCTTCTTGAAGGCAGGTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGCTGGGA-----AAGCTGCGTA----TCATGCAATTGAGGAGGGGC----TGTAGGAAGTTCTGGTAGCAGC------CCCTCCTACACTTAAACTTT s panTro5.chr20 66502912 262 + 66533130 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGGCTTCTCCGCATGAAAAAGTGTTTTCT-TGTGAATTAGATGAAGCTACCCTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACGTGC----TGCGCTTTTTCTTCTTGAAGGCAGGTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGCTGGGA-----AAGCTGCGTA----TCATGCAATTGAGAAGGGGC----TGTAGGAAGTTCTGGTAGCAGC------CCCTCCTACACTTAAACTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170132 262 + 62195757 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGGCTTCTCCGCATGAAAAAGTGTTTTCT-TGTGAATTAGATGAAGCTACCCTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACGTGC----TGCGCTTTTTCTTCTTGAAGGCGGGTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGCTGGGA-----AAGCTGCGTA----TCATGCAATTGAGAAGGGGC----TGTAGGAAGTTCTGGTAGCAGC------CCCTCCTACACTTAAACTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556552 259 - 578057 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGACTTCTCTGCATGAAAAAGTGTTTTCT-TGTGAATTAGATGAAGCTACCCTG--TATTTTAGTAGTTAGGCTCAGAGGTGA-CACGTGC----TGCGCTTTTTCTTCTTGAAGGCAGGTTGGG--AGAAGGTAAGACAAGTA---GTTATTTTTAAAGAGCTGGGA-----AAGCCGCGTA----TCATGCAATTGAGAAGGGGC----TGTAGGAGGTTCTGGTAGCAGC------CCCTCCTACGCTTAAACTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078041 266 - 110113093 GAAAGGATATTTTTGTAGGTTTAAGAAGGGTAAGACTTCTCCACATGAAAAAGTGTTTTCT-TGTGAATTAGATGAAGCTATGCTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACATGCTGCGTGCGCTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGATCTGGGA-----AAGCTGCGTA----TCATGCAATTGAGAAGAGGC----TGTAGGAAGTTCTGGTAGCAGC------CCCTCCTACACTTAAACTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92817878 262 - 92844088 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGACTTCTCCATATGGAAGAGTGTTTTCC-TGTGAATTAGATGAAGCTACACTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACATTC----TGCGCTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGTTGGGA-----AAGCTGCATA----TCATGCAATTCAGAAGAGGC----TGTAGGAAGTTCTGGTAGCAGC------CCTTCCTACACTTAAACTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483548 262 + 96509753 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGACTTCTCCATATGGAAGAGTGTTTTCT-TGTGAATTAGATGAAGCTACACTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACATTC----TGCGCTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGTTGGGA-----AAGCTGCATA----TCATGCAATTAAGAAGAGGC----TGTAGGAAGTTCTGGTAGCAGC------CCTTCCTACACTTAAACTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953491 262 - 16982598 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGACTTCTCCATATGGAAGAGTGTTTTCT-TGTGAATTAGATGAAGCTACACTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACATTC----TGCGCTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGTTGGGA-----AAGCTGCATA----TCATGCAATTAAGAAGAGGC----TGTAGGAAGTTCTGGTAGCAGC------CCTTCCTACACTTAAACTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755479 262 - 3785965 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGACTTCTCCATATGGAAGAGTGTTTTCT-TGTGAATTAGATGAAGCTACACTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACATTC----TGCGCTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGTTGGAA-----AAGCTGCATA----TCATGCAATTAAGAAGAGGC----TGTAGGAAGTTCTGGTAGCAGC------CCCTCCTACACTTAAACTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345287 260 - 90373283 GAAAGGATA-TTTTGTAGTTCTAAGAAGAGTAAGACTTCTCCATATGGAAGAGTGTTTTCT-TGTGAATTAGATGAAGCTACACTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACATTC----TGCGCTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGTTGGGA-----AAGATGCATA----TCATGCAATTAAGAAGAGGC----TGTAGGAAGTTCTGTT-GCAGC------CCCTCCTACACTTAAACTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146199 262 - 179258 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGACTTCTCCATATGGAAGAGTGTTTTCT-TGTGAATTAGATGAAGCTACACTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACATTC----TGCGCTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGTTGGGA-----AAGCTGCATA----TCATGCAATTAAGAAGAGGC----TGTAGGAAGTTCTGGTAGCAGC------CCCTCCTACACTTAAACTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615609 259 - 5823884 GAAAGGATATTTTTGTAGTTTTAAGAAGAGTAAGACTTCTCCATATG--AAAGTGTTTTCT-TGTGAATTAGATGAAGCTACACTG--TATTTTAATAGTTAGGCTCAGAGGTGA-CACATTC----TGTGCTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTCTTTTTAAAGAGTTGGGA-----AAGCTGCATA----TCATGCAATTAAGAAGAGGC----TG-AGGAAGTTCTGGTAGCAGC------CCCTCCTACACTTAAACTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100628 274 + 372756 GAAAGGATATTTTTGTAGCTTTAAGGAGGGTAAGACTTCTCCACATGAAAGAATGTTTTCC-TGTGAATTAGATGAAGCTACACTGTATGTTTTAATAGTTAGGCTCAGAGGTGA-CACCTCC----TGCACTTTTTCTTTTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGCTGGGA-----AAGCTGCATA----TCATGCAATTGAGAAGGGGCTGTATGTAGGAAGTTCTGGTAGCGCCCCGCTCCCCCCCCCCACTTAAACCTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334461 237 + 16356641 GAAAGGATATTTTTGTAGCTTTTAGAAGAGTAAGACTTCTCCACATGAAAGAATGTTTTCC-TGTGAATTAAATGAAGCTACACTGTATATTCTAATACTTAGGCTCAGAGGTGA-CACCTGC----TGCACTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTTAGACAAGTAGCTGTTATTTTTAAAGAGTTGGGA-----AGACTGCATA----TCATGCAGTT-----------------------TTCCA--------------CACACACATACTTAAACCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1208999 266 + 1231380 GAAAGGATATTTTTGTAGCTTTAAGAAGAGTAAGACTTCTCCACGTGAAAGAATGTTTTCA-TGTGAATTAGGTGAAGCTACACTGTATATTTTAATAGTTAGGCTCAGAGGTGA-CACCTGC----TGCACTTTTTCTTCTTGAAGGCAGCTTGGG--AGAAGGTAAGACAAGTAGTTGTTATTTTTAAAGAGCTGGGA-----AAGCTGCATA----TCATGCAATTGAGAAGGGGC----TATAGGAAGTTCTGGTAGTGCCCC----CCCTCCTACACTTAAACCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736384 260 + 11732439 GAAAGGTTATTTTTGTAGCTTTAAGAAGAGTAAGACTTCTCCACGTGAAAGAATGTTTTCC-TGTGAATTAGATGAAGCTACACTGTGTATTTTAA----TAGGCTAAGAGGTGA-CCCCTGC----TGCACTTTTTCTTCTTGAAGGCAGCTTGGG--AGAGGGTAAGACAAGTAGTCGTTATTTTTAAAGAGCTGGGA-----ACGCTGCATA----TCATGCAACTGAGAAGGGGC----TGTAGGAAGTTCCGGTAGCGCC------CCCTCCTACACTTAAACGTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56921556 264 + 57149010 GAAAGGATATTTTTATAGTTTTAGGAAGAGTAAGACTTCTCCAGATGAAAGAGCGTTTTCC-TATGAATTAGATGAAGGTA-ATTA--TATATTAATAGTTGTGCTCAGAGG-GA-TACATGC----TGCACTTTTTCTTCTTGAAGGCAGTGTGGG--AGAAGGCAAGAAATGTACTTTTTATTTTTAAAGAGCTGGGA-----AGGCTACATACATAGCCTGCACTTCAGAAGGGGC----GGTAGGAGGGTCTGGTAGCAGC------CCCTCCTACTCTTAAGCTTT i micMur3.chr18 I 104 I 226 s proCoq1.NW_012150197v1 1911909 254 - 2029793 AAAAGGATATTTTTATAGTTTTAGGAAGAGTAAGACTTCTGCAGATGAAGGAGCATTTTCC-TGTGAATTAGATGAAGGTG-ATTG--TGTATTAATAGTTGGGCTCAGAGG-GA-CACGTGC----TGCACTTTTTCTTCTCAAAGGCAGAGTGGG--AGAAGGCAGGAAATGTACTTTTCATTTTTAAAGAGCTGGGA-----GTGCTACGCG----------GCTTCAGAAGGGGT----GGTAGGAAGATCTGGTAGCAGC------CCCTCCTACTCTTACGCTTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22902757 256 + 22939663 GAAAGGATATTTTTACAGTTTTAGGGAGAGTAAGACTTCTCCAGATGAAAGAGCATTTTCC-TATGAATTAGAGGAAGGTA-ATTG--TATGTTAATAGTTGGTCTCAGAGG-G--TACATGC----TGTCCATTTTCTTCTTGAAGGCAGTGTGGG--AGAAAGTAAGAAAAGTACTTTTTATTTTTAAAG-GCCGGGA-----AGGCTATGTA----GCCTACACTTCAGAAGGGGC----TG-AGGAAGGTCTGGTAGCAGC------CCTTCCTACTCTGAAGCTT- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181841353 235 + 182113224 GGGAGGATATTTTTCATTTTCTAGAAAGAAAAAGACCTTTCCGGGGTAAAAAAATATTCCC-TGTTCACTGGATCATGGAATATTG----TTTTAGTAGTTGTACCTAAAGGGGA-TGCTTTC----TTCAC----------------CAACATGGGATAGAAGATAAGAAATATA------CTTCTTAGATAGCAAGGAAAAGGAAGCTATATA----GTAAGTA----------GGC----CTCTGAGTGCCCCGGCAGTGAC------CCTGTCTACTGCTAAACTTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47653191 218 + 47698779 GAGAAGATATTTTTATGG-TTCATGAAGATGAGG-----------------------TCCC-TGTGAATTAGTTGGAGGCACATTG--TATGTTAGCATGT-GGCTCAGAGGGCATCACATTG----T-TGCTTTTTCTTCTTGAAAGCAGTTGGGA--AGAAGGTAAGCAATGTACCTTTTATTGTTAAAGAGGCAGAA-----AGATTGCATG----ACGTATACTTCCAAAGTGGG----CATAGGA--TTCTTGTAGCAGC------TAT----------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 320678 240 - 397369 GAAAGGACATTTTTATAGTTTTAGGAGGAATAAGACCT---------AGAGAGCATTTTCTATGTAAATTGTGTGACGGTACATTG--TATTTTAGTAGTTGGGTTTAGAGGAGAATAAGTGC----TGTAC---TTATTCTTGAAGGCAGTTGGGA--AAAAGGTAA---ATATA-TTTTCATTTTTAAAGAGCTGGGA-----AGGTTGCATT----GCGTATCATTCAAGAGGGGA----AATAGAAAG-TCTATTAGCCGT------T-------TGATTGAGCCTT i dasNov3.JH569290 C 0 C 0 a score=685675.000000 s hg38.chr20_KI270870v1_alt 167750 59 + 183433 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAAAAGGTATTTGTCACAGTACGTTCAATT s panTro5.chr20 66503174 59 + 66533130 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAAAAGGTATTTGTCACAGTACGTTCCATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170394 59 + 62195757 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAAAAGGTATTTGTCACAGTACGTTCCATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556811 59 - 578057 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAAAAGGTATTTGTCACAGCACGTTCAATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078307 59 - 110113093 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAGAAGGTATTTGTCACAATACGTTCAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818140 59 - 92844088 AGCCAGGAAGTTGATTTTGCATTTGTTAGGAGAAGGTGTTTGTCACAGTGTGTTCAATT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483810 59 + 96509753 AGCCAGGAAGTTGATTTTGCATTTGTTAGGAGAAGGTGTTTGTCACAGTGTGTTCAATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953753 59 - 16982598 AGCCAGGAAGTTAATTTTGCATTTGTTAGGAGAAGGTGTTTGTCACAGTGTGTTCAATT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755741 59 - 3785965 AGCCAGGAAGTTGATTTTGCATTTGTTAGGAGAAGGTGTTTGTCACAGTGTGTTCAATT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345547 53 - 90373283 AGCCAGGAAGCTGAT------TTTGTTAGGAGAAGGTATTTGTCACAGTGTGTTCAATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146461 59 - 179258 AGCCAGGACGTTGATTTTGCATTTGTTAGGAGAAGGTGTTTGTCACAGTGTGTTCAATT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615868 59 - 5823884 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAGAAGGTATTTGTCACAATGTGTTCAATT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100902 59 + 372756 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAGAAGGTATTTGTCATAGTATGTTATATT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334698 59 + 16356641 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAGAAGGTATTTGTCATAGAATGTTGTATT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209265 59 + 1231380 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAGAAGGTATTTGTCATAGTATGTTGTATT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736644 59 + 11732439 AGCCAGGAAGCTGATTTTGCATTTGTTAGAAGAAGGTATCTGTCATAGTATGTTGTATT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1912163 53 - 2029793 ------GAAACTGATTTTGTTTTGTTACAAACGAGGTGTTTGTCACAATATATTCCGTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22903013 35 + 22939663 ------GAAACAGATTTTGT------------------TTTATCACAATATGTTCTATT i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181841588 55 + 182113224 AGCCTTGAAACTGATTTTATGTTTGTTACAATAAAG----TGTCACAATGTGTTCTATT i mm10.chr2 C 0 C 0 s canFam3.chr24 47653409 56 + 47698779 AGCCTGGAAACAGATTTCGTATTTGTTACAAATAAAA---TGTCACCATTGGTCCTTTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 320918 33 - 397369 -------AATATAGTTTT-------------------ATTTGTAACAATGTGTTCTATT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56921820 226 + 57149010 I a score=26826.000000 s hg38.chr20_KI270870v1_alt 167809 3 + 183433 -TGG s panTro5.chr20 66503233 3 + 66533130 -TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170453 3 + 62195757 -TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556870 3 - 578057 -TGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078366 3 - 110113093 -TGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818199 3 - 92844088 -TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483869 3 + 96509753 -TGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953812 3 - 16982598 -TGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755800 3 - 3785965 -TGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345600 3 - 90373283 -TGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146520 3 - 179258 -TGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615927 3 - 5823884 -TGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100961 3 + 372756 -TGG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334757 3 + 16356641 -TGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209324 3 + 1231380 -TGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736703 3 + 11732439 -TGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1912216 3 - 2029793 -TGG i proCoq1.NW_012150197v1 C 0 C 0 s mm10.chr2 181841643 3 + 182113224 -TGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47653465 2 + 47698779 --GG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 320951 3 - 397369 TTC- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56921820 226 + 57149010 I e otoGar3.GL873542 22903048 3 + 22939663 I a score=1196041.000000 s hg38.chr20_KI270870v1_alt 167812 91 + 183433 GAAGAGTGTT-TTCT---TGC-----TGTTTTTGTCTAAAATTTGAACATCAA-AATATCCAAATCAACAGGTCAGATGGATTGCT--------TGACTTGGGTGGGTA s panTro5.chr20 66503236 91 + 66533130 GAAGAGTGTT-TTCT---TGC-----TGTTTTTGTCTAAAATTTGAACATCAG-AATATCCAAATCAGCAGGTCAAATGGATTGCT--------TGACTTGGGTGGGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170456 91 + 62195757 GAAGAGTGTT-TTCT---TGC-----TGTTTTTGTCTAAAATTTGAACATCAG-AATATCCAAATCAGCAGGTCAAATGGATTGCT--------TGACTTGGGTGGGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556873 99 - 578057 GAAGAGTGTT-TTCT---TGC-----TGTTTTTGTCTAAAATTTGGACATCAG-AATATCCAAATCAACAGGTCAAACGGATTGCTGGGCTTGGGGACTTGGGTGGGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078369 91 - 110113093 GAAGAGTGTT-TTCT---TGA-----TGTTTTTGTCTAAAATTTGAACATTAA-AATATCCAAATCAACAGGTCAAATGGATTGCT--------TGACTTGGGTGGGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818202 91 - 92844088 GAAGAGTGTT-TTCT---TGC-----TTTTTTTGTCTAAAATTTGAACATCAA-AATATCCAGATCAACAGGTCAAATGGATTGCT--------TGACTTGGGTGGGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483872 91 + 96509753 GAAGAGTGTT-TTCT---TGC-----TTTTTTTGTCTAAAATTTGAACATCAA-AATATCCAGATCAACAGGTCAAATGGATTGCT--------TGACTTGGGTGGGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953815 91 - 16982598 GAAGAGTGTT-TTCT---TGC-----TTTTTTTGTCTAAAATTTCAACATCAA-AATATCCAGATCAACAGGTCAAATGGATTGCT--------TGACTTGGGTGGGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755803 70 - 3785965 GAAGAGTGTT-TTCT---TGC-----TTTTTTTGTCTAAAATTTGAACATCAA-AATATCCAGATCA-----------------------------ACTTGGGTGGGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345603 90 - 90373283 GAAGAGTG-T-TTCT---TGC-----TTTTTTTGTCTAAAATTTGAACATCAA-AATATCCAGATCAACAGGTCAAATGGATTGCT--------TGACTTGGGTGGGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146523 91 - 179258 GAAGAGTGTT-TTCT---TGC-----TTTTTTTGTCTAAAATTTGAACATCAA-AATATCCAGATCAACAGGTCAAATGGATTGCT--------TGACTTGGGTGGGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5615930 91 - 5823884 GAAGAGTGTT-TTCT---TGC-----TTTTTTTGTCTAAAATTTGAACATCAA-AATATCCAGATCAACAGGTCAAATGGATTGCT--------TGACTTGGGTGGGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 100964 91 + 372756 GAAGAGTGTT-TTCT---TGA-----TGTTTTTATCTAAAATTTGAACATCAA-AATATCCAAATCAACAGGTCGAATGGATTGCT--------TGACTTGGGTGGGTA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334760 86 + 16356641 GAAGGGTGTT-TTCT---TGA-----TGTTTTTGTCTAAAATTTGAACATCAA-AATATC-----CAACAGGTCGAATGCATTGCT--------TGACTTGGGTGGGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209327 90 + 1231380 GAAGAGTGTT-TTCT---TGA-----TG-TTTTGTCTAAAATTTGAACATCAA-AATATCCAAATCAACAGGTCGAATGGATTGCT--------TGACTTGGGTGGGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736706 91 + 11732439 GAAGAGTGTT-TTCT---TGA-----TGTTTTTATCTAAAATTTGAACATCAA-AATATCCAAATCAACAGGTCGAATGGAGTGCT--------TGACTTGGGTGGGTA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1912219 91 - 2029793 GAAGAGAGTT-TTGG---TGA-----TGTTTTTGCCTAAAATTTGACTATCAA-AGTATCCAAACCCACAGATTGAATGGATTGCT--------TGACTTGGGTGGGTA i proCoq1.NW_012150197v1 C 0 I 91 s otoGar3.GL873542 22903051 97 + 22939663 GGAGAAAGTT-TTAG---TGATTTTTTTTTTTTGTCTGAAGTTTAACTGCCAAGAGTATCCAAATCAACATATTGAATGGATTGCT--------TGACTTGGGTGGGTA i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181841646 90 + 182113224 GAAGAAAGTT-TTGT---GAA-----TGTTTTTACCTAAAACGTAAACACCAG-AGAAACCTAATCAGTAGGTTGGATGTATTACT--------TCTTGTGGGTGGGT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47653468 79 + 47698779 TAAGAGTTTTGTTAG---TGG-----TGTTTTTGCCAGAAATTTG---------TATATCCAAGTGAACAGATTGGATGGATTCCT--------TGACCTGGTA----- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 320954 95 - 397369 AAAGAAAGTT-TTATTCATGT-----TGTTTGTGCCTAAAATTTGAATGTTAAAAATATCCAAATCAGCAGATTGAATGGATCACT--------TGATATAAGTAGATA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56921820 226 + 57149010 I a score=568828.000000 s hg38.chr20_KI270870v1_alt 167903 51 + 183433 CTTTTGTG-TATGTTGGGGA--TAtagaattcccagatgtaatataggac-acca s panTro5.chr20 66503327 51 + 66533130 CTTTTGTG-TATGTTGGGGA--TAtagaattcccggatgtaatataggac-acca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170547 51 + 62195757 CTTTTGTG-TATGTTGGGGA--TAtagaattcccggatgtaatataggac-acca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 556972 51 - 578057 CTTTTGTG-TATGTTGGGGA--TAtagaattcccagatgtaatataggac-acca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078460 51 - 110113093 CTTTTGTG-TCTGTTGGGGA--TAtagaattcccagatgtaatataggac-acca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818293 52 - 92844088 TTTTTGTGTTATGTTGGGGA--TGtagagttcccagatgtaatataggac-acca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96483963 52 + 96509753 TTTTTGTGTTATGTTGAGGA--TGTAGAGTTCCCAGATGTAATATAGGAC-ACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953906 52 - 16982598 TTTTTGTGTTATGTTGGGGA--TGtagagttcccagatgtaatataggac-acca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755873 52 - 3785965 TTTTTGTGTTATGTTGGGGA--TGtagagttcccagatgtaatataggac-acca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345693 52 - 90373283 TTTTTGTGTTCTGTTGGGGA--TGTAGAGTTCCCAGATGTAATATAGGAC-ACTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146614 52 - 179258 TTTTTGTGTTATGTTGGGGA--TGtagagttcccagatgtaatataggac-acca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616021 50 - 5823884 TTTTTGTGTTATGGTGGGGA--TGT--Agttcccagatgtaatataggac-acca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101055 51 + 372756 CTTTTGTG-TATGTTGGGGA--TGtagagttcccagatacaatataggac-acca i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334846 51 + 16356641 CTTTTGTG-TATGTTGGGGG--TGtagagttcccagatacaatataggac-acca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209417 51 + 1231380 CTTTTGTG-TATGTTAGGGA--TGtagagttcccagatgcaatataggac-acca i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736797 53 + 11732439 CTTTTGTG-TATGTTGGCGATGTGTAGAGTTCCCAGATATGATATAGGAC-ACCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22903148 51 + 22939663 TATGTGTA-TATGTTGAGGG--TGtagagtt-ccagataaaatataggatggcca i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181841736 29 + 182113224 -TTGTGTA-TATGTTGA-GA--TGTAGTGATCCA--------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47653547 50 + 47698779 TTTATGTG-TCTG-TGAGGG--CAtagagttgtcaggtaaaatttaggac-acca i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 321049 43 - 397369 ---------TTTGTGGGTGA--TAtagaattgtcagatataatataggat-atca i dasNov3.JH569290 C 0 I 4 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e micMur3.chr18 56921820 226 + 57149010 I a score=93415.000000 s hg38.chr20_KI270870v1_alt 167954 18 + 183433 -------------cctaaa---------gttttttttctt----- s panTro5.chr20 66503378 18 + 66533130 -------------cctaaa---------gttttttttctt----- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170598 16 + 62195757 -------------cctaaa---------gttttttt--tt----- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557023 18 - 578057 -------------cctaga---------gttttttttctt----- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078511 17 - 110113093 -------------cctaaa----------ttttttttctt----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818345 17 - 92844088 -------------cctaaa----------ttttttttctt----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484015 17 + 96509753 -------------CCTAAA----------ttttttttctt----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953958 17 - 16982598 -------------cctaaa----------ttttttttttt----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755925 17 - 3785965 -------------cctaaa----------ttttttttctt----- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345745 17 - 90373283 -------------CCTAAA----------TTTTTTTTCTT----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146666 17 - 179258 -------------cctaaa----------ttttttttctt----- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616071 17 - 5823884 -------------cctaaa----------ttttttttctt----- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101106 16 + 372756 --------------ctaaa----------ttttctttttc----- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334897 16 + 16356641 --------------ctaaa----------ttttctttttc----- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209468 16 + 1231380 --------------ctaaa----------ttttctttttc----- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736850 16 + 11732439 --------------CTAAA----------TTTTCTTTTTT----- i aotNan1.NW_018500483v1 C 0 I 2 s mm10.chr2 181841765 17 + 182113224 -------------GTTAAT----------GTTAATTCCAT----- i mm10.chr2 C 0 I 169 s canFam3.chr24 47653597 45 + 47698779 ggtaaatgtgaaaattaaatagcgaataattttATTGTTTGTTGT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e micMur3.chr18 56921820 226 + 57149010 I e dasNov3.JH569290 321092 4 - 397369 I e otoGar3.GL873542 22903199 0 + 22939663 C a score=146087.000000 s hg38.chr20_KI270870v1_alt 167972 27 + 183433 tt----------ctcttt--tttttt---------tttttttttttga s panTro5.chr20 66503396 22 + 66533130 tt----------ctc-------tttt---------tttttttttttga i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170614 22 + 62195757 tt----------ctt-------cttt---------tttttttttttga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557041 29 - 578057 tt----------ttcttttctttctt---------tttttttttttga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078528 25 - 110113093 tt----------ttcttt----tctt---------tttttttttttga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818362 25 - 92844088 tt----------ttcttt----tctc---------tttttttttttga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484032 25 + 96509753 tt----------ttcttt----tctc---------tttttttttttga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16953975 25 - 16982598 tt----------cttttc----tctt---------tttttttttttga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755942 27 - 3785965 tt----------ttcttt----tctc-------tttttttttttttga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345762 34 - 90373283 TT----------ttcttt----tctctcttttttttttttttttttga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146683 29 - 179258 tt----------ttcttt----tctc-----tttttttttttttttga i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616088 20 - 5823884 tt----------ttcttt----tctt--------------ttttttga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101122 27 + 372756 tttg--------tttttt----tttt---------tttttttttttga i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334913 23 + 16356641 ------------ttttct----tttc---------tttttttttttga i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209484 28 + 1231380 tttgt-------tttttt----tttt---------tttttttttttga i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736868 35 + 11732439 TTTGtttctttctttatt----attt---------tttttttttttga i aotNan1.NW_018500483v1 I 2 C 0 s canFam3.chr24 47653642 31 + 47698779 TT----------ATCTTT----ATTT---CATATTATTTTTCTTTTAA i canFam3.chr24 C 0 I 264 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e mm10.chr2 181841782 169 + 182113224 I e micMur3.chr18 56921820 226 + 57149010 I e dasNov3.JH569290 321092 4 - 397369 I e otoGar3.GL873542 22903199 0 + 22939663 C a score=1041024.000000 s hg38.chr20_KI270870v1_alt 167999 114 + 183433 gac----agagtcttgctctgttccgcaagctggagtgcagtggtacgagctctgatcactgcaacctctgcctcccgggttcaagtgattcttctccctcagcctcgccagtagctg s panTro5.chr20 66503418 114 + 66533130 gac----agagtcttgctctgttccgcaagctggagtgcagtggtacgagctctgatcactgcaacctctgcctcccgggttcaagcgattcttctccctcagcctcgccagtagctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170636 114 + 62195757 gac----agagtcttgctctgttccgcaagctggagtgcagtggtacgagctctgatcactgcaacctctgcctcccgggttcaagcgattcttctccctcagcctcgccagtagctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557070 114 - 578057 gac----agagtcttgctctgttccgcaagctggagtgcagtggtacgagctctgctcaccgcaacctctgctcccgggttccaagcgattcttctccctcagcctcgccagtagctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078553 115 - 110113093 gaca---agagtcttgctctgttccccaagctggagtgcagtggcacgagttctgctcactgcaacctctgcctcccaggttcaagcgattttcctccctcagcctcacgagtagctg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818387 118 - 92844088 gacagagagagtcttgctctattgcccaagctggagtgcagtggcatgagctgtgctcactgcagcctctgcctcccgggttcaagcttttctcctctctcagccttgcaagtagctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484057 118 + 96509753 gacagagagagtcttgctctattgcccaagctggagtgcagtggcatgagctgtgctcactgcagcctctgcctcccgggttcaagcttttctcctctctcagccttgcaagtagctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954000 116 - 16982598 gac--agagagtcttgctctattgcccaagctggagtgcagtggcatgagctgtgctcactgcagcctctgcctcccgggttcaagcttttctcctctctcagccttgcaagtagctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3755969 118 - 3785965 gacagagagagtcttgctctattgcccaagctggagtgcagtggcacgagctgtgctcactgcagcctctgcctcccgggttcaagcttttctcctctctcagccttgcaagtagctg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345796 118 - 90373283 gacagagagagtcttgctctgttgcccaagctggagtgccgtggcacaagctgtgctcactgcagcctctgcctcccgggttcaagcgattctcctctctcagccttgcgagtagctg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146712 118 - 179258 gacagagagagtcttgctctattgcccaagctggagtgcagtggcacgatctgtgctcactgcagcctctgcctcctgggttcaagcttttctcctctctcagccttgcaagtagctg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616108 118 - 5823884 gacagagagagtctttctctgttgcccaggctggagtgcagtggtacgagctgtgctcactgcagcctctgcctcccgggttcaagcgattcttctctctcagccttgcgagtagctg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101149 114 + 372756 gac----agagtcttgctctgttgcccaggctggagtgcagtggcacaatctctgctcgctgcaacctctgcctcccgggttcaagcaattctcctgcctctgcctcacaagtagctg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16334936 114 + 16356641 gac----agagtcttgctctgttgcccaggctagagtgcagtggcacaatctctgctcgctgtaacctctgcctcccgggttcaagcagttctcctgcctcagcctcacaagtagctg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209512 114 + 1231380 gac----agagtcttgctctgttgcccaggctagagtgcagtggcacaatctctgctcgctgcaacctccgcctcccgggttcaagcaattcttctgcctcagcctcacaagtagctg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2736903 110 + 11732439 gac----agagtcttgctctgttgcccaggctagagtgcagtggcacaatctctgctcgct----cctctgtctcccgggttcaagcaattctcctgcctcagcctcacaagtagctg i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e canFam3.chr24 47653673 264 + 47698779 I e mm10.chr2 181841782 169 + 182113224 I e micMur3.chr18 56921820 226 + 57149010 I e dasNov3.JH569290 321092 4 - 397369 I e otoGar3.GL873542 22903199 0 + 22939663 C a score=728536.000000 s hg38.chr20_KI270870v1_alt 168113 72 + 183433 ggattacaggcatccaccagcatgcctggctaatttttgt--------attttttagtagagacggggtttcaccatgtt s panTro5.chr20 66503532 71 + 66533130 ggattacaggcatccaccagcatgcctggctaatttttgt--------a-ttttcagtagagacagggtttcaccatgtt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170750 71 + 62195757 ggattacaggcatccaccagcatgcctggctaatttttgt--------a-ttttcagtagagacagggtttcaccatgtt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557184 71 - 578057 ggattacaggcatccaccagcacgcctggctaatttttgt--------a-ttttcagtagagacggggtttcaccatgtt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078668 71 - 110113093 ggattacaggcatccaccagcatgcctggctaatttttgt--------a-ttttcggtagagacggggtttcaccatgtt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818505 71 - 92844088 ggattacaggcatccactagcacgcctggctaatttttgt--------a-tttttagtagagacggggttttaccatgtt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484175 71 + 96509753 ggattacaggcatccactagcacgcctggctaatttttgt--------a-tttttagtagagacggggttttaccatgtt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954116 71 - 16982598 ggattacaggcatccactagcacgcctggctaatttttgt--------a-tttttagtagagacggggttttaccatgtt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756087 71 - 3785965 ggattacaggcatccactagcacgcctggctaatttttgt--------a-tttttagtagagacggggttttaccatgtt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345914 71 - 90373283 ggattacaggcatccaccagcacgcctggccaatttttgt--------a-tttttagtagagacggggttttaccatgtt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146830 71 - 179258 ggattacaggcatccactagcacgcctggctaatttttgt--------a-tttttagtagagacggggttttaccatgtt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616226 71 - 5823884 ggattacaggcatccaccagcacgcctggctaatttttgt--------a-tttttagtagagacggggttttaccatgtt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101263 71 + 372756 ggattacagggatccaccaccatgcctggctaatttttgt--------g-tttttagtagagatggggtttcaccatgtt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335050 71 + 16356641 ggattacaggcatgcgccaccacgcctggctaatttttgt--------g-tttttagtagagatggggtttcactctgtt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209626 71 + 1231380 ggattacaggcatgcgtcaccacgcctggctaatttttgt--------g-tttttagtagagatggggtttcaccatgtt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737013 71 + 11732439 ggattacagggatccaccaccgtgcctggctaatttttgt--------a-tttttagtagagacgggatttcctcatgtt i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181841951 78 + 182113224 GAATTTCACTTAAACACCA-TATAGTTTGTTATTTATTATTAGCTTAAA-TCTTTAGTGGAGCTAGTGTTTTGTTTTGTT i mm10.chr2 I 169 I 145 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e canFam3.chr24 47653673 264 + 47698779 I e micMur3.chr18 56921820 226 + 57149010 I e dasNov3.JH569290 321092 4 - 397369 I e otoGar3.GL873542 22903199 0 + 22939663 C a score=890109.000000 s hg38.chr20_KI270870v1_alt 168185 93 + 183433 ggccaggctgttcttgaactcctgacctcaggtgatccaactgcctcggcctcccaaagtgctgggattacagtcatgacccaccgcacccgg s panTro5.chr20 66503603 93 + 66533130 ggccaggctgttcttgaactcctgacctcaggtgatccaactgcctcggcctcccaaagtgctgggattacagtcatgaccccccgcacccgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170821 92 + 62195757 ggccaggctgttcttgaactcctgacctcaggtgat-caactgcctcggcctcccaaagtgctgggattacagtcctgaccccccgcacccgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557255 93 - 578057 ggccaggctgttcttgaactcctgacctcaggtgatccacctgcctcagcctcccaaagtgctgggattacagtcatgagccaccgcacccgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078739 93 - 110113093 ggccgggctgttctggaactcctgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacagtcatgagccaccgcacccgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818576 93 - 92844088 ggccacgctgttctcgaactcctgacctcaggtgatccgctcacctcagcctcccaaagtgctgggattacagtcatgagccaccgcacccgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484246 93 + 96509753 ggccacgctgttctcgaactcctgacctcaggtgatccgctcacctcagcctcccaaagtgctgggattacagtcatgagccaccgcacccgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954187 93 - 16982598 ggccaggctgttctcgaactcctgacctcaggtgatccgctcacctcagcctcccaaagtgctgggattacagtcatgagccaccgcacccgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756158 93 - 3785965 ggccaggctgttctcgaactcctgacctcaggtgatccgctcacctcagcctcccaaagtgctgggattacagtcatgagccaccgtaccggg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90345985 93 - 90373283 ggccaggcgattcttgaactcctgacctcaggtgatccgcccacctcatcctcccaaagtgctgggattacagtcatgagccaccgcacccgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146901 93 - 179258 ggccaggctgttctcgaactcctgacctcaggtgatctgctcacctcagcctcccaaagtgctgggattacagtcatgagccaccgcacccgg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616297 93 - 5823884 ggccaggctgttctcgaactcctgacctcaggtgatcctcccacctcagcctcccaaagtgctgggattacagtcatgagccaccgcacccgg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101334 93 + 372756 ggccaggctggtctcgaactcctgacctcaggtgatctgcccaccttggcctccgaaagtgctgggactataggcatgagcccctgctcctgg i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335121 93 + 16356641 ggccaggctggtcttgaactcctgacctcaggtgatccgcctggcttggcctcccaaagtgctgggattacaggcatgagcccttgctcccgg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209697 93 + 1231380 ggccaggctggtcttgaactccagacctcaggtgatccgcctggcttggcctcccaaagtgctgggattgtaggcatgagctcctgctcccgg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737084 93 + 11732439 ggccaggctagtctcgaactcctgacctcaggtgatccgcccacctcggcctcccaaagtgctgggattacaggcatgatcccctgctcccgg i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e canFam3.chr24 47653673 264 + 47698779 I e mm10.chr2 181842029 145 + 182113224 I e micMur3.chr18 56921820 226 + 57149010 I e dasNov3.JH569290 321092 4 - 397369 I e otoGar3.GL873542 22903199 0 + 22939663 C a score=49856.000000 s hg38.chr20_KI270870v1_alt 168278 4 + 183433 ccta s panTro5.chr20 66503696 4 + 66533130 ccta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170913 4 + 62195757 ccta i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557348 4 - 578057 ccta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078832 4 - 110113093 ccta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818669 4 - 92844088 ccta i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484339 4 + 96509753 ccTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954280 4 - 16982598 ccta i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756251 4 - 3785965 ccta i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346078 4 - 90373283 ccTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146994 4 - 179258 ccta i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616390 4 - 5823884 ccta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101427 4 + 372756 ccta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335214 4 + 16356641 ccta i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209790 4 + 1231380 ccta i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737177 4 + 11732439 ccTA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22903199 4 + 22939663 ctta i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e canFam3.chr24 47653673 264 + 47698779 I e mm10.chr2 181842029 145 + 182113224 I e micMur3.chr18 56921820 226 + 57149010 I e dasNov3.JH569290 321092 4 - 397369 I a score=327559.000000 s hg38.chr20_KI270870v1_alt 168282 31 + 183433 aatttgaatttcaaataaacgtcaaataact s panTro5.chr20 66503700 31 + 66533130 aatttgaatttcaaataaacgtcaaataact i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170917 31 + 62195757 aatttgaatttcaaataaacgtcaaataact i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557352 31 - 578057 aatttgaatttcaaataaacgtcaaataatt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078836 31 - 110113093 aattggaatttcaaataaacatcaaataatt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818673 31 - 92844088 aatttgaatttcaaataaatctcaaataatt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484343 31 + 96509753 AATTTGAATTTCAAATAAATCTCAAATAATT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954284 31 - 16982598 aatttgaatttcaaataaatctcaaataatt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756255 31 - 3785965 aatttgaatttcaaataaatctcaaataatt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346082 31 - 90373283 AATTTGAATTTCAAATAAATATCAAATAATT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 146998 31 - 179258 aatttgaatttcaaataaatctcaaataatt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616394 31 - 5823884 aatttgaatttcagataaatatcaaataatt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101431 31 + 372756 aatgagaatttcaaataaacatcaaacaatt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335218 31 + 16356641 aattagaatttcaaataaacatcaaacaatt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209794 31 + 1231380 aattagaatttcaaataaacatcaaacaatt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737181 31 + 11732439 AATTAGAATTTCAAATAAACATCAAACAATT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22903203 25 + 22939663 aatttgaagttcatatactta------attt i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 321096 31 - 397369 aatatgaatttccaataagtaacaaataatt i dasNov3.JH569290 I 4 C 0 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e canFam3.chr24 47653673 264 + 47698779 I e mm10.chr2 181842029 145 + 182113224 I e micMur3.chr18 56921820 226 + 57149010 I a score=64819.000000 s hg38.chr20_KI270870v1_alt 168313 10 + 183433 -tttagtat-TG s panTro5.chr20 66503731 10 + 66533130 -tttagtat-TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170948 10 + 62195757 -tttagtat-TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557383 10 - 578057 -tttagtat-TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078867 10 - 110113093 -tttagtat-TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818704 10 - 92844088 -tttAGTGG-TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484374 10 + 96509753 -TTTAGTGG-TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954315 10 - 16982598 -tttAGTGG-TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756286 10 - 3785965 -tttAGTGA-TG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346113 10 - 90373283 -TTTAGTGG-TG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147029 10 - 179258 -tttAGTGG-TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616425 10 - 5823884 -tttAGTGT-TG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101462 7 + 372756 -tttag----ta i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335249 7 + 16356641 -tttag----ta i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209825 7 + 1231380 -tttag----ta i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737212 4 + 11732439 -TT-------TA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22903228 10 + 22939663 -tttagtat-TG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47653937 10 + 47698779 -TTTGATAT-TA i canFam3.chr24 I 264 C 0 s dasNov3.JH569290 321127 12 - 397369 ttttagtatGTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e mm10.chr2 181842029 145 + 182113224 I e micMur3.chr18 56921820 226 + 57149010 I a score=46596.000000 s hg38.chr20_KI270870v1_alt 168323 3 + 183433 TTG s panTro5.chr20 66503741 3 + 66533130 TTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170958 3 + 62195757 TTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557393 3 - 578057 CTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078877 3 - 110113093 TTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818714 3 - 92844088 TTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484384 3 + 96509753 TTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954325 3 - 16982598 TTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756296 3 - 3785965 TTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346123 3 - 90373283 TTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147039 3 - 179258 TTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616435 3 - 5823884 TTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101469 3 + 372756 tTG i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335256 3 + 16356641 tTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209832 3 + 1231380 tTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737216 3 + 11732439 TTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56922046 3 + 57149010 TTG i micMur3.chr18 I 226 C 0 s otoGar3.GL873542 22903238 3 + 22939663 TTG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47653947 2 + 47698779 -TA i canFam3.chr24 C 0 I 9 s dasNov3.JH569290 321139 3 - 397369 TTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1912310 91 - 2029793 I e mm10.chr2 181842029 145 + 182113224 I a score=398021.000000 s hg38.chr20_KI270870v1_alt 168326 35 + 183433 TTTAC---------CT----------------TAATTTCCAATTGAACTGGGA-------TTTTTTT s panTro5.chr20 66503744 35 + 66533130 TTTAC---------CT----------------TAATTTCCAATTGAACTGGGA-------TTTTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170961 35 + 62195757 TTTAC---------CT----------------TAATTTCCAATTGAACTGGGA-------TTTTTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557396 35 - 578057 TTTAC---------CT----------------TAATTTCCAATTGAACTGGGA-------TTTTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078880 35 - 110113093 TTTAC---------CT----------------TAATTTCCAATTGAATTGGGA-------TTTTTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818717 36 - 92844088 TTTAC---------CT----------------GAATTTCCAATGGAACTGGGA------TTTTTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484387 36 + 96509753 TTTAC---------CT----------------GAATTTCGAGTGGAACTGGGA------TTTTTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954328 36 - 16982598 TTTAC---------CT----------------GAATTTCCAATGGAACTGGGA------TTTTTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756299 36 - 3785965 TTTAC---------CT----------------GAATTTCCAATGGAACTGGGA------TTTTTTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346126 37 - 90373283 TTTAC---------CT----------------GAATTTCCAATGGAACTGGGA-----TTTTTTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147042 36 - 179258 TTTAC---------CT----------------GAGTTTCCAATGGAACTGGGA------TTTTTTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616438 37 - 5823884 TTTAC---------CT----------------TATTTTCCAATCGAACTGGGA-----TTTTTTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101472 35 + 372756 TTTAC---------TT----------------GAATTTTCAGTTGAACTGAGA-------TTTTTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335259 37 + 16356641 TTTGC---------TT----------------GAATTTTCAGTTGAACTGAGA-----TTTTTTTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209835 35 + 1231380 TTTAC---------TT----------------GAATTTTCAATTGAACTGAGA-------TTTTTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737219 36 + 11732439 TTTAC---------TT----------------GAATTTTCAATTGAACTGAGA------TTTTTTTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56922049 35 + 57149010 CTTAC---------CT----------------GAATTTCTAATTGAACTGAGA-------TTTTTTT i micMur3.chr18 C 0 I 80 s proCoq1.NW_012150197v1 1912401 35 - 2029793 TTTAC---------CT----------------GAATTTCTAATTGAACTGGGA-------TTTTTTT i proCoq1.NW_012150197v1 I 91 I 2 s otoGar3.GL873542 22903241 44 + 22939663 AATACTAAAAAATACT----------------GAATTTCTAATAGAACTGGGA-------TTTTTTT i otoGar3.GL873542 C 0 I 4 s mm10.chr2 181842174 38 + 182113224 tttac---------cctt------------tgggatatccctctgacccTAGA-------ATTTCC- i mm10.chr2 I 145 C 0 s canFam3.chr24 47653958 43 + 47698779 CTTAC---------TTCTGGATGGAAATAATAGAATTTCATATTTAAC------------TTTT--- i canFam3.chr24 I 9 C 0 s dasNov3.JH569290 321142 42 - 397369 TTTAC---------TT----------------GCATTTCAGATTTAACCGGGAATATGTTTTTTGTT i dasNov3.JH569290 C 0 C 0 a score=223736.000000 s hg38.chr20_KI270870v1_alt 168361 16 + 183433 TCCTTC-------------TAAATCTGGC s panTro5.chr20 66503779 16 + 66533130 TCCTTC-------------TAAATCCGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62170996 16 + 62195757 TCCTTC-------------TAAATCTGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557431 16 - 578057 TCCTTC-------------TAAATCTGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078915 16 - 110113093 CTCTTC-------------TAAATCTGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818753 16 - 92844088 TCCTTC-------------TAAATCTAGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484423 16 + 96509753 TCCTTC-------------TAAATCTAGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954364 16 - 16982598 TCCTTC-------------TAAATCTAGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756335 16 - 3785965 TCCTTC-------------TAAATCTAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346163 16 - 90373283 TCCTTC-------------TAAATCTAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147078 16 - 179258 TCCTTC-------------TAAATCTAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616475 16 - 5823884 TCCTTC-------------TAAATCTAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101507 16 + 372756 TCCTTC-------------TAAATCTGGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335296 16 + 16356641 TCCTTC-------------TAAATCTGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209870 16 + 1231380 TTCTTC-------------TAAGTCTGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737255 16 + 11732439 TCCTTC-------------TAAATCTGGC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1912438 16 - 2029793 TTTTTC-------------TAAATCTGGC i proCoq1.NW_012150197v1 I 2 I 57 s otoGar3.GL873542 22903289 16 + 22939663 TTCTTC-------------TAAATCTGGT i otoGar3.GL873542 I 4 C 0 s mm10.chr2 181842212 15 + 182113224 -ACTCC-------------CAATACTGGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47654001 15 + 47698779 TCCTTC-------------TGAATTTGG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 321184 29 - 397369 TTGTTCTGTTTTTATGAGGTAAATCTGGG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56922084 80 + 57149010 I a score=441252.000000 s hg38.chr20_KI270870v1_alt 168377 48 + 183433 ATCTCTGGGTGGGGCAGGGGATGAGGTGGGTGTTGACAAAAGATA----ATC------ s panTro5.chr20 66503795 48 + 66533130 ATCTCTGGGTGGGGCAGGGGATGAGGTGGGTGTTGACAAAAGATA----ATC------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171012 48 + 62195757 ATCTCTGGGTGGGGCAGGGGATGAGGTGGGTGTTGACAAAAGATA----ATC------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557447 52 - 578057 ATCTCTGGGTGGGGCAGGGGATGAGGTGGGTGTTGACAAAAGATAATCTATC------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078931 48 - 110113093 ATCTCTGGGTGGGGCAGGGGATGAGGTGGGTGTTGACAAAAGATT----ATC------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818769 48 - 92844088 ATCTCTGGGTGGGGCGGGGGATGAGGTGGGTGTTGACAAAAGATA----GTC------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484439 48 + 96509753 ATCTCTGGGTGGGGCGGGGGATGAGGTGGGTGTTGACAAAAGATA----GTC------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954380 48 - 16982598 ATCTCTGGGTGGGGCGGGGGATGAGGTGGGTGTTGACAAAAGATA----GTC------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756351 48 - 3785965 ATCTCTGGGTGGGGCGGGGGATGAGGTGGGTGTTGACAAAAGATA----GTC------ i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90346179 48 - 90373283 ATCTCTGGGTGGGGCGGGGGATGAGGTGGGTGTTGACAAAAGATA----GTC------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147094 48 - 179258 ATCTCTGGGTGGGGCGGGGGATGAGGTGGGTGTTGACAAAAGATA----GTC------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616491 48 - 5823884 ATCTCTGGGTGGGGCGGGGGATGAGGTGGGTGTTGACAAAAGATA----GTC------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101523 38 + 372756 AATTCTGGGT------GGTGGTGAGGTAGGTGTTGACAGAAGAT-------------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335312 38 + 16356641 AACTCTGGGT------GGTTGTGAGGTGGGTGTTGACAAAAGAT-------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209886 38 + 1231380 AACTCTGGGT------GGTGGTGAGGTGGGTGTTGACAAAAGAT-------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737271 38 + 11732439 AACTCTGGGT------GATGGTGAGGTGGGTGTTGACAAAAGAT-------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22903305 38 + 22939663 ATCTCT----------GGGGTTGAGGTAGATGTTGAGAAAAGGTA----TTC------ i otoGar3.GL873542 C 0 I 6 s mm10.chr2 181842227 39 + 182113224 ATCTTTG---------GAGGGTGAAGTAGTTATTGACAAAACATA----CTC------ i mm10.chr2 C 0 I 7 s canFam3.chr24 47654016 27 + 47698779 ---------------------GCAGGTGGGTGCTGACAAAATACA----TCC------ i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 321213 46 - 397369 ATCCCCTG--------GGGAGTTAGGTGGGTGTTGACAAAATGTA----TTCCATCTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1912454 57 - 2029793 I e micMur3.chr18 56922084 80 + 57149010 I a score=821443.000000 s hg38.chr20_KI270870v1_alt 168425 50 + 183433 TATTATTTTCAGAATTCAGAATTTCA-----AATTGGTATCTGTTTAGAACTTC--T s panTro5.chr20 66503843 50 + 66533130 TATTATTTTCAGAATTCAGAATTTCA-----AATTGGTATCTGTTTAGAACTTC--T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171060 50 + 62195757 TATTATTTTCAGAATTCAGAATTTCA-----AATTGGTATCTGTTTAGAACTTC--T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557499 50 - 578057 TATTATTTTCAGAATTCAGAATTTCA-----AATTGGTATCTGTTTAGAACTTT--T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110078979 50 - 110113093 TATTATTTTCAGAATTCAGAATTTCA-----AATTGGTATCTGTTTAGAACTTT--G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818817 50 - 92844088 TATTATTTTCAGAATTCAGAATTCGA-----AAGTGGTATCTGTTTAGAACTTT--T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484487 50 + 96509753 TATTATTTTCAGAATTCAGAATTCGA-----AAGTGGTATCTGTTTAGAACTTT--T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954428 50 - 16982598 TATTATTTTCAGAATTCAGAATTCGA-----AAGTGGTATCTGTTTAGAACTTT--T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756400 50 - 3785965 TATTATTTTCAGAATTCAGAATTCGA-----AAGTGGTATCTGTTTAGAACTTT--T i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90346227 52 - 90373283 TATTATTTTCAGAATTCAGAATTCGA-----AAGTGGTATCTGTTTAGAACTTTTAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147142 50 - 179258 TATTATTTTCAGAATTCAGAATTCAA-----AAGTGGTATCTGTTTAGAACTTT--T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616539 50 - 5823884 TATTATTTTCAGAATTCAGAATTTGA-----AAGTGGTATCTGTTTAGAACTTT--T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101561 50 + 372756 TATTATTTTCAGAATTCAGCATTTGA-----AATTGGTATCTGTTTAGAACTTT--T i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335350 50 + 16356641 TATTATTTTCAGAATTCAGCATTTGA-----AATCAGTATCTGTTTAGAACTGT--T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209924 50 + 1231380 TATTATTTTCAGAAATCAGCATTTGA-----AATTGGTATCTGTTTAGAACTTT--T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737309 50 + 11732439 TATTATTTTCAGAATTCAGCATTTGA-----AATTGGTATCTGTTTAGAACTTT--T i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56922164 50 + 57149010 TATTATTTTCAGAATTCAGAATTTGA-----AATCGATATGTGTTTAGGACTGT--T i micMur3.chr18 I 80 C 0 s proCoq1.NW_012150197v1 1912511 50 - 2029793 TATTATTTTCAGAATTCAGAATTTGA-----AATTGATATGTGTTTAGAACCGT--T i proCoq1.NW_012150197v1 I 57 C 0 s otoGar3.GL873542 22903349 50 + 22939663 TATTATTTTCTGAATTCAGAATTTGA-----AATTGATATATGTTTAAAACTGT--T i otoGar3.GL873542 I 6 I 111 s mm10.chr2 181842273 49 + 182113224 TATTACATTCAGAACTGAGAATTTGG-----AAATAGCATATATTTAGAGATTT--- i mm10.chr2 I 7 C 0 s canFam3.chr24 47654049 50 + 47698779 TGATATTTTCAGAATTCAGAATTTGA-----AATTGGCATGTTACTAGAACTTT--A i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 321259 55 - 397369 TATTATTTTCAGAATTCAGAATTTGATGTGTAGTTGAACTGTGTTTAGAACTTT--T i dasNov3.JH569290 C 0 C 0 a score=7986453.000000 s hg38.chr20_KI270870v1_alt 168475 423 + 183433 ATTGT------TCTGCTCTTACCTTTAACATAAATCGCTCTTTTTAAACATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCAGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTATCTCAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT s panTro5.chr20 66503893 423 + 66533130 ATTGT------TCTGCTCTTACCTTTAACATAAATTGCTCTTTTTAAACATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAACTGGTAGAGCAGGCTTTCAGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTATCTCAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171110 423 + 62195757 ATTGT------TCTGCTCTTACCTTTAACATAAATCGCTCTTTTTAAACATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAACTGGTAGAGCAGGCTTTCAGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTATCTCAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557549 423 - 578057 ATTGT------TCTGCTCTTACCTTTAACATAAATCGCTCTTTTTAAACATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAACTGGTAGAGCAGGCTTTCAGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGCGGCACTGGGTATCTCAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079029 423 - 110113093 ATTGT------TCTGCTCTTACCTTTAACGTAAATCACTCTTTTTAAAAATTTTTAGTTATAGTATTGCCTAAGTGTGATCTTGAA---CATGGGCGGTGCCGTGAGTGCTGGCGAAGACAATGACGAGCTGATAGACAACTTGAAAGAAGCGCAGTATATCCGCACGGAGCTGGTAGAGCAGGCTTTCAGAGCCATCGATCGCGCAGACTATTACCTTGAAGAATTTAAAGAAAATGCATATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGCACTGGGTATCTCAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGGAGGAGAGTCTGA-AAAC---------------------TCATCTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92818867 423 - 92844088 ATTGT------TCTGCTCTTACTTTTAACATAAACCACTCTTTTTAAAAATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCATGCATCTATTCAGAGGTGATGGAAGCCTTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGCACTGGGTACCTGAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484537 423 + 96509753 ATTGT------TCTGCTCTTACTTTTAACATAAACCACTCTTTTTAAAAATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCATGCATCTATTCAGAGGTGATGGAAGCCTTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGCACTGGGTACCTGAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954478 423 - 16982598 ATTGT------TCTGCTCTTACTTTTAACATAAACCACTCTTTTTAAAAATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCATGCATCTATTCAGAGGTGATGGAAGCCTTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGCACTGGGTACCTGAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756450 423 - 3785965 ATTGT------TCTGCTCTTACTTTTAACATAAACCACTCTTTTTAAAAATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCATGCATCTATTCAGAGGTGATGGAAGCCTTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGCACTGGGTACCTGAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346279 423 - 90373283 ATTGT------TCTGCTCTTACTTTTAACATAAACCACTCTTTTTAAAAATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATCCACCTCTCAGCCCCATGCATCTATTCAGAGGTGATGGAAGCCTTAGATCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTACCTGAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147192 423 - 179258 ATTGT------TCTGCTCTTACTTTTAACATAAACCACTCTTTTTAAAAATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCATGCATCTATTCAGAGGTGATGGAAGCCTTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGCACTGGGTACCTGAGCTCCATGGTGGGCCTCATTCTAGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5616589 423 - 5823884 ATTGT------TCTGCTCTTACCTTTAACATAAATCACTCTTTTTAAAAATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAGGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCATGCATCTATTCAGAGGTGATGGAAGCCTTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGCACTGGGTACCTGAGCTCCATGGTGGGCCTCATTCTCGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCCGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 101611 423 + 372756 ATTGT------TCTGCTCTTACCTTTAACATATATAGCTCtttttaaaaatttttaattataGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAACTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCCGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCATGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGCACTGGGTACCTCAGCTCCATGGTGGGCCTCATTCTGGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335400 423 + 16356641 ATTGT------TCTGCTCTTACCTTTAACATAAATAGCTCtttttaaaaatttttaattataGTATTGCCTAAGTGTCATCTTGAA---CATGGGCGGTGCTGTGAGTGCCGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCGCAGTATATCCGGACTGAACTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCCGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTGGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGTACTGGGTACCTCAGCTCCATGGTGGGCCTCATTCTGGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1209974 423 + 1231380 ATTGT------TCTGCTCTTACCTTTAACATAAATAGCTCTTTTTAAAAATTTTTGATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGATAATTTGAAAGAAGCACAGTATATCCGGACTGAACTGGTAGAGCAGGCTTTCCGAGCTGTCGATCGTGCTGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGTACTGGGTACCTCAGCTCCATGGTGGGCCTCATTCTGGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737359 423 + 11732439 ATTAT------TCTGCTCTTACCTTTGACATAAATAGCTCTTTTTAAAAATTTTTAATTATAGTATTGCCTAAGTGTAATCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGTGAAGACAATGATGAGCTGATAGACAATTTGAAAGAAGCACAGTATATCCGGACTGAACTGGTAGAGCAGGCTTTCCGAGCTATCGATCGTGCCGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGACTTGGCATGGAAGCATGGAAACATTCACCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTAGATCTGCAGCCTGGACTCTCATTTCTGAACCTGGGCAGTGGCACTGGGTACCTCAGCTCCATGGTGGGCCTCATTCTGGGTAAGTGTGGAAGGAGAGTCTGA-AAAC---------------------TCATCTGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56922214 422 + 57149010 ATTGT------TCTGCTCATACCTTTAATGTAAATAGCTC-TTTTAAAAATGTTTAATCGTAGTATTGCCCAAGTGTAATCTTGAA---CATGGGTGGTGCTGTGAGTGCTGGTGAGGACAACGATGAACTGATAGACAATTTGAAAGAAGCACAGTATATCCGGACTGAGCTGGTAGAGCAGGCTTTCCGAGCTATTGATCGTGCAGACTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAGGACTTGGCGTGGAAGCATGGAAACATTCACCTTTCGGCCCCATGCATCTACTCGGAGGTGATGGAAGCCCTGGATCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTACCTCAGCTCTATGGTGGGCCTCATTCTAGGTAAGTCTAGAAAGGGAGTCTAA-AAGC---------------------TCATCTGT i micMur3.chr18 C 0 I 92 s proCoq1.NW_012150197v1 1912561 424 - 2029793 ATAGT------TCTGGTCATACCTTTAATGTAAATAGCTC-TTTTAAAAATGTTTAATTGTAGTATTGCCCAAGTGTGATCTCAGACACCATGGGTGGTGCTGTGAGCGCTGGCGAGGACAACGACGAGCTGATAGACAACTTGAAAGAAGCGCAGTATATCCGCACCGAGCTGGTAGAGCAGGCTTTCCGAGCTATCGACCGTGCGGATTATTATCTTGAAGAATTCAAAGAAAATGCTTATAAAGACTTGGCGTGGAAGCATGGAAACATTCACCTTTCGGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTGGATCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTACCTCAGCTCTATGGTGGGCCTCATTCTGGGTAAGTCT-GGAAGAGAGTCTAA-AAGC---------------------TCATCTGT i proCoq1.NW_012150197v1 C 0 I 89 s otoGar3.GL873542 22903510 422 + 22939663 ATTGT------TCTGCTCATACCTGTAATGTAAATGGCTC-TTTTTAAAATGTTTAATTGTAGTATTTCCTAAGTGCAATCTTGAA---CATGGGTGGTGCTGTGAGTGCTGGTGAAGACAATGACGAGCTGATCGACAATTTGAAAGAAGCACAGTATATCCGCACTGAGCTGGTGGAGCAGGCTTTCCGAGCAATTGATCGTGCAGATTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGATTTGGCATGGAAGCATGGAAACATTCATCTTTCAGCCCCGTGCATCTACTCGGAGGTGATGGAAGCCCTGGACCTGCAGCCTGGACTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTATCTCAGCTCCATGGTGGGCCTCATTCTAGGTAGGTCTGGGAAGAGAGTATGA-AAGC---------------------TTGTTTGT i otoGar3.GL873542 I 111 C 0 s mm10.chr2 181842322 417 + 182113224 GTTTT------TTTGCTCTTGCCCTTAATGTAAATAGTTATT-----GAAATTTTAATTGTAGCCTTGCTTGGCTGTGACCTTGAA---CATGGGCGGTGCTGTGAGTGCTGGGGAGGACAACGATGAGCTCATTGATAACTTGAAGGAAGCCCAGTACATCCGGACGGACTTAGTAGAGCAGGCTTTCCGCGCTATTGATCGAGCAGATTATTATCTTGAAGAATTTAAAGAAAATGCATACAAAGACTTGGCATGGAAACATGGAAATATTCATCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAGGCTCTGGATCTGCAGCCTGGGCTTTCATTTCTGAATTTGGGCAGTGGTACTGGCTACCTCAGCTCCATGGTGGGGCTCATTCTAGGTGAGTGTGGATACAGAG-CTTT-AGTC---------------------CCCTCTGC i mm10.chr2 C 0 C 0 s canFam3.chr24 47654099 423 + 47698779 ACTGT------TGTGCTCTTACCGTCGATGTAAATAGCTT-TTTAAAACATTTTTAATTACAGTATTGCCTAAGCGTGATCTTGAA---GATGGGAGGTGCTGTGAGTGCTGGTGAAGACAACGATGAGCTGATAGACAATCTGAAGGAAGCACAGTACATCCGGACCGAGCTAGTAGAGCAAGCTTTCCGAGCTATCGACCGCGCAGATTATTATCTTGAAGAATTTAAGGAAAACGCTTATAAAGACTTGGCGTGGAAGCATGGAAACATCCACCTCTCGGCCCCTTGCATCTACTCAGAAGTGATGGAAGCCCTCGACCTGCAGCCGGGGCTCTCCTTCTTAAACCTGGGCAGTGGCACGGGCTACCTCAGCTCGATGGTGGGGCTCATTCTAGGTAAATCTGCGGGGAGTATGGGAGAGAC---------------------GAGTCTGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 321314 442 - 397369 ATTGTTCTTTGTCTGTTCTTTCTTCTT-TGTGAACAGCTCTCCTT-------TTTAATTGCAGTGCTGCCTAAGTGTAATCTTGAA---GATGGGAGGTGCTGTAAGTGCGGGAGAAGACAACGATGAGCTGATAGATAATTTGAAAGAAGCACAGTACATACGGACTGAACTGGTGGAGCAGGCTTTCCGAGCTATTGATCGTGCAGATTATTATCTTGAAGAATTTAAAGAAAATGCTTATAAAGATTTGGCGTGGAAGCATGGCAACATTCACCTCTCTGCCCCATGCATATACTCTGAGGTGATGGAAGCTTTGGACCTTCAGCCTGGGCTCTCGTTTCTGAACCTGGGCAGTGGCACTGGGTACCTCAGCTCCATGGTTGGACTCATTTTAGGTAAATTTGGAAAGAGGATTTGG-AGGCATTCTGCTGTCAAAATTCCATTTATCttt i dasNov3.JH569290 C 0 C 0 a score=961090.000000 s hg38.chr20_KI270870v1_alt 168898 101 + 183433 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------ATCTCCTTTG--ACAGAAAATGTAGTCTGCTAATGGCCTGCC-----TGGGTCGAGACCGCA-------------GCCTTCCCAGTAGTTATCTGACATTG-----ACACA s panTro5.chr20 66504316 101 + 66533130 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------ATCTCCTTTG--ACAGAAAATGTCGTCTGCTAATGGCCTGCC-----TGGGTCGAGACCGCA-------------GCCTTCCCAGTAGTTATCTGACGTTG-----ACACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171533 101 + 62195757 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------ATCTCCTTTG--ACAGAAAATGTCGTCTGCTAATGGCCTGCC-----TGGGTCGAGACCGCA-------------GCCTTCCCAGTAGTTATCTGACGTTG-----ACACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 557972 101 - 578057 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------ATCTCCTTTG--ACAGAAAATGTAGTCTGCTAATGGCCTGCC-----TGGGTCGAGACCGCA-------------GGCTTCCCAGTAGTTATCTGACGTTG-----ACACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079452 101 - 110113093 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------ATCTCCTTTG--ACAGAAAATGTAGTCTGCTAATGGCCTGCC-----TGGGTGGAGACCACA-------------GCCTTCCCAGTAGTTATCTGACGTTG-----ACACA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819290 101 - 92844088 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------GTCTCCTTTG--ACAGAAAATGTAGTCTGCTAATGGCCCGCC-----TGGGTCGAGACCCCA-------------GCCTTCCCAGTAGTTATCTGACGTTG-----ACATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96484960 101 + 96509753 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------ATCTCCTTTG--ACAGAAAATGTAGTCTGCTAATGGCCCGCC-----TGGGTCGAGACCCCA-------------GCCTTCCCAGTAGTTATCTGACGTTG-----ACATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16954901 101 - 16982598 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------GTCTCCTTTG--ACAGAAAATGTAGTCTGCTAATGGCCCGCC-----TGGGTCGAGACCCCA-------------GCCTTCCCAGTAGTTATCTGACATTG-----ACATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756873 101 - 3785965 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------GTCTCCTTTG--ACAGAAAATGTAGTCTGCTAATGGCCCGCC-----TGGGTCGAGACCCCA-------------GCCTTCCCAGTAGTTATCTGACGTTG-----ACATA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346702 101 - 90373283 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------GTCTCCTTTG--ACAGAAAATGTAGGCTGCTGATGGCCCGCC-----TGGGTCGAGACCCCA-------------GCCCTCCCAGTAGTTATCTGACGTTG-----ACACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147615 101 - 179258 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------GTCTCCTTTG--ACAGAAAATGTAGTCTGCTAATGGCCCGCC-----TGGGTCGAGACCCCA-------------GCCTTCCCAGTAGTTATCTGACATTG-----ACATA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617012 101 - 5823884 ----------------------------CTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------GTCTCCTTTG--ACAGAAAATGTAGTCTGCTAATGGCCCGCC-----TGGGTCGAGACCCCA-------------GCCTTCCCAGTAGTTATCTGATGTTG-----ACACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102034 101 + 372756 ----------------------------TTCAGGGAAG---TAGGC---------------------------------------------------------------------------------------------ACCTACTTTG--ACAGAAAATATAGTCTGCTGATGGGCTGCC-----TGGGTAGAGACCACA-------------GCCTTTTCAGTAGTTACCTGACGTTG-----ACCCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335823 100 + 16356641 ----------------------------GTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------ATCTCCTTTG--ACAGAAAACATAGTCTGCCGACGGCCCGCC-----TGGACCGAGACCACA-------------GCCTTCTTAGTAGTTACCTGA-GTTG-----ACACA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1210397 101 + 1231380 ----------------------------TTCAGGGACG---GAGGC---------------------------------------------------------------------------------------------ATCTCCTTTG--ACAGAAAATGTAGTCTGCTGATGGCCCACC-----TGGGTGGAGACCACA-------------GCCTTCCCAGTAGTTACCTGACGTTG-----ACACA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737782 101 + 11732439 ----------------------------TTCAGGGAAG---GAGGC---------------------------------------------------------------------------------------------ATCTCCTTTG--ACAGAAGATGTAGTCTGCTGATGGCCCGCC-----TGGGTAGAGACCACA-------------GCCTTCCCAGTAGTTACCTCACGTTG-----ACACA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22903932 91 + 22939663 ----------------------------CCCAGGGCAG---GAGGC---------------------------------------------------------------------------------------------G-ATTCTTCC--ACAGAAAGTACAG-CTGTGGGTGGCTAGCC-----CTGGTGGACA--------------------CTTCTTAGCAGTTA-CTGGTGTTG-----ACACA i otoGar3.GL873542 C 0 I 5 s mm10.chr2 181842739 96 + 182113224 ----------------------------CTTAGGACAAC-TTGGTT---------------------------------------------------------------------------------------------TTCACTTTAG--GTAGAAGGCTTTGTGGGCTGGTTGCATACC-----CTGTTGGAGATCACG-------------GTCCTCCTATTAGTTGGCTGAAAG------------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47654522 73 + 47698779 ------------------------------------TG---GCAGT---------------------------------------------------------------------------------------------GTTTCCTCTG--TAGGGAC-----------------CTTGTC-----TCATT---GCCCTTG-------------GCCTTCTGAGCCGTGGTCTGGGTCTG-----GTATC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 321756 250 - 397369 ttcttttttttcttttttttaatgttacattaaaaaaatatgaggtccccatatagtccccaccctgctcagcccactcctcccacatcaacaacctctttcatcatcgtggcacatTTCTCTTACAATGCTGGACATGGTCTCCTTAAGTAGAGAAAATGCAGTCTGTTGACAACATGTCTTCTGTGAATGCAGACTGCGTCTAACGCAACTTGGCCGTCCAGCAGGTTTCCAGTGTTGTTCATACATA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1912985 89 - 2029793 I e micMur3.chr18 56922636 92 + 57149010 I a score=17557.000000 s hg38.chr20_KI270870v1_alt 168999 2 + 183433 TC- s panTro5.chr20 66504417 2 + 66533130 TC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171634 2 + 62195757 TC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558073 2 - 578057 TC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079553 2 - 110113093 TC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819391 2 - 92844088 TC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485061 2 + 96509753 TC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955002 2 - 16982598 GC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756974 2 - 3785965 TC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346803 2 - 90373283 TC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147716 2 - 179258 TC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617113 2 - 5823884 TC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102135 2 + 372756 TC- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335923 2 + 16356641 TC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1210498 2 + 1231380 TC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737883 2 + 11732439 TC- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1913074 2 - 2029793 TC- i proCoq1.NW_012150197v1 I 89 C 0 s otoGar3.GL873542 22904028 2 + 22939663 CC- i otoGar3.GL873542 I 5 C 0 s canFam3.chr24 47654596 2 + 47698779 TT- i canFam3.chr24 I 1 I 3 s dasNov3.JH569290 322006 2 - 397369 -CT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181842835 0 + 182113224 C e micMur3.chr18 56922636 92 + 57149010 I a score=334121.000000 s hg38.chr20_KI270870v1_alt 169001 24 + 183433 ACTGGGTGGTGGATAGAGGGATGA------- s panTro5.chr20 66504419 24 + 66533130 ACTGGGTGGTGGATAGAGGGATGA------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171636 24 + 62195757 ACTGGGTGGTGGATAGAGGGATGA------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558075 24 - 578057 ACCGGGTGATGGACAGAGGGATGA------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079555 24 - 110113093 ACTGGGTGGTGGATAGAGCGATGA------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819393 24 - 92844088 ACTGGGTGGTGGATGGAGGGATAA------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485063 24 + 96509753 ACTGGGTGGTGGATGGAGGGATGA------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955004 24 - 16982598 ACTGGGTGGTGGATGGAGGGATGA------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3756976 24 - 3785965 ACTGGGTGGTGGATGGAGGGATGA------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346805 24 - 90373283 ACTGGGTGGTGGATGGAGGGATGA------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147718 24 - 179258 ACTGGGTGGTGGATGGAGGGATGA------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617115 24 - 5823884 ACTGGGTGGTGGATGGAGAGATGA------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102137 24 + 372756 ACTGGGTGGTGGATAGAGCGATGA------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335925 24 + 16356641 ACCGGGTGGTGGACAGAGCAATGA------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1210500 24 + 1231380 ACTGGGTGGTGGATAGAGCGAGGA------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737885 24 + 11732439 ACTGGGTGGTGGATGGAGCGATGA------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56922728 24 + 57149010 ACTGGGTGGTGGATAGAGGGATGA------- i micMur3.chr18 I 92 C 0 s proCoq1.NW_012150197v1 1913076 24 - 2029793 ACTGGGTGGTGGGTAGAGGGATGA------- i proCoq1.NW_012150197v1 C 0 I 37 s otoGar3.GL873542 22904030 24 + 22939663 CCTGGGTGCTGGGCAGAGGGATGA------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181842835 21 + 182113224 --GAGGTGGTGGGT-GACTGATGA------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47654601 21 + 47698779 ATGGAGTCATCGGTGGGCTGG---------- i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 322008 31 - 397369 AATAGGAGTTGAGTGGATGGATATGGGATGG i dasNov3.JH569290 C 0 C 0 a score=389663.000000 s hg38.chr20_KI270870v1_alt 169025 38 + 183433 GGGAGGAAGGCCTGCATGCATCTCATGGGCCCCGGATT s panTro5.chr20 66504443 38 + 66533130 GGGAGGAAGGCCTGCATGCATCTCATGGGCCCCGGATT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171660 38 + 62195757 GGGAGGAAGGCCTGCATGCATCTCATGGGCCCCGGATT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558099 38 - 578057 GGGAGGAAGGCCTGCATGCATCTCATGGGCCCCAGATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079579 38 - 110113093 AGGAGGAAGGCCTGCATGCATCTCATGTGCCCCAGATT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819417 37 - 92844088 GGGAGGAAGGCCTGCATGCATCTCATG-GCCCCAGGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485087 37 + 96509753 GGGAGGAAGGCCTGCATGCATCTCATG-GCCCCAGGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955028 37 - 16982598 GGGAGGAAGGCCTGCATGCATCTCATG-GCCCCAGGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757000 37 - 3785965 GGGAGGAAGGCCTGCATGCATCTCATG-GCCCCAGGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346829 37 - 90373283 GGGAGGAAGGCCTGCATGCATCTCATG-GCTTCAGGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147742 37 - 179258 GGGAGGAAGGCCTGCATGCATCTCATG-GCCCCAGGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617139 37 - 5823884 GGGAGGAAGGCCTGCATGCATGTCATG-GCCCCAGGTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102161 38 + 372756 GGGAGGAAGGCCTGCATGGCTCTCTTGGGCCCCAGGTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335949 38 + 16356641 GGGAGGAAGGCCTGCATGGCTCTCTCGGGCACCAGGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1210524 38 + 1231380 GGGAGGAAGGCCTGCATGGCTCTCTTGGGCCCCAGGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737909 38 + 11732439 GGGAGGAAGGCCCGCACGGCTCTCTTAGGCCCCAGGTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56922752 37 + 57149010 -TGAAGGAAGCTTGTGTGCAGCTCACAGTCCCTGAGTT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22904054 37 + 22939663 -TGGAGGAAGCTTGTGTGCTCCTCACGGGTCCTGAGCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181842856 25 + 182113224 ------------TATATCCA-CTTGTGGGCTCTGAGTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47654622 20 + 47698779 TGAAGGGAGG------------------GCTTCAGGTT i canFam3.chr24 C 0 I 5 s dasNov3.JH569290 322039 36 - 397369 CAGAGGGGGCCCTGTGTGC--CTCAGGGGCCCTGAGTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913100 37 - 2029793 I a score=466295.000000 s hg38.chr20_KI270870v1_alt 169063 34 + 183433 ---------------CTCCAGA------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ s panTro5.chr20 66504481 34 + 66533130 ---------------CTCCAGA------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171698 34 + 62195757 ---------------CTCCAGA------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558137 34 - 578057 ---------------CTCCAGA------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079617 34 - 110113093 ---------------CTCCAGA------------GGGACC---TCTCCTGTTCTCTGTCCCATC------------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819454 34 - 92844088 ---------------CTCCAGG------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485124 34 + 96509753 ---------------CTCCAGG------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955065 34 - 16982598 ---------------CTCCAGG------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757037 34 - 3785965 ---------------CTCCAGG------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346866 34 - 90373283 ---------------CTCCAGG------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147779 34 - 179258 ---------------CTCCAGG------------GGGACC---TCTCCTGTTCTCTGTCCCCTC------------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617176 34 - 5823884 ---------------CTCCAGG------------GGGACC---TCTCCTGTTCTCTGTTCCCTC------------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102199 34 + 372756 ---------------CTCCAGA------------GGGACC---CCTCTTGTTCTCTGTCCCCTT------------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16335987 34 + 16356641 ---------------CTCCAGA------------GGGACC---CCTCTTGTTCTCTGTCCCCTC------------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1210562 34 + 1231380 ---------------CTCCAGA------------GGGACC---CCTCTTGTTCCCTGTCCCCTC------------ i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737947 34 + 11732439 ---------------CTCCAGA------------GGGACC---CCTCCTGTTCTCTGTCCCCTC------------ i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56922789 34 + 57149010 ---------------CTCCAGA------------GGGACC---TCTCCTGTTCCCTGTCTCCTC------------ i micMur3.chr18 C 0 I 1965 s proCoq1.NW_012150197v1 1913137 34 - 2029793 ---------------CTCCAGA------------GGGGCC---TCTCCTGTTCCCTGTCTCCTC------------ i proCoq1.NW_012150197v1 I 37 I 81 s otoGar3.GL873542 22904091 34 + 22939663 ---------------CAGTAGA------------GGTACC---TCTCCTGTTCCCTATCTCTTC------------ i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181842881 32 + 182113224 --------------------GT------------GGGGCTGGGGTGCCTTTTCTATGTCTCCTC------------ i mm10.chr2 C 0 I 1 s canFam3.chr24 47654647 12 + 47698779 -------------------GGA------------GGGATT---CCT------------------------------ i canFam3.chr24 I 5 C 0 s dasNov3.JH569290 322075 73 - 397369 TTCTAGCTGGACTTACTCTGGACTGTGTTTTCGCAGTACC---TCTCCTGATCCCTCTTCATTCCTGGACTATCTC i dasNov3.JH569290 C 0 C 0 a score=895057.000000 s hg38.chr20_KI270870v1_alt 169097 80 + 183433 TTCCTGTGC-TGC--CACAGCCTGTACTGCGCACC-TGCCCTC---TGGACAGCGGAGGATAAAGACAGTTGTGTAAATCTTGACCC s panTro5.chr20 66504515 80 + 66533130 TTCCTGTGC-TGC--CACAGCCTGTACTGCGCACC-TGCCCTC---TGGACAGCGGAGGATAAAGACAGTTGTGTAAATCTTGACCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171732 80 + 62195757 TTCCTGTGC-TGC--CACAGCCTGTACTGCGCACC-TGCCCTC---TGGGCAGCGGAGGATAAAGACAGTTGTGTAAATCTTGACCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558171 80 - 578057 TTCCTGTCC-TGC--CACCACCTGTACTGTGCACC-TGCCCTC---TGGACAGTGGAGGATAAAGACAGTTGTGTAAATCTTGACCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079651 80 - 110113093 TTCCTGTAC-TGC--CACAGCCTGTACCGTGCACC-TGCCCTC---TGGACAGCGGAGGACAAAGACAGTTGTGTAAATCTTGACCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819488 80 - 92844088 TGCCTGTAC-TGC--CACAGCCTGTACTGTGCACC-TGCCCTC---TGGACAGTGGAGGACAAAGACAGTTGTGTAAATCTTGACCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485158 80 + 96509753 Tgcctgtac-tgc--cacagcctgtactgtgcacc-tgccctc---tggacagtggaggacAAAGACAGTTGTGTAAATCTTGACCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955099 80 - 16982598 Tgcctgtac-tgc--cacagcctgtactgtgcacc-tgccctc---tggacaatggaggacAAAGACAGTTGTGTAAATCTTGACCC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757071 80 - 3785965 Tgcctgtac-tgc--cacagcctgtactgtgcacc-tgccctc---tggacagtggaggacAAAGACAGTTGTGTAAATCTTGACCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346900 80 - 90373283 Ggcctgtac-tgc--cacagcctgtactgtgcacc-tgccctc---tggacagtggaggacAAAGACAGTTGTGTAAATCATGACCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147813 80 - 179258 Tgcctgtac-cgc--cacagcctgtactgtgcacc-tgccctg---tggacagtggaggacAAAGACAGTTGTGTAAATCTTGACCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617210 80 - 5823884 Tgcctgtac-tgc--cacagcctgtactgtgcacc-tgccctc---tggacagtggaggacAAAGACAGTTGTGTAAATCTGGACCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102233 81 + 372756 TGCCTGAACTTGC--CACAGTCTGTACTGTGCACC-TGCCCTC---TGAACAGTGGAGAACAAAGACAGTTGTGTAAATCTTGACCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16336021 81 + 16356641 TGCCTGAACCTGC--CACGGTCTGAACTGTGCACC-TACCCTC---TGGACAGTGCAGAACAAAGACAGTCGTGTACATCTCGACCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1210596 81 + 1231380 TGCCTGAACTTCC--CACAGTCTGTACTGTGCACC-TACCCTC---TGGACAGTGGAGAACAAAGACCGTTGTGTAAATCTTGACCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2737981 81 + 11732439 TGCCTGAACTTGC--CACAGTCTGTACTGTGCGCC-TGCCCTC---TAGACGCTGGAGAACAAAGACAGTTGTGTAAATCTTGACCC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22904126 81 + 22939663 TACTTGCAC-TGC--CACAGTCTGTTCTTTGTGCCACTACCTC---TGGACAATGGAGGACCATGTGAGTTGTATAAATCTTAACCT i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181842914 64 + 182113224 TACCTATAC-TGC--TGCATTCTG----------C-TG--------TGAATGATGGAAAACAGCAA-AGGCCTGTAAATTTTAACCT i mm10.chr2 I 1 I 2 s canFam3.chr24 47654659 69 + 47698779 ------------C--CACTGCCTGTGCAGCACACC-CTCCTTC---TGGACAACACAGCACCTCAAGAATTATGTAAATTGGGGCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 322148 84 - 397369 CTCCCGTCT-GACTTCACAGTCTGGTCAGCAAACC-TTCCTTCTCATGGGTAGTACAGGAGAGCCAAAGACATG-AAAGCTTGACCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913171 81 - 2029793 I e micMur3.chr18 56922823 1965 + 57149010 I a score=993730.000000 s hg38.chr20_KI270870v1_alt 169177 84 + 183433 CACTGTGATTTCTCGATTTAATTTTATCACTCATTCTTCCTTGTCACTCCTTCTCTAAATCGATGGTAA--------TTAACTTGAAAGTCC s panTro5.chr20 66504595 84 + 66533130 CACTGTGATTTCTCGATTTAATTTTATCACTCATTCTTCCTTGTCACTCCTTCTCTAAATCGATGGTCA--------TTAACTTGGAAGTCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171812 84 + 62195757 CACTGTGATTTCTCGATTTAATTTTATCACTCATTCTTCCTTGTCACTCCTTCTCTAAATCGATGGTAA--------TTAACTTGAAAGTCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558251 84 - 578057 CACCGTGATTTCTCGATTTAATTTTATCACTCATTCTTCCTTGTCACTCCTTCTCTAAATCGATGGTAA--------TTAACTGGAAAGTCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079731 84 - 110113093 CACTATGATTTCTTGATTTAATTTTATCACTCAGTCTTCCTTGTCACTCTTTCTCTAAATTGATGGTAA--------TTAACTTTAAAGTCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819568 84 - 92844088 TGCTGTGATTTCTTGATTTAATTTTATCACTCAGTCTTCGTTGGCACTCCTTTTCTGAATCGATGGTAA--------TTAACTTTAAAGTCC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485238 84 + 96509753 CGCTGTGATTTCTTGATTTAATTTTATCACTCAGTCTTCGTTGGCACTCCTTTTCTGAATCGATGGTAA--------TTAACTTTAAAGTCC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955179 84 - 16982598 CGCTGTGATTTCTTGATTTAATTTTATCACTCAGTCTTCGTTGGCACTCCTTCTCTGAATCGAACGTAA--------TTAACTTCAAAGTAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757151 84 - 3785965 CGCTGTGATTTCTTGATTTAATTTTATCACTCAGTCTTCGTTGGCACTCCTTCTCTGAATCGATGGTAA--------TTAACTTTAAAGTCC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90346980 84 - 90373283 CACTGTGATTTCTTGATTTAATTTTATCACTCAGTCTTCCTTGGCACTCCTTCTCTAAATCGGTGGTAA--------TTAACTTTAAAGTCC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147893 84 - 179258 CGCTGTGATTTCTTGATTTAATTTTGTCACTCAGTCTTCGTTGGCACTCCTTCTCTGAATCGATGGTAA--------TTAACTTTAAAGTCC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617290 84 - 5823884 CACTGTGATTTCTTGATTTGATTTTATCACTCAGTCTTCCTTGGCACTCCTTCTCTAAATCGATGGGAA--------TTAACTTTAAAGTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102314 84 + 372756 CACTATGATTTCTTGATCCAATTTAATCACTCAGTCTCCCTTGTCACTCTTTCTCTAAACCAGTGAGAA--------TTAACTTTAAAGTCC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16336102 84 + 16356641 CACTACGATCTCTTGATTTAATTTAATCACTCAGTCTTCCTTGTCACTCGTTCTCTGAAGCAATGGTAA--------CTACCTTTCAAGTCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1210677 80 + 1231380 CCCTATGATTTCTTGATTTAATTTAA----TCAGTCTCCCTTGTCACTCTTTCTCTAAACCAATGATAA--------TTAACTTTAAAGTCC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738062 84 + 11732439 CACTGTGAGTTCTTGATTTAATTTAATCACTCAGTCTTCCTTGTCGCTCTTTCTCTAAACCAATGATAA--------TTAACTTTAAAGTCC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1913252 84 - 2029793 CACTGTGAGTTCTTGATTTAATTTAATCACTCAGTCTTCCTTGTTACTCTGTCTCTCAAGTGAGGATAA--------TTAACTTTAAAGTCC i proCoq1.NW_012150197v1 I 81 I 1463 s otoGar3.GL873542 22904207 66 + 22939663 CACTGTGATTTCTTGATTTAGCTGAA----TCAGTCTTCATTGTTATTTCCTCTCTC----------------------AACTTCGCAGTCC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181842980 66 + 182113224 CATGATGATTTCTTGGTTTATTCTAGTCACTC--TTTTCCTCAT--CTCCTT--------------TGA--------GTGTCATTAAAATTC i mm10.chr2 I 2 I 1 s canFam3.chr24 47654728 92 + 47698779 TACAGTGATTTTTTTGTTTAATACAATCACCCAGCCTGCCTTGTCACTCTTTCTGTAAACTAAGTTTAAAGTTCCCTGGAACTTAAAGGTCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 322232 79 - 397369 CTTGGTGATT-----GTGCCGATGAATCACTCGGCTATCCTTGTCACTACATCTCTAAACTGAGAATAA--------TTAACTTTAAAGTCC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56922823 1965 + 57149010 I a score=44912.000000 s hg38.chr20_KI270870v1_alt 169261 6 + 183433 TTTCGG s panTro5.chr20 66504679 6 + 66533130 TTTCGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171896 6 + 62195757 TTTCGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558335 6 - 578057 TTTCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079815 6 - 110113093 TTTTGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819652 6 - 92844088 TTTCGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485322 6 + 96509753 TTTCGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955263 6 - 16982598 GAACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757235 6 - 3785965 TTTCGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347064 6 - 90373283 TTTCGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147977 6 - 179258 TTTTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617374 6 - 5823884 TTTCGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102398 6 + 372756 TTCTGG i calJac3.chrUn_GL286459 C 0 I 6 s saiBol1.JH378156 16336186 6 + 16356641 TCCTGC i saiBol1.JH378156 C 0 I 1608 s cebCap1.NW_016107870v1 1210757 6 + 1231380 TTCTGG i cebCap1.NW_016107870v1 C 0 I 1115 s aotNan1.NW_018500483v1 2738146 6 + 11732439 TTCTGG i aotNan1.NW_018500483v1 C 0 I 6 s otoGar3.GL873542 22904273 6 + 22939663 TACAGG i otoGar3.GL873542 C 0 I 6 s mm10.chr2 181843047 4 + 182113224 --TTGG i mm10.chr2 I 1 I 7 s canFam3.chr24 47654820 6 + 47698779 TCCAGG i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 322311 6 - 397369 TTTAGG i dasNov3.JH569290 C 0 I 6 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e micMur3.chr18 56922823 1965 + 57149010 I a score=152398.000000 s hg38.chr20_KI270870v1_alt 169267 32 + 183433 AGTACTTCT-AAGCAGTTTTTGttttgttggt------------------------t s panTro5.chr20 66504685 30 + 66533130 AGTACTTCT-AAGCAGTttttgttttgttgg-------------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171902 30 + 62195757 AGTACTTCT-AAGCAGtttttgttttgttgg-------------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558341 30 - 578057 AGTACTTCT-AAGCAGTttttgttttgttgg-------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079821 30 - 110113093 AGTACTTCT-AAGCGGtttttgttttgttgg-------------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819658 28 - 92844088 AGTACTTCT-AAGCAGttttttttttttt---------------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485328 28 + 96509753 AGTACTTCT-AAGCAGttttttttttttt---------------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955269 30 - 16982598 AGTACATCA-AAACAATTTCTTTTCCTtttt-------------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757241 26 - 3785965 AGTACTTCT-AAGCAGGtttttttttt------------------------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347070 27 - 90373283 AGTACTTCT-AAGCGG-tttttttttttt---------------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 147983 19 - 179258 AGTACTTAT-AAGCAG---------tttt---------------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617380 24 - 5823884 AGTACTTCG-AAGCAG----ttttttttt---------------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102410 31 + 372756 AGTACTTCT-AAGCAGtttttgtcttgttggg------------------------- i calJac3.chrUn_GL286459 I 6 C 0 s saiBol1.JH378156 16337800 31 + 16356641 AGTACTTCT-AAGCAGTTTTTGTGTTGTTGGG------------------------- i saiBol1.JH378156 I 1608 C 0 s cebCap1.NW_016107870v1 1211878 33 + 1231380 AGTACTTCT-AAGCAGTTTTTGTCGTGTTGGG-----------------------tt i cebCap1.NW_016107870v1 I 1115 C 0 s aotNan1.NW_018500483v1 2738158 39 + 11732439 AGTACTTCT-AAGCAGTTTTTGTCTCGTTGGGtttt-----------------gttt i aotNan1.NW_018500483v1 I 6 C 0 s otoGar3.GL873542 22904285 57 + 22939663 AGTTCTTCCAAAACAGTTTTTGTTTGTTCTGCTGTTTTAATACTAAAAGAGTAGTAG i otoGar3.GL873542 I 6 C 0 s mm10.chr2 181843058 32 + 182113224 AGTTCTTTG-TAACAGTTTCTCTTTTGTTGTTT------------------------ i mm10.chr2 I 7 I 2 s dasNov3.JH569290 322323 25 - 397369 AGTTCTTCC-AAACAATTTTTAAATT------------------------------- i dasNov3.JH569290 I 6 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654826 6 + 47698779 I e micMur3.chr18 56922823 1965 + 57149010 I a score=88123.000000 s hg38.chr20_KI270870v1_alt 169299 25 + 183433 tttttttttt----tttttttttga----------------------------c--agt s panTro5.chr20 66504715 26 + 66533130 -ttatttttt----tttttttttga----------------------------cagagt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171932 22 + 62195757 -----ttttt----ttttttttgta----------------------------cagagt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558371 24 - 578057 ---ttttttt----tttttttttga----------------------------cagagt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079851 15 - 110113093 ----------------ctttcttga----------------------------cagagt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819686 17 - 92844088 --------------tttttttttga----------------------------cagaat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485356 17 + 96509753 --------------tttttttttga----------------------------cagaat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955299 28 - 16982598 ---tttttttgacatttttttttga----------------------------cagaat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757267 17 - 3785965 --------------tttttttttga----------------------------cagaat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347097 17 - 90373283 --------------tttttttttga----------------------------cagaat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148002 17 - 179258 --------------tttttttttga----------------------------cagaat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617404 17 - 5823884 --------------tttttttttga----------------------------cagaat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102441 23 + 372756 ----ttttgt----ttttgttttga----------------------------cagagt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16337831 17 + 16356641 --------------ttttgttttga----------------------------ctgagt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1211911 27 + 1231380 ctgtttttgt----ttttgttttga----------------------------ctgagt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738197 27 + 11732439 ttgtttttgt----ttttgttttga----------------------------cagagt i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22904342 55 + 22939663 CTACAAATTG----TTTATTTTTAAATAAATGTCATGGGTTGAAGGGATTTCCCAAGGT i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 322348 25 - 397369 --TTTTTAAt----ttttaattttt----------------------------taaggt i dasNov3.JH569290 C 0 I 120 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654826 6 + 47698779 I e mm10.chr2 181843090 2 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I a score=188795.000000 s hg38.chr20_KI270870v1_alt 169324 19 + 183433 tgtgccccatcgtctaggc s panTro5.chr20 66504741 19 + 66533130 cgtgccccatcgcctaggc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171954 19 + 62195757 cgtgccccatcgtctaggc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558395 19 - 578057 cgtgccccatcgtctaggc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079866 19 - 110113093 cgtgctccatcgcctaggc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819703 19 - 92844088 catgctccatcgcctaggc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485373 19 + 96509753 catgctccatcgcctaggc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955327 19 - 16982598 catgctccatcgcctaggc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757284 19 - 3785965 catgctccatcgcctaggc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347114 19 - 90373283 catgctccatcgcctaggc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148019 19 - 179258 cgtgctccatcgcctaggc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617421 19 - 5823884 cgtgctccatcgcctaggc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102464 19 + 372756 cttgctgcatggcctaggc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16337848 19 + 16356641 cttgctccatggcctaggc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1211938 19 + 1231380 cttgctctatggtctaggc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738224 19 + 11732439 cttgctccatggctgaggc i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22904397 19 + 22939663 CTTGCTCTGTTGTCTAGGC i otoGar3.GL873542 C 0 I 495 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654826 6 + 47698779 I e mm10.chr2 181843090 2 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e dasNov3.JH569290 322373 120 - 397369 I a score=1470234.000000 s hg38.chr20_KI270870v1_alt 169343 169 + 183433 tggagtgccgtgacacgagcaaggcccactgtagccttgacctcctgggatccagcaaatcctcct-------------gagtacctagggccacaggcacgcaccaccacccctggctgatgtttaaatg-----------------------------------------------------------------------------------------------atttttagagac-ggggtctcgccatgtttcccaggctggtctcaaactcct s panTro5.chr20 66504760 169 + 66533130 tggagtgccgtgacaccagcaaggcccgctgtagccttgacctcccgggatccagcaactcctcct-------------gagtacccagggccacaggcacgcaccaccacccctggctgatgtttaaatg-----------------------------------------------------------------------------------------------atttttagagac-ggggtctcgccatgtttcccaggctggtctcaaactcct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62171973 169 + 62195757 tggagtgccgtgacaccagcaaggcccgctgtagccttgacctcccgggatccagcaactcctcct-------------gagtacctagggccacaggcacgcaccaccacccctggctgatgtttaaatg-----------------------------------------------------------------------------------------------atttttagagat-ggggtctcgccatgtttcccaggctggtctcaaactcct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558414 169 - 578057 tggagtgccgtgacacgagcaaggcccactgtagccttgacctcctgggctccagcaaatcctcct-------------gagtacctagggccacaggcacgcaccaccacccctggctgatgtttaaatg-----------------------------------------------------------------------------------------------atttttagagac-ggggtctcgccatgtttcccaggctggtctcaaactcct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110079885 168 - 110113093 tggagtgccatgacacgaaccaggcccactgcagccttgacttcctgggctctagcaa-tcctcct-------------gaggacctagggccacaggcatgcaccagcacgcttggctaatttttaaatt-----------------------------------------------------------------------------------------------atatttagagac-ggggtctcttcatgtttcccaggctggtctcaaactcct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819722 224 - 92844088 tggagtgctgtgacacaaacacggcccactacagccttgacctcctgggctctagcag-tcttcct-------------gagtacctggggccacaggcgtgcaccaccacacctggctaatttttaaaac--tttttgtgga------------------gat------ggggtcttggcg-------------tgcaccaccatgcctggctaatttttaaattttttttagagac-ggggtctcgccgtgtttcccaggctggtctcaaactcct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485392 225 + 96509753 tggagtgccgtgacacaaacacggcccactacagccttgacctcctgggctctagcag-tcttcct-------------gagtacctggggccacaggcgtgcaccaccacacctggctaatttttaaaac-ttttttgtggaga-------------tggggt-----------cttggcg-------------tgcaccaccatgcctggctaatttttaaattttttttagagac-ggggtcttgccgtgtttcccaggctggtctcaaactcct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955346 225 - 16982598 tggagtgccgtgacacaaacacggcccactacagccttgacctcctgggctctagcag-tcttcct-------------gagtacctggggccacaggcgtgcaccaccacacctggctaatttttaaaac-ttttttgtggaga-------------tggggt-----------cttggcg-------------tgcaccaccatgcctggctaatttttaaattttttttagagac-ggggtctcgccgtgtttcccaggctggtctcaaactcct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757303 227 - 3785965 tggagtgccgtgacacaaacacggcccactacagccttgacctcctgggctctagcag-tcttcct-------------gagtacctggggccacagccgtgcaccaccacacctggctaatttttaaaactttttttgtggaga-------------tggggtcttggcgtgc------------------------accaccatgcctggctaatttttaaattttttttagagatgggggtctcgccgtgtttcccaggctggtctcaaactcct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347133 225 - 90373283 tggagtgccgtgacacaaacacagcccactgcagccttgacctcctgggctctagcag-tcttcct-------------gagtacttggggccacaggcgtgcaccaccacacctggctaatttgtaaaac-ttttttgtggagatggggtcttggcgtgc-------------------------------------accaccatgcccggctaatttttaaattttttttagagac-agggtctcgccgtgtttcccaggctggtctcaaactcct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148038 225 - 179258 tggagtgccgtgacacaaacacggcccactacagccttgacttcctgggctctagcag-tcttcct-------------gagtacctggggccatagccgtgcaccaccacacctggctaatttttaaaac-ttttttgtggagatggggtcttggcgtgc-------------------------------------accaccatgcctggctaatttttaaattttttttagagac-agggtctcgccgtgtttcccaggctggtctcaaactcct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617440 225 - 5823884 tggagtgccgtgacacaaacacggcccactgcagccttgacctcctgggctctagcag-tcctcct-------------gagtacctggggccacaggcgtgcaccaccacacctggctaatttttaaaac-ttttttgtggag-------------------------------------atggggtcttggcgtgcaccaccacgcctggctaatttttgagttttttttagaggc-ggggtctcgccgtgtttcccaggctggtctcaaactcct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102483 168 + 372756 tggaatgccgtgacgtgaacaaggcttactgcagccttgacctcctgggctctagcaa-tcctcct-------------gagtacctagggccacaagcacacaccaccatgcttggctaatttttaaatt-----------------------------------------------------------------------------------------------gtttttagagac-ggggtctcgccatgtttcccaggctggtctcaaactcct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16337867 166 + 16356641 tggaatgctgtgacgtgaacaaggctcactgcagccttga---cctgggctctagcaa-tcctcct-------------gagtacctagggccacaggcacacaccaccatgcttggctaatttttaaatt-----------------------------------------------------------------------------------------------gtttgcagagatgggggtctcaccacgtttcccaggctggtctcaaactcca i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1211957 168 + 1231380 tggattgccgtgatgtgagcaaggcttactgcagccttgacctcctgggctctagcaa-tcctcct-------------gagtacctagggccacaggcacacaccatcatgcttggctaatttttaaatt-----------------------------------------------------------------------------------------------gtgtttagagac-ggggtctcgccatgtttcccaggctggcctcaaactcct i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738243 168 + 11732439 tgggatgccgtgacgtgaacgaggctcgctgcagccttgccctcctgggctctagcaa-tcctcct-------------gagtacgcagggccacaggcacacaccaccgtgcttggctaatttttaaatt-----------------------------------------------------------------------------------------------gtctttagagac-agggtctcgccatgtttcccaggctggtctcaaactcct i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22904911 165 + 22939663 tagagtctcgtggtat---catagctcacagcaacctcaaactc--gggctcaagtga-tcctcctgcctcagcctcccgagtagctgggactataggtgcccactactatgcccggctag---------a-----------------------------------------------------------------------------------------------ttttttagagat-ggggtcttgc--tcttgatcaggctgatctcaaactcct i otoGar3.GL873542 I 495 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654826 6 + 47698779 I e mm10.chr2 181843090 2 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e dasNov3.JH569290 322373 120 - 397369 I a score=825932.000000 s hg38.chr20_KI270870v1_alt 169512 72 + 183433 gggcgcc---agctctccacctgcctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatgcctggcc s panTro5.chr20 66504929 72 + 66533130 gggcgcc---agctctccacctgcctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatgcctggcc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172142 72 + 62195757 gggcgcc---agctctccacctacctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatgcctggcc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558583 72 - 578057 gggcgcc---agctctccacctgcctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatgcctggcc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080053 72 - 110113093 gggcgcc---agctctccacctgcctcagcctcccaaagcgctggga--------ttacaggcatgagctgccatgcctggcc i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92819946 72 - 92844088 gggcgcc---agctctccaccttcctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatgcctggcc i rheMac8.chr10 C 0 I 14 s macFas5.chr10 96485617 72 + 96509753 gggcgcc---agctctccaccttcctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatgcctggcc i macFas5.chr10 C 0 I 12 s macNem1.NW_012014244v1 16955571 72 - 16982598 gggcgcc---agctctccaccttcctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatgcctggcc i macNem1.NW_012014244v1 C 0 I 14 s cerAty1.NW_012001373v1 3757530 72 - 3785965 gggcgcc---agctctccaccttcctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatgcctggcc i cerAty1.NW_012001373v1 C 0 I 14 s chlSab2.chr2 90347358 72 - 90373283 gggcgcc---agctctccaccttcctcagcctcccaaagtgctagga--------ttacaggcatgagccaccatgcctggcc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148263 72 - 179258 gggcgcc---agctctccaccttcctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatgcctggcc i manLeu1.NW_012101652v1 C 0 I 14 s colAng1.NW_012114444v1 5617665 72 - 5823884 gggcgcc---agctctccaccttcctcagcctcccaaagtgctggga--------ttacaggcatgagccaccatacctggcc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102651 72 + 372756 gggtgca---agctgtccacctgcctcagcctcccaaagtgctggga--------ttacaggcatgaaccatcatgcctggcc i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338033 72 + 16356641 gggtgca---agctgtccacctgcctcagcctcccaaagtgctggga--------ttacaggcatgaaccatcatgcctggcc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1212125 72 + 1231380 gggtgca---agctgtccacctgcctcagcctcccaaagtgctggga--------ttacaggcatgaaccatcatgcatggcc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738411 72 + 11732439 gggtgca---agctgtccacctgcctcagcctcccaaaatgccggga--------ttacaggcatgaaccatcatgcctggtc i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22905076 75 + 22939663 gagctcctggagcagtccaactgccttagcctcccagagtgcaggga--------ttacaggtgtgagccactgtgccctgcc i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 322493 74 - 397369 aggcacc---aggactcaaac--ctgggacctccca---tgttggaagcagggacttaactgcttaagtca-catgtgctacc i dasNov3.JH569290 I 120 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654826 6 + 47698779 I e mm10.chr2 181843090 2 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I a score=59609.000000 s hg38.chr20_KI270870v1_alt 169584 16 + 183433 ------TACTTTTTTGTTTTAA s panTro5.chr20 66505001 16 + 66533130 ------TACTTTTTTGTTTTAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172214 16 + 62195757 ------TACTTTTTTGTTTTAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558655 16 - 578057 ------TACTTTTTTGTTTTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080125 16 - 110113093 ------TACTTTTTTGTTTTAA i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90347430 16 - 90373283 ------TGCTTTTTTGTTTTAA i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5617737 16 - 5823884 ------TGCTTTTTTGTTTTAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102723 16 + 372756 ------TGCTTTGTTGTTTTAA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338105 16 + 16356641 ------TGCTTTATTGTTTTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1212197 16 + 1231380 ------TGCTTTGTTGTTTTAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738483 16 + 11732439 ------TGCTTTGTTGTTTTAA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22905151 13 + 22939663 ---------CAGTTATTTTTAA i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 322567 21 - 397369 TCCAAACAGTTTTTGTTGTTG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654826 6 + 47698779 I e cerAty1.NW_012001373v1 3757602 14 - 3785965 I e mm10.chr2 181843090 2 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e manLeu1.NW_012101652v1 148335 14 - 179258 I e macNem1.NW_012014244v1 16955643 14 - 16982598 I e rheMac8.chr10 92820018 14 - 92844088 I e macFas5.chr10 96485689 12 + 96509753 I a score=121300.000000 s hg38.chr20_KI270870v1_alt 169600 27 + 183433 TACT-----------AAGAGTAATACCTGTAGATTTTA------- s panTro5.chr20 66505017 27 + 66533130 TACT-----------AAGAGTAATACCTGTAGATTTTA------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172230 27 + 62195757 TACT-----------AAGAGTAATACCTGTAGATTTTA------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558671 27 - 578057 TACT-----------AAGAGTAATACCTGTAGATGTTA------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080141 27 - 110113093 TACT-----------AAGAGTAATACCTGTAGATTTTA------- i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90347446 27 - 90373283 TATT-----------AAGAGTAATATCTGTAGATTTTA------- i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5617753 27 - 5823884 TATT-----------AAGAGTAATATCTATAGATTTTA------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102739 27 + 372756 TAGT-----------AACAGTAATACCTGTAGATTTTA------- i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338121 27 + 16356641 TAGT-----------AAGAGTAATACCTGTAGATTTTA------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1212213 27 + 1231380 TAGT-----------AAGAGTAATACCTGTAGATTTTA------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738499 27 + 11732439 CAGT-----------AAGAGTAATACCTGTAGATTTTA------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22905164 14 + 22939663 TATT-----------AATAACAATA-------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181843092 24 + 182113224 TACT-----------AAGAG-AGTAGTTGT--ATTTTT------- i mm10.chr2 I 2 C 0 s dasNov3.JH569290 322588 45 - 397369 TATTTTAAATAATGAAAGATTAATACCTTTAAGTTATTTATTTTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654826 6 + 47698779 I e cerAty1.NW_012001373v1 3757602 14 - 3785965 I e micMur3.chr18 56922823 1965 + 57149010 I e manLeu1.NW_012101652v1 148335 14 - 179258 I e macNem1.NW_012014244v1 16955643 14 - 16982598 I e rheMac8.chr10 92820018 14 - 92844088 I e macFas5.chr10 96485689 12 + 96509753 I a score=516393.000000 s hg38.chr20_KI270870v1_alt 169627 101 + 183433 AAATTAGTTTCAGGGATGGAAGGGATTTCAC------------TATGAAGCTATTTAGCCTATTTT-CCAAACAAATGAGTTGTGAGA-----CTGCACATGGAAATA-TGGCTATTTTT s panTro5.chr20 66505044 100 + 66533130 AAATTAGTTTCAGGGAT-GAAGGGATTTCAC------------TATGAAGCTATTTAGCCTATTTT-CCAAACAAATGAGTTGTGAGA-----CTGCACATGGAAATA-TGGCTATTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172257 100 + 62195757 AAATTAGTTTCAGGGAT-GAAGGGATTTCAC------------TATGAAGCTATTTAGCCTATTTT-CCAAACAAATGAGTTGTGAGA-----CTGCACATGGAAATA-TGGCTATTTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558698 101 - 578057 AAATTAGTTTCAGGGATGGAAGGGATTTCAC------------TATGAAGCTATTTAGCCTATTTT-CCAAACAAATGAGTTGTGAGA-----CTGCACATGGAAATA-TGGCTATTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080168 113 - 110113093 AAATTAGTTTCAGGGATGGAAGGGATTTCACAGG-TTATCTTATTTGAAGCTATTTATCCTATTTTCCCAAACAAGTGAGTTGTGAGA-----CTGCACATGGGAATA-TGGCTATTTTT i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90347473 113 - 90373283 AAATTAGTTTCAGGGATGGAAGGGAGTTCACAGG-TTATCTTATTTGAAGCTATTTAGTCTATTTTCCCAAACAAATGAGTTGTGAGA-----CTGCACATGGGAATA-TGGCTGTTTTT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5617780 113 - 5823884 AAATTAGTTTCAGGGATGGAAGGGATTTCACAGG-TTATCTTATTTGAAGCTATGTAGTGTATTTTCCCAAACAAATGAGTTGTGAGA-----CTGCACATGGGAATA-TGGCTGTTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102766 118 + 372756 AAATTAATTTCAGAGATGGAAGGGATTTCACAGG-TTATATTATTTGAAGCAATTTAGCCTATTTTCCCAAACAAATGAGTTGTGAGGGAATTCTGCACATGGGAATA-TGGCTATTTTT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338148 118 + 16356641 AAATTAATTTCAGAGACAGAAGGGATTTCACAGG-TTATATTATTTGAAGCTATTTAGCCTATTTTCCCAAACAAATGAGTTGTGAGGGAATTCTGCACATGGGAATA-TGGCTATTTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1212240 119 + 1231380 AAATTAATTTCAGAGATGGAAGGGATTTCATAGG-TTATATGATTTGAAGCTATTTAGCCTATTTTCCCAAACAAATGAGTTGTGAGGGAATTCTGCACATGGGAATATTGGCTATTTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738526 118 + 11732439 AAATTAATTTCAGAGATGGAAGGGATTTCACAGG-TTATATTATTTGAAGCTATTTAGCCTATTTTCCCAAACAAATGAGTTGTGAGGGAATTCTGCACATGGGAATA-TGGCTGTTTTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22905178 20 + 22939663 ----------------------------------------------GGAGCAGT----CCTACTTT----------------GTGA---------------------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181843116 95 + 182113224 AAGGAATTTTCAGAGATGGAAGGGATTTATTAGG-TTATGATATTTGGAGCCATTTAGGCTATTTT-CCTTACAGATG----------------------TATGAATA-TAGCCGTTTCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47654832 90 + 47698779 AAATAAATTCCAGGGATGGAAAGAATTTCACAGT-------------------TTTTGCCTCTTTT-CC---CAAATAAGTTGTAAGG-----CTGCACATGGGAAT--TGGCttttttt i canFam3.chr24 I 6 I 35 s dasNov3.JH569290 322633 114 - 397369 AAATAAATTTCAGGAATGGAAGGGATTTCAAAAGATTATCTTATTTGAAGCCATTTAGCCTATTCTACCAAAAAATTAGGTTGCGAGA-----ATATACAGGGGAATA-TAGTCATTTTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e cerAty1.NW_012001373v1 3757602 14 - 3785965 I e micMur3.chr18 56922823 1965 + 57149010 I e manLeu1.NW_012101652v1 148335 14 - 179258 I e macNem1.NW_012014244v1 16955643 14 - 16982598 I e rheMac8.chr10 92820018 14 - 92844088 I e macFas5.chr10 96485689 12 + 96509753 I a score=29214.000000 s hg38.chr20_KI270870v1_alt 169728 6 + 183433 ---AATAAT s panTro5.chr20 66505144 6 + 66533130 ---AATAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172357 6 + 62195757 ---AATAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558799 6 - 578057 ---AATAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080281 6 - 110113093 ---AATAAT i nomLeu3.chr13 C 0 C 0 s chlSab2.chr2 90347586 6 - 90373283 ---AATAAT i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5617893 6 - 5823884 ---AATAAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102884 6 + 372756 ---AACAAT i calJac3.chrUn_GL286459 C 0 I 6 s saiBol1.JH378156 16338266 6 + 16356641 ---AACAAT i saiBol1.JH378156 C 0 I 6 s cebCap1.NW_016107870v1 1212359 6 + 1231380 ---AACAAT i cebCap1.NW_016107870v1 C 0 I 6 s aotNan1.NW_018500483v1 2738644 6 + 11732439 ---AACAAG i aotNan1.NW_018500483v1 C 0 I 3 s mm10.chr2 181843211 6 + 182113224 ---GATGAT i mm10.chr2 C 0 I 155 s dasNov3.JH569290 322747 9 - 397369 AAGATTAAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654922 35 + 47698779 I e cerAty1.NW_012001373v1 3757602 14 - 3785965 I e micMur3.chr18 56922823 1965 + 57149010 I e manLeu1.NW_012101652v1 148335 14 - 179258 I e macNem1.NW_012014244v1 16955643 14 - 16982598 I e rheMac8.chr10 92820018 14 - 92844088 I e otoGar3.GL873542 22905198 0 + 22939663 C e macFas5.chr10 96485689 12 + 96509753 I a score=3926.000000 s hg38.chr20_KI270870v1_alt 169734 2 + 183433 AG s panTro5.chr20 66505150 2 + 66533130 AG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172363 2 + 62195757 AG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558805 2 - 578057 AG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080287 2 - 110113093 AG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96485701 2 + 96509753 AA i macFas5.chr10 I 12 C 0 s chlSab2.chr2 90347592 2 - 90373283 AA i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5617899 2 - 5823884 AA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102896 2 + 372756 AC i calJac3.chrUn_GL286459 I 6 C 0 s saiBol1.JH378156 16338278 2 + 16356641 AC i saiBol1.JH378156 I 6 C 0 s cebCap1.NW_016107870v1 1212371 2 + 1231380 AT i cebCap1.NW_016107870v1 I 6 C 0 s aotNan1.NW_018500483v1 2738653 2 + 11732439 AC i aotNan1.NW_018500483v1 I 3 C 0 s dasNov3.JH569290 322756 2 - 397369 AA i dasNov3.JH569290 C 0 I 5 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654922 35 + 47698779 I e cerAty1.NW_012001373v1 3757602 14 - 3785965 I e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e manLeu1.NW_012101652v1 148335 14 - 179258 I e macNem1.NW_012014244v1 16955643 14 - 16982598 I e rheMac8.chr10 92820018 14 - 92844088 I e otoGar3.GL873542 22905198 0 + 22939663 C a score=111386.000000 s hg38.chr20_KI270870v1_alt 169736 11 + 183433 CAGATAACTAA s panTro5.chr20 66505152 11 + 66533130 CAGATAACTAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172365 11 + 62195757 CAGATAACTAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558807 11 - 578057 CAGATAACTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080289 11 - 110113093 CAGATAACTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820032 11 - 92844088 CAGATAACTAA i rheMac8.chr10 I 14 C 0 s macFas5.chr10 96485703 11 + 96509753 CAGATAACTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955657 11 - 16982598 CAGATAACTAA i macNem1.NW_012014244v1 I 14 C 0 s cerAty1.NW_012001373v1 3757616 11 - 3785965 CAGATAACTAA i cerAty1.NW_012001373v1 I 14 C 0 s chlSab2.chr2 90347594 11 - 90373283 CAGATAACTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148349 11 - 179258 CAGATAAGTAA i manLeu1.NW_012101652v1 I 14 C 0 s colAng1.NW_012114444v1 5617901 11 - 5823884 CAGATAACTAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102898 11 + 372756 CAAACAACTGA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338280 11 + 16356641 CAAACAACTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1212373 11 + 1231380 CAAACAACTGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738655 11 + 11732439 CAAACAACTGA i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 322763 11 - 397369 CAGGTAACAAA i dasNov3.JH569290 I 5 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654922 35 + 47698779 I e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e otoGar3.GL873542 22905198 0 + 22939663 C a score=182444.000000 s hg38.chr20_KI270870v1_alt 169747 26 + 183433 GGA------AAAACATCACTTGGTGCCAAA----TG s panTro5.chr20 66505163 26 + 66533130 GGA------AAAACATCACTTGGTGCAAAA----TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172376 26 + 62195757 GGA------AAAACATCACTTGGTGCAAAA----TG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558818 26 - 578057 GGA------AAAACATCACTTGGTGCAAAA----TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080300 26 - 110113093 GGA------AAAACATCACTTGGTGCAAAA----TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820043 26 - 92844088 GGA------AAAACATCACTTGGTGCAAAA----TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485714 26 + 96509753 GGA------AAAACATCACTTGGTGCAAAA----TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955668 26 - 16982598 GGA------AAAACATCACTTGGTGCAAAA----TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757627 26 - 3785965 GGA------GAAACATCACTTGGTGCAAAA----TG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347605 26 - 90373283 GGA------AAAACATCACTTGGTGCAAAA----TG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148360 26 - 179258 GGA------GAAACATCACTTGGTGCAAAA----TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617912 26 - 5823884 GGA------AAAACATCACTTGGTGCAAAA----TG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102909 24 + 372756 GGA------AAAATGTCACTTGGTGCAAAA------ i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338291 24 + 16356641 GGA------AGAATGTCACTTGGTGCAAAA------ i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1212384 26 + 1231380 GGA------AAAATGTCACTTGGTGCAAAATG---- i cebCap1.NW_016107870v1 C 0 I 9 s aotNan1.NW_018500483v1 2738666 26 + 11732439 GGA------AAAATGTCACTTGGGGCAAAA--TG-- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22905198 5 + 22939663 ----------AAATG--------------------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47654957 19 + 47698779 GAA------ACAACAGTACCAGACA----------- i canFam3.chr24 I 35 C 0 s dasNov3.JH569290 322774 32 - 397369 AGATTTATTGAATTCCTCCTTTGTGTTAAG----TG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I a score=23324.000000 s hg38.chr20_KI270870v1_alt 169773 11 + 183433 CTGT-GAGGGGC s panTro5.chr20 66505189 11 + 66533130 CTGT-GAGGGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172402 11 + 62195757 CTGT-GAGGGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558844 11 - 578057 CTGC-GAGGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080326 11 - 110113093 CTGT-GGGGGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820069 12 - 92844088 CTACGGGGGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485740 12 + 96509753 CTACGGGGGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955694 12 - 16982598 CTACGGGGGGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757653 12 - 3785965 CTACGGGGGGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347631 12 - 90373283 CTACGGGGGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148386 12 - 179258 CTACGGGGGGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617938 11 - 5823884 CTAC-GGGGGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102933 6 + 372756 ------TGGAAC i calJac3.chrUn_GL286459 C 0 I 4 s saiBol1.JH378156 16338315 6 + 16356641 ------TGGAAC i saiBol1.JH378156 C 0 I 4 s aotNan1.NW_018500483v1 2738692 4 + 11732439 --------GAAC i aotNan1.NW_018500483v1 C 0 I 5 s otoGar3.GL873542 22905203 10 + 22939663 CTACATTGGG-- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47654976 10 + 47698779 --ATTGAGGGTT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 322806 11 - 397369 CCATAGAAGGG- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e cebCap1.NW_016107870v1 1212410 9 + 1231380 I a score=44861.000000 s hg38.chr20_KI270870v1_alt 169784 5 + 183433 GGGGA----- s panTro5.chr20 66505200 5 + 66533130 GGGGA----- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172413 5 + 62195757 GGGGA----- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558855 5 - 578057 GGGGA----- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080337 5 - 110113093 AGGGA----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820081 5 - 92844088 GGGGa----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485752 5 + 96509753 GGGGA----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955706 5 - 16982598 GGGGa----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757665 5 - 3785965 GGGGa----- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347643 5 - 90373283 GGGGa----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148398 5 - 179258 GGGGa----- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617949 5 - 5823884 GGGGa----- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 102943 5 + 372756 GGGGA----- i calJac3.chrUn_GL286459 I 4 I 2239 s saiBol1.JH378156 16338325 5 + 16356641 GGGGA----- i saiBol1.JH378156 I 4 I 1 s cebCap1.NW_016107870v1 1212419 5 + 1231380 GGGAA----- i cebCap1.NW_016107870v1 I 9 C 0 s aotNan1.NW_018500483v1 2738701 5 + 11732439 GGGAA----- i aotNan1.NW_018500483v1 I 5 C 0 s otoGar3.GL873542 22905213 4 + 22939663 GGAG------ i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 322817 9 - 397369 -GGAACACGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47654986 1 + 47698779 I e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I a score=2715182.000000 s hg38.chr20_KI270870v1_alt 169789 250 + 183433 AGGCATCTGTTTTTAA-CTCAGTA-GGGTGGAAAAGTTTTGCCGGAGGGGTGATAGGAGCTGATCTG----------------------TAAACAGGAAGCAGGGGCCAGGCTGCTgaggc-----------------------aaagctggctgagaagacgctg--------gatgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgacaggatttacgggtggactgtatatgcttgtgaaaga----aaCGTCAGGAAT-------Gtggcttggcttg------gt---ggttcatg----- s panTro5.chr20 66505205 268 + 66533130 AGGCATCTGTTTTTAA-CTCAGTA-AGGTGGAAAGGTTTTGCCGGAGGGGTGATAGGAGCTGATCTGTAC----TGTAAAACCTTACTCTAAACAGGAAGCAGGGGccaggctgctgaggc-----------------------aaagctggctgagaagacgctg--------gatgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgacaggatttatgggtggactgtatatggttgtgaaaga----aacatcaggaat-------gtggcttggcttg------gt---ggttcatg----- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172418 268 + 62195757 AGGCATCTGTTTTTAA-CTCAGTA-AGGTGGAAAGGTTTTGCCGGAGGGGTGATAGGAGCTGATCTGTAC----TGTAAAACCTTACTCTAAACAGGAAGCAGGGGccaggctgctgaggc-----------------------aaagctggctgagaagacgctg--------gatgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgacaggatttatgggtggactgtatatggttgtgaaaga----aacatcaggaat-------gtggcttggcttg------gt---ggttcatg----- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 558860 267 - 578057 AGGCATCTGTTTTTAA-CTCAGTA-AGGTGGAAAGGTTTTGTCGGAGGGGTGATAGGAGCTGATGTGTAC----TGTAAAACCTTACTCTAAACAGGAAGCAGGGGCCAGGCTGCTGAGGC------------------------AAGCTGGCTGAGAAGACACTG--------GAtgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgacaggatttatggatggactgtatatggttgtgaaaga----aacatcaggaat-------gtggcttggcttg------gt---ggttcatg----- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080342 267 - 110113093 AGGCATCTGTTTTTAA-CTCAGTA-AGGTGGAAAGGTTTTGCTGGAGGGGTGATAGGAGCTGATCTGTAC----CGTAAAACCTTGCTCTAAGCAGGAAGCAGGGGCGCGGCTGCTGAGGC------------------------AAGCTGGCTGAGAAGACACGG--------GAtgaaaccagtgcagagaagctggagtctgtattttctctaaatcctgttagaactgacaggatttacggatgggctgcatgtggttgtgaaaga----aaCATCAGGAAT-------GTGGCTTGAGTtg------gt---ggttcgtt----- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820086 263 - 92844088 aggcatctgtttttaa-ctcagta-aggtggaagggttttgccagaggagtggtaggagctgatctctac----tgtaaaaCCTTGCTCTAAACAGGAAGCA-GGGCCAGGCTGCTGAGGC------------------------atgctggct---aagacactg--------gatgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgacaggatttacggatggactgtatatggttgtgaaaga----aacatcaagaat-------gtggcttgacttg------gt---ggttcatg----- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96485757 263 + 96509753 AGGCATCTGTTTTTAA-CTCAGTA-AGGTGGAAGGGTTTTGCCAGAGGAGTGGTAGGAGCTGATCTCTAC----TGTAAAACCTTGCTCTAAACAGGAAGCA-GGGCCAGGCTGCTGAGGC------------------------atgctggct---aagacactg--------gatgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgacaggatttacggatggactgtatatggttgtgaaaga----aacatcaagaat-------gtggcttgacttg------gt---ggttcatg----- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955711 263 - 16982598 aggcatctgtttttaa-ctcagta-aggtagaagggttttgccagaggagtggtaggagctgatctctac----tgtaaaaCCTTGCTCTAAACAGGAAGCA-GGGCCAGGCTGCTGAGGC------------------------atgctggct---aagacactg--------gatgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgacaggatttacggatggactgtatatggttgtgaaaga----aacatcaagaat-------gtggcttgacttg------gt---ggttcatg----- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757670 263 - 3785965 aggcatctgtttttaa-ctcagta-aggtggaagggttttgccagaggagtggtaggagctgatctctac----tgtaaaaCCTTGCTCTAAACAGGAAGCA-GGGCCAGGCTGCTGAGGC------------------------atgctggct---aagacactg--------gatgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgataggatttacggatggactgtatatggttgtgaaaga----aaCATCAAGAGT-------GTGGCTTGACTTg------gt---ggttcatg----- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347648 263 - 90373283 aggcatctgtttttaa-ctcagta-aggtggaagggttttgccagaggagtggtaggagctgatctctac----tgtaaaaCCTTGCTCTAAACAGGAAGCA-GGGCCAGGCTGCTGAGGC------------------------atgctggct---aagacactg--------gatgaaaccagtgcagagaaactggagtctgtattttttctaaatcctgttagaactgacaggatttaaggatggactgtatatggttgtgaaaga----aacatcaagaat-------gtggcttgacttg------gt---ggttcatg----- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148403 263 - 179258 aggcatctgtttttaa-ctcagta-aggtggaagggttttgccagaggagtggtaggagctgatctctac----tgtaaaaCCTTGCTCTAAACAGGAAGCA-GGGCCAGGCTGCTGAGGC------------------------atgctggct---aagacactg--------gatgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgacaggatttacggatggactgtatatggttgtgaaaga----aacatcaagaat-------gTGGCTTGACTTg------gt---ggttcatg----- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5617954 264 - 5823884 aggcatctgtttttaa-ctcagta-aggtggaagggttttgccagaggagtggtaggagctgatctgtac----tgtaaaaccttgctctaaacaggaagcaggggccaggctgctgaggc------------------------atgctggct---aagacactg--------gatgaaaccagtgcagagaagctggagtctgtattttttctaaatcctgttagaactgacaggatttacggatggactgcatatggttgtgaaaga----aacatcaagaat-------gtggcttgacttg------gt---ggttcatg----- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 105187 253 + 372756 AGGCATCCCTTTTTAA-CTCAGTA-AGGtggaatggttttgccagaggagtgataggagctgatctatgc----tgtacaaCCTTGCTCTAAAGAGGAAGCAGGGGTCAAGCTGCTGTGGC------------------------AAGCTGGGTGA-GAGA---------------------CAGTGCAGAGAAGCTGGAGTCTATATTGTTTCCAAATCCTGTTAGAATTGACAGGATTTATGGATGGACTGTATATGGTTGTGAAGGA----AACATCAAGAAC-------GTGgctgggcttg------gt---ggctcatg----- i calJac3.chrUn_GL286459 I 2239 C 0 s saiBol1.JH378156 16338331 266 + 16356641 AGGCATCCATTTTTAA-CTCAGTA-AGGTGGAATGGTTTTGCCAGAGGAGTGATAGGAGCTGGTTTATTC----TGTAAAACCTTGCTCTAAAGAGAAAGCAGGGGCTAAGCTGCTGTGGC------------------------GAGCTGGGTGA-GAGATACTG--------GATGAAACCAATACAGAGAAGCTGGAGTCTATATTGTTTCCAAATCCTGTTAGAACTGACAGGATTTATGGATGGACTATATATGGTTGTGAAGGA----AACATCAAGAAT-------GTGgctgggcttg------gt---ggtttatg----- i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1212424 266 + 1231380 AGGCATCCGTTTTTAA-CTCAGTA-AGATGGAATGGTTTTGCCAGAGCAGTGATAGGAGCCGATTTATAC----TGTACAACCTTGCTCTAAAGAGGAAGCAGGGGCCAGGCTGCTGTGGC------------------------AAGCTGGGTAA-GAGATACTG--------GATGAAACCAGTGCAGAGAAGCTGGAGTCTATATTGTTTTCAAATCCTGTTAGAACTGCCAGGATTTATGGATGGACTATATATGGTTGTGAAGGa----aacatcaagaat-------gtggctgggcttg------gt---ggttcatg----- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738706 265 + 11732439 AGGCATCCATTTTTAA-CTCAGTA-AGGTGGAATGGTTTTGCCAGAGGGGTGATAGGAGCTGATCCATAC----TGTACAACCTTGCTgtaaagaggaagcaggggccaagctgctgcggc------------------------aagctgggtga-gagacactg--------gatg-aaccagtgcagtgaagctggagtctatgttgtttctaaatcctggtagaactgacaggatttatggatggactgtatatggTTATGAAGGa----aacttcaagaat-------gtggctgtcctta------gt---ggttcatg----- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22905217 229 + 22939663 AGATATCTGTTTTTAGTCTGAGTG-AGGTGGAATAGTTTTACTAGAGGAGCAAGAGGAGCTGACGTACAC----TGTAAAAGATTGTTCTGAAGAGGAAGCA-AGGCCAGACTGCCATGGC------------------------AAGGTGTGTGA-GAGGCACTG--------GATGAAGCTGGTGTGGGG-------------------------------------------GGGTATGGTGATGGGCTGGCTGTGGTTGTGAAAGA----AACATCAAGAAT-------GTCTCTAGGCTGgggtacagt---ggctcaag----- i otoGar3.GL873542 C 0 I 133 s canFam3.chr24 47654987 166 + 47698779 AGGTGTCTGCTTTTAG----AGTAGAGGTAgaacggttttgccagaggagtaacaggggctcacctgtgc----tttaaaagatttctctCAAGAGGAAGCAGGGCTGGGACTGCTGCAGC-----------------------------------------------------------ATCTGTG-AGAGAGGGTGGCATCCA-------------------------------------------GACCGCAGGTGCAGGTGCTAGA------------------------TGTCCTG----------------------------- i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 322826 298 - 397369 ----------TGTCAT-C----TG-AGAtggaat-gttttgacagaggtgtggtaggggatggtctgtgctttatttaaaagatcactccaaagaggaagcaggaagcaggcagtggaggctgtgtacagtcctgataaaagtcagtaatggct---cggacaagggtggcagtgatgaagctggtgcagaggagttggattctgtattttttg------atgctggaactaacaagatttgctgatggactgagtatggttgtgaaagaaagaaatatcaatgatgactccagtgttttggctta------attaaGTATCTTGACATT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I a score=989705.000000 s hg38.chr20_KI270870v1_alt 170039 105 + 183433 cctgtaatcccag-----ccct-----ttgggaagccgaggtcggaggatcgcttgatcgc-----ttcaagattgc---agtgagctatgattgcaccactg-----------------cactccagcctaggtgac---ag s panTro5.chr20 66505473 105 + 66533130 cctgtaatcccag-----ccct-----ttgggaagccgaggtcggaggattgcttgatcgc-----ttcaagactgc---agtgagctatgattgcaccactg-----------------cactccagcctaggtgac---ag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172686 105 + 62195757 cctgtaatcccag-----ccct-----ttgggaagccgaggtcggaggattgcttgatcgc-----ttcaagactgc---agtgagctatgattgcaccactg-----------------cactccagcctaggtgac---ag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559127 105 - 578057 cctgtaatcccag-----ccct-----ttgggaagccgaggtcggaggatcgcttgatcgc-----ttcaagactgc---agtgagctatgattgcaccactg-----------------cactccagcctaggtgac---ag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080609 107 - 110113093 cctgtaatcccag-----ccct-----ttgggaggctgaggtcggaggatcgcttgatcgc-----ttcaagactgc---agtgagctgtgattgcgccactg-----------------cactccagcctaggtgac-agag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820349 112 - 92844088 cctgtaatcccag-----ccct-----ttgggaggccaaggctggaggatcacttgaacccaggagtttaagactgc---agtgagctatgattgcgccacta-----------------cactccagcctgggtgac-agag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486020 112 + 96509753 cctgtaatcccag-----ccct-----ttgggaggccaaggctggaggatcacttgaacccaggagtttaagactgc---agtgagctatgattgcgccacta-----------------cactccagcctgggtgac-agag i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16955974 112 - 16982598 cctgtaatcccag-----ccct-----ttgggaggccaaggctggaggatcacttgaacccaggagtttaagactgc---agtgagctatgattgcgccacta-----------------cactccagcctgggtgac-agag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3757933 112 - 3785965 cctgtaatcccag-----ccct-----ttgggaggccaaggctggaggatcgcttgaacccaggagtttaagactgc---agtgagctatgattgcgccacta-----------------cactccagcctgggtgac-agag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90347911 112 - 90373283 cctgtaatcccag-----ccct-----ttgggaggccaaggctggaggatcgcttgaacccaggagtttaagactgc---agtgagctatgattgcgccactg-----------------cactccagcctgggtgac-agag i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148666 112 - 179258 cctgtaatcccag-----ccct-----ttgggaggccaaggctggaggatcgcttgaacccaggagtttaagactgc---agtgagctatgattgcgccacta-----------------cactccagcctgggtgac-agag i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5618218 112 - 5823884 cctgtaatcccag-----ccct-----ttgggaggccaaggctggaggatcgcttgaacccaggagtttaagactgc---agtgagctatgattgcgccactg-----------------cactccagcctgggtgac-agag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 105440 113 + 372756 cctgtaatcccag-----ccct-----ttgggaggcggaggctggagagttgcttaaacccaggagttcaagactgc---aataagctatgattgcaccactt-----------------tactccagcctaggtgataagac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338597 112 + 16356641 cctgtaatcccag-----ccct-----ttgggagaccgaggctggagggttgcttaaacccaggacttcaagactgc---agtgagctatgattgcaccaatg-----------------cactccagcctaggtgac-agag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1212690 103 + 1231380 cctgtaatcccag-----ccct-----ttgggaggccgaggctggagggttgcttaaacccaggagttcaagactgc---agtgagctatgattgcaccagtg-----------------cactccagcctag---------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2738971 112 + 11732439 cctgtaatcctag-----ccct-----ttgggagaccgaggctggagggttgcttaaacccaggagttcaagactgc---agtgagctatgattgcaccactg-----------------cactccagcctaggtgac-agag i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22905579 109 + 22939663 cttgtggacctag-----ctac-----ttgtgaaactgaggtaggaagattacttgaat-caagactttgaggttgg---agtgagctgtgacagtgccacta-----------------ccctcatgcctgg--gGC-AAAG i otoGar3.GL873542 I 133 I 304 s canFam3.chr24 47655153 68 + 47698779 TTTTTAGTCGTCA-----CCAT--------GGATGCC-----------ACCACTTCGTTTC-----TTTATGGTTGTTAGAGAAAATCTTAACTGTA---------------------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 323124 132 - 397369 CTTATCAAGCTAGTAAGATTCTGAATATTGGAAATCTCAAGTTATAATACT--TAGAAGCCA----TGTAAGAAAGCATTAGTGTTCTAT-ATTGTAGCATTGTTTCTTTGTAGTTGTTACAAGCCATTTTAGAAAAT-A--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I a score=90161.000000 s hg38.chr20_KI270870v1_alt 170144 13 + 183433 tgagactccgtct s panTro5.chr20 66505578 13 + 66533130 tgagaccccgtct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172791 13 + 62195757 tgagaccccgtct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559232 13 - 578057 tgagaccccgtct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080716 13 - 110113093 tgagaccctgtct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820461 13 - 92844088 cgggacctcgtct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486132 13 + 96509753 cgggacctcgtct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956086 13 - 16982598 cgggacctcgtct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758045 13 - 3785965 cgggacctcgtct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348023 13 - 90373283 cgggacctcgtct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148778 13 - 179258 cgggacctcgtct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5618330 13 - 5823884 cgggaccttgtct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 105553 13 + 372756 tgagaccctgtct i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338709 13 + 16356641 tgagaccctgttt i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2739083 13 + 11732439 tgagaccctgtct i aotNan1.NW_018500483v1 C 0 C 0 s dasNov3.JH569290 323256 9 - 397369 -TGAACAGTA--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47655221 0 + 47698779 C e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e cebCap1.NW_016107870v1 1212793 0 + 1231380 C e otoGar3.GL873542 22905688 304 + 22939663 I a score=1409985.000000 s hg38.chr20_KI270870v1_alt 170157 124 + 183433 ATAATTGATTTTTGTGGATATGGAATGATAATTTTGTTTTTTTTTTCTA-AGTCTGTATAAATTGGAATTTGGTGAAGTTTTGAGACCGATTATTTTGGCTTT-ATGCTATAGATTGCTACCTTCA s panTro5.chr20 66505591 123 + 66533130 ATAATTGATTTTTGTGGATATGGAATGATAATTTTG-TTTTTTTTTCTA-AGTCTGTATAAATTGGAATTTGGTGAAGTTTTGAGACCGATTATTTTGGCTTT-ATGCTATAGATTGCTACCTTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172804 122 + 62195757 ATAATTGATTTTTGTGGATATGGAATGATAATTTTG--TTTTTTTTCTA-AGTCTGTATAAATTGGAATTTGGTGAAGTTTTGAGACCGATTATTTTGGCTTT-ATGCTATAGATTGCTACCTTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559245 124 - 578057 ATAATTGATTTTTGTGGATATGGAATGATAATTTTGTTTTTTTTTTCTA-AGTCTGTATAAGTTGGAATTTGGTGAAGTTTTGAGATCGATTATTTTGGCTTT-AGGCTATAGATTGCTACCTTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080729 123 - 110113093 GTAATTGATTTTTGTGGATATGGAATGATAATTTTG-TTTTTTTTTCTA-AGTCTGTGTAAGTTGGAATTTGCTGAAGTTTTGAGACCAATTATTTTGGCTTT-AGGCTATAGATTGCTACCTTTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820474 124 - 92844088 ctaaTTGAATTTTGTGGATATGGAATGAGAATTTTGTTTTTTTTTTCTA-AGTCTGTATAAATTGGAATTTGGTGAAGTTTTGAGACCGATTATTTTGACTTT-AGGCTATAGATTGCTACCTTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486145 124 + 96509753 ctaaTTGAATTTTGTGGATATGGAATGAGAATTTTGTTTTTTTTTTCTA-AGTCTGTATAAATTGGAATTTGGTGAAGTTTTGAGACCGATTATTTTGACTTT-AGGCTATAGATTGCTACCTTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956099 124 - 16982598 ctaaTTGAGTTTTGTGGATATGGAATGAGAATTTTGTTTTTTTTTTCTA-AGTCTGTATAAATTGGAATTTGGTGAAGTTTTGAGACCGATTATTTTGACTTT-AGGCTATAGATTGCTACCTTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758058 124 - 3785965 ctaaTTGAGTTTTGTGGATATGGAATGAGAATTTTGTTTTTTTTTCCTA-AGTCTGTGTAAATTGGAATTTGGTGAAGTTTTGAGACCGATTATTTTGACTTT-AGGCTATAGATTGCTACCTTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348036 124 - 90373283 ctaaTTGAGTTTTGTGGATATGGAGTGAGAATTTTGTTTTTTTTTTCTA-AGTCTGTATAAATTGGAATTTGGTGAAGTTTTGAGACCGATTATTTTGACTTT-AGGCTATAGATTGCTACCTTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148791 124 - 179258 cTAATTGAGTTTTGTGGATATGGAATGAGAATTTTGTTTTTTTTTTCTA-AGTCTGTGTAAATTGGAATTTGGTGAAGTTTTGAGACCGAGTATTTTGACTTT-AGGCTATAGATTGCTACCTTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5618343 124 - 5823884 ctaaTTGAGTTTTGTGGATATGGAATGAGAATTTTTTTTTTTTTCTCTA-AGTCTGTATAAATTTGAGTTTGGTGAAGTTTTGAGACCGATTATTTTGACTTT-AGGCTATAGATTGCTACCTTCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 105566 122 + 372756 cTACTTGATTTTTGTGAATATGGAATGAGAATTTGG--GTTTCTTTATATAGTTTGTATAAATTGGAATTTGGTGAAGTTTTGGGACTGATCA-TTTGGCTTT-TGGCTGTAGATTGCTACCTTCA i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338722 121 + 16356641 cTCATTGATTTTTGTGGATATGGAACGAGAATTTGG--ATTTCTTTATA-AGTTTGTATCAATTGGAATTTGGTGAAGTTTTGGGACTGATTA-TTTGGCTTT-TGGCTGTAGATTGCTACCTTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1212793 108 + 1231380 -------------gtgGATGTGGAATGAGAATTTGG--GTTTCTTTATA-AGTTTGTATAAATTGGAATTTGGTGAAGTTTTGGGACTGATTA-TTTGGCTTT-TGGCTGTAGATTGCCACCTTCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2739096 121 + 11732439 cTAATTGATTTTTGTGGATATGGAATGAGAATTTGG--ATTTCTTTATA-AGTTTGTATAAATTGAAATTTGGTGACGTTTTGGGACTGATTA-TTTGGCTTT-TGGCTGTAGATTGCTACCTTCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22905992 120 + 22939663 ACAATTGA-TTTTGTGAATATGGAATTATAATTTTA--GTGTCTTTATA-AGTTTGTACACTTTGGAATTCGGTAAAGTTTTGAGACTGATCATTTTG-CTTT-AGGCTATAGATTGCTACCTTCA i otoGar3.GL873542 I 304 C 0 s canFam3.chr24 47655221 113 + 47698779 ACAGTTGATTTTTTTGAGTATGGAATCAAATTTTTG---GTTCTTTATA-AGTTTGAA-------GACTTTGGTGAAGTTTTGAGACTGATCA-TATGACTTT-AGGCTATAGATTGTTATCCTCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 323265 114 - 397369 GCAATTGATTTTTATAGATACGGAATGAAAATTTTG--GTTTCTTTAGA-AGTTTGTA---------ATGTGGAGAAGTTTTGAGACTAATCATTTCTGCTTTAAGGCTATGGATTGCTACCTTCA i dasNov3.JH569290 C 0 I 5798 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I a score=1971028.000000 s hg38.chr20_KI270870v1_alt 170281 185 + 183433 GGTGTAAAAGTGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-CGTAACTTCTCTTCAATTGAGACTGTTGTGATCCCTGTGCTTTGAGAAGAGAACACAGTGCCCAGATTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAACGTAGCTGAAAAAT---AGG---GGCTATAGCTAAGGTAGAACCT s panTro5.chr20 66505714 185 + 66533130 GGTGTAAAAGTGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-CGTAACTTCTCTTCGATTGAGACTGTTGTGATCCCTGTGCTTTGAGAAGAGAACACAGTGCCCAGATTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAACGTAGCTGAAAAAT---AGG---AGCTATAGCTAAGGTAGAACCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62172926 185 + 62195757 GGTGTAAAAGTGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-CGTAACTTCTCTTCGATTGAGACTGTTGTGATCCCTGTGCTTTGAGAAGAGAACACAGTGCCCAGATTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAACGTAGCTGAAAAAT---AGG---AGCTATAGCTAAGGTAGAACCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559369 185 - 578057 GGTGTAGAAGTGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-CGTAACTTCTCTTCGATTGAGACTGTTGTGATCCCCGTGCTTTGAGAAGAGAACACAGTGCCCAGATTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAACGTAGTTGAAAAAT---AGG---AGCTATAGCTAAGGTAGAACCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110080852 187 - 110113093 GGTGTAAAAATGTGTAGAT-TTTTAC-------------AATGCTTTTTGAC-CTTAACTTCTCTTCGATTGAGACTGTTGTGATCCCCGTGCTTTGAGAAGAGAACACAGTGCCCAGATTATTTATCATTTTTGAATTTGGGAATATTGTGATTTCCTCCAACGTAGCTGAAAAAT---AGG---AGCTATAGCTAAGGTAGAACCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820598 185 - 92844088 GGTGTAAAAATGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-TTTAACTTCTCTTCGATGGAAACTGTTGTGATCCTTGTGCTTTGAGAAGAGAACACGGTGCCCAGGTTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAATGTAGCTGAAAAAT---TGG---AGCTATAGCTAAGGTAGAACCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486269 185 + 96509753 GGTGTAAAAATGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-TTTAACTTCTCTTCGATGGAAACTGTTGTGATCCTTGTGCTTTGAGAAGAGAACACGGTGCCCAGGTTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAATGTAGCTGAAAAAT---TGG---AGCTATAGCTAAGGTAGAACCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956223 185 - 16982598 GGTGTAAAAATGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-TTTAACTTCTCTTCGATGGAAACTGTTGTGATCCTTGTGCTTTGAGAAGAGAACACGGTGCCCAGGTTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAATGTAGCTGAAAAAT---TGG---AGCTATAGCTAAGGGAGAACCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758182 185 - 3785965 GGTGTAAAAATGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-TTTAACTTCTCTTCGATTGAAACTGTTGTGATCCTTGTGCTTTGAGAAGAGAACACGGTGCCCAGGTTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAATGTAGCTGAAAAAT---TGG---AGCTATAGCTAAGGTAGAACCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348160 185 - 90373283 GGTGTAAAAATGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-TTTAACTTCTCTTCGATTGAAACTGTTGTGATCCTTGTGCTTTGAGAAGAGAACACGGTGCCCAGGTTTTTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAATGTAGCTGAAAAAT---TGG---AGCTATAGCTAAGGTAGAACCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 148915 185 - 179258 GGTGTAAAAATGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-TTTAACTTCTCTTCGATTGAAACTGTTGTGATCCTTGTGCTTTGAGAAGAGAACACGGTGCCCAGGTTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAATGTAGCTGAAAAAT---TGG---AGCTATAGCTAAGGTAGAACCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5618467 186 - 5823884 GGTGTAAAAATGTGTAGAT-TTTTAT-------------AATGCTTTTTGACTTTTAACTTCTCTTCGATTGAAACTGTTGTGATCTCTGTGCTTTGAGAAGAGAACATGGTGGCTAGGTTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCAATGTAGCTGAAAAAT---TGG---AGCTATAGCTAAGGTAGAACCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 105688 172 + 372756 GATATAACAGTGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-CTTAATTTCTCTTCAATTGAGACTGTTGTGGCCCGCGTGCTTTGAGAAG-------AGTGCTCAGATTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCATTGTAGCTGAAAAAT---TGG---------AGCTAAGGTAAAATCT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16338843 179 + 16356641 GATATAACAGTGTGTAGAT-TTCTAT-------------AATGCTTTTTGAC-CTTAATTTCTCTTTGATTGAGACTGTTGTGGTCCCTGTGCTTTGAGAAGAGAACACAGTGCTCAGATTATTTGTCATTTTTTAATTTGGGA--GCTGTGATTTCCTCCATTGTAGCTGAAAAAT---TGG---------AGCTAAGGTAGAATCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1212901 179 + 1231380 GATATAACAGTGTGTAGAT-TTTTGT-------------AATGCTTTTTGAC-CTTAATTTCTCTTCAATTGAGACTGTTGTGGCCCCTGTGCTTTCAGAAGACAACACAGTGCTCAGATTATTTATCATTTTTGAATTTGGGA--ACTGTGATTTCCTCCATTGTAGCCGAAAAAT---TGG---------AACTAAGGTAGAATCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2739217 172 + 11732439 GATATAACAGTGTGTAGAT-TTTTAT-------------AATGCTTTTTGAC-CTTAATTTCTCTTCGATTGAGACTGTTGTGGCCCCTG-------AGAAGAGAACACAGTGCTTAGATTATTTATCATTTTTGAATTTGGGA--ATTGTGATTTCCTCCATTGTAGCTGAAAAAT---TGG---------AGCTGAAGTAGAATCT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22906112 194 + 22939663 AATTTTTAAATGTGTAGGC-TTTTATATTT---AAGCTAAATGCTTTTTGAC-CTTAATTTATCTTGGATTGAGACTGTGGTGGTTTCCATGCTTCAAAAAGAGAGCATAGTGCCTAGA----TTATAATTTTTGAATTTAGGA--ATTGTGATTCTCTCCATTGTAGCAGAAAAATCAGAGG---AGCTGCAACTAAGATGGCATTT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47655334 179 + 47698779 AATATATAGGTTTATTTGTGTTTTGTTTTTTTAAAGCTAAATACTTTTTGAA-CTTAATTTGTCTTGGATTGAGACTG--------------CTTTGGGAATA---------GCTCAGGTTATGTATCATTGTGGACTTAGGGA--AGGGTGATTCCCTCCAGTGGGGCAGAGAAAT---TGGGGGAGCTAAGGATGAGATGCTGTTT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e mm10.chr2 181843217 155 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I a score=1069487.000000 s hg38.chr20_KI270870v1_alt 170466 97 + 183433 T---GGGGAGAAATAGGTGATCAAGCTGACTAGATTAGAAATACTATAGGAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATGG s panTro5.chr20 66505899 97 + 66533130 T---GGGGAGAAATAGGTGATCAAGCTGACTAGGTTAGAAATACTATAGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173111 97 + 62195757 T---GGGGAGAAATAGGTGATCAAGCTGACTAGATTAGAAATACTATAGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559554 97 - 578057 T---GGGGAGAAATAGGTGATCAAGCTGACTAGATTAGAAATACTATAGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081039 97 - 110113093 T---GGGGAGAAATAGGTGATCAAGCTGGCTAGATTAGAAATTCTATAGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820783 97 - 92844088 T---GGGGAGAAATAGGTGCTCTAGCTGACTAGATTAGAAATGCTGTTGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486454 97 + 96509753 T---GGGGAGAAATAGGTGCTCTAGCTGACTAGATTAGAAATGCTGTTGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956408 97 - 16982598 T---GGGGAGAAATAGGTGCTCTAGCTGACTAGATTAGAAATGCTGTTGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758367 97 - 3785965 T---GGGGAGAAATAGGTGCTCTAGCTGACTAGATTGGAAATGCTGTTGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATgg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348345 97 - 90373283 T---GGGGAGAAATAGGTTCTCTAGCTGACTAGATTAGAAATGCTGTTGATAAGAGCCAAAATGC---TTAGGAAAAGATGACTTGAAGTAAGCCTGAAATgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149100 97 - 179258 T---GGGGAGAAATAGGTGCTCTAGCTGACTAGATTAGAAATGCTGTTGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAATgg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5618653 97 - 5823884 T---GGGGAGAAATAGGTGATCTAGCTGACTAGATTAGAAATGCTGTTGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAAGCCTGAAGTgg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 105860 96 + 372756 T----GGGAGAAATAGATGATCAAGCTGACTCAGTTAGAAATGCTACTGAAAAGAGCCAAAATGC---TTAGGAAAAGGTCACTTAAAGTAATCCTGAAGTga i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16339022 100 + 16356641 T---GGGGAGAAATAGGTGATCAAGCTGACTCAATTAGAAATGCTATTGAAAAAAGCCAAAATGCTTATTAGGAAAAGATGACTTACAGTAATCCTGAAGTgg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1213080 97 + 1231380 T---GGGGAGAAATAGGTGATCAAGCTGACTCAATTAGAAATGCTATTGAAAAGAGCCAAAATGC---TTAGGAAAAGATGACTTAAAGTAATCCTGAAGTgg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2739389 97 + 11732439 T---GGGGAGAAATAGGTGATCAAGCTGACTCAATTAGAAATGGTATTGAAAAGATCCAAAATGC---TGAGGAAAAGATGACTTAAAGTAATCCTGAAGTgg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22906306 100 + 22939663 TTTTTTGTGGAAATAGATCATTAAACTGACTAGATTAGAAATGTTATAGAAAAGAACCAAAATTC---TTGGGAACACATAACTTAAGGCAAGCCTGAAGTAG i otoGar3.GL873542 C 0 I 316 s mm10.chr2 181843372 74 + 182113224 T---GGGGGAAAATAAATAATAAAACTGCCTATATTAGAAATGCTATTGAAAAGAGCCTAAGGGT------------GAAGCCTTGTGG-------------- i mm10.chr2 I 155 C 0 s canFam3.chr24 47655513 43 + 47698779 T---GGGGAGA------------------CTAGGTTAGAAATGCTATTGAAAAGAACTGAGATG--------------------------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e micMur3.chr18 56922823 1965 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I a score=339329.000000 s hg38.chr20_KI270870v1_alt 170563 37 + 183433 TGgggcgtggtggct--cacgcctgtaatctcagcactt s panTro5.chr20 66505996 37 + 66533130 ccgggcgcggtggct--cacgcctgtaatctcagcactt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173208 37 + 62195757 ccgggcgcggtggct--cacgcctgtaatctcagcactt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559651 37 - 578057 ccaggcgcggtggct--cacgcctgtaatctcagcactt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081136 37 - 110113093 ccgggtgcggtggct--cacgcctgtaatctcggcactt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820880 37 - 92844088 ccaggcgtggtggct--cacgcctgtaataccagcactt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486551 37 + 96509753 ccaggcgtggtggct--cacgcctgtaataccagcactt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956505 37 - 16982598 ccaggcgtggtggct--cacgcctgtaatatcagcactt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758464 37 - 3785965 ccaggcgtggtggct--cacgcctgtaatatcagcactt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348442 37 - 90373283 ccaggcgtggtggct--cacgcctgtaatatcagcactt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149197 37 - 179258 ccaggcgtggtggct--cacgcctgtaatatcagcactt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5618750 37 - 5823884 ccaggcgtggtggct--cccgcctgtaatatcagcactt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 105956 39 + 372756 ccaggcacggaggctcacacacccataatctcagcactt i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16339122 39 + 16356641 ccaggcacagaggctcacacgcccataatctcagcactt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1213177 39 + 1231380 ccaggcacagaggctcacacgcccataatctcagcactt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2739486 39 + 11732439 ccaggcacggaggctcacacgcccataatctcagcactt i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181843446 33 + 182113224 ----TGgtagtggca--catgcctttaatcccagcactc i mm10.chr2 C 0 C 0 s canFam3.chr24 47655556 10 + 47698779 -----------------------------CTCAGTTCTT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e micMur3.chr18 56922823 1965 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=563243.000000 s hg38.chr20_KI270870v1_alt 170600 59 + 183433 tgggaggccgaggc--aggcagatggcttgaggtctggagttcaagaccaacctggccaac s panTro5.chr20 66506033 59 + 66533130 tgggaggccgaggc--aggcacatggcttgaggtctggagttcaagaccaacctggccaac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173245 59 + 62195757 tgggaggccgaggc--aggcagatggcttgaggtctggagttcaagaccaacctggccaac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559688 59 - 578057 tgggaggccgaggc--aggcagatggcttgaggtctggagttcaagaccaacctggccaac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081173 59 - 110113093 tgggaggccgagtc--aggtagatggcttgaggtctggagttcaagaccagcctggccaac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820917 57 - 92844088 tgggaggctgaggc--aggcagatcgcttgaggtc--gagtttgagaccaacctggccaac i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486588 57 + 96509753 tgggaggctgaggc--aggcagatcgcttgaggtc--gagtttgagaccaacctggccaac i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956542 57 - 16982598 tgggaggctgaggc--aggcagatcgcttgaggtt--gagtttgagaccaacctggccaac i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758501 57 - 3785965 tgggaggctgaggc--aggcagatcgcttgaggtc--gagtttgagaccaacctggccaac i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348479 57 - 90373283 tgggaggctgaggc--aggcagatcgcttgaggtc--gagtttgagaccaacctggccaac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149234 57 - 179258 tgggaggctgaggc--aggcagattgcttgaggtc--gagtttgagaccaacctggccaac i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5618787 59 - 5823884 tgggaggctgaggc--aggcagatcgcttgaggtctggagtttgagaccaacctggccaac i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 105995 59 + 372756 tgtgaggccgaggc--tggcagattgcttgaggtcaggattttgagaccaacctggccgac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16339161 59 + 16356641 tgtgatgccaaggc--tggcagatcgcttgaggtcaggagttcgagaccaacctggccaac i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1213216 59 + 1231380 tgtgaggccaaggc--tggcagatcacttgaggtcaggagtttgagaccaacctggccgac i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2739525 59 + 11732439 cgtgaggccgaggc--tggcagatcgcttgaggtcaggagttcgagaccaacctggccaac i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181843479 49 + 182113224 ---aaggcagaggcagaggcaga---------ggcaggcgtttgaggctggcctgttctac i mm10.chr2 C 0 I 506 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47655566 0 + 47698779 C e micMur3.chr18 56922823 1965 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=1398363.000000 s hg38.chr20_KI270870v1_alt 170659 152 + 183433 gtggtgaaaccctgtccctaccaaaagtataagaaagtacctgggtgtggtggtgcacaccta-taatcccagctactcaggaggctgaggctggagaatcacttgaacctgggaggcgaaggttacagtgag----cagagatggtgccactgcac s panTro5.chr20 66506092 152 + 66533130 gtggtgaaaccctgtccctaccaaaagtataagaaagtacctgggtgtggtggtgcgcaccta-taatctcagctactcaggaggctgaggctggagaatcacttgaacctgggaggcgaaggttacagtgag----cagagatggtgccactgcac i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173304 152 + 62195757 gtggtgaaaccctgtccctaccaaaagtataagaaagtacctgggtgtggtggtgcgcaccta-taatctcagctactcaggaggctgaggctggagaatcacttgaacctgggaggcgaaggttacagtgag----cagagatggtgccactgcac i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559747 152 - 578057 gtggtgaaaccctgtctctaccaaaagtataagaaagtagctgggtgtggtggtgcgcaccta-taatcccagctactcaggaggctgaggctggagaatcacttgaacctgggaggcgaaggttacagtgag----cagagatggtgccactgcac i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081232 152 - 110113093 atggtgaaaccctgtctctaccaaaagtataaaaaattatccgggtgtggtggtgcgcaccta-taatcccagctactcaggaggctgaggctggagaatcacttgaacctgggaggcgaaggttacagtgag----cagagatggtgccactgcac i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92820974 152 - 92844088 atggtgaaaccctatctctaccaaaagtataaaaaattagctgggtgtggtggtgcgcacctg-tagtccca-ctaaccaggaggctgaggctggagaatcacttgaacctgggaggcggaggtcacagtgaggttacagag---gtgccactgcac i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486645 152 + 96509753 atggtgaaaccctatctctaccaaaagtataaaaaattagctgggtgtggtggtgcgcacctg-tagtccca-ctaaccaggaggctgaggctggagaatcacttgaacctgggaggcggaggtcacagtgaggttacagag---gtgccactgcac i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956599 152 - 16982598 atggtgaaaccctatctctaccaaaagtataaaaaattagctgggtgtggtggtgcgcaccta-taatccca-ctaaccaggaggctgaggctggagaatcacttgaacctgggaggcggaggttacagtgaggttacagag---gtgccactgcac i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758558 155 - 3785965 atggtgaaacgctatctctaccaaaagtataaaaaattagctgggtgtggtggtgcgcaccta-taatccca-ctaaccaggaggctgaggctggagaatcacttgaacctgggaggcggaggttacagtgaggttacagagatcgcgccactgcac i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348536 155 - 90373283 atggtgaaaccctctctctaccaaaagtataaaaagttagccgggtgtggtggtgcacaccta-taatccca-ctgatgtggaggctgaggctggagaatcacttgaacctgggaggcggaggttacagtgaggttacagagatcgcgccactgcac i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149291 155 - 179258 atggtgaaatgctatctctaccaaaagtataaaaaattagctgggtgtggtggtgcgcaccta-taatccca-ctaaccaggaggctgaggctggagaatcacttgaacctgggaggcggaggtcacagtgaggttacagagatcgcgccactgcac i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5618846 156 - 5823884 aaggtgaaaccctatctctaccaaaagtataaaaaattagccgggtgtggtggcacgcaccta-taatcccagctactcaggaggctgaggctggagaatcacttgaacctgggaggcggaggttacagtgaggttacagagatcgcgccactgcac i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 106054 152 + 372756 atggtgaaaccctgtctctaccaaaaatataaaaaattacctgggtgtggtggtatgcaccta-taatcccagctacttgggaggctgaggcaggtgaatcacttgaacctgggagatggaggctgtagtgag----cagagatcgtgccactgcac i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16339220 153 + 16356641 atggtgaaaccctgtctctatcaaaaagataaaaaattagccgggtgtggtggtgcacgcctattaatcccagctacttgggaggctgaggcaggtgaatcacttgaacccgggagatggaggctgcagtgag----cagagatcgtgccactgcac i saiBol1.JH378156 C 0 M 100 s cebCap1.NW_016107870v1 1213275 152 + 1231380 atggtgaaaccctgtctctaccaaaaatataaaaatttagccgggtgtggtggtgcatgccta-taatcccagctacttgggaggctgaggcaggtgagtcacttgaacccaggagatggagtctgcagtgag----cagagatcgtgccactgcac i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2739584 152 + 11732439 atggtgaaaccctgtctctaccaaaaatatacaaaattagccgggtgtggtggtgcgtgccta-taatcccagctacttgggaggctgagacaggtgaatcacttgaacccgggagatggaggctgtggtgag----cagagatcgtgccactgcac i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47655566 0 + 47698779 C e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=271490.000000 s hg38.chr20_KI270870v1_alt 170811 47 + 183433 tccagtctggctaacggagccagactccatctc-------aaaaag-aaaaaaaa s panTro5.chr20 66506244 46 + 66533130 tccagtctggctaacggagccagactccatctg-------aaaaag--aaaaaaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173456 46 + 62195757 tccagtctggctaacggagccagactccatctc-------aaaaag--aaaaaaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559899 46 - 578057 tccagtctggctaacagagccagactccatctc-------aaaaag--aaaaaaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081384 48 - 110113093 tccagtctggctaacagagccagtctccatctc-------aaaaaggaaaaaaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821126 29 - 92844088 cccaga------------------ctccatctc-------aaaaag-aaaaaagg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486797 29 + 96509753 cgcagc------------------ctccatctc-------aaaaag-aaaaaagg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956751 47 - 16982598 cccagcctgggtaaaagagcgagactccatctc-------aaaaag-aaaaaagg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758713 47 - 3785965 cccaacctgggtaaaagagtgagactccatctc-------aaagag-aaaaaagg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348691 47 - 90373283 cccagcctgggtaaaagagcgagactccatctc-------aaaaag-aaaaaagg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149446 47 - 179258 cccagcctgggtaaaagagcgagactccatctc-------aaaaag-aaaaaagg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619002 47 - 5823884 cccagcctgggtaaaagagcgagactccatctc-------aaaaag-aaaaaagg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 106206 49 + 372756 tccagcctgggtgacagagcaagactccatctc-----aaaaaaaa-aaaaaaaa i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1213427 54 + 1231380 tccagcctgggtgacagaacaagactccatctcaaaaaaaaaaaaa-aaaaaaaa i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2739736 47 + 11732439 tccagcctaggtgacggagcaagactccatctc-------aaaaaa-aaaaaaaa i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e canFam3.chr24 47655566 0 + 47698779 C e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I e saiBol1.JH378156 16339373 100 + 16356641 M e otoGar3.GL873542 22906406 316 + 22939663 I a score=345710.000000 s hg38.chr20_KI270870v1_alt 170858 37 + 183433 aaaGTAAGCCTGAAATGGCCTTGCTGTACTTGACATC s panTro5.chr20 66506290 37 + 66533130 aaaGTAAGCCTGAAATGGCCTTGCTGTACTTGGCATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173502 37 + 62195757 aaaGTAAGCCTGAAATGGCCTTGCCGTACTTGGCATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559945 37 - 578057 aaaGTAAGCCTGAAATGGCCTTGCTGTACTTGACATC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081432 37 - 110113093 aaaGTAAGCCTGAAATGGCCTTGCTGTACTTGACAAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821155 37 - 92844088 aaaGTAAGCCTGAAATGGCCTTGCTGTATTTGACATC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486826 37 + 96509753 aaaGTAAGCCTGAAACGGCCTTGCTGTAGTTGACATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956798 37 - 16982598 aaaGTAAGCCTGAAATGGCCTTGCTGTACTTGACATC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758760 37 - 3785965 aaaGTAAGCCTGAAATGGCCTTGCTGTACTTGACATC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348738 37 - 90373283 aaaGGAAGCCTGAAATGGCCTTGCTGTACTTGACATC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149493 37 - 179258 aaaGTAAGCCTGAAATGGCCTTGCTGTACTTGACATC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619049 37 - 5823884 aaaGTAAGCCTGAAATGGCCTTGCCGTACTTGACATC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 106255 37 + 372756 aaaGTAAGCCTGAAAGGGCCTTGCTGTACTTGGCATC i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1213481 37 + 1231380 aaaGTAGGCCTGAACGGGCTTTGCTGTACTTGGCGTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2739783 37 + 11732439 aaaGCAAGTCTGAAAGGGCTTTGCTGTACTTGGCATC i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47655566 37 + 47698779 ACAGTAAATGTGAGGTGACCTGTTGGCACTTGACATT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1913336 1463 - 2029793 I e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56922823 1965 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I e saiBol1.JH378156 16339373 100 + 16356641 M e otoGar3.GL873542 22906406 316 + 22939663 I a score=156214.000000 s hg38.chr20_KI270870v1_alt 170895 13 + 183433 CCCTAGAAGTTAT s panTro5.chr20 66506327 13 + 66533130 CCCTAGAAGTTAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173539 13 + 62195757 CCCTAGAAGTTAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559982 13 - 578057 CCCTAGAAGTTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081469 13 - 110113093 CCCTCGCAGTTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821192 13 - 92844088 CCCTAGAAGTTAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486863 13 + 96509753 CCCTAGAAGTTAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956835 13 - 16982598 CCCTAGAAGTTAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758797 13 - 3785965 CCCTAGAAGTTAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348775 13 - 90373283 CCCTAGAAGTTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149530 13 - 179258 CCCTAGAAGTTAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619086 13 - 5823884 CCCTAGAAGTTAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 106292 13 + 372756 CCTTAGAAGATAT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1213518 13 + 1231380 CTCTAGAAGTTAT i cebCap1.NW_016107870v1 C 0 I 318 s aotNan1.NW_018500483v1 2739820 13 + 11732439 CCCTAGAAGTTAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56924788 13 + 57149010 CCCTAGAAGTTAT i micMur3.chr18 I 1965 C 0 s proCoq1.NW_012150197v1 1914799 13 - 2029793 CCCTAGAAGTGAT i proCoq1.NW_012150197v1 I 1463 C 0 s canFam3.chr24 47655603 13 + 47698779 CCCTAGGAATTAG i canFam3.chr24 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e dasNov3.JH569290 323379 5798 - 397369 I e saiBol1.JH378156 16339373 100 + 16356641 M e otoGar3.GL873542 22906406 316 + 22939663 I a score=323933.000000 s hg38.chr20_KI270870v1_alt 170908 32 + 183433 AAGGAAA-GGCCTTCCAACTTGATACAGTTGCT s panTro5.chr20 66506340 32 + 66533130 AAGGAAA-GGCCTTCCAACTTGATACGGTTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173552 32 + 62195757 AAGGAAA-GGCCTTCCAACTTGATACGGTTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 559995 32 - 578057 GAGGAAA-GGCCTTCCAACTTGATATGGTTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081482 32 - 110113093 AAGGAAA-GGCCTTCCAACTCGATATGCTTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821205 32 - 92844088 AAGAAAA-GGCCTTCCAACTTGATACTGTTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486876 32 + 96509753 AAGAAAA-GGCCTTCCAACTTGATATTGTTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956848 32 - 16982598 AAGAAAA-GGCCTTCCAACTTGATATTGTTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758810 32 - 3785965 AAGAAAA-GGCCTTCCAACTTGATATTGTTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348788 32 - 90373283 AAGAAAA-GGCCTTCCAACTTGATACTGTTGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149543 32 - 179258 AAGAAAA-GGCCTTCCAACTTGATATTGTTGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619099 33 - 5823884 AAGAAAAGGGCCTTCCAACTTGATATTGTTGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 106305 32 + 372756 AAAGAGA-GGCCTTCCAACTTGATATTGTTGCT i calJac3.chrUn_GL286459 C 0 C 0 s cebCap1.NW_016107870v1 1213849 32 + 1231380 aaaGAGA-GGCCTTCCAACTTGATGTTATTGCT i cebCap1.NW_016107870v1 I 318 C 0 s aotNan1.NW_018500483v1 2739833 32 + 11732439 AAAGAGA-GGCCTTCCAACTTGATATTGTTGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56924801 32 + 57149010 GAAGAAA-GGGCTTTCAATTTGATACTGTTGCT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1914812 32 - 2029793 AAAGGAA-GGGCTTACAACTTGATACTGTTGCT i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47655616 12 + 47698779 AAAGAAA-TGGCT-------------------- i canFam3.chr24 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e dasNov3.JH569290 323379 5798 - 397369 I e saiBol1.JH378156 16339373 100 + 16356641 M e otoGar3.GL873542 22906406 316 + 22939663 I a score=1794363.000000 s hg38.chr20_KI270870v1_alt 170940 146 + 183433 TTTCTTTCCTGAATCCCCT-GTTTACTGGAAATTTCATTGGATTTTGGGA-GGAGAGAGGTCTGAAGGAAGGAAAGGCCTGTTTTCT----GCTGTAATGGATGTAACATGCTGCTTTGATGCAGTTGAAGGAAGTGACTTCAGGG-TTTGCT s panTro5.chr20 66506372 146 + 66533130 TTTCTTTCCTGAATCCCCT-GTTTACTGGAAATTTCATTGGATTTTGGGA-GGAGAGAGGTCTGAAGGAAGGAAGGGCCTGTTTTCT----GCTGTAATGGATGGAACATGCTGCTTTGATGCAGTTGAAGGAAGTGACTTCAGGG-TTTGCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173584 146 + 62195757 TTTCTTTCCTGAATCCCCT-GTTTACTGGAAATTTCATTGGATTTTGGGA-GGAGAGAGGTCTGAAGGAAGGAAGGGCCTGTTTTCT----GCTGTAATGGATGGAACATGCTGCTTTGATGCAGTTGAAGGAAGTGACTTCAGGG-TTTGCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560027 146 - 578057 TTTCTTTCCTGAATCCCCT-GTTGACTGGGAATTTCATTGGATTTTGGGA-GGAGAGAGGTCTGAAGGAAGGAAAGGCCTGTTTTCT----GCTGTAATGGATGTAACATGCTGCTTTGATGCAGTTGAAGGAAGTGACTTCAGGG-TTTGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081514 146 - 110113093 TCTCTTTCCTGAATCCCCT-GTTTACTGGGAATTTCATTGGATTTTGGGA-GGAGAGAGGTCTGAAGGAAGGAAAGGCCTGTTTTCT----GCTGTAATGGATGTAACATGCTGCTTTGATGCAGTTGAAGGAAGTGACTTCAGGG-TTTGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821237 145 - 92844088 TGTCTTTTCTGAATCCCCT-GTTTACTGGGAATTTCGTTGGATTTTGGGA-GAAGAGACGTCTGAAGGAAGGCA-GGCCTGTTTTCT----GCTGTAATGGATGTGACATGCTGCTTTGATGCAGTTGGAGGAAGTGACTTCAGGG-TTTGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96486908 145 + 96509753 TGTCTTTTCTGAATCCCCT-GTTTACTGGGAATTTCGTTGGATTTTGGGA-GAAGAGACGTCTGAAGGAAGGCA-GGCCTGTTTTCT----GCTGTAATGGATGTGACATGCTGCTTTGATGCAGTTGGAGGAAGTGACTTCAGGG-TTTGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16956880 145 - 16982598 TGTCTTTTCTGAATCCCCT-GTTTACTGGGAATTTCGTTGGATTTTGGGA-GAAGAGACGTCTGAAGGAAGGCA-GGCCTGTTTTCT----GCTGTAATGGATGTGACATGCTGCTTTGATGCAGTTGGAGGAAGTGACTTCAGGG-TTTGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758842 145 - 3785965 TGTCTTTTCTGAATCCCCT-GTTTACTGGGAATTTCGTTGGATTTTGGGA-GAAGAGAGGTCTGAAGGAAGGCA-GGCCTGTTTTCT----GCTGTAATGGATGTGACATGCTGCTTTGATGCAGTTGGAGGAAGTGACTTCAGGG-TTTGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348820 145 - 90373283 TGTCTTTTCTGAATCCCCT-GTGTACTGGGAATTTCGTTGGATTTTGGGA-GAAGAGAGGTCTGAAGGAAGGCA-GGCCTGTTTTCT----GCTGTAATGGATGTGACATGCTGCTTTGATGCAGTTGGAGGAAGTGACTTCAGGG-TTTGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149575 145 - 179258 TGTCTTTTCTGAATCCCCT-GTTTACTGGGAATTTCGTTGGATTTTGGGA-GAAGAGAGGTCTGAAGGAAGGCA-GGCCTGTTTTCT----GCTGTAATGGATGTGACATGCTGCTTTGATGCAGTTGGAGGAAGTGACTTCAGGG-TTTGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619132 143 - 5823884 TCTCTTTTCTGAATCCC---GTTTACTGGGAATTTCATTGGATTTTGGGA-GAAGAGAGGTCTGAAGGAAGGAA-CGCCTGTTTTCT----GCTGTAATGGATGTGACATGCTGCTTTGATGCAGTTGGAGGAAGTGACTTCAGGG-TTTGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 106337 146 + 372756 TCTCTTTTCTGAATCCCCT-GTTTACTGGGAATTTTACTGGATTTTGGGA-GGAGAGAGGTCTGAAGGAAGGAAAGGCCTGTTTTCT----ACTGTAATGGATGTAACATGCTGCTTTGATGCAGTTGAAGGAAGTGACTTTAGGG-TTTACT i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16339473 135 + 16356641 TCTCTTTTCTGAATCCCCT-G------------TTTACTGGATTTCGGGA-GGAGAGAGGTCTGAAGGAAGGAAAGGCCTGTTTTCT----GCTGTAATGGACGTGACATGCTGCTTTGATGCAGTTGAAGGAAGTGACTTTAGGGTTTTGCT i saiBol1.JH378156 M 100 C 0 s cebCap1.NW_016107870v1 1213881 147 + 1231380 TCTCTTTTCTGAATCCCCT-GTTTACTGGGAATTTTACTGGATTTCGGGA-GGAGAGAGGTCTGAAGGAAGGAAAGGCCTGTTCTCT----GCTGTAATGGATGTGACATGCTGCTTTGACGCAGCTGAAGGAAGTGACTTTAGGGTGTTGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2739865 144 + 11732439 TCTCCTTTCTGAATCCC---GTTTACTGGGAATTTTACTGGATTTCGGGA-GGAGAGAGGTCTGAAGGAAGGAAAGGCCTGTTTTCT----ATTGTAATGGATGTGACATGCTGCTTTGATGCAGTTGAAGGAAGTGACTTTAGGG-TTTGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56924833 146 + 57149010 TCTCCTTTCCAAGTCTCCTAATTTACTGGGAATTTCGTTGGATGTTAGGG-CAGGAGAGGTCTGAAGGAAGACAAGCCCTGTT-TCT----GCTGTCGTTGATGTAACATGCTGCTCTGATGTTGTTGAAGGAAGTGGCTGTAGGG-TTTGCT i micMur3.chr18 C 0 I 195 s proCoq1.NW_012150197v1 1914844 146 - 2029793 TCTCTTTTCCAAGTCCCCTAATTTACTGGGAATTTCGTTGGACGTTAGAG-CAGGAGAGATCTGAAGGAAGAAAAGCCCTGTT-TCT----GCTGTAGTTGATGTAACATGCTGCTTTGATGTTTTTGAAGGAAGGGGCTTTAGTG-TTTGCT i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47655628 148 + 47698779 TCTCTTCTCTGAGTCCCCT-GTTTGCTGGGAATGTAATTAGCTGTTGAGATGGGGAGAGATCTAAAGGAAGGAA-GGAAAACTTTTTGGGGGTTGCAGTGGATACTCTGTAATGCTGTGATGTATTTTAAGGAGGTGACT--GGAG-TTTCCT i canFam3.chr24 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e dasNov3.JH569290 323379 5798 - 397369 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=135113.000000 s hg38.chr20_KI270870v1_alt 171086 11 + 183433 GTCATGGATGC s panTro5.chr20 66506518 11 + 66533130 GTCATGGATGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173730 11 + 62195757 GTCATGGATGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560173 11 - 578057 GTCATGGACGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081660 11 - 110113093 GTCATGGATGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821382 11 - 92844088 GTCATGGATGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487053 11 + 96509753 GTCATGGATGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957025 11 - 16982598 GTCATGGATGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758987 11 - 3785965 GTCATGGATGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348965 11 - 90373283 GTCATGGATGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149720 11 - 179258 GTCATGGATGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619275 11 - 5823884 GTCATGGATGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 106483 11 + 372756 GTCATGGATGC i calJac3.chrUn_GL286459 C 0 C 0 s saiBol1.JH378156 16339608 11 + 16356641 GTCATGGATGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1214028 11 + 1231380 GTCATGGACGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2740009 11 + 11732439 GTCACGGATGC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1914990 11 - 2029793 GTCAGGGATGC i proCoq1.NW_012150197v1 C 0 I 187 s canFam3.chr24 47655776 11 + 47698779 TTCCCGGGTAG i canFam3.chr24 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56924979 195 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=1224202.000000 s hg38.chr20_KI270870v1_alt 171097 135 + 183433 GTGTCTTGGCTGTGT----------CTCCAGATGCTG--CAGCTTTTATTCAAGCTTAATAGCAC----TTGGTGCAGAGCACTCCAGAGTGAAACCTCATTGGCTTCCCGGCGCCTGTGGATGTGGGTCTCTC---ATCTGACGGAGTTCTTT- s panTro5.chr20 66506529 134 + 66533130 GTGTCTTGGCTGTGT----------CTCCAGATGCTG--CAGCTTTTATTCAAGCTTAAGAGCAC----TTTGTGCAGAGCACTCCAGAGTGAAACC-CATTGGCTTCCCAGCGCCTGTGGATGTGGGTCTCTC---ATCTGACGGAGTTCTTT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173741 134 + 62195757 GTGTCTTGGCTGTGT----------CTCCAGATGCTG--CAGCTTTTATTCAAGCTTAAGAGCAC----TTTGTGCAGAGCACTCCAGAGTGAAACC-CATTGGCTTCCCAGCGCCTGTGGATGTGGGTCTCTC---ATCTGACGGAGTTCTTT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560184 133 - 578057 GTGTCTTGGCTGTGT----------CTCCAGATGCTG--CAGC--TTATTCAAGCTTAACAGCAC----TTTGTGCAGAGCACTCCAGAGTGAAACCTCATTGGCTTCCCAGTGCCTGTGGATGTGGGTCTCTC---ATCTGACAGAGTTCTTT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081671 133 - 110113093 GTGTCTTGGCTGTGT----------CTCCAGATGCTG--CAGC--TTATTCAACCGTAACAGCAC----TTTGTGCAGAGCACTCCAGAGTGAAACCTCATTGGCTTCCCAGTGCCTGTGAATGTGGGTCTCTC---ATCTGATAGAGTTCTTT- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821393 133 - 92844088 ATGTCTTGGCTGCGT----------CTCCAGATGCTG--CAGC--TTATTCAACCTTAACAGCAC----TTTGTGCAAAGCACTCCAGAGTGAAAGCTCATTGGCTTCCCAGTGCCTGTGAATGTGGCTCTCTT---ATCTGACAGATTTCTTT- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487064 133 + 96509753 ATGTCTTGGCTGCGT----------CTCCAGATGCTG--CAGC--TTATTCAACCTTAACAGCAC----TTTGTGCAAAGCACTCCAGAGTGAAAGCTCATTGGCTTCCCAGTGCCTGTGAATGTGGCTCTCTT---ATCTGACAGATTTCTTT- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957036 133 - 16982598 ATGTCTTGGCTGTGT----------CTCCAGATGCTG--CAGC--TTATTCAACCTTAACAGCAC----TTTGTGCAAAGCACTCCAGAGTGAAAGCTCATTGGCTTCCCAGTGCCTGTGAATGTGGCTCTCTT---ATCTGACAGATTTCTTT- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3758998 133 - 3785965 ATGTCTTGGCTGCGT----------CTCCAGATGCTG--CAGC--TGATTCAACCTTAACAGCAT----TTTGTGCAAAGCACTCCAGAGTGAAAGCTCATTGGCTTCCCAGTGCCTGTGAATGTGGGTCTCTC---ATCTGACAGATTTCTTT- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90348976 133 - 90373283 AGGTCTTGGCTGCGT----------CTCCAGATGCTG--CAGC--TGATTCAACCTTAACAGCAC----TTTGTGCAGAGCACTCCAGAGTGAAAGCTCATTGGCTTCCCAGTGCCTGTGAATGTGGGTCTCTC---ATCTGACAGATTTCTTT- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149731 133 - 179258 ATGTCTTGGCTGCGT----------CTCCAGATGCTG--CAGC--TTATTCAACCTGAACAGCAC----TTTGTGCAAAGCACTCCAGAGTGAAAGCTCATTGGCTTCCCAGTGCCTGTGAATGTGGGTCTCTC---ATCTGACAGATGTCTTT- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619286 132 - 5823884 ATGTCTTGGCTGCGT----------CTCCAGATGCTG--CAGC--TTATTCAACCGTAACAGCAC----TTTGTGCAAAGCACTCCAGAGTGAAAGCTCATTGGCCTCCCAGTGCCTGTGAATGTGGGTCTCTC---ATCTGACAGAT-TCTTT- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chrUn_GL286459 106494 133 + 372756 ACATCTTGGCTGTGT----------CTCCAGATGCTG--CAGC--TTATTCAACCTTAACAGCAT----TTTGTGCAAAGCACTCCAGAGTGAAACCTTATTGGCTTCCCGGTGCCTGTGAATGTGAGTCTCTC---ATCTGACAGAGTTTCTT- i calJac3.chrUn_GL286459 C 0 N 0 s saiBol1.JH378156 16339619 133 + 16356641 ATATCTTGGCTGTGT----------CTCCAGATGCTG--CAGC--TTATTCAACCTTAACAGCAT----TTTGTGCAAAGCACTCCAGAGTTAATCCCCATTGGCTTCCCGGTGCCTGTGAATGTGAGTTTCTC---ATCCGACAGAGTTTCTT- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1214039 131 + 1231380 GTATCTCGGCTGTGC----------CTCCAGACGCTG--CAGC--TTATTCAGCCTTAACAGCAT----TTTGTGCAAAGCACTCCAGAGTGAAACCTCATCGGCTTCCCGGTGCCTGTGAACGTGAATCTCTT---ATCTGCC--AGTTTCTT- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2740020 133 + 11732439 ATATCTTGGCTGTGT----------CTCCAGATGCTG--CAGC--TCATTCAACCTTAACAGCAT----TTTGTGCAAAGCACTCCAGAGCGAAACCTCATCGGCTTCCTGGTGCCTGTGAATGTGAGTCTTTT---ATCTGACAGAGTTTCTT- i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47655787 145 + 47698779 ACTTCTTGCATTTGCAGGGAGGAGGCTGCACGCGCTGGACTGG--CGTCTCTGTCTGGATACCACATATTCTGGGCCACCCTCCCCCG--------TTTATTCCGCCTTCAGCATTGCTTCATGCACGTCACTCCAGAGCTGATGTGAGGCCTGG i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1915001 187 - 2029793 I e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56924979 195 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=313158.000000 s hg38.chr20_KI270870v1_alt 171232 37 + 183433 ACTGTGACCCCC----------GACTGCCTTTC-GCATGG-CCTGAGCG s panTro5.chr20 66506663 37 + 66533130 ACTGTGACCCCC----------GACTGCCTTTC-GCATGG-CCTGAGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173875 37 + 62195757 ACTGTGACCCCC----------GACTGCCTTTC-GCATGG-CCTGAGCG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560317 37 - 578057 ACTGTGACCCCC----------GACTGCCTTTC-GCATGG-CCTGAGCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081804 37 - 110113093 ACTGTGAGCCCC----------CACTGCCTTTC-ACGTGG-TCTGAGCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821526 37 - 92844088 ACTGTGACCCTT----------CATTGCCTTTC-ACGTGG-TCTGAGCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487197 37 + 96509753 ACTGTGACCCTT----------CATTGCCTTTC-ACGTGG-TCTGAGCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957169 37 - 16982598 ACTGTGACCCTT----------CATTGCCTTTC-ACGTGG-TCTGAGCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759131 37 - 3785965 ACTGTGACCCTT----------CATTGCCTTTC-ACGTGG-TCTGAGCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349109 37 - 90373283 ACCGTGACCCTT----------CATTGCCTTTC-ACGTGG-TCTGAGCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149864 37 - 179258 ACTGTGACCCTT----------CATTGCCTTTC-ACGTGG-TCTGAGCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619418 37 - 5823884 ACTGTGACCCTT----------CATTGCCTTTC-ACGTGG-TCTGAGCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176015 35 + 159171411 ACTGTGACCC------------CACTGCCTTTC-ATGAGG-TCTGAGCT i calJac3.chr5 N 0 C 0 s saiBol1.JH378156 16339752 35 + 16356641 ACTGTGACCC------------CACTGCCTTTC-ACAAGT-TCTGAGCC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1214170 35 + 1231380 ACTGCGAACC------------CACTGCCTTTC-ACAAGG-TCTGAGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2740153 35 + 11732439 ACTGTGACCC------------CACTGCCTTTC-ACAAGG-TCTGAGCT i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47655932 49 + 47698779 AGTCTGACTCTTTTTTGAACCCACCTGCCTTTCTGCCTGGCCCTGAACT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1915001 187 - 2029793 I e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56924979 195 + 57149010 I e dasNov3.JH569290 323379 5798 - 397369 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=15429.000000 s hg38.chr20_KI270870v1_alt 171269 2 + 183433 GC- s panTro5.chr20 66506700 2 + 66533130 GC- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173912 2 + 62195757 GC- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560354 2 - 578057 GC- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081841 2 - 110113093 GC- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821563 2 - 92844088 GC- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487234 2 + 96509753 GC- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957206 2 - 16982598 GC- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759168 2 - 3785965 GC- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349146 2 - 90373283 GC- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149901 2 - 179258 GC- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619455 2 - 5823884 GC- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176050 2 + 159171411 TC- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16339787 2 + 16356641 GC- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1214205 2 + 1231380 GC- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2740188 2 + 11732439 GC- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56925174 2 + 57149010 GC- i micMur3.chr18 I 195 C 0 s canFam3.chr24 47655981 2 + 47698779 -TT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1915001 187 - 2029793 I e mm10.chr2 181843528 506 + 182113224 I e dasNov3.JH569290 323379 5798 - 397369 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=338874.000000 s hg38.chr20_KI270870v1_alt 171271 30 + 183433 ATCCTGGGTCAGCCCTGTTCCTGTGCTTGC s panTro5.chr20 66506702 30 + 66533130 ATCCTGGGTCAGCCCTGTTCCTGTGCTTGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173914 30 + 62195757 ATCCTGGGTCAGCCCTGTTCCTGTGCTTGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560356 30 - 578057 ATCCCGGGTCAGCCCTGTTCCTGTGCTTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081843 30 - 110113093 ATCCTGGGTCAGCCACGTTCCTGTGCTTGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821565 30 - 92844088 ATCCTGGGTCAGCCATGTTCCTGTGCTTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487236 30 + 96509753 ATCCTGGGTCAGCCATGTTCCTGTGCTTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957208 30 - 16982598 ATCCTGGGTCAGCCATGTTCCTGTGCTTGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759170 30 - 3785965 ATCCTGGGTCAGCCATGTTCCTGTGCTTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349148 30 - 90373283 ATCCTGGGTCAGCCATGTTCCTGTGCTTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149903 30 - 179258 ATCCTGGGTCAGCCATGTTCCTGTGCTTGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619457 30 - 5823884 ATCCTGGGTCAGCCATGTTCCTGTGCTTGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176052 30 + 159171411 ATCTTGGGTCAGCCACGTTTCTGTGCTTGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16339789 30 + 16356641 ATCCTGGGTCAGCCATGTTCCTGTGCCTGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1214207 30 + 1231380 ATCCTGGGTCAGCCATGTTCCTGTGCTTGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2740190 6 + 11732439 ATCCTG------------------------ i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56925176 30 + 57149010 ATCCTGGGTCAGCCAGGTTCCTGTGCCGGT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1915188 30 - 2029793 ATCCTGGGTCAGCCACGTTCCTGTGCTTGT i proCoq1.NW_012150197v1 I 187 C 0 s canFam3.chr24 47655983 14 + 47698779 ATCCC-------------TTTTGTGCC--- i canFam3.chr24 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e dasNov3.JH569290 323379 5798 - 397369 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=923431.000000 s hg38.chr20_KI270870v1_alt 171301 76 + 183433 TCTGTGGGCTCCTCTCCCCTTTGCTCAGGGCTGTC---CTT-ACCTTTGTTTGTCATCAACCAGGGGAGAATACAGTAGC s panTro5.chr20 66506732 76 + 66533130 TCTGTGGGCTCCTCTGCCCTTTGCTCAGGGCTGTC---CTT-ACCTTTGTTTGTCATCAACCAGGGGAGAATACAGTAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62173944 76 + 62195757 TCTGTGGGCTCCTCTGCCCTTTGCTCAGGGCTGTC---CTT-ACCTTTGTTTGTCATCAACCAGGGGAGAATACAGTAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560386 76 - 578057 TCTGTGGGCTCCTCTCCCCTTTGCTCAGGGCTGTC---CTT-ACCTTTGTTTGTCATCAACCAGGGGAGAATACAGTAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081873 77 - 110113093 TCTGTGGGCTCCCCTCCCCTTTGCTCAGGGCTGTC---CTTAACCTTTGTTTGTCATCAACCAGGGTAGAATACAGTAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821595 76 - 92844088 TCTGTGGCCTCCTCTCCCCTTTGCTCAGGGCTGTC---CTT-ACCTTCGTTTGTCATCAACCAGGGGAGAATACAGTAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487266 76 + 96509753 TCTGTGGCCTCCTCTCCCCTTTGCTCAGGGCTGTC---CTT-ACCTTCGTTTGTCATCAACCAGGGGAGAATACAGTAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957238 76 - 16982598 TCTGTGGCCTCCTCTCCCCTTTGCTCAGGGCTGTC---CTT-ACCTTCGTTTGTCATCAACCAGGGGAGAATACAGTAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759200 76 - 3785965 TCTGTGGCCTCCTCTCCCCTTTGCTCAGGGCTGTC---CTT-ACCTTCGTTTGTCATCAACCAGGGGAGAATACAGTAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349178 76 - 90373283 TCTGTGGGCTCCTCTCCCCTTTGCTCAGGGCTGTC---CTT-ACCTTCGTTTGTCATCAACCAGGGGAGAATACAGTAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 149933 76 - 179258 TCTGTGGCCTCCTCTCCCCTTTGCTCAGGGCTGTC---CTT-ACCTTCGTTTGTCATGAACCAGGGGAGAATACAGTAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619487 76 - 5823884 TCTGTGGGCTCCTCTCCCCTTTGCTCAGGGCTGTC---CTT-GCCTTCGTTTGTCATCAACCAGGGGAGAATACAGTAGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176082 78 + 159171411 TCTGTGGGCTCCTCTCCACTTTGCTCAAGGCTGTCGTCCTT-ACCTTTGTTTGTCATCAG-CAGGGGAGAATACAGTAGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16339819 72 + 16356641 TCTGTGGGCTCCTCTCCGCTTTGCTGAAGGCTGTC--------CCTGCCTTTATCACCAACCAGGGGAGAATACAGTAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1214237 76 + 1231380 TCTGTGGGCTCCTCTCCGCTTTGCTCAAGGCTGTC---CCT-ACCTTTGTTTGTCATCAGCCAGGGGAGAATACAATAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2740196 74 + 11732439 --TGTGGGCTCCTCTCTGCTTTGCTCAAGGCTGTC---CTT-ACCTTTGTTTGTCATCAACCAGGGGAGAATACAGTAGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56925206 76 + 57149010 TCTGTGGGTTTCTCTCCCCTTTGCTCAGGGTTGTC---CTT-TTCTTTGTTTCTCATCAACCAGGAGAGGAAACAGTAGC i micMur3.chr18 C 0 I 123 s proCoq1.NW_012150197v1 1915218 76 - 2029793 TCTGTGGGTTTCTCTTCCCTTTGCTCAGGGTTGTC---CTT-TCCTTTGTTTCTTATCAGCCAGGAGAGGATACGGCAGC i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47655997 28 + 47698779 ----------------------GCACACGGCTGAC---CTG--------------------------AGAGTGCTATGA- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 329177 73 - 397369 TCCATGGGCTCCTCTCT--TTCACTCAGGGCTCTC---CTT-TCCTTAGTTTCCTCTCGA-AAAGGAAGGATGCAAGACC i dasNov3.JH569290 I 5798 C 0 e mm10.chr2 181843528 506 + 182113224 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=45304.000000 s hg38.chr20_KI270870v1_alt 171377 4 + 183433 TACT-- s panTro5.chr20 66506808 4 + 66533130 TACT-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174020 4 + 62195757 TACT-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560462 4 - 578057 TACT-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081950 4 - 110113093 TACT-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821671 4 - 92844088 TACT-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487342 4 + 96509753 TACT-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957314 4 - 16982598 TACT-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759276 4 - 3785965 TACT-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349254 4 - 90373283 TACT-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150009 4 - 179258 TACT-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619563 4 - 5823884 TACT-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176160 4 + 159171411 TACT-- i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16339891 4 + 16356641 TACT-- i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1214313 4 + 1231380 TACT-- i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2740270 4 + 11732439 TACT-- i aotNan1.NW_018500483v1 C 0 I 304 s proCoq1.NW_012150197v1 1915294 4 - 2029793 TACT-- i proCoq1.NW_012150197v1 C 0 I 1 s canFam3.chr24 47656025 4 + 47698779 GATT-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 329250 4 - 397369 --CTGT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925282 123 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=35766.000000 s hg38.chr20_KI270870v1_alt 171381 3 + 183433 AAG s panTro5.chr20 66506812 3 + 66533130 AAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174024 3 + 62195757 AAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560466 3 - 578057 AAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081954 3 - 110113093 AAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821675 3 - 92844088 AAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487346 3 + 96509753 AAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957318 3 - 16982598 AAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759280 3 - 3785965 AAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349258 3 - 90373283 AAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150013 3 - 179258 AAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619567 3 - 5823884 AAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176165 3 + 159171411 AAG i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16339896 3 + 16356641 AAG i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1214318 3 + 1231380 AAG i cebCap1.NW_016107870v1 I 1 C 0 s proCoq1.NW_012150197v1 1915299 3 - 2029793 AGG i proCoq1.NW_012150197v1 I 1 C 0 s canFam3.chr24 47656029 3 + 47698779 AGG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 329254 3 - 397369 CAG i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925282 123 + 57149010 I e aotNan1.NW_018500483v1 2740274 304 + 11732439 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=57915.000000 s hg38.chr20_KI270870v1_alt 171384 4 + 183433 AGAT s panTro5.chr20 66506815 4 + 66533130 AGAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174027 4 + 62195757 AGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560469 4 - 578057 AGAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081957 4 - 110113093 AGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821678 4 - 92844088 AGAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487349 4 + 96509753 AGAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957321 4 - 16982598 AGAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759283 4 - 3785965 AGAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349261 4 - 90373283 AGAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150016 4 - 179258 AGAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619570 4 - 5823884 AGAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176168 4 + 159171411 AGAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16339899 4 + 16356641 AGAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1214321 4 + 1231380 AGAT i cebCap1.NW_016107870v1 C 0 I 297 s aotNan1.NW_018500483v1 2740578 4 + 11732439 aGAT i aotNan1.NW_018500483v1 I 304 C 0 s proCoq1.NW_012150197v1 1915302 4 - 2029793 AGAT i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47656032 3 + 47698779 -GAG i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 329257 4 - 397369 AGAT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925282 123 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=31842.000000 s hg38.chr20_KI270870v1_alt 171388 2 + 183433 GG s panTro5.chr20 66506819 2 + 66533130 GG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174031 2 + 62195757 GG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560473 2 - 578057 GG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081961 2 - 110113093 GG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821682 2 - 92844088 GG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487353 2 + 96509753 GG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957325 2 - 16982598 GG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759287 2 - 3785965 GG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349265 2 - 90373283 GG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150020 2 - 179258 GG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619574 2 - 5823884 GG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176172 2 + 159171411 GG i calJac3.chr5 C 0 I 294 s saiBol1.JH378156 16339903 2 + 16356641 GG i saiBol1.JH378156 C 0 I 311 s cebCap1.NW_016107870v1 1214622 2 + 1231380 GG i cebCap1.NW_016107870v1 I 297 C 0 s aotNan1.NW_018500483v1 2740582 2 + 11732439 GA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1915306 2 - 2029793 GG i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47656036 2 + 47698779 GG i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 329261 2 - 397369 GG i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925282 123 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=143562.000000 s hg38.chr20_KI270870v1_alt 171390 12 + 183433 TGGCTCATAAGT s panTro5.chr20 66506821 12 + 66533130 TGGCTCATAAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174033 12 + 62195757 TGGCTCATAAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560475 12 - 578057 TGGCTCATAAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081963 12 - 110113093 TGACTCCTAAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821684 12 - 92844088 TGACTCATAAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487355 12 + 96509753 TGACTCATAAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957327 12 - 16982598 TGACTCATAAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759289 12 - 3785965 TGACTCATAAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349267 12 - 90373283 TGACTCATAAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150022 12 - 179258 TGACTCATAAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619576 12 - 5823884 TGACTCATAAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176468 12 + 159171411 TGACTCATAAGT i calJac3.chr5 I 294 C 0 s saiBol1.JH378156 16340216 12 + 16356641 TGACTTATAAGT i saiBol1.JH378156 I 311 C 0 s cebCap1.NW_016107870v1 1214624 12 + 1231380 TGACTCATAAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2740584 12 + 11732439 TGACTCATAAGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1915308 12 - 2029793 TAGCTCATGAGT i proCoq1.NW_012150197v1 C 0 I 63 s canFam3.chr24 47656038 3 + 47698779 ---------AGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 329263 12 - 397369 AGACCCATGAGA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925282 123 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=1241613.000000 s hg38.chr20_KI270870v1_alt 171402 155 + 183433 -CACCTACCTG--AAAAGTGC--TGGGTGATTCGGAAGCAGGGCAGACCTAGGAGC-GGCTCTGCCAGGGG-GGCCT-CGCTGCTCTGGTTTCA-TGCCGTGCTCCAGTGCTGAGTCCCAGGTGCCGTGTTCCTGACACCCCCCGGCCACCCTGTGTCCTCC-TC--------------------------------- s panTro5.chr20 66506833 155 + 66533130 -CACCTACCTG--AAAAGTGC--TGGGTGATTCGGAAGCAGGGCAGACCTAGGAGC-GGCTCTGCCAGGGG-GGCCT-CGCTGCTCTGGTTTCG-TGCCGTGCTCCAGTGCTGAGTCCCAGGTGCCGTGTTCCTGACACCCCCCGGCCACCCTGTGTCCTCC-TC--------------------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174045 155 + 62195757 -CACCTACCTG--AAAAGTGC--TGGGTGATTCGGAAGCAGGGCAGACCTAGGAGC-GGCTCTGCCAGGGG-GGCCT-CGCTGCTCTGGTTTCG-TGCCGTGCTCCAGTGCTGAGTCCCAGGTGCCGTGTTCCTGACACCCCCCGGCCACCCTGTGTCCTCC-TC--------------------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560487 154 - 578057 -CACCTACCTG--AAAAGTGC--TGGGTGATTCGGAAGCAGGGCAGAACTAGGAGC-GGCTCTGCCAGGGG-GGCCT-CGCTGCTCTGGTTTCA-TGCCGTGCTCCAGTGCTGAGTCCCAGGTGCCGTGTTCCTGACA-CCCCCGGCCACCCTGTGTCCTCC-TC--------------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110081975 155 - 110113093 -CACCTACCTG--AAAAGTGC--CGTGTGATTAGGAAGCAGGGCAGACCTAGGAGT-GGCTCTGCCAGGGG-GGCCT-TACTGCTCTGGCTTCA-TGCCGTGTTCCAGTGCTGAGTCCCAGGTGCCGTGTTCCTGACACCCCCCGGCCACCCTGTGTCCTCC-TT--------------------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821696 161 - 92844088 -CACCTACCTG-AAAAAATGCTGTGTGTGATTAGGAAGCAGGGCATACCTGGGAGT-GACTCTGCCAGGGGAGGCCT-TGCAGGTCTGGCTTCAGTGCCATGTTCCAGTGCCGTGTTCCAGGTGCCATGTTCCTGACACCCCCCCGCCACCCTGTGTCCTCCTTC--------------------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487367 159 + 96509753 -CACCTACCTG-AAAAAATGC--TGTGTGATTAGGAAGCAGGGCATACCTGGGAGT-GACTCTGCCAGGGGAGGCCT-TGCAGGTCTGGCTTCAGTGCCATGTTCCAGTGCCGTGTTCCAGGTGCCGTGTTCCTGACACCCCCCCGCCACCCTGTGTCCTCCTTC--------------------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957339 159 - 16982598 -CACCTACCTG-AAAAAATGC--TGTGTGATTAGGAAGCAGGGCATACCTGGGAGT-GACTCTGCCAGGGGAGGCCT-TGCAGGTCTGGCTTCAGTGCCATGTTCCAGTGCCGTGTTCCAGGTGCCGTGTTCCTGACACCCCCCCGCCACCCTGTGTCCTCCTTC--------------------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759301 132 - 3785965 -CACCTACCTG-AAAAAATGC--TGTGTGATTAGGAAGCAGGGCATACCTGGGAGT-GACTCTGCCAGGGGAGGCCT-TGCAGGTCTGGCTTCAGTGCCA---------------------------TGTTCCTGACACCCCCCAGCCATCCTGTGTCCTCCTTC--------------------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349279 151 - 90373283 -CACCTACCTG-AAAAAATGC--TGTGTGATTAGGAAGCAGGGCATACCTGGGGGT-AACTCTGCCAGGGGAGGCCT-TGCAGGCCTGGCCTCAGTGCCATGTTCCAGTGCTGTGTTCCAGGTGCCGTGTTCCTGACACCC--------CCCTGTGTCCTCCTTC--------------------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150034 159 - 179258 -CACCTACCTG-AAAAAATGC--TGTGTGATTAGGAAGCAGGGCATACCTGGGAGT-GACTCTGCCAGGGGAGGCCT-TGCAGGTCTGGCTTCAGTGCCATGTTCCAGTGCTGTGTTCCAGGTGCCGTGTTCGTGACACCCCCCAGCCACCCTGTGTCCTCCTTC--------------------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619588 159 - 5823884 -CACCTACCTG-AAAAAATGC--TGTGTGATTAGGAAGCAGGGCATACCTGGGAGT-GGCTCTGCCAGGGGAGGCCT-TGCAGGTCTGGCCTCAGTGCCATATTCCAGTGCTGTGTTCCAGGTGCTGTGTTCCTGACACCCCCCAGCCACCCTGTGTCCTCCTTC--------------------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176480 142 + 159171411 -AACCTACCTG--AAAACGGC--TGTGTGAGTAGGGAGCA-GGCATACCTGGGGGT----------------GGCCT-TGCAGATTTGGCTTCAGTGCCGTGTTCCAGTGCTGTGTCCCAGGTGCTGTGTTCCTAACACCTCCCGGCCACCCTGTGTCCTCTTTC--------------------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16340228 157 + 16356641 -AACCTACCTG--AAAACTGC--TGTGTGATCAGGAAGCAGGGCATACCTGGGAGT-GGCTTTCCCGGGGG-GGCCT-TGCAGATCTGGCTTCAGTGCCGTGTCCCAGGGCTGTGTCCCAGGTGCCGTGTTGCTAACACCTCCCGGCCACCCTGTGTCCTCCTTC--------------------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1214636 144 + 1231380 -AACCTACGTG--AAAACTGC--TGTGTGATCAGGAAGCAGGGCATACCTGGGAGT-GGCTTTCCCAGGGG-GGTCT-TGCAGATCTGGCTTCAGT-------------GCTGTGTCCCAGGTGCCGTGTGGCTAACACCTCCCGGCCACCCTGTGTCCTCCTTC--------------------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2740596 157 + 11732439 -GACCTACCTG--AAAACTGC--TGTGTGGTTAGGAAGCAGGGCATACCTGGGAGT-GGCTTTCCCAGGGG-GGCCT-TGCAGATCCGGCTTCAGTGCCATGTCCCAGTGCTGTGTCCCTGGTGCCGTGTTCCTAACACCTCCCGGCCACCCTGTGTCCTCCTTC--------------------------------- i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47656041 97 + 47698779 -GCCCTCCCTG--GAGGGTGG------------GGGGGCACGG-----------------------------GGGCT-TGT-GGTATGGCTTCAGTGCCATGGGCC--TCCTGTGTC-----------AGTTCTGACTCTTCCCA---------TGTGCTCCCTC--------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 329275 188 - 397369 CAGTACACCTGGGAAGGCTGC--C-----ATTAGGAAGTGGTGTGCACATGGGTGTCAGTTATGCCACGGG-GGCTTATGGCTGTCCTGCCTCAGCACACACTCTCAGTG-TGCCTTCTGCATACTCCTTCACCCTCACCCTCCAGCC-CCAGGGGATCTCCTTTTCCTTGGGATCCCCACAGAACTACTAAGGACAC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1915320 63 - 2029793 I e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925282 123 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=517648.000000 s hg38.chr20_KI270870v1_alt 171557 45 + 183433 CCCTGCTAGTCA-TCTTTGTATTAAG--CAGGTGGGTCGAGGTATTTG s panTro5.chr20 66506988 45 + 66533130 CCCTGCTAGTCA-TCTTTGTATTAAG--CAGGTGGGTCGAGGTATTTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174200 45 + 62195757 CCCTGCTAGTCA-TCTTTGTATTAAG--CAGGTGGGTCGAGGTATTTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560641 45 - 578057 CCCTGCTAGTCA-TCTTTGTATTAAG--CAGGTGGGCCGAGGTATTTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082130 45 - 110113093 CCCTGCTAGTCA-TCTTTTTATTAAG--CAGGTGGGTCAAGGTGTTTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92821857 45 - 92844088 CCCTGCTAGTCA-TCTTTTTATTAAG--CAGGTGGGTTGAGATATTTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487526 45 + 96509753 CCCTGCTAGTCA-TCTTTTTATTAAG--CAGGTGGGTTGAGATATTTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957498 45 - 16982598 CCCTGCTAGTCA-TCTTTTTATTAAG--CAGGTGGGTTGAGATATTTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759433 45 - 3785965 CCCTGCTAGTCA-TCTTTTTATTAAG--CAGGTGGGTTGAGATATTTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349430 45 - 90373283 CCCTGCTAGTCA-TCTTTTTATTAAG--CAGGTGGGTTGAGATATTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150193 45 - 179258 CCCTGCTAGTCA-TCTTCTTATTAAG--CAGGTGGGTTGAGATATTTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5619747 45 - 5823884 CCCTGCTAGTCA-TCTTTTTATTAAG--CAGGTGGGTTGAGATATTTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176622 46 + 159171411 CCCTGCTAGTCATTTTTTTTATTAAG--CAGGTGGGTGGAGGGATTTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16340385 45 + 16356641 CGCTGCTAGTCA-TCTTTTTATTAAG--CAGGTGGCTGGAGGGGTTTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1214780 45 + 1231380 CCCCGCTAGTCA-TCTTTTTATTAAG--CAGGTGGGTGGAGGGGTTTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2740753 45 + 11732439 CCCTGCTAGTCA-TCTTTTTATTAAG--CAGGTGGGTGGAGGGATTTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1915383 45 - 2029793 CCCTGCTAGTCA-CCTTTTTATTGAG--GGGGTAGGTCGAGGGATTTG i proCoq1.NW_012150197v1 I 63 C 0 s canFam3.chr24 47656138 42 + 47698779 CCCTCATAGTCC-TCTTTTTATTGA-----GGTGCGTTGGGGGCTATG i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 329463 44 - 397369 ACCTGTTAGTCA-CCATTGTATTGGGAACAGGTAAGTGTATGTAG--- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925282 123 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=1891332.000000 s hg38.chr20_KI270870v1_alt 171602 138 + 183433 TGTTACTACTGTTTGGTGTTAA-GCTTCTTGGGAATAGGAACCATATCTCATATCTGTTAC--------TAGAATTAACTGCTTATTAAGTGTTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTGGGAAGAATCAAGC s panTro5.chr20 66507033 138 + 66533130 TGTTACTACTGTTTGGTGTtaa-gcttcttgggaataggaaccatatctcatatctgttAT--------TAGAATTAACTGCTTATTAAGTGTTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTGGGAAAAATCAAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174245 138 + 62195757 TGTTACTACTGTTTGGTGTtaa-gcttcttgggaataggaaccatatctcatatctgttAT--------TAGAATTAACTGCTTATTAAGTGTTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTGGGAAAAATCAAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560686 138 - 578057 TGTTACTACTGTTTGGTGTtaa-gcttcttgggaataggaaccatatctcatatctgttAT--------TAGAATTAACTGCTTATTAAGTGTTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTGGGAAAAATCAAGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082175 138 - 110113093 TGTTACTACTGTTTGGTGTTAA-GCTTCTTGGGAATAGGAACCATATCTCATATCTGTTAC--------TAGAATTAACTGCTTAGTAAGTGTTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAGAATGAGTGGGAAAAATCAAGC i nomLeu3.chr13 C 0 I 1 s rheMac8.chr10 92821902 138 - 92844088 TGTTACTACTGTTTGGTGTTAA-GCTTCTTGGGAATAGGACACATACCTCATATCTGTTAT--------TAGAATTAACTGCTTATTAAGTGCTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTAGGAAAAATCAAGC i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96487571 138 + 96509753 TGTTACTACTGTTTGGTGTTAA-GCTTCTTGGGAATAGGACACATACCTCATATCTGTTAT--------TAGAATTAACTGCTTATTAAGTGCTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTAGGAAAAATCAAGC i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16957543 138 - 16982598 TGTTACTACTGTTTGGTGTTAA-GCTTCTTGGGAATAGGACACATACCTCATATCTGTTAT--------TAGAATTAACTGCTTATTAAGTGCTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTAGGAAAAATCAAGC i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3759478 138 - 3785965 TGTTACTACTGTTTGGTGTTAA-GCTTCTTGGGAATAGGACACATATCTCATATCTGTTAT--------TAGAATTAACTGCTTATTAAGTGCTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTAGGAAAAATCAAGC i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90349475 138 - 90373283 TGTTACTACTGTTTGGTGTTAA-GCTTCTTGGGAATAGGACACATATCTCATATCTGTTAT--------TAGAATTAACTGCTTATTAAGTGCTTGATGGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTAGGAAAAATCAAGC i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 150238 138 - 179258 TGTTACTACTGTTTGGTGTTAA-GCTTCTTGGGAATAGGACACATATCTCGTATCTGTTAT--------TAGAATTAACTGCTTATTAAGTGCTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTAGGAAAAATCAAGC i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5619792 138 - 5823884 TGTTACTACTGTTTGGTGTTAA-GCTTCTTGGGAATAGGACACATATCTCGTATCTGTTAT--------TAGAATTAACTGCTTATTAAGTGCTTGATAGTGAAGGTGAGGGGTCAGTGAAAATAAGATGAGTAGGAAAAATCAAGC i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chr5 58176668 133 + 159171411 TGTTACTATTATTTGGTGTTAA-GCTTCTTGGGAATAGGAACTGTATCTCATATCTGTTAT--------TAGAATTAACTGCTTATTAAGTATTTGATAGTGATGGTGAGGGGTCAGTGAAA-----ATGAGTGGGAAAAATCAAGC i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16340430 135 + 16356641 TGTTAC---TATTTGGTGTtaa-gcttcttgggaataggaaccgtatctcatatctGTTAT--------TAGAATTAACTGCTTATTAAGTATTTGATAGTGATGGTGAGGGGTCAGTGAAAATAAGATGAGTGTGAAAAATCAAGC i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1214825 138 + 1231380 TGTTACTATTATTTGGTGTTAA-GCCTCTTGGGAATAGGAACCGTATCTCATATTTGTTAT--------TAGAATTAACTGCTTATTAAGTATTTGATAATGATGGTGAGGGGTCAGTGAAAATAAGATGAGTGTGAAAAATCAAGC i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2740798 138 + 11732439 CGTTACTATTGTTTGGTGTtaa-gcttcttgggaataggaaccgtatctcatatctgttAT--------TAGAATTAACTGCTTATTAAGTATTTGATAGTGATGGTGAGAGGTCAGTGAAAATAAGATGAGTGGGAAAAATCAAGC i aotNan1.NW_018500483v1 C 0 I 1 s micMur3.chr18 56925405 137 + 57149010 TGTTATTACTATTTCGTATtaa-gcctcttgggaataggaaccatgccccatatctcttAT--------TAGAATTAACTGCATAATAAGT-TTTGATAGCGAAGGTGAGGGGTTAATGAAAATATGATGAATGGAAAAAAACAAGC i micMur3.chr18 I 123 I 135 s proCoq1.NW_012150197v1 1915428 136 - 2029793 --TTATTACTGTGTGGTATtaa-gcttcttgggaataggaaccatgtcccatatgtgttAT--------TAGAATTAACTATATAATAAGTGTTCGATAGAGAAGGTGAGGGGTTAACGAAAATATGATGAATGGGAAAAAACAAGC i proCoq1.NW_012150197v1 C 0 I 1 s canFam3.chr24 47656182 131 + 47698779 TTTTGCT-CTATTTGGTGTTAACGCTTTTTGGGGATAGGAGCTGTGT----TCTCTATTAT--------TAGAATTAACTGCTTAATAGGTG-TTGATAA--AGGGTGAGGGGCTAATGAAACTATGATGACTGAGAAAGTAAAGGT i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 329507 134 - 397369 TATTACT-CAGTTTGGTTTTAG-GTGTC-----------AAACATTTCGCATTTCTACTGTATCTATTATAGAATAAATGACCTAATAAGTGTTTGATAGTGAAGATGAGGGGGTAATGAAAACATTATGCATGGAAACAAGAAAGC i dasNov3.JH569290 C 0 I 1 e mm10.chr2 181843528 506 + 182113224 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=1004510.000000 s hg38.chr20_KI270870v1_alt 171740 90 + 183433 GCTATTTTTGGTCTC------------------TGGCA-GAGTC--GGGAATTGAAGTC--GGAGTTGTCAGAAGGTCTTGACGTTCAGAGTAATTCAGGATTTGATGTTGTA s panTro5.chr20 66507171 90 + 66533130 GCTATTTTTGGTCTC------------------TGGCA-GAGTC--GGGAATTGAAGTC--GGAGTTGTCAGAAGGTCTTGACGTTCAGAGTAATTCAGGATTTGATGTTGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174383 90 + 62195757 GCTATTTTTGGTCTC------------------TGGCA-GAGTC--GGGAATTGAAGTC--GGAGTTGTCAGAAGGTCTTGACGTTCAGAGTAATTCAGGATTTGATGTTGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560824 92 - 578057 GCTATTTTTGGTCTC------------------TGGCA-GAGTC--GGGAATTGAAGTCAGGGAGTTGTCAGAAGGTCTTGACGTTCAGAGTAATTCAGGATTTGGTGTTGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082314 100 - 110113093 GCTATTTTTGGTCTC--TGGCACA--------GTGGCA-GAGTC--GGGCATTGAAGTCAGGGAGTTGTCAGAAGGTCTTGACGTTCAGAGTAATTCAGGATTTGATGTTGTA i nomLeu3.chr13 I 1 C 0 s rheMac8.chr10 92822041 100 - 92844088 GCTATTTTTGGTCTC--TGGCACA--------GTGGCA-GAGTC--GGGAATTGAAGTCGGGGAGTTGTCAGAAGGTCTTGACATTCGGAGTAATTCAGGATTTCATGTTGTA i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96487710 100 + 96509753 GCTATTTTTGGTCTC--TGGCACA--------GTGGCA-GAGTC--GGGAATTGAAGTCGGGGAGTTGTCAGAAGGTCTTGACATTCGGAGTAATTCAGGATTTCATGTTGTA i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16957682 100 - 16982598 GCTATTTTTGGTCTC--TGGCACA--------GTGTCA-GAGTC--GGGAATTGAAGTCGGGGAGTTGTCAGAAGGTCTTGACATTCGGAGTAATTCAGGATTTCATGTTGTA i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3759617 100 - 3785965 GCTATTTTTGGTCTC--TGGCACA--------GTGGCA-GAGTC--GGGAATTGAAGTCGGGGAGTTGTCAGAAGGTCTTGACATTCGGAATAATTTAGGATTTCATGTTGTA i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90349614 100 - 90373283 GCTGTTTTTGGTCTC--TGGCACA--------GTGGCA-GAGCC--GGGAATTGAAGTCGGGGAGTTGTCAGAAGGTCTTGACGTTCGGAGTAATTCAGGATTTCGTGTTGTA i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 150377 100 - 179258 GCTATTTTTGGTCTC--TGGCACA--------GTGGCA-GAGTC--GGGAATTGAAGTCGGGGAGTTGTCAGAAGGTCTTGACATTGGGAGTAATTCAGGATTTCATGTTGTA i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5619931 100 - 5823884 GCTATTTTTGGTCTC--TGGCACA--------GTGGCA-GAGTC--GGGAATTGAAGTCGGGGAGTTGTCAGAAGGTGTTAACGTTCGGAGTAATTCAGGATTTCATGTTGTA i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chr5 58176802 100 + 159171411 GCTTTTTTCGGTCTC--TGGCATG--------GTGACA-GAGTCATGGGAATTGAAATC--AGAGTTGGCAGAAGGTCTTGAAGTTCAGAGTAATTCAGGATATGAGGTTGTA i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16340566 102 + 16356641 GCTTTTTTTGGTCTC--TGGCATA--------GTGACA-GAGTCATGGGAATTGAAGTCAGAGAGTTGGCAGAAGGTCTTCAAGTTCAGAGTAATTCAGGATTTGATGTTGTA i saiBol1.JH378156 I 1 I 200 s cebCap1.NW_016107870v1 1214964 102 + 1231380 GCTTTTTTTGGTCTC--TGGCATA--------GTGACA-GAGTCATGGGAATTGAAGTCAGAGAGTTGGCAGAAGGTCTTGAAGTTCAGAGTAATTCAGGATTTGATGTTGTA i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2740937 102 + 11732439 GCTTTTTTTGGCCTC--TGGCATA--------GTGACA-GAGTCATGGGAATTGAAGTCAGAGAGTTGGCAGAAGGTCTTGAAGGTCAGAGTAATTCAGGATTTGATGTTGTA i aotNan1.NW_018500483v1 I 1 C 0 s proCoq1.NW_012150197v1 1915565 110 - 2029793 GGTTTTCTTGGTCTC--TGGCACAATGCTCCCATGCTA-GAGTAATGGGAATTGAAGTTAGTGAGTTGGCAGAAGGTCTTGAAGTTTGGAATAATTTAGGATTTGGTGTGATA i proCoq1.NW_012150197v1 I 1 C 0 s canFam3.chr24 47656313 84 + 47698779 GCTGCT-----------------A--------GCTAGA-GAGCAGTGGGGATGAAAGTCAGGGACTTGACAGAGGGTCTTGAAGTT--GGATAATTT-GGATTTGATGTTGTA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 329642 111 - 397369 GATTTCTGTAGTCTTGTCAGGACAATGATCCCATGCCAGGAGTCATGGGACTAGAAGTTGGTGAATTGGTAGAGGGTCTTGAAGTTCTAAAGAAGTTGGGACTAGTGTTTA-- i dasNov3.JH569290 I 1 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925542 135 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=289440.000000 s hg38.chr20_KI270870v1_alt 171830 24 + 183433 AACAGTGAAAAGGGGAACTCTCAG s panTro5.chr20 66507261 24 + 66533130 AACAGTGAAAAGAGGAACTCTCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174473 24 + 62195757 AACAGTGAAAAGGGGAACTCTCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560916 24 - 578057 AATAGTGAAAAGGGGAACTCTCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082414 24 - 110113093 GATAGTGAAAAGTGGAACTCTCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822141 24 - 92844088 AATAGTGAAAAGTTGAACTCTCAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487810 24 + 96509753 AATAGTGAAAAGTTGAACTCTCAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957782 24 - 16982598 AATAGTGAAAAGTTGAACTCTCAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759717 24 - 3785965 AATAGTGAAAAGTTGAACTCTCAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349714 24 - 90373283 AATAGTGAAAAGTTGAACTCTCAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150477 24 - 179258 AATAGTGAAAAGTTGAACTCTCAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620031 24 - 5823884 AATAGTGAAAAGTTGAACTCTCAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176902 24 + 159171411 AATAGTGAAAAGATGGACTGTCAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16340868 24 + 16356641 AATAGTGAAAAGATGGACTCTCAG i saiBol1.JH378156 I 200 C 0 s cebCap1.NW_016107870v1 1215066 24 + 1231380 AATAGTGAAAAGATGGACTCTCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741039 24 + 11732439 AGTAGTGAAAAGATGGACTCTCAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1915675 24 - 2029793 AATAGTGAAAATATGACCTCTTAA i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47656397 24 + 47698779 AATAGTGAAAATGTGACTTCTCAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 329753 24 - 397369 ATTAGTGAAGATGTGGCTTCTCAA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925542 135 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=1881301.000000 s hg38.chr20_KI270870v1_alt 171854 139 + 183433 GTAGGG-TGTATTTTGACGAGGTAATGTTTTAGCAGCAGCTCTGTGTATGAAAT-ACGTGGAGAG--AAAAGAGCAGCAGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCTTGGCCTGGGCTGGTGGCTGTTGTACTAGGA s panTro5.chr20 66507285 139 + 66533130 GTAGGG-TGTATTTTGACGAGGTAATGTTTTAGCAGCAGCTCTGTGTATGAAAT-ACGTGGAGAG--AAAAGAGCAGCAGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCTTGGCCTGGGCTGGTGGCTGTTGTACTAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174497 139 + 62195757 GTAGGG-TGTATTTTGACGAGGTAATGTTTTAGCAGCAGCTCTGTGTATGAAAT-ACGTGGAGAG--AAAAGAGCAGCAGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCTTGGCCTGGGCTGGTGGCTGTTGTACTAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 560940 139 - 578057 GTAGGG-TGTATTTTGACGAGGTAATGTTTTAGCAGCAGCTCTGTGTATGAAAT-ACGTTGAGAG--AAAAGAGCAGCAGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCTTGGCCTGGGCTGGTGGCTGTTGTACTAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082438 139 - 110113093 GTAGGG-TGTATTTTGACGAGGTAATGTTTTAGCCGCAGCTCTGTGTATGAAAT-ATGTTGAGAG--AAAAGAGCAGCAGGTACAGTTGTCCAAATGGGGAGCAGGGAAGCCTTGGCCTGGGCTGGTGGCTGTTGTACTAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822165 139 - 92844088 GTAGGG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTGTGAAAT-CTGTTGAGAG--AGAAGAGCAGCGGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCCTTTCCTGGGCTGGTAACTCTTGTCCTAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487834 139 + 96509753 GTAGGG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTGTGAAAT-CTGTTGAGAG--AGAAGAGCAGCGGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCCTTTCCTGGGCTGGTAACTCTTGTCCTAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957806 139 - 16982598 GTAGGG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTGTGAAAT-CTGTTGAGAG--AGAAGAGCAGCGGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCCTTTCCTGGGCTGGTAACTCTTGTCCTAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759741 139 - 3785965 GTAGGG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTGTGAAAT-CTGTTGAGAG--AGAAGAGCAGCAGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCTTTTCCTGGGCTGGTAACTCTTGTCCTAGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349738 139 - 90373283 GTAGGG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTGTGAAAT-CTATTGAGAG--AGAAGAGCAGCGGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCTTTTCCTGGGCTGGTAACTCCTGTCCTAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150501 139 - 179258 GTAGGG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTGTGAAAT-CTGTTGAGAG--AGAAGAGCAGCAGGTACAGTTGTCCAAATGGGGGCCAGGGAAGCCTTTTCCTGGGCTGGTAACTCTTGTCCTAGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620055 139 - 5823884 GTGGGG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTGCGAAAT-CTGTTGAGAG--AGAAGAGCAGCAGGTACAGTTGTCCAGATGGGGGCCAGGGAAGCCTTGGCCTGGGCTGGTGACTCTTGTACTAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58176926 139 + 159171411 GTAGGG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTATGAAAT-ATGGTGAGAG--AAAAGAGCAGCAGGTACAGCTGTCCAAATGGGGGCCAGAGAAGCCTTGTCCTGGGCTGGTGGCTGTTGTACTAGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16340892 138 + 16356641 GTAGCG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTATG-AAT-ACGGTGAGAG--AAAAGAGCAGCAGGTACAGCTGTCCAAACGGGGGCTGGAGAAGCCTTGTCCTGGGCTGACGGCTGTTGTGCCAGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215090 139 + 1231380 GTAGGG-TGTATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTATGAAAT-ACGGTGAGAG--AAAAGAGCAGCAGGTACAGCTGTCCAAACGGGAGCCAGAGAAGCCTTGTCCTGGGCGGGTGGCTGTTGTACCAGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741063 139 + 11732439 GTAGGG-TAGATTTTGATGAGGTAATGTTTTAGCAGCAGCTCTGTGTGTGAAAT-ACGGTGAGAG--AAAAGAGCAGCAGGTACAGCTGTCCAGACGGGGGCCAGAGAAGCCTTGTCCTGGGCCGGTGGCTGTTGTACTAGGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56925677 138 + 57149010 GTAGGA-TGTGTTTTGATGAGAGGATGTTTTAGCAGCAGCTCTGTGTACGAAAG-ATGTTGAGAG--AAAA-AGCAGCAGGTACAGTTGTCCAAAAGGGGGCCAGGGAAGCCTTGGCATGGCGTGGTGGCTGTTGTACTAGGA i micMur3.chr18 I 135 I 545 s proCoq1.NW_012150197v1 1915699 139 - 2029793 GCAGGA-TGTGTTTTGATGAGGGGATGTTTTAGCAGCAGCTCTGTGTATCAAAG-ATGTTGAGAG--AAAATAGCAGCAGGTACAGTTGTCCAAAAGGGGGCCAGGGAAGCCTTGGCATGGGGTGGTGGCTGTTGTACTAGGA i proCoq1.NW_012150197v1 C 0 I 31 s canFam3.chr24 47656421 138 + 47698779 GTAGGG-TGTGTTTTAATCAGAGAATGTTTTAGCAGCAGGTGTGCCTTTGACAG-ATGTTGAGGG--AAGAGAGCCCCAGATG-AGTTGTCCAGGTGGTGGAGAGGGAAGCCTTGGCCTGGGGTGGCTGCTGTGCTGTCAGGG i canFam3.chr24 C 0 I 8 s dasNov3.JH569290 329777 129 - 397369 GCAGGGATTTATCTGGTTGGATGAATGTTTCAGCAGCAGGTCAGTGTGTGAAAGAATGCTGAGAGACAAAAGAGCTGCAGGTGCAGTTGTCAGAACATGAGGT--GGAAGCCTGGGC------------CTCTTGTACTTAGT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=114861.000000 s hg38.chr20_KI270870v1_alt 171993 16 + 183433 GGGCCCACACGG-----TGCA s panTro5.chr20 66507424 16 + 66533130 GGGCCCACACGG-----TGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174636 16 + 62195757 GGGCCCACACGG-----TGCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561079 16 - 578057 GGGCCTACACGG-----TGCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082577 16 - 110113093 GGGCCCACATGG-----TGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822304 16 - 92844088 GGGCCCGCATGG-----TGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487973 16 + 96509753 GGGCCCGCATGG-----TGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957945 16 - 16982598 GGGCCCGCATGG-----TGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759880 16 - 3785965 GGGCCTGCATGG-----TGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349877 16 - 90373283 GGGCCCGCATGG-----TGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150640 16 - 179258 GGGCCCGCATGG-----TGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620194 16 - 5823884 GGGCCCGCATGG-----TGCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177065 21 + 159171411 AGACCCACACAGCAAGATGAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341030 21 + 16356641 AGACCCACGCGGCCAGATGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215229 21 + 1231380 AGACCCATGCGGCAAGATGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741202 21 + 11732439 AGACCCACACGGCAAGGTGCA i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47656567 21 + 47698779 AAGCCCAAGTGGCAAAATGTA i canFam3.chr24 I 8 C 0 s dasNov3.JH569290 329906 12 - 397369 AGGACAGAATGA--------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1915838 31 - 2029793 I e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925815 545 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=272417.000000 s hg38.chr20_KI270870v1_alt 172009 23 + 183433 AAGGTG-TGGGATGCACAGAAGGT s panTro5.chr20 66507440 23 + 66533130 AAGGTG-TGGGATGCACAGAAGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174652 23 + 62195757 AAGGTG-TGGGATGCACAGAAGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561095 23 - 578057 AAGGTG-TGGGATGCACAGAAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082593 23 - 110113093 AAGGTG-TGGGATGCACAGAAAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822320 23 - 92844088 AAGGTG-TGGGAGGCACAGAAGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96487989 23 + 96509753 AAGGTG-TGGGAGGCACAGAAGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957961 22 - 16982598 AAGGTG-TGGGAGGCAC-GAAGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759896 23 - 3785965 AAGGTG-TGGGAGGCATAGAAGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349893 23 - 90373283 GAGGTG-TGGGATGCACAGAAGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150656 23 - 179258 AAGGTG-TGGGAGGCACAGAAGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620210 23 - 5823884 CAGGTG-TGGGATGCACAGAAGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177086 23 + 159171411 AAAGTG-TGGGATAAACAGAAGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341051 23 + 16356641 GAGGTG-TGGGATGCACAGAAGGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215250 23 + 1231380 AAGGTG-TGGGATGCACAGAAGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741223 23 + 11732439 GAGGTG-TGGGATGCACAGAAGGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1915869 23 - 2029793 AAGGTG-TGAGATGCACGGAAGGT i proCoq1.NW_012150197v1 I 31 C 0 s canFam3.chr24 47656588 22 + 47698779 AAGATA-CAGAA-GCACAGATGGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 329918 24 - 397369 AAGCTGCTGGGGTGGACAAACAGC i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925815 545 + 57149010 I e otoGar3.GL873542 22906406 316 + 22939663 I a score=2075752.000000 s hg38.chr20_KI270870v1_alt 172032 201 + 183433 TGCCCATTTCTTAGCATTTCTGTTAGATT------GTAGGGTCCAGTGCTACATGATCACTGTAGTA---GTATATCTGTCTACCAAG-TAAAGTCCTACGTGCCTTG-TGAtttttacatgtagat-t-taaaaagttgacgtgtaactt-acccatagtaaa-tgaacaagtgtgaagtgtgaattctggtggacttttacatatgcatccacc s panTro5.chr20 66507463 198 + 66533130 TGCCCATTTCTCAGCATTTCTGTTAGATT------GTAGGGTCCAGTGCTACATGATCACT---GTA---GTATATCTGTCTACCAAG-TAAAGTCCTACGTGCCTTG-TGCTTTTTACATGTAGAT-T-TAAAAagttgacgtgtaactt-acccatagtaaa-tgaacaagtgtgaagtgtgaattctggtggacttttacatatgcatccacc i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174675 198 + 62195757 TGCCCATTTCTCAGCATTTCTGTTAGATT------GTAGGGTCCAGTGCTACATGATCACT---GTA---GTATATCTGTCTACCAAG-TAAAGTCCTACGTGCCTTG-TGCTTTTTACATGTAGAT-T-TAAAAagttgacgtgtaactt-acccatagtaaa-tgaacaagtgtgaagtgtgaattctggtggaattttacatatgcatccacc i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561118 198 - 578057 TGCCCATTTCTCAGCATTTCTGTTAGATT------GTAGGGTCCAGTGCTACATGATCACT---GTA---GTATATCTGTCTACCAAG-TAAAGTCCTACGTGCCTTG-TGATTTTTACATGTAGAT-T-TAAAAagttgacgtgtaactt-acccatagtaaa-tgaacaggtgtgaagtgtgaattctggtggacttttatgtatgcatccacc i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082616 177 - 110113093 TGCCCATTTCTCAGCATTTCTGTTAGATT------GTAGAGTCCAGTGCTACATGATCACT---GTA---GTATATCTGTCTACCAAG-TAAAGTCCTACATGCCCTG-TGATTTTTACATGTAGCT-T-TAAAAAGTTGACCTGTAACTT-ACCCATAGTAAA-TGAACAAGTACGAAGTGTGAATTCTGGTGG--------------------- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822343 198 - 92844088 TGCTCGTTTCTCAGCATTTCTGTGAGATT------GTAGGGTCCAGTGCTGCATGATCACT---GTG---GTAGATGTGTCTACTAAG-TAAAGTCCTACGTGCCCTATTGATTTTTACATGTAGAC-T-TAAAAagttgacgtgtaactt-acccat-gtaaa-tgaacaagtgtgaagtgtgaattctgatggacttttacatgtgcatccacc i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96488012 198 + 96509753 TGCTCGTTTCTCAGCATTTCTGTGAGATT------GTAGGGTCCAGTGCTGCATGATCACT---GTG---GTAGATGCGTCTACTAAG-TAAAGTCCTACGTGCCCTATTGATTTTTACATGTAGAC-T-TAAAAagttgacgtgtaactt-acccat-gtaaa-tgaacaagtgtgaagtgtgaattctgatggacttttacatgtgcatccacc i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16957983 198 - 16982598 TGCTCGTTTCTCAGCATTTCTGTGAGATT------GTAGGGTCCAGTGCTGCATGATCACT---GTG---GTAGATGCGTCTACTAAG-TAAAGTCCTACGTGCCCTATTGATTTTTACATGTAGAC-T-TAAAAagttgacgtgtaactt-acccat-gtaaa-tgaacaagtgtgaagtgtgaattctgatggacttttacatgtgcatccacc i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3759919 198 - 3785965 TGCTCGTTTCTCAGCATTTCTGTGAGATT------GTAGGGTCCAGTGCTGCATGATCACT---GTG---GTAGATGCGTCTACTAAG-TAAAGTCCTACGTGCCCTATTGATTTTTACATGTAGAC-T-TAAAAAGTGgacgtgtaactt-acccat-gtaaa-tgaacaagtgtgaagtgtgaattctgatggacttttacatgtgcatccacc i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90349916 197 - 90373283 TGCTCGTTTCTCAGCATTTCTGTGAGATT------GTAGGGTCCTGTGCTGCATGATCACT---GTG---ATGGATCCGTCTACTAAG-TGAAGTCCTACGTGCCCTGTTGATTTTTACATGTAGAC-T-T-AAAagttgacgtgtaactt-acccat-gtgaa-tgaacaagtgtgaagtgtgaattctggcggacttttacatgtgcgtccacc i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 150679 198 - 179258 TGCTCGTTTCTCAGCATTTCTGTGAGATT------GTAGAGTCCAGTGCTGCATGATCACT---GTG---GTAGATGCGTCTACTAAG-TAAAGTCCTACGTGCCCTATTGATTTTTACATGTAGAC-T-TAAAAagttgacgtgtaactt-acccat-gtaaa-tgaacaagtgtgaagtgtgaattctgatggacttttacatgtgcatccacc i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620233 199 - 5823884 TGCTCGTTTCTCAGCATTTCTGTGAGATC------GTAGGGTCCAGTACCACGTGATCACC---GTG---GTAGATCCGTCTACTAAG-TCAAGTCCTACGTGCCCTATTGATTTTTACATGTAGAC-T-GAAAAagttgacgtgtaactt-atccatagtaaa-tgaaaaagtgtgaagtgtgaattctggtggacttttacatgtgcatccacc i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177109 180 + 159171411 TGCTCACTTACCAGCATTTCTGCTAGATT------GTA----------------GACCACT---GTG---GTATATCTGTCTACTACA-TAAAGTCCTACATGCCCTCTCGATTTTTACATGTAGA--T-TAAAAaattaatgtgtaactt-acctatagt--a-tgaataagcataaagtgtgaattctggtggacttttgcatatgcatccaac i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341074 183 + 16356641 TGCTCGCTTATCAGCGTTTCTGCTAGATT------GTA----------------GATCACT---GTG---ATACATCTGTCTACTACA-TAAAGTCCTACATGCCCTGTCGATTTTTACATATAGAT-T-TAAGAaattaatgtgtcactt-acctatagtaaa-tgaataagcgtgaagcgtgaattctggtggacttttacgtatgcatccatc i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215273 168 + 1231380 TGTTCATGTATCAGCATTTCTGCTAGATT------ATA----------------GATCACT---GTG---GTGTATCTGTCTACTACA-TGAAGTCCTGCATGCCCTGTCAATTTTTACATGTAGAT-T-TAAAAAATTAAAG----------------GTaaa-tgaataagcgtgaagtgtgaattctggtggacttttacgtatgcatccatc i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741246 183 + 11732439 TGCTCATTCATCAGCGTTTGTGCTGGACT------GTA----------------GATCACT---GTG---GTGTATCTGTCTACTACA-TAAAGTCCTGCATGCCCTGTCGATTTTTACATGTAGAT-T-AAAAAaattgatgtgtaactt-agctatagtaaa-tgaataagcgtgaagtgtgaattctggtggacttttacatatgcatccacc i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1915892 200 - 2029793 TGCTTATCTCCCAGTATTTCTGTTGGATT------GTAGGATTGAGTGCTACACTATGACT---GTA---GTATTTATGTCTACCAAA-TATTTTCCTACGTGACCTGTTGATTGTCACATGCAGAT-TGTAAAAaattgaagtataactt-agctgtagtaaa-tgaacaagcgtgaagcatgaagcttggtgagtttttacatatgcatccacc i proCoq1.NW_012150197v1 C 0 I 281 s otoGar3.GL873542 22906722 197 + 22939663 TACCTGCTTACCAGTATTTCTGTGGGATT------GCAGGGCTGAGTGCTACATTAGTACT---GTGTATGTTTGTTTGTTTACTAAG-TA------GACATGCTCTGCTGATTATCACATGCATAA-ttttaaaggttgaggaataacat-agctatagtaaa-tgaacaaatgtgaagtgtgaagcttggtgagttttcacacatatatctgcc i otoGar3.GL873542 I 316 C 0 s canFam3.chr24 47656610 200 + 47698779 TGCTTATTTTCTAGTATTTCTGTTGGACT------GTAGGGTTAGGTGCTGCACTGTGACT---TCA---GTGTATCTGTCTAGTAAA-TA-AGTTTTACTTGCCCTGTTGATTTTTACATGGGGATAT-TTAAAAATGGCTgtgtaagttaatctgcagtaaa-tgaacaagtgtgaggtgtggagcttggtgaattgttctgtaagtattcacc i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 329942 197 - 397369 TGCTTATTGACTATTATTTTTCTTGGGCTAGTTTAGTAGGG---------AAAATAGCATT----TA---GGATGGATGTCTTATAAACTGGAGCTCTACAGGTCATGTTTACTTACTCATGCAGAT-T-TTAACaattgaggaataactt-aagtgtggtaaattgcacaactcttgggtgcagagcttaatgagtttttgcagttttatgcgcc i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925815 545 + 57149010 I a score=2010486.000000 s hg38.chr20_KI270870v1_alt 172233 205 + 183433 gccatataaactccagccacagcaagatgcagagttgaatcagcacccc-aaaaggctcccatgcc-ccctcctcctcctagaaagttcaccagtgttgca----tcttccagaaaggtgatgaccgttttg-cc-tttgtcggcaaagatgaattttgcccgatttttaccttcatgtaagtggattcCCGCAACAGAGAGACCCATTTAAG s panTro5.chr20 66507661 205 + 66533130 gccatataaactccacccacagcaaaatgcagagttgaatcagcacccc-aaaaggctcccatgcc-ccctcctcctcctagaaagttcaccagtgttgca----tcttccagaaaggtgatgaccgttttg-cc-tttgtcggcaaagatgaattttgcccgatttttaccttcgtgtaagtggattcCCGCAACAGAGAGACCCATTTAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62174873 205 + 62195757 gccatataaactccacccacagcaagatgcagagttgaatcagcacccc-aaaaggctcccatgcc-ccctcctcctcctagaaagttcaccagtgttgca----tcttccagaaaggtgatgaccgttttg-cc-tttgttggcaaagatgaattttgcccgatttttaccttcgtgtaagtggattcCCGCAACAGAGAGACCCATTTAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561316 204 - 578057 gccatataaactccacccacagcaagatgcagagttgaatcagcacccc-aaaaggctcccatgcc-ccctcctccttctagaaagttcaccagtgttgca----tcttccagaaaggtgatgaccgttttg-cc-tttgtcggcaaagatgaattttgcccga-ttttaccttcgtgtaagtggattcCCGCAACAGAGAGACCCATTTAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082793 196 - 110113093 ---------ACTCCACCCACAGCAAGATGCAGAGTTGAATCAGCACCCC-AAAAGGCTCCCATGCC-CCCTCCTCCTTCTAGAAAGTTCACCAGTGTTGCA----TGTTCCAGAAAGGTGATGACTGTTTTG-CC-TTTGTCGGCACAGATGAATTTTGCCCAATTTTTACCTTCGTGTAAGTGGATTCCCACAACAGAGAGACTCATCTAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822541 205 - 92844088 tccatataaactccacccggagcaagatacagagtagaatcagcacccc-agaaggctcccatgcc-ccctcctccttctagaaaggtccccagtgttgca----ccttccagaaaggtgatgacggttttg-cc-tttgtcagtatagatgaattttgcctgatttttaccttcgtgtaagtggattcccacaACAGAGAGACTCAACAGAG i rheMac8.chr10 C 0 I 24 s macFas5.chr10 96488210 205 + 96509753 tccatataaactccacccggagcaagatacagagtagaatcagcacccc-agaaggctcccatgcc-ccctcctccttctagaaaggtccccaatgttgca----ccttccagaaaggtgatgacggttttg-cc-tttgtcagtatagatgaattttgcctgatttttaccttcgtgtaagtggattcccacaACAGAGAGACTCAACAGAG i macFas5.chr10 C 0 I 24 s macNem1.NW_012014244v1 16958181 205 - 16982598 tccatataaactccacccggagcaagatacagagtagaatcagcacccc-agaaggctcccatgcc-ccctcctccttctagaaaggtccccaatgttgca----ccttccagaaaggtgatgacggttttg-cc-tttgtcagtatagatgaattttgcctgatttttaccttcgtgtaagtggattcccacaACAGAGAGACTCAACAGAG i macNem1.NW_012014244v1 C 0 I 24 s cerAty1.NW_012001373v1 3760117 205 - 3785965 tccatataaactccacccggagcatgatacagagtagaatcagcacccc-agaaggctcccatgcc-ccctcctccttctagaaaggtccccaatgttgca----ccttccagaaaggtgatgacggttttg-cc-tttgtcagtatagatgaattttgcctgatttttaccttcgtgtaagtggattcccacaACAAAGAGACTCAACAGAG i cerAty1.NW_012001373v1 C 0 I 24 s chlSab2.chr2 90350113 204 - 90373283 tccatagaaactccacctggagcaagatacagagtagaatcagcacccc-agaaggctcccatgcc-ccctcctccttctagaaa-gtctccaatgttgca----ccttccagaaaggtgatgacggttttg-cc-tttgtcagtatagatgaattttgcctgatttttaccttcgtgtaagtggattcccacaACAGAGAGACTCAACAGAG i chlSab2.chr2 C 0 I 24 s manLeu1.NW_012101652v1 150877 202 - 179258 tccatataaactccacccggagcatgatacagagtagaatcggcacccc-ggaaggctcccatgcc-ccctcctc---ctagaaaggtccccaatgttgca----ccttccagaaaggtgatgacggttttg-cc-tttgtcagtatagatgaattttgcctgatttttaccttcgtgtaagtggattcctacaACAAAGAGACTCAACAGAG i manLeu1.NW_012101652v1 C 0 I 24 s colAng1.NW_012114444v1 5620432 205 - 5823884 accatataaactccacctggagcaagatacagagtggaatcagcacccc-agaaggctcccatgcc-ccctcctccttctagaaaggtccccagtgttgca----ccttccagaaaggtgatgatggttttg-cc-tttgtcagtacagacgaattttgcctgatttttacctttgtgtacgtggattcccacaACAGAGAGACCCATCTAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177289 210 + 159171411 tccatataaactccacccagagcaagatgcagagtagcaacagcaccccgagaaggctccattgcc-ttctcctccttctagaaaggttaccactgttgtgctccccttccagaaagctgatgactgttttg-cctttc-tcagcacagataaattttgcctgatttctacattcgtgtaagtggattcccacaAGAAAGAGACTCATTTATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341257 208 + 16356641 tccatataaactccacccagagcaagatgcagcgtagaaacagctccccaaggaggctacactgcc-ttctcctccttctggaaagggtaccactgttgtactccccttccagaaagctgatgactgttttg-cc-ttc-tcagcacggatgaattttgcctgatttctaccttcgtgtaagtggattcccacaC-AGAGAGACTCATCTATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215441 209 + 1231380 tccatataaactccacccagaacaagatgcagagtagaaacagcaccccaggaaggctccactgcc-ttctcctccttctggaaaggttaccactgttGTACTCCCCTTCCAGAAAGCTGATGACTGTTTTG-CC-TTC-TCAGCACAAATGAATTTTGCCTGATTTCTACCTTTGTGTAAGTGGATTCCCACAACAGAGAGACTCATCTATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741429 209 + 11732439 tccatataaactccacccagagcaagacgcagagtggaaacagcaccccaagaaggctgcatggcc-ctctcctccttctagaaaagttaccactgttgtactccccttccagaaagctggtgactgttttg-cc-ttcgtcagcacagatgaattttgcctgatttctacc-tcgtgtaagtggattcccacaACAGAGAGACTCATCTATG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22906919 178 + 22939663 tctctgtaatcaccacccagaaaaggactcagagtagcatcaacatcct-agaaggctcc-gtgcc-ctttcct-------------------------------ctttccagaaagctaactgctgtttta-cccttcattagcactgatgagttttgtttggttgatgccttcatggaagtggattctcacaacatgGAGCTTTATCTAAG i otoGar3.GL873542 C 0 I 3931 s canFam3.chr24 47656810 179 + 47698779 ttcatacaagcaccacccagaacgaagtatggagtagaatcagcatccc-agaa-gctctcatgctgcccttct-------------------------------gcctccagggaggagagcgctgctttgtcc-tccatcatcacaaataggcattgcctgttttttaccttcatataaatggattcccacaACAAAGTGACTCATCTAAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 330139 126 - 397369 tccatgggggtaccacc-agaataaggtacagaaT----------------------------------------------------------------------------------GTGGTGGTAAGTAGA-AC-tctgtcagcatagattagctttgcctggttttggccctcatatC--TGTATTTCCACACTGTGGAGAGTCAATCAAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1916092 281 - 2029793 I e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925815 545 + 57149010 I a score=987061.000000 s hg38.chr20_KI270870v1_alt 172438 98 + 183433 TTGAGTGTCAATACTGTGTTCC----------------------------CAGTTAACGT--AGGGGCAGTTTTATAT----CGGGGGAGCACTGTCATCATTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TGTA-- s panTro5.chr20 66507866 98 + 66533130 TTGAGTGTCAATACTGTGTTCC----------------------------CAGTTAACGT--AGGGGCAGTTTTATAT----CGGGGGAGCACTGTCATCATTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TGTA-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175078 98 + 62195757 TTGAGTGTCAATACTGTGTTCC----------------------------CAGTTAACGT--AGGGGCAGTTTTATAT----CGGGGGAGCACTGTCATCATTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TGTA-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561520 95 - 578057 TTGAGTGTC-ATACTGTGTT-C----------------------------CAGTTAACGT--AGGGGCAGTTTTATGT----CGGGGGAGCACTGTCATCATTAAATGGACTTGT-------------------------------------AACA-TTCTCAGT--TGTA-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110082989 98 - 110113093 TTGAGTGTCAATACTTTGTTCT----------------------------CAGTTAACGT--AGGGGCAGTTTTATAT----GGGGGGAGCACTTTCATCGTTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TTTA-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822770 98 - 92844088 TTGAGTGTCAATACTGTGTTCT----------------------------CAGTTAACGT--AGGGGCAGTTTTATAT----GGAGGGAGGGCTTTCATCATTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TTTA-- i rheMac8.chr10 I 24 C 0 s macFas5.chr10 96488439 98 + 96509753 TTGAGTGTCAATACTGTGTTCT----------------------------CAGTTAACGT--AGGGGCAGTTTTAGAT----GGAGGGAGGCCTTTCATCATTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TTTA-- i macFas5.chr10 I 24 C 0 s macNem1.NW_012014244v1 16958410 98 - 16982598 TTGAGTGTCAATACTGTGTTCT----------------------------CAGTTAACGT--AGGGGCAGTTTTATAT----GGAGGGAGGCCTTTCATCATTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TTTA-- i macNem1.NW_012014244v1 I 24 C 0 s cerAty1.NW_012001373v1 3760346 98 - 3785965 TTGAGTGTCAATACTGTGTTCT----------------------------CAGTTAACGT--AGGGGCAGTTTTATAT----GGAGGGAGAGCTTTCATCATTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TTTA-- i cerAty1.NW_012001373v1 I 24 C 0 s chlSab2.chr2 90350341 98 - 90373283 TTGAGTGTCAATACTGTGTTCT----------------------------CAGTTAACGT--AGGGGCAGTTTTATAT----GGAGGGAGGGCTTTCATCATTAAGTGGACTTGT-------------------------------------AACATTTCTCAAT--TTTA-- i chlSab2.chr2 I 24 C 0 s manLeu1.NW_012101652v1 151103 98 - 179258 TTGAGTGTCAATACTGTGTTCT----------------------------CAGCTAACGT--AGGGGCAGTTTTATAT----GGAGGGAGGGCTTTCATCATTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TTTA-- i manLeu1.NW_012101652v1 I 24 C 0 s colAng1.NW_012114444v1 5620637 98 - 5823884 TTGAGTGTCAATACTGTGTTCC----------------------------CAGTTAATGT--AGGGGCAGTTTTATAC----GGAGGGAGCACTTTCATCACTAAGTGGACTTGT-------------------------------------AACATTTCTCAGT--TTTA-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177499 98 + 159171411 CTGGGTGTCAGTATTTCGTTCC----------------------------CACTTAACAT--AGGGGCAGTTTTATAT----AGAGGGAGCACTTTCATCATTAAGTAGGCTTGT-------------------------------------AACATTTCTCAGT--TTTA-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341465 102 + 16356641 CTGAGTGTCAGTACTTTGTTCT----------------------------TACTTAACAT--AGGGATAGTTTTATGTGGAGGGAGGGAGCACTTTCATCATTAAGTAGACCTGT-------------------------------------AACATTTCTCAGT--TTTA-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215650 98 + 1231380 CTGAGTGTCAGTACTTTGTTCT----------------------------CACTTAACAT--AGGGGCAGTTTTATAT----GGAGGGAGCACTTTCATCATTAAGTAGACTTGT-------------------------------------AACATTTCTCACT--TGTA-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741638 98 + 11732439 CTGAGTGTCAGTACTTTGTTCT----------------------------CACTTGACAC--AGGGGCAGTTCTATAT----GGAGGGAGCGCTTTCATCACTAAGTACACTTGT-------------------------------------AACATTTCTCAGT--TTTA-- i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47656989 89 + 47698779 -------------CTGTGTTAG----------------------------TAGATCTCATCCAGAGGCAGTTTTATAT----GGAGGGAACACCTTTATTGTTAAATGGGCTTGT-------------------------------------AACTTTTCTCACCAATTTA-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 330265 162 - 397369 ---TGTATCATTAGCTTGTTCTTTTACATTTGCTGGGTACTTCTTACCCACATTTAACCT--AAAGGCAGTTTTATAC----AGAGGGAATACTTTTATCATTAAGTAGGCTTGTAATTTTTTCTTAAACTTTAAAAAACTTAAAAAAAAGAAACTTTCCTCACT--GCTATA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1916092 281 - 2029793 I e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925815 545 + 57149010 I e otoGar3.GL873542 22907097 3931 + 22939663 I a score=199939.000000 s hg38.chr20_KI270870v1_alt 172536 15 + 183433 TTTCAAATTACTGAT s panTro5.chr20 66507964 15 + 66533130 TTTCAAATTACTGAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175176 15 + 62195757 TTTCAAATTACTGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561615 15 - 578057 TTTCAAATTACTGAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083087 15 - 110113093 TTTCAAATTACTGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822868 15 - 92844088 TTTCAAATTACTGAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96488537 15 + 96509753 TTTCAAATTACTGAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16958508 15 - 16982598 TTTCAAATTACTGAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3760444 15 - 3785965 TTTCAAATTACTGAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90350439 15 - 90373283 TTTCAAATTACTGAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151201 15 - 179258 TTTCAAATTACTGAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620735 15 - 5823884 TTTCAAATTACTGAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177597 15 + 159171411 TTTCAAATTACTGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341567 15 + 16356641 TTTCAAATTACTGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215748 15 + 1231380 TTTCAAATTACTGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741736 15 + 11732439 TTTCAAATTACCGGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1916373 15 - 2029793 TTTCAAATTACTGGT i proCoq1.NW_012150197v1 I 281 C 0 s canFam3.chr24 47657078 15 + 47698779 TTGCCGATTATTGAT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 330427 15 - 397369 TTTCAAGTTCCTTAT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e micMur3.chr18 56925815 545 + 57149010 I e otoGar3.GL873542 22907097 3931 + 22939663 I a score=547672.000000 s hg38.chr20_KI270870v1_alt 172551 39 + 183433 AAATATCCTTTGATAT-AAAAATGTTTCATTGTGACT----TGG s panTro5.chr20 66507979 39 + 66533130 AAATATCCTTTGATAT-AAAAATGTTGCATTGTGACT----TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175191 39 + 62195757 AAATATCCTTTGATAT-AAAAATGTTTCATTGTGACT----TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561630 39 - 578057 AAATATCCTTTGATAT-AAAAATGTTTCATTGTGACT----TGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083102 40 - 110113093 AAATATCCTTTGATATAAAAAAAGTTTCATTGTGACT----TGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822883 40 - 92844088 AAATATCCTTTGATATAAAAAATGTTTCATTGCGACT----CGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96488552 40 + 96509753 AAATATCCTTTGATATAAAAAATGTTTCATTGCGACT----CGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16958523 40 - 16982598 AAATATCCTTTGATATAAAAAATGTTTCATTGTGACT----TGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3760459 40 - 3785965 AAGTATCCTTTGATATAAAAAATGTTTCATTGTGACT----TGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90350454 40 - 90373283 AAATATCCTTTGATATAAAAAATGTTTCATTGTGACT----TGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151216 40 - 179258 AAATATCCTTTGATATAAAAAATGTTTCATTGTGACT----TGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620750 40 - 5823884 AAATATCCTTTGATATAAACAATGTTTCATTGTGACT----TGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177612 40 + 159171411 GAATATCCTTTGATGTATAACACGTTTTATTGTGACT----TGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341582 44 + 16356641 AAATATCCTTTTATGTAAAACATGTTTTACTGTGACTTTACTGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215763 40 + 1231380 AAATATCCTTTGATGTAAAACATGTTTTATTGTGACT----TGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741751 40 + 11732439 AAATACCCTTTGATGTAAAACATGTTTTATTGTGACT----TGG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56926360 40 + 57149010 AAATTTCCTTTGATATAAAAAATGTTTCGTTGTGATT----TAG i micMur3.chr18 I 545 C 0 s proCoq1.NW_012150197v1 1916388 40 - 2029793 AAATTTCCTTTGATATAAAAAATGTTTCATTGTGACT----TAG i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47657093 40 + 47698779 AAATTTCCTTAGATATAAAAAATGTTTCATTGTAACT----TGG i canFam3.chr24 C 0 I 123 s dasNov3.JH569290 330442 39 - 397369 AAAGTTCCTTTGACAT-AAAAATGTTTTATTGTGATT----TAG i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e otoGar3.GL873542 22907097 3931 + 22939663 I a score=438598.000000 s hg38.chr20_KI270870v1_alt 172590 34 + 183433 AAGCATAGTTTTATCTTAATGATGATGATTGAAC s panTro5.chr20 66508018 34 + 66533130 CAGCATAGTTTTATCTTAATGATGATGATTGAAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175230 34 + 62195757 AAGCATAGTTTTATCTTAATGATGGTGATTGAAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561669 34 - 578057 AAGCATAGTTTTATCTTAATGATGATGATTGAAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083142 34 - 110113093 AAGCATAGTTTTATCTTAATGATGATGATTGACC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822923 34 - 92844088 AAGCATAGTTTTATCTTAATGATGATGATTGAAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96488592 34 + 96509753 AAGCATAGTTTTATCTTAATGATGATGATTGAAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16958563 34 - 16982598 AAGCATAGTTTTATCTTAATGATGATGATTGAAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3760499 34 - 3785965 AAGCATAGTTTTATCTTAATGATGATGATTGAAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90350494 34 - 90373283 AAGCATAGTTTTATCTTAATGATGATGATTGAAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151256 34 - 179258 AAGCATAGTTTTATCTTAATGATGATGACTGAAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620790 34 - 5823884 AAGCATAGTTTTATCTTAATGATGATGATTGAAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177652 34 + 159171411 AAGCATAGTTTTATTTTAATGACGGTGATTGAAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341626 34 + 16356641 AAGCATAGTTTTATTTTAAAGATGATGATTGAAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215803 34 + 1231380 AAGCATAGTTTTATTTTAAAGACGATGATTGAAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741791 34 + 11732439 AAGCGTAGTTTTATTTTAAAGAAGATGATTGAAC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56926400 31 + 57149010 AGTCATAGTTTTATTTTAATGA---TGATTGAAA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1916428 31 - 2029793 AATCATAGTTTTATTTTAATGA---TGATTGAAA i proCoq1.NW_012150197v1 C 0 C 0 s canFam3.chr24 47657256 33 + 47698779 aagctgagtctgagcctgac-atgcggcttgaac i canFam3.chr24 I 123 I 2 s dasNov3.JH569290 330481 30 - 397369 AATCATAGTTTTATTTTAATGA---TGATTAAA- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I e otoGar3.GL873542 22907097 3931 + 22939663 I a score=1090693.000000 s hg38.chr20_KI270870v1_alt 172624 87 + 183433 CCTGTTTTGTGA---------------ATATTAT---AATGCTCACAT--------CTGAGTGTTCTGGGCAA---------------CTTTTCAGGGAAAACAGAATCGT----------CTTAAATGTT------A----CCTCTG--- s panTro5.chr20 66508052 87 + 66533130 CCTGTTTTGTGA---------------ATATTAT---AATGCTTACAT--------CTGAGTGTTTTGGGCAA---------------CTTTTCAGGGAAAACAGAATCGT----------CTTAAATGTT------A----CCTCTG--- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175264 87 + 62195757 CCTGTTTTGTGA---------------ATATTAT---AATGCTCACAT--------CTGAGTGTTTTGGGCAA---------------CTTTTCAGGGAAAACAGAATCGT----------CTTAAATGTT------A----CCTCTG--- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561703 87 - 578057 CCTGTTTTGTGA---------------ATATTAT---AATGGTCACAT--------CTGAGTGTTTTGGGCAA---------------CTTTTCAGGGAAAACAGAATCAT----------CTTAAATGTT------A----CCTCTG--- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083176 87 - 110113093 GCTGTTTTGTGA---------------ATATTAT---AATGCACACAT--------CTGAGTGTTTTGGGGAA---------------CTTTTCAGGGAAAACAGAATCGT----------CTTAAATGTT------A----CCTCTG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92822957 87 - 92844088 CCTGTTTTGTGA---------------ATATTAT---AATGCACACAT--------CTGAGTGTTTTGGGAAA---------------CTTTTCAGGGAAAGCAGAATTGT----------CTTAAATGTT------A----CCTCTG--- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96488626 87 + 96509753 CCTGTTTTGTGA---------------ATATTAT---AATGCACACAT--------CTGAGTGTTTTGGGAAA---------------CTTTTCAGGGAAAGCAGAATTGT----------CTTAAATGTT------A----CCTCTG--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16958597 87 - 16982598 CCTGTTTTGTGA---------------ATATTAT---AATGCACACAT--------CTGAGTGTTTTGGGAAA---------------CTTTTCAGGGAAAGCAGAATTGT----------CTTAAATGTT------A----CCTCTG--- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3760533 87 - 3785965 CCTGTTTTGTGA---------------ATATTAT---AATGCACACAT--------CTGAGTGTTTTGGGAAA---------------CTTTTCAGGGAAAGCAGAATTGT----------CTTAAATGTT------A----CCTCTG--- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90350528 87 - 90373283 CCTGTTTTGTGA---------------ATATTAT---AATGCACATAT--------CTGAGTGTTTTGGGAAA---------------CTTTTCAGGGAAAACACAACCCT----------CTTAAATGTT------A----CCTCTG--- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151290 87 - 179258 CCTGTTTTGTGA---------------ATATTAT---AATGCACACAT--------CTGAGTGTTTTGGGAAA---------------CTTTTCAGGGAAAACAGAATTGT----------CTTAAATGTT------A----CCTCTG--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620824 87 - 5823884 CCTGTTTTGTGA---------------ATATTAT---AATGCACACAT--------CTGAGTGTTTCGGGAAA---------------CTTTTCAGGGAAAACAGAATCGT----------CTTAAATGTT------A----CCTGTG--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177686 87 + 159171411 CCTGTTTTGTGA---------------ATATTAA---AATGCACACAT--------CTGAATGTTTTGGGGAA---------------CCTTTCAGGGAAAACAGAATCGT----------CTTAAATGTT------A----CCTCCA--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341660 85 + 16356641 CCTGTTTTGTGA---------------ATATTAA---AATGCACACAT--------CTGAGTATTTTGGGGAA---------------TGTTTCAGGGAAAAC--AATCAT----------CTTAAATGTT------A----CCTCTG--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215837 87 + 1231380 CCTGTTTTGTGA---------------ATATTAA---AATGTATACAT--------CTGAGTGTTTTGGGGAA---------------CCTTTCAGGGAAAACAGAATCAT----------CTTCAATGTT------A----CCTCTG--- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741825 86 + 11732439 CCTGTTTTGTGA---------------ATATTAA---AATGCACACAT--------CTGAGTGTTTT-GGGAA---------------CCTTTCAGGGAAAATGGAATCGT----------CTTAAATGTT------A----CCTCTG--- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56926431 89 + 57149010 CCTATTTTGTGA---------------GCATTATTAAAATGCCCACAG--------CTGAGTGTTTTGGGGGGC--------------CCTTTCGAGGAAAACAG--TCAT----------CTTAAATGCT------G----CTTCTG--- i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1916459 88 - 2029793 CCTATTTTGTGA---------------GCATTATTAAAATGCCCACAT--------CTGAGTGTTCTGGGGGA---------------CCTTTCAGGGAAAACAG--TCAT----------CTTAAATGCT------A----CCTCTG--- i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911028 92 + 22939663 CCTCTTCTGT-A---------------ATATTATTAAAATG-CCACAT--------CTGAGTATTTTGGGGGA---------------TATTTCAGGGAAAACAGAACCAT----------CTTAAATGCT------GCCTACCTCTG--- i otoGar3.GL873542 I 3931 C 0 s canFam3.chr24 47657291 141 + 47698779 gcgactttgagatcatgacttgagctgaaatcaa---gagtcggacattcagttgactgagccactcaggaaccccAGTTACAGTTTTCTTTTAATGATTATCAAAATAATTGTGTCCCTATTTGACTGTTTTAGTGA----CCTTTT--- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 330511 87 - 397369 ACTGTTTTGGGA---------------GGATTACTAAAATGATCATAT--------CTGAGTATTTTGGGGGA---------------CTTT---GGTAGATAATAGTCTT----------CCTAA---CT------G----CCTGTGCCA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181843528 506 + 182113224 I a score=1972527.000000 s hg38.chr20_KI270870v1_alt 172711 137 + 183433 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTCCATTTGCAAATACATGTTTCTTCTTTAGTTCATTAG------TAAGA-CC-TGAAC-------------ACTTG--------------------------------GTTTGTCT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGTGAGC----AGAGAAGCCCAGGC s panTro5.chr20 66508139 137 + 66533130 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTCCATTTGCAAATACATGTTTCTTCTTTAGTTCATTAG------TAAGA-CT-TGAAC-------------ACTTG--------------------------------GTTTGTCT-----CCA-TTTTCAAATGATTCTTGAAAAGTTTGTGAGC----AGAGAAGCCCAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175351 137 + 62195757 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTCCATTTGCAAATACATGTTTCTTCTTTAGTTCATTAG------TAAGA-CT-TGAAC-------------ACTTG--------------------------------GTTTGTCT-----CCA-TTTTCAAATGATTCTTGAAAAGTTTGTGAGC----AGAGAAGCCCAGGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561790 137 - 578057 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTCCATTTGCAAATATATGTTTCTTCTTTAGTTCCTTAG------TAAGA-CT-TGAAC-------------ACTTG--------------------------------GTTTGTCT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGTGAGC----AGAGAAGCCCAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083263 137 - 110113093 GACAAACAG-----GTGAGG----------CGT-GT-GT-CAGTTCCACTTGAAAACACGTGTTTCTTCTTTAGTTCATTAG------TAAGA-CT-TGAAC-------------ACTTG--------------------------------GTTTGTTT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGAGAGC----AGAGAAGCCCAGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823044 137 - 92844088 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTGCACTTGCAAATACATGTTTCTTCTGTAGTTCATTAG------TAAGA-CT-TGAAC-------------ACTTG--------------------------------GTTTGTTT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGAGAGC----AGAGAAGCCCAGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96488713 137 + 96509753 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTGCACTTGCAAATACATGTTTCTTCTGTAGTTCATTAG------TAAGA-CC-TGAAC-------------ACTTG--------------------------------GTTTGTTT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGAGAGC----AGAGAAGCCCAGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16958684 137 - 16982598 GAGAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTGCACTTGCAAATACATGTTTCTTCTGTAGTTCATTAG------TAAGA-CT-TGAAC-------------ACTTG--------------------------------GTTTGTTT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGAGAGC----AGAGAAGCCCAGGC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3760620 137 - 3785965 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTGCACTTGCAAATACATGTTTCTTCTGTAGTTCATTAG------TAAGA-CT-TGAAC-------------ACTTG--------------------------------GTTTGTTT-----CAA-TTTTCAAATGATTCTTTAGAAGTTTGAGAGC----AGAGAAGCCCAGGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90350615 137 - 90373283 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTGCACTTGGAAATACATGTTTCTTCTTTAGTTCATTAG------TAAGA-CT-TGAAC-------------ACTTG--------------------------------GTTTGTTT-----CCA-TTTTCAAATGATTCTTTAAAAGTTCCAGAGC----AGAGAAGCCCAGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151377 137 - 179258 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTGCACTTGCAAATACATGTTTCTTCTGTAGTTCATTAG------TAAGA-CT-TGAAC-------------ACTTG--------------------------------GTTTGTTT-----CAA-TTTTCAAATGATTCTTTAAAAGTTTGAGAGC----AGAGAAGCCCAGGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5620911 137 - 5823884 GACAAACAG-----GTGAGG----------CCT-GT-GT-CAGTTGCACTTGCAGATACATGTTTCTCCTTTAGTTCATTAG------TAAGA-CA-TGAAC-------------ACTTG--------------------------------GTTTGTTT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGAGAGC----AGAGAAGCCCAGGC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177773 131 + 159171411 GACAAACA-----------G----------CCT-GT-GT-CCGTTTCACTTGCAAATACATGTTTCTTCTTTAATTCATTAG------TTAGA-CT-TGAAT-------------AGTTG--------------------------------TTTTTTTT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGAGGAT----AGAGAAGCCCAGGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341745 137 + 16356641 GACAAACAG-----GTGAGG----------CCT-AT-GT-CTGTTTCACTTGCACATACATGTTTCTTCTTTAATTCATTAG------TTAGA-TT-TGAGC-------------AGTTG--------------------------------TTTTTTTT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGAGGGT----AGAGAAGCCCAGGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1215924 136 + 1231380 AATAAACAG-----GTGAGG----------CCT-AT-GT-CCGTTTCGCTTGCAAATACATGTTTCTTCTTTAATTCATTAG------TTAGA-CT-TGAGC-------------AGTTG---------------------------------TTTTTTT-----CCA-TTTTCAAATGATTCTTTAAAAGTTTGAGGGT----AGAGAAGCCCAGGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2741911 136 + 11732439 CACAAACAG-----GTGAGG----------GTT-AT-GT-TCGTTTCACTTGCAAATACATGTTTCTTCTTCAATTCATTAG------TTAGA-CT-TGAAC-------------GGTTG---------------------------------GTTTTTT-----CCA-TTTTCAAATGATTCTTTACAAGTTTGAGGGT----AGAGAAGCCCAGGC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56926520 138 + 57149010 GACAAACAG-----AGGAGA----------CCT-GT-GT-TCGTTTCACTTGCAAATACATGTTTCTTTTTTAATTCATTAG------TAACA-CTCTGAAC-------------TCTTG--------------------------------GCTTTTTT-----CCC-TTTTCAAATGATTCTTTAAAAGTTTAAGAGC----AGAGAAGCCCAGGC i micMur3.chr18 C 0 I 137 s proCoq1.NW_012150197v1 1916547 138 - 2029793 GACAAACAG-----GTGAGA----------CCT-GT-GT-TAGTTTCACTTGCAAATACATGTTTCTCTTTTAATTCATTAG------TAAGA-CTCTGAAC-------------TCTTG--------------------------------GCTTTTTT-----CCC-TTTTCAAATGATTCTTTAAAAGTTCGAGAGC----AGAGAAGTCCAGGC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911120 143 + 22939663 GATAAACAG-----GTGAGA----------TCT-CT-GG-TAGTTTCATTTATAAATACTTGTTTCTTTCTTAATTCATTAGTATAAATAAGA-ACCTGAAC-------------TCTTG--------------------------------GCTTTTTG------TC-TTTTCAAATGATTGTTTAAAAGTTTGAGAGC----AGAGGCATCAAAAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181844034 140 + 182113224 GAAATATAG-----ATAAAT----------CCTAAT-AC-AAATTTCATTTGTAAATACAGGTTT---TTAAAATTTGTTGT------AAAAG-CT-ACTAC-------------TCTTG--------------------------------CCTTTTTT-----TCAGTTTGCAAATGATACTTTTAATGTTTGAGAGCTTTTTGAGAAGCCAAGGC i mm10.chr2 I 506 C 0 s canFam3.chr24 47657432 149 + 47698779 GTGGAACA--------TAGT----------CCT-GA-GTACAGTTTCATTTGGAAATACATTTTTCTTCTTCAATTTATTAG------TAAGATCT-TGAATTACTGGTTGTAGATCTTG--------------------------------GCTTTTTT-----ATG-TCTTCAAATAATTCTTTAACAGTTTGAGAGC----CGAGTGACCCAGGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 330598 191 - 397369 GACAAATAAAGGCTGGGAGGCTGTAACCTCCCT-GTAAC-CAGTTTCACTTGCAAATATGTGTTTCTTCTTCAGAGTACTAA------TAAGA-TACTAAAC-------------TCTTGTGTTTCAGACGTTGGCTATTTTTTGTTTGTTTGTTTGTTTTTCCCCCA-TTTTCAAATGAGTCTTTAAATGTTTAAGAGC----AGAGAGACCCAGGC i dasNov3.JH569290 C 0 C 0 a score=1463590.000000 s hg38.chr20_KI270870v1_alt 172848 147 + 183433 CT-------------------------------------------------------CAAGTATT------------------TACGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATACTGTGATGAGACTTCAAAACTTTGTGAATGTC----TGTAGTTACACA-TGTTAAGTCAGACGTGTT-ACAGTTGGT-----AGA----AGTGAACAGATGAGCAAGAGTTCTT-ACTCTGGTTCTACATG s panTro5.chr20 66508276 147 + 66533130 CT-------------------------------------------------------CAAGTATT------------------TACGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATACTGTGATGAGACTTCAAAACTTTGTGAATGTC----TGTAGTTACACA-TGTTAAGTCAGACGTGTT-ACAGTTGGT-----AGA----AGTGAACAGATGAGCAAGAGTTCTT-GCTCTGGTTCTACATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175488 147 + 62195757 CT-------------------------------------------------------CAAGTATT------------------TACGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATACTGTGATGAGACTTCAAAACTTTGTGAATGTC----TGTAGTTACACA-TGTTAAGTCAGACGTGTT-ACAGTTGGT-----AGA----AGTGAACAGATGAGCAAGAGTTCTT-GCTCTGGTTCTACATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 561927 148 - 578057 CT-------------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAGCC----------------------------------------------CGTGATACTGTGATGAGACTTCAAAACTTTGTGAATGTC----TGTAGTTACACA-TGTTAAGTCAGACGTGTT-ACAGTTGGT-----AGA----AGTGAACAAATGAGCAAGAGTTCTT-GCTCTGGTTCTACATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083400 145 - 110113093 CA-------------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATAATGTGATGAGACTTCAAAACTTTCTGAATGTC----TGTAGTTGCAC---GTTAAATCAGATGTGTT-ACAGTTGGT-----AGA----CGTGAACAAATGAGCAGGAGTTCTT-GCTCTGGTTCTACATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823181 147 - 92844088 TC-------------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATAATGTGATGAGACTTCAAAACTTGGTGAGTGTC----TGCAGTTGCAGA-TGCTAAATCAGATGCGTC-ACAGTTGGT-----AGA----AGTAAACAAATGAGCAGGAGCCCTT-GCTCTGGTTCTACATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96488850 147 + 96509753 TC-------------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATAATGTGATGAGACTTCAAAACTTGGTGAGTGTC----TGCAGTTGCAGA-TGCTAAATCAGATGCGTC-ACAGTTGGT-----AGA----AGTAAACAAATGAGCAGGAGCCCTT-GCTCTGGTTCTACATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16958821 147 - 16982598 TC-------------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATAATGTGATGAGACTTCAAAACTTGGTGAGTGTC----TGCAGTTGCAGA-TGCTAAATCAGATGCGTC-ACAGTTGGT-----AGA----AGTAAACAAATGAGCAGGAGCCCTT-GCTCTGGTTCTACATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3760757 147 - 3785965 CC-------------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATAATGTGATGAGACTTCAAAACTTGGTGAGTGTC----TGCAGTTGCAGA-TGCTAAATCAGATGCGTC-ACAGTTGAT-----AGA----AGTAAACAAATGAACAGGAGCTCTT-GCTCTGGTTCTACATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90350752 147 - 90373283 CC-------------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATAATGTGATGAGGCTTCAAAACTTGGTGAGTGTC----TGCAGTTGCAGA-TGCTAAATCAGATGCGTC-ACAGTTGGT-----AGA----AGTAAACAAATGAGCAGGAGCTCTT-GCTCTGGTTCTACATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151514 147 - 179258 CC-------------------------------------------------------CAAGTATT------------------TATCAT----------------------GTGGT---GAG-C----------------------------------------------TGTGATAATGTGATGAGACTTCAAAACTTGGTGAGTGTC----TGCAGTTGCAGA-TGCTAAATCAGATGCGTC-ACAGTTGGT-----AGA----AGTAAACAAATGAGCAGGAGCTCTT-GCTCTGGTTCTACATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621048 147 - 5823884 CC-------------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGATAATGTGATGAGACTTCAAAACTTGGTGAATGTC----TGCAGTTGCAGA-TGCTAAATCAGATGCGTC-ACAGTTGGT-----AGA----AGTAAACAAATGAGCAGGAGCTCTT-GCTCTGCTTCTACATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58177904 157 + 159171411 ATCAGAA--------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CATGGTAATATAATGAGACCTCAAAACTTTGTGAATTTC----TGTAATTATACA-TGTTAAATCAGATGTGTT-ACAGTTGATAAAAGAGA----AGCAAATGAATGAGCAAGAGTTCTT-GTTCTGTTTTTACATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16341882 158 + 16356641 GTCAGAA--------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGGTAATGTGATGAGACCTCCAAACTTTGTGAATTTC----TGTAATTGTACA-TGTTAAGTCAGATGTGTTAACAGTTGATAAAAGAGA----AGCAAACGAATGAGCAAGTGTTCTT-TTTCTGTTTTTACATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1216060 157 + 1231380 ATCAGAA--------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGGTAATGTGATGAGACCTCAAAACTTTGTGAATTTC----TGTAATTATACA-TGTTAAATCAGCTGTGTT-ACAGTTGATAAGAGAGA----AGCAAACGAATGAGCAAGAGTTCTT-GTTCTGTTTTTACATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2742047 157 + 11732439 GTCAGAA--------------------------------------------------CAAGTATT------------------TATGAT----------------------GTGGT---GAG-C----------------------------------------------CGTGGAAATGTGATGAGACCTCAAAACTTTGTGAATTTC----TGTAATTGTACA-TGTTAAATCAGATGTGTT-ACAGTTGATAAAAGAGA----AGCAAACGAATGACCAAGAGTTCTT-GTTCTGTTTTTACATG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1916685 137 - 2029793 ---ATCAA----------------------------------------------AACAAGCTATT------------------TACGAT----------------------GTGGT---GCC-T----------------------------------------------AGGGATAACGTGATGAGACT-----------------TC----TGTAATTGTACA-TGCTAAATCAGACATGTT-GTAATTGATAAAGTAAA----AAT----AAATGAGCAAGATTTCGA-GCCCAAGTTGTAAAAC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911263 135 + 22939663 ---------------------------------------------------------AAGTTATT------------------GAAGAT--------------------GGGTGGT---GGC-C----------------------------------------------AGGGATAACAGGACAAGACT-----------------TC----TGTAATTATACT-TGCTAAATCAGGTGTGTT-GTGATTGATAGAATAAA----AATAAACAAATGAGTAAGATTTGTA-GCCCAAGTTGTAAAAG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181844174 198 + 182113224 -------ATCA-------------------------------------------AAACAAATACTATGTTAGTGAATGTAACCTATACTACACATTGAAAGACTCCCTTGGGTGGTTTAGAG-C----------------------------------------------CACGG--ATATGCTAAGACCTCAAACCCTTGTGAGTTTC----TGTAATTATACACTACAGAATTATCTGTGTT-GTAATTAAG-----AAAGTACAGAAAACAAATGAGCAAGGGTTCTT-TTCCTCGTTCTAAGAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47657581 227 + 47698779 --------TTAGGAAAGCTGTG---------GAGTTGGTAATT-----TCAAAGAAACCAGTATT------------------TACAAT----------------------GTGAT---GAG-CATTGTGTAC--CCTGCATATTTAAAGATTAGCTTGAGTGATTTAGGTCTGATAACGTGGTTAGACCTCAAAAACTCGCGAATTTCTTCATGTAATTATACA-TGCTGAATCTGGTGCATT-GCAGCTGAT-----AAA----ATAGAAATAAAGAGTAAAA-TTCTT-GCCCTAGTTCTAAAAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 330789 238 - 397369 --------TTCAGAAAGATTTGCTCACCTTTCCTTTTGGAATCAGTGATGTAATGGAAAAGTATT------------------TATGAG----------------------ACAGT---AAG-T---GGGAACTACAAGCACATTTAGAGATTAGCTTGTATAATTTAGACCCAATAATGTGA-AAGACTTAAAAACTTTATGAATTTC----TGTAATTTTCTA-TGCTAAATCAGATGTATC-GTAATTGAT---AGAAA----ATAAGACAACTAATCAAGAGCTCTTAACCCTAATTCTAAAA- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56926658 137 + 57149010 I a score=2517101.000000 s hg38.chr20_KI270870v1_alt 172995 133 + 183433 TTTTCTTATTCTTAAACCTTTTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA s panTro5.chr20 66508423 133 + 66533130 TTTTCTTATTCTTAAACCTTTTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175635 133 + 62195757 TTTTCTTATTCTTAAACCTTTTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562075 133 - 578057 TTTTCTTATTCTTAAACCTTTTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083545 133 - 110113093 TTTTCTTATTCTTAAACCTTTTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823328 133 - 92844088 TTTTCTTATTCTTAAACGTTTTAGGTCCTTTTGGCGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAATATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96488997 133 + 96509753 TTTTCTTATTCTTAAACGTTTTAGGTCCTTTTGGCGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAATATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16958968 133 - 16982598 TTTTCTTATTCTTAAACGTTTTAGGTCCTTTTGGCGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAATATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3760904 133 - 3785965 TTTTCTTATTCTTAAACGTTTTAGGTCCTTTTGGCGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAATATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90350899 133 - 90373283 TTTTCTTATTCTTAAACGTTTTAGGTCCTTTTGGCGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAATATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151661 133 - 179258 TTTTCTTATTCTTAAACGTTTTAGGTCCTTTTGGCGTGAACCATGGGGTGGAACTTCACTCAGATGTGATAGAATATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621195 133 - 5823884 TTTTCTTCTTCTTAAACCTTTTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCACTCTGATGTGATAGAATATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58178061 133 + 159171411 GTTTCTTATTCTTAAACCTTCTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCATTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342040 130 + 16356641 TTTTC---TTCTTAAACTTTCTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCATTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1216217 130 + 1231380 TTTTC---TTCTTAAACCGTCTAGGTCCTTTTGGTGTGAACCATGGGGTCGAGCTTCATTCGGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTCTTCATTAGAACAAGTGATAGTTTTGACAAGTAAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2742204 133 + 11732439 TTTTCTTATTCTTAAACCTTCTAGGTCCTTTTGGTGTGAACCATGGGGTGGAACTTCATTCAGATGTGATAGAGTACGCAAAGCAGAAACTGGACTTTTTCATCAGAACAAGTGATAGTTTTGACAAGTAAGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56926795 133 + 57149010 TTTTCTCATTCTCAAAACGTTTAGGTCCTTTTGGTGTAAACCATGGGGTGGAACTTCACTCAGATGTGATAGAGTATGCAAAGCAGAAACTGGACTTTTTCATCAGAACAAGTGAAAGCTTCGACAAGTAAGA i micMur3.chr18 I 137 I 122 s proCoq1.NW_012150197v1 1916822 133 - 2029793 TTTTCTCATTCTCAAAACTTTTAGGTCCTTTTGGTGTAAACCATGGGGTGGAACTTCACTCAGATGTGACAGAGTATGCGAAGCAGAAACTGGACTTTTTCATCAGAACAAGCGAAAGCTTCGACAAGTAAGA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911398 132 + 22939663 TTTTCTTATTCTC-AAACCTATAGGACCTTTTGGTGTAAATCATGGGGTGGAACTTCATTCAGATGTGATCGAGTATGCAAAGCAGAAACTGGATTTTTTCATCAGAACAAGCGAAAGTTTTGACAAGTAAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181844372 132 + 182113224 -CTTTGTTTTCTCAAACCTCTCAGGTCCTTTCGGCGTGAACCACGGGGTGGAGCTTCATTCAGATGTCACTGAGTACGCGAAGCAGAAACTGGATGTCTTCATCAGAACCAGCGACAGCTTTGACAAGTACGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47657808 133 + 47698779 TTTTCTTATTCTGAAACATTTTAGGTCCTTTTGGTGTGAACCACGGGGTTGAACTCCATTCAGATGTAATAGAATATGCAAGGCAGAAGCTGGACTTCTTTATTAGAACCAGCGACAGCTTTGACAAGTAAGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 331027 130 - 397369 TTTTCTTATT---AAACCTTTTAGGTCCTTTTGGTGTAAATCATGGGGTGGAACTTCATTCAGACGTGATAGAGTATGCAAAACAGAAACTGGACTTCTTCATCAAAACAAGTGATAGCTTTGACAAGTAAGA i dasNov3.JH569290 C 0 C 0 a score=384207.000000 s hg38.chr20_KI270870v1_alt 173128 30 + 183433 TGAAATACTATCCATTGGCTCAGATGATGT s panTro5.chr20 66508556 30 + 66533130 TGAAATACTATCCATTGGCTCAGATAATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175768 30 + 62195757 TGAAATACTATCCATTGGCTCAGATAATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562208 30 - 578057 TGAAATACTATCCATTGGCTCAGATAATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083678 30 - 110113093 TGAAATACTATCCATTGGCTCAGATCATGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823461 30 - 92844088 TGAAATACTATCCATTGGCTCAGATAATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489130 30 + 96509753 TGAAATACTATCCATTGGCTCAGATAATGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959101 30 - 16982598 TGAAATACTATCCATTGGCTCAGATAATGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761037 30 - 3785965 TGAAATACTATCCATTGGCTCAGATAATGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351032 30 - 90373283 TGAAGTACTATCCACTGGCTCAGATAATGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151794 30 - 179258 TGAAATACTATCCATTGGCTCAGATAATGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621328 30 - 5823884 TGAAATACTATCCATTGGCGCAGATAATGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58178194 30 + 159171411 TGAAATACTATCCATTGGGTCAGAGAATGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342170 30 + 16356641 TGAAATACTATCTATTGGGTCAGAGAACGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1216347 30 + 1231380 TGAAATAATATCCATTGGGTCAGAGAATGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2742337 30 + 11732439 TGAAATACTATCCATTGGGTCAGAGGATGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1916955 30 - 2029793 TCAGATTATGTCTGTTGGGTCAGAGGGTGT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911530 30 + 22939663 TCAAATTATGTCCATTGGGTCAGAGGGTGT i otoGar3.GL873542 C 0 I 130 s mm10.chr2 181844504 30 + 182113224 CCAGACGCTATTTATTAGTTCAAACAAAGG i mm10.chr2 C 0 I 4 s canFam3.chr24 47657941 25 + 47698779 TCAAATACTACCC-TTGGAT----TGCTGT i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 331157 30 - 397369 TTAAATACTATATATTAGCTCAAAGGATAT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56926928 122 + 57149010 I a score=294446.000000 s hg38.chr20_KI270870v1_alt 173158 23 + 183433 GAACTGTAATTTTACAAAGTTTT s panTro5.chr20 66508586 23 + 66533130 GAATTGTAATTTTACAAAGTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175798 23 + 62195757 GAATTGTAATTTTACAAAGTTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562238 23 - 578057 GAATTGTAATTTTACAAAGTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083708 23 - 110113093 GAATTATAATTTTACAAAGTTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823491 23 - 92844088 GAATTATAATTTTACAAAGTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489160 23 + 96509753 GAATTATAATTTTACAAAGTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959131 23 - 16982598 GAATTATAATTTTACAAAGTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761067 23 - 3785965 GAATTATAATTTTACAAAGTTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351062 23 - 90373283 GAATTATAATTTTACAAAGTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151824 23 - 179258 GAATTATAATTTTACAAAGTTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621358 23 - 5823884 GAATTATAATTTTACAAAGTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58178224 23 + 159171411 GAATTACAGTTTTACAAACtttt i calJac3.chr5 C 0 I 656 s saiBol1.JH378156 16342200 23 + 16356641 GAATTATAATTTTACAAACTTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1216377 23 + 1231380 GAATTATAATTTTACAAACTTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2742367 23 + 11732439 GAATTATAATTTTACAAAGTTTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1916985 23 - 2029793 GAATTATAATTTAATAAACTTTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911690 22 + 22939663 GAATTA-AATGTAACAGACATTT i otoGar3.GL873542 I 130 C 0 s mm10.chr2 181844538 19 + 182113224 TAATTATATATAGAAAAAG---- i mm10.chr2 I 4 C 0 s canFam3.chr24 47657968 20 + 47698779 GAATTACAATTT---AAAATTTT i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 331187 21 - 397369 AAATTGTAATGTAACAAACTT-- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56926928 122 + 57149010 I a score=166790.000000 s hg38.chr20_KI270870v1_alt 173181 13 + 183433 GATCAGATAGAAA s panTro5.chr20 66508609 13 + 66533130 GATCAGATAGAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175821 13 + 62195757 GATCAGATAGAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562261 13 - 578057 GATCAGATAGAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083731 13 - 110113093 GATCAGATAGAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823514 13 - 92844088 GCTCAGATAGAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489183 13 + 96509753 GCTCAGATAGAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959154 13 - 16982598 GCTCAGATAGAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761090 13 - 3785965 GCTCAGATAGAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351085 13 - 90373283 GCTCAGATAGAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151847 13 - 179258 GCTCAGATAGAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621381 13 - 5823884 GCTCAGATAGAAA i colAng1.NW_012114444v1 C 0 C 0 s saiBol1.JH378156 16342223 13 + 16356641 GATCAGATAGAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1216400 13 + 1231380 GATCAGATAGAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2742390 13 + 11732439 GATCAGATAGAAA i aotNan1.NW_018500483v1 C 0 I 508 s proCoq1.NW_012150197v1 1917008 13 - 2029793 GATCAGATAGGAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911712 13 + 22939663 GATCAGGTAGTAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181844557 11 + 182113224 --CCAGTTTATTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47657988 13 + 47698779 TATTAGATAGGAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 331208 13 - 397369 GGTCAGATGGAAA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56926928 122 + 57149010 I e calJac3.chr5 58178247 656 + 159171411 I a score=36638.000000 s hg38.chr20_KI270870v1_alt 173194 4 + 183433 GAAA s panTro5.chr20 66508622 4 + 66533130 GAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175834 4 + 62195757 GAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562274 4 - 578057 GAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083744 4 - 110113093 TCAG i nomLeu3.chr13 C 0 I 11 s rheMac8.chr10 92823527 4 - 92844088 GAAA i rheMac8.chr10 C 0 I 15 s macFas5.chr10 96489196 4 + 96509753 GAAA i macFas5.chr10 C 0 I 15 s macNem1.NW_012014244v1 16959167 4 - 16982598 GAAA i macNem1.NW_012014244v1 C 0 I 15 s cerAty1.NW_012001373v1 3761103 4 - 3785965 GAAA i cerAty1.NW_012001373v1 C 0 I 15 s chlSab2.chr2 90351098 4 - 90373283 GAAA i chlSab2.chr2 C 0 I 15 s manLeu1.NW_012101652v1 151860 4 - 179258 GAAA i manLeu1.NW_012101652v1 C 0 I 15 s colAng1.NW_012114444v1 5621394 4 - 5823884 GAAA i colAng1.NW_012114444v1 C 0 I 15 s saiBol1.JH378156 16342236 4 + 16356641 TCAG i saiBol1.JH378156 C 0 I 11 s cebCap1.NW_016107870v1 1216413 4 + 1231380 GAAA i cebCap1.NW_016107870v1 C 0 C 0 s proCoq1.NW_012150197v1 1917021 4 - 2029793 GAAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911725 4 + 22939663 GAAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181844568 4 + 182113224 GTAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47658001 3 + 47698779 -AAA i canFam3.chr24 C 0 I 15 s dasNov3.JH569290 331221 4 - 397369 GAAA i dasNov3.JH569290 C 0 I 15 e micMur3.chr18 56926928 122 + 57149010 I e calJac3.chr5 58178247 656 + 159171411 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=51262.000000 s hg38.chr20_KI270870v1_alt 173198 3 + 183433 TCA s panTro5.chr20 66508626 3 + 66533130 TCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175838 3 + 62195757 TCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562278 3 - 578057 TCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083759 3 - 110113093 TCA i nomLeu3.chr13 I 11 C 0 s rheMac8.chr10 92823546 3 - 92844088 TCA i rheMac8.chr10 I 15 C 0 s macFas5.chr10 96489215 3 + 96509753 TCA i macFas5.chr10 I 15 C 0 s macNem1.NW_012014244v1 16959186 3 - 16982598 TCA i macNem1.NW_012014244v1 I 15 C 0 s cerAty1.NW_012001373v1 3761122 3 - 3785965 TCA i cerAty1.NW_012001373v1 I 15 C 0 s chlSab2.chr2 90351117 3 - 90373283 TCA i chlSab2.chr2 I 15 C 0 s manLeu1.NW_012101652v1 151879 3 - 179258 TCA i manLeu1.NW_012101652v1 I 15 C 0 s colAng1.NW_012114444v1 5621413 3 - 5823884 TCA i colAng1.NW_012114444v1 I 15 C 0 s calJac3.chr5 58178903 3 + 159171411 TCA i calJac3.chr5 I 656 C 0 s saiBol1.JH378156 16342251 3 + 16356641 TCA i saiBol1.JH378156 I 11 C 0 s cebCap1.NW_016107870v1 1216417 3 + 1231380 TCA i cebCap1.NW_016107870v1 C 0 I 516 s proCoq1.NW_012150197v1 1917025 3 - 2029793 TCA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911729 3 + 22939663 TCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181844572 3 + 182113224 CCA i mm10.chr2 C 0 C 0 s canFam3.chr24 47658019 3 + 47698779 TCA i canFam3.chr24 I 15 C 0 s dasNov3.JH569290 331240 3 - 397369 TCA i dasNov3.JH569290 I 15 C 0 e micMur3.chr18 56926928 122 + 57149010 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=-2415.000000 s hg38.chr20_KI270870v1_alt 173201 1 + 183433 T s panTro5.chr20 66508629 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175841 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562281 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083762 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823549 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489218 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959189 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761125 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351120 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151882 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621416 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58178906 1 + 159171411 T i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342254 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s proCoq1.NW_012150197v1 1917028 1 - 2029793 T i proCoq1.NW_012150197v1 C 0 I 29 s otoGar3.GL873542 22911732 1 + 22939663 T i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181844575 1 + 182113224 T i mm10.chr2 C 0 C 0 s canFam3.chr24 47658022 1 + 47698779 T i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 331243 1 - 397369 T i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56926928 122 + 57149010 I e cebCap1.NW_016107870v1 1216420 516 + 1231380 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=130504.000000 s hg38.chr20_KI270870v1_alt 173202 15 + 183433 GTGGTAGGAAACATA s panTro5.chr20 66508630 15 + 66533130 GTGGTAGGAAACATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175842 15 + 62195757 GTGGTAGGAAACATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562282 15 - 578057 GTGGTAGCAAACGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083763 15 - 110113093 GTGGTAGCAAACATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823550 15 - 92844088 GTGGTAGCAAACGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489219 15 + 96509753 GTGGTAGCAAACGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959190 15 - 16982598 GTGGTAGCAAACGTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761126 15 - 3785965 GTGGTAGCAAACGTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351121 15 - 90373283 GTGGTAGCAAATGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151883 15 - 179258 GTGGTAGCAAACGTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621417 15 - 5823884 GTGGTAGCAAACGTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58178907 15 + 159171411 GTGCCAGCAAGCATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342255 15 + 16356641 GTGCCAGCAAACATG i saiBol1.JH378156 C 0 C 0 s otoGar3.GL873542 22911734 15 + 22939663 GTGTTAATGCTCACA i otoGar3.GL873542 I 1 I 14 s mm10.chr2 181844576 15 + 182113224 ATGCCAGAAAACATA i mm10.chr2 C 0 C 0 s canFam3.chr24 47658023 15 + 47698779 ATACTAGCAAGCATG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 331244 15 - 397369 ATGCCAGCAAAATTA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1917029 29 - 2029793 I e micMur3.chr18 56926928 122 + 57149010 I e cebCap1.NW_016107870v1 1216420 516 + 1231380 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=51956.000000 s hg38.chr20_KI270870v1_alt 173217 5 + 183433 ATTAA s panTro5.chr20 66508645 5 + 66533130 ATTAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175857 5 + 62195757 ATTAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562297 5 - 578057 ATTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083778 5 - 110113093 ATTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823565 5 - 92844088 AATAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489234 5 + 96509753 AATAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959205 5 - 16982598 AATAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761141 5 - 3785965 AATAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351136 5 - 90373283 AATAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151898 5 - 179258 AATAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621432 5 - 5823884 ATTAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58178922 5 + 159171411 ATTAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342270 5 + 16356641 ATTAA i saiBol1.JH378156 C 0 I 339 s proCoq1.NW_012150197v1 1917058 5 - 2029793 ATTAA i proCoq1.NW_012150197v1 I 29 C 0 s otoGar3.GL873542 22911763 5 + 22939663 ATTCA i otoGar3.GL873542 I 14 C 0 s mm10.chr2 181844591 5 + 182113224 GTTAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47658038 5 + 47698779 ATTCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 331259 5 - 397369 ATTAA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56926928 122 + 57149010 I e cebCap1.NW_016107870v1 1216420 516 + 1231380 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=130522.000000 s hg38.chr20_KI270870v1_alt 173222 12 + 183433 ACTGTGGTGGGA------ s panTro5.chr20 66508650 12 + 66533130 ACTGTGGTGGGA------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175862 12 + 62195757 ACTGTGGTGGGA------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562302 12 - 578057 ACTGTGGTAGGA------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083783 12 - 110113093 ACTGTGGCAGGA------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823570 12 - 92844088 ACTGTGGTAGGA------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489239 12 + 96509753 ACTGTGGTAGGA------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959210 12 - 16982598 ACTGTGGTAGGA------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761146 12 - 3785965 ACTGTGGTAGGA------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351141 12 - 90373283 ACTGTGGTAGGA------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151903 12 - 179258 ACTGTGGTAGGA------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621437 12 - 5823884 ACTGTGGTAGGA------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58178927 12 + 159171411 ACTATGGTAGGA------ i calJac3.chr5 C 0 I 333 s saiBol1.JH378156 16342614 12 + 16356641 ACTGTGCTAGGA------ i saiBol1.JH378156 I 339 I 2 s proCoq1.NW_012150197v1 1917063 12 - 2029793 ACTTTGGTAGGG------ i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911768 12 + 22939663 ACTTTGGTAGGG------ i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181844596 12 + 182113224 AGTGTGGTTGGA------ i mm10.chr2 C 0 C 0 s canFam3.chr24 47658043 12 + 47698779 GCTTTGGCAGGA------ i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 331264 16 - 397369 AC--TGATAGGGTGAACA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56926928 122 + 57149010 I e cebCap1.NW_016107870v1 1216420 516 + 1231380 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=120913.000000 s hg38.chr20_KI270870v1_alt 173234 10 + 183433 TGATTCTATG s panTro5.chr20 66508662 10 + 66533130 TGATTCTATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175874 10 + 62195757 TGATTCTATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562314 10 - 578057 TGATTCTATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110083795 10 - 110113093 TGATTCTATG i nomLeu3.chr13 C 0 I 303 s rheMac8.chr10 92823582 10 - 92844088 TGATCCTATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489251 10 + 96509753 TGATCCTATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959222 10 - 16982598 TGATCCTATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761158 10 - 3785965 TGATCCTATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351153 10 - 90373283 TGATCCTATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151915 10 - 179258 TGATCCTATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621449 10 - 5823884 TGATCCTATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179272 10 + 159171411 TGATGCCATG i calJac3.chr5 I 333 C 0 s saiBol1.JH378156 16342628 10 + 16356641 TGATGCCATG i saiBol1.JH378156 I 2 C 0 s micMur3.chr18 56927050 10 + 57149010 TGATCCTATG i micMur3.chr18 I 122 C 0 s proCoq1.NW_012150197v1 1917075 10 - 2029793 TGATCCTATG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911780 10 + 22939663 CGATCTTATA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181844608 10 + 182113224 TGATCCTAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47658055 9 + 47698779 -GAACCAGGG i canFam3.chr24 C 0 I 5 s dasNov3.JH569290 331280 10 - 397369 TGGGGCTATA i dasNov3.JH569290 C 0 C 0 e cebCap1.NW_016107870v1 1216420 516 + 1231380 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=17290.000000 s hg38.chr20_KI270870v1_alt 173244 1 + 183433 T s panTro5.chr20 66508672 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175884 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562324 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084108 1 - 110113093 T i nomLeu3.chr13 I 303 C 0 s rheMac8.chr10 92823592 1 - 92844088 T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489261 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959232 1 - 16982598 T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761168 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351163 1 - 90373283 T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151925 1 - 179258 T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621459 1 - 5823884 T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179282 1 + 159171411 T i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342638 1 + 16356641 T i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56927060 1 + 57149010 T i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1917085 1 - 2029793 T i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22911790 1 + 22939663 T i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181844618 1 + 182113224 T i mm10.chr2 C 0 I 846 s canFam3.chr24 47658069 1 + 47698779 T i canFam3.chr24 I 5 I 4 s dasNov3.JH569290 331290 1 - 397369 T i dasNov3.JH569290 C 0 C 0 e cebCap1.NW_016107870v1 1216420 516 + 1231380 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=275857.000000 s hg38.chr20_KI270870v1_alt 173245 35 + 183433 GCCTGTTCTAATT-T------------TCAGAAAAGA--TT------CTGTG-TTTT s panTro5.chr20 66508673 35 + 66533130 TCCTGTTCTAATT-T------------TCAGAAAAGA--TT------CTGTG-TTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175885 35 + 62195757 TCCTGTTCTAATT-T------------TCAGAAAAGA--TT------CTGTG-TTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562325 35 - 578057 GCCTGTTCTAATT-T------------TCAAAAAAGA--TT------CTGTG-TTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084109 35 - 110113093 GCCTGTTGTAATT-T------------CTAAAAAAGG--TT------GTGTG-TTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823593 36 - 92844088 GCCCGTTCTAAGT-T------------TTAAAAAATA--TT------CTGTGTTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489262 36 + 96509753 GCCCGTTCTAAGT-T------------TTAAAAAATA--TT------CTGTGTTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959233 36 - 16982598 GCCCGTTCTAAGT-T------------TTAAAAAATA--TT------CTGTGTTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761169 36 - 3785965 GCCCGTTCTAAGT-T------------TTAAAAAATA--TT------CTGTGTTTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351164 36 - 90373283 GTCCGTTCTAAGT-T------------TTGAAAAATA--TT------CTGTGTTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151926 36 - 179258 GCCCGTTCTAAGT-T------------TTAAAAAATA--TT------CTGTGTTTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621460 36 - 5823884 GCCTGTTCTAAGT-T------------TTCAAAAATA--TT------CTGTGTTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179283 38 + 159171411 GCCTGTTCTAATT-T------------AAAAAAAAAAAATT------CTGTGTATTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342639 34 + 16356641 GCCTCTTCTAATT-T------------TTTTAAAAAA----------TTCTGTTTTT i saiBol1.JH378156 C 0 C 0 s micMur3.chr18 56927061 35 + 57149010 GTCTATTCTAATT-T------------TCAAAAAATA--TT------CTGTATTTT- i micMur3.chr18 C 0 I 174 s proCoq1.NW_012150197v1 1917086 35 - 2029793 GGCAGTTCTAATT-T------------TCAAAAAATA--TT------CTGTGTTTT- i proCoq1.NW_012150197v1 C 0 I 113 s otoGar3.GL873542 22911791 35 + 22939663 TTCTGTTCTAATT-T------------TCAAAAAATA--TT------CTGTGTTTT- i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47658074 37 + 47698779 AGCTGTTCtaattat------------tttttaaata--tt------ttGTGCTTTT i canFam3.chr24 I 4 C 0 s dasNov3.JH569290 331291 53 - 397369 GCCTTTTCTTTTT-TCGTATTCTTTTCTAAGAAAAAA--ATAGATACATGTGTTTT- i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181844619 846 + 182113224 I e cebCap1.NW_016107870v1 1216420 516 + 1231380 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=228000.000000 s hg38.chr20_KI270870v1_alt 173280 33 + 183433 GAGGGTTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACAT------------------ s panTro5.chr20 66508708 33 + 66533130 GAGGGTTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACGT------------------ i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175920 33 + 62195757 GAGGGTTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACAT------------------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562360 33 - 578057 GAGGGTTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACAT------------------ i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084144 33 - 110113093 GAGGGTTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACGT------------------ i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823629 33 - 92844088 GAGGATTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACCT------------------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489298 33 + 96509753 GAGGATTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACCT------------------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959269 33 - 16982598 GAGGATTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACCT------------------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761205 33 - 3785965 GAGGATTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACCT------------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351200 33 - 90373283 GAGGATTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACCT------------------ i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151962 33 - 179258 GAGGATTTTAGG-------------GTATTT---------CAA-------------------ACTGTTACACCT------------------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621496 33 - 5823884 GAGGGTTTTAGG-------------GTATTT---------CAA-------------------ACTGTTCCACCT------------------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179321 32 + 159171411 GAGGGTTTTAGG-------------TT-TTT---------CTA-------------------AATGTTACACCT------------------ i calJac3.chr5 C 0 I 340 s saiBol1.JH378156 16342673 32 + 16356641 GAGGGTTTTAGG-------------TT-TTT---------CTA-------------------AATGTTATACCT------------------ i saiBol1.JH378156 C 0 I 40 s otoGar3.GL873542 22911827 55 + 22939663 AACAATTTTAGGTTTTTGTGATCATGTACTTATATAAAGGCAA-------------------TTTGTCATGAAC------------------ i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47658111 33 + 47698779 GAGGGCTTCAGG-------------TTCTTT---------TTA-------------------ACTATGATACCA------------------ i canFam3.chr24 C 0 I 37 s dasNov3.JH569290 331344 70 - 397369 AAGGGATTTAGG-------------TTTTTG---------TAATTGATATCTAGGCAAAGGTAATTTTTCACCAATATAATAATAGAAGAAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1917121 113 - 2029793 I e mm10.chr2 181844619 846 + 182113224 I e micMur3.chr18 56927096 174 + 57149010 I e cebCap1.NW_016107870v1 1216420 516 + 1231380 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=73373.000000 s hg38.chr20_KI270870v1_alt 173313 14 + 183433 ACATAAGGT---------------------------------------GTTCA- s panTro5.chr20 66508741 14 + 66533130 ACATAAGGT---------------------------------------GTTCA- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175953 14 + 62195757 ACATAAGGT---------------------------------------GTTCA- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562393 14 - 578057 ACATAAGGT---------------------------------------GTTCA- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084177 14 - 110113093 ACATAAGGT---------------------------------------GTTCA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823662 53 - 92844088 ACATAAGGTAATTTCTGACCAATATAAGAATAGAAGAAAACAGAAAATGTTCA- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489331 53 + 96509753 ACATAAGGTAATTTCTGACCAATATAAGAATAGAAGAAAACAGAAAATGTTCA- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959302 53 - 16982598 ACATAAGGTAATTTCTGACCAATATAAGAATAGAAGAAAACAGAAAATGTTCA- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761238 53 - 3785965 ACATAAGGTAATTTCTGACCAATATAAGAATAGAAGAAAACAGAAAATGTTCA- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351233 53 - 90373283 ACATAAGGTAATTTCTGACCAATATGAGAATAGAAGAAAACAGAAAATGTTCA- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 151995 53 - 179258 ACATAAGGTAATTTCTGACCAATATAAGAATAGAAGAAAACAGAAAATGTTCA- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621529 53 - 5823884 ACATAAGGTAACTTCTGACCCATATAAGAACAGAAGAAAACAGAAACGGTTCG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179693 14 + 159171411 ACACAAAAT---------------------------------------GTTCA- i calJac3.chr5 I 340 I 1 s saiBol1.JH378156 16342745 14 + 16356641 ACACAAAAT---------------------------------------GTTCA- i saiBol1.JH378156 I 40 I 1 s otoGar3.GL873542 22911882 23 + 22939663 --------------------------ATAATAGAAGAAAACAAAAT--GTT--- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47658181 14 + 47698779 AAATAGAAT---------------------------------------GTTCA- i canFam3.chr24 I 37 C 0 s dasNov3.JH569290 331414 13 - 397369 ---------------------------------------ACAGAAA--GTTTAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1917121 113 - 2029793 I e mm10.chr2 181844619 846 + 182113224 I e micMur3.chr18 56927096 174 + 57149010 I e cebCap1.NW_016107870v1 1216420 516 + 1231380 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=25789.000000 s hg38.chr20_KI270870v1_alt 173327 2 + 183433 TT s panTro5.chr20 66508755 2 + 66533130 TT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175967 2 + 62195757 TT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562407 2 - 578057 TT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084191 2 - 110113093 TT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823715 2 - 92844088 TT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489384 2 + 96509753 TT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959355 2 - 16982598 TT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761291 2 - 3785965 TT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351286 2 - 90373283 TT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152048 2 - 179258 TT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621582 2 - 5823884 TT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179708 2 + 159171411 TT i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16342760 2 + 16356641 TT i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1216936 2 + 1231380 TT i cebCap1.NW_016107870v1 I 516 C 0 s otoGar3.GL873542 22911905 1 + 22939663 -T i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47658195 2 + 47698779 TT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 331427 2 - 397369 TT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1917121 113 - 2029793 I e mm10.chr2 181844619 846 + 182113224 I e micMur3.chr18 56927096 174 + 57149010 I e aotNan1.NW_018500483v1 2742403 508 + 11732439 I a score=289205.000000 s hg38.chr20_KI270870v1_alt 173329 26 + 183433 TGCTCAATATTCATGTTTCCTGTTGA s panTro5.chr20 66508757 26 + 66533130 TGCTCAATATTCATGTTTCCTGTTGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175969 26 + 62195757 TGCTCAATATTCATGTTTCCTGTTGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562409 26 - 578057 TGCTCAATATTCATGTTTCCTATTTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084193 26 - 110113093 TGCTCAGTATTCATGCTTCCTATGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823717 26 - 92844088 TGCTCAGTATTCATGTTTCCTATTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489386 26 + 96509753 TGCTCAGTATTCATGTTTCCTATTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959357 26 - 16982598 TGCTCAGTATTCATGTTTCCTATTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761293 26 - 3785965 TGCTCAGTATTCATGTTTCCTATTTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351288 26 - 90373283 TGCTCAGTATTCATGTTTCCTATTTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152050 26 - 179258 TGCTCAGTATTCATGTTTCCTATTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621584 26 - 5823884 TGCTCAGTGTTCGTGTTTCCTATTTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179710 26 + 159171411 TGCTCAATTTTCACGTTTCCTATTTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342762 26 + 16356641 TGCTCAATTTTCATGTTTCCTATTTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1216938 26 + 1231380 TGCTCAATTTTCATGTTTCCTCTTTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2742911 26 + 11732439 TGCTCAATTTTCATGTTTCCTATTTA i aotNan1.NW_018500483v1 I 508 C 0 s otoGar3.GL873542 22911906 19 + 22939663 TGCTGAATTTTCATACTTT------- i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47658198 26 + 47698779 TACTCAATTTTCATGTTTCCAACACA i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 331429 25 - 397369 TGCTTAATTTGCATGTTTCCAGTAT- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1917121 113 - 2029793 I e mm10.chr2 181844619 846 + 182113224 I e micMur3.chr18 56927096 174 + 57149010 I a score=825028.000000 s hg38.chr20_KI270870v1_alt 173355 67 + 183433 AGACAACTGTTTACCACCTAGTTTTTCCTAAAATAAAATT-GTTGCATTT-GTCTCTAAACAGTATATG s panTro5.chr20 66508783 67 + 66533130 AGACAACTGTTTACCACCTAGTTTTTCCTAAAATAAAATT-GTTGCATTT-GTCTCTAAACAGTATATA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62175995 67 + 62195757 AGACAACTGTTTACCACCTAGTTTTTCCTAAAATAAAATT-GTTGCATTT-GTCTCTAAACAGTATATA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562435 67 - 578057 AGACAACTGTTTACCACCTAATTTTTCCTAAAATGAAATT-GTTGCGTTT-GTCTCTAAACAGTATATA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084219 67 - 110113093 AGACAACTGTTTACCACCTAATTTTTCCTCAAATAAAATT-GTTGCATTT-GTCTCTAAACAGTGTATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823743 67 - 92844088 AGACAACTTTTTACCACCTAATTTTTCCTAAAATGAAATT-GTTGCATTT-TTCTTTAAACAGTATATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489412 67 + 96509753 AGACAACTTTTTACCACCTAATTTTTCCTAAAATGAAATT-GTTGCATTT-TTCTTTAAACAGTATATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959383 67 - 16982598 AGACAACTTTTTACCACCTAATTTTTCCTAAAATGAAATT-GTTGCATTT-TTCTTTAAACAGTATATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761319 67 - 3785965 AGACAACTTTTTACCACCTAATTTTTCCTAAAATGAAATT-GTTGCATTT-TTCTTTAAACAGTATATA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351314 67 - 90373283 AGACAAATTGTTACCACCTAATTTTTCCTAAAATGAAATT-GTTGCATTT-TTCTTTAAACAGTATATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152076 67 - 179258 AGACAACTTTTTACCACCTAATTTTTCCTAAAATGAAATT-GTTGCATTT-TTCTTTAAACAGTATATA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621610 61 - 5823884 AGACGACTTGTTACCACCTAATTTTTCCTAAAATGAAATT-TTTGCACTT-TTCTTTAAACAG------ i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179736 66 + 159171411 AGATAACTTTTTACCA-CTAATCGTTTCTAAAATAAAATT-GTTGCATTT-GTCTCTAAACAGTATATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342788 67 + 16356641 AGATAACTTTTTACCACCTCATCGTTTCTGAAATAAAATT-GTTGCATTT-GTCTCCAAACAGTATATG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1216964 64 + 1231380 AGATAACTTTTTACCACC---TCGTTTCTGAAATAAAATC-GTTGCATTT-GTCTCCAAACAGTATATG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2742937 67 + 11732439 AGATAACTTTTTACTACCCAATTGTTTCTAAAATAAAATT-GTTGCATTT-GTCTCTAAACAGTATGTG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1917234 67 - 2029793 AGACAACCTTTTATCACCTAATTGTTTCTAATATAAAATT-ATTCCATTA-GTCTCAAAACAATATATG i proCoq1.NW_012150197v1 I 113 C 0 s otoGar3.GL873542 22911925 60 + 22939663 ---------TTTATTACCTAATTGTTTCTAAAATAAAGTTAAGTGCATTGTGTCTCTAAACAGTATATA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47658224 66 + 47698779 -GGAAACATTTTATCACCTAATAGTTTCAAAAACAGAATT-GTTGGATTT-GTCTTTAAACAGTATATA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 331454 66 - 397369 AGACAAATTTATATCAGCTAGTTATTTCTAAAATAAAATG-GCTGCTTTT-GTCT-TAAACAATATATA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181844619 846 + 182113224 I e micMur3.chr18 56927096 174 + 57149010 I a score=932000.000000 s hg38.chr20_KI270870v1_alt 173422 63 + 183433 TAA--CTAGCTTTTGCCATTTTAAAAGAAGGCATTAAAGTTCTTATTTTAGGGATTAAAATTTTT s panTro5.chr20 66508850 63 + 66533130 TAA--CTAGCTTTTGCCATTTTAAAATAAGGCATTAAAGTTCTTATTTTAGGGATTAAAATTTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176062 63 + 62195757 TAA--CTAGCTTTTGCCATTTTAAAATAAGGCATTAAAGTTCTTATTTTAGGGATTAAAATTTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562502 63 - 578057 TAA--CTAGCTTTTGCCATTTCAAAATAAGGCATTAAAGTTCTTATTTTAGGGATTAAAATTTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084286 65 - 110113093 TAAAGCAAGCTTTTGCCATTTTAAAAGAAGGCATTAAAGTTCTTATTTTAGGGATTAAACTTTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823810 63 - 92844088 TAA--CTAGCTTTTGCCATTTTAAAATAAGACGTTAACGTTCTTATTTTAGGGATTAAAATTTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489479 63 + 96509753 TAA--CTAGCTTTTGCCATTTTAAAATAAGACGTTAACGTTCTTATTTTAGGGATTAAAATTTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959450 63 - 16982598 TAA--CTAGCTTTTGCCATTTTAAAATAAGACGTTAAAGTTCTTATTTTAGGGATTAAAATTTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761386 63 - 3785965 TAA--CTAGCTTTTGCCATTTTAAAATAAGACGTTAAAGTTCTTATTTTAGGGATTAAAATTTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351381 63 - 90373283 TAA--CTAGCTTTTGCCATTTTAAAATAAGACGTTAAAGCTCTTATTTTAGGGATTAAAATTTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152143 63 - 179258 TAA--CTAGCTTTTGCCATTTTAAAATAAGACGTTAAAGTTCTTATTTTAGGGATTAAAATTTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621671 54 - 5823884 -----------TTTGCCATTTTAAAATAAGACGTTAAAGTTCTTATTTTGGGGATTAAAATTTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179802 63 + 159171411 TAA--CTAGCTTTTGCCATTTTAAAATAAGGCATTACAGTTCTTATTTTAGGGATTAAAATTTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342855 63 + 16356641 TGA--CTAGCGTTTGCCATTTTAAAATAAGGCATTACAGGTTTTGTTTTAGGGATTAAAATTTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217028 63 + 1231380 TAA--CTAGCTTTTGCCATTTTAAAATAAGGCATTACAGTTCTTATTTGAGGGATTAAAATTTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743004 63 + 11732439 TAA--CTAGCTTTTGCCATTTTAAAATAAGGCATTACAGTTCTTATTTTAGGGATTAAAATTTTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56927270 63 + 57149010 TAA--CTAGCTCTTGCCATTTTTAAACAAGACATTAAAATTCTTATTTTAGGGATTAAAAATTTT i micMur3.chr18 I 174 I 256 s proCoq1.NW_012150197v1 1917301 63 - 2029793 TAA--CTAGCTCTTGCCATTTTTAAGTAAGACATTAAAGTTCTTATTTTAGGGATTAAAATTTTT i proCoq1.NW_012150197v1 C 0 I 218 s otoGar3.GL873542 22911985 58 + 22939663 TGA--TGAGGT-TTGCCATTTTAAAATTAGACATGCAAATTC----TTTAGGGATTAAAATTTTT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47658290 63 + 47698779 TAA--CTACCTCTTGCCATTTTTATTTAAGGCATTAAAATTCTTATTTTGGGGTTTAACATTTTT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 331520 48 - 397369 TAA--CTAG--------------AAATAAGGCATTA-AGTTTTCATTTTAGGGATTAAATTTTTT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181844619 846 + 182113224 I a score=222178.000000 s hg38.chr20_KI270870v1_alt 173485 18 + 183433 AGAAACACCAAGTGCAGT s panTro5.chr20 66508913 18 + 66533130 AGAAACACCAAGTGCAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176125 18 + 62195757 AGAAACACCAAGTGCAGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562565 18 - 578057 AGAAACACCAAGTGCAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084351 18 - 110113093 AGAAACACCAAGTGCAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823873 18 - 92844088 AGAAACACCAAGTTCAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489542 18 + 96509753 AGAAACACCAAGTGCAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959513 18 - 16982598 AGAAACACCAAGTGCAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761449 18 - 3785965 AGAAACACCAAGTGCAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351444 18 - 90373283 AGAAACACCAAGTGCAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152206 18 - 179258 GGAAACACCAAGTGCAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621725 18 - 5823884 AGAAACACCAAGTGCAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179865 18 + 159171411 AGAAACCCCAAACGTAGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342918 18 + 16356641 AGAAACCCCAAATGCAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217091 18 + 1231380 AGAAACCCCAAATGCAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743067 17 + 11732439 AGAAACCCCAAATG-AGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22912043 18 + 22939663 AGAAAAACCAAAGGTATT i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47658354 18 + 47698779 AGAAATACCAAGTGTAGT i canFam3.chr24 I 1 I 389 s dasNov3.JH569290 331568 18 - 397369 AGAAAAACCGAATGTATT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1917364 218 - 2029793 I e mm10.chr2 181844619 846 + 182113224 I e micMur3.chr18 56927333 256 + 57149010 I a score=657830.000000 s hg38.chr20_KI270870v1_alt 173503 79 + 183433 TTCACCACCCCCACATCTCACTCATTGTGTAGTATTAATAGATCTTACATAAGATGATAAGAAGATGACAGAGACAGCA-- s panTro5.chr20 66508931 76 + 66533130 TTCACCACCCCCACATCTCACTC---GTGTAGTATTAATAGATCTTACATAAGATGATAAGAAGATGACAGAGACAGCA-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176143 76 + 62195757 TTCACCACCCCCACATCTCACTC---GTGTAGTATTAATAGATCTTACATAAGATGATAAGAAGATGACAGAGACAGCA-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562583 79 - 578057 TTCGCCACCCCCACATCTCACTCATTGTGTGGTATTAATAGATCTTACATAAGATGATAAGAAGATGACAGAGATAACA-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084369 79 - 110113093 TTCACCATCCCCACATCTCACTTATTGCGTAGTACTAATAGATCTTACATAAGATGGTAAGAAGATGACAGAGACAACA-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823891 74 - 92844088 TTCACCACCCCCACATCTCACTCATTGTGT-----TAATAGATCTCACATAAGATGATAGGAAGATGACACAGACAACA-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489560 74 + 96509753 TTCACCACCCCCACATCTCACTCATTGTGT-----TAATAGATCTCACATAAGATGATAGGAAGATGACACAGACAACA-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959531 74 - 16982598 TTCACCACCCCCACATCTCACTCATTGTGT-----TAATGGATCTCACATAAGATGATAGGAAGATGACACAGACAACA-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761467 74 - 3785965 TTCACCACCCCCACATCTCACTCATTGTGT-----TAATAGATCTCACATAAGATGATAGGAAGATGACACAGACAACA-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351462 74 - 90373283 TTCACCACCCCCACATCTCACTCATTGTGT-----TAATAGATCTCACATAAGATGATAGGAAGATGACACAGACAACA-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152224 74 - 179258 TTCACCACCCCCACATCTCACTCACTGTGT-----TAATAGATCTCACATAAGATGATAGGAAGATGACACAGACAACA-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621743 74 - 5823884 TTCACCACCCCCACATCTCACTCATTGTGT-----TACTAGATCTCACATAAGATGATAGGAAGATGACAGAGACAACA-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179883 73 + 159171411 TTTGCCACCCCCACATCTCACTC---GTGTAGTATTAATAGATCTTACACAAGATGATAAGA---TGACAAAGACAATA-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16342936 79 + 16356641 TTCACCACCCCCACATCTCACTCATTGTGTGGTGTTAATAGATTTTATACAAGATGCTAAGAAGGTGACAAAGACAACA-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217109 79 + 1231380 TTCACCACCCCCACATCTCACTCATTGTGTGGTATTAATAGATCTTACACAAGATGATAAGAAGATGACAAAGACAGCG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743084 62 + 11732439 TTCGCCACCCGCACATCTCACTCATTGTGTAGTATTAATAGATCTTACGCAAGACGATAAGA------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22912061 56 + 22939663 TTC-----------------CTTATTTTGTTGTA-TAGTAAATCTCGAATAAGAT-----GAAAACAGCAAAGACTATG-- i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 331586 55 - 397369 ---------------TTTCTCTC-TTGTA------TAGTAGTTATTGAATAAGATTATGAG----TTACAAAAACAGAGCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1917364 218 - 2029793 I e canFam3.chr24 47658372 389 + 47698779 I e mm10.chr2 181844619 846 + 182113224 I e micMur3.chr18 56927333 256 + 57149010 I a score=1673801.000000 s hg38.chr20_KI270870v1_alt 173582 162 + 183433 --GCGACTGGAGATTGT-GTGAAATTTGGATAAAACTTTTGATATTCACTTTCATACTATTTTGTTT--GGTATTTCTAGAGTTCTAGTTATATAGTATAATTCTTTTTGGAAGTAATTCTTGGACATTTGTAATTCTTTTCTTCCAGCTCCTC-ACACTGTAAACTG s panTro5.chr20 66509007 162 + 66533130 --GCGACTGGAGATTGT-GTGAAATTTGGATAAAACTTTTGATATTCACTTTCATACTATTTTGTTT--GGTATTTCTAGAGTTCTAGTTGTATAGTATAATTCTTTTTGGAAGTAATTCTTGGACATTTGTAATTCTTTTCTTCCAGCTCCTC-ACACTGTAAACTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176219 162 + 62195757 --GCGACTGGAGATTGT-GTGAAATTTGGATAAAACTTTTGATATTCACTTTCATACTATTTTGTTT--GGTATTTCTAGAGTTCTAGTTGTATAGTATAATTCTTTTTGGAAGTAATTCTTGGACATTTGTAATTCTTTTCTTCCAGCTCCTC-ACACTGTAAACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562662 162 - 578057 --GCGACTGGAGATTGC-GTGAAATTTGGATAAAACTTTTGATATTCACTTTCATACTATTTTGTTT--GGTATTTCTAGAGTTCTAGTTATATAGTATAATTCTTTTTGGAAGTAATTCTTGGACATTTGTAATTCTTTTCTTCCAGCTCCTC-GCACTGTAAACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084448 155 - 110113093 --GCGATTGGAGATTGT-GTGAAATTTGGATAAAACTTTTGATATTCACTTTCATACTACTTTGTTT--GGCATTTCTAGAGTTCTAGTTACATAGTGTAATTCTTTTTGGAAGTAATTCTTGGACATTTGTAA-----TTCTTCCAGCACCTC-GCTCTGTAAAC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92823965 162 - 92844088 --GTGATTGGAGATTGT-GTTAAATATGGATAATACTTTTGATACTCACTTTCATACTGTTTTGTTT--GGCATTTCTAGAGTTCTTGTTATATAGTATAATTCTTTTTGGAAGTAATTCTTGGACGTTTGTAATTCTTTCCTTCCAGCTCCTT-GCTCTGTAAACTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489634 162 + 96509753 --GTGATTGGAGATTGT-GTTAAATATGGATAATACTTTTGATACTCACTTTCATACTGTTTTGTTT--GGCATTTCTAGAGTTCTTGTTATATAGTATAATTCTTTTTGGAAGTAATTCTTGGACGTTTGTAATTCTTTCCTTCCAGCTCCTT-GCTCTGTAAACTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959605 162 - 16982598 --GTGATTGGAGATTGT-GTTAAATATGGATAATACTTTTGATACTCACTTTCATACTGTTTTGTTT--GGCATTTCTAGAGTTCTTGTTATATAGTATAATTCTTTTTGGAAGTCATTCTTGGACGTTTGTAATTCTTTCCTTCCAGCTCCTT-GCTCTGTAAACTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761541 162 - 3785965 --GTGATTGGAGATTGT-GTTAACTATGGATAATACTTTTGATACTCACTTTCATACTGTTTTGTTT--GGCATTTCTAGAGTTCTCGTTATATAGTATAATTCTTTTTGGAAGTAATTCTTGGACGTTTGTAATTCTTTTCTTCCAGCTCCTT-GCTCTGTAAACTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351536 145 - 90373283 --GTGATTGGAGATTGT-GTTAAATATGGATAATACTTTTGATACTCACTTTCATACTGTTTTGTTT--GGCATTTCTAGAGTTCTCGTTATATAGTGTAATTCTTTTTGGAA-----------------GTAATTCTTTTCTTCCAGCTCCTT-GCTCTGTAAACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152298 162 - 179258 --GTGATTGGAGATTGT-GTTAAATATGGATAATACTTTTGATACTCACTTTCATACTGTTTTGTTT--GGCATTTCTAGAGTTCTCGTTATATAGTATAATTCTTTTTGGAAGTAATTCTTGGACGTTTGTAATTCTTTTCTTCCAGCTCCTT-GCTCTGTAAACTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621817 162 - 5823884 --GTGATTGGAGATTGT-GTTAAATATGGATAATACTTTTGATACTCACTTTCATACTGTTTTGTTT--GGCATTTCTAGGGTTCTCGTTATATAGTGTAATTCTTTTTGGAAGTAATTCTTGGACATTTGTAATTCTTTTCTTCCAGCTCCTT-GCTCTGGAAACTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58179956 161 + 159171411 --GTGACTGGAGATTGT-GTTAAATCCGGGTAATACTTTTGATATTTACTTTTATACTATTCTGTTT--GGCATTTCTAGAGTTCTAGATATAAAGTGAAATTCTTTTTGGAATTAATTCTTGGACGTTTGTAATTCTTTTCTTCCAGCTCCCTGGCTCTGTAAAC-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343015 163 + 16356641 --GTGATTGGGGATTGT-GTTAAATTTGGGTAATACTTTTGATATTTACTTTCATACTATTTTGTTT--GGCATTTCTAGAGTTCCAGATATAAAGTGAAATTCTTTTTGGAAGTAATTCTTGGACATTTGTAATTCTTTTTTTCCAGCTCCCTGGCTCTGTAAACTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217188 163 + 1231380 --GTGACTAGAGATTGT-GTTAAATTTGGGTAATACTTTTGATATTTACTTTCATACTATTTTGTTT--GGCATTTCTAGAGTTCTAGATATAAAGTGAAATTCTTTTTGGAAGTAATTCTTGGATGTTTGTAATTCTTTTCTTCCAGCTCCCTGGCTCTGTAAACTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743146 155 + 11732439 ----------AGATTGT-GTTAAATTTGGGTAATACTTTTGATATTTACTTTCGTACTATTTTGTTT--GGCATTTCTAGAGTTCTAGATATAAAGCGAAATTCTTTTTGGAAGTAATTCTTGGACGTTTGTAATTCTTTTCTTCCAGCTCCCTGGCTCTGTAAACTG i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22912117 139 + 22939663 --ATGATTGGAGGTTGC-CTTACATTTGGATCACGTTTATGATATTCACTTCTGTACTATTTTGTTT--GAAATTTCTTGGG-TCTATTTATGTAGTATAGTTCTTTCTGGAAG--------GGTGGCTTGT--------------AGCTCCTG-GCTCTGTAAATTG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181845465 133 + 182113224 --GTGGCTGGTG-TTGC-TTTATATCTGGATCG---TTGGAACATTCACATTTTT-CTATTTTGTTT--GTAACGTATAAGGTTCTATTTCTATAGTATGATTCTATTTGGAAA---------------TGTAG-------CTTCTAACTCCTG-GGGCTGCAAAG-- i mm10.chr2 I 846 C 0 s dasNov3.JH569290 331641 139 - 397369 AAGACAAGGATAATTGTCTTTAAATTTAGATCATGCTTCTGACATTCGCTTGCATAATATTTTATTTTGGAAATTCCTAGGTCTC------TGTAGGAGAATTCTTTTTGGAAG----------------------CTTAGCTTCCAGCTTCTG-ACTTTGTAAATCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1917364 218 - 2029793 I e canFam3.chr24 47658372 389 + 47698779 I e micMur3.chr18 56927333 256 + 57149010 I a score=4625.000000 s hg38.chr20_KI270870v1_alt 173744 1 + 183433 -T s panTro5.chr20 66509169 1 + 66533130 -T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176381 1 + 62195757 -T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562824 1 - 578057 -T i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084603 1 - 110113093 -T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824127 1 - 92844088 -T i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489796 1 + 96509753 -T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959767 1 - 16982598 -T i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761703 1 - 3785965 -T i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351681 1 - 90373283 -T i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152460 1 - 179258 -T i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621979 1 - 5823884 -T i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180117 1 + 159171411 -T i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343178 1 + 16356641 -T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217351 1 + 1231380 -T i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743301 1 + 11732439 -T i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1917582 1 - 2029793 -T i proCoq1.NW_012150197v1 I 218 C 0 s otoGar3.GL873542 22912256 1 + 22939663 -C i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181845598 1 + 182113224 -T i mm10.chr2 C 0 C 0 s dasNov3.JH569290 331780 1 - 397369 G- i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47658372 389 + 47698779 I e micMur3.chr18 56927333 256 + 57149010 I a score=358384.000000 s hg38.chr20_KI270870v1_alt 173745 21 + 183433 GTTACATTGCTGTGGGATTTT s panTro5.chr20 66509170 21 + 66533130 GTTACATTGCTGTGGGATTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176382 21 + 62195757 GTTACATTGCTGTGGGATTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562825 21 - 578057 GTTACATTGCTGTGGGATTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084604 21 - 110113093 GTTACGTTGCTATGGGATTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824128 21 - 92844088 GTTACATTGCTGTGGGATTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489797 21 + 96509753 GTTACATTGCTGTGGGATTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959768 21 - 16982598 GTTACATTGCTGTGGGATTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761704 21 - 3785965 GTTACATTGCTGTGGGATTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351682 21 - 90373283 GTTACATTGCTGTGGGATTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152461 21 - 179258 GTTACATTGCTGTGGGATTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5621980 21 - 5823884 GTTACATTGCTATGGGATTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180118 21 + 159171411 GTTACATTGCTGTGGGATTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343179 21 + 16356641 GTTACATTGCTTTGGGATTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217352 21 + 1231380 GTTACATTGCTTTGGGATTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743302 21 + 11732439 GTTACGTTGCTGTGGGATTTT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1917583 21 - 2029793 GTTACATTGCTGTGGGATTTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22912257 21 + 22939663 ATTACATTGCTATGGGATTTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181845599 21 + 182113224 GTTACATTGTTCTGTGATTTT i mm10.chr2 C 0 I 774 s canFam3.chr24 47658761 21 + 47698779 GTTATATCACTATTGGATTGT i canFam3.chr24 I 389 I 13 s dasNov3.JH569290 331781 21 - 397369 ATCACATTGTTATGGGATTTT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56927333 256 + 57149010 I a score=15123.000000 s hg38.chr20_KI270870v1_alt 173766 2 + 183433 -------------AA s panTro5.chr20 66509191 2 + 66533130 -------------AA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176403 2 + 62195757 -------------AA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562846 2 - 578057 -------------GA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084625 2 - 110113093 -------------AA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824149 2 - 92844088 -------------AA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489818 2 + 96509753 -------------AA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959789 2 - 16982598 -------------AA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761725 2 - 3785965 -------------AA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351703 2 - 90373283 -------------AA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152482 2 - 179258 -------------AA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622001 2 - 5823884 -------------AA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180139 2 + 159171411 -------------AA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343200 2 + 16356641 -------------AA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217373 2 + 1231380 -------------AA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743323 2 + 11732439 -------------AA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1917604 2 - 2029793 -------------AC i proCoq1.NW_012150197v1 C 0 I 13 s otoGar3.GL873542 22912278 2 + 22939663 -------------GT i otoGar3.GL873542 C 0 I 13 s canFam3.chr24 47658795 2 + 47698779 -------------AA i canFam3.chr24 I 13 C 0 s dasNov3.JH569290 331802 15 - 397369 ACAATGAAAATATAA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181845620 774 + 182113224 I e micMur3.chr18 56927333 256 + 57149010 I a score=72590.000000 s hg38.chr20_KI270870v1_alt 173768 4 + 183433 CCTG s panTro5.chr20 66509193 4 + 66533130 CCTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176405 4 + 62195757 CCTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562848 4 - 578057 CCTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084627 4 - 110113093 CCTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824151 4 - 92844088 CCTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489820 4 + 96509753 CCTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959791 4 - 16982598 CCTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761727 4 - 3785965 CCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351705 4 - 90373283 CCTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152484 4 - 179258 CCTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622003 4 - 5823884 CCTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180141 4 + 159171411 CCTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343202 4 + 16356641 CCTG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217375 4 + 1231380 TCTG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743325 4 + 11732439 CCTG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56927589 4 + 57149010 CCTG i micMur3.chr18 I 256 C 0 s proCoq1.NW_012150197v1 1917619 4 - 2029793 CCTA i proCoq1.NW_012150197v1 I 13 C 0 s otoGar3.GL873542 22912293 4 + 22939663 CCTG i otoGar3.GL873542 I 13 C 0 s canFam3.chr24 47658797 4 + 47698779 CCTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 331817 4 - 397369 CCAG i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181845620 774 + 182113224 I a score=6573697.000000 s hg38.chr20_KI270870v1_alt 173772 384 + 183433 TGGTTAGCATAGATTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACTTTTAGTTGCAGGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGCGTGCAGAAAGAGCATGAAGAGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttctgcacactgtgtgccaaggtctgttctgggcagtgtacggata------ctt-ac--tcttttaacaat--ttcctgcattt-cacaaatgaggaaacagaggcagggacaggtgaggga s panTro5.chr20 66509197 384 + 66533130 TGGTTAGCATAGATTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACTTTTAGTTGCAGGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGCGTGCAGAAAGAGCATGAAGAGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttctgcacactgtgtgccaaggtctgttctgggcagtgtacggata------ctt-ac--tcttttaacaat--ttcctgcattt-cacaaatgaggaaacagaggcagggacaggtgaggga i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176409 384 + 62195757 TGGTTAGCATAGATTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACTTTTAGTTGCAGGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGCGTGCAGAAAGAGCATGAAGAGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttctgcacactgtgtgccaaggtctgttctgggcagtgtacggata------ctt-ac--tcttttaacaat--ttcctgcattt-cacaaatgaggaaacagaggcagggacaggtgaggga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 562852 381 - 578057 TGGTTAGCATAGATTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACTTTCAGTTGCAGGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTG-ACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAAGAGCATGAAGAGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCATAACTGACA-TTTCTGCACAC--TGTGCCAAGGTGTGTTCTGGGCAGTGTACGGATA------CTT-AC--TCTTTTAAcaat--ttcctgcattt-cacaaatgaggaaacagaggcagggacaggtgaggga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110084631 384 - 110113093 TGGTTAGCATAGATTTA-CTGCATAGACTT-------GTTGCAATGTGAT-ACTTTTAGTTGCAGGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAAGAACATGAAGAGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCATTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgcgtgccaaggtctgttctgggcagtttatgaata------ctt-ac--tcttttaacaat--ttcctgcattt-cacaaatgaggaaacagaggcagggacaggtgaggga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824155 384 - 92844088 TGGTTAGCATAGGTTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACCTTTAGTTGCAAGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTGTACTGTGGGGCTGGTGTGCAGAAGGAACATGAAGAATACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttgccaaggtctgttctgggcagtttatgtata------ctt-ac--tcttttaacaat--ttcctgcattt-cataaatgaggaaacagaggcagggacaggtgaggga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96489824 384 + 96509753 TGGTTAGCATAGGTTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACCTTTAGTTGCAAGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTGTACTGTGGGGCTGGTGTGCAGAAGGAACATGAAGAATACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttgccaaggtctgttctgggcagtttatgtata------ctt-ac--tcttttaacaat--ttcctgcattt-cataaatgaggaaacagaggcagggacaggtgaggga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16959795 384 - 16982598 TGGTTAGCATAGGTTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACCTTTAGTTGCAAGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTGTACTGTGGGGCTGGTGTGCAGAAGGAACATGAAGAATACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttgccaaggtctgttctgggcagtttatgtata------ctt-ac--tcttttaacaat--ttcctgcattt-cataaatgaggaaacagaggcagggacaggtgaggga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3761731 382 - 3785965 TGGTTAGCATAGGTTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACCTTTAGTTGCAAGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAAGAACATGAAGAATACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttgccaaggtctcttctgggcagtttatgtata------ctt-ac--tcttttaacaat--ttcctgcattt-cataaatgaggaaac--aggcagggacaggtgaggga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90351709 384 - 90373283 TGGTTAGCATAGGTTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACCTTTAGTTGCAAGAAGCATTTTT-G--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAAGAACATGAAGAATACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttgccaaggtctgttctgggcagtttatgtata------ctt-ac--tctgttaacaat--ttcctgcattt-cgtaaatgaggaaacagaggcagggacaggtgaggga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152488 384 - 179258 TGGTTAGCATAGGTTTA-CTGTATACACTT-------GTTGCAATGTGAT-ACCTTTAGTTGCAAGAAGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAAGAACATGAAGAATACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttgccaaggtctgttctgggcagtttatgtata------ctt-ac--tcttttaacaat--ttcctgcattt-cataaatgaggaaacagaggcagggacaggtgaggga i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622007 384 - 5823884 TGGTTAGCATAAGTTTA-CTGTATAGACTT-------GTTGCAATGTGAT-ACCTTTAGTTGCAAGATGCATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAACCTTCCTTTGTTACTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAAGAACATGAAGAATACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttaccaaggactgttctgggtagtttatgtata------ctt-ac--tcttttaacaat--ttcctgcattt-cataaatgaggaaacagaggcagggacaggtgaggga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180145 385 + 159171411 TGGTTAGCATAGATTTA-CTGTGTATACTT-------GTTGCAATGTGAT-ACCTTTAGTTGCAGGAAACATTTTG-T--ACTTCCAGGTTTGACTTCTGTGAACCCTCCTTTGTTATTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAAGAGCACGAAGAGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCGCTGGAAGAGAAGGTCAGATTCCCTTCATAACTGACA-TTTTTGCACACTTTTTGCCAATGTCTGTTCTGGGCAGTTTATGTATA------CTTAAC--CCTTTTAAGAAa--ttcctgcattt-cacaaattaggaaccagaggcagggacaggtgaggga i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343206 384 + 16356641 TGGTTAGCATAGATATA-CTGTGTATACTT-------GTTGCAATGTGTT-ACCTTTAGTTGCAGGAAACATTTTG-T--ACTTCCAGGTTTGACTTCTGTGAACCCTCCTTTGTTATTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAAGAGCATGAAGAGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCGCTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttgccaaggtctgttctgggcagtttatgtata------ctt-ac--ccttctaagaaa--ttcctgcattt-cacaaattaggaaccagaggcagggacaggtgagggg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217379 384 + 1231380 TGGTTAGCATAGATTTA-CTGTGTATACTT-------GTTACAATGTGAT-ACCTTTAGTTGCAGGAAACATTTTG-T--ACTTCCAGGTTTGACTTCTGTGAACCCTCCTTTGTTATTGGGAATTGCCTGGAGATTTCTCCGGATTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAAGAGCATGAAGAGTACATGAAAAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttgccaaggtctgttctgggcagtttatgtata------ctt-ac--ccttttaagaaa--ttcctgcattt-cacaaattagtaaccagaggcagggacaggtgaggga i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743329 384 + 11732439 TGGTTAGCACAGATTTA-CTGTGTATACTT-------GTGGCAATGTGAT-ACCTTTAGTTGCAGGAAACATTTTG-T--ACTTCCAGGTTTGACTTCTGTGAACCCTCCTTTGTTATTGGGAATTGCCTGGAGATTTCTCCGGACTGTTCTCAGTATGATCGTGTATACTGTGGGGCTGGTGTGCAGAAGGAGCATGAAGCGTACATGAAGAATCTTCTCAAAGTGGGAGGGATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgaca-tttttgcacactgtttgccatggtctgttctgggcagtttatgtata------ctt-ac--ccttttaagaaa--ttcctgcattt-cgcaaattaggaaccagaggcagggacaggtaaggga i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56927593 387 + 57149010 TGGTTAGCAAAGATTTA-CTGTGTAGACTT-------GTTGCAATATGATAACCTTTAGTTACAGAAAACATTTTT-T--ACTCACAGGTTTGACTTTTGTGAGCCTTCCTTTGTTACTGGCAATTGCCTGGAGATTTCTCCTGATTGTGCTCAGTATGATCGAGTGTACTGTGGGGCTGGTGTACAGAAAGAGCATGAAGAGTACATGAAGAATCTGCTCAAAGTGGGAGGGGTTCTTGTCATGCCACTGGAAGAGAAGGTAAGAGTCCCTTTATAACTGACA-TTTTTGCACACTGAATACCAAGGTCTGTGACAGGCAGTTTACGTATG------GTG-GTgaccctttagcaac--ctcctccattt-cacaaactaggaaacagaggcagggacaggtgaggga i micMur3.chr18 C 0 I 267 s proCoq1.NW_012150197v1 1917623 384 - 2029793 TGGTTAGCAGAGATTTA-CTGTGTAGACTT-------GTTGCAATGTGAT-ACCTTTAGTTACAGAAAACATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAGCCTTCCTTTGTTACTGGCAATTGCCTGGAGATTTCTCCTGATTGTGCTCAGTACGATCGAGTGTACTGTGGGGCTGGCGTGCAGAAAGAGCATGAAGAGTACATGAAGAATCTGCTCAAAGTGGGAGGGGTCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCGCTTCatagctgaca-tttttgcacactgtttaccgaggtctattccaggcagtttacatata------gtg-ac--ccttttaacagc--ttcctccattt-tgcaagttaggaaacagacgcagggatgagtgaggga i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22912297 382 + 22939663 TGGACTGCAAAGATTTA-CTGTGTGTGATTGCATACAGTTGCAGTGTGAT-TCC-----TTACAGAAAACATTTTT-T--ACTTCCAGGTTTGACTTCTGTGAGCCTTCCTTTGTTACTGGCAATTGCCTGGAGATTTCTCCAGATTGTTCTCAGTATGATCGAGTGTACTGTGGGGCTGGTGTGCAGAAAGAGCATGAAGAATATATGAAGAGTCTGCTCAAAGTGGGAGGCATCCTTGTCATGCCACTGGAAGAGAAGGTCAGATTCCCTTCataactgacattttttgtgcactatttaccaaggtctattccaggcagtttacatgta------ttg-ac--cctgttaacaac--tccctctactt-cacaaatcgggaaatag--gctgggacgggagct--- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181846394 348 + 182113224 TGGCAGGCATAACTTTGTTTTTATGTACTT-------ATTACAACAACAT-A--TGTAGTTACAGAAAACTTTTTT-----CTTTCAGATTTGACTTCTGTGAACCTTCCTTTGTAACTGGAAATTGCCTGGAGATTGCTCCAGATTGTTGTCAGTATGATCGTGTTTATTGTGGGGCTGGTGTGCAGAAAGAACATGAAGAGTACATGAAAAATCTTCTCAAAGTTGGAGGCATCCTTGTCATGCCCTTGGAAGAGAAGGTCAGGTTCTCTACAGAGCTGACA--TTGTGTATACTCTCCTTCACAGT----------CAGTTCATGTATA------CA--AC--TCTTGTGGTAGC--TTCTGCCAAGT-TATTAACAGAGTAACA--------------------- i mm10.chr2 I 774 C 0 s canFam3.chr24 47658801 378 + 47698779 TGGTTAGTATAGATTTA-CTGTATAGACTT-------GCTACAG-GTGAT-CTATTCAGTTATGGAAAATATTTTTTT--GCTTTTAGATTTGACTTCTGTGAACCTTCCTTTGTTACTGGCAATTGCCTAGAGATTTCTCCAGATTGTTCTCAGTACGATCGTGTGTACTGTGGGGCTGGTGTGCAGAAAGAGCATGAAGAGTACATGAAGAGTCTTCTCAAAGTAGGAGGCATCCTTGTCATGCCACTGGAAGAGAAGGTCAGACCCCTGTCATAactgacg-cgctta---actgttggccaaggtctgtgccaagaagttgacatacatttttcctt-gc--tttcctcatgaccatccCTCCCCCT-CACAGATGAGGA--CATGGGCAGGGACA--------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 331821 385 - 397369 TGATTAGAATAGAAGTA-CTGAATAGACTC---------TTAAAGATGAT-ATATGTAGTTACAGAAAACATTTTT-TTAAATTTCAGGTTTGAATTCTGTGAACCTTCCTTTGTCACTGGCAATTGCTTGGAGATTTCTCCAGACTGCACACAGTATGACCGTGTGTACTGTGGAGCTGGGGTTCAGAAAGAGCATGAAGAGTACATGAAGAATCTCCTCAAAGTTGGGGGGATCCTTGTCATGCCACTAGAAGAGAAGGTCAGATTCCCTTCATAAATGGTA-GTTTTGAACACTTTTTGCCAGGGTCTCTTCTGAGCACTTTGCATATA------ATT-TC--CCTTGTAACTCC--TTTTACAACCCACACAAATGAGGAAACGGAGGTAGGGTCTGAGGAAGGG i dasNov3.JH569290 C 0 C 0 a score=13073.000000 s hg38.chr20_KI270870v1_alt 174156 1 + 183433 g s panTro5.chr20 66509581 1 + 66533130 g i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176793 1 + 62195757 g i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563233 1 - 578057 g i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085015 1 - 110113093 g i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824539 1 - 92844088 g i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490208 1 + 96509753 g i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960179 1 - 16982598 g i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762113 1 - 3785965 g i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352093 1 - 90373283 g i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152872 1 - 179258 g i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622391 1 - 5823884 g i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180530 1 + 159171411 g i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343590 1 + 16356641 g i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217763 1 + 1231380 g i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743713 1 + 11732439 g i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1918007 1 - 2029793 g i proCoq1.NW_012150197v1 C 0 I 266 s dasNov3.JH569290 332206 1 - 397369 A i dasNov3.JH569290 C 0 C 0 e canFam3.chr24 47659179 0 + 47698779 C e mm10.chr2 181846742 0 + 182113224 C e micMur3.chr18 56927980 267 + 57149010 I e otoGar3.GL873542 22912679 0 + 22939663 C a score=-12199.000000 s hg38.chr20_KI270870v1_alt 174157 2 + 183433 a-t s panTro5.chr20 66509582 2 + 66533130 a-t i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176794 2 + 62195757 a-t i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563234 2 - 578057 a-t i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085016 2 - 110113093 a-t i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824540 2 - 92844088 a-t i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490209 2 + 96509753 a-t i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960180 2 - 16982598 a-t i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762114 2 - 3785965 a-t i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352094 2 - 90373283 a-t i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152873 2 - 179258 a-t i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622392 2 - 5823884 a-t i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180531 3 + 159171411 ctt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343591 3 + 16356641 ctt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217764 3 + 1231380 ctt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743714 3 + 11732439 ctt i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22912679 1 + 22939663 --t i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 332207 2 - 397369 -AT i dasNov3.JH569290 C 0 I 5673 e proCoq1.NW_012150197v1 1918008 266 - 2029793 I e canFam3.chr24 47659179 0 + 47698779 C e mm10.chr2 181846742 0 + 182113224 C e micMur3.chr18 56927980 267 + 57149010 I a score=1702706.000000 s hg38.chr20_KI270870v1_alt 174159 181 + 183433 gcagggtcacgcacatgccctagctggggccagaaGCTGACTCAGGTGGGTGCTTCAGAGCCTGCACGTGAAACGC-TTTtctccaccttcctt----ctctgtctctctctttttcct----------tcttctgtcccttccccctcacctccctcttccttccccttctcc---------ttccccccAGCTGTTCTGAGTT s panTro5.chr20 66509584 181 + 66533130 gccgggtcacgcacatgccctagctggggccagaagctgactcaggtgggtgcttcagagcctgcacgtgaaaccc-ttttctccaccttcctt----ctctgtctctctCTTTTTcct----------tcttctgtcccttccccctcacctccctcttccttccccttctcc---------ttccccccAGCTGTTCTGAGTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62176796 181 + 62195757 gccgggtcacgcacatgccctagctggggccagaagctgactcaggtgggtgcttcagagcctgcacgtgaaaccc-ttttctccaccttcctt----ctctgtctctctCTTtttcct----------tctcctgtcccttccccctcacctccctcttccttccccttctcc---------ttcccCCCAGCTGTTCTGAGTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563236 181 - 578057 gctgggtcacgcacatgccttagctggggccagaagctgactcaggtgggtgcttcagagcctgcacatgaaaccc-ttttctctaccttcctt----ctctgtctctctctttttcct----------tcttctatcccttccccctcacctccctcttccttccccttctcc---------ttccccCCAGCTGTTCTGAGTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085018 171 - 110113093 gccgggtcatgcacatgccctaggcggggccagaacctgactcaggtgggtacttcagagcctgcacGTGAAACCC-TTTTCTccaccttcct--------------tctctctttcct----------tcttctgtcccttcctcctcacctccctcttccttcccCTTCTCC---------TTGCCCCCAGCTGTTCTGAGTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824542 182 - 92844088 gccaggtcatgcacatagcctaggtggggccagaacctgactcaggtgggtacttcagagccTACACATGAAAccctttttctcccccttcctt----ctctctctctttccttttcct----------tgttctgtcccttcctcctcacctccctcttccttccccttctcc---------ttccCCCCAGCTGTTCTGAGTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490211 182 + 96509753 gccaggtcatgcacatagcctaggtggggccagaacctgactcaggtgggtacttcagagccTACACATGAAACCCTTTttctcccccttcctt----ctctctctctttccttttcct----------tgttctgtcccttcctcctcacctccctcttccttccccttctcc---------ttccCCCCAGCTGTTCTGAGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960182 182 - 16982598 gccaggtcatgcacatagcctaggtggggccggaacctgactcaggtgggtacttcagagccTACACATGAAAccctttttctcccccttcctt----ctctctctctttccttttcct----------tgttctttcccttcctcctcacctccctcttccttccccttctcc---------ttccccCCAGCTGTTCTGAGTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762116 182 - 3785965 gccaggtcatgcacatagcctaggtggggccagaacctgactcaggtgggtacttcagagccTACACATGAAAccctttttctcccccttcctt----ctctctctctttccttttcct----------tgttctgtcccttcctcctcacctccctcttccttccccttctcc---------ttccCCCCAGCTGTTTTGAGTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352096 182 - 90373283 gccaggtcatgcacataccctaggtggggccagaacctgactcaggtgggtacttcagagcctgcacATGAAACCCTTTttctccaccttcctt----ctctctctctttccttttcct----------tgttgtatcccttcctcctcacctccctcttccttcgccttctcc---------ttccccCCAGCTGTTCTGAGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 152875 182 - 179258 gccaggtcatgcacatagcctaggtggggccagaacctgactcaggtggggacttcagagccTACACATGAAAccctttttctcccccttcctt----ctctctctctttccttttcct----------tgttctgtcccttcctcctcacctccctcttccttccccttctcc---------tttcccCCAGCTGTTCTGAGTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622394 178 - 5823884 gccaggtcatgcacataccctaggtggggccagaacctgactcaggtgggtacttcagagcctatacATGAAACCCTTTTTCACCACCTTcct--------tctctctttccttttcct----------tcttctatcccttcctcctcacctccctcttccttccccttctcc---------ttccccCCTGCTGttctgagtt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180534 176 + 159171411 gtgaggtcatacacatattctagatggggccagaacctgattcaggtatgtacttcagagactacacgtgaaactc-ttttcTCCATCTtcctt----ctctgtttct-----tttcct----------ccttctatcccttccccgtcacctccctcttccttccccttctccttcccctc-ttccCCCCACT--------GTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343594 182 + 16356641 gtgaggtcatacacatatcctaggtggggccagaacctgagtcaggtaggtacttcagagACTACACATGAAACTC-TTttctccatcttcctt----ctctctctct-----tttcct----------tcttctatcccttccccctcacctccctctg--tttcccttctccttcccctc-ttcTCCCCAGCTGCTCTGAGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1217767 183 + 1231380 gggaggtcatacaggtatcctaggtggggccagaacctgagtcaggtacgtacttcagagactacacgtgaaactc-ttttcTCCGTCTTCCTT----CTC--TTTCT-----TTTCCT----------TCTTCTATCTCTTCCCCCTCACCTCCCTCTTCTTTCCCCTTCTCCTTCCCCTCTTTCCCCCCAGCTGCTCTGAGTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743717 184 + 11732439 gtgaggtcatgcacacatcctaggtggggccagagccggagtcaggtagatacttcagagactacacgtgaagctc--tttctccaTCTTCCTT----CTCTCTTTCT-----TTTCCT----------TCTTCTATCCCTTCCCCCTCACCTCCCTCTGCCTTCCCCCTCTCCTTCCCCTCTTTCCCCCCAGCTGTTCTGAATT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22912680 199 + 22939663 gccaggtcatagagttacccttggtggaggcagaacctaactcagataggcctctcagagcctatgc-tGAAGccc----tctcctcctccctttgagctctcccttcatcttttccctctcctcactctctttttcccctgcctttgcctctcctctttctttcccctcctcttctccttttttctccccAGCTATTCT-AATT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181846742 154 + 182113224 -CAAAGCTATATAGAGGTCTT--------CCATAAACTGCACTATGTTGAATCTTC--------------TACCTC-CTGTCtctcttgttttt----ctttctattttcttctttcct----------cctctctactttttcttctttccctcctcttctt---ccttctc----------ttcACTCTAGCTCCTTTTATTT i mm10.chr2 C 0 I 3780 s canFam3.chr24 47659179 131 + 47698779 ----GGTCACACAGATAGCCTCACTTGGGCCAG---------------GGCACCCTGGAGCCCGTGTTGTAAAACC-TACccctcacccccctt----ctg------------gctcct----------tat-----------ctctccccctctctctcccacctccctccct---------tcccccACAGCTGT-------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1918008 266 - 2029793 I e micMur3.chr18 56927980 267 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I a score=625054.000000 s hg38.chr20_KI270870v1_alt 174340 56 + 183433 TTAATTC-TAATTGTTAATCTATTATAATTGTTCTGCTGTTAGA---ATTATATATAAAA s panTro5.chr20 66509765 56 + 66533130 TTAATTC-TAATTGTTAATCTATTATAATTGTTCTGCTGTTAGA---ATTATATATAAAA i panTro5.chr20 C 0 I 4 s panPan2.chr20 62176977 53 + 62195757 TTAATTC-TAATTGTTAATC---TATAATTGTTCTGCTGTTAGA---ATTATATATAAAA i panPan2.chr20 C 0 I 4 s gorGor5.CYUI01015848v1 563417 56 - 578057 TTAATTC-TAATTGTTAATCTATTATAATTGTTCTGCTGTTAGA---ATTATATATAAAA i gorGor5.CYUI01015848v1 C 0 I 4 s nomLeu3.chr13 110085189 56 - 110113093 TTAATTC-TAATTGTTAATCTATTATAATTGTTCTGTTGTTAGA---ATTATATATAAAA i nomLeu3.chr13 C 0 I 4 s rheMac8.chr10 92824724 56 - 92844088 TTAATTC-TAATTGTTAATCTGTTATAATTGTTCTGTTATTAGA---ATTATATATAACA i rheMac8.chr10 C 0 I 4 s macFas5.chr10 96490393 56 + 96509753 TTAATTC-TAATTGTTAATCTGTTATAATTGTTCTGTTATTAGA---ATTATATATAACA i macFas5.chr10 C 0 I 4 s macNem1.NW_012014244v1 16960364 56 - 16982598 TTAATTC-TAATTGTTAATCTGTTATAATTGTTCTGTTATTAGA---ATTATATATAACA i macNem1.NW_012014244v1 C 0 I 4 s cerAty1.NW_012001373v1 3762298 56 - 3785965 TTAATTC-TAATTGTTAATCTGTTATAATTGGTCTGTTATTAGA---ATTATATATAACA i cerAty1.NW_012001373v1 C 0 I 4 s chlSab2.chr2 90352278 57 - 90373283 TTAATTCTTAATTGTTAATCTATTATAATTGTTCTGTTATTAGA---ATTATATATAACA i chlSab2.chr2 C 0 I 4 s manLeu1.NW_012101652v1 153057 56 - 179258 TTAATTC-TAATTGTTAATGTGTTATAATTGGTCTGTTATTAGA---ATTATATATAACA i manLeu1.NW_012101652v1 C 0 I 4 s colAng1.NW_012114444v1 5622572 56 - 5823884 ttaattc-taattgttaatctattataattATTCTGTTATCAGA---ATTATATATAACA i colAng1.NW_012114444v1 C 0 I 4 s calJac3.chr5 58180710 56 + 159171411 CTAATTC-TAATTGTTAATCTATTATAATTGTTCTGttattata---attatatataaaa i calJac3.chr5 C 0 I 4 s saiBol1.JH378156 16343776 56 + 16356641 TTAATTC-CAATTGTTAATCTATTATAATTGTTCTGTTATTAGA---ATTATATATAAAA i saiBol1.JH378156 C 0 I 4 s cebCap1.NW_016107870v1 1217950 56 + 1231380 TTAATTC-TAACTGTTAATCTGTTATAATTGTTCTGTTACTAGA---ATTATATATAAAA i cebCap1.NW_016107870v1 C 0 I 4 s aotNan1.NW_018500483v1 2743901 56 + 11732439 TTAATTC-TAATTGTTGATCTGTTATAATTGTTCTGTTATTAGA---ATTATATATAAAA i aotNan1.NW_018500483v1 C 0 I 4 s otoGar3.GL873542 22912879 59 + 22939663 TTAATTC-TAATTGTTACTCTGTTATAGTTGTTCTATTATTGGGattattatatataaaa i otoGar3.GL873542 C 0 I 4 s canFam3.chr24 47659310 39 + 47698779 ------------------TCTAGTATGGTTCTTCTATTGTTAGA---ATTACATATAAAA i canFam3.chr24 C 0 I 5 e proCoq1.NW_012150197v1 1918008 266 - 2029793 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56927980 267 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I a score=224892.000000 s hg38.chr20_KI270870v1_alt 174396 22 + 183433 TAGAGTCAT-TCTATTCTCATCA s panTro5.chr20 66509825 22 + 66533130 TAGAGTCAT-TCTATTCTCATCA i panTro5.chr20 I 4 C 0 s panPan2.chr20 62177034 22 + 62195757 TAGAGTCAT-TCTATTCTCATCA i panPan2.chr20 I 4 C 0 s gorGor5.CYUI01015848v1 563477 22 - 578057 TAGAGTAAT-TCTATTCTCATCA i gorGor5.CYUI01015848v1 I 4 C 0 s nomLeu3.chr13 110085249 22 - 110113093 CAGAGTAAT-TGTATTCTCGTCA i nomLeu3.chr13 I 4 C 0 s rheMac8.chr10 92824784 22 - 92844088 TAGAGTAAT-TCTATTCTCATCA i rheMac8.chr10 I 4 C 0 s macFas5.chr10 96490453 22 + 96509753 TAGAGTAAT-TCTATTCTCATCA i macFas5.chr10 I 4 C 0 s macNem1.NW_012014244v1 16960424 22 - 16982598 TAGAGTAAT-TCTATTCTCATCA i macNem1.NW_012014244v1 I 4 C 0 s cerAty1.NW_012001373v1 3762358 22 - 3785965 TAGAGTAAT-TCTATTCTCATCA i cerAty1.NW_012001373v1 I 4 C 0 s chlSab2.chr2 90352339 22 - 90373283 TAGAGTAAT-TCTATTCTCATCA i chlSab2.chr2 I 4 C 0 s manLeu1.NW_012101652v1 153117 22 - 179258 TAGAGTAAT-TCTATTCTCATCA i manLeu1.NW_012101652v1 I 4 C 0 s colAng1.NW_012114444v1 5622632 22 - 5823884 TAGAGTAAT-TCTATTCTCATCA i colAng1.NW_012114444v1 I 4 C 0 s calJac3.chr5 58180770 22 + 159171411 TAGAATAAA-TGTATTCTCATTG i calJac3.chr5 I 4 C 0 s saiBol1.JH378156 16343836 23 + 16356641 TAGAATAAGTTGTATTCTCATTG i saiBol1.JH378156 I 4 C 0 s cebCap1.NW_016107870v1 1218010 22 + 1231380 TGGAATAAA-TGTATTCTCATTG i cebCap1.NW_016107870v1 I 4 C 0 s aotNan1.NW_018500483v1 2743961 22 + 11732439 TAGAATTAA-TGTATTCTCATTG i aotNan1.NW_018500483v1 I 4 C 0 s proCoq1.NW_012150197v1 1918274 22 - 2029793 tagagtaat-tctattctaattg i proCoq1.NW_012150197v1 I 266 C 0 s otoGar3.GL873542 22912942 22 + 22939663 taGAGTAAT-TCTAGTGTAATTG i otoGar3.GL873542 I 4 C 0 s canFam3.chr24 47659354 14 + 47698779 GAGAGTAAC-TCTAT-------- i canFam3.chr24 I 5 C 0 e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56927980 267 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I a score=885352.000000 s hg38.chr20_KI270870v1_alt 174418 66 + 183433 TTAGTCTAATTGTTACATGCCTTGATGTTATGCATTTGACAGGAATCCTTTGCCTAGTGAGAGTCT s panTro5.chr20 66509847 66 + 66533130 TTAGTCTAATTGTTACATGCCTTGATGTTATGCATTTGACAGGAATCCTTTGCCTAGTGAGAGTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177056 66 + 62195757 TTAGTCTAATTGTTACATGCCTTGATGTTATGCATTTGACAGGAATCCTTTGCCTAGTGAGAGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563499 66 - 578057 TTAGTCTAATTGTTAAATGCCTTGATGTTACGCATTTGACAGGAATCCTTTGCCTAGTGAGAGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085271 66 - 110113093 TTAGTCTAATTGTTAAATGCCTTGATGTTATGCATTTTACAGAAATCCTTTGCTTAGTGAGAGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824806 66 - 92844088 TTAGTCTAATTGTTAAATGCCTTGATGTTATGCACTTTACAGGAATCCTTTACTTAGTGAGAGTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490475 66 + 96509753 TTAGTCTAATTGTTAAATGCCTTGATGTTATGCACTTTACAGGAATCCTTTACTTAGTGAGAGTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960446 66 - 16982598 TTAGTCTAATTGTTAAATTCCTTGATGTTATGCACTTTACAGGAATCCTTTACTTAGTGAGAGTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762380 66 - 3785965 TTAGTCTAATTGTTAAATGCCTTGATGTTATGCACTTTACAGGAATCCTTTACTTAGTGAGAGTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352361 61 - 90373283 TTAGTCTAATTGTTAAATGCCTTGATGTTATGCACTTTACAGGAATC-----CTTAGTGAGAGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153139 66 - 179258 TTAGTCTAATTGTTAAATGCCTTGATGTTATGCACTTCACAGGAATCCTTTACTTAGTGAGAGTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622654 66 - 5823884 TTAGCCTAATTGTTAAATGCCTTGATGTTATGCACTTTACAGGAATCCTTTGCTTAGTGAGAGTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180792 66 + 159171411 TTAGTCTAATCGATAAATGCCTTGATGTTATGCATTGTACAGGAACCCTTTGCTTAGTGAGAGTCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343859 66 + 16356641 TTAGTCTAATTGATAAGTGCCTTGTTGTTATGCATTGTACAGGAACCCTTTGCTTAGTGAGAGTCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218032 66 + 1231380 TTAGTCTAATTGATAAATGCCTTGATGTTATGCATTGTACAGGAACCCTTTGCTTAGTGAGAGTCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2743983 66 + 11732439 TTAGTCTAATTGATAAATGCCTTGATGTTATGCATTGTACAGGAACCCTTTGCTTAGTGAGAGTCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56928247 65 + 57149010 TTAGTCTAATTATTAAATACCTTAATGGTGAGCATTTTACAGGAATCC-CTGCTTAGTGGGAATCT i micMur3.chr18 I 267 C 0 s proCoq1.NW_012150197v1 1918296 65 - 2029793 ctagtctaattATTAAATACCTTGATGGTGAGCATTTTACAGGAATCC-CTGCTTAGTGGGAATCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22912964 65 + 22939663 TTACTCTAATTTCTAAATACCTTGATGGTAAGTATTGTACAGGAATCC-CTGGTTAGTGGGAATCt i otoGar3.GL873542 C 0 I 294 s canFam3.chr24 47659368 62 + 47698779 ----TCTAATTGTTAAATTCTGTGACAGTGAGTGTTACACAGAAGTCCCTTCCTTAGGAGGGATCT i canFam3.chr24 C 0 C 0 e mm10.chr2 181846896 3780 + 182113224 I e dasNov3.JH569290 332209 5673 - 397369 I a score=1552248.000000 s hg38.chr20_KI270870v1_alt 174484 121 + 183433 TGTCCAAG-TTTGCTGTTTGGTCATGCTTGTTTGTCTGTGT------TACTGTATGTCACTGGGAAAAATAGTTTATAGTAAATGAACAGATTAATCAGACATGAATTGGTCACCAAGAAGAATGTCT s panTro5.chr20 66509913 121 + 66533130 TGTCCAAG-TTTGCTGTTTGGTCATGCTTGTTTGTCTGTGT------TACTGTATTTCACTGGGAAAAATAGTTTATAGTAAATGAACAGATTAATCAGACATGAATTGGTCACCAAGAAGAATGTCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177122 121 + 62195757 TGTCCAAG-TTTGCTGTTTGGTCATGCTTGTTTGTCTGTGT------TACTGTATTTCACTGGGAAAAATAGTTTATAGTAAATGAACAGATTAATCAGACATGAATTGGTCACCAAGAAGAATGTCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563565 121 - 578057 TGTCCAAG-TTTGCTGTTTGGTCTTGCTTGTTTGTCTGTGT------TACTGTATTTCACTAGGAAAAATAGTTTATAGTAAATGAACAGATTAATCAGACATGAATTGGTCACCAAGAAAAATGTCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085337 121 - 110113093 TGTCCAAG-TTTGCTGTTTGGTCATGCATGTTTGTCTGTGT------TACTGTATTTCACTGGGAAAAATAGTTTATAGTAAATGAACAGATTAATCAGACAGGAATTGGTCACCAAGAAGAATGTCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824872 121 - 92844088 TGTCCAAG-TTTGCTATTTGGTCATGCATGTTTGTCTGTGT------TACTGTGTTTCACTGTGAAAAATAGTTCATAATAAATGAACAGATTAATCAGACATGAATTGGTCACCAAGAAGAATGTCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490541 121 + 96509753 TGTCCAAG-TTTGCTATTTGGTCATGCATGTTTGTCTGTGT------TACTGTGTTTCACTGTGAAAAATAGTTCATAATAAATGAACAGATTAATCAGACATGAATTGGTCACCAAGAAGAATGTCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960512 121 - 16982598 TGTCCAAG-TTTGCTATTTGGTCATGCATGTTTGTCTGTGT------TACTGTGTTTCACTGTGAAAAATAGTTCATAATAAATGAACAGATTAATCAGACATGAATTGGTCACCAAGAAGAATGTCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762446 121 - 3785965 TGTCCAAG-TTTGCTATTTGGTCATGCGTGTTTGTCTGTGT------TACTGTGTTTCACTGTGAAAAATAGTTCATAATAAATGAACAGATTAATCAGACATGAATTGGTCACCAAGAAGAATGTCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352422 121 - 90373283 TGTCCAAG-TTTGCTATTTGGTCATGCATGTTTGTCTGTGT------TACTGTGTTTCACTGTGAAAAATAGTTTATCATAAATGAACAGATTAATCAGACATGAATTGGTGACCAAGAAGAATGTCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153205 121 - 179258 TGTCCAAG-TTTGCTATTTGGTCATGCATGTTTGTCTGTGT------TACTGTGTTTCACTGTGAAAAATAGTTCATAATAAATGAACAGATTAATCAGACATGAATTGGTCACCAAGAAGAATGTCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622720 121 - 5823884 TGTCCAAA-TTTGCTATTTGGTCGTGCATGTTTGTCTGTGG------TACTGTATTTCACTGTGAAAAACAGTTTATAGTAAATGAACAGATTATTCAGACATGAATTGGTCACCAAGAAGAATGTCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180858 118 + 159171411 TGTCCAAG-TTTGCTGTTTGGCCATGCATGTTTGTCTG--T------TACTATATTTCACTGGGTAATATAGTTCATAGTAAATGAACAGATTAA-CAGACACGAATTGGTCATCAAGAAGAATGCCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16343925 120 + 16356641 TGTCCACG-TTTGCTGTTTGGTCATGCATGCTGGTCTGCAT------TACTGTATTTCACTGGGTAAAACAGTTCATAGTAAATGAACAGATTAA-CAGACACGAATTGGTCACCAAGAAGAATGCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218098 91 + 1231380 TGTCCAGG-TTTGCCGTTTGGTCATGCATGTTTGTCTGTGT------TACTGTATTTCACTGGGT-----------------------------A-CAGACACGAGTTGGTCACCAAGAAGAATGCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744049 120 + 11732439 TGTCCAAG-TTTGCTGTTTGGTCATGCGTGTTTGTCTGTGT------TACTGTATTTCACTGGGTAAAATATTTCATAGTAAACGAACAGATTAA-CAGACACGAACTGGGCACCAAGAAGAATGCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56928312 128 + 57149010 TGTCCAAATTTTGTTATTTGGTCATGCATGTTTGTCTATGTTTTAGATACTATGTTTCACGGGGGAAAATAGATTACAATAAATGAGCAGATTACTCAGACATGAATTGGTCATCAGGAAGAATGTCT i micMur3.chr18 C 0 I 1946 s proCoq1.NW_012150197v1 1918361 128 - 2029793 TGTCCAAATTTTGTTATTTGGTCATGCATGTTTGTCTATGTTTTAGATACTATGTTTAGCTGGGGAAAATAGATTATAATAAATGAGCAGATTACTCAGACATGAATTGGTCATCAGGAAGAATGTCT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22913323 121 + 22939663 TTTCCAAGTTTTGTTACTTGGTCATGCACTTTTG----TGTTTCAGATACTGCATTTA--TGGAGAAAATAGATTATAATAAATGAGCAGACATGTCAGACATGAACTGGTCATCAGG-AGAATGTCT i otoGar3.GL873542 I 294 C 0 s canFam3.chr24 47659430 124 + 47698779 CGTCTCAG-T---CTGTTTGGTCATGCATGTTTCTGTATGTTGTTGCTATTGTGCTTCCTTGAGAAACACACGTTGTAATCAATAAGAAGATGAATCAGACCCGAATTGGTCATCAGGAATAATGTCT i canFam3.chr24 C 0 C 0 e mm10.chr2 181846896 3780 + 182113224 I e dasNov3.JH569290 332209 5673 - 397369 I a score=212546.000000 s hg38.chr20_KI270870v1_alt 174605 15 + 183433 CCCAGTCACAAAGAA s panTro5.chr20 66510034 15 + 66533130 CCCAGTCACAAAGAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177243 15 + 62195757 CCCAGTCACAAAGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563686 15 - 578057 CCCAGTCACAAAGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085458 15 - 110113093 CCCAGTCACAAAGAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92824993 15 - 92844088 CCCAGTCACAAAGAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490662 15 + 96509753 CCCAGTCACAAAGAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960633 15 - 16982598 CCCAGTCACAAAGAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762567 15 - 3785965 CCCAGTCACAAAGAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352543 15 - 90373283 CCCAGTCACAAAGAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153326 15 - 179258 CCCAGTCACAAAGAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622841 15 - 5823884 CCCAGTCACAAAGAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180976 15 + 159171411 CTCAGTCACAAAGAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344045 15 + 16356641 CTCAGTCACAGAGAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218189 15 + 1231380 CTCAGTCATAAAGAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744169 15 + 11732439 CTCAGTCACAAAGAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1918489 13 - 2029793 --CAGTCACAAAGAA i proCoq1.NW_012150197v1 C 0 I 1485 s otoGar3.GL873542 22913444 15 + 22939663 CTGAGTCACAAAGAA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47659554 13 + 47698779 --CCATCACAAAGAA i canFam3.chr24 C 0 C 0 e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I a score=299316.000000 s hg38.chr20_KI270870v1_alt 174620 30 + 183433 CTAGGAAAACAC--AAATAAT-AAAAATTAGGA s panTro5.chr20 66510049 30 + 66533130 CTAGGAAAACAC--AAATAAT-AAAAATTAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177258 30 + 62195757 CTAGGAAAACAC--AAATAAT-AAAAATTAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563701 30 - 578057 CTAGGAAAACAC--AAATAAT-AAAAATTAGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085473 30 - 110113093 CTAGGAAAACAC--AAATAAT-AAAAATTAGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825008 30 - 92844088 CTAGGAAAACAC--TAATAGT-AAAAATTAGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490677 30 + 96509753 CTAGGAAAACAC--TAATAGT-AAAAATTAGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960648 30 - 16982598 CTAGGAAAACAC--TAATAGT-AAAAATTAGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762582 30 - 3785965 CTAGGAAAACAC--TAATAGT-AAAAATTAGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352558 30 - 90373283 CTAGGAAAACAC--TAATAGT-AAAAATTAGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153341 30 - 179258 CTAGGAAAACAC--TAATAGT-AAAAATTAGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622856 30 - 5823884 CTAGGAAAACAC--TAATAGT-AAAAATTAGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58180991 27 + 159171411 CTAGGAAAATAA-----AAAT-AAAAATTAGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344060 30 + 16356641 CTAGGaaaaaaa--aataaat-aaaaattaGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218204 28 + 1231380 CTAGGAAAAAAA----CCAAT-AAAAATTAGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744184 29 + 11732439 CTAGGAAAAAAA---AACAAT-AAAAATTAGGA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22913459 30 + 22939663 CTAGGAAAA-AC--AAATGATAAAAAACTAGGA i otoGar3.GL873542 C 0 I 3809 s canFam3.chr24 47659567 32 + 47698779 CTAGGGAAAAATGGAAGTGAT-AAAAATTAGGA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I a score=124607.000000 s hg38.chr20_KI270870v1_alt 174650 14 + 183433 GGTTTTAATTGTTT s panTro5.chr20 66510079 14 + 66533130 GGTTTTAATCGTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177288 14 + 62195757 GGTTTTAATCGTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563731 14 - 578057 GGTTTTAATTGTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085503 14 - 110113093 GGTTTTAATTGTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825038 14 - 92844088 GGTTTTAATTGTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490707 14 + 96509753 GGTTTTAATTGTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960678 11 - 16982598 GGTTTTAA---TTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762612 14 - 3785965 GGTTTTAATTGTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352588 14 - 90373283 GATTTTAATTGTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153371 14 - 179258 GGTTTTAATTGTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622886 14 - 5823884 GGTTTTAATTGTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181018 14 + 159171411 GTTTGTAAtttttt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344090 14 + 16356641 GTTTTTAGTTGTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218232 14 + 1231380 GTTTTTAATTGTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744213 14 + 11732439 GTTTTTAATTGTTT i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47659599 14 + 47698779 GACTGTACATTTTT i canFam3.chr24 C 0 I 5531 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I e otoGar3.GL873542 22913489 3809 + 22939663 I a score=933740.000000 s hg38.chr20_KI270870v1_alt 174664 121 + 183433 TAAT-AAAAAtttggagatgagatcttgctc-tgtcatccaggctggagtacagtggcatgataatagctcactgtaacttcaaactcatgggctcaagtgacccttccgcctcagcatccca- s panTro5.chr20 66510093 121 + 66533130 TAAT-AAAAAtttggagatgagatcttgctc-tgtcatccaggctggagtacagtggcatgataatagttcactgtaacttcaaactcctgggctcaagtgacccttccgcctcagcatccca- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177302 121 + 62195757 TAAT-AAAAAtttggagatgagatcttgctc-tgtcatccaggctggagtacagtggcatgataatagttcactgtaacttcaaactcctgggctcaagtgacccttccgcctcagcatccca- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563745 121 - 578057 TAAT-AAAAAtttggagatgagatcttgctc-tgtcatccaggctggagtacagtggcatgataatagctcactgtaatttcaaactcctgggctcaagtgacccttctgcctcagcatccca- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085517 121 - 110113093 TAAT-AAAAAtttggagatgagatcttgctc-tgtcatccaggctggagtacagtggcatgataatagctcaccgtaacttcaaactcctgggctcaagtgacccttccgtctcagcatccca- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825052 107 - 92844088 CAAT-AAAAAtttggagatgagatcttgctc-tgtcattcaggctggagt------------taatagctgactataacttcaaactcctgggctgaagtga-ccttctgcctcagcatcca-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490721 107 + 96509753 CAAT-AAAAAtttggagatgagatcttgctc-tgtcattcaggctggagt------------taatagctgactataacttcaaactcctgggctgaagtga-ccttctgcctcagcatcca-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960689 107 - 16982598 CAAT-AAAAAtttggagatgagatcttgctc-tgtcattcaggctggagt------------taatagctgactataacttcaaactcctgggctgaagtga-ccttctgcctcagcatcca-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762626 119 - 3785965 CAAT-AAAAAtttggaaatgagatcttgctc-tgtcattcaggctggagtacagtggcgtgataatagctgactataacttcaaactcctgggctgaagtga-ccttctgcctcagcatcca-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352602 119 - 90373283 CAGT-AAAAATGTGgagatgagatcttactc-tgtcattcaggctggagtacagtggcgtgataatagctgactataacttcaaactcctgggctgaagtga-ccttctgcctcagcatcca-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153385 119 - 179258 CAAT-AAAAAtttggagatgagatcttgctc-tgtcattcaggctggagtacagtggcgtgataatagctgactataacttcaaactcctgggctgaagtga-ccttctgcctcagcatcca-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5622900 120 - 5823884 CAATAAAAAAtttggagatgagatcttgctc-tgtcattcaggctggagtacagtggcttgataatagctgactataacttcaaactcctgggctcaagtga-ccttctgcctcagcatcca-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181032 120 + 159171411 t--t-tttttttttgagacggagtttcgctcttgttacccaggctggagtgcaatagcctgatctcggctcaccgcaacctctgcctcctgggttcaggtaattctcctgcctcagcctcct-g i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344104 121 + 16356641 TAAT-AAAAAtttggagatgggatctttctc-tgtcatctaggctggagtacagtggcatgataatagctcactgtaacctcaaactcctgggctcaaatggtccttccgcctcagcgtccc-a i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218246 102 + 1231380 TAAT-AAAAAtttggagatgggatctttctc-tgtcatctaggctggagca-------------------cactgtaacctcaaactcctgggctcaagtgatccttccgcctcagcgtccc-a i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744227 120 + 11732439 TAAT-AAAAAtttggagatgggatctttctc-tgtcatctaggctggagtacagtggcatgataatagctcactgtaacctcaaactcctgggcttaa-tcacccttccgcctcagcatccc-a i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e canFam3.chr24 47659613 5531 + 47698779 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I e otoGar3.GL873542 22913489 3809 + 22939663 I a score=395238.000000 s hg38.chr20_KI270870v1_alt 174785 49 + 183433 agtagctggcactataggcacgtgctgccatgcccagataa--atttattt s panTro5.chr20 66510214 49 + 66533130 agtagctggcactataggcacgtgctgccatgcccagataa--atttattt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177423 49 + 62195757 agtagctggcactataggcacgtgctgccatgcccagataa--atttattt i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110085638 46 - 110113093 agtagctggcactataggcacgtgctgccatgcccagctta--at---ttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825159 49 - 92844088 agcagctggcactgtaggcacgtgctgccatgcccagctaa--atttattt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490828 49 + 96509753 agcagctggcactgtaggcacgtgctgccatgcccagctaa--atttattt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960796 49 - 16982598 agtagctggcactgtaggcacgtgctgccatgcccagctaa--atttattt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762745 49 - 3785965 agtagctggcactgtaggcacgtgctgccatgcccagctaa--atttattt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352721 49 - 90373283 agtagctggcactgtaggcacgtgctgcgatgcccagctac--atttattt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153504 49 - 179258 agtagctggcactgtaggcacgtgctgccatgcccagctaa--atttattt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623020 49 - 5823884 aatagctggcactgtaggcacatgctgccatgcccagctaa--atttattt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181152 51 + 159171411 agtagctgggattacaggcatgcgccaccatgcacagctaattttttgtat i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344225 49 + 16356641 agtagctggcactacaggcacatgctgccatgtctcgctaa--ttttattt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218348 49 + 1231380 agtagctggcactacaggcacatgctgccatgccccgctaa--ttttattt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744347 49 + 11732439 agtagctggcactacaggcacatgctgccatgcccagctaa--ttttattt i aotNan1.NW_018500483v1 C 0 I 2 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e canFam3.chr24 47659613 5531 + 47698779 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I e gorGor5.CYUI01015848v1 563866 0 - 578057 C e otoGar3.GL873542 22913489 3809 + 22939663 I a score=3871.000000 s hg38.chr20_KI270870v1_alt 174834 3 + 183433 ttt s panTro5.chr20 66510263 3 + 66533130 ttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177472 3 + 62195757 ttt i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110085684 3 - 110113093 ttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825208 3 - 92844088 aat i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490877 3 + 96509753 aat i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960845 3 - 16982598 aat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762794 3 - 3785965 aat i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352770 3 - 90373283 aat i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153553 3 - 179258 aat i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623069 3 - 5823884 aat i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181203 3 + 159171411 ttt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344274 3 + 16356641 ttt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218397 3 + 1231380 ttt i cebCap1.NW_016107870v1 C 0 I 66 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e canFam3.chr24 47659613 5531 + 47698779 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I e gorGor5.CYUI01015848v1 563866 0 - 578057 C e aotNan1.NW_018500483v1 2744396 2 + 11732439 I e otoGar3.GL873542 22913489 3809 + 22939663 I a score=566313.000000 s hg38.chr20_KI270870v1_alt 174837 137 + 183433 aaatatttatttatttatt----tatttatttagagacagagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcagcttagtgcaacctctgcctcctgggttcaagcgattcttctgcctcagcctcctg s panTro5.chr20 66510266 129 + 66533130 aaa--------tatttatt----tatttatttagagacggagtctcgctctgtcgcccaggctggagtgcagtggcgcaatctcagcttagtgcaacctccgcctcctgggttcaagcgattctcctgcctcagcctcctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177475 133 + 62195757 aaa----tatttatttatt----tatttatttagagacggagtctcgctctgtcgcccaggctggagtgcagtggcgcgatctcagcttagtgcaacctcggcctcctgggttcaagcgattctcctgcctcagcctcctg i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110085687 133 - 110113093 aaa----tatttatttatt----tatttatttagagacggagtctcactctgtcacccaggctggagtgcagtggtgcgatctcagcttagtgcaacctccacctcctgggttcaagcgattatcctgactcagcctcctg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825211 128 - 92844088 taa---------attaatt----tatttaattacagacagagtctcactgtgttgcccaggctggagtgcagtggcgcaatctcagctcagtgcaacctctgcctcctgggttgaagcgattatcctgcctcagcctcctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96490880 128 + 96509753 taa---------attaatt----tatttaattacagacagagtctcactgtgttgcccaggctggagtgcagtggcgcaatctcagctcagtgcaacctctgcctcctgggttgaagcgattatcctgcctcagcctcctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960848 128 - 16982598 taa---------attaatt----tatttaattacagacagagtctcactgtgttgcccaggctggagtgcagtggcgcaatctcagctcagtgcaacctctgcctcctgggttgaagcgattatcctgcctcagcctcctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762797 128 - 3785965 taa---------atttatt----tatttaattacagacagagtctcactctgttgcccaggctggagtgcagtggcgcaatctcggctcagtgcaacctccgcctcctgggttgaagcgattatcctgcctcagcctcctg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352773 132 - 90373283 taa---------attaattgatttatttaattacagacggagtctcactctgttgcccaggctggagtgcagtggcgcaatctcggctcagtgcaacctccgcctcccgggttgaagcgattatcctgcctcagcctgctg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153556 132 - 179258 taa---------attaattaatgtatttaattacagacagagtctcactctgttgcccaggctggagtgcagtggcgcaatctcggctcagtgcaacctccgcctcctgggttgaagcgattatcctgcctcagcctcctg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623072 132 - 5823884 taa---------attaattaatttatttaattacagacggagtttcactctgttgcccaggctggagtgcagtggcgcgatctcggctcagtgcaacctccgcctcccaggttccagcgattatcctgcctcagcctcctg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181206 80 + 159171411 ----------------------------tagtagagatggggtttcacaatggtgaccaggatgg-------------------------------tctcaatctcttgacctcatg--atccacccacctcggcctccca i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344277 79 + 16356641 ----------------------------tagta---acaggttctcactgtgttgcccaggctga-------------------------------ttgcaaactcctgacttcaagcagtcctctcacctcagcctccag i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e canFam3.chr24 47659613 5531 + 47698779 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I e gorGor5.CYUI01015848v1 563866 0 - 578057 C e cebCap1.NW_016107870v1 1218400 66 + 1231380 I e aotNan1.NW_018500483v1 2744396 2 + 11732439 I e otoGar3.GL873542 22913489 3809 + 22939663 I a score=331070.000000 s hg38.chr20_KI270870v1_alt 174974 51 + 183433 agtagctgggattacaggtgcgtgccaccacacccagctaatttttgtatt s panTro5.chr20 66510395 51 + 66533130 agtagctgggattacaggtgcgtgccaccacacccagctaatttttgaatt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177608 51 + 62195757 agtagctgggattacaggtgcgtgccaccacacccagctaatttttgaatt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563866 51 - 578057 agtagctgggattacaggtgcgtgccaccacacccagctaatttttgtatt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085820 51 - 110113093 agtagctgagattacaggtgcgcgctaccacacccagctaatttttgtatt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825339 51 - 92844088 agtagctgggattacaggtgcgcgccgccacacccagctaatttttgcatt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491008 51 + 96509753 agtagctgggattacaggtgcgcgccgccacacccagctaatttttgcatt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16960976 51 - 16982598 agtagctgggattacaggtgcgcgccgccacacccagctaatttttgcatt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762925 51 - 3785965 agtagctgggattacaggtgcgcgctgccacacccagctaatttttgcatt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352905 51 - 90373283 agtagctgggattacaggtgcacgccaccacacccagctaatttttgcatt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153688 51 - 179258 agtagctgggattacaggtgcgcgctgccacacccagctaatttttgcatt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623204 51 - 5823884 agtagctgggattacaggtgcgcgccgccacacccagctaatttttgtatt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181286 51 + 159171411 aagtgctgggattacaggcttgagccaccgcgcccggccTGTAATTGTTTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344356 42 + 16356641 agttgtt---------ggcatgagccatcacacctggcAGAATATTGTTTT i saiBol1.JH378156 C 0 I 538 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e canFam3.chr24 47659613 5531 + 47698779 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I e cebCap1.NW_016107870v1 1218400 66 + 1231380 I e aotNan1.NW_018500483v1 2744396 2 + 11732439 I e otoGar3.GL873542 22913489 3809 + 22939663 I a score=753477.000000 s hg38.chr20_KI270870v1_alt 175025 133 + 183433 --------tttagtagagacagggtttcaccatgttgttcaggctgg-------------------------------tctcagagctcctgacctc--atgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccgtgcccggcctaattttattt- s panTro5.chr20 66510446 133 + 66533130 --------tttagtagagacagggtttcaccatgttgttcaggctgg-------------------------------tctcagagctcctgacctc--atgatctgcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcctaattttattt- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177659 133 + 62195757 --------tttagtagagacagggtttcaccatgttgttcaggctgg-------------------------------tctcagagctcctgacctc--atgatctgcccacctcggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcctaattttattt- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 563917 133 - 578057 --------tttagtagagacagggtttcaccatgttgttcaggctgg-------------------------------tctcagagctcctgacctc--atgatccgcccacctcggcctcccaaagtgctgggattacaggtgtgagccactgcgcccggccTAAttttattt- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110085871 133 - 110113093 --------tttagtagagacagggtttcaccatgttggtcaggctgg-------------------------------tctcagagctcctgacctc--atgatccgcccaccttggcctcccaaagtgctctgattacaggtgtgagccaccgcgcccggcctaattttattt- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825390 132 - 92844088 --------tttagtagagacagggtttcaccatgttggtcaggctgg-------------------------------tctcggagcgcctgacctc--gtgat-cgcccgtgtcggcctcccaaagtgctgggattacaggtctgagccactgcgcctggcctaattttattt- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491059 132 + 96509753 --------tttagtagagacagggtttcaccatgttggtcaggctgg-------------------------------tctcggagcgcctgacctc--gtgat-cgcccgtgtcggcctcccaaagtgctgggattacaggtctgagccactgcgcctggcctaattttattt- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961027 132 - 16982598 --------tttagtagagacagggtttcaccatgttggtcaggctgg-------------------------------tctcggagcgcctgacctc--gtgat-cgcccatgtcggcctcccaaagtgctgggattacaggtctgagccactgcgcctggcctaattttattt- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3762976 132 - 3785965 --------tttagtagagacagggtttcaccatgttggtcaggctgg-------------------------------tctcggagcgcttgacctc--gtgat-cgcccgtgtcggcctcccaaagtgctgggattacaggtctgagccactgcgcctggcctaattttattt- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90352956 132 - 90373283 --------tttagtagagacagggtttcaccatgttggtcaggctgg-------------------------------tctcggagcgcctgacctc--gtgat-cgcccgtgtcggcctcccaaagtgctaggattacaggtctgagccactgcgcctggcctaattttactt- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153739 132 - 179258 --------tttagtagagacagggtttcaccatgttggtcaggctgg-------------------------------tctcggagcgcctgacctc--gtgat-cgcccgtgtcggcctcccaaagtgctgggattacaggtctgagccactgcgcctggcctaattttattt- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623255 133 - 5823884 --------tttagtagagacggggtttcaccatgttcgtcaggctgg-------------------------------tctccgagcgcctgacctc--gtgatccgcccgtgtcagcctccccaagtgctgggattacaggtatgagccactgcacccagcctaattttattt- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181337 170 + 159171411 AATAAAAAtt---tggagatgggatctttctctgtcatataggctggagtacagtggcatgataatagctcactgtaacctca-aactcctgggctcaagtaacccttctgcctcagcgtcccaagtagctggcactacagacacatgctgccatgcccag-ctaattttatttt i calJac3.chr5 C 0 C 0 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e canFam3.chr24 47659613 5531 + 47698779 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I e saiBol1.JH378156 16344398 538 + 16356641 I e cebCap1.NW_016107870v1 1218400 66 + 1231380 I e aotNan1.NW_018500483v1 2744396 2 + 11732439 I e otoGar3.GL873542 22913489 3809 + 22939663 I a score=653662.000000 s hg38.chr20_KI270870v1_alt 175158 81 + 183433 ttttagtgatgggctctcactgtgttgcctgggctgatcacaaactcctggcctcaagcaattgcctcacctcagcctcca s panTro5.chr20 66510579 81 + 66533130 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctggcctcaagcaattgcctcacctcagcctcca i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177792 81 + 62195757 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctggcctcaagcaattgcctcacctcagcctccA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564050 81 - 578057 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctggcctcaagcaattgcctcacctcagcctcca i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086004 81 - 110113093 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctggcctcaagcagtcgcctcacctcagcctcca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825522 81 - 92844088 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctggcctcaagcagtcgcctcacttcagcctcca i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491191 81 + 96509753 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctggcctcaagcagtcgcctcacttcagcctcca i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961159 81 - 16982598 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctggcctcaagcagtcacctcacttcagcctcca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763108 81 - 3785965 ttttagtgacgggttctcactgtgttgcccaggctgatcacaaactcctggcctcaagcagtcgcctcacttcagcctcca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353088 81 - 90373283 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctgtcctcaagcagtcgcctcacttcagcctcca i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153871 81 - 179258 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctggcctcaagcagtcgcctcacttcagcctcca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623388 81 - 5823884 ttttagtgacgggctctcactgtgttgcccaggctgatcacaaactcctggcctcaagcagtcgcctcacttcagcctcca i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181507 81 + 159171411 ttttagtgacaggttttcactgtgttgcccaggctgatcacaaactcctggctttaagcagtcctctcacctcagcctcca i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2744398 81 + 11732439 ttttagtgacaggttctcgctgtgttgcccaggctgatcacaaactcctggcttcaagcagccctctcactgcagcctcca i aotNan1.NW_018500483v1 I 2 C 0 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e canFam3.chr24 47659613 5531 + 47698779 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I e saiBol1.JH378156 16344398 538 + 16356641 I e cebCap1.NW_016107870v1 1218400 66 + 1231380 I e otoGar3.GL873542 22913489 3809 + 22939663 I a score=275462.000000 s hg38.chr20_KI270870v1_alt 175239 29 + 183433 gagttgttggcatgagccatcacacctgg s panTro5.chr20 66510660 29 + 66533130 gagttgttggcatgagccgtcacagctgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177873 29 + 62195757 GAGTTGTTGGCATGAGCCGTCACAGCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564131 29 - 578057 gagttgttggcatgagccatcacacctgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086085 29 - 110113093 gagttgttggcatgagccatcacacctgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825603 29 - 92844088 gagttgttggcatgagccatcacacctgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491272 29 + 96509753 gagttgttggcatgagccatcacacctgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961240 29 - 16982598 gagttgttggcatgagccatcacacctgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763189 29 - 3785965 gagttgctggcatgatccatcacacctgg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353169 29 - 90373283 gagttgttggcatgagccatcacacctgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153952 29 - 179258 gagttgttggcatgagccatcacacctgg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623469 29 - 5823884 gagttgttggcatgagccatcacacctga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181588 29 + 159171411 gagttgttggcatgagccatcacacctgg i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1218466 29 + 1231380 gagttgttggcatgagccatcacacctgg i cebCap1.NW_016107870v1 I 66 C 0 s aotNan1.NW_018500483v1 2744479 29 + 11732439 gagttgttggcatgagccgtcacacctgg i aotNan1.NW_018500483v1 C 0 C 0 e proCoq1.NW_012150197v1 1918502 1485 - 2029793 I e canFam3.chr24 47659613 5531 + 47698779 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e dasNov3.JH569290 332209 5673 - 397369 I e saiBol1.JH378156 16344398 538 + 16356641 I e otoGar3.GL873542 22913489 3809 + 22939663 I a score=250260.000000 s hg38.chr20_KI270870v1_alt 175268 20 + 183433 cAGAATATTGTTTTAAATGT s panTro5.chr20 66510689 20 + 66533130 cAGAATATTGTTTTCAATGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177902 20 + 62195757 CAGAATATTGTTTTCAATGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564160 20 - 578057 cAGAATATTGTTTTAAATGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086114 20 - 110113093 TGGaatattgttttaaatgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825632 20 - 92844088 cAGAATATTGTTTTAAATGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491301 20 + 96509753 cAGaatattgttttaaatgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961269 20 - 16982598 cAGAATATTGTTTTAAATGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763218 20 - 3785965 cAGAATATTGTTTTAAATGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353198 20 - 90373283 cAGaatattgttttaaatgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 153981 20 - 179258 cAGAATATTGTTTTAAATGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623498 20 - 5823884 cAGAATATTGTTTTAAATGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181617 20 + 159171411 cAGAATATTGTTTTAGATGT i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1218495 20 + 1231380 cAGAAGATTGTTTTAGATGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744508 20 + 11732439 cAGAATATTGTTTTAGATGT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1919987 20 - 2029793 CAGAATATTGTTTTAAATGT i proCoq1.NW_012150197v1 I 1485 C 0 s otoGar3.GL873542 22917298 20 + 22939663 CAGAATACTGTTTTAAATGT i otoGar3.GL873542 I 3809 C 0 s dasNov3.JH569290 337882 20 - 397369 CGGGTTATTGTTTTAAATAC i dasNov3.JH569290 I 5673 I 2 e canFam3.chr24 47659613 5531 + 47698779 I e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e saiBol1.JH378156 16344398 538 + 16356641 I a score=880138.000000 s hg38.chr20_KI270870v1_alt 175288 82 + 183433 CTTTGCTTATACAAGTGATATTACAGAT-CTTTGttgctatac-aaaatgcattggattttttattggaat---tgtat-catctcga s panTro5.chr20 66510709 82 + 66533130 CTTTGCTTATACAAGTGATATTACAGAT-CTTTGTTGCTATAC-AAAATGCATTGGATTTTTTATTGGAAT---TGTAT-CATCTCGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62177922 82 + 62195757 CTTTGCTTATACAAGTGATATTACAGAT-CTTTGTTGCTATAC-AAAATGCATTGGATTTTTTATTGGAAT---TGTAT-CATCTCGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564180 82 - 578057 CTTTGCTTATACAAGTGATATTACAGAT-CTTTGTTGCTATAC-AAAATGCACTGGATTTTTTATTGGAAT---TGTAT-CATCTCGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086134 82 - 110113093 ctttgcctatgcaagtgatattacagat-ctttgttgctatac-aaaatgcgttggattttttattggaat---tgtat-catcttga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825652 83 - 92844088 CTTTGCTTATACAAGTGAAATTACAGGT-CTTTGTTGCTATATAAAAATGCATTGGATTTTTTACTGGAAT---TGTAT-CATCTCGA i rheMac8.chr10 C 0 I 1 s macFas5.chr10 96491321 83 + 96509753 ctttgcttatacaagtgaaattacaggt-ctttgttgctatacaaaaatgcattggattttttactggaat---tgtat-catctcga i macFas5.chr10 C 0 I 1 s macNem1.NW_012014244v1 16961289 83 - 16982598 CTTTGCTTATACAAGTGAAATTACAGGT-CTTTGTTGCTATACAAAAATGCATTGGATTTTTTATTGGAAT---TGTAT-CATCTCGA i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3763238 83 - 3785965 CTTTGCTTACACAAGTGAAATTACAGGT-CTTTGTTGCTATACAAAAATGCATTGGATTTTTTATTGGAAT---TGTAT-CATCTCGA i cerAty1.NW_012001373v1 C 0 I 1 s chlSab2.chr2 90353218 83 - 90373283 ctttgcttatacaagtgaaattacaggt-ctttgttgctatacaaaaatgcattggattttttattggaat---tgtat-catctcga i chlSab2.chr2 C 0 I 1 s manLeu1.NW_012101652v1 154001 83 - 179258 CTTTGCTTACACAAGTGAAATTACAGGT-CTTTGttgctatacaaaaatgcattggattttttattggaat---tgtat-catctcga i manLeu1.NW_012101652v1 C 0 I 1 s colAng1.NW_012114444v1 5623518 83 - 5823884 CTTTGCTTATACAAGTGAAAGTACAGGT-CTTTGTTGCTATACAAAAATGCATTGGATTTTTTATTGGAAT---TGTGT-CATCTCGA i colAng1.NW_012114444v1 C 0 I 1 s calJac3.chr5 58181637 83 + 159171411 CTTTACTGATACAAGTGATATTAGAAAT-CTTTGttgctatataaaaatgcattggattttttattcgaat---tgtat-catcttga i calJac3.chr5 C 0 I 1 s cebCap1.NW_016107870v1 1218515 83 + 1231380 CTTTACTAATGCAAGTGATATGAGAAAT-CTTTGTTGCTATATAAAAATGCATTGGATTTTTTATTCGAAT---TGTAT-CATCTCGA i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2744528 83 + 11732439 CTTTACTAATACAAGTGATATTAGAAAT-CTTTGttgctatataaaaatgcattggattttttattcgaat---tgtat-catcttga i aotNan1.NW_018500483v1 C 0 I 1 s proCoq1.NW_012150197v1 1920007 83 - 2029793 CTTGTCTTAAACAAATGGTATTAGAAAT-CTTTGTCGTGATGCAAAAATGCATTAGACTTTTGATTAGAAT---TGTGA-TATCTAGA i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22917318 84 + 22939663 CTTCTCTTATACAAATATTGGTA-AAAT-CTTTGTTTTGATGC-ACAGTTCATTAGACTTTTGATTGGAATTTGTGTCA-TAGGTAGA i otoGar3.GL873542 C 0 I 1 s canFam3.chr24 47665144 79 + 47698779 cTTTACTT----AACTTattttagaaat-ctttgttgtatcagaaaaataagtcagacactttattggaat---tgtgt-catgtgta i canFam3.chr24 I 5531 I 3 s dasNov3.JH569290 337904 85 - 397369 CTTTATTTGTGCAAATTATATTAGAAATACTTGGTTGTATTGCAGAAATACATAGGGCTTTCAGTTGGATT---CGTGTACCTCTAGA i dasNov3.JH569290 I 2 C 0 e mm10.chr2 181846896 3780 + 182113224 I e micMur3.chr18 56928440 1946 + 57149010 I e saiBol1.JH378156 16344398 538 + 16356641 I a score=1620994.000000 s hg38.chr20_KI270870v1_alt 175370 135 + 183433 -taatttgaggattgtggccatctttacaatgtttcatctgcttatctag-aatatgaaataggggtttatatagttttatttaaggttttatacatcatttattgattctattgaaatacttgttt----------ttcattgtaA s panTro5.chr20 66510791 135 + 66533130 -TAATTTGAGGATTGTGGCCATCTTTACAATGTTTCATCTGCTTATCTAG-AGTATGAAATAGGGGTTTATATAGTTTTATTGAAGGTTTTATACATCATTTATTGATTCTATTGAAATACTTGTTT----------TTCATTATAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178004 135 + 62195757 -TAATTTGAGGATTGCGGCCATCTTTACAATGTTTCATCTGCTTATCTAG-AGTATGAAATAGGGGTTTATATAGTTTTATTGAAGGTTTTATACATCATTTATTGATTCTATTGAAATACTTGTTT----------TTCATTATAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564262 133 - 578057 -TAATTTGAGGATTGTGGCCATCTTTACAATGTTTCATCTGCTTTTCTAG-AATATGAAATAGGGGTTTATATAGTTTTATTTAAGGTTTTATACATCATTTATTGAT--GATTGAAATACTTGTTT----------TTCATTATAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086216 135 - 110113093 -tagcttggggattgtggacatctttacaatgtttcatctgcttatctag-aatatgaaataggggtttatatagttttatttaaggttttatacatcatttattgattatattgaaatgcttgttt----------ttcattataa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825736 133 - 92844088 -TAGTTTGAGGATTGTGGACATCTTTACAATGTTTCGTCTGCTTATGTAG-AATATGAAATAGGGGTT--TATAGTTTTATTTACGGTTTTATACATCATTTATTGATTATATGGAAATACTTGTTT----------TTCATTATAA i rheMac8.chr10 I 1 C 0 s macFas5.chr10 96491405 133 + 96509753 -tagtttgaggattgtggacatctttacaatgtttcgtctgcttatgtag-aatatgaaataggggtt--tatagttttatttacggttttatacatcatttattgattatatggaaatacttgttt----------ttcattataa i macFas5.chr10 I 1 C 0 s macNem1.NW_012014244v1 16961373 133 - 16982598 -TAGTTTGAGGATTGTGGACATCTTTACAATGTTTCGTCTGCTTATGTAG-AATATGAAATAGGGGTT--TATAGTTTTATTTACGGTTTTATACATCATTTATTGATTATATGGAAATACTTGTTT----------TTCATTATAA i macNem1.NW_012014244v1 I 1 C 0 s cerAty1.NW_012001373v1 3763322 133 - 3785965 -TAGTTTGAGGATTGTGGACATCTTTACAATGTTTCGTCTGCTTATGTAG-AATATGAAATAGGGgtt--tatagttttatttacagttttatacatcatttattgattataTGGAAATACTTGTTT----------TTCATTATAA i cerAty1.NW_012001373v1 I 1 C 0 s chlSab2.chr2 90353302 133 - 90373283 -tagtttgaggattgtggacatctttacaatgtttcgtctgcttatgtag-aatatgaaataggggtt--tatagttttatttacagttttATACATCATTTATTGATTATATGGAAATACTTGTTT----------TTCATTCTAA i chlSab2.chr2 I 1 C 0 s manLeu1.NW_012101652v1 154085 133 - 179258 -tagtttgaggattgtggacatctttacaatgtttcgtctgcttatgtag-aatatgaaataGGGGTT--TATAGTTTTATTTACGGTTTTATACATCATTTATTGATTATATGGAAATACTTGTTT----------TTCATTATAA i manLeu1.NW_012101652v1 I 1 C 0 s colAng1.NW_012114444v1 5623602 131 - 5823884 -TAGTTTGAGGATTGTGGACATCTTTACAGTGTTTCATCTGCTTATGTAG-AATATGAA--TGGGGTT--TATAGTTTTATATAAGGTTTTATACATCATTTATTGATTATATGGAAATACTTGTTT----------TTCATTATAA i colAng1.NW_012114444v1 I 1 C 0 s calJac3.chr5 58181721 116 + 159171411 -taatttgaggattgtggacatctttataatgtttc------------------atgaaatagaggtt--tatagtttcatttaaggtttCATACATCATTTATTGATTATATTGAAATACTTGTTT----------TTCATTATAA i calJac3.chr5 I 1 C 0 s cebCap1.NW_016107870v1 1218599 133 + 1231380 -TACTTTGAGGATTGCGGACATCTTTACAATGTTTCATCTGCTTATCTAG-AATATGAAATAGGGGTT--TATAGTTTCATTTAAGGTTTCATACATCATTTATTGATTATATTGAAATACTTGTTT----------TTCATTATAA i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2744612 131 + 11732439 -taatttgaggattgtggacatctttacaatgtttcatctgcttatctag-aacatgAAAT--GGGTT--TATAGTTTCATTTAAGGTTTCATACATCATTTATTGATTATATTGAAATACTTGTTT----------TTTATTATAA i aotNan1.NW_018500483v1 I 1 C 0 s micMur3.chr18 56930386 134 + 57149010 -TAATTTGAGAATTGTGGACATCTTTATGATGTTTCACCAGGTTATCTAACAGTATAAAATAGGAGTT--TATAGTTTTCTATAAGGTTTCGTACATCATTTATTGATTATATAAAAATATTTCATG----------TTCATTATAA i micMur3.chr18 I 1946 C 0 s proCoq1.NW_012150197v1 1920091 134 - 2029793 -TAATTTGAGAATTATGGACATCTTTATGATATTTCACCAGGTTATCTAACAATATAAAATAGGAGTA--TATAGTTTTCTATAAGGCTTCTTACATCATTTATTGATTATATAAAAATATTTGATG----------TTCATTATAA i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22917403 141 + 22939663 -TAATTTCACAATTGTGGATGTCTTTACTATATTCTGTCAGCTTATCTAAAAATACTAAATAGGAGTT--TATA---TTTCCTGAGGCTTCTTATATCATTTATCTATTATATTAAATTATTTGATGATTAAATTTCTTCATTTTAA i otoGar3.GL873542 I 1 C 0 s canFam3.chr24 47665226 132 + 47698779 -taatttgaggatcatagacatattttcagta-tccatctccttgtctgg-aacatggaatatggatt--tatagttttcctttagggttcacacattatttattgatggtttttaaatatttgatg----------tttattataa i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 337989 126 - 397369 TTAGTTTGAGGATTGTGGACAGCTTTACAATGCTTTGTCTGCACATCTAGAAATATGAAATAAGGGTG-------TTCTTTTTTAAGATTTGTGCATCATT----GCTTGTATTTAAGTATTTGATG----------TTCATTATAA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181846896 3780 + 182113224 I e saiBol1.JH378156 16344398 538 + 16356641 I a score=61999.000000 s hg38.chr20_KI270870v1_alt 175505 11 + 183433 CTAGAAATT---CT s panTro5.chr20 66510926 11 + 66533130 CTAGAAATT---CT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178139 11 + 62195757 CTAGAAATT---CT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564395 11 - 578057 CTAGAAATT---CT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086351 11 - 110113093 ctagaaatt---ct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825869 9 - 92844088 C--GACATT---CT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491538 9 + 96509753 c--gacatt---ct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961506 9 - 16982598 C--GACATT---CT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763455 9 - 3785965 C--GACATT---CT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353435 9 - 90373283 C--GACATT---CT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154218 9 - 179258 C--GACATT---CT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623733 9 - 5823884 C--GACATT---CT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181837 14 + 159171411 CTAGAAAGTCTACT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344936 14 + 16356641 cTAGAAAGTCTACT i saiBol1.JH378156 I 538 C 0 s cebCap1.NW_016107870v1 1218732 14 + 1231380 TTAGAAAGTCTACT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744743 14 + 11732439 CTAGAAAGTCTACT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56930520 11 + 57149010 CTAGAAATT---CT i micMur3.chr18 C 0 I 3 s proCoq1.NW_012150197v1 1920225 11 - 2029793 CTAGAAATT---CT i proCoq1.NW_012150197v1 C 0 I 27 s otoGar3.GL873542 22917544 11 + 22939663 GTAGAAATT---CT i otoGar3.GL873542 C 0 I 2 s canFam3.chr24 47665358 14 + 47698779 ttagaacttcagct i canFam3.chr24 C 0 I 14 s dasNov3.JH569290 338115 11 - 397369 CTAGAAGTT---CT i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181846896 3780 + 182113224 I a score=139420.000000 s hg38.chr20_KI270870v1_alt 175516 8 + 183433 -TTTAAAAA s panTro5.chr20 66510937 8 + 66533130 -TTTAAAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178150 8 + 62195757 -TTTAAAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564406 8 - 578057 -TTTAAAAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086362 8 - 110113093 -tttaaaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825878 8 - 92844088 -TTTAAAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491547 8 + 96509753 -tttaaaaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961515 8 - 16982598 -TTTAAAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763464 8 - 3785965 -TTTAAAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353444 8 - 90373283 -TTTAAAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154227 8 - 179258 -TTTAAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623742 8 - 5823884 -TTTAAAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181851 8 + 159171411 -TTTAAAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344950 8 + 16356641 -TTTAAAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218746 8 + 1231380 -TTTAAAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744757 8 + 11732439 -TTTAAAAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56930534 8 + 57149010 -TTTAAAAA i micMur3.chr18 I 3 C 0 s otoGar3.GL873542 22917557 8 + 22939663 -TTTAAAAA i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181850676 8 + 182113224 -TTCAAAAA i mm10.chr2 I 3780 C 0 s canFam3.chr24 47665386 8 + 47698779 -tttaaaaa i canFam3.chr24 I 14 I 163 s dasNov3.JH569290 338126 8 - 397369 TTTTAAAA- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920236 27 - 2029793 I a score=19932.000000 s hg38.chr20_KI270870v1_alt 175524 18 + 183433 TGT--------------------------------TTAAA-TAAAC--ATATG s panTro5.chr20 66510945 16 + 66533130 TGT--------------------------------TTAAA-TAAAC----ATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178158 16 + 62195757 TGT--------------------------------TTAAA-TAAAC----ATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564414 14 - 578057 TGT--------------------------------TTAAA-CAT------ATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086370 20 - 110113093 tgt--------------------------------ttaaa-tgtataAAAATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825886 14 - 92844088 TGT--------------------------------TTAAA-CAC------ATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491555 14 + 96509753 tgt--------------------------------ttaaa-cac------atg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961523 13 - 16982598 TGT--------------------------------TTAAA-C-C------ATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763472 14 - 3785965 TGT--------------------------------TTAAA-CAT------ATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353452 14 - 90373283 TGT--------------------------------TTAAA-CAT------ATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154235 14 - 179258 TGT--------------------------------TTAAA-CAT------ATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623750 14 - 5823884 TGT--------------------------------TTAAA-CAT------ATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181859 18 + 159171411 TGT--------------------------------TTAAA-TAAACAT--AAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344958 18 + 16356641 TGT--------------------------------TTAAA-TAAACAC--AAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218754 18 + 1231380 TGT--------------------------------TTAAA-TAAACAC--AAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744765 18 + 11732439 TGT--------------------------------TTAAA-TAAATAT--AAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56930542 15 + 57149010 TGT--------------------------------TTTTGAAAA------ATG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22917565 14 + 22939663 TGT--------------------------------TTTAG-AAA------ATG i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181850684 17 + 182113224 TTT--------------------------------CTGAA-AAGAAT---ATG i mm10.chr2 C 0 C 0 s canFam3.chr24 47665557 46 + 47698779 tgtactttctttttctgaaatgaataaataaaatcttaaa-aaa------atg i canFam3.chr24 I 163 I 14 s dasNov3.JH569290 338134 5 - 397369 TGT--------------------------------GT---------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920236 27 - 2029793 I a score=2916559.000000 s hg38.chr20_KI270870v1_alt 175542 200 + 183433 TTTTGCTGGTATACAAGAAT-------GT-------TTGTTGATATTTACTTAG-TACGTGGCGAC-TTAATCC-TTTTAGTTATAAGATTCATGACATAGAATCTTAGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATATAATCATAGCATGAAAGAACTGACCAGAAATAGTTTTGTGACCTGTGTAGGCCACTTGGA s panTro5.chr20 66510961 200 + 66533130 TTTTGCTGGTATACAAGAAT-------GT-------TTGTTGATATTTACTTAG-TACGTGGCGAC-TTGATCC-TTTTAGTTATAAGATTCATGACATAGAATCTTAGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATATAATCATAGCATGAAAGAACTGACCAGAAATAGCTTTGTGACCTGTGTAGGCCACTTGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178174 200 + 62195757 TTTTGCTGGTATACAAGAAT-------GT-------TTGTTGATATTTACTTAG-TACGTGGCGAC-TTGATCC-TTTTAGTTATAAGATTCATGACATAGAATCTTAGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATATAATCATAGCATGAAAGAACTGACCAGAAATAGCTTTGTGACCTGTGTAGGCCACTTGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564428 200 - 578057 TTTTGCTGGTATACAAGAAT-------GT-------TTGTTGATATTTACTTAG-TACGTGGTGAC-TTAATCC-TTTCAGTTACAAGATTCATGACATAGAATCTTGGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCTAGCGTATAATCATAGCATGAAAGAACTGACCAGAAATAGTTCTGTGGCCTGTGTAGGCCACTTGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086390 201 - 110113093 ACTTGATGGTATACAAGAAT-------GT-------TTGTTGATATTTACTTAGTTACATGGCTAC-TTAATCC-TTTTAGTTATAAGATTCATGACATAGAATCTTAGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATATAATCATAGCATGAAAGAACTGACCAAAAATAGTTTTATGACCTGTGTAGGCTACTTGGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92825900 199 - 92844088 TTTTGCTGCTATATAAGAAT-------GT-------TTGTTGATGTTTACTTAG-TACATGGCTA--TTAATCC-TTTAAGTTATGAGATTTGTGACATAGAATCTTAGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATGTAATCATAGCATGAAAGAACTGACCAAAAATAGTTTTGTGACCTGTGTAGGCCACTTGGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491569 199 + 96509753 ttttgctgctatataagaat-------gt-------ttgttgatgtttacttag-tacatggcta--ttaatcc-tttaagttATGAGATTTGTGACATAGAATCTTAGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATGTAATCATAGCATGAAAGAACTGACCAAAAATAGTTTTGTGACCTGTGTAGGCCACTTGGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961536 200 - 16982598 TTTTGCTGCTATATAAGAAT-------GT-------TTGTTGATGTTTACTTAG-TACATGGCTAC-TTAATCC-TTTAAGTTACGAGATTTGTGACATAGAATCTTAGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATGTAATCATAGCATGAAAGAACTGACCAAAAATAGTTTTGTGACCTGTGTAGGCCACTTGGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763486 196 - 3785965 TTTTGCTGCTATATAAGAA------------------TGTTGATGTTTACTTAG-TACATGGCTAC-TTAATCC-TTTAAGTTATGAGATTTGTGACGTAGAATCTTAGTTTTTAAAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATGTAATCATAGCATGAAAGAACTGACCAAAAATAGTTTTGTGACCTGTGTAGGCCACTTGGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353466 200 - 90373283 TTTTGCTGCTATACAAGAAT-------TT-------TTGTTGATGTTTACTTAG-TACATGGCTAC-TTAATCC-TTTAAGTTATGAGATTTGTGACATAGAATCTTAGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATGTAATCATAGCATGAAAGAACTGACCAAAAATAGTTTTGTGACCTGTGTAGGCCACTTGGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154249 200 - 179258 TTTTGCTGCTATATAAGAAT-------GT-------TTGTTGATGTTTACTTAG-TACATGGCTAC-TTAATCC-TTTAAGTTATGAGATTTGTGACATAGAATCTTAGTTTTTAGAGGATTTACTGACTTAGATATTTTTAGAAAAGGCCAGCATGTAATCATAGCATGAAAGAACTGACCAAAAATAGTTTTGTGACCTGTGTAGGCCACTTGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623764 200 - 5823884 TTTTGCTGCTATACAAGAAT-------GT-------TTGTTGATATTTGCTTAG-TACATGGCTAC-TTAATCC-TTTAAGTTATGAGATTTGTGACATAGAATCTTAGTTTTTAGAGGATTGACTGACTTGGATATTTTTAGAAAAGGCCAGCAGGTAATCATAGCATGAAAGAACTGACCAAAAATAGTTTTGTGACCTGTGTAGGCCACTTGGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58181877 201 + 159171411 TTTTGCTGGTATACAAGAAT-------GT-------TAGTTGATGTTTACCTAG-TACATGGCTAC-TTAATCCTTTTAGGTTAAAAGATTCATGACATAGAATCTTAGTTTTTAGTGGATTTACTGACTTTGATATTTTTAGAAAAGATCAGCATATAATCATAGCATGAAAGAACTGACCAAAAATAGTTCCGTGACCTGGGTAGGCCACTTGGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16344976 188 + 16356641 TTTTGCTGATATACAAGAAT-------GT-------TAGTTGATGTTTACCTAG-TACATGGCTAC-TTAGTCCTTTTAAGTTATAAGATTCATGACATAGAATCTTAGTTTTTAGTGGATTTACTGACTTTGATATTTTTAGAAAAGACC-------------AGCATGAAAGAACTGACCAAATATAGTTCCATGACCTGCGTAGGCCACTTGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218772 186 + 1231380 TTTTGCTGATATACAAGAAT-------GT-------TAGTTGATGTTTACCTAG-TGCATAGCTAC-TTAGTCC-TTTAAGTTATAA-ATTCATGACGTAGAATCTTAGTTTTTAGTGGATTTACTGACTTTGATATTTTTAGAAAAGACA-------------AGCATGAAAGAATTGATGAAAAATAGTTCCGTGACCTGTGTAGGCCACTTGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744783 200 + 11732439 TTTTGCTGGTATACAAGAAT-------GT-------TAGTTGATGTTTACCTAG-TACCTGGCTAC-TTAATCC-TTTAAGTTATAAGATTCATGATATAGAATCTTAGTTTTTATTGGATTTACTGACTTTGATATTTTTAGAAAAGACTAGCATATAATCATAGCATGAAAGAACTGACCAAAAATAGCTCCGTGACCTGTGTAGGCCACGTGGA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56930557 207 + 57149010 TTTTGCTAGTATTTAAGAATATGATCAGT-------TTTTTGATGTTTATCTAG-TACATGGCTGC-TTATTCC-TTTTAGTTCTAAGATTCATGAAATAGAGTCTTAGTTTGTAGAGGATTTACTGGCTTAGATATTTTTAGAAATGGCTAGCATATAATCATAGCATGACAGAGCTGACCCAAAATAGTACTGTGAGCTGTTTAGGCCATTTGGA i micMur3.chr18 C 0 I 40 s proCoq1.NW_012150197v1 1920263 206 - 2029793 TTTTGCTAGTATATAAGAATATGATTAGT-------TTGTTGATGTTTACCTAG-TGCATGGCTGC-TTATTCC-TTTTAGTTCTAAAATTCATGACATAGAGTCTTAG-TTGTAGAGGATTTACTGGCTTAGATATTTTTAGAAATGACTAGCATATAATCATAGCATGACAGAGGTGACCCAAAATAGTACTGTGAGCTGTTTAGGCCATTTAGA i proCoq1.NW_012150197v1 I 27 C 0 s otoGar3.GL873542 22917580 207 + 22939663 TTTTGCTAGTATATAAGAACGTGATTAGT-------TTATTGATGTTTACCTAG-TACATGGCTAC-TTACTTC-TTTCAGTTCTAAGATTCATGACATAGGTGCTTACTTTGTAGAAGATTTACTAGCTTAGGTATTTTTAGAAATGACTAGCATATAATCATAGCATGACAGAGCTGACCCAAAATAGTACTGTGACCTGTTTAGGCCATTTGGA i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181850701 148 + 182113224 -TTTGCTCTC-------AAT-------AT--------AATTAATCTTTAGTAAT-TGTA---CTGT-TTAATCC-TTTTAG------------------AGAATCTTA-TTTTTGGATGAGTTTCTGGGTTAGATGTTTTTAGAAAAGATAATCATATAATCTTCTC---------------------AGTCTTATGACCTATTAAGGGCATATGTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47665617 205 + 47698779 ttttgctggtacacaagaat-------gtgagtgacttactgatgtttatctag-tatgtggctactttaatgc-tttcagttctaagattcatgacatagaatcatagtttttagaggatttgctggcttaggtatttttagacaag---aatgtataatctTAACATGTCAAAGCCAAGCAAAAATAACACCGTGACCTGCTTGGGCCTTTCAGA i canFam3.chr24 I 14 C 0 s dasNov3.JH569290 338139 192 - 397369 --TTGCTGGTATTCAAGAATACGATTAAA-------TTCTTGATGTTTATCTAG-TAAATGCTACT-TTAATCC-TTTTAGTTCTAATATTTTTGACATAG--TCTTAATTTTTAGAGGATTT----------ATATTGTTGGACAAGGCTAGCATATACCCTTAGCATGACAGAGCTTACCAAAAATAGTACGGTGACTTG-GTAGGCAATCTGGA i dasNov3.JH569290 C 0 C 0 a score=289197.000000 s hg38.chr20_KI270870v1_alt 175742 20 + 183433 GACTGACCCAGCCACACAGA s panTro5.chr20 66511161 20 + 66533130 GACTGACCCAGCCACACAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178374 20 + 62195757 GACTGACCCAGCCACACAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564628 20 - 578057 GACTGACCCAGCCACGCAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086591 20 - 110113093 GACTGACCCAGCCACACAGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826099 20 - 92844088 GACTGACCCAGCCACACAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491768 20 + 96509753 GACTGACCCAGCCACACAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961736 20 - 16982598 GACTGACCCAGCCACACAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763682 20 - 3785965 GACTGACCCAGCCACACAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353666 20 - 90373283 GACTGACCCAGCCACACAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154449 20 - 179258 GACTGACCCAGCCACACGGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623964 20 - 5823884 GACTGACCCAGCTGCACAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182078 20 + 159171411 GACTGACCCAGCCACGTGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345164 20 + 16356641 GACTGACCCAGCCACGTGGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218958 20 + 1231380 GACTGACCGAGCCACGTGGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2744983 20 + 11732439 GACTGACCCAGCCACGCGGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1920469 20 - 2029793 GAGTGGCCCAGTCACACAGA i proCoq1.NW_012150197v1 C 0 I 17 s otoGar3.GL873542 22917787 20 + 22939663 GACTGGCCTAGTCACATAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181850849 20 + 182113224 GACTGTCCTAGTCACAATGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47665822 20 + 47698779 AGCTGGCACCATCACACAGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 338331 19 - 397369 GACTAACCAAA-CACACAGA i dasNov3.JH569290 C 0 I 7 e micMur3.chr18 56930764 40 + 57149010 I a score=170733.000000 s hg38.chr20_KI270870v1_alt 175762 15 + 183433 GTGCAC-AG-AGGGTCA s panTro5.chr20 66511181 15 + 66533130 GCACAC-AG-AGGGTCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178394 15 + 62195757 GCACAC-AG-AGGGTCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564648 15 - 578057 GCGCAC-AG-AGGGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086611 14 - 110113093 GCGCAC-AG-A-GGTCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826119 15 - 92844088 GCACAC-AG-AGGGTCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491788 15 + 96509753 GCACAC-AG-AGGGTCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961756 15 - 16982598 GCACAC-AG-AGGGTCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763702 15 - 3785965 GCACAC-AG-AGGGTCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353686 15 - 90373283 GCACAC-AG-AGGGTCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154469 15 - 179258 GCACAC-AG-AGGGTCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623984 15 - 5823884 GCACAC-AG-AGGGTCC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182098 15 + 159171411 GCACAC-AG-AGGGTTG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345184 15 + 16356641 GCGCAC-AG-AGGGTCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218978 15 + 1231380 GCACAC-AG-AGGGTCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2745003 15 + 11732439 GCACAC-AG-AGGGTCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22917807 13 + 22939663 --ACAC-AT-GGGGCCA i otoGar3.GL873542 C 0 I 3 s mm10.chr2 181850869 15 + 182113224 ACACAT-AG-AGGCTGT i mm10.chr2 C 0 I 2 s canFam3.chr24 47665842 16 + 47698779 ACATATAAG-AGGGCCA i canFam3.chr24 C 0 I 3 s dasNov3.JH569290 338357 16 - 397369 GTAGTC-AGCAGGGGTG i dasNov3.JH569290 I 7 C 0 e proCoq1.NW_012150197v1 1920489 17 - 2029793 I e micMur3.chr18 56930764 40 + 57149010 I a score=299623.000000 s hg38.chr20_KI270870v1_alt 175777 27 + 183433 TGTCTAATTGTGGTCT-CTGGTGCTCGT s panTro5.chr20 66511196 27 + 66533130 TGTCTCATTGTGGTCT-CTGGTGCTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178409 27 + 62195757 TGTCTCATTGTGGTCT-CTGGTGCTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564663 27 - 578057 TGTCTAATTGTGGTCT-CTGGTGCTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086625 27 - 110113093 TGTCTAATTGTGGTCT-CTGGTGCTCCT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826134 27 - 92844088 TGTCTAATTGTGTTCT-CTGGTGCTCCG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491803 27 + 96509753 TGTCTAATTGTGTTCT-CTGGTGCTCCG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961771 27 - 16982598 TGTCTAATTGTGTTCT-CTGGTGCTCCG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763717 27 - 3785965 TGTCTAATTGTGTTCT-CTGGTGCTCTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353701 27 - 90373283 TGTCTAATTGTGTTCT-CTGGTGCTCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154484 27 - 179258 TGTCTAATTGTGTTCT-CTGGTGCTCCG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5623999 24 - 5823884 TGTCTCATTGTGTTCT-CTGGTGCT--- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182113 27 + 159171411 TATCTAAGAAGGTTCT-CTGGTGCTCCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345199 27 + 16356641 TGTCTAAGTGGGTTCT-CTGGTGCTCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1218993 27 + 1231380 TGTCTAAGTGGGTTCT-CTGGTGCTCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2745018 27 + 11732439 TGTCTAAGTGGGTTCT-CTGGTGCTCCT i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1920506 27 - 2029793 TGTCTGATTGGGTTGT-CTGGTGCTCCC i proCoq1.NW_012150197v1 I 17 C 0 s otoGar3.GL873542 22917823 10 + 22939663 TGTCTAATTG------------------ i otoGar3.GL873542 I 3 C 0 s mm10.chr2 181850886 24 + 182113224 AGTTTAATTGGATTCT-TTGGTACT--- i mm10.chr2 I 2 C 0 s canFam3.chr24 47665861 27 + 47698779 TGTCTGTCTAGGTTCT-TTGGTACCCCT i canFam3.chr24 I 3 C 0 s dasNov3.JH569290 338373 28 - 397369 GGTCAAAGTGGACTCTCCTGGTACTCCT i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56930764 40 + 57149010 I a score=1402375.000000 s hg38.chr20_KI270870v1_alt 175804 100 + 183433 AATACTTTAATTCAAAAGAAATGTTTTGATGGCCTACACTGGAGTGTGTTAAGCCACCAGATTCCGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC s panTro5.chr20 66511223 100 + 66533130 AATACTTTAATTCAAAAGAAATGTTTTGATGGCCTACACTGGAGTGTGTTAAGCCACCAGATTCCGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178436 100 + 62195757 AATACTTTAATTCAAAAGAAATGTTTTGATGGCCTACACTGGAGTGTGTTAAGCCACCAGATTCCGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564690 99 - 578057 AATACTTCAATTCAAAAGAAATGTTTTGATGACCTACACTGGAGTGTGTTAAGCCACCAGATTCCGGTGCTTTCGT-GGGGTGATATCAGGGCAAGGCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086652 100 - 110113093 AATACTTTAATTCAAAAGAAATGTTTTGATGACCTACACTGGAGTGTGTTAAGCCACCAGATTCTGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826161 100 - 92844088 AATACTTGAATTCAAAAGAAATGTTTTGATGACCTACACTGGAGTGTGTTAAGCCACCAGATTCCGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491830 100 + 96509753 AATACTTGAATTCAAAAGAAATGTTTTGATGACCTACACTGGAGTGTGTTAAGCCACCAGATTCCGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961798 100 - 16982598 AATACTTGAATTCAAAAGAAATGTTTTGATGACCTACACTGGAGTGTGTTAAGCCACCAGATTCCGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763744 100 - 3785965 AATACTTGAATTCAAAAGAAATGTTTTGATGACCTACACTGGAGTATGTTGAGCCACCAGATTCCGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353728 100 - 90373283 AATACTTGAATTCAAAAGAAATGTTTTGATGACCTACACTGGAGTATGTTAAGCCACCAGATTCCGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154511 97 - 179258 AATACTTGAATTCAAAAGAAATGTTTTGATGACCTACCCTGGAGTATGTTAAGCCACCAGATCCCGGTGCTTTCGTGGGGGTGATACCAGGGCACGG--- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624023 100 - 5823884 AATACTTGAATTCAAAAGAAATGTTTTGATGACCTACACTGGAGTATGTTAAGCCACCGGATTCCGGTGCTTTCGTGGGGGTGATATCAGGGCAAGGCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182140 100 + 159171411 AATACTTTAATTCAAGAGAAATGTTTTGATGACCTACACTGCAGTATGTTAAGCCACTAGATTCCAGTGCTTTTGCGGGGCTGATGTCAGGGCAAGGCTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345226 100 + 16356641 AATACTTTAATTCAAAAGAAATGTTTTGATGACCCACACTGCAGTATGTTAAGCCACCAGATTCCAGTGCTTTCATGGGGGTGATGTCAGGGCAAGGCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219020 99 + 1231380 AATACTTTAATTCAAAAGAAATG-TTTGATGACCTACACTGCAGTATGTTAAGCCACCAGATCCCAGTGCTTTCGTGGGGGTGATGTCAGGGCAAGGCTC i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2745045 100 + 11732439 AATACTTTAATTCAAGAGAAACGTTTTGATGACCTACACTTCAGTATGTTAAGCCACCAGATTCCAGCGCTTTCGTGGGGGTGATGTCAGGGCAAGGCTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56930804 99 + 57149010 AATATTTTAATTCAAAAGAAATGTTTTGATAACCTACAGTACAGTGTGTT-AGCCACAAAATTTCAGTGTTTTCCTGGGGCTGATGCTAGGGCGAGGCTT i micMur3.chr18 I 40 C 0 s proCoq1.NW_012150197v1 1920533 99 - 2029793 GATATTTTAATTCAAAAGAAATGTTTTGATAACCTACAGTGCAGTGTGTT-AGGCACAAAGTTTCACTGCTTTCTTGGGGCTGATGCTAGGGCGAGGCTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22917833 82 + 22939663 ----------------GGAAATGTTTTGATAATTTACATTGCAGTCTGTT-AGCCACCAAATGTCAGTGCATTCTTGGGG-TGATGTCAGGGTGAAACTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181850910 90 + 182113224 AATCCTATAATATA----AAGTGCTTTGATGACCCACACTGTAGTCTATC-AGCTAGCATATTCCACCGCACCCCTGAAG-TGCTGTCAGTGAGAG---- i mm10.chr2 C 0 C 0 s canFam3.chr24 47665888 68 + 47698779 AATACTGTGACTTGTAAGAAATGTTTTGATGACCTTCACTG----------------------CCAGTCTTTGTGTTGTGGTGATGTCAC---------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 338401 98 - 397369 GACACTTTAATTCATAACAAATGTATTGATTACTGAAACTTTAGAATGTG-AGCCACCAAACTCCACTGCTGCTGTGGGG-CAATGTCCTGGTGAGGTTT i dasNov3.JH569290 C 0 C 0 a score=320894.000000 s hg38.chr20_KI270870v1_alt 175904 30 + 183433 ATTtaaacacttcagtatttgtctccaaag s panTro5.chr20 66511323 30 + 66533130 ATTTAAACACTTCAGTATTTGTCTCCAAAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178536 30 + 62195757 ATTTAAACACTTCAGTATTTGTCTCCAAAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564789 30 - 578057 ATTTAAACACTTCAGTATTTGTCTCCAAAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086752 30 - 110113093 ATTTAAACACTTCAGTATTTGTCTCCAAAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826261 30 - 92844088 ACTTAAACACTTCGGTGTTTGTCTCCAAAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491930 30 + 96509753 ACTTAAACACTTCGGTGTTTGTCTCCAAAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961898 30 - 16982598 ACTTAAACACTTCGGTGTTTGTCTCCAAAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763844 30 - 3785965 ACTTAAACACTTCGGTGTTTGTCTCCAAAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353828 30 - 90373283 ACTTAAACACTTCAGTGTTTGTCTCCAAAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154608 29 - 179258 -CTTAAACACTTCGGTGTTTGTCTCCAAAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624123 30 - 5823884 ACTTAAACACTTCAGTGTTTGTCTCCAAAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182240 30 + 159171411 CTTTAAACATTTCAGTATTTATCTCCAAAG i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2745145 30 + 11732439 ATTTAAGCATTTCAGTATTTATCTCCAAAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56930903 30 + 57149010 GTTTAAACGCGTCAGTATTTATCTTCAAAG i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1920632 30 - 2029793 GTTTAAACACTTCAGTATTTGTCTTCAAAG i proCoq1.NW_012150197v1 C 0 I 6207 s otoGar3.GL873542 22917915 30 + 22939663 GTTTCAGTGCTTCAGTACTTATCTCCAAAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47665956 8 + 47698779 ATAGAAAC---------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 338499 30 - 397369 GTTTCAACACTTGAGTATATATTGCCTAAG i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181851000 0 + 182113224 C e saiBol1.JH378156 16345326 0 + 16356641 C e cebCap1.NW_016107870v1 1219119 1 + 1231380 I a score=142114.000000 s hg38.chr20_KI270870v1_alt 175934 12 + 183433 catgaggataat s panTro5.chr20 66511353 12 + 66533130 CATGAGGATAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178566 12 + 62195757 CATGAGGATAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564819 12 - 578057 CATGAGGATAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086782 12 - 110113093 CATGAGGATAAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826291 12 - 92844088 CATGAGGATAAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491960 12 + 96509753 CATGAGGATAAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961928 12 - 16982598 CATGAGGATAAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763874 12 - 3785965 CATGAGGATAAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353858 12 - 90373283 CATGAGGATAAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154637 12 - 179258 CCTGAGGATAAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624153 12 - 5823884 CATGAGGATCAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182270 12 + 159171411 CATGAGGATAAT i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2745175 12 + 11732439 CATGAGGATAAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56930933 12 + 57149010 AATGAGGATAAT i micMur3.chr18 C 0 I 446 s otoGar3.GL873542 22917945 12 + 22939663 AATAAGGATAAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181851000 10 + 182113224 --TAAGGACAGT i mm10.chr2 C 0 C 0 s dasNov3.JH569290 338529 12 - 397369 AATGGGGATAAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e canFam3.chr24 47665964 0 + 47698779 C e saiBol1.JH378156 16345326 0 + 16356641 C e cebCap1.NW_016107870v1 1219119 1 + 1231380 I a score=552887.000000 s hg38.chr20_KI270870v1_alt 175946 67 + 183433 tgcc-cagg-catccaagatgacaagtttgcatttaaaaaagtaacagggattc--tgtaa----cagtatctgt s panTro5.chr20 66511365 67 + 66533130 TGCC-CAGG-CATCCAAGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATTC--TGTAA----CAGTATCTGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178578 67 + 62195757 TGCC-CAGG-CATCCAAGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATTC--TGTAA----CAGTATCTGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564831 67 - 578057 TGCC-CAGG-CATCCAAGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATTC--TGTAA----CAGTATCTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086794 67 - 110113093 TGCC-CAGG-CATCCAAGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATTC--TGTAA----CAGGATCTGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826303 69 - 92844088 TGCC-CAGG-CATCCGAGATGACAAGTTTGCTTTTAAAAAAGTAATAGGGATTCTATATAA----CAGTATCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96491972 69 + 96509753 TGCC-CAGG-CATCCAAGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATTCTATATAA----CAGTATCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16961940 69 - 16982598 TGCC-CAGG-CATCCAAGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATTCTATATAA----CAGTATCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763886 69 - 3785965 TGCC-CAGG-CATGCAAGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATTCTATATAA----CAGTATCTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353870 69 - 90373283 TGCC-CAGG-CATCCAAGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATTCTATATAA----CAGTATCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154649 69 - 179258 TGCC-CAGG-CATCCAAGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATTCTATATAA----CAGTATCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624165 67 - 5823884 TGCC-TAGG-CGTCCGAGATGACAAGTTTACATTTAAAAAAGTAACAGGGATCC--CGTAA----CGGTGTCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182282 68 + 159171411 TGCC-TAGGATTTCCAGGATGACAAGTTTGCATTTAAAAAAGTAACAGGGATAC--TGTAA----CAGTATCTGT i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2745187 68 + 11732439 TGCC-TAGGATTTCCAGGTTGACAAGTTTGCATTTAAAAAAGTAACAGGCATAC--TGTAA----CAGTATCTGT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22917957 67 + 22939663 CACC-TGGA-TATTCAAGATGACAGGTTTACATCTAAGAAAGTAACAATGATAC--TGTAG----TAATATCTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181851010 68 + 182113224 TGCCTTAGG-TATCTAGTATGACACATTGATGTTGATGAAAATTACAGCAACAA--GGTTT----TAGCGTCTGG i mm10.chr2 C 0 I 90 s canFam3.chr24 47665964 42 + 47698779 ---------------------------TCACCCTCAAGGAAGTCACTGTGAAAC--TGCAG----CAGTAGCTGC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 338541 59 - 397369 ---C-TACG-TATTCAGAATGCCCTGTTCTTATTT---------ACAGTGGTTT--TGTAATACCCATTATCTAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e micMur3.chr18 56930945 446 + 57149010 I e saiBol1.JH378156 16345326 0 + 16356641 C e cebCap1.NW_016107870v1 1219119 1 + 1231380 I a score=106417.000000 s hg38.chr20_KI270870v1_alt 176013 17 + 183433 ------tactacagtgcctatca---- s panTro5.chr20 66511432 17 + 66533130 ------TACTACAGTGCCTATCA---- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178645 17 + 62195757 ------TACTACAGTGCCTATCA---- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564898 17 - 578057 ------GACTACAGTGCCTATCA---- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086861 17 - 110113093 ------TACTACAGTGCCTGTCA---- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826372 17 - 92844088 ------GACTACAGTGCCTATCA---- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492041 17 + 96509753 ------GACTACAGTGCCTATCA---- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962009 17 - 16982598 ------GACTACAGTGCCTATCA---- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763955 17 - 3785965 ------GACTACAGTGCCTATCA---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353939 17 - 90373283 ------GACTACAGTGCCTATCA---- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154718 17 - 179258 ------GACTACAGTGCCTACCA---- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624232 17 - 5823884 ------GACTACAGGGCCCGTCA---- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182350 17 + 159171411 ------TACTATAGTGCCTATCG---- i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2745255 17 + 11732439 ------TACTACAGTGCCTGTCG---- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22918024 16 + 22939663 ------TATT-TGGTGCCTATCA---- i otoGar3.GL873542 C 0 I 634 s canFam3.chr24 47666006 12 + 47698779 -----------TGTTGGCTATGT---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 338600 27 - 397369 TACATAGTCAAAACTTCCCACTTGTTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e mm10.chr2 181851078 90 + 182113224 I e micMur3.chr18 56930945 446 + 57149010 I e saiBol1.JH378156 16345326 0 + 16356641 C e cebCap1.NW_016107870v1 1219119 1 + 1231380 I a score=-17458.000000 s hg38.chr20_KI270870v1_alt 176030 13 + 183433 --ggactta------------------------gccacc-- s panTro5.chr20 66511449 13 + 66533130 --GGACTTA------------------------GCCACC-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178662 13 + 62195757 --GGACTTA------------------------GCCACC-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564915 13 - 578057 --GGACTTA------------------------GCCACC-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086878 13 - 110113093 --GGACTTA------------------------GCCACC-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826389 29 - 92844088 --GGAGTTACGCCCGCCGC--------TCCCTCCCCCCG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492058 29 + 96509753 --GGAGTTACGCCCGCCGC--------TCCCTCCCCCCG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962026 29 - 16982598 --GGAGTTACGCCCGCCGC--------TCCCTCCCCCCG-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3763972 29 - 3785965 --GGAGTTACACCCGCCGC--------CCCCTCCCCCCG-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353956 29 - 90373283 --GGAGTTACGCCCGCCGC--------CCCCTCCCCCCG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154735 28 - 179258 --GGAGTTACGCCCGCCG---------CCCCTCCCCCCG-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624249 22 - 5823884 --GGAGTTAGGCCGGCCG---------------CCCCCG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182367 12 + 159171411 --GGAGTTA------------------------GCCCC--- i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2745272 12 + 11732439 --GGAGTTA------------------------GCCCC--- i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47666018 34 + 47698779 ----GGTCA-CCTTGTTGCAAGAAGATTTTTTTGTTTCT-- i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 338627 27 - 397369 GAAGAATGTCTTTTATAGC--------------ACCCCACT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e mm10.chr2 181851078 90 + 182113224 I e micMur3.chr18 56930945 446 + 57149010 I e saiBol1.JH378156 16345326 0 + 16356641 C e cebCap1.NW_016107870v1 1219119 1 + 1231380 I e otoGar3.GL873542 22918040 634 + 22939663 I a score=961241.000000 s hg38.chr20_KI270870v1_alt 176043 132 + 183433 ctcccaataacaacaggt-cagga-----ttcagt----------------------tggttg-------------gtaac----gtatctgtaattactttttgctttagaacagacccc--ctt---ttcaccctcaatattgacttttt-tggagagtgctagagcattg-tcttataaga s panTro5.chr20 66511462 132 + 66533130 CTCCCAATAACAACAGGT-CAGGA-----TTCAGT----------------------TGGTTG-------------TTAAC----GTATCTGTAATTACTTTTTGCTTTAGGACAGAcccc--ctt---ttcaccctcagtattgacttttt-tggagagtgctagagcattg-tcttataaga i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178675 132 + 62195757 CTCCCAATAACAACAGGT-CAGGA-----TTCAGT----------------------TGGTTG-------------TTAAC----GTATCTGTAATTACTTTTTGCTTTAGGACAGAcccc--ctt---ttcaccctcagtattgacttttt-tggagagtgctagagcattg-tcttataaga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 564928 132 - 578057 CTCCCAATAACAACAGGT-GAGGA-----TTcagt----------------------tggttg-------------ttaac----gtatctgtaattattttttactttagaacagactcc--ctt---ttcaccctcaatattgacttttt-tggatagtgctagagcattg-tcttataaga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110086891 131 - 110113093 CTCCCAATAACAACAGGT-CAGGA-----TTcagt----------------------tggttg-------------ttaac----gtctctgtaattactttttactttagagcagacccc--ctt---ttcaccctcaatattgacttctt-tggagagtgctggagca-tg-tcttgtacga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826418 132 - 92844088 CCCCCAGTAACAACAGGT-CAGGA-----TTCAGT----------------------TGGTTA-------------TTAAC----ATATCTTTAATTACTTTATACTTTAGAACAGAcccc--ctt---ttcaccctcaatgttgacttttt-tggagagtgctagagcattg-tcttataaga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492087 132 + 96509753 CCCCCAGTAACAACAGGT-CAGGA-----TTCAGT----------------------TGGTTA-------------TTAAC----ATATCTTTAATTACTTTATACTTTAGAACAGAcccc--ctt---ttcaccctcaatgttgacttttt-tggagagtgctagagcattg-tcttataaga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962055 132 - 16982598 CCCCCAGTAACAACAGGT-CAGGA-----TTCAGT----------------------TGGTTA-------------TTAAC----ATATCTGTAATTACTTTATACTTTAGAACAGAcccc--ctt---ttcaccctcaatgttgacttttt-tggagagtgctagagcattg-tcttataaga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764001 132 - 3785965 CCCCCAGTCACAACAGGT-CAGGA-----TTCAGT----------------------TGGTTA-------------TTAAC----ATATCTTCAATTACTTTATACTTTAGAACAGAcccc--ctt---ttcaccctcaatgttgacttttt-tggagagtgctagagcattg-tcttataaga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90353985 132 - 90373283 CCCCCAGTAACAACAGGT-CAGGA-----TTCAGT----------------------TGGTTA-------------TTAAC----ATATCTTTAATTACTTTATACTTTAGAACAGAcccc--ctt---ttcaccctcaatgttgacttttt-tggagagtgctagagcattg-tcttataaga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154763 128 - 179258 CCCCCAGTAACAACAGGT-CAGGA-----TTCAAT----------------------TGGTTA-------------TTAAC----ATATCT----TTGCTTTATACTTTAGAACAGATCCC--CTT---TTCACCCTCAATGTTGACTTTTT-TGGAGAGTGCTAGAGCAttg-tcttataaga i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624271 132 - 5823884 CCCCCAGTAACAACAGGT-CTGGA-----TTCAGT----------------------TGGTGA-------------TTGAC----ATACCTTTAATTACTTTATACTTTAAAACAGACCCC--CTT---TTCACCCTCAGTGTTGACTTGTT-TGGAGAGTGCTAGAGCATTG-TCTGACAAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182379 130 + 159171411 CCACCAATAAAAGCAGGT-CAGGA-----TTCagt----------------------tggttg-------------gt-at----gtatctttaattactttttactttagaacagacccc--ctt---ttcaccctcaatattgactttttttggagagtgcaagagcgt---tcttccaaga i calJac3.chr5 C 0 C 0 s aotNan1.NW_018500483v1 2745284 130 + 11732439 CCACCAGTGAAAGCAGGT-CAGGA-----TTCGGT----------------------TGGTTG-------------GT-AC----ATATCCGTAATTACTTTTTACTTTAGAACAGACCCC--TTT---TTCACCCTCAATATTGACTTTTTCTGGAGAGTGCAAGAGTGT---TCTTACAaga i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181851168 146 + 182113224 CTCCTGATAGCAGCACAT--AGAA-----TTCAGGGTAAA-----------------TGGTTGAAGTATTGTAGCCGTTGT----ACATCTTTGGTTAGTTT-TAC-TGAGGACAGGCCCT--CCCCGACTTACCTTCAGCC---ACTGTTT-TGAAGAATCCTAAAAAGTTATTTTTATAA-- i mm10.chr2 I 90 C 0 s canFam3.chr24 47666054 135 + 47698779 CCTCCAGAAACAATAGCC-TTGAGGTCCTTGCAGG----------------------TGATCC-------------TGAATGTGAATGTCTTTAATGACTTT-GACTTTAGAACACCCGCCAGCCC---CTTACTGTTGGCACTGACTCTTG-AGGAGAGCCCAGGGAAGTTG-TCT------- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 338654 138 - 397369 CTCCCG--AAAAACAGACCCAGAA-----TTTAGTATAGGTTCAGGGCACTGCAAGTTGGTTA-------------TT-TT----ATGTCTTTTATTGCTTT-TACTTTAGAATGGCCATC--CTT------------GACGTTGACATTTTCTGGTGAGCCCAAGAAAGTCA-T-----AAGA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e micMur3.chr18 56930945 446 + 57149010 I e saiBol1.JH378156 16345326 0 + 16356641 C e cebCap1.NW_016107870v1 1219119 1 + 1231380 I e otoGar3.GL873542 22918040 634 + 22939663 I a score=13923.000000 s hg38.chr20_KI270870v1_alt 176175 1 + 183433 a s panTro5.chr20 66511594 1 + 66533130 a i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178807 1 + 62195757 a i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565060 1 - 578057 a i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087022 1 - 110113093 a i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826550 1 - 92844088 a i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492219 1 + 96509753 a i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962187 1 - 16982598 a i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764133 1 - 3785965 a i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354117 1 - 90373283 a i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154891 1 - 179258 a i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624403 1 - 5823884 A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182509 1 + 159171411 a i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345326 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2745414 1 + 11732439 a i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22918674 1 + 22939663 a i otoGar3.GL873542 I 634 C 0 s mm10.chr2 181851314 1 + 182113224 A i mm10.chr2 C 0 C 0 s dasNov3.JH569290 338792 1 - 397369 A i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e canFam3.chr24 47666189 0 + 47698779 C e micMur3.chr18 56930945 446 + 57149010 I e cebCap1.NW_016107870v1 1219119 1 + 1231380 I a score=680943.000000 s hg38.chr20_KI270870v1_alt 176176 72 + 183433 tccccacactg----tctatgtggttg-----------------------tttcctcttgctatcctata------------------------ac-tagtttctctataata-tatagtt-tctg s panTro5.chr20 66511595 72 + 66533130 tccccacactg----tctatgtggttg-----------------------tttcctcttgctatcctata------------------------ac-tagtttctctataata-tatagtt-tctg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178808 72 + 62195757 tccccacactg----tctatgtggttg-----------------------tttcctcttgctatcctata------------------------ac-tagtttctctataata-tatagtt-tctg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565061 72 - 578057 ttcccacattg----tctatgtggttg-----------------------tttcctcttgctatcctata------------------------ac-tggtttctctataata-tatagtt-tctg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087023 72 - 110113093 tccccacatcg----tctacgtggttg-----------------------tctcctcttgttatcctgta------------------------ac-tagtttctctgtaata-tataatt-tctg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826551 72 - 92844088 tcctcacattc----tctatgtgattg-----------------------tttcctcttgctatcctata------------------------ac-tagtttctctataata-tataatt-tctg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492220 72 + 96509753 tcctcacattc----tctatgtgattg-----------------------tttcctcttgctatcctata------------------------ac-tagtttctctataata-tataatt-tctg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962188 72 - 16982598 tcctcacattc----tctatgtgattg-----------------------tttcctcttgctatcctata------------------------ac-tagtttctctataata-tataatt-tctg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764134 72 - 3785965 tcctcacattc----tctatgtgattg-----------------------tttcctcttgctctcctata------------------------ac-tagtttctctataata-tatagtt-tctg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354118 72 - 90373283 tcctcacattc----tctatgtgattg-----------------------tttcctcttgctatcctata------------------------ac-tagtttctctataata-tataatt-tctg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154892 72 - 179258 tgctcacattc----tctatgtgattg-----------------------tttcctcttgctatcctata------------------------ac-tagtttctctataata-tatgatt-tctg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624404 73 - 5823884 CCCTCACACTC----TCTATGtgattg-----------------------tttcctcttgcaatcctata------------------------ac-cagtttctctataatattataatt-tctg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182510 72 + 159171411 tccccacattc----tttgtgtggttg-----------------------tttcctcttgctatcctata------------------------ac-tagtttctctttaata-tatattt-tcta i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345327 72 + 16356641 tccccacattc----tctgtgtggtgg-----------------------tttcctcttgctatgctata------------------------ac-tagtttgtctttaata-tctattt-ccta i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219120 72 + 1231380 tccccacattc----tctgtgtggttg-----------------------tttcctcttgctatcctgta------------------------ac-tagtttgtctttaata-tctattt-ccta i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2745415 72 + 11732439 tccccgcattc----tctgtgtggttg-----------------------ttttctcttgctatcctcta------------------------ac-tagtttgtctttaata-tatattt-ccta i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22918675 55 + 22939663 cccCCTTATTC----TTGATCTGATTG-----------------------TTCCTTCTTGTTACTCTTTC------------------------AG-TAGTTGCCTG------------------- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181851315 67 + 182113224 -TCTTATCTTC----ATTACCTTTTTA-----------------------TGTTTTCTTGTAGTCCTTTA------------------------AC-TGACTTATC----ATT-TGTGTTT-CTTA i mm10.chr2 C 0 C 0 s canFam3.chr24 47666189 57 + 47698779 -CCTc----------------tgattg-----------------------tctcttctt---atcctttg------------------------acttcttttctttaacata-cgcattt-cttg i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 338793 124 - 397369 TCCCCACATTCCACTCTTATCTGATTGTTGTCCTTTAACTTGTTTCTCTATTTCATCCTTCTCTCACATACATACACATAGACACACACAAGATGC-CATTCCCTCTATTGGA-TATATTTCTCTG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e micMur3.chr18 56930945 446 + 57149010 I a score=3613343.000000 s hg38.chr20_KI270870v1_alt 176248 256 + 183433 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggtt-agcatctttgcaggaatattcataaggtagatgtacttcatggcacatcacattaggggtc-cgta-tgtcaagatatttcattttATTGTAAGCATTTCTATGTATTTTTATAGTATGTATAGGAATGA------TTAAATATGAGCTAAATAGTAGCC----AATTCTTTTGAATATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACAGGTCCT s panTro5.chr20 66511667 257 + 66533130 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggttaagcatcttggcaggaatattcataaggtagatgtacttcatggcacgtcacattaggggtc-cata-tgtcaagatatttcattttATTGTAAGCATTTCTATGTATTTTTATAGTATGTATAGGAATGA------TTAAATATGAGCTAAATAGTAGCC----AATTCTTTTGAATATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACAGGTCCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62178880 257 + 62195757 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggttaagcatctttgcaggaatattcataaggtagatgtacttcatggcacgtcacattaggggtc-cata-tgtcaagatatttcattttATTGTAAGCATTTCTATGTATTTTTATAGTATGTATAGGAATGA------TTAAATATGAGCTAAATAGTAGCC----AATTCTTTTGAATATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACAGGTCCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565133 257 - 578057 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggttaagcatctttgcaggaatattcataaggtagatgtacttcatggcacgtcacattaggggtc-cgta-tgtcaagacatttcattttATTGTAAGCATTTCTATGTATTTTTATAGTATGTATAGGAATGA------TTAAATATGAGCTAAATAGTAGCC----AATTCTTTTGAATATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACAGGTCCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087095 259 - 110113093 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggttaagcatttttgcaggaatattcataagatagatgtacttcatggcacatcacataaggggtc-cgta-tgtcaggatatttcattttATTGTAAGCATATCTATGTATTTTTATAGTATGTATAGGAATGA------TTAAATATGAGCTATTTAGTAGCC----AATTCTTTTGAATATTCTCATTTTGTCTCTAAGAGATAGTTGACTAAGATAACACGCACAGGTCCT i nomLeu3.chr13 C 0 M 100 s rheMac8.chr10 92826623 258 - 92844088 --------taaacagaagtttaggcctag--g-gcctgaatatattcaggttaagcatttttgcaggaatattcataagacagatgtacttcatggcacatcacattaggggtc-cata-tgtcaagatatttcattttATTGTAAGCgtatctatgtatttttgtagtatgtatAGGAATGA------TTAAATATGAGCTATTTAGTAGCC----AAATCTTTTGAATATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACGGGTCCT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492292 257 + 96509753 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggttaagcatttttgcaggaatattcataagacagatgtacttcatggcacatcacattaggggtc-cata-tgtcaagatatttcattttATTGTAAGCgtatctatgtatttttgtagtatgtatAGGAATGA------TTAAATATGAGCTATTTAGTAGCC----AAATCTTTTGAATATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACGGGTCCT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962260 255 - 16982598 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggttaagcatttttgcaggaatattcataagacagatgtacttcatggcacatcacattaggggtc-cata-tgtcaagatatttcattttATTGTAAGCgtatctatgtatttttgtagtatgtatAGGAATGA------TTAAATATGAGCTATTTAGTAGCC----AAATCTTTTGA--ATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACGGGTCCT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764206 257 - 3785965 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggttaagcatttttgcaggaatattcataagacagatgtacttcatggcacatcacattaggggtc-cata-tgtcaagatatttcattttATTGTAAGCgtatctatgtatttttgtagtatgtatAGGAATGA------TTAAATATGAGCTATTTAGTAGCC----AAATCTTTTGAATATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACGGGTCCT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354190 257 - 90373283 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggttaagcatttttgcaggaatattcataagacagatgtacttcatggcacatcacgttaggggtc-cata-tgtcaagatacttcattttATTGTAAGtgtatctatgtatttttgtagtatgtatAGGAATGA------TTAAATATGAGCTATTTAGTAGCC----AAATCTTTTGAATATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACGGGTCCT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 154964 257 - 179258 --------taaacagaag-ttaggcctag--g-gcctgaatatattcaggttaagcatttttgcaggaatcttcataagacagatgtacttcatggcacatcacattaggggtc-cata-tgtcaagatatttcattttATTGTAAGCgtatctatgtatttttgtagtatgtatAGGAATGA------TTAAATATGAGCTATTTAGTAGCC----AAATCTTTTGAATATTCTCATTTTGTCTCT--GGGATAGTTGACTAAGATAACACGCACGGGTCCT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624477 257 - 5823884 --------taaacagaag-ttaggcccag--g-gcctgaatatattcaggttaagcatttttgcaggaatattcataagagagatgtacttcatggcacatcacattaggggtc-catg-tgtcaagatatttcattttATTGTAAGCGTATCTGTGTATTTTTGTAGTATGTATAGGAATGA------TTAAATATGAGCTATTTAGTAGCC----AAATCTTTTGAATATTCTCCTTTTTTCTCT--GGGATAGTTGACTAAGATAACGCGCACGGGTCCT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182582 263 + 159171411 --------taaacattac-ttaggcctag--g-tcctgaatatattcaggttaagcatttttgcaggcatattcataagATAGATGCATTACATGGCACATCTCATTAGGGGTC-TGTA-TGTCAAAATACTTCATTTTATTGTAAGCATATCTGTGTATTTTTATAGTATGTATAGGAAGGATTATATTTAAATATGAGCTATTTAGTAGCC----AAATATTTTGAATATTCTCATTTTGTTTCT--TGGATAGTTGACTAAGATAACACGCACCGGTCCT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345399 263 + 16356641 --------taaacagaac-ttaggcctag--g-gcctgaatatattcaggttaagcattttagcaggcatattcataagatagatgtatttcctggcacatctcattaggggTC-TGTA-TGTTAAAATGCTTCATTTTATTGTAAGCATATCTATGTATTTGTATAGTATGTATAGGGATGATTATATTTAAATGTGAGCTATATAGCAGCC----AAATATTTTGAATATTCTCATTTTGTCTCT--TGGATAGTTGACTAAGATAACACGCACCGGTCCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219192 263 + 1231380 --------taaacagaac-ttaggcctag--g-gcctgaatatattcagatttagcatttttgcaggcatattcataagatagatgtatttcatggcacatctcattaggggTC-TGTA-TGTCAAAATACTTCATTTTATTGTAAGCATATCTATGTATTTTTATAGTATGTATAGGAATGATTATATTTAAATATGAGCTATATAGTAGCC----AAATATTTTGAATATTCTCATTTTGTCTCT--TGGATAGTTGACTAAGATAACACGCACCGGTCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2745487 260 + 11732439 --------taaacagaac-ttaggcctag--g-gcctgaatatattcaggttaagcattttcacaggcatattcataagatagatgcatttcatggcacatctcattaggggTC-TGTA-TGTCAAAATACTTCATTTTATTGTAAGCATATCTGTGTATTTTTATACTA-ATATAGGAATGATTATATTTAAATATGAACTATTTAGTAGCC----AAATATTTTGAATATTCT--TTTTGTCTCT--TGGATAGTTGACTAAGATAACACGCACCGGTCCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56931391 256 + 57149010 --------taaacagaag-ttaggtctag--g-gcttgaacatattcaggctaagcatttttgcaagaatatgcataatttaggtgtacttcatggcacatcacattaggggtc-catattgtcaggttatttcattttATCGTA------TCTATGTATTTT--TAGAATATATAGGGATGATTATATTTAAATATAAGCTATCTAGTAGTC----ACATCTTTTGAATATTATCATTTTGTCTTT--GGGATAGTTGACTAAGATAACGCGCACAGGTCCT i micMur3.chr18 I 446 C 0 s otoGar3.GL873542 22918730 256 + 22939663 --------TAAATGGAAG-TTAAGTCTAG--G-GCTTGGACATATTCAGGCTAAGCATTTTTATCAGAATACTCATAACAGAGGTATACATCATGGCACATCATATCAGTGATC-TATGTTGTCAGATGATTTCATTTTATTGTA------GTTATGTATTTT--TAGAATATGTAGGAATAATTGTATTTAAATATAAGCTATCTAATAGCC----AAATCTTTTGAATATTTTCATTCTGTCTTC--GGGATAGTTGACTAAGATAACGCGCACAGGCCCT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181851382 230 + 182113224 --------TAAACAGAAG-TTAGGTCAAG--GAGTTTGAGTATGTTCATGCTTAGCATTTTCATAAGAATATTTATGTTGTTAGT-----------CGTCTCACATTAGGTGTA-TATA--AACAGGCTGTTTCATATT------------------TAGATTTGC----TATATAAAAATGATTACACTTAAATATAAGTTGTCCAGCGACC----AAATCCTTTGGATATTTTTGTTTTGTCTTT--GAGATAGTTGACCAAGATAACACGCACAGGTCCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47666246 251 + 47698779 --------taaacaaa---ttaggtctggatg-ctttgagcatattcaggcaaaatgtacttgcaataatattaatacgttatgtgtacttcatgtcacatcacatgtggggccacttt-tgtcaggttatttcata-----attagcgTATCTGTGTTTTTTTAGTTTGTATGTAGGAATGA------TTAAATATAAAGTA-ACAGTAGCC----AGATC-TTTGAATATTCTCATTTTCTCTCT--GGGGCAGTTGACTAAGATAACACGAACCGGTCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 338917 272 - 397369 TTGTACATCACACCAAag-ttatatctgga-g-acttaaatattttcaggctaaatggttttgcaagaatattgttaagtaatgtcaacctcatgtcacatcacaccagagacc-catattgttggg-----ttatTTAAATATTGGTATATCAGTGTCTTTTTGGATTATGTGTAGGAATGATTATATTTAAATATAAGCTACCTAGTAGTCTTGAATATTTTTTGAATATTCTCATTTTGTCTTT--GGGATAGTTGACTAAGATAACGCGTACTGGTCCT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I a score=270957.000000 s hg38.chr20_KI270870v1_alt 176504 16 + 183433 TCAGCTTGGGAAACCA s panTro5.chr20 66511924 16 + 66533130 TCAGCTTGGGAAACCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179137 16 + 62195757 TCAGCTTGGGAAACCA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565390 16 - 578057 TCAGCTTGGGAAACCA i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92826881 16 - 92844088 TCAGCTTGGGAAACCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492549 16 + 96509753 TCAGCTTGGGAAACCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962515 16 - 16982598 TCAGCTTGGGAAACCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764463 16 - 3785965 TCAGCTTGGGAAACCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354447 16 - 90373283 TCAGCTTGGGAGACCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155221 16 - 179258 TCAGCTTGGGAAACCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624734 16 - 5823884 TCAGCTTGGGAAACCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182845 16 + 159171411 TCAGCTTGGGAAACCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345662 16 + 16356641 TCAGCTTGGGAAACCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219455 16 + 1231380 TCAGCTTGGGAAACCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2745747 16 + 11732439 TCAGCTTGGGAAACCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56931647 16 + 57149010 TCAGCTTGGGAAACCA i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22918986 16 + 22939663 TCAGCTTGGGAAACCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181851612 16 + 182113224 TCTGCTTGGGAGACAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47666497 16 + 47698779 TCTGCTTGGGAAACCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339189 16 - 397369 TCTGCTTGGGAAACCA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e nomLeu3.chr13 110087354 100 - 110113093 M a score=1591902.000000 s hg38.chr20_KI270870v1_alt 176520 91 + 183433 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC s panTro5.chr20 66511940 91 + 66533130 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179153 91 + 62195757 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565406 91 - 578057 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087456 91 - 110113093 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i nomLeu3.chr13 M 100 C 0 s rheMac8.chr10 92826897 91 - 92844088 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492565 91 + 96509753 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962531 91 - 16982598 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764479 91 - 3785965 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354463 91 - 90373283 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155237 91 - 179258 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624750 91 - 5823884 AAAAGATTCTTGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAT---------------------------AC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182861 118 + 159171411 AAAAGATTCTCGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAACCAAGACTTGTCCAGTTGCGTGAGTATACCAGTCGTCTACCAGTCTAGCAGTCTAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345678 118 + 16356641 AGAAGATTCTCGCGGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAAGCAAGATTTGTCCAGTTGCGTGAGTATATCAGTCGTCTACCAGTCTACCAGTCGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219471 110 + 1231380 AAAAGATACTGGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAACCAAGACTTGTCCAGTTGCGTGAGTATACCAGTCGTCTACCAATCT--------AC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2745763 110 + 11732439 AAAAGATTCTCGCTGTTTCTTTTGCTCCTCTGATCCAGCCCTGCAATTCAGAGTCAGGAAAACCAAGACTTGTCCAGTTGCGTGAGTATACCAGTCGTCTACCAGTCT--------AC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56931663 91 + 57149010 AAAAGATTCTGGCTGTTTCTTTTGCTCCTCTGATCCAACCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAATTACGTAAGTAT---------------------------AC i micMur3.chr18 C 0 I 23 s otoGar3.GL873542 22919002 91 + 22939663 AAAAGATTCTGGCTGTTTCTTTTGCACCTCTGATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGACTTGTCCAGTTACGTAAGTAC---------------------------AT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181851628 91 + 182113224 AAAAGATTCTGGCTGTTTCCTTTGCCCCTCTGGTCCAGCCTTGCCGTTCGGAATCAGGACAGTCCAGACTTGTCCAGCTACGTGAGTAT---------------------------GA i mm10.chr2 C 0 C 0 s canFam3.chr24 47666513 91 + 47698779 AAAAGATTCTGGCTGTTTCTTTTGCTCCTCTAATCCAGCCTTGTCACTCAGAGTCTGGAAAATCAAGACTTGTCCAGTTACGTAAGTAC---------------------------AA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339205 91 - 397369 AAAAGATTCTGGCTGTTTCTTTTGCTCCTCTCATCCAGCCCTGCCATTCAGAGTCAGGAAAATCAAGGCTTGTCCAGTTACGTAAGTAC---------------------------AA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I a score=254824.000000 s hg38.chr20_KI270870v1_alt 176611 23 + 183433 CAATCTTTACTTATTTTATCTTT s panTro5.chr20 66512031 23 + 66533130 CAATCTTTACTTATTTTATCTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179244 23 + 62195757 CAATCTTTACTTATTTTATCTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565497 23 - 578057 CAATCTTTACTTATTTTATCTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087547 23 - 110113093 CAATCTTTACTTATGGTATCTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92826988 23 - 92844088 CAGTCTTTACTTATTTTATCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492656 23 + 96509753 CAGTCTTTACTTATTTTATCTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962622 23 - 16982598 CAGTCTTTACTTATTTTATCTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764570 23 - 3785965 CAGTCTTTACTTATTTTATCTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354554 23 - 90373283 CAGTCTTTACTTATTTTATCTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155328 23 - 179258 CAGTCTTTACTTATTTTATCTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624841 23 - 5823884 CAGTCTTTACTTATTTTATCTTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58182979 23 + 159171411 CAGTCTTTACTTACTTTATCTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345796 23 + 16356641 CAATCTTTACTTATTTTATCTTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219581 23 + 1231380 CAGTCTTTACTTATTTTATCTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2745873 23 + 11732439 CAGTCTTTACTTATTTTATCTTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22919093 19 + 22939663 TGAACT----TTATTTCATCTTT i otoGar3.GL873542 C 0 I 357 s mm10.chr2 181851719 7 + 182113224 ---------------ACATCCT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47666604 18 + 47698779 AGACCCTTACTTATCTTT----- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339296 23 - 397369 AGATATGTACTTATTTTGTCTTT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e micMur3.chr18 56931754 23 + 57149010 I a score=173345.000000 s hg38.chr20_KI270870v1_alt 176634 15 + 183433 TAGATCTTTTCTCTC s panTro5.chr20 66512054 15 + 66533130 TAGATCTTTTCTGTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179267 15 + 62195757 TAGATCTTTTCTGTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565520 15 - 578057 TAGATCTTTTCTGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087570 15 - 110113093 TATATCTTTTTCGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827011 15 - 92844088 TAGATCTTTTTCGTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492679 15 + 96509753 TAGATCTTTTTCGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962645 15 - 16982598 TAGATCTTTTTCGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764593 15 - 3785965 TAGATCTTTTTCGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354577 15 - 90373283 TAGATCTTTTTCGTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155351 15 - 179258 TAGATCTTTTTCGTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624864 15 - 5823884 TAGATCTTTTTCGTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183002 15 + 159171411 TAGATCTTTTTCGTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345819 15 + 16356641 TAGATCTTTTTCGTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219604 15 + 1231380 TAGATCTTTTTCATC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2745896 15 + 11732439 TAGATCTTTTTCGTC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181851726 12 + 182113224 ---GTCTTTTATCTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47666622 10 + 47698779 CAGATCTTTT----- i canFam3.chr24 C 0 I 11 s dasNov3.JH569290 339319 15 - 397369 TAGATCTTTTTAATC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e micMur3.chr18 56931754 23 + 57149010 I e otoGar3.GL873542 22919112 357 + 22939663 I a score=22951.000000 s hg38.chr20_KI270870v1_alt 176649 3 + 183433 TGG s panTro5.chr20 66512069 3 + 66533130 TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179282 3 + 62195757 TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565535 3 - 578057 TGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087585 3 - 110113093 TGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827026 3 - 92844088 TGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492694 3 + 96509753 TGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962660 3 - 16982598 TGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764608 3 - 3785965 TGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354592 3 - 90373283 TGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155366 3 - 179258 TGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624879 3 - 5823884 TCG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183017 3 + 159171411 TCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345834 3 + 16356641 TCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219619 3 + 1231380 TCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2745911 3 + 11732439 TCA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22919469 3 + 22939663 TGG i otoGar3.GL873542 I 357 C 0 s mm10.chr2 181851738 3 + 182113224 TGA i mm10.chr2 C 0 C 0 s dasNov3.JH569290 339334 3 - 397369 TCG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e canFam3.chr24 47666632 11 + 47698779 I e micMur3.chr18 56931754 23 + 57149010 I a score=1332803.000000 s hg38.chr20_KI270870v1_alt 176652 112 + 183433 TTAGATTTTAAAAGGAAACAAAATTTACAAC---------AAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAACTGTAAAATTCTACAAGCAATTTCAGGCATTA-TAAAAATTA s panTro5.chr20 66512072 112 + 66533130 TTAGGTTTTAAAAGGAAACAAAATTTACAAC---------GAACCTTTTGATATTAAAAAGCA-CCA--TT----CCCATGCTGAAACTGTAAAATTCTACAAGCAATTTCAGGCATTA-TAAAAATTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179285 112 + 62195757 TTAGATTTTAAAAGGAAACAAAATTTACAAC---------GAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAACTGTAAAATTCTACAAGCAATTTCAGGCATTA-TAAAAATTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565538 112 - 578057 TTAGATTTTAAAAGGAAACAAAATTTACAAT---------GAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAACTGTAAAATTCTACAAGCAATTTCAGGCATTA-TACAAATTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087588 112 - 110113093 TTAGATTTTAAAAGGAAACAAAATTTACAAA---------TAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAACTGTAAAATTCTACAAGCAATTTCAGGCATTA-AAAAAATTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827029 110 - 92844088 TTAGATTTTAAAAGGAAACAAAGCTTCCAAA---------GAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAAC--TAAAATTCTACAAGCAATTTCAGGCATTA-AAAAAGTTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492697 110 + 96509753 TTAGATTTTAAAAGGAAACAAAGCTTACAAA---------GAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAAC--TAAAATTCTACAAGCAATTTCAGGCATTA-AAAAAGTTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962663 110 - 16982598 TTAGATTTTAAAAGGAAACAAAGCTTACAAA---------GAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAAC--TAAAATTCTACAAGCAATTTCAGGCATTA-AAAAAGTTA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764611 110 - 3785965 TTAGATTTTAAAAGGAAACAAAGCTTACAAA---------GAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAAC--TAAAATTCTACAAGCAATTTCAGGCATTA-AAAAAGTTA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354595 110 - 90373283 TTAGATTTTAAAAGGAAACAAAGCTTACAAA---------GAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCCTGCTGAAAC--TGAAATTCTACAAGCAATTTCAGGCATTA-AAAAAATTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155369 110 - 179258 TTAGATTTTAAAAGGAAACAAAGCTTACAAA---------GAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAAC--TAAAATTCTACAAGCAATTTCAGGCATTA-AAAAAGTTA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624882 110 - 5823884 TTAGATTTTAAAAGGCAACAAAGCTTACAAA---------GAACCTTTTGATATTAAAAAGCA-CCA--CT----CCCATGCTGAAAC--TAAAATTCTACAAGCAATTTCAGGCGTTA-AAAAAATTA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183020 112 + 159171411 TTATATTTTAAAAGGAAACAAAATTTTCAAA---------GAACCTTCTGATAATAAACAGCA-CTA--CT----CCCATGCTGAAACTTTAAAATTCTACAAGCAATTTCAGGCATTT-AAAAAATTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345837 112 + 16356641 TTAGATTTTAAAAGGAAACAAAATTTACAAA---------GAACCTTATGATAATAAACAGCA-CCA--CC----CCCATACTGAAACTTTAAAATTCTACAAGCAATTTCAGGCATTT-GAAAAATTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219622 112 + 1231380 TTAGATTTTAAAAGGAAACAAAATTTACAAA---------GAACCTTCTGATAGTAAACAGCA-CCA--CT----CCCATGCTGAAACTTTAAAATTCTACAAGCAATTTCAGGCATTT-AAAAAATTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2745914 112 + 11732439 TTAGATTTTAAAAGGAAACAAAATTTACAAA---------GAACCTTCTGATAAGAAACAGCA-CCA--CT----CCCATGCTGAAACTTTAAAATTCTACAAGCAATGTCAGGCATTT-AAAAAATTA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56931777 112 + 57149010 TTAGAGTTTTAAAGTAAACAAAATTTACAAG---------GAACCTTTTGATATGAAAGAGCA-TTT--TC----CCTCCACTGAAACTTTAAAATTCTACACGTGATTTCAGGCATTT-TAAAAATTA i micMur3.chr18 I 23 I 236 s otoGar3.GL873542 22919472 114 + 22939663 TTAAAATTTTAAAGTAAACAAAATTTACAAG---------GAACTTTTTGATATTAAAGAACATTTT--TC----CTTCTACTGAAACTTTAAGATTCTATAAGCGATTTCAAGCATTTAAAAAAATTA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181851741 111 + 182113224 TTAAAGTTAGAATAGAAACAGAATGTACAAA---------AAAAATTTTGATATTAAAGAGTG-CTAATCT----CCTCTGTTGAATTC-TCAAATTATACAGGATGTTTTAGATATTT-TTAAAGT-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47666643 36 + 47698779 TTAGATTTGAAGAG--------------AAT---------GAA-------AAATTATAAGGAG-CTG-------------------------------------------------------------- i canFam3.chr24 I 11 C 0 s dasNov3.JH569290 339337 124 - 397369 TTAGAATTGGAAGGGAAACAACATTTACAAATTTACAAAGGAACTGTTTACTATTAATGAATG-TTT--CCCTTGCCCCCGCTGAACCT-TAAGCTTCTACAAGGGAGTTTGGGCATTT-TCAAATTTA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I a score=28926.000000 s hg38.chr20_KI270870v1_alt 176764 2 + 183433 TA s panTro5.chr20 66512184 2 + 66533130 TA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179397 2 + 62195757 TA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565650 2 - 578057 TA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087700 2 - 110113093 TA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827139 2 - 92844088 TA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492807 2 + 96509753 TA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962773 2 - 16982598 TA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764721 2 - 3785965 TA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354705 2 - 90373283 TA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155479 2 - 179258 TA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624992 2 - 5823884 TA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183132 2 + 159171411 TA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345949 2 + 16356641 TA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219734 2 + 1231380 TA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746026 2 + 11732439 TA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22919586 2 + 22939663 CA i otoGar3.GL873542 C 0 I 1921 s canFam3.chr24 47666679 2 + 47698779 TA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339461 2 - 397369 TA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e mm10.chr2 181851852 0 + 182113224 C e micMur3.chr18 56931889 236 + 57149010 I a score=593544.000000 s hg38.chr20_KI270870v1_alt 176766 46 + 183433 ATCTATTTTTAACCTATTTCAGGTAATTTTAGCCGTCTTTTAAATC s panTro5.chr20 66512186 46 + 66533130 ATCTATTTTTAACCTATTTCAGGTTATTTTAGCCGTCTTTTAAATC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179399 46 + 62195757 ATCTATTTTTAACCTATTTCAGGTTATTTTAGCCGTCTTTTAAATC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565652 46 - 578057 ATCTATTTTTAACCTATTTCAGGTTATTTTAGCCGTCTTTTAAATC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087702 46 - 110113093 ATCTATTTTTAACCCATTTCAGGTTATTTTAGCCGTCTTTTAAATC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827141 46 - 92844088 ATCTATTTTTAGCCTATTTCAGGTTATTTTAGCTGTCTTTTAAATC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492809 46 + 96509753 ATCTATTTTTAGCCTATTTCAGGTTATTTTAGCTGTCTTTTAAATC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962775 46 - 16982598 ATCTATTTTTAGCCTATTTCAGGTTATTTTAGCTGTCTTTTAAATC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764723 46 - 3785965 ATCTATTTTTAGCCTATTTCAGATTATTTTAGCTGTCTTTTAAATC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354707 46 - 90373283 ATCTATTTTTAGCCTATTTCAGGTTATTTTAGCCGTCTTTTAAATC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155481 46 - 179258 ATCTATTTTTAGCCTATTTCAGGTTATTTTAGCTGTCTTTTAAATC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5624994 46 - 5823884 ATCTATTTTTAGCCTATTTCAGGTTATTTTAGCCGTCTTTTAAATC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183134 46 + 159171411 ATCTATTTTTAACCTATTTCAGGTTATTTTAGCCATCTTTTAAATC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345951 46 + 16356641 ATCTATTTTTAGCCTATTTCAGGTTATTTTAGCTGTCTTTTAAATC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219736 46 + 1231380 ATCTATTTTTAGCCTATTTCAGGTTGTTTTAGCCATCTTTGAAATA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746028 46 + 11732439 ATCTATTTTTAGCCTATTTCAGGTTATTTTAGCTATCTTTTAAATC i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181851852 45 + 182113224 ATCTCTTTTTAGTTCATCTT-GGTGATCTTAATCTTCTTTTAAATC i mm10.chr2 C 0 C 0 s canFam3.chr24 47666681 43 + 47698779 ATGGGTTTTCAGCCTGTTTTAGGTTATTTTTGC---CTTTTAAATC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339463 46 - 397369 ATCTATTTTTTATTTGTCTTAGGTTATTTTGGACTTCTTTTAAGTC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e micMur3.chr18 56931889 236 + 57149010 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=1163724.000000 s hg38.chr20_KI270870v1_alt 176812 98 + 183433 TACAAAGAGCTGTTGCCGGTCACACCATTGAAAGCCGAGGACGCACATAAAAGGGAGCTCATTTTGCCATGTGGGAGACTTAGCCTATTTGCCGCCTC s panTro5.chr20 66512232 98 + 66533130 TACAAAGAGCTGTTGCCAGTCACACCATTGAAAGCCGAGGACGCACATAAAAGGGAGCTCATTTTGCCATATGGGAGACTTAGCCTATTTGCCGCCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179445 98 + 62195757 TACAAAGAGCTGTTGCCAGTCACTCCATTGAAAGCCGAGGACGCACATAAAAGGGAGCTCATTTTGCCATGTGGGAGACTTAGCCTATTTGCCGCCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565698 97 - 578057 TACAAAGAGCTGTTGCCGGTCACACCATTGAAAGCCGAGGACGCACATAAAAGGGAGCTCA-TTTGCCATGTGGGAGACTTAGCCTATTTGCCGCCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087748 98 - 110113093 TACAAAGAGCTGTTGCTGGTCACGCCATTGAAAGCTGAGGACGCACATAAAAGGGAGCTCGTTTTGCCATGTGGGAGACTTAGCCTATTTGCCACCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827187 98 - 92844088 TACAAAGAGCTGTTGCTGGTCACGCCACTGAAAGCGTAGGACGCACATAAAAGGGAGCTCATTTTGCCACGTGGGAGACTGAGCCTCTTTGCCGCTTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492855 98 + 96509753 TACAAAGAGCTGTTGCTGGTCACGCCACTGAAAGCGTAGGACGCACATAAAAGGGAGCTCATTTTGCCACGTGGGAGACTGAGCCTCTTTGCCGCTTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962821 98 - 16982598 TACAAAGAGCTGTTGCTGGTCACGCCACTGAAAGCGTAGGACGCACATAACAGGGAGCTCATTTTGCCACGTGGGAGACTGAGCCTCTTTGCCGCTTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764769 98 - 3785965 TACAAAGAGCTGTTACTGGTCACGCCACTGAAAGCGTAGGACGCACATAAAAGGGAGCTCATTTTGCCATGTGGGAGACTGAGCCTCTTTGCCGCTTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354753 96 - 90373283 TACAAAGAGCTGTTGCTGGTCACGCCACTGAAAGCGTAGGACGCACATAAAAGGGAGCTCATTTTGCCACGTGGGAGACTGAGCCTC--TGCCGCTTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155527 98 - 179258 TACAAAGAGCTGTTGCTGGTCACGCCACTGAAAGCGTAGGACGCACATAAAAGGGAGCTCATTTTGCCGCGTGGGAGACTGAGCCTCTTTGCCGCTTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625040 98 - 5823884 TACAAAGAGCTGTTGCTGGTCACGCCGTTGAAAGCTGAGGACGCACATAAAAGGGAGCTCATTTTGCCACATGGGAGACTGAGCCTCTTTGCCACTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183180 98 + 159171411 TACAAAGAGCTGTTGTTGGTCACGCCACTGAAAGCAAAGGACGCACATAAAAGGGAGTTCATTTTGCCACATAGGGGACTTAGCGTATTTGCCACCTC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16345997 94 + 16356641 TACAAAGAGC---TGTTGGTCGTGCCATTGGAAGCAAAGGGCACGCATACAAGGGAGCTCATTTTGCCACATA-GGGACTTAGGCTATTGGCCACCTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219782 98 + 1231380 TACAAAGAGCTGTTGTTGGTCACGCCATTGAAAGCAAAGGACACACATAAAAGGGAGCTCATTTTGCCACATAGGGGACTTAGCCTATTTGCCACCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746074 97 + 11732439 TACAAAGAGCTGTTGTTGGTCACGCCATTGAAAGCAAAGGAAGCACATAAAAGGGAGCTCATTTTGCCACACG-GGGACTTAGCCTATTTGCCACCTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56932125 98 + 57149010 TACAAAGAGCTGTTGCTAGTCATGCCATTGAAAGCAGAGGACCCACACAAAAGGGAGCTAATTCTGTTGTGTGGAGGACTTAGACTGTTTGCCTCCTC i micMur3.chr18 I 236 I 19 s mm10.chr2 181851897 91 + 182113224 TATAAAATGTTGTTGCTAGTCATGCTTTTGAGAGTAGCAGATTCACACACAAAGGAGATTATTTTG-------GGAATCATAGGCAGTTTGCCTTGCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47666724 72 + 47698779 TGC-AGGAATTATTGCTGGTCATGCCATTGAAAGCAGAAGACTCCCATGAGAGGGAGTTAATTCTGCTGTGTG------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339509 95 - 397369 TACAGAGAGCTG-TGCTGGTCATGCCATGGAAAGCAGAGGACACACATA--GGGGAGATAATTTTGCTATATGGGGACATTAGGCTACTCACCTCTCC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=227967.000000 s hg38.chr20_KI270870v1_alt 176910 32 + 183433 CACTGGGAGGGGCTTA-CAGAAAGAG-------C----------------CATCAG s panTro5.chr20 66512330 32 + 66533130 CACTGGGAGGGGCTTA-CAGAGAGAG-------C----------------CATCAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179543 32 + 62195757 CACTGGGAGGGGCTTA-CAGAGAGAG-------C----------------CATCAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565795 32 - 578057 CACTGGGAGGGGCTTA-CAGAGAGAG-------C----------------CATCAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087846 32 - 110113093 CACTGGGAGGGGCTTA-CAGAGAGAG-------C----------------CATCAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827285 31 - 92844088 CGCTGGGTGAGGTCTT-CAGAGAGAG-------C----------------CATCG- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492953 31 + 96509753 CGCTGGGTGAGGTCTT-CAGAGAGAG-------C----------------CATCG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962919 31 - 16982598 CACTGGGTGAGGTCTT-CAGAGAGAG-------C----------------CATCG- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764867 31 - 3785965 CGCTGGGTGAGGTCTT-CAGAGAGAG-------C----------------CATCG- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354849 31 - 90373283 CGCTGGGAGAGGTCTT-CAGAGAGAG-------C----------------CACTG- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155625 31 - 179258 CGCTGGGTGAGGTCTT-CAGAGAGAG-------C----------------CATCG- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625138 32 - 5823884 CGCTGGGAGAGGTCTTACAGTGAGAG-------C----------------CATCG- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183278 33 + 159171411 CACTAGGAGAGGTCTTACAGAGAGAG-------C----------------CATCAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346091 33 + 16356641 CACTAGGAGAGGCCTTACAGAGAGAG-------C----------------CATCAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219880 33 + 1231380 CACTAGGAGAGGTTCTACAGAGAGAG-------C----------------CATCAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746171 33 + 11732439 CACTAAGAGAGGTCTTACAGAGAGAG-------C----------------CGTCAG i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181851988 31 + 182113224 TGCTGGGAATTGTTACCCGAATATAG-------C----------------CCTC-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47666796 34 + 47698779 ------GGGAGGTGTCACAGAGAGAGTGTGGTTC----------------CAGCAC i canFam3.chr24 C 0 I 7 s dasNov3.JH569290 339604 46 - 397369 CACTGGGAGGGGCCTTATGGAGAGAA-------CGTGTTCTGAGCTGGAGCAG--- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e micMur3.chr18 56932223 19 + 57149010 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=444487.000000 s hg38.chr20_KI270870v1_alt 176942 47 + 183433 CCAGAGGGCTCCTAC--AGAGTCATGGGGCT-TCTGCTCCCCAGGGC-GCC s panTro5.chr20 66512362 47 + 66533130 CCAGAGGGCTCCTAC--AGAGTCATGGGGCT-TCTGCTCCCCAGGGC-GCC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179575 47 + 62195757 CCAGAGGGCTCCTAC--AGAGTCATGGGGCT-TCTGCTCCCCAGGGC-GCC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565827 47 - 578057 CCAGAGGGCTCCTAC--AGAGTCATGGGGCT-TCTGCTCCCCAGGGC-GCC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087878 47 - 110113093 CCAGAGGGCTCCTAC--AGAGTCACGGGGCT-TCTGCTCCCCAGGGC-GCC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827316 45 - 92844088 --AGAGGGCTCCTGC--AGAGTCATGGGGCA-TCTGTTCCCCAGGGC-ACC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96492984 45 + 96509753 --AGAGGGCTCCTGC--AGAGTCATGGGGCA-TCTGTTCCCCAGGGC-ACC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962950 45 - 16982598 --AGAGGGCTCCTGC--AGAGTCATGGGGCA-TCTGTTCCCCAGGGC-ACC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764898 45 - 3785965 --AGAGGGCTCCTGC--AGAGTCATGGGGCA-TCTGTTCCCCAGGGC-ACC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354880 45 - 90373283 --AGAGGGTTCCTGC--AGAGTCATGGGGCA-TCTGTTCCCCAGCAC-ACC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155656 45 - 179258 --AGAGGGCTCCTGC--AGAGTCATGGGGCA-TCTGTTCCCCAGGGC-ACC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625170 47 - 5823884 --AGAGGGCTCCTACAGAGAGTCCTGGGGCA-TCTGTTCCCCAGGAC-ACC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183311 48 + 159171411 CCAAAGAGCTCCTAC--AGAGTCATGGGGCT-TTTGTTCCCCAGGGCTACT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346124 48 + 16356641 CCAGAGAGCTCCTAC--AGAGTCATGGGGCT-TCTCCTCCCCAGGGCTGCT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219913 47 + 1231380 CCAGAGAGTTCCTAC--AGAGTCA-GGGGCT-TCTGCTCCCCAGGGCTGCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746204 48 + 11732439 CCAAAGAGCTCCTAC--AGAGTCGTGGGGCT-TCTGCTCCCCAGGGCTGCT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56932242 48 + 57149010 CCAAAGGGCTCCTAC--AGAGTCATGGGACTATCTGCTCCCTAGGGT-GCC i micMur3.chr18 I 19 I 24 s mm10.chr2 181852019 14 + 182113224 ------------------------------------TTTCTCACAGT-ACC i mm10.chr2 C 0 C 0 s canFam3.chr24 47666837 40 + 47698779 CCAGAGGACTC------AGAGTCATGGGAAC-CCTTTTCTCCTTGGG---- i canFam3.chr24 I 7 C 0 s dasNov3.JH569290 339650 34 - 397369 GCCACGGGCTCCTGC--AGAACCA--------TCTGCTCTTTAG------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=304949.000000 s hg38.chr20_KI270870v1_alt 176989 37 + 183433 AAGCGCCTGCTGCCTC-ATGGGTAGACAAGGT-TAGAGA s panTro5.chr20 66512409 37 + 66533130 AAGCGCCTGCTGCCTC-ATGGGTAGACAAGGG-TAGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179622 37 + 62195757 AAGCGCCTGCTGCCTC-ATGGGTAGACAAGGG-TAGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565874 37 - 578057 AAGCGCCTGCTGCCTC-ATGGGTAGACAAGGG-TAGAGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087925 37 - 110113093 AAGCGCCTGCTGCCTC-ACGGGTAGACAAGGG-CAGAGA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827361 37 - 92844088 AAGCGCCTGCTGCCTC-ATGAGTAGACGAGGG-CAGAGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493029 37 + 96509753 AAGCGCCTGCTGCCTC-ATGAGTAGACGAGGG-CAGAGA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16962995 37 - 16982598 AAGCGCCTGCTGCCTC-ATGAGTAGACGAGGG-CAGAGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764943 37 - 3785965 AAGCGCCTGCTGCCTC-ATGAGTAGACGAGGG-CAGAGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354925 37 - 90373283 AGGCGCCTGCTGCCTC-CTGGGTAGACGAGGG-CAGAGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155701 37 - 179258 AAGCGCCTGCTGCCTC-ATGAGTAGACGAGGG-CAGAGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625217 37 - 5823884 AAGCGCCTGCTGCCTC-ATGGGTAGACAAGGG-TAGAGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183359 38 + 159171411 TAGCGCCTGCTGCCTT-GTGGGTAGATGAAGGGTAGAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346172 38 + 16356641 TAGCGCCTGCTGCCTC-GTGGGTAGATGAAGGGTAGAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219960 33 + 1231380 TAGCGCCTGCTGCCTC-GTGGGTAGATGAAGG-----GA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746252 38 + 11732439 TAGCGCCTGCCGCCTC-GTGGGTAGATGAAGGGCAAAGA i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181852033 35 + 182113224 ---TGTCTCATGCCACTTTAAGAAAATATAGG-TGAGGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47666877 15 + 47698779 --------GCTGCCTT-GTGGGGT--------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339684 17 - 397369 -------TGGTGTCAC-GTGGG-AGA------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e micMur3.chr18 56932290 24 + 57149010 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=345572.000000 s hg38.chr20_KI270870v1_alt 177026 34 + 183433 ACACATTCCAGCTAATCTGCTGGGGTGTGGATAG s panTro5.chr20 66512446 34 + 66533130 ACACATTCCAGCTAATCTGCTGGGGTGTGGATAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179659 34 + 62195757 ACACATTCCAGCTGATCTGCTGGGGTGTGGATAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565911 34 - 578057 ACACATTCCAGCTAATCTGCTGGGGTGTGGATAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110087962 33 - 110113093 ACACATTCCAGCTAATCTGCT-GGGTGTGGATAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827398 32 - 92844088 ACACATTCCAGCTAATCTGCTGGG--GTGGATAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493066 32 + 96509753 ACACATTCCAGCTAATCTGCTGGG--GTGGATAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963032 32 - 16982598 ACACATTCCAGCTAATCTGCTGGG--GTGGATAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3764980 32 - 3785965 ACACATTCCAGCTAATCTGCTGGG--GTGGATAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354962 32 - 90373283 ACACATTCCAGCGGATCTGCTGGG--GTGCATGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155738 32 - 179258 ACACATTCCAGCTAATCTGCTGGG--GTGGATAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625254 32 - 5823884 ACACATTCCAGCTAATCTGCTTGG--GTGGATGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183397 34 + 159171411 ACACATTGCAGCTAATCTACTGGAGTGTGGATAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346210 34 + 16356641 ACACATTGCAGCTAATCTGCTAGGATGTGGATAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1219993 34 + 1231380 ACACATTGCAGCTAATCTACTAGAGTGTGGATAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746290 34 + 11732439 ACACATTGCAGCTGATCTACTGGGGTGTGGATAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56932314 34 + 57149010 ACACATTCCAGCCAATCTACTGGTGTGTAGCTGG i micMur3.chr18 I 24 C 0 s mm10.chr2 181852068 22 + 182113224 ---------ACCTGTTCTGCTGTGTGATTGA--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47666892 32 + 47698779 ACATGTTTCAGCGGGTCTGCAGTA-TGTGG-TAG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339701 34 - 397369 CCGCCTTCTGACGAACCTGCTGGAGTTTGGACAG i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1920662 6207 - 2029793 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=166418.000000 s hg38.chr20_KI270870v1_alt 177060 12 + 183433 -------GAGACTTTCCGT s panTro5.chr20 66512480 12 + 66533130 -------GAGACTTTCCGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179693 12 + 62195757 -------GAGACTTTCCGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565945 12 - 578057 -------GAGACTTTCCGT i gorGor5.CYUI01015848v1 C 0 I 1 s nomLeu3.chr13 110087995 12 - 110113093 -------GAGACCTTCCGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827430 12 - 92844088 -------GAGACTTTCCGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493098 12 + 96509753 -------GAGACTTTCCGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963064 12 - 16982598 -------GAGACTTTCCGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765012 12 - 3785965 -------GAGACTTTCCGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90354994 12 - 90373283 -------GAGACTTTCCGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155770 12 - 179258 -------GAGACTTTCCGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625286 12 - 5823884 -------GAGACTTTCCGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183431 12 + 159171411 -------GAGACTTTCTGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346244 12 + 16356641 -------GAGACTTTCTGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220027 12 + 1231380 -------GAGACTTTCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746324 12 + 11732439 -------GAGACTTTCTGT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56932348 12 + 57149010 -------GAGACTTTCCAC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1926869 12 - 2029793 -------GAGACTTTCCAC i proCoq1.NW_012150197v1 I 6207 C 0 s mm10.chr2 181852090 10 + 182113224 -------GAAATTTTGT-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47666924 12 + 47698779 -------GAGGCTTACCCT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339735 19 - 397369 GAGACCCCAGGCTCTCCTT i dasNov3.JH569290 C 0 I 12 e otoGar3.GL873542 22919588 1921 + 22939663 I a score=879060.000000 s hg38.chr20_KI270870v1_alt 177072 79 + 183433 GGAACCTTACACA-GCCGAGCCTTTGTGT--TTCACTATTTCAGGATGCAAACTGAGCAAGGAACTGATACCAG--GGCCAGCA s panTro5.chr20 66512492 79 + 66533130 GGAACCTTACACA-GCCGAGCCTTTGTGT--TTCACTATTTCAGGATGCAAACTGAGCAAGGAACTGATACCAG--GGCCAGCA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179705 79 + 62195757 GGAACCTTACACA-GCCGAGCCTTTGTGT--TTCACTATTTCAGGATGCAAACTGAGCAAGGAACTGATACCAG--GGCCAGCA i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110088007 79 - 110113093 GGAAGCTTACACA-GCCGAGCCTTTGTGT--TTCACTATGTCAGAATGCAAACTGAGCAAGGAACTAACACCAG--GGCCAGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827442 79 - 92844088 GGAACCTTACACA-GCCGAGCCTTTGTGT--TTCACTAGTTGAGGATGCAAACTGAGCAAGGAACTGATACCAG--GGCCAGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493110 79 + 96509753 GGAACCTTACACA-GCCGAGCCTTTGTGT--TTCACTAGTTGAGGATGCAAACTGAGCAAGGAACTGATACCAG--GGCCAGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963076 79 - 16982598 GGAACCTTACACA-GCCGAGCCTTTGTGT--TTCACTAGTTCAGGATGCAAACTGAGCAAGGAACTGATACCAG--GGCCAGCA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765024 79 - 3785965 GGAACCTTACACA-GCTGAGCCTTTGTGT--TTCACTAGTTCAGGATGCAAACTGAGCAAGGAACTGATACCAG--GGCCAGCA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355006 79 - 90373283 GGAACCTTACCCA-GCCGAGCCTTTGTGT--TTCACAAGTTCAGGATGCAGACTGAGCAAGGAACTGATACCAG--GGCCAGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155782 79 - 179258 GGAACCTCACACA-GCCGAGCCTTTGTGT--TTCACTAGTTCAGGATGCAAACTGAGCAAGGAACTGATACCAG--GGCCAGCA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625298 79 - 5823884 GGAACCTTACACA-GCCGAGCCTTTGTGT--TTCACTATTTCAGGATGCAAACTGAGCAAGGAACTGATGCCAG--GGCCAGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183443 79 + 159171411 AGAAGCTTCCACA-GGCAAGCCTTTGTAT--TTTACTAGTTTAGGATGCAGACTGAGCAAGGAACTGATACCAG--GGCCAGCA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346256 78 + 16356641 GGAAGCTTCCACA-GCCAAGCCTTTGTGT--TTCACTAGTTCAGGGTGCAGACTGAGCAAGGAATTGATGCCGG--GG-CAGCA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220039 79 + 1231380 GGAAGCTTCCACA-GCCAAGCCTTTGTGT--TTCACTAGTTCAGGATGCAGACTGAGCAAGGAACCGATACCAG--GGCCAGCA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746336 59 + 11732439 GGAAGCTTCCACA-GCCAAGCCTTTGTGT----------------------ACTGAGCAAGGAACTGATACCAG--GGCCAGCA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56932360 79 + 57149010 GGAGCCTTACACA-GCTGAGCCTCTGTGT--TTCATTGTTTCAGGATGCAAACTGAGCAAGGGTCCAACACCAG--GGCCAGCA i micMur3.chr18 C 0 I 1924 s proCoq1.NW_012150197v1 1926881 79 - 2029793 GGAGCCTTAGACA-GCTGAGCCTTTGCGT--TTCGTTGTTTCAGGATGCAGACTGAGCAAGGGGCCAACACCAG--GGCCAGCA i proCoq1.NW_012150197v1 C 0 I 176 s mm10.chr2 181852100 83 + 182113224 GTAGCCTCACATACTTTGAACCATTGTGTTGTTTACT-CTCTAAGATGCAGGCTGTACATGGAGCTAATGTAGGCTGACCTTCA i mm10.chr2 C 0 C 0 s canFam3.chr24 47666936 77 + 47698779 GGAGCCTTACCTG-GCTAGGCCG-TGCCT--TCAACTCCTTCCAGATGTGGGCCCAG-AAAGAGCGAAGAGCAG--GGCCAGCA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339766 58 - 397369 GGGGACTTACATG-GCCCACCCTTTACAT--TTCATTC----------CCACCTGAGC------CTCATCACAG--AGC----- i dasNov3.JH569290 I 12 C 0 e gorGor5.CYUI01015848v1 565957 1 - 578057 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=475017.000000 s hg38.chr20_KI270870v1_alt 177151 82 + 183433 CGACAGCAAAACCTCCTAATGT---TTTAAAATTTAAAC---GG--CTCACACAGAAATGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA s panTro5.chr20 66512571 79 + 66533130 CGACAGCAAAA---CCTAATGT---TTTAAAATTTAAAC---GG--CTCACACAGAAATGAGAGTTCCAATTGAT-----TTT----A----TTTAAAACAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179784 82 + 62195757 CGACAGCAAAACCTCCTAATGT---TTTAAAATTTAAAC---GG--CTCACACAGAAATGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110088086 82 - 110113093 TGACAGCAAAACCTCCTAATGT---TTTAAAATTTAAAC---GG--CTCACACAGAAACGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827521 82 - 92844088 CGATAGCAAAACCTCCTGATGT---TTTAAAATTTAAAC---AA--CTCACACAGAAATGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493189 82 + 96509753 CGATAGCAAAACCTCCTGATGT---TTTAAAATTTAAAC---AA--CTCACACAGAAATGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963155 82 - 16982598 CCCTAGCAAAACCTCCTGATGT---TTTAAAATTTAAAC---AA--CTCACACAGAAATGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765103 82 - 3785965 CGATAGCAAAACCTCCTGATGT---TTTAAAATTTAAAC---AA--CTCACACAGAAATGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355085 82 - 90373283 CGACAGCAAAACCTCCTGATGT---TTTAAAATTTAAAC---AA--CTCACACAGAAATGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155861 82 - 179258 CGATAGCAAAACCTCCTGATGT---TTTAAAATTTAAAC---AA--CTCACACAGAAAGGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625377 82 - 5823884 CGACAGCAAAACCTCCCGATGT---TTTAAAATTTAAAC---AA--CTCACACAGAAATGAGAGTTCCAATTGAT-----TTT----A----TTTAAAATAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183522 49 + 159171411 CAATAGCAAAACGTCCTAATAT---TTTAAAATTTAAAC---AA--CTCACACGGAA---------------------------------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346334 49 + 16356641 CAACAGCAAAACGTCCTAATCT---TTTAAAATTTAAAC---AA--CTCACATGGAA---------------------------------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220118 49 + 1231380 TAACAGCAAAACGTCCTAATAT---TTTAAAATTTAAAC---AA--CTCACATGGAA---------------------------------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746395 49 + 11732439 CAACAGCAAAACATCCTAATAT---TTTAAAATTTAAAC---AA--CTCACATGGAA---------------------------------------------- i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181852183 83 + 182113224 -------------TCCTGATGTTTGTTTCATATTTAAAA---TATCTTTTTACAAAAATAGGATTTCAAAGTGATGAGGATTT----AGGATTTCCAAATGAA i mm10.chr2 C 0 I 1 s canFam3.chr24 47667013 79 + 47698779 -TTTATCCAGA-----TACTGT---TTTGTAATTTAAATAGAAA--TTTACGCGGCAATGAGAATTGCAAATGAT-----TTT----A----TTTAAGGTAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339824 72 - 397369 ----------ATTCAGTTTTGT---TTTATCAATTAAACAGAAA--TTCTCCCAGCAATGAGAA-------TGat-----tttttaaa----tttaaaataaa i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1926960 176 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e gorGor5.CYUI01015848v1 565957 1 - 578057 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=522715.000000 s hg38.chr20_KI270870v1_alt 177233 58 + 183433 ACTAT-CAGGATG-------C-TCTCTGATCATTTAGAAAATTTGGAAAATG--CAAA------------------AAATAATAGGA s panTro5.chr20 66512650 58 + 66533130 ACTAT-CAGGATG-------C-TCTCTGATCATTTAGAAAATTTGGAAAATG--CAAA------------------AAATAATAGGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179866 58 + 62195757 ACTAT-CAGGATG-------C-TCTCTGATCATTTAGAAAATTTGGAAAATG--CAAA------------------AAATAATAGGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 565958 58 - 578057 ACTAT-CAGGATG-------C-TCTCTGATCATTTAGAGAATTTGGAAAATG--CAAA------------------AAATAATAGGA i gorGor5.CYUI01015848v1 I 1 C 0 s nomLeu3.chr13 110088168 58 - 110113093 ACTAT-CAGGATG-------C-TCTCtgatcatttagaaaatttggaaaatg--caaa------------------aaataatagga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827603 76 - 92844088 ACTAT-CAGGATG-------C-TCTCtgatcatttagaaaatttggaaaatg--caaattttaggaagggaaatgcaaataatagga i rheMac8.chr10 C 0 I 34 s macFas5.chr10 96493271 76 + 96509753 ACTAT-CAGGATG-------C-TCTCtgatcatttagaaaatttggaaaatg--caaattttaggaagggaaatgcaaataatagga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963237 76 - 16982598 ACTAT-CAGGATG-------C-TCTCtgatcatttagaaaatttggaaaatg--caaattttaggaagggaaatgcaaataatagga i macNem1.NW_012014244v1 C 0 I 34 s cerAty1.NW_012001373v1 3765185 76 - 3785965 ACTAT-CAGGATG-------C-TCTCtgatcatttagaaaatttggaaaatg--caaattttaggaagggaaatgcaaataatagga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355167 76 - 90373283 ACTAT-CAGGATG-------C-TCTCtgatcatttagaaaatttggaaaatg--caaattttagggagggaaatgcaaataatagga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 155943 76 - 179258 ACTAT-CAGGATG-------C-TCTCtgatcatttagaaaatttggaaaatg--caaattttaggaagggaaatgcaaataatagga i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625459 76 - 5823884 ACTAT-CAGGATG-------C-TCTCtgatcatttagaaaatttggaaaatg--caaattttaggaagggaaatgtaaataatagga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183571 48 + 159171411 ---------GATG----------CTCtgatcatttagaaaatttggaaaata--ccaa------------------aaatattagga i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346383 48 + 16356641 ---------GATG----------CTCtgatcatttagaaaatttggaaaatg--caaa------------------aaataatggga i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220167 48 + 1231380 ---------GATG----------CTCtgatcatttagaaaatttggaaaatg--caaa------------------aaataatagga i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746444 48 + 11732439 ---------Gatg----------ctctgatcgtttagaaaatttggaaaatg--caaa------------------aaataatagga i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181852267 60 + 182113224 ACTATCCATCATA-------CTTTTCTGATCACTTAAAACATTTGGTAAACC--TCTG------------------Agtgtgtgtgt i mm10.chr2 I 1 C 0 s canFam3.chr24 47667092 62 + 47698779 GCTGTTCAGCATGGATTCTGC-ATTCTAAtcatttagaaaatttgtaaaatg--catg------------------aaa----aggg i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339896 64 - 397369 aCTATTCTGCATATGCTCTGC-TTTCTAATCacttaggaaatatgaaaaatgcccaaa------------------aagaaat---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1926960 176 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=25644.000000 s hg38.chr20_KI270870v1_alt 177291 3 + 183433 AGG s panTro5.chr20 66512708 3 + 66533130 AGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179924 3 + 62195757 AGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566016 3 - 578057 AGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088226 3 - 110113093 agg i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3765261 3 - 3785965 agg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355243 3 - 90373283 agg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156019 3 - 179258 agg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625535 3 - 5823884 agg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183619 3 + 159171411 agg i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16346431 3 + 16356641 agg i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1220215 3 + 1231380 agg i cebCap1.NW_016107870v1 C 0 I 33 s aotNan1.NW_018500483v1 2746492 3 + 11732439 agg i aotNan1.NW_018500483v1 C 0 I 33 s mm10.chr2 181852327 1 + 182113224 --g i mm10.chr2 C 0 I 7 s canFam3.chr24 47667154 3 + 47698779 aaa i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339960 3 - 397369 aga i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1926960 176 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e macNem1.NW_012014244v1 16963313 34 - 16982598 I e rheMac8.chr10 92827679 34 - 92844088 I e otoGar3.GL873542 22919588 1921 + 22939663 I e macFas5.chr10 96493347 0 + 96509753 C a score=62179.000000 s hg38.chr20_KI270870v1_alt 177294 51 + 183433 GAAAAGTTTTGCATAGTCTTACAAAAAAAAAAAAAAGTT------------TTGCAAAAAGTT------- s panTro5.chr20 66512711 49 + 66533130 GAAAAGTTTTGCATAGTCTTAC--AAAAAAAAAAAAGTT------------TTGCAAAAAGTT------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179927 48 + 62195757 GAAAAGTTTTGCATAGTCTTAC---AAAAAAAAAAAGTT------------TTGCAAAAAGTT------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566019 50 - 578057 GAAAAGTTTTGCATAGTCTTAC-AAAAAAAAAGAAAGTT------------TTGCAAAAAGTT------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088229 35 - 110113093 gaaaagttttatgtagtcccaccacccagagacaa----------------------------------- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96493347 34 + 96509753 -aaaagttttgcatagtcccaccactcagagacaa----------------------------------- i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3765264 35 - 3785965 aaaaagttttgcatagtcccaccactcagagacat----------------------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355246 35 - 90373283 aaaaagttttgcatagtcccaccactcagagacaa----------------------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156022 35 - 179258 aaaaagttttgcatagtcccaccactcagagacaa----------------------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625538 35 - 5823884 gaaaagttttacatagtcccaccactcagagacaa----------------------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183623 32 + 159171411 aaaaaattgtgcatagtctcac---ccagagacaa----------------------------------- i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16346435 32 + 16356641 aaaaagttgtgcatagtcccac---ccagagacaa----------------------------------- i saiBol1.JH378156 I 1 C 0 s mm10.chr2 181852335 63 + 182113224 gtgtgtgtgtgtgtgtgtgtgtAAGAGAGAGAGAGAGACTATGAATGTGAATTATAAATAGTT------- i mm10.chr2 I 7 C 0 s canFam3.chr24 47667157 33 + 47698779 --aaaaatcaccacgatcttaccacccaaagataa----------------------------------- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339963 35 - 397369 gaaaaatt----ataccccccc---ccaaagataa----------------------------tcattgt i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1926960 176 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e macNem1.NW_012014244v1 16963313 34 - 16982598 I e cebCap1.NW_016107870v1 1220218 33 + 1231380 I e aotNan1.NW_018500483v1 2746495 33 + 11732439 I e rheMac8.chr10 92827679 34 - 92844088 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=2997.000000 s hg38.chr20_KI270870v1_alt 177345 1 + 183433 T s panTro5.chr20 66512760 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179975 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566069 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s calJac3.chr5 58183655 1 + 159171411 t i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346467 1 + 16356641 t i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220251 1 + 1231380 t i cebCap1.NW_016107870v1 I 33 C 0 s aotNan1.NW_018500483v1 2746528 1 + 11732439 t i aotNan1.NW_018500483v1 I 33 C 0 s mm10.chr2 181852398 1 + 182113224 C i mm10.chr2 C 0 I 7 s dasNov3.JH569290 339998 1 - 397369 t i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1926960 176 - 2029793 I e canFam3.chr24 47667190 0 + 47698779 C e cerAty1.NW_012001373v1 3765299 0 - 3785965 C e colAng1.NW_012114444v1 5625573 0 - 5823884 C e chlSab2.chr2 90355281 0 - 90373283 C e micMur3.chr18 56932439 1924 + 57149010 I e manLeu1.NW_012101652v1 156057 0 - 179258 C e macNem1.NW_012014244v1 16963313 34 - 16982598 I e nomLeu3.chr13 110088264 0 - 110113093 C e rheMac8.chr10 92827679 34 - 92844088 I e otoGar3.GL873542 22919588 1921 + 22939663 I e macFas5.chr10 96493381 0 + 96509753 C a score=216741.000000 s hg38.chr20_KI270870v1_alt 177346 17 + 183433 TACATTTTGGCAAATCT s panTro5.chr20 66512761 17 + 66533130 TACATTTTGGCAAATCT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179976 17 + 62195757 TACATTTTGGCAAATCT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566070 17 - 578057 TACATTTTGGCAAATCT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088264 17 - 110113093 tacgttttggcagatct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827713 17 - 92844088 tacattttggcaaatgt i rheMac8.chr10 I 34 C 0 s macFas5.chr10 96493381 17 + 96509753 tacattttggcaaatct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963347 17 - 16982598 tacattttggcaaatct i macNem1.NW_012014244v1 I 34 C 0 s cerAty1.NW_012001373v1 3765299 17 - 3785965 tacattttggcaaatct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355281 17 - 90373283 tacattttggcaaatct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156057 17 - 179258 tacattttggcaaatct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625573 17 - 5823884 tacattttggcaaatct i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183656 17 + 159171411 aacattttggcaaatct i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346468 17 + 16356641 aacattttggcaaatct i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220252 17 + 1231380 aacattttggcaaatct i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746529 17 + 11732439 aacgttttggcacatct i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181852406 17 + 182113224 TACATTTTGGTTAATTT i mm10.chr2 I 7 C 0 s canFam3.chr24 47667190 17 + 47698779 tgcatgttggcaaattc i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 339999 17 - 397369 aacatttcggtgaattt i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1926960 176 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=45410.000000 s hg38.chr20_KI270870v1_alt 177363 3 + 183433 CTT- s panTro5.chr20 66512778 3 + 66533130 CTT- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179993 3 + 62195757 CTT- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566087 3 - 578057 CTT- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088281 3 - 110113093 ctt- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827730 3 - 92844088 ctt- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493398 3 + 96509753 ctt- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963364 3 - 16982598 ctt- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765316 3 - 3785965 ctt- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355298 3 - 90373283 ctt- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156074 3 - 179258 ctt- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625590 3 - 5823884 ctt- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183673 3 + 159171411 ctt- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346485 3 + 16356641 ctt- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220269 3 + 1231380 ctt- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746546 3 + 11732439 ctt- i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1927136 3 - 2029793 ctt- i proCoq1.NW_012150197v1 I 176 C 0 s mm10.chr2 181852423 3 + 182113224 CTT- i mm10.chr2 C 0 C 0 s canFam3.chr24 47667207 3 + 47698779 ctt- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 340016 4 - 397369 cttt i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56932439 1924 + 57149010 I e otoGar3.GL873542 22919588 1921 + 22939663 I a score=1742800.000000 s hg38.chr20_KI270870v1_alt 177366 126 + 183433 CCAGAAA-----GGTTTTTTGATTTATTAGGAATCACCTATGAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAGGTTCTAAG--AACTAGACACGGTTCTTGAAATTTG-AT--AATGAGCAACAATAGG s panTro5.chr20 66512781 126 + 66533130 CCAGAAA-----GGTTTTTTGATTTATTAGGAATCATCTATGAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAGGTTCTAAG--AACTAGACACGGTTCTTGAAATTTG-AT--AATGAGCAACAATAGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62179996 126 + 62195757 CCAGAAA-----GGTTTTTTGATTTATTAGGAATCATCTATGAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAGGTTCTAAG--AACTAGACACGGTTCTTGAAATTTG-AT--AATGAGCAACAATAGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566090 126 - 578057 CCAGAAA-----GGTTTTTTGATTTATTAGGAATCATCTATGAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAGGTTCTAAG--AAATAGACACGGTTCTTGAAATTTG-AT--AATGAGCAACAATAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088284 126 - 110113093 ccagAAA-----GGTTTTTTGATTTCTTAGGAATCATCTATTAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAGGTTCTAAG--AAATAGACACGGTTCTTGAAATTTG-AT--AATgagcaacaatagg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827733 126 - 92844088 ccagAAA-----AGTTTTTTGGTTTATTAGGAATCATCTATTAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAAGTTCTAAG--AAATAGACACGGTTCTTGAAATTTG-AT--AATGAGCAACAATAGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493401 126 + 96509753 ccagAAA-----AGTTTTTTGGTTTATTAGGAATCATCTATTAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAAGTTCTAAG--AAATAGACACGGTTCTTGAAATTTG-AT--AATGAGCAACAATAGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963367 126 - 16982598 ccagAAA-----AGTTTTTTGGTTTATTAGGAATCATCTATTAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAAGTTCTAAG--AAATAGACACGGTTCTTGAAATTTG-AT--AATGAGCAGCAATAGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765319 126 - 3785965 ccagAAA-----AGTTTTTTGGTTTATTAGGAATCATCTATTAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAGGTTCTAAG--AAATAGACACGGTTCTTGAAATTTG-AT--AATGAGCAACAATAGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355301 123 - 90373283 ccagAAA-----AGTTTTTTGGTTTGTTAGGAATCATCTATTAAATGATTACACTTTGCTTTGGTCTCCACTAAGTACAGGTTCTAAG--AAATAGACACAG---TTGAAATTTG-AT--AATGAGCAACAATAGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156077 126 - 179258 ccagAAA-----AGTTTTTTGGTTTATTAGGAATCATCTATTAAATGATTACACTTTGCTTTGGTCTCTACTAAGTACAGGTTCTAAG--AAGTAGACACGGTTCTTGAAATTTG-AT--AATGAGCAACAATAGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625593 126 - 5823884 ccagAAA-----GGTTTTTTGGTTTATTAGGAATCATCTATTACATGATGACACTTTGCTTTGGTCTCTACTAAGTACAGGTTCTAAG--AAATAGACACGGTTCTTGAAATGTG-AT--AATGAGCAACAATAGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183676 126 + 159171411 ctagaaa-----tgttttttAATTTATTAGGAATCATTTATTAAATGATTACACTTTGTTTTGGTCTCTGCTAAGTACAGGTCCTAAG--AAATAGACATGATTCTTGAAATTTG-AT--AATGAGCAACAAGAGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346488 126 + 16356641 ccagaaa-----tgttttttAATTTATTAGGAATCATTTATTAAATGATTATACTTTGTTTTGGTCTCTGCTAAGTACAGGTCCTAAG--AAATAGACACGACTCTTGAAATCCA-AT--AATGAGCAACAATAGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220272 126 + 1231380 ccagaaa-----tgttttttAATTTATTAGGAATCATTTATTAAATGATTACACTTTGTTTTGGTCTCTGCTAAGTACAGGTCCTAAG--AAATAGACACGATTCTTGAAATTTG-AT--AATGAGCAACAATAGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746549 126 + 11732439 ccagaaa-----tgttttttAATTTATTAGGAATCATTTATTAAATGATTGCACTTTATTTTGGTCTCTGCTAAGTACAGGCCCTAAG--AAATAGAAACGATTCTTGAAATTTG-AT--AATGAGCAAGAATAGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1927139 127 - 2029793 ccagAAA-----TGTTTTTTAATTTATGAAGAATCATTTATCAAATAGTTAGACTTTGCTTTGGTCTCTGCCAAGTACAAGTCCTCTG--AAACAAACACAGTCCTTGAAATTTGAAT--AATGAGCAGCAGTAGG i proCoq1.NW_012150197v1 C 0 I 20 s otoGar3.GL873542 22921509 118 + 22939663 cCAGAAA-----TGTTTTTTAATTTATGAAGAATAATTTATGGAATAGATAGGCTTTGTTT-----TCTGCTAAGTATAAGTCCTATG--AAACAGACACAGTCCTTGAAATTTGAAT--AATGAGCAGTAG---- i otoGar3.GL873542 I 1921 C 0 s mm10.chr2 181852426 104 + 182113224 CCAAAAA-------TACTTCAATTAGTGGAGAATTGTTTACTAAATTGTCCTACTTTG--------TGTGTCAGGTA-------------ACATAGACAAAG-CCTTGACATTTG-GT--AACCAGCCACAATGAA i mm10.chr2 C 0 C 0 s canFam3.chr24 47667210 131 + 47698779 ccagtat--tttttttTTTTAATTTGTGAGGAATCATTTATTAGATAGTAATGCTCTGCCTTGGTCTCTGCTAAGTGGAGGTCACATGCTATATAGATGCGGTCTGTGAAATGTG-GT--AATGAGCAGCAGTGGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 340020 130 - 397369 tcagaaatttttttttttttaatttatgaggaatcatttataAAATAGTTAAACTTTGCCTTGGTCTCTGCTAAGTGTAGGCTATATG--AAATAGACATAGTCCTTAAAATTTG-ATTAGAAGAACAACAAT--- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56932439 1924 + 57149010 I a score=146438.000000 s hg38.chr20_KI270870v1_alt 177492 16 + 183433 ACATGCAAAACGGT-----TA s panTro5.chr20 66512907 16 + 66533130 ACATGCAAAACGGT-----ta i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180122 16 + 62195757 ACATGCAAAACGGT-----TA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566216 16 - 578057 ACATGCAAAACGGT-----ta i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088410 21 - 110113093 acatgcaaaacggtttgagta i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827859 21 - 92844088 ACATGCAAAACggttggagta i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493527 21 + 96509753 ACATGCAAAACGGTTGGAGTA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963493 21 - 16982598 ACATGCAAAACggttggagta i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765445 21 - 3785965 ACATGCAAAACggttggagta i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355424 21 - 90373283 ACATGCAAAACGGTTGGAGTA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156203 21 - 179258 ACATGCAAAACggttggagta i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625719 21 - 5823884 ACATGCAAAACggttggagta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183802 21 + 159171411 ATATGCAAAAGGGTCTGAGTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346614 21 + 16356641 ATACGCAAAAGggctagagta i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220398 21 + 1231380 GTATGCAAAAGAGTTAGGGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746675 16 + 11732439 ATATGCAAAAGGGT-----TA i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22921627 16 + 22939663 GTATACAGAGCGGT-----TA i otoGar3.GL873542 C 0 I 5 s mm10.chr2 181852530 21 + 182113224 ACATACAAAGAGCTTGGAAGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47667341 16 + 47698779 ATACCGAAAGGGGCTG----- i canFam3.chr24 C 0 I 6 s dasNov3.JH569290 340150 14 - 397369 --ATACAGAGGGACTT----- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1927266 20 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I a score=915646.000000 s hg38.chr20_KI270870v1_alt 177508 73 + 183433 Attagggaaggtttggcagagggtgatgt----ctgtgcttggc--cttcaagggcaaaaaggagttccctaaagagag s panTro5.chr20 66512923 73 + 66533130 attagggaaggtttggcagagggtgatgt----ctgtgcttggc--cttcaagggcaaaaaggagttccctaaagagag i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180138 73 + 62195757 Attagggaaggtttggcagagggtgatgt----ctgtgcttcgc--cttcaagggcaaaagggagttccctaaagagag i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566232 73 - 578057 attagggaaggtttggcagagggtgatgt----ctgtgcttggc--cttcaagggcaaaaaggagttccctaaagagag i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088431 73 - 110113093 attagggaaggtttggcagagtgtgatgt----ctgtgcttggc--cttcaagggcaaaaaggaattccctaaagagag i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827880 71 - 92844088 attagggaaggtttggcagaggatgatgt----ttgtgctcggc--cttcaagggcaaaaagcaattccccaa--agag i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493548 71 + 96509753 ATTAGGGAAGGTTTGGCAGAGGATGATGT----TTGTGCTCGGC--CTTCAAGGGCAAAAAGCAATTCCCTAA--AGAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963514 71 - 16982598 attagggaaggtttggcagaggatgatgt----ttgtgctcggc--cttcaagggcaaaaagcaattccctaa--agag i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765466 71 - 3785965 attagggaaggtttggcagaggatgatat----ttgtgcttggc--cttcaagggcaaaaagcaattccctaa--agag i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355445 73 - 90373283 ATTAGGGAAGGTTTGGCAGAGGATGATGT----TTGTGCTCGGC--CCTCAAGGGCAAAAAGCAATTCCCTAAAGAGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156224 71 - 179258 attagggaaggtttggcagaggatgatgt----ttgtgctcggc--cttcaagggcgaaaagcagttccctaa--agag i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625740 73 - 5823884 attagggaaggtttggcagaggatgatgt----ttgtgctcggc--cttcaagggcaaaaagcaattccctaaagagag i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183823 71 + 159171411 ATTAGGGAAGGTTTGACAGAGGATGATGT----ATGTGCTTGGT--CTTCAAGGGCAAAAAAGAATTCCCTAA--ACAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346635 71 + 16356641 attagggaaggtttgacagaggacgacat----atgtgtttggc--ctttgagggcaaagaggaattccctaa--acag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220419 71 + 1231380 ATTAGGGCAGGTTTGGCAGAGGGTGATGT----ATGTGCTTGGC--CTTCGAGGGCAAAAAGGAATTCCCTAA--ACAG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746691 71 + 11732439 ATTAGGGAAGGTTTGACAGAGGATGATGT----ATGTGCATGGT--CTTCAAGGGCAAAAAGGAATTCCCTAA--ACAG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1927286 71 - 2029793 attagggaaggtttgac--aggatgacgt----ctgtagttgga--cttcaagggtaaaaaggaattccctgaagagag i proCoq1.NW_012150197v1 I 20 C 0 s otoGar3.GL873542 22921648 68 + 22939663 ATTAGGAAAAGTTTG-----GAATGGTGT----TTGTACTTGGA--TTTCAGGGGTGAAAAGGAACTCTCTAAAGAGAG i otoGar3.GL873542 I 5 C 0 s mm10.chr2 181852551 78 + 182113224 ATGAGGGAAGTTATG-TAGAGGATGATGTTATGTTGTGCTTGGTTATGTTCAGGGTGAAAGGAAACTTTCTTAAGAGAG i mm10.chr2 C 0 I 570 s canFam3.chr24 47667363 61 + 47698779 GCCAGGGAGCGTTTGACAGAGGATGGGAC----AT-----------TTT---GGGTGAAAATGAAGTCTCTGAAGAGAG i canFam3.chr24 I 6 C 0 s dasNov3.JH569290 340164 67 - 397369 ------AGAGGTTTGACAGAGGCTATGAT----ATTTGCTTGGT--CATCAAAGCTGAAAAGGATTTCCCTAAAGAGAG i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56932439 1924 + 57149010 I a score=195814.000000 s hg38.chr20_KI270870v1_alt 177581 15 + 183433 aagaaaggggagaaa s panTro5.chr20 66512996 15 + 66533130 aagaaaggggagaaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180211 15 + 62195757 aagaaaggggagaaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566305 15 - 578057 aagaaaggggagaaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088504 15 - 110113093 aagaaaggggaggaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827951 15 - 92844088 gagaaagtggagaaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493619 15 + 96509753 GAGAAAGTGGAGAAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963585 15 - 16982598 gagaaagtggagaaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765537 15 - 3785965 gagaaagtggagaaa i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355518 15 - 90373283 GAGAAAGTGGAGAAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156295 15 - 179258 gagaaagtggagaaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625813 15 - 5823884 gagaaagtggagAAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183894 15 + 159171411 AACAAAGGGGAGAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346706 15 + 16356641 aaaaaaggggagaaa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220490 15 + 1231380 AAAAAAGGGGAGAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746762 15 + 11732439 AAAAAAGGGGAGAAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1927357 15 - 2029793 aagaaagggaggaaa i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22921716 15 + 22939663 AAGAAAGGGAGGAAA i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47667424 15 + 47698779 AAGAAAGGGAGAAAA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 340231 15 - 397369 ACTAAAGAGAAAGAA i dasNov3.JH569290 C 0 I 13414 e mm10.chr2 181852629 570 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I a score=362090.000000 s hg38.chr20_KI270870v1_alt 177596 35 + 183433 agtaccagcagtggCAGGACATAAATC--AAAATGCG s panTro5.chr20 66513011 35 + 66533130 agtaccagcagtggcaggaCAGAAATC--AAAATGCG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180226 35 + 62195757 agtaccagcagtggcgggacagaagtg--aaaatgcg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566320 35 - 578057 agtaccagcagtggCAGGGCAGAAATC--AAAATGCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088519 35 - 110113093 agtgccagcagtggCAGGGCAGAAATC--AAAATGCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92827966 35 - 92844088 agtgccagCAATGGTGGGGCAGAAGTC--AAAATGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493634 35 + 96509753 AGTGCCAGCAATGGTGGGGCAGAAGTC--AAAATGCA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963600 35 - 16982598 agtgccagcaatggtagggcagaagtc--aaaatgca i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765552 35 - 3785965 agtgccagcaatggtagggcagaagtc--aaaatgca i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355533 35 - 90373283 AGTGCCAGCAATGGTAGGGCAGAAATC--AAAATGCA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156310 35 - 179258 agtgccagcaatggtagggcagaagtc--aagatgca i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625828 35 - 5823884 AGTGGCAGCAATGGTAGGGCAGAAATC--AAAATGCA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183909 35 + 159171411 AGTATCAGCAACGGCAGGACAGAAGTC--AAAGGGCG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346721 35 + 16356641 agtgtCAGCAACGGCAGGACAGAAGTC--AGAGCGAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220505 35 + 1231380 AGTGTCAGCAACGGCAGGATAGAAGTC--AAAGCGCG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746777 35 + 11732439 AGTGTCAGCAGCGGCAGGACAGAAGCC--AGAGCGCG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1927372 35 - 2029793 agtgtcatcaaaggcagggcaaaattt--aagatgtg i proCoq1.NW_012150197v1 C 0 I 2 s otoGar3.GL873542 22921731 35 + 22939663 AGTGTCAGCAGAAGCAGGGCAAAATTT--AAAatgtg i otoGar3.GL873542 C 0 I 114 s canFam3.chr24 47667439 37 + 47698779 GGCATGAGCAGAGGCTGATGGGGACTTTGCACATGCG i canFam3.chr24 C 0 C 0 e mm10.chr2 181852629 570 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=30465.000000 s hg38.chr20_KI270870v1_alt 177631 2 + 183433 TG s panTro5.chr20 66513046 2 + 66533130 TG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180261 2 + 62195757 tg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566355 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088554 2 - 110113093 TG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828001 2 - 92844088 TG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493669 2 + 96509753 TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963635 2 - 16982598 TG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765587 2 - 3785965 TG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355568 2 - 90373283 TG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156345 2 - 179258 TG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625863 2 - 5823884 TG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183944 2 + 159171411 TG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346756 2 + 16356641 TG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220540 2 + 1231380 TG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746812 2 + 11732439 TG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1927409 2 - 2029793 TG i proCoq1.NW_012150197v1 I 2 C 0 s otoGar3.GL873542 22921880 2 + 22939663 tg i otoGar3.GL873542 I 114 C 0 s canFam3.chr24 47667476 2 + 47698779 CG i canFam3.chr24 C 0 C 0 e mm10.chr2 181852629 570 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=1207306.000000 s hg38.chr20_KI270870v1_alt 177633 102 + 183433 -TT-CCC-----CG-----------------------------TGTAGTC-AGAGTTGGGACTGATGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTAGGCTGGGGAGAGCTATCAGATGCTTTAA s panTro5.chr20 66513048 102 + 66533130 -TT-CCC-----CG-----------------------------TGTAGTC-AGAGTTGGGACTGATGGGAGAAGCT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTAGGCTGGGGAGAGCTAGCAGATGCTTTAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180263 102 + 62195757 -TT-CCC-----CG-----------------------------TGTAGTC-AGAGTTAGGACTGATGGGAGAAGCT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTAGGCCGGGGAGAGCTAGCAGATGCTTTAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566357 102 - 578057 -TT-CCC-----CG-----------------------------TGTAGTC-AGAGTTGGGACTGGTGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTAGGCTGGGGAGAGCTATCAGATGCTTTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088556 102 - 110113093 -TT-CCC-----CG-----------------------------TGTAGTC-AGAGTTGGGACTGGTGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTAGGCTGGGGAGAGCTATCAGATGCTTTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828003 102 - 92844088 -TT-CCC-----CG-----------------------------TATAGTC-AGAGTTGGGACTGGTGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTTGGCTGGGCAGAGCTATCAGATGCTTCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493671 102 + 96509753 -TT-CCC-----CG-----------------------------TATAGTC-AGAGTTGGGACTGGTGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTTGGCTGGGCAGAGCTATCAGATGCTTCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963637 102 - 16982598 -TT-CCC-----CG-----------------------------TATAGTC-AGAGTTGGGACTGGTGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTTGGCTGGGCAGAGCTATCAGATGCTTCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765589 102 - 3785965 -TT-CCC-----CG-----------------------------TATAGTC-AGAGTAGGGACTGGTGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTTGGCTGGGCAGAGCTATCAGATGCTTCAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355570 102 - 90373283 -TT-CCC-----CG-----------------------------TATAGTC-AGAGTTGGGACTGGTGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTTGGCTGGGGAGAGCTATCAGATGCTTCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156347 102 - 179258 -TT-CCC-----CG-----------------------------TATAGTC-AGAGTTGGGACTGGTGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTTGGCTGGGCAGAGCTATCAGATGCTTCAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625865 102 - 5823884 -TT-CCC-----TG-----------------------------TATAGTC-AGAGTTGGGACTGGTGGGAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGTTTATCATGTTGGCTGGGGAGAGCTATCAGATGCTTCAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58183946 103 + 159171411 -TTCCCC-----CA-----------------------------TGTAGTC-AGAGTTGAGACAGGTGGGAGAGACT-A--CTGGTATGTAGGTTAGAATTGGGCTTATCATGTAGGCTGGAGAAAGCTATCAGATACTTTAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346758 104 + 16356641 -TTCCCC-----CG-----------------------------TGTAGTCAAGAGTTGGGACAGGTGGGAGAAACC-G--CTGGTATGTTGGTTAGAATTGGGCTTTTCACGTAGGCTGGAGAAAGCTATCAGATACTTTAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220542 103 + 1231380 -TTCCCC-----CG-----------------------------TGCAGTC-AGGGTTGAGACAGGTGGTAGAAACT-A--CTGGTATGTAGGTTAGAATTGGGCTTATCATGTAGGCTGGAGAAAGCTATCAGATACATTAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746814 98 + 11732439 -TT-TCC-----CG-----------------------------CGTAGTC---AGTTGAGACAGGTGGGA-AAACC-A--CTGGTATGTAGGTTAGAATTGGGCTTATCGTGTAGGCTGGAG-AAGCTATCAGATACTTTAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1927411 102 - 2029793 -CC-CCC-----TC-----------------------------TGTGG---AGAGTTGGGATGTGTGGGAAAAACT-AGACTGGTATGCATGTTAGAGTTGAGTTTGTCACCTAGGCTGTGGACGGCTATCAGATATTTTAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22921882 138 + 22939663 -tt-gctgacagtcaagaAAAACAGGGAAAAATAAAAAAAAAATGTGGTC-AGCGTTGGGAAATGTGGGAGAAACG-AGGCTGGTATGCAGGTTAGGGTTGAGTTTATCACCTATGCTGTGGATAGCTATCAGATGTTTTAG i otoGar3.GL873542 C 0 I 240 s mm10.chr2 181853199 96 + 182113224 -TT-CAT-----GG-----------------------------TGTAGTC-ACTGT-GGGATATGTTGGAGAAACTGA--CTGGAATGTAGGTTGGGTTTTAATTCACTATGT-GGCTGTGGAGAGCT-TCAGATATT---- i mm10.chr2 I 570 C 0 s canFam3.chr24 47667478 99 + 47698779 CTC-CAT-----GG-----------------------------TGTGGTC-CGGGTGGGGGTGTACAGGAGAAACT-AGCCCACTATGTAGGTTAGACTTGAGTTTATCATGGAGGCTGTGGAAAGCCGCCAGATG------ i canFam3.chr24 C 0 C 0 e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=2345994.000000 s hg38.chr20_KI270870v1_alt 177735 219 + 183433 ATAAAAGATACAGTGCCTGTGTATCCTGG--ATAAGCCTGGTTGTCGTCGGGTGGAGGGTGAATCTGTCAAATGCGTGCTC--TGAAAGTCTCATCAGAATAACC-TTTTAAGTAACTGCCGCCCTTGGCG-GGGAGGGCACCAGCTTCCAGAGCCTTAGCAGAGTTTGGGAAGGCAGGGGCATCTTCGGGGTATTTATGAGACTTTTTGAGGGTCTGGTTG-AAA s panTro5.chr20 66513150 219 + 66533130 ATAAAAGATACAGTGCCTGTGTATCCTGG--ATAAGCCTGGTTGTCGTCGGGTGGAGGGTGAATCTGTCAAATGCGTGCTC--TGAAAGTCTCACCAGAATAACC-TTTTAAGTAACTGCCGCCCTTGGCG-GGGAGGGCACCAGCTTCCAGAGCCTTAGCAGAGTTTGGGAAGGCAGGGGCATCTTCGGGGTATTTATGAGACTTTTTGAGGGTCTGGTTG-AAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180365 219 + 62195757 ATAAAAGATACAGTGCCTGTGTATCCTGG--ATAAGCCTGGTTGTCGTCGGGTGGAGGGTGAATCTGTCAAATGCGTGCTC--TGAAAGTCTCACCAGAATAACC-TTTTAAGTAACTGCCACCCTTGGCG-GGGAGGGCACCAGCTTCCAGAGCCTTAGCAGAGTTTGGGAAGGCAGGGGCATCTTCGGGGTATTTATGAGACTTTTTGAGGGTCTGGTTG-AAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566459 219 - 578057 ATAAAAGATACAGTGCCTGTGTATCCTGG--ATAAGCCTGGTGGTCGTCGGGTGGAGGGTGAATCTGTCAAATGCGTGCTC--TGAAAGTCTCACCAGAATAACC-TTTTAAGTAACTGCCGCCCTTGGCG-GGGAGGGCACCAGCTTCCAGAGCCTTAGCAGAGTTTGGGAAGGCAGGGGCATCTTCGGGGTATTTATGAGACTTTTTGAGGGTCTGGTTG-AAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088658 216 - 110113093 GTAAAAGATACAGTGCCTGTGTATCCTGG--ATAAGCCTGGTG---GTCGGGTGGAGGGTGAATCTGTCAAATGTGTGCTC--TGAAAGTCTCACCAGAATAACC-TTTTAAGTAACTGCCGCCCTTGGCa-gggagggcaccagcttccagagccttagcagagtttgggaaggcaggggcatctttggggtatttatgaggctttttgagggtctggttg-aaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828105 203 - 92844088 GCAAAAG---------------ATCCTGG--ATAAGCCTGGTG---GTCAGGTGGAGGGTGAATCTGTCAAATGCATGCTC--TGAAAATCTCACCAGAATAACCTTTTTAAGTAAGTGCTGCTCTTGGCT-gggaggtcaccagcttccagagccttaacagagtttgggaagacaagggcatctttggggtatttatgagactttttgagggtctggttcaaaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493773 203 + 96509753 GCAAAAG---------------ATCCTGG--ATAAGCCTGGTG---GTCAGGTGGAGGGTGAATCTGTCAAATGCATGCTC--TGAAAATCTCACCAGAATAACCTTTTTAAGTAAGTGCTGCTCTTGGCT-gggaggtcaccagcttccagagccttaacagagtttgggaaggcaagggcatctttggggtatttatgagactttttgagggtctggttgaaaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963739 203 - 16982598 GCAAAAG---------------ATCCTGG--ATAAGCCTGGTG---GTCAGGTGGAGGGTGAATCTGTCAAATGCATGCTC--TGAAAATCTCACCAGAATAACCTTTTTAAGTAAGTGCTGCTCTTGGCT-gggaggtcaccagcttccagagccttaacagagtttgggaaggcaagggcatctttggggtatttatgagactttttgagggtctggttgaaaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765691 203 - 3785965 GCAAAAG---------------ATCCTGG--ATAAGCCTGGTG---GTCAGGTGGAGGGTGAATCTGTCAAATGCATGCTC--TGAAAATCTCACCAGAATAACCTTTTTAAGTAAGTGCTGCTCTTGGCT-gggaggtcaccagcttccagagccttaacagagtttgggaaggcaagggcatctttggggtatttatgagactttttgagggtctggttgaaaa i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355672 203 - 90373283 GTAAAAG---------------ATCCTGG--ATAAGCCTGGTG---GTCAGGTGGAGGGTGAATCTGTCAAATGCATGCTC--TGAAAATCTCACCAGAATAACCTTTTTAAGTAACTGCTGCTCTTGGCT-gggaggtcaccagcttccagagccttaacagagtttgggaaggcaagggcatctttggggtatttatgagactttttgagggtctggttgaaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156449 203 - 179258 GCAAAAG---------------ATCCTGG--ATAAGCCTGGTG---GTCAGGTGGAGGGTGAATCTGTCAAATGCATGCTC--TGAAAATCTCACCAGAATAACCTTTTTAAGTAAGTGCTGCTCTTGGCT-GGGAGGTCACCAGCTTCCAGAGCCTTAACAGAGTTTGGGAAGGCAAGGGCATCTTTGGGGTATTTATGAGACTTTTTGAGGGTCTGGTTGAAAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5625967 201 - 5823884 GTAAAAG---------------ATCCTGG--ATAAGCCTGGTG---GTCAGGTGGAGGGTGAATCTGTCAAATGCATGCTC--TGAAAATCTCACCAGAATAATGTTTTTAAGTAACTGCTGCTCTTGGCT-gggaggtcaccagcttccagagccgtaacagagtttgggaaggcaagggcatctttagggtatt--tgagactttttaagggtctggttgaaaa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184049 216 + 159171411 ATAAAAGATGCAGTGCCTCTGTATCCTGG--TTAAGCCTGCTG---GTTGGGTGGAGGGTGAATCTGTCAAATGCATGCTC--TGAAAATCTCACCAGAATAACGTTTTTAGGTAAGTGCTGCTCTTGGTG-gggaaggcaccagcttccagagccttagcagagtttgggaaggcaaggacatctttgggatacttatgagaattttttagggtctggtt--aaa i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16346862 218 + 16356641 ATAAAAGATGCAGTGCCTCTGTATTCTGG--GTAAGCCTGGTG---GTTGGGTGGAGGGTGAATCTGTCAAATGCATGCTC--TGAAAATCTCACCAGAATAACCTTTTTAAGTACGTGCTGTTCTTGGTG-gggaggacatcagcttccagagcctcagcagagtgtgggaaggcaaagacatctttggggtacttaggagaattttttagggtctggttgaaaa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220645 217 + 1231380 ATAAAAGATGCAGTGCCTGTGTATCCTGG--CTAAGCCTGGTG---GTTGGGTGGAGGGTGAATCTGTCAAATGCGTGCTC--TGAAAATCTCACCAGAATAACCTTTTTAAGTAAGTGCTGCTCTTGGTG-GGGAGGGCACCAGCTT-CAGAGCCTCAGCAGAGTGTGGGAAGGCAAGGACATCTTTGCGGTACTTATGAGAATTTTTTAGGGTCTGGTTGAAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2746912 214 + 11732439 ATAAAAGGTGCAGTGCCTCTGTATCCTGG--ATAAGCCTGGTG---GTTGGGTGGAGGGTGAATCTGTCAAATGCGTGCTC--TGAAAATCTCACCACAATAACCTTTTTAA----GTGCTGCTCTTGGTG-gggagggcaccagcttccagagccttagcagagtttgggaaggcaaggacatctgtggggtacttaggagaattttttagggtctggttgaaaa i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1927513 220 - 2029793 ATAATGGTCACAGCGCGTCCGTATCCTAG--ATAACCTTGGTG---GTTAGGTGGAGGGCGAATCTGTCAAATGCACGCTCCTTGAAAATCTCACCAGAATGACCTCTTTAAGCAAATGCTGCTCTtggttagggagggcatgagcttccagagacttaacagagtttgggaaaggaagggcaccactggggtatttatgagactttttgagagtctagttgaaa- i proCoq1.NW_012150197v1 C 0 I 469 s otoGar3.GL873542 22922260 196 + 22939663 ATAAAGGGTGCAGCACATCTGTGTCCTAGGTACAACCCTGGGG---GTTGGCTGGAGGGTGAATTTGTCAAATG---------------TCTCACCAAAATATGCTCTTTAAGCAAAAGTTGCTGTTGGTTAAAGAGGTGATGGGCTTCCAGAGACTTAAC----------AAAGCAAGGGCAATGCTGGACT-CTTATGAGACTTTTTGAGGGTCTAGTTGAAA- i otoGar3.GL873542 I 240 C 0 s mm10.chr2 181853295 202 + 182113224 ATTCAAGATGCCGTACATTTGTAT-AGGT--ATAATCCTATCA---ATCATTTGTAGGGTGAATTTGTCAGACTGGTTTTC--TGAAATTTT-----------GTTATTTAAACAAATGTGCCCCTACTAA-GAAAATGCACCATCCTTTGGCACAGTTTCTGGGTTTGG-AAGACAAGAAT-TCATGAAAACATTTGGGAGAC--TTTGAAAATCTAGTTAAACA i mm10.chr2 C 0 C 0 s canFam3.chr24 47667577 198 + 47698779 --------TGTGGTGCTTCTGTCTTCTGG--ATGACCCTGGTG---GCTGATTGGAGGGTGAATTTGT----TGTGTTCCC--TGGGAATCTCCCCAGGAGAAGC---TAACATAGCT--CGCAATCAGCC----AGGGCGTGGCCTTGCAGAACACGGCCTGagtgtcaggaggtgaggccatagtcggtgcatccatgaggcttcttgggtgtttggttgaaga i canFam3.chr24 C 0 C 0 e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=288105.000000 s hg38.chr20_KI270870v1_alt 177954 28 + 183433 CGAGCCGTTCCCT-GTGGGG--TTCGTCTGG s panTro5.chr20 66513369 28 + 66533130 TGAGCCGTTCCCT-GTGGGG--TTCGTCTGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180584 28 + 62195757 TGAGCCGTTCCCT-GTGGGG--TTCGTCTGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566678 28 - 578057 TGAGCTGTTCCCT-GTGGGG--TTCGTCTGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088874 30 - 110113093 tgagccgttccct-gtgagggcttcatctgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828308 30 - 92844088 tgagtctttccct-gtgagggcttcatctgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96493976 30 + 96509753 tgagtctttccct-gtgagggcttcatctgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963942 30 - 16982598 tgagtctttccct-gtgagggcttcatctgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765894 30 - 3785965 tgagtctttccct-gtgagggcttcatctgg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355875 30 - 90373283 tgagtctttccct-gtgaaggcttcatctgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156652 30 - 179258 TGAGTCTTTCCCT-GTGAGGGCTTCATCTGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626168 30 - 5823884 tgagtctttccct-gtgagggcttcatctgg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184265 30 + 159171411 tgagtctttccct-gtgagggtttcctctgg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347080 30 + 16356641 tgagtctttgcct-gtgagggtttcatgtgg i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220862 30 + 1231380 TGAGTCTTTCCCT-ATGAGGGTTTCATGTGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2747126 30 + 11732439 tgagtctttccct-gtgagggtttcatctgg i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22922456 31 + 22939663 TGAGTTTCTCCCTCATGAGAGTTTGACCAGG i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181853497 29 + 182113224 TGAGTGTTTCTGT-ATGAGGACTT-ATCAAG i mm10.chr2 C 0 C 0 s canFam3.chr24 47667775 29 + 47698779 caagcctcttggt-gtgagcgcttgattgg- i canFam3.chr24 C 0 I 2 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=1468805.000000 s hg38.chr20_KI270870v1_alt 177982 147 + 183433 CC-GATGAAGAATCATGACAATGTGGTGGGCAGT----TTGGATGCTTgttttgaggagatggctttgaagagagtgttagatgatcaacagtaatgtgatgct-tttagagtttctgaagtgacccattgagt----tacttgcaacttttctttt s panTro5.chr20 66513397 147 + 66533130 CC-GATGAAGAATCATGACAATGTGGTGGGCAGT----TTGGATGCTTgttttgaggagatggctttgaagagagtgttagatgatcaacagtaatgtgatgct-tttagagtttctgaagtgacccattgagt----tacttgcaacttttctttt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180612 147 + 62195757 CC-GATGAAGAATCATGACAATGTGGTGGGCAGT----TTGGATGCTTgttttgaggagatggctttgaagagagtgttagaggatcaacagtaatgtgatgct-tttagagtttctgaagtgacccattgagt----tacttgcaacttttctttt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566706 147 - 578057 CT-GATGAAGAATCATGACAATGTGGTGGGCAGT----TTGGATGCTTgttttgaggagatggctttgaagagagtgttagatgatcaacagtaatgtgatgct-ttcggagtttctgaagtgacccattgagt----tactggcaacttttccttt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110088904 145 - 110113093 ct-gattaagaatcatgacaatgtggtgggcagt----ttggatgcttgttttgaggagatggctttga--agagtgttagatgatcaacgttaatgtgatgct-tttagagtttctgaagtgacccattgagt----tatttgcaacttttctttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828338 147 - 92844088 cctga-taagaatcatgacaatgtggtgggcagt----ttggatgcttgttttgcggagatggttttgaagagaatgtaagataatcaatattaatgtgatgct-tttagagtttctgaagtgacccattgggt----tatttgcaacttttctttt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494006 147 + 96509753 cctga-taagaatcatgacaatgtggtgggcagt----ttggatgcttgttttgcggagatggttttgaagagaatgtaagataatcaatattaatgtgatgct-tttagagtttctgaagtgacccattgggt----tatttgcaacttttctttt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16963972 147 - 16982598 cctga-taagaatcatgacaatgtggtgggcagt----ttggatgcttgttttgcggagatggttttgaagagaatgtaagataatcaatattaatgtgatgct-tttagagtttctgaagtgacccattgggt----tatttgcaacttttctttt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3765924 148 - 3785965 cctgattaagaatcatgacaatgtggtgggcagt----ttggatgcttgttttgcggagatggttttgaagagaatgttagataatcaatattaatgtgatgct-tttagagtttctgaagtgacccattgggt----tatttgcaacttttctttt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90355905 148 - 90373283 cctgattaagaatcatgacaatgtggtgggcagt----ttggatgcttgttttgcggagatggttttgaagagaatgttagataatcagtattaatgtgatgct-tttagagtttctgaagtgacccattgggt----tatttgcaacttttctttt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156682 148 - 179258 CCTGATTAAGAATCATGACAATGTGGTGGGCAGT----TTGGATGCTTGTTTTGCGGAGATGGTTTTGAAGAGAATGTTAGATAATCAATATTAATGTGATGCt-tttagagtttctgaagtgacccattgggt----tatttgcaacttttctttt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626198 148 - 5823884 cctgattaagaatcatgacaatgtggtgggcagt----ttggatgcttgttttgcggagatggttttgaagagagtgttagatagtcaatattaatgtgatgct-tttagagtttctgaagtgacccattgggt----tatttgcaacttttctttt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184295 148 + 159171411 cctgattaagaatcatgacaacgtggtgggcact----tgggatgcttgttttgaggagatagctttgaagagagtgttagacgatcaacattaatgcgatgct-tttagagtttcttaagagacccatcaagt----tatttgcaacttttctttt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347110 146 + 16356641 cctgattaagaatcatgacaacgtggtgggcact----tgggatgcttgttttgaggagatagctttgaagagagtgttagacgatcaacatgaatgcgatgct-ttt--agtttcttaagtgactcatcaagt----tattggcaactttcctttt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1220892 148 + 1231380 CCTGATTAAGAATCATGACAATGTGGTGGGCACT----TGGGATGCTTGTTTTGAGGAGATAGCTTTGAAGAGAGTgttagatgatcaccattaatgtgatgct-tttagagtttcttaagtgacccaccaagt----tatttgcacgttttctttt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2747156 148 + 11732439 cctgattaagaatcatgacaatgtggtgggcatt----tgggatgcttgttttaaggagaaacctttgaagagagtgttagatgatcaacattcatgtgatgct-tttagagtttcttaagtgacccatcaagt----tatttgcaacttttctttt i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181853526 123 + 182113224 CCTGGCTAGGAACCTTAG----------------------GCATGCATTGCCTCCTGAAATG---------CGAATGTTGAGTAATAAACATTTGTGTGATTTG-GTTAGAATTTCTAAAGTGATCAGTTGGGTAGGGTGTTTGCAGTTTCTATC-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47667806 149 + 47698779 -ctgggtgagagttatgacagctcagagggtagtaccccgagatgccagctttgaggccagaactgtagagcaaatgctgaatgataaataat--cgtgatgttgtttatggttcctgaggtgaacagtccagt----tatttgtaactttgtctt- i canFam3.chr24 I 2 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e otoGar3.GL873542 22922487 0 + 22939663 C a score=573454.000000 s hg38.chr20_KI270870v1_alt 178129 49 + 183433 cctgggcc--agtt-tcctatactagtaaattcatgttggtaaagacagtgg s panTro5.chr20 66513544 49 + 66533130 cctgggcc--ggtt-tcctatactagtaaattcatgttggtaaagacagtgg i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180759 49 + 62195757 cctgggcc--ggtt-tcctatactagtaaattcatgttggtaaagacagtgg i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566853 49 - 578057 cctgggcc--agtt-tcctatactagtaaattcatgtttgtaaagacagtgg i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089049 49 - 110113093 cctgggcc--agtt-tcctagactagtaaagtcatgtttgtgaagacagtgg i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828485 51 - 92844088 cctgggccagagtt-tcctagactagtaaagtcatgttcgtgaagacagtgg i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494153 51 + 96509753 cctgggccagagtt-tcctagactagtaaagtcatgttcgtgaagacagtgg i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964119 51 - 16982598 cctgggccagagtt-tcctagactagtaaagtcatgttcgtgaagacagtgg i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766072 51 - 3785965 cctgggccagagtt-tcctagactagtaaagtcatgttcgtgaagacagtgg i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356053 51 - 90373283 cctgggccagagtt-tcctagactagtaaagtcatgttcgtgaagacagtgg i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156830 51 - 179258 cctgggccagagtt-tcctagactagtaaagtcatgttcgtgaagacagtgg i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626346 51 - 5823884 cctgggccagagtt-tcctagactagtaaagtcatgttcgtgaagacagtgg i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184443 51 + 159171411 cctgggctagagtt-tcctagactagtaaagtcatgtttgtgaagacagtgg i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347256 51 + 16356641 cctgggccagagtt-tcctagactagtaaagtcatgtttgtgaagacagcag i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221040 51 + 1231380 cctgggccagagtt-tcctagactagtaaagtcatgtttgtgaagacagtgg i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2747304 51 + 11732439 cctgggccagagtt-tcctagactcgtaaagtcatgtttgtgaagacagtag i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22922487 52 + 22939663 CCTGGGTAAGAATCATAAGAGATTACTAAAGTCATGTAAATGAAGACAGTGC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181853649 34 + 182113224 ------------TT-TTCTAGATCACTGAA-----GTTGATGAGACCAAGGG i mm10.chr2 C 0 C 0 s canFam3.chr24 47667955 51 + 47698779 cctgggccagagtt-ttctaaagtagcaaagttgtgtccgtggaggcagtgg i canFam3.chr24 C 0 I 34 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=95707.000000 s hg38.chr20_KI270870v1_alt 178178 9 + 183433 agtagaaaa s panTro5.chr20 66513593 9 + 66533130 agtagaaaa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180808 9 + 62195757 agtagaaaa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566902 9 - 578057 agtagaaaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089098 9 - 110113093 agtggcaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828536 9 - 92844088 aatagaaaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494204 9 + 96509753 aatagaaaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964170 9 - 16982598 aatagaaaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766123 9 - 3785965 aatagaaaa i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356104 9 - 90373283 aatagaaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156881 9 - 179258 aatagaaaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626397 9 - 5823884 aatagaaaa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184494 9 + 159171411 agtagaaaa i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347307 9 + 16356641 agtagaaaa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221091 9 + 1231380 agtagaaaa i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2747355 9 + 11732439 agcagaaaa i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22922539 9 + 22939663 GAGAGAGAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181853683 9 + 182113224 AATAAGAGA i mm10.chr2 C 0 I 195 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=40112.000000 s hg38.chr20_KI270870v1_alt 178187 6 + 183433 c-tctgt s panTro5.chr20 66513602 6 + 66533130 c-tctgt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180817 6 + 62195757 c-tctgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566911 6 - 578057 c-tctgt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089107 6 - 110113093 c-tcttt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828545 6 - 92844088 c-tctgt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494213 6 + 96509753 c-tctgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964179 6 - 16982598 c-tctgt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766132 6 - 3785965 c-tctgt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356113 6 - 90373283 c-tctgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156890 6 - 179258 c-tctgt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626406 6 - 5823884 c-tgtgt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184503 4 + 159171411 c---tgt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347316 6 + 16356641 c-tttgt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221100 6 + 1231380 c-tctgt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2747364 6 + 11732439 c-tctgt i aotNan1.NW_018500483v1 C 0 I 186 s otoGar3.GL873542 22922548 5 + 22939663 TGTCT-- i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=552186.000000 s hg38.chr20_KI270870v1_alt 178193 55 + 183433 gagtgtagaca-TACGTGATATGGGGTCATGTGAGTGTAGAT-GCGTGGTGTGGGGT s panTro5.chr20 66513608 55 + 66533130 gagtgtagaca-tacgtgatatggagtcatgtgagtgtagat-gCGTGGTGTGGGGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180823 55 + 62195757 gagtgtagaca-tacgtgatatggagtcatgtgagtgtagat-gCGTGGTGTGGGGT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566917 55 - 578057 gagtgtagaca-TACGTGATATGGGGTCATGTGAGTGTAGAT-GCGTGGTGTGGGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089113 55 - 110113093 gagtatagaca-TACGTGATATGGGATCATGTGAGTGTAGAT-ACGTGGTGTGGGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828551 55 - 92844088 gagtctagaca-TACGTGATACTGGATCATGTGAGTGTAGAT-GCGTGGTGTGGGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494219 55 + 96509753 gagtctagaca-TACGTGATACTGGATCATGTGCGTGTAGAT-GCGTGGTGTGGGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964185 55 - 16982598 gagtctagaca-TACGTGATACTGGATCATGTGAGTGTAGAT-GCGTGGTGTGGGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766138 55 - 3785965 gagtctagaca-TACGTGATACTGGATCATGTGAGTGTAGAT-GCGTGGTGTGGGGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356119 55 - 90373283 gagtctagaca-tacgtgatactggattatgtgagtgtagat-gCGTGGTGTGGGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156896 55 - 179258 gagtctagaca-TACGTGATACTGGATCATGTGAGTGTAGAT-GCGTGGTGTAGGGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626412 55 - 5823884 gagtatagaca-TACGTGATACTGGATCATGTGAGTGTAGAT-GCATGGTGTGGGGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184507 55 + 159171411 gagtgtagaca-TACATGATATGGGATCATGTGAGTGTAGAT-GCGTGGGGTGGGGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347322 55 + 16356641 gagtgtagaca-CACACGATACGGGATCACGTGAGTGTAGAT-GCATGGGGTACGTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221106 56 + 1231380 gagtgtagaca-tacatgctatgggatgatgtgagtgtagatggCGTGGGGTGGGGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2747556 55 + 11732439 GAGTGTAGACA-TACACGATACGGGGTCATGTGAGTGTAGAT-GCATGGGGTGGGGT i aotNan1.NW_018500483v1 I 186 C 0 s otoGar3.GL873542 22922553 54 + 22939663 GAGTGAAGATAGCTCATAGTA--AGGCCATGTGAGTGTAGAC-CCATGCGGTGGGGT i otoGar3.GL873542 C 0 I 166 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=278474.000000 s hg38.chr20_KI270870v1_alt 178248 32 + 183433 GTG-TAAGTTTAGACCTGCACAATATGGGGTC--A s panTro5.chr20 66513663 33 + 66533130 GTGTTAAGTTTAGACCTGCACAATATGGGGTC--A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180878 33 + 62195757 GTGTTAAGTTTAGACCTGCACAATATGGGGTC--A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 566972 32 - 578057 GTG-TAAGTTTAGACCGGCACAATATGGGGTC--A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089168 32 - 110113093 GTG-TACGTTTAGACCTGCACGATATGGGGTC--A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828606 32 - 92844088 GTG-TAAGTTTAGACCTGCATGATATGGGGTC--A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494274 32 + 96509753 GTG-TAAGTTTAGACCTGCATGATATGGGGTC--A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964240 32 - 16982598 GTG-TAAGTTTAGACCTGCATGATATGGGGTC--A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766193 32 - 3785965 GTG-TAAGTTTAGACCTGCATGATATGGGGTC--A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356174 32 - 90373283 GTG-TAAGTTTAGACCTGCATGATATGGGGTC--A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 156951 32 - 179258 GTG-TAAGTTTAGACCTGCATGATATGGGGTC--A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626467 32 - 5823884 GTG-TAAGTTTAGACCTGCATGATACGGGGTC--A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184562 31 + 159171411 GTG-TAAGTTTAGACCTGCAtgatatagggtc--- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347377 31 + 16356641 GTG-TACGTTTAGACCTGCATGATACAGGGTC--- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221162 32 + 1231380 GTG-TAAGTTTAGACCTGCACGATACAGGGTCA-- i cebCap1.NW_016107870v1 C 0 I 186 s aotNan1.NW_018500483v1 2747611 32 + 11732439 GTG-TAAGTTTAGACCTGCACGATATAAGGTC-A- i aotNan1.NW_018500483v1 C 0 I 514 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=-23466.000000 s hg38.chr20_KI270870v1_alt 178280 5 + 183433 A--------AGTG s panTro5.chr20 66513696 5 + 66533130 A--------AGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180911 5 + 62195757 A--------AGTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567004 5 - 578057 A--------AGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089200 5 - 110113093 G--------AGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828638 1 - 92844088 G------------ i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494306 1 + 96509753 G------------ i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964272 1 - 16982598 G------------ i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766225 1 - 3785965 G------------ i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356206 5 - 90373283 GAGTG-------- i chlSab2.chr2 C 0 I 141 s manLeu1.NW_012101652v1 156983 1 - 179258 G------------ i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626499 5 - 5823884 G----AGTG---- i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e saiBol1.JH378156 16347408 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184593 0 + 159171411 C e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=71622.000000 s hg38.chr20_KI270870v1_alt 178285 41 + 183433 AGTGTAGACGTGTGTGGTGTGGGGTCGTGAGAGTGCGGACA s panTro5.chr20 66513701 41 + 66533130 AGTGTAGACGTGTGTGGTGTGGGGTCGTGAGAGTGCGGACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180916 41 + 62195757 AGTGTAGACGTGTGTGGTGTGGGGTCGTGAGAGTGCGGACA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567009 41 - 578057 AGTGTAGACGTGTGTGGTGTGGGGTCGTGAGAGTGCGGACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089205 41 - 110113093 AGTGTAGACGTGTGTGGTGTGGGGTCGTGAGAGTGCGGACG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828639 10 - 92844088 -------------------------------AGCGTAGACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494307 10 + 96509753 -------------------------------AGCGTAGACG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964273 10 - 16982598 -------------------------------AGCGTAGACG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766226 10 - 3785965 -------------------------------AGCGTAGACG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 156984 10 - 179258 -------------------------------AGCGTAGACG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626504 41 - 5823884 AGTGTAGACGTGCGTGATGTGGGGTCATGAGAGTGTGGACG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184593 30 + 159171411 -----------gtgtggtgtggggtcgtgtgagtgtggaaa i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347408 30 + 16356641 -----------ATGTGGTGTGGGGTCGTGTGAGTGCGGAAA i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e chlSab2.chr2 90356211 141 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=308944.000000 s hg38.chr20_KI270870v1_alt 178326 71 + 183433 TGCGCAATGTGGGGTCAT--GTGTGGACATTTGCAGTGTGGGGTAATGTGTGTGTGGGTGTGCGCGGTGTGGG s panTro5.chr20 66513742 68 + 66533130 TGCGCAATGTGGGGTCAT--GTGTGGACATTTGCAGTGTGGGGTAAT---TGTGTGGGTGTGCGTGGTGTGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62180957 56 + 62195757 TGCGCAATGTGGGGTCAT--GTGTGGACATTTGCAGTGTGGGGTAAT---TGTGTGGGTGT------------ i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567050 69 - 578057 TGCGCAATGTGGGGTCAT--GTGTGGACATTTGCAGTGTGGGGTAAT--GTGTGTGGGTGTGCGTGGTGTGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089246 71 - 110113093 TGCGCACTGTGGGGTCAT--GTGTGGACATTTGCAGTGTGGGGTAATGTGTGTGTGGGTGTGCGCGGTGTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828649 73 - 92844088 TGCACAATGAGGGGTCATGAGTGTGGACATTTGCAGTGTGCGGTCACGTGTGTGTGGGTGTGCGTGGTGTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494317 73 + 96509753 TGCACAATGAGGGGTCATGAGTGTGGACATTTGCAGTGTGCGGTCACGTGTGTGTGGGTGTGCGTGGTGTGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964283 73 - 16982598 TGCACAATGAGGGGTCATGAGTGTGGACATTTGCAGTGTGCGGTCACGTGTGTGTGGGTGTGCGTGGTGTGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766236 73 - 3785965 TGCACAATGAGGGGTCATGAGTGTGGACATTTGCAGTGTGCGGTCACGTGTGTGTGGGTGTGCGTGGTGTGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 156994 73 - 179258 TGCACAATGAGGGGTCATGAGTGTGGACATTTGCAGTGTGCGGTCACGTGTGTGTGGGTGTGCGTGGTGTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626545 73 - 5823884 TGCACAATGAGGGGTCATGAGTGCGGACATTTGCAGTGTGTGGTCACGTGTGTGTGGGTGTGCGTGGTGTGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184623 42 + 159171411 -------------------------------tgcagtgtggggtcatgtgagtgtagatgtgtgtggcgtgAG i calJac3.chr5 C 0 I 137 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e chlSab2.chr2 90356211 141 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=120489.000000 s hg38.chr20_KI270870v1_alt 178397 32 + 183433 GTCATGTGAATGTGGGCACGCGTGGTGTGGGG s panTro5.chr20 66513810 32 + 66533130 GTCATGTGAGTGTGGGCACGCGTGGTGTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181013 13 + 62195757 -------------------GCGTGGTGTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567119 32 - 578057 GTCATGTGAGTGTGGGCACGCGTGGTGTGGGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089317 27 - 110113093 GTCACG----TGTGGGTACGCGTGGTGTGCG- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828722 32 - 92844088 GTCGTGTGAGTGTGGGCACGCATGGTGTGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494390 32 + 96509753 GTCGTGTGAGTGTGGGCACGCATGGTGTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964356 32 - 16982598 GTCGTGTGAGTGTGGGCACGCATGGTGTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766309 32 - 3785965 GTCGTGTGAGTGTGGGCACGCATGGTGTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s manLeu1.NW_012101652v1 157067 32 - 179258 GTCGTGTGAGTGTGGGCACGCATGGTGTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626618 32 - 5823884 GTCGTGTGAGTGTGGGCACGCGTGGTGTGGGG i colAng1.NW_012114444v1 C 0 I 55 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e chlSab2.chr2 90356211 141 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=3276.000000 s hg38.chr20_KI270870v1_alt 178429 1 + 183433 T s panTro5.chr20 66513842 1 + 66533130 T i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181026 1 + 62195757 T i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567151 1 - 578057 T i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92828754 1 - 92844088 T i rheMac8.chr10 C 0 I 21 s macFas5.chr10 96494422 1 + 96509753 T i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964388 1 - 16982598 T i macNem1.NW_012014244v1 C 0 I 19 s cerAty1.NW_012001373v1 3766341 1 - 3785965 T i cerAty1.NW_012001373v1 C 0 I 19 s manLeu1.NW_012101652v1 157099 1 - 179258 T i manLeu1.NW_012101652v1 C 0 I 36 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e chlSab2.chr2 90356211 141 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e nomLeu3.chr13 110089344 0 - 110113093 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=3065.000000 s hg38.chr20_KI270870v1_alt 178430 22 + 183433 CATGGGTGCTGGCGTGTGGG----------GG s panTro5.chr20 66513843 24 + 66533130 CATGGGTGCTGGCGTGTGCGG--------TGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181027 24 + 62195757 CATGGGTGCTGGCGTGTGCGG--------TGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567152 32 - 578057 CATGGGTGCTGGTGTGCGCGGTGTGGGGTTGT i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96494423 7 + 96509753 GATGAGA------------------------- i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766342 19 - 3785965 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e chlSab2.chr2 90356211 141 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e manLeu1.NW_012101652v1 157100 36 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964389 19 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e nomLeu3.chr13 110089344 0 - 110113093 C e rheMac8.chr10 92828755 21 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=27323.000000 s hg38.chr20_KI270870v1_alt 178452 37 + 183433 GTGTGGGCGTGCATCGTGTGGGGTCGTGTGAGTGCGG s panTro5.chr20 66513867 34 + 66533130 GGGTGGGCGTGCATCGTGTGGG---GTGAGGGTGCGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181051 34 + 62195757 GT---GGCGTGCATCGTGTGGGGTCGTGAGGGTGCGG i panPan2.chr20 C 0 I 109 s gorGor5.CYUI01015848v1 567184 37 - 578057 GTGTGGGTGTGCATCGTGTGGGGTTGTGTGAGTGCGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089344 22 - 110113093 ---------------GTGTGGGGTCCTGTGAGTGCGG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96494430 35 + 96509753 GTGTGAGAATGTATGGTGTGGGGTCGTGAGCGTGG-- i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 157136 25 - 179258 GTGTGGGCGTGCATGGTGTGGGGTC------------ i manLeu1.NW_012101652v1 I 36 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766342 19 - 3785965 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e chlSab2.chr2 90356211 141 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964389 19 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92828755 21 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=9621.000000 s hg38.chr20_KI270870v1_alt 178489 16 + 183433 GCATGCATGGTGTGTG s panTro5.chr20 66513901 16 + 66533130 ACGTGCATGGTGTGCG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567221 16 - 578057 GCATGCATGGTGTGCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089366 16 - 110113093 GCGTGCATGATGTGGG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96494465 13 + 96509753 GCGTGCATGGTGT--- i macFas5.chr10 C 0 I 1 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766342 19 - 3785965 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e chlSab2.chr2 90356211 141 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157161 0 - 179258 C e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964389 19 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92828755 21 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=1542.000000 s hg38.chr20_KI270870v1_alt 178505 9 + 183433 GTGTGAGTG s panTro5.chr20 66513917 9 + 66533130 GTGTGAGTG i panTro5.chr20 C 0 I 2027 s gorGor5.CYUI01015848v1 567237 9 - 578057 GTGTGAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089382 2 - 110113093 GT------- i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96494479 4 + 96509753 GGGT----- i macFas5.chr10 I 1 C 0 s chlSab2.chr2 90356352 9 - 90373283 GTGTGAGTG i chlSab2.chr2 I 141 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766342 19 - 3785965 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157161 0 - 179258 C e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964389 19 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92828755 21 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=1703.000000 s hg38.chr20_KI270870v1_alt 178514 9 + 183433 TGGTCCTGC s gorGor5.CYUI01015848v1 567246 9 - 578057 TGGTCCTGC i gorGor5.CYUI01015848v1 C 0 C 0 s chlSab2.chr2 90356361 9 - 90373283 CAGGCCTGC i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766342 19 - 3785965 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157161 0 - 179258 C e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964389 19 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66513926 2027 + 66533130 I e nomLeu3.chr13 110089384 0 - 110113093 C e rheMac8.chr10 92828755 21 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I e macFas5.chr10 96494483 0 + 96509753 C a score=14961.000000 s hg38.chr20_KI270870v1_alt 178523 27 + 183433 ACGGTGTGGGGTCCCGTGAGTGAGGGC s gorGor5.CYUI01015848v1 567255 27 - 578057 ACGGTGTGGGGTCCCGTGAGTGCGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089384 11 - 110113093 ----------------TGTGTGTGGGC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96494483 13 + 96509753 --------------CATGGGTGCAGGC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3766361 25 - 3785965 ACGGTGTGGGGT--CGTGAGTGTGGGC i cerAty1.NW_012001373v1 I 19 C 0 s chlSab2.chr2 90356370 27 - 90373283 GCGGTGCGGGGTTGTGTGAGTGCGGGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157161 12 - 179258 ---------------ATGGGTGCAGGC i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964389 19 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66513926 2027 + 66533130 I e rheMac8.chr10 92828755 21 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=10948.000000 s hg38.chr20_KI270870v1_alt 178550 4 + 183433 GTGC s panTro5.chr20 66515953 4 + 66533130 GTGC i panTro5.chr20 I 2027 C 0 s gorGor5.CYUI01015848v1 567282 4 - 578057 GTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089395 4 - 110113093 GTGC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96494496 4 + 96509753 GTGC i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3766386 4 - 3785965 GTGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356397 4 - 90373283 GTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157173 4 - 179258 GTGC i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964389 19 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92828755 21 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=4057.000000 s hg38.chr20_KI270870v1_alt 178554 2 + 183433 AC s panTro5.chr20 66515957 2 + 66533130 AC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567286 2 - 578057 AT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089399 2 - 110113093 AC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96494500 2 + 96509753 AC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964408 2 - 16982598 AC i macNem1.NW_012014244v1 I 19 C 0 s cerAty1.NW_012001373v1 3766390 2 - 3785965 AT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356401 2 - 90373283 GC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157177 2 - 179258 AC i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92828755 21 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=40867.000000 s hg38.chr20_KI270870v1_alt 178556 11 + 183433 GGTGTGGGGTC s panTro5.chr20 66515959 11 + 66533130 GGTGTGGGGTC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567288 11 - 578057 GGTGTGGGGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089401 11 - 110113093 GGTGTGGGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828776 11 - 92844088 GGTGTGGGGTC i rheMac8.chr10 I 21 C 0 s macFas5.chr10 96494502 11 + 96509753 GGTGCAGGGTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964410 11 - 16982598 GGTGTGGGGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766392 11 - 3785965 GGTGTGGGGTC i cerAty1.NW_012001373v1 C 0 I 38 s chlSab2.chr2 90356403 11 - 90373283 GGTGCGGGGTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157179 11 - 179258 GGTGCAGGGTT i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=4195.000000 s hg38.chr20_KI270870v1_alt 178567 11 + 183433 CTGTGAGT--GCG s panTro5.chr20 66515970 11 + 66533130 GTGTGAAT--GCG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567299 11 - 578057 CTGTGAGT--GCG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089412 9 - 110113093 CTGTGAGT----G i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828787 9 - 92844088 GTGAGCGT--G-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494513 9 + 96509753 GTGTGAGT--G-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964421 9 - 16982598 GTGAGTGT--G-- i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90356414 11 - 90373283 GTGTGAGTGCG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157190 9 - 179258 GTGTGAGT--G-- i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766403 38 - 3785965 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=75559.000000 s hg38.chr20_KI270870v1_alt 178578 26 + 183433 GGTGTGCACGGTGTGGGGT--C--GTAAGT s panTro5.chr20 66515981 26 + 66533130 GGCCTGCACGGTGTGGGGT--C--GTGAGT i panTro5.chr20 C 0 I 43 s gorGor5.CYUI01015848v1 567310 26 - 578057 GGCGTGCACGGTGTGGGAT--T--GTGAGG i gorGor5.CYUI01015848v1 C 0 I 27 s nomLeu3.chr13 110089421 28 - 110113093 GGTACGCGTGATGTGGGGT--CATGTGAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828796 26 - 92844088 GGCGTGCATGGTGTTGGGT--C--ATGGGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494522 26 + 96509753 GGCGTGCACGGTGTGGGGT--C--ATGGGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964430 26 - 16982598 GGCGTGCATGGTGTTGGGT--C--ATGGGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766441 26 - 3785965 GGCGTGCACGGTGTGGGGT--C--ATGGGT i cerAty1.NW_012001373v1 I 38 C 0 s chlSab2.chr2 90356425 28 - 90373283 GGCGTGCGCGGTGCGGGGTTGT--GTGAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157199 26 - 179258 GGCGTGCGCGGTGTGGGGT--C--ATGGGT i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=595.000000 s hg38.chr20_KI270870v1_alt 178604 1 + 183433 T s gorGor5.CYUI01015848v1 567363 1 - 578057 G i gorGor5.CYUI01015848v1 I 27 C 0 s nomLeu3.chr13 110089449 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828822 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494548 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964456 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766467 1 - 3785965 G i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356453 1 - 90373283 G i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157225 1 - 179258 G i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626650 55 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516007 43 + 66533130 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=50038.000000 s hg38.chr20_KI270870v1_alt 178605 27 + 183433 CAGGCGTGCACGGTATGGGGTTGTGTG s gorGor5.CYUI01015848v1 567364 27 - 578057 AGGGCGTGCATGGTGTGGGGTCGTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089450 27 - 110113093 CGGGCGTGCGCGGTGTGGGGTCGTGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828823 27 - 92844088 CAGGCGTGCACGGTGCAGGGTTGTGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494549 27 + 96509753 CAGGCGTGCGCGGTGCGGGGTTGTGTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964457 27 - 16982598 CAGGCGTGCACGGTGCAGGGTTGTGTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766468 23 - 3785965 CAGGCGTGCGCGGTGCGGGGTTG---- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356454 8 - 90373283 CGGGCCTG------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157226 8 - 179258 CAGGCGTG------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626705 27 - 5823884 CAGGCGTGCGCGGTGCGGGGTTGTGTG i colAng1.NW_012114444v1 I 55 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516007 43 + 66533130 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=-2364.000000 s hg38.chr20_KI270870v1_alt 178632 4 + 183433 AGTG--- s gorGor5.CYUI01015848v1 567391 4 - 578057 AGTG--- i gorGor5.CYUI01015848v1 C 0 I 8 s nomLeu3.chr13 110089477 4 - 110113093 AGCG--- i nomLeu3.chr13 C 0 T 77 s rheMac8.chr10 92828850 4 - 92844088 ---AGTG i rheMac8.chr10 C 0 I 50 s macFas5.chr10 96494576 1 + 96509753 ---A--- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964484 1 - 16982598 ---A--- i macNem1.NW_012014244v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766491 0 - 3785965 C e colAng1.NW_012114444v1 5626732 0 - 5823884 C e chlSab2.chr2 90356462 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157234 0 - 179258 C e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516007 43 + 66533130 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=1357.000000 s hg38.chr20_KI270870v1_alt 178636 6 + 183433 CATGGC s gorGor5.CYUI01015848v1 567403 6 - 578057 CGTGAG i gorGor5.CYUI01015848v1 I 8 C 0 s chlSab2.chr2 90356462 6 - 90373283 CGCGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157234 6 - 179258 CGCGGT i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766491 0 - 3785965 C e colAng1.NW_012114444v1 5626732 0 - 5823884 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964485 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516007 43 + 66533130 I e nomLeu3.chr13 110089481 77 - 110113093 T e rheMac8.chr10 92828854 50 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I e macFas5.chr10 96494577 0 + 96509753 C a score=8273.000000 s hg38.chr20_KI270870v1_alt 178642 9 + 183433 GTGGGGTCT s panTro5.chr20 66516050 9 + 66533130 GTGAGGTCG i panTro5.chr20 I 43 C 0 s gorGor5.CYUI01015848v1 567409 9 - 578057 GTGGGGTCA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089404 9 - 110113093 GTGGGGTCC i nomLeu3.chr13 T 77 C 0 s chlSab2.chr2 90356468 9 - 90373283 GCGGGGTTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157240 9 - 179258 GCGGGGTTG i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766491 0 - 3785965 C e colAng1.NW_012114444v1 5626732 0 - 5823884 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964485 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92828854 50 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I e macFas5.chr10 96494577 0 + 96509753 C a score=165203.000000 s hg38.chr20_KI270870v1_alt 178651 58 + 183433 TGTGAGTGCGGGCGTGCACGGTGTGGGGT--C--TTGAGTTCAGGCGTGCACGGTATGGGGT s panTro5.chr20 66516059 58 + 66533130 TGTGAATGCGGGCGTGCACAGTGTGGAGT--C--GTGAGTTCGGGCGTGCACGGTGTGGGGT i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567418 58 - 578057 TGTGAGTGCGGGTGTGCACAGTGTGGGGT--C--GTGAGTTCAGGCGTGCATGGTACGGGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089413 58 - 110113093 TGTGAGT--GGGTACGCGTGATGTGGGGT--CATGTGAGTTCGGGCGTGCGCGGTGTGGGGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828904 58 - 92844088 TGTGAGTGTGGGCGTTCACGGTGTGGGGT--C--GTGACTTGAGGTGTGCACGGTGTGGGGT i rheMac8.chr10 I 50 I 10 s macFas5.chr10 96494577 53 + 96509753 -----GTGTGGGCGTTCATGGTGTGGGGT--C--GTGACTTGAGGTGTGCACGGTGTGGGGT i macFas5.chr10 C 0 I 10 s macNem1.NW_012014244v1 16964485 51 - 16982598 -------GTGGGCGTGCACGGTGTGGGGT--C--ATGGGTGCAGGCGTGCGCGGTGCGGGGT i macNem1.NW_012014244v1 C 0 I 1 s cerAty1.NW_012001373v1 3766491 58 - 3785965 TGTGAGTGTGGGCGTGCATGGTGTGGGGT--C--GTGACTTGAGGTGTGCACGGTGTGAGGT i cerAty1.NW_012001373v1 C 0 I 66 s chlSab2.chr2 90356477 60 - 90373283 TGTGAGTGCGGGCGTGCGCGGTGCGGGGTTGT--GTGAGTGCGGGCGTGCGCGGTGCGGGGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157249 58 - 179258 TGTGAGTGTGGGCGTGCACGGTGTGGGGT--C--ATGGGTGCAGGCGTGTGCTGTGTGGGGT i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626732 0 - 5823884 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=11463.000000 s hg38.chr20_KI270870v1_alt 178709 10 + 183433 CGTGTGAGTG s panTro5.chr20 66516117 10 + 66533130 CGTGTGAGTG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567476 10 - 578057 TGTGTGAGTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089471 10 - 110113093 CGTGTGAGCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828972 6 - 92844088 GGTGTG---- i rheMac8.chr10 I 10 C 0 s macFas5.chr10 96494640 6 + 96509753 GGTGTG---- i macFas5.chr10 I 10 C 0 s chlSab2.chr2 90356537 10 - 90373283 TGTGTGAGTG i chlSab2.chr2 C 0 I 71 s manLeu1.NW_012101652v1 157307 10 - 179258 CGTGTGAGTG i manLeu1.NW_012101652v1 C 0 I 10 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766549 66 - 3785965 I e colAng1.NW_012114444v1 5626732 0 - 5823884 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964536 1 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=13906.000000 s hg38.chr20_KI270870v1_alt 178719 16 + 183433 CATGGTGTGGGG--TCGT s panTro5.chr20 66516127 16 + 66533130 CACGGTGTGGGG--TCGT i panTro5.chr20 C 0 T 189 s gorGor5.CYUI01015848v1 567486 17 - 578057 CGTGGTGTGGGTC-TTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089481 16 - 110113093 CACGGTGTGGGG--TCGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828978 15 - 92844088 CACGGTGTGGG---GTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494646 15 + 96509753 CACGGTGTGGG---GTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964537 4 - 16982598 --------------GTGT i macNem1.NW_012014244v1 I 1 C 0 s chlSab2.chr2 90356618 18 - 90373283 CGTGATGTGGGGTCATGT i chlSab2.chr2 I 71 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766549 66 - 3785965 I e colAng1.NW_012114444v1 5626732 0 - 5823884 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157317 10 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=-138.000000 s hg38.chr20_KI270870v1_alt 178735 1 + 183433 C s gorGor5.CYUI01015848v1 567503 1 - 578057 G i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92828993 1 - 92844088 G i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494661 1 + 96509753 G i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964541 1 - 16982598 G i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90356636 1 - 90373283 A i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766549 66 - 3785965 I e colAng1.NW_012114444v1 5626732 0 - 5823884 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157317 10 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e nomLeu3.chr13 110089497 0 - 110113093 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=19799.000000 s hg38.chr20_KI270870v1_alt 178736 9 + 183433 AGTGCGGGC s gorGor5.CYUI01015848v1 567504 9 - 578057 AGTGCGGGC i gorGor5.CYUI01015848v1 C 0 T 205 s nomLeu3.chr13 110089497 6 - 110113093 ---GAGGGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92828994 9 - 92844088 AGTGCGGGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494662 9 + 96509753 AGTGCGGGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964542 9 - 16982598 AGTGTGGGC i macNem1.NW_012014244v1 C 0 C 0 s chlSab2.chr2 90356637 9 - 90373283 AGTGCGGGC i chlSab2.chr2 C 0 C 0 s colAng1.NW_012114444v1 5626732 9 - 5823884 AGTGCGGGC i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766549 66 - 3785965 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157317 10 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=20321.000000 s hg38.chr20_KI270870v1_alt 178745 18 + 183433 ATGCACGTTGTGGGGTCG s nomLeu3.chr13 110089503 18 - 110113093 GTGCATGGTGTGGGATCG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829003 18 - 92844088 ATGCATGGTATTGGGTCA i rheMac8.chr10 C 0 I 4 s macFas5.chr10 96494671 18 + 96509753 ATGCATGGTATTGGGTCA i macFas5.chr10 C 0 I 4 s macNem1.NW_012014244v1 16964551 17 - 16982598 GTTCACGGTGTGGGGTC- i macNem1.NW_012014244v1 C 0 I 110 s chlSab2.chr2 90356646 18 - 90373283 ACGCACGGCGTGGGGTTG i chlSab2.chr2 C 0 I 6 s colAng1.NW_012114444v1 5626741 18 - 5823884 GTGCACGGTGTGGGGTCG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766549 66 - 3785965 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e gorGor5.CYUI01015848v1 567513 205 - 578057 T e manLeu1.NW_012101652v1 157317 10 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=191.000000 s hg38.chr20_KI270870v1_alt 178763 2 + 183433 TG s nomLeu3.chr13 110089521 2 - 110113093 TG i nomLeu3.chr13 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766549 66 - 3785965 I e colAng1.NW_012114444v1 5626759 0 - 5823884 C e chlSab2.chr2 90356664 6 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e gorGor5.CYUI01015848v1 567513 205 - 578057 T e manLeu1.NW_012101652v1 157317 10 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964568 110 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e rheMac8.chr10 92829021 4 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I e macFas5.chr10 96494689 4 + 96509753 I a score=5739.000000 s hg38.chr20_KI270870v1_alt 178765 8 + 183433 TG------GGTGTG s gorGor5.CYUI01015848v1 567308 8 - 578057 CG------GGCGTG i gorGor5.CYUI01015848v1 T 205 C 0 s nomLeu3.chr13 110089523 8 - 110113093 TG------AGTGTG i nomLeu3.chr13 C 0 T 50 s rheMac8.chr10 92829025 6 - 92844088 --------AGTGGG i rheMac8.chr10 I 4 C 0 s macFas5.chr10 96494693 6 + 96509753 --------AGTGGG i macFas5.chr10 I 4 C 0 s cerAty1.NW_012001373v1 3766615 6 - 3785965 --------TGTGGG i cerAty1.NW_012001373v1 I 66 C 0 s chlSab2.chr2 90356670 6 - 90373283 --------TGTGGG i chlSab2.chr2 I 6 C 0 s colAng1.NW_012114444v1 5626759 14 - 5823884 TGACTTGAGGTGTG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157317 10 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964568 110 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=7185.000000 s hg38.chr20_KI270870v1_alt 178773 4 + 183433 CACG s gorGor5.CYUI01015848v1 567316 4 - 578057 CACG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089481 4 - 110113093 CACG i nomLeu3.chr13 T 50 C 0 s rheMac8.chr10 92829031 4 - 92844088 CACA i rheMac8.chr10 C 0 I 4 s macFas5.chr10 96494699 4 + 96509753 CACA i macFas5.chr10 C 0 I 4 s cerAty1.NW_012001373v1 3766621 4 - 3785965 CGTG i cerAty1.NW_012001373v1 C 0 I 4 s chlSab2.chr2 90356676 4 - 90373283 CACA i chlSab2.chr2 C 0 I 4 s colAng1.NW_012114444v1 5626773 4 - 5823884 CACG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157317 10 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964568 110 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=27836.000000 s hg38.chr20_KI270870v1_alt 178777 10 + 183433 GTGTGGGGTC s gorGor5.CYUI01015848v1 567320 10 - 578057 GTGTGGGATT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089485 10 - 110113093 GTGTGGGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829039 10 - 92844088 ATGTGGGGTT i rheMac8.chr10 I 4 C 0 s macFas5.chr10 96494707 10 + 96509753 ATGTGGGGTT i macFas5.chr10 I 4 C 0 s cerAty1.NW_012001373v1 3766629 10 - 3785965 GTGTGGGGTC i cerAty1.NW_012001373v1 I 4 C 0 s chlSab2.chr2 90356684 10 - 90373283 ATGTGGGGTC i chlSab2.chr2 I 4 C 0 s manLeu1.NW_012101652v1 157327 10 - 179258 CTGTGGGGTC i manLeu1.NW_012101652v1 I 10 C 0 s colAng1.NW_012114444v1 5626777 10 - 5823884 GTGTGGGGTC i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964568 110 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=39783.000000 s hg38.chr20_KI270870v1_alt 178787 16 + 183433 GTGAG--TGCGGGCGTGC s gorGor5.CYUI01015848v1 567330 18 - 578057 GTGAGGGTGCGGGCGTGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089495 9 - 110113093 GTGAG------GGCG--- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829049 16 - 92844088 GTGAG--TGTGGGCGTGC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494717 16 + 96509753 GTGAG--TGTGGGCGTGC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964678 16 - 16982598 GTGAG--TGTGGGCGTGC i macNem1.NW_012014244v1 I 110 C 0 s cerAty1.NW_012001373v1 3766639 16 - 3785965 ATGGG--TGCAGGCGTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356694 16 - 90373283 TTGAG--TGTGGGCGTGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157337 16 - 179258 ATGAG--TGCGGGCGTGC i manLeu1.NW_012101652v1 C 0 I 54 s colAng1.NW_012114444v1 5626787 16 - 5823884 GTGAG--TGCGGGCATGC i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=17391.000000 s hg38.chr20_KI270870v1_alt 178803 16 + 183433 GTGGTGCGGGGTCATG s gorGor5.CYUI01015848v1 567348 14 - 578057 GTGATGTGGGGT--TG i gorGor5.CYUI01015848v1 C 0 C 0 s rheMac8.chr10 92829065 16 - 92844088 GTGGTGTGGGGTCATG i rheMac8.chr10 C 0 I 123 s macFas5.chr10 96494733 16 + 96509753 GTGGTGTGGGGTCATG i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16964694 16 - 16982598 GTGGTGTGGGGTCATG i macNem1.NW_012014244v1 C 0 I 2 s cerAty1.NW_012001373v1 3766655 3 - 3785965 GCT------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356710 16 - 90373283 ATGGTGTGGGGTCATG i chlSab2.chr2 C 0 I 47 s colAng1.NW_012114444v1 5626803 16 - 5823884 ACGGTGTTGGGTCATG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157353 54 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e nomLeu3.chr13 110089504 0 - 110113093 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=1599.000000 s hg38.chr20_KI270870v1_alt 178819 3 + 183433 TGA s gorGor5.CYUI01015848v1 567362 3 - 578057 TGA i gorGor5.CYUI01015848v1 C 0 I 148 s macFas5.chr10 96494751 3 + 96509753 TGC i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16964712 3 - 16982598 TGC i macNem1.NW_012014244v1 I 2 C 0 s colAng1.NW_012114444v1 5626819 3 - 5823884 TGA i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766658 0 - 3785965 C e chlSab2.chr2 90356726 47 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157353 54 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e nomLeu3.chr13 110089504 0 - 110113093 C e rheMac8.chr10 92829081 123 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=205.000000 s hg38.chr20_KI270870v1_alt 178822 1 + 183433 G s gorGor5.CYUI01015848v1 567513 1 - 578057 G i gorGor5.CYUI01015848v1 I 148 C 0 s macFas5.chr10 96494754 1 + 96509753 A i macFas5.chr10 C 0 I 2 s macNem1.NW_012014244v1 16964715 1 - 16982598 A i macNem1.NW_012014244v1 C 0 I 2 s colAng1.NW_012114444v1 5626822 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766658 0 - 3785965 C e chlSab2.chr2 90356726 47 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157353 54 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e nomLeu3.chr13 110089504 0 - 110113093 C e rheMac8.chr10 92829081 123 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=4701.000000 s hg38.chr20_KI270870v1_alt 178823 3 + 183433 TGC s gorGor5.CYUI01015848v1 567514 3 - 578057 TGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089504 3 - 110113093 TGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829204 3 - 92844088 TGC i rheMac8.chr10 I 123 C 0 s macFas5.chr10 96494757 3 + 96509753 CGT i macFas5.chr10 I 2 C 0 s macNem1.NW_012014244v1 16964718 3 - 16982598 CGT i macNem1.NW_012014244v1 I 2 C 0 s manLeu1.NW_012101652v1 157407 3 - 179258 TGC i manLeu1.NW_012101652v1 I 54 C 0 s colAng1.NW_012114444v1 5626823 3 - 5823884 TGC i colAng1.NW_012114444v1 C 0 I 12 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766658 0 - 3785965 C e chlSab2.chr2 90356726 47 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=3274.000000 s hg38.chr20_KI270870v1_alt 178826 3 + 183433 ACG s gorGor5.CYUI01015848v1 567517 3 - 578057 ACG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089507 3 - 110113093 ATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829207 3 - 92844088 ACG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494760 3 + 96509753 GTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964721 3 - 16982598 GTG i macNem1.NW_012014244v1 C 0 C 0 s manLeu1.NW_012101652v1 157410 3 - 179258 ATG i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766658 0 - 3785965 C e colAng1.NW_012114444v1 5626826 12 - 5823884 I e chlSab2.chr2 90356726 47 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=106390.000000 s hg38.chr20_KI270870v1_alt 178829 41 + 183433 GTGTGGGGTCGTGTGAGTGTGGGCACGTGTGATGTGGGGTC s gorGor5.CYUI01015848v1 567520 38 - 578057 GTGTGGGGTCGTGTGAGTGTGGGCACGTGTGATG---GGTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089510 41 - 110113093 GTGTGGGATCGTGTGAGTGTGGGCACGCGTGATGTGGGGTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829210 41 - 92844088 GCGTGGGGTCGTCTGAGTGCGGGCACGCGTGATGTGGGGTC i rheMac8.chr10 C 0 I 34 s macFas5.chr10 96494763 39 + 96509753 CTGTGGGGTCATGTGAGTGTGGG--CGTGTGCTGTGGGGTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964724 39 - 16982598 CTGTGGGGTCGTGTGAGTGTGGG--CGTGTGCTGTGGGGTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766658 39 - 3785965 GTGTGGGGTCGTGTGAGTGTGGG--CGTGTGCTGTGGGGTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356773 39 - 90373283 GTGTGGGGTCGTGTGAGTGTGGG--CGTGTGCTGTGGGGTC i chlSab2.chr2 I 47 C 0 s manLeu1.NW_012101652v1 157413 41 - 179258 GCGTGGGGTCGTGTGAGTGTGGGCACGCGTGATGTGGGGTC i manLeu1.NW_012101652v1 C 0 I 34 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=1911.000000 s hg38.chr20_KI270870v1_alt 178870 1 + 183433 A s gorGor5.CYUI01015848v1 567558 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089551 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96494802 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964763 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3766697 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356812 1 - 90373283 A i chlSab2.chr2 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157454 34 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e rheMac8.chr10 92829251 34 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=2865.000000 s hg38.chr20_KI270870v1_alt 178871 2 + 183433 TG s gorGor5.CYUI01015848v1 567559 2 - 578057 TG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089552 2 - 110113093 TG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96494803 2 + 96509753 TG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964764 2 - 16982598 TG i macNem1.NW_012014244v1 C 0 I 55 s cerAty1.NW_012001373v1 3766698 2 - 3785965 TG i cerAty1.NW_012001373v1 C 0 I 2 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157454 34 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e rheMac8.chr10 92829251 34 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=24365.000000 s hg38.chr20_KI270870v1_alt 178873 38 + 183433 TGAGTGCGGATGTGCACAGTGTGGGATCGTGTGAGTGC s gorGor5.CYUI01015848v1 567561 38 - 578057 TGAGTGCGGATGTGCACAGTGTGGGATCGTGTGAGTGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089554 38 - 110113093 TGAGTGCAGATGTGCACGGTGTGGGGTCGTGTGAGTGC i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96494805 32 + 96509753 --AGTGCGGGCGTGCACGGTGTGAG---GTGTGAGTG- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16964821 38 - 16982598 TAAGTGCGGGCATGCACGGCGTGGGGTCGTCTGAGTGC i macNem1.NW_012014244v1 I 55 I 175 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157454 34 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e rheMac8.chr10 92829251 34 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=340.000000 s hg38.chr20_KI270870v1_alt 178911 3 + 183433 ACA s gorGor5.CYUI01015848v1 567599 3 - 578057 ATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089592 3 - 110113093 ACA i nomLeu3.chr13 C 0 T 111 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157454 34 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e rheMac8.chr10 92829251 34 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I e macFas5.chr10 96494837 0 + 96509753 C a score=1906.000000 s hg38.chr20_KI270870v1_alt 178914 21 + 183433 GTGGGTTGTGTGGACGTGCAC s gorGor5.CYUI01015848v1 567602 21 - 578057 GTGGGTCGTGTGGACGTGCAC i gorGor5.CYUI01015848v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157454 34 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e nomLeu3.chr13 110089595 111 - 110113093 T e rheMac8.chr10 92829251 34 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I e macFas5.chr10 96494837 0 + 96509753 C a score=1421.000000 s hg38.chr20_KI270870v1_alt 178935 22 + 183433 GGTGTGGCGTCGTGAGTTCAGG s gorGor5.CYUI01015848v1 567623 19 - 578057 GGTGTGG---CGTGAGTTCAGG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089484 18 - 110113093 GGTGTGGGGTCGTGAG----GG i nomLeu3.chr13 T 111 C 0 s macFas5.chr10 96494837 2 + 96509753 --------------------GG i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157454 34 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e rheMac8.chr10 92829251 34 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=1243.000000 s hg38.chr20_KI270870v1_alt 178957 2 + 183433 CA s gorGor5.CYUI01015848v1 567642 2 - 578057 CG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089502 2 - 110113093 CG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829285 2 - 92844088 CA i rheMac8.chr10 I 34 C 0 s macFas5.chr10 96494839 2 + 96509753 TA i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 157488 2 - 179258 CA i manLeu1.NW_012101652v1 I 34 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516143 189 + 66533130 T e otoGar3.GL873542 22922607 166 + 22939663 I a score=6558.000000 s hg38.chr20_KI270870v1_alt 178959 4 + 183433 TGCA s panTro5.chr20 66515954 4 + 66533130 TGCA i panTro5.chr20 T 189 C 0 s gorGor5.CYUI01015848v1 567644 4 - 578057 TGCA i gorGor5.CYUI01015848v1 C 0 I 111 s nomLeu3.chr13 110089504 4 - 110113093 TGCA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829287 4 - 92844088 TGCA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494841 4 + 96509753 CGCG i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 157490 4 - 179258 TGCA i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=1947.000000 s hg38.chr20_KI270870v1_alt 178963 3 + 183433 GGG s panTro5.chr20 66515958 3 + 66533130 CGG i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 110089508 3 - 110113093 TGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829291 3 - 92844088 CGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494845 3 + 96509753 TGA i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 157494 3 - 179258 CGG i manLeu1.NW_012101652v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e colAng1.NW_012114444v1 5626826 12 - 5823884 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e gorGor5.CYUI01015848v1 567648 111 - 578057 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=12222.000000 s hg38.chr20_KI270870v1_alt 178966 6 + 183433 TGTGGG s panTro5.chr20 66515961 6 + 66533130 TGTGGG i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 110089511 6 - 110113093 TGTGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829294 6 - 92844088 TGTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494848 6 + 96509753 TGTGGG i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 157497 6 - 179258 TGTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626838 6 - 5823884 TGTGGG i colAng1.NW_012114444v1 I 12 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e gorGor5.CYUI01015848v1 567648 111 - 578057 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=12944.000000 s hg38.chr20_KI270870v1_alt 178972 6 + 183433 GTCGTG s panTro5.chr20 66515967 6 + 66533130 GTCGTG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567759 6 - 578057 GTCATG i gorGor5.CYUI01015848v1 I 111 C 0 s nomLeu3.chr13 110089517 6 - 110113093 ATCGTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829300 6 - 92844088 GTCGTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494854 6 + 96509753 GTCACG i macFas5.chr10 C 0 C 0 s manLeu1.NW_012101652v1 157503 6 - 179258 GTCGTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626844 6 - 5823884 GTCGTG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e chlSab2.chr2 90356813 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=6472.000000 s hg38.chr20_KI270870v1_alt 178978 4 + 183433 TGAA s panTro5.chr20 66515973 4 + 66533130 TGAA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567765 4 - 578057 TGAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089523 3 - 110113093 TGA- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829306 4 - 92844088 TGAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494860 4 + 96509753 TAAG i macFas5.chr10 C 0 C 0 s chlSab2.chr2 90356813 4 - 90373283 TGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157509 4 - 179258 TGAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626850 4 - 5823884 TGAG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3766700 2 - 3785965 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=59260.000000 s hg38.chr20_KI270870v1_alt 178982 21 + 183433 TGCGGGCCTGCACGGTGTGGG s panTro5.chr20 66515977 21 + 66533130 TGCGGGCCTGCACGGTGTGGG i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567769 21 - 578057 TGCGGGCGTGCACGGTGTGGA i gorGor5.CYUI01015848v1 C 0 I 29 s rheMac8.chr10 92829310 21 - 92844088 TGCGGGTGTGTGCGGTGTGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96494864 21 + 96509753 TGCGGGCATGCACGGCGTGGG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3766702 21 - 3785965 TGCGGGCGTGCACGGTGTGAG i cerAty1.NW_012001373v1 I 2 C 0 s chlSab2.chr2 90356817 21 - 90373283 TGCGGGCGTGCACGGTGTGAG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157513 21 - 179258 TGCGGGTGTGTGCGGTGTGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626854 21 - 5823884 TGCGGGTGTGTGCGGTGTGGG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e nomLeu3.chr13 110089526 0 - 110113093 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=-7270.000000 s hg38.chr20_KI270870v1_alt 179003 6 + 183433 GT--------GAGT s panTro5.chr20 66515998 9 + 66533130 GTCG-----TGAGT i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 110089526 2 - 110113093 ------------GT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829331 6 - 92844088 ---A-----TGAGT i rheMac8.chr10 C 0 I 68 s macFas5.chr10 96494885 11 + 96509753 ---GTCGTCTGAGT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3766723 6 - 3785965 ---G-----TGTGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90356838 6 - 90373283 ---G-----TGTGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157534 6 - 179258 ---A-----TGAGT i manLeu1.NW_012101652v1 C 0 I 68 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626875 0 - 5823884 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e gorGor5.CYUI01015848v1 567790 29 - 578057 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=22368.000000 s hg38.chr20_KI270870v1_alt 179009 17 + 183433 GTGGGCACACGTGATGT s panTro5.chr20 66516007 17 + 66533130 GTGGGCACGCGTGATGT i panTro5.chr20 C 0 C 0 s nomLeu3.chr13 110089528 17 - 110113093 GTGGGCACGCGTGATGT i nomLeu3.chr13 C 0 I 3 s macFas5.chr10 96494896 17 + 96509753 GCGGGCACGCGTGATGT i macFas5.chr10 C 0 I 3 s cerAty1.NW_012001373v1 3766729 17 - 3785965 GTGGGTACGCGTGATGT i cerAty1.NW_012001373v1 C 0 I 3 s chlSab2.chr2 90356844 17 - 90373283 GTGGGCACACGTGATGT i chlSab2.chr2 C 0 I 3 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626875 0 - 5823884 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e gorGor5.CYUI01015848v1 567790 29 - 578057 I e manLeu1.NW_012101652v1 157540 68 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92829337 68 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=27380.000000 s hg38.chr20_KI270870v1_alt 179026 40 + 183433 GTCATG--------TGACTGCGG-------------ATGTGCACAGTGTGAG--GTCGTGTGA s panTro5.chr20 66516024 40 + 66533130 GTCATG--------TGACTGCGG-------------ATGTGCACAGTGTGAG--GTCGTGTGA i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567819 32 - 578057 GTCATG--------TGA---------------------GTGCACGGTGTGGG--GTCTTGTGA i gorGor5.CYUI01015848v1 I 29 C 0 s nomLeu3.chr13 110089548 40 - 110113093 GTCATG--------TGAGTGCAG-------------ATGTGCACGGTGTGGG--GTCGTGTGA i nomLeu3.chr13 I 3 I 7 s macFas5.chr10 96494916 61 + 96509753 GTCGTGAGTGCAGCTGTGTGCGGTGTGGGGTAATGTTCATGCACGGTGTGGGGT--CGTGTGA i macFas5.chr10 I 3 C 0 s cerAty1.NW_012001373v1 3766749 40 - 3785965 GTCATG--------TAAGTGCGG-------------ACATGCACGGCGTGGG--GTCGTGTGA i cerAty1.NW_012001373v1 I 3 C 0 s chlSab2.chr2 90356864 29 - 90373283 GTCATG--------TAAGTGCGG-------------GCGTGCATG--GTGTG----------- i chlSab2.chr2 I 3 I 136 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626875 0 - 5823884 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157540 68 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92829337 68 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=6591.000000 s hg38.chr20_KI270870v1_alt 179066 8 + 183433 ATGCGGGC s panTro5.chr20 66516064 8 + 66533130 ATGCGGGC i panTro5.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567851 8 - 578057 GTGCGGGC i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96494977 8 + 96509753 GTGCGGGT i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3766789 8 - 3785965 GTGCGGGC i cerAty1.NW_012001373v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626875 0 - 5823884 C e chlSab2.chr2 90356893 136 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181085 109 + 62195757 I e manLeu1.NW_012101652v1 157540 68 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e nomLeu3.chr13 110089588 7 - 110113093 I e rheMac8.chr10 92829337 68 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=11074.000000 s hg38.chr20_KI270870v1_alt 179074 12 + 183433 GTGCATGGTGTG s panTro5.chr20 66516072 12 + 66533130 GTGCACAGTGTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181194 12 + 62195757 GTGCACGGTGTG i panPan2.chr20 I 109 C 0 s gorGor5.CYUI01015848v1 567859 12 - 578057 GTGCATGCTGTG i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96494985 12 + 96509753 GTGTGCGGTGTG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3766797 12 - 3785965 ACGCGTGATGTG i cerAty1.NW_012001373v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626875 0 - 5823884 C e chlSab2.chr2 90356893 136 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e manLeu1.NW_012101652v1 157540 68 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e nomLeu3.chr13 110089588 7 - 110113093 I e rheMac8.chr10 92829337 68 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=25259.000000 s hg38.chr20_KI270870v1_alt 179086 24 + 183433 CAGTCGTGAGTTCCGGCGTGCACG s panTro5.chr20 66516084 24 + 66533130 GAGTCGTGAGTTCGGGCGTGCACG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181206 22 + 62195757 GGGTCGTGAGTTCAGGCGTGCA-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567871 22 - 578057 GGGTCGTGAGTTCAGGCGTGCA-- i gorGor5.CYUI01015848v1 C 0 C 0 s macFas5.chr10 96494997 21 + 96509753 GG---ATGAGTTCGGGCGTGCACG i macFas5.chr10 C 0 C 0 s cerAty1.NW_012001373v1 3766809 24 - 3785965 GGGTCGTGAGTGCGGGCACGCGTG i cerAty1.NW_012001373v1 C 0 C 0 s colAng1.NW_012114444v1 5626875 19 - 5823884 -----GTGAGTTCGGGCGTGCACG i colAng1.NW_012114444v1 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e chlSab2.chr2 90356893 136 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e manLeu1.NW_012101652v1 157540 68 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e nomLeu3.chr13 110089588 7 - 110113093 I e rheMac8.chr10 92829337 68 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=19642.000000 s hg38.chr20_KI270870v1_alt 179110 24 + 183433 ATGTGGGGT-CTTGTGAGTG---------------------CGGGC s panTro5.chr20 66516108 45 + 66533130 GTGTGGGGT-CGTGTGAGTGCACGGTGTGGGGTCGTGAGTTCAGGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181228 23 + 62195757 GTGT-GGGT-CGTGTGAGTA---------------------CGGAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567893 17 - 578057 GTGTGGGGT-TGTGTGAG---------------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089595 24 - 110113093 GTGTGGGGT-CGTGTGAGTA---------------------CGGAA i nomLeu3.chr13 I 7 C 0 s macFas5.chr10 96495018 23 + 96509753 --GTGGGGTTCATGTGAGTG---------------------CGGGC i macFas5.chr10 C 0 I 6 s cerAty1.NW_012001373v1 3766833 22 - 3785965 ATGTGGGGT---CGTGAGTG---------------------CAGGT i cerAty1.NW_012001373v1 C 0 I 6 s colAng1.NW_012114444v1 5626894 22 - 5823884 GTGTGGGGT---CGTGAGTG---------------------CGGGC i colAng1.NW_012114444v1 C 0 I 26 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e chlSab2.chr2 90356893 136 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e manLeu1.NW_012101652v1 157540 68 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92829337 68 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=845.000000 s hg38.chr20_KI270870v1_alt 179134 1 + 183433 G s panTro5.chr20 66516153 1 + 66533130 G i panTro5.chr20 C 0 I 28 s panPan2.chr20 62181251 1 + 62195757 A i panPan2.chr20 C 0 C 0 s nomLeu3.chr13 110089619 1 - 110113093 G i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96495047 1 + 96509753 G i macFas5.chr10 I 6 I 25 s cerAty1.NW_012001373v1 3766861 1 - 3785965 G i cerAty1.NW_012001373v1 I 6 I 135 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626916 26 - 5823884 I e chlSab2.chr2 90356893 136 - 90373283 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e gorGor5.CYUI01015848v1 567910 0 - 578057 C e manLeu1.NW_012101652v1 157540 68 - 179258 I e saiBol1.JH378156 16347438 0 + 16356641 C e macNem1.NW_012014244v1 16964859 175 - 16982598 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e rheMac8.chr10 92829337 68 - 92844088 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=81622.000000 s hg38.chr20_KI270870v1_alt 179135 15 + 183433 TGCATGGTGTGGGAT s panTro5.chr20 66516182 15 + 66533130 TGCATGGTGTGGGAT i panTro5.chr20 I 28 C 0 s panPan2.chr20 62181252 15 + 62195757 TGCATGGTGTGGGAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567910 15 - 578057 TGCACGGTGTGGGGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089620 15 - 110113093 TGCACGGTATGGGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829405 15 - 92844088 TGCATGGTGTGGGAT i rheMac8.chr10 I 68 C 0 s macFas5.chr10 96495073 15 + 96509753 TGCATGGTGTGGGAT i macFas5.chr10 I 25 C 0 s macNem1.NW_012014244v1 16965034 15 - 16982598 TGCATGGTGTGGGAT i macNem1.NW_012014244v1 I 175 C 0 s cerAty1.NW_012001373v1 3766997 15 - 3785965 TGCATGGTGTGGGAT i cerAty1.NW_012001373v1 I 135 C 0 s chlSab2.chr2 90357029 15 - 90373283 TGCATGGTGTGGGAT i chlSab2.chr2 I 136 C 0 s manLeu1.NW_012101652v1 157608 15 - 179258 TGCATGGTGTGGGAT i manLeu1.NW_012101652v1 I 68 C 0 s saiBol1.JH378156 16347438 13 + 16356641 TGCA--GTGTGGGGT i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e colAng1.NW_012114444v1 5626916 26 - 5823884 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=1070133.000000 s hg38.chr20_KI270870v1_alt 179150 157 + 183433 CGTGTGAGTGAAGATATGTGTGGTGTGGGGTGGACGGGTTAGCTTTCAGATTgaa----------------tggaagcaggaacaagtggaaagctgttgaaattttccaggcgagagataaagataaaaactaagacactggctgctacagtggagaagatTCAGTGATACA s panTro5.chr20 66516197 157 + 66533130 CGTGTGAGTGAAGATATGTGTGGTGTGGGGTGGACGGGTTAGCTTTCAGATTgaa----------------tggaagcaggaacaagtggaaagctgttgaaattttccaggcgagagataaagatAAAAACGAAGACACTGGCTGCTACAGTGGAGAAGATTCAGTGATACA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181267 157 + 62195757 CGTGTGAGTGAAGATATGTGTGGTGTGGGGTGGACGGGTTAGCTTTCAGATTgaa----------------tggaagcaggaacaagtggaaagctgttgaaattttccaggcgagagataaagataaaaacgaagacactggctgctacagtggagaagattcagtgataca i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 567925 173 - 578057 CCTGTGAGTGAAGATATGTGTGGTGTGGGGTGGACGGGTTAGCTTTCAGATTGAATGGACACAGGACACATTGGAAGCAGGAACAAGTGGAAAGCTGTTGAAACTTTCCAGGCGAGAGAGAAAGATAAAAACTAAGACACTGGCTGCTACAGTGGAGAAGATTCAGTGATACA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089635 173 - 110113093 CGTGTGAGTGTAGATACTTGTGGTGTGGCATGGACGGGTTAGCTTTCAGATTGAATGGACACAGGACACATtggaagcaggaaccagtggaaagctgttgaaattttccaggcgagagatAGAGATAAAAACTAAGACACTGGCTTCCACAGTGGAGAAGATTCAGTGATACA i nomLeu3.chr13 C 0 T 8 s rheMac8.chr10 92829420 173 - 92844088 CATGTGAGTGTAGATGTGTGTGGTGTGGGGTAGATGGGTTAGCTTTCAGATTGAATGGACACAGGTCACATtggaagcaggaaccagtggaaagctgttgaaattttccaggcgagatataaagatgAAAACTAAGAGACTGGCTTCTACAGTGGAGAAGATTGAATGATACA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495088 173 + 96509753 CATGTGAGTGTAGATATGTGTGGTGTGGGGTAGATGGGTTAGCTTTCAGATTGAATGGACACAGGTCACATtggaagcaggaaccagtggaaagctgttgaaattttccaggcgagatataaaaatgAAAACTAAGAGACTGGCTTCTACAGTGGAGAAGATTGAATGATACA i macFas5.chr10 C 0 T 7 s macNem1.NW_012014244v1 16965049 173 - 16982598 CATGTGAGTGTAGATATGTGTGGTGTGGGGTAGATGGGTTAGCTTTCAGATTGAATGGACACAGGTCACATtggaagcaggaaccagtggaaagctgttgaaattttccaggcgagatataaagatgaaaactaagagactggcttctacagtggagAAGATTGAATGATACA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767012 173 - 3785965 CATGTGAGTGTAGATACGTGTGGTGTGGGGTAGATGGGTTAGCTTTCAGATTGAATGGACACAGGTCACATtggaagcaggaaccagtggaaagctgttgaaattttccaggcgagatataaagatgaaaactaagagactggcttctacagtggagAAGATTGAATGATACA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357044 173 - 90373283 CATGTGAGTGTAGATATGTGTGGTGTGGGGTAGATGGGTTAGCTTTCAGATTGAATGGACGCAGGTCACATTGGGAGCAGGAACCAGTGGAAAGCTGTTAAAATTTTCCAGGCGAGATATAAAGATGAAAACTAAGAGACTGGCTTCTACAGTGGAGAAGATTGAATGATACA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157623 173 - 179258 CATGTGAGTGTAGATATGTGTGGTGTGGGGTAGATGGGTTAGCTTTCAGATTGAATGGACACAGGTCACATtggaagcaggaaccagtggaaagctgttgaaattttccaggcgagatataaagatgaaaactaagagactggcttctacagtggagAAGATTGAATGATACA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5626942 173 - 5823884 CGTGTGAGTGTAGATATGTGTGGTGTGGGGTGGATGGGTTAGCTTTCAGATTGAATGGACACAGGTCACATtggaagtaggaaccagtggaaagctgttgaaattgtccaggcgagatatACAGATGAAAACGAAGAGACTGGCTTCTACAGTAGAGAAGATTGAATGATACA i colAng1.NW_012114444v1 I 26 C 0 s saiBol1.JH378156 16347451 173 + 16356641 CATGTGAGTGTAGATGTGTGTGGTGTGAGGGGGATAGGTTAGCTCTCTGATTGAATGGACACAGGACACATtggaagcaggaaccagtggaaagctgttggaattttccaggcgagagataaagatgaaaactaagacactggtttctacagtggagAAGATTGAATGATACA i saiBol1.JH378156 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=0.000000 s hg38.chr20_KI270870v1_alt 179307 46 + 183433 TAAAATGGTACAGTCCTTCTGAGGAAGGGCACGTGAGGTGTTCGTT e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e nomLeu3.chr13 110089808 8 - 110113093 T e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I e macFas5.chr10 96495261 7 + 96509753 T a score=100.000000 s hg38.chr20_KI270870v1_alt 179353 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 8 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I e macFas5.chr10 96495261 7 + 96509753 T a score=13825.000000 s hg38.chr20_KI270870v1_alt 179354 53 + 183433 TGATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCACGTGAGGTGTTCGTT s nomLeu3.chr13 110089801 53 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATGTGAGGTGTTCATT i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495254 53 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATGTGAGGTGTTCATT i macFas5.chr10 T 7 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=300.000000 s hg38.chr20_KI270870v1_alt 179407 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=13825.000000 s hg38.chr20_KI270870v1_alt 179408 53 + 183433 TGATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCACGTGAGGTGTTCGTT s nomLeu3.chr13 110089801 53 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATGTGAGGTGTTCATT i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495254 53 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATGTGAGGTGTTCATT i macFas5.chr10 T 54 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=300.000000 s hg38.chr20_KI270870v1_alt 179461 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184665 137 + 159171411 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=26251.000000 s hg38.chr20_KI270870v1_alt 179462 55 + 183433 TGATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCGTTGT s nomLeu3.chr13 110089801 55 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCATTGT i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495254 55 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATG------TGAGGTGTTCATTGT i macFas5.chr10 T 54 T 54 s calJac3.chr5 58184802 61 + 159171411 TGATACATACAGTGATACAGTCCATCTGAGGAAGGACTTGTGAGCCTGAGGTGTTCATTGT i calJac3.chr5 I 137 T 61 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=13552.000000 s hg38.chr20_KI270870v1_alt 179517 52 + 183433 GATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCACGTGAGGTGTTCGTT s nomLeu3.chr13 110089802 52 - 110113093 GATACATACAATGATACAGTCCTTCTGAGGAAGGGCATGTGAGGTGTTCATT i nomLeu3.chr13 T 54 T 54 s macFas5.chr10 96495255 52 + 96509753 GATACATACAATGATACAGTCCTTCTGAGGAAGGACATGTGAGGTGTTCATT i macFas5.chr10 T 54 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184863 61 + 159171411 T e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=300.000000 s hg38.chr20_KI270870v1_alt 179569 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184863 61 + 159171411 T e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=25105.000000 s hg38.chr20_KI270870v1_alt 179570 53 + 183433 TGATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCGTT s nomLeu3.chr13 110089801 53 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCATT i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495254 53 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATG------TGAGGTGTTCATT i macFas5.chr10 T 54 C 0 s calJac3.chr5 58184802 59 + 159171411 TGATACATACAGTGATACAGTCCATCTGAGGAAGGACTTGTGAGCCTGAGGTGTTCATT i calJac3.chr5 T 61 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=600.000000 s hg38.chr20_KI270870v1_alt 179623 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 s calJac3.chr5 58184861 1 + 159171411 G i calJac3.chr5 C 0 T 60 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=25105.000000 s hg38.chr20_KI270870v1_alt 179624 53 + 183433 TGATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCGTT s nomLeu3.chr13 110089801 53 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCATT i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495254 53 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATG------TGAGGTGTTCATT i macFas5.chr10 T 54 C 0 s calJac3.chr5 58184802 59 + 159171411 TGATACATACAGTGATACAGTCCATCTGAGGAAGGACTTGTGAGCCTGAGGTGTTCATT i calJac3.chr5 T 60 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=600.000000 s hg38.chr20_KI270870v1_alt 179677 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 s calJac3.chr5 58184861 1 + 159171411 G i calJac3.chr5 C 0 T 60 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=25105.000000 s hg38.chr20_KI270870v1_alt 179678 53 + 183433 TGATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCGTT s nomLeu3.chr13 110089801 53 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCATT i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495254 53 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATG------TGAGGTGTTCATT i macFas5.chr10 T 54 C 0 s calJac3.chr5 58184802 59 + 159171411 TGATACATACAGTGATACAGTCCATCTGAGGAAGGACTTGTGAGCCTGAGGTGTTCATT i calJac3.chr5 T 60 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=600.000000 s hg38.chr20_KI270870v1_alt 179731 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 s calJac3.chr5 58184861 1 + 159171411 G i calJac3.chr5 C 0 T 60 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=25105.000000 s hg38.chr20_KI270870v1_alt 179732 53 + 183433 TGATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCGTT s nomLeu3.chr13 110089801 53 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCATT i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495254 53 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATG------TGAGGTGTTCATT i macFas5.chr10 T 54 C 0 s calJac3.chr5 58184802 59 + 159171411 TGATACATACAGTGATACAGTCCATCTGAGGAAGGACTTGTGAGCCTGAGGTGTTCATT i calJac3.chr5 T 60 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=600.000000 s hg38.chr20_KI270870v1_alt 179785 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 s calJac3.chr5 58184861 1 + 159171411 G i calJac3.chr5 C 0 T 60 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=25105.000000 s hg38.chr20_KI270870v1_alt 179786 53 + 183433 TGATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCGTT s nomLeu3.chr13 110089801 53 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCATT i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495254 53 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATG------TGAGGTGTTCATT i macFas5.chr10 T 54 C 0 s calJac3.chr5 58184802 59 + 159171411 TGATACATACAGTGATACAGTCCATCTGAGGAAGGACTTGTGAGCCTGAGGTGTTCATT i calJac3.chr5 T 60 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=600.000000 s hg38.chr20_KI270870v1_alt 179839 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 s calJac3.chr5 58184861 1 + 159171411 G i calJac3.chr5 C 0 T 60 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=26251.000000 s hg38.chr20_KI270870v1_alt 179840 55 + 183433 TGATACGTACAATGGTACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCGTTGT s nomLeu3.chr13 110089801 55 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATG------TGAGGTGTTCATTGT i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96495254 55 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATG------TGAGGTGTTCATTGT i macFas5.chr10 T 54 T 54 s calJac3.chr5 58184802 61 + 159171411 TGATACATACAGTGATACAGTCCATCTGAGGAAGGACTTGTGAGCCTGAGGTGTTCATTGT i calJac3.chr5 T 60 T 61 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=296.000000 s hg38.chr20_KI270870v1_alt 179895 8 + 183433 GAGACGTA s nomLeu3.chr13 110089856 8 - 110113093 CTGTCGTA i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495255 8 + 96509753 GATACATA i macFas5.chr10 T 54 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184863 61 + 159171411 T e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=11802.000000 s hg38.chr20_KI270870v1_alt 179903 44 + 183433 CAATGGTACAGTCCTTCTGAGGAAGGGCATGTGAGGTGTTCGTT s nomLeu3.chr13 110089810 44 - 110113093 CAATGATACAGTCCTTCTGAGGAAGGGCATGTGAGGTGTTCATT i nomLeu3.chr13 T 54 T 54 s macFas5.chr10 96495263 44 + 96509753 CAATGATACAGTCCTTCTGAGGAAGGACATGTGAGGTGTTCATT i macFas5.chr10 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184863 61 + 159171411 T e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=300.000000 s hg38.chr20_KI270870v1_alt 179947 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184863 61 + 159171411 T e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=13659.000000 s hg38.chr20_KI270870v1_alt 179948 53 + 183433 TGAGACGTACAATGGTACAGTCCTTCTGAGGAAGGGCATGTGAGGTGTTCGTT s nomLeu3.chr13 110089801 53 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATGTGAGGTGTTCATT i nomLeu3.chr13 C 0 T 54 s macFas5.chr10 96495254 53 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATGTGAGGTGTTCATT i macFas5.chr10 T 54 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184863 61 + 159171411 T e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=300.000000 s hg38.chr20_KI270870v1_alt 180001 1 + 183433 G s nomLeu3.chr13 110089800 1 - 110113093 G i nomLeu3.chr13 T 54 C 0 s macFas5.chr10 96495307 1 + 96509753 G i macFas5.chr10 C 0 T 54 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184863 61 + 159171411 T e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=13959.000000 s hg38.chr20_KI270870v1_alt 180002 54 + 183433 TGAGACGTACAATGGTACAGTCCTTCTGAGGAAGGGCATGTGAGGTGTTCGTTG s nomLeu3.chr13 110089801 54 - 110113093 TGATACATACAATGATACAGTCCTTCTGAGGAAGGGCATGTGAGGTGTTCATTG i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96495254 54 + 96509753 TGATACATACAATGATACAGTCCTTCTGAGGAAGGACATGTGAGGTGTTCATTG i macFas5.chr10 T 54 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e calJac3.chr5 58184863 61 + 159171411 T e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=546.000000 s hg38.chr20_KI270870v1_alt 180056 1 + 183433 T s nomLeu3.chr13 110089855 1 - 110113093 T i nomLeu3.chr13 C 0 C 0 s macFas5.chr10 96495308 1 + 96509753 T i macFas5.chr10 C 0 T 48 s calJac3.chr5 58184802 1 + 159171411 T i calJac3.chr5 T 61 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I a score=-250.000000 s hg38.chr20_KI270870v1_alt 180057 6 + 183433 GAGACG s nomLeu3.chr13 110089856 6 - 110113093 CTGTCG i nomLeu3.chr13 C 0 T 54 s calJac3.chr5 58184803 6 + 159171411 GATACA i calJac3.chr5 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e cerAty1.NW_012001373v1 3767185 0 - 3785965 C e colAng1.NW_012114444v1 5627115 0 - 5823884 C e chlSab2.chr2 90357217 0 - 90373283 C e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e panPan2.chr20 62181424 0 + 62195757 C e gorGor5.CYUI01015848v1 568098 0 - 578057 C e manLeu1.NW_012101652v1 157796 0 - 179258 C e saiBol1.JH378156 16347624 0 + 16356641 C e macNem1.NW_012014244v1 16965222 0 - 16982598 C e cebCap1.NW_016107870v1 1221194 186 + 1231380 I e aotNan1.NW_018500483v1 2747643 514 + 11732439 I e panTro5.chr20 66516354 0 + 66533130 C e rheMac8.chr10 92829593 0 - 92844088 C e otoGar3.GL873542 22922607 166 + 22939663 I e macFas5.chr10 96495309 48 + 96509753 T a score=74518.000000 s hg38.chr20_KI270870v1_alt 180063 8 + 183433 TAC----AATGG s panTro5.chr20 66516354 8 + 66533130 TAC----AATGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181424 8 + 62195757 tac----aatga i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568098 8 - 578057 TAC----AATGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089808 8 - 110113093 TAC----AATGA i nomLeu3.chr13 T 54 C 0 s rheMac8.chr10 92829593 8 - 92844088 TAC----AATGA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495261 8 + 96509753 TAC----AATGA i macFas5.chr10 T 48 C 0 s macNem1.NW_012014244v1 16965222 8 - 16982598 TAC----AATGA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767185 8 - 3785965 TAC----AATGA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357217 8 - 90373283 TAC----AATGA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157796 8 - 179258 TAC----AATGA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627115 8 - 5823884 TAC----AATGA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184809 8 + 159171411 TAC----AGTGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347624 12 + 16356641 TACAGTGAGTGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221380 8 + 1231380 TAC----AATGA i cebCap1.NW_016107870v1 I 186 C 0 s aotNan1.NW_018500483v1 2748157 8 + 11732439 TAC----AATAA i aotNan1.NW_018500483v1 I 514 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e canFam3.chr24 47668006 34 + 47698779 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=69200.000000 s hg38.chr20_KI270870v1_alt 180071 6 + 183433 TACAGT s panTro5.chr20 66516362 6 + 66533130 TACAGT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181432 6 + 62195757 tacagt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568106 6 - 578057 TACAGT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089816 6 - 110113093 TACAGT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829601 6 - 92844088 TACAGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495269 6 + 96509753 TACAGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965230 6 - 16982598 TACAGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767193 6 - 3785965 TACAGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357225 6 - 90373283 TGCAGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157804 6 - 179258 TACAGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627123 6 - 5823884 TACAGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184817 6 + 159171411 TACAGT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347636 6 + 16356641 TACAGT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221388 6 + 1231380 TACAGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2748165 6 + 11732439 TACAGT i aotNan1.NW_018500483v1 C 0 C 0 s canFam3.chr24 47668040 6 + 47698779 TAGGGT i canFam3.chr24 I 34 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e mm10.chr2 181853692 195 + 182113224 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=306104.000000 s hg38.chr20_KI270870v1_alt 180077 31 + 183433 CCTTCTGAGGAAGGGCATG------TGAGGTGTTCGT s panTro5.chr20 66516368 31 + 66533130 CCTTCTGAGGAAGAGCATG------TGAGGTGTTCAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181438 31 + 62195757 ccttctgaggaagggcatg------tgaggtgtTCAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568112 31 - 578057 CCTTCTGAGGAAGGGCATG------TGAGGTGTTCAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089822 31 - 110113093 CCTTCTGAGGAAGGGCATG------TGAGGTGTTCAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829607 31 - 92844088 CCTTCTGAGGAAGGACATG------TGAGGTGTTCAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495275 31 + 96509753 CCTTCTGAGGAAGGACATG------TGAGGTGTTCAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965236 31 - 16982598 CCTTCTGAGGAAGGACATG------Tgagatgttcat i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767199 31 - 3785965 CCTTCTGAGGAAGGACATG------TGAGGTGTTCAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357231 31 - 90373283 CCTTCTGAGGAAGGACATG------TGAGGTGTTCAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157810 31 - 179258 CCTTCTGAGGAAGGACATG------TGAGGTGTTCAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627129 31 - 5823884 CCTTCTGAGGAAGGACATG------TGAGGTGTTCAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184823 37 + 159171411 CCATCTGAGGAAGGACTTGTGAGCCTGAGGTGTTCAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347642 37 + 16356641 CCGCCTGAGGAAAGACATGTGAGCCTGAGGTGTTCAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221394 37 + 1231380 CCGTCTGAGGAAGGACATGTGAGCCTGAGGTGTTCAT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2748171 37 + 11732439 CCATCTGAGGAAGGACATGTGAGCCTGAGGTGTACAT i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181853887 23 + 182113224 CTTTCTGAGGAAGAACAGG------AGAG-------- i mm10.chr2 I 195 C 0 s canFam3.chr24 47668046 16 + 47698779 CTTTCTGAGGAAGGGT--------------------- i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1927733 469 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=117744.000000 s hg38.chr20_KI270870v1_alt 180108 11 + 183433 TGTCTGTGGTA s panTro5.chr20 66516399 11 + 66533130 TGTCTGTGGTA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181469 11 + 62195757 TGTCTGTGGTA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568143 11 - 578057 TGTCTGTGGTA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089853 11 - 110113093 TGTCTGTCGTA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829638 11 - 92844088 TGTTTGTTGTA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495306 11 + 96509753 TGTTTgttgta i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965267 11 - 16982598 tgtttgttgta i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767230 11 - 3785965 TGTTTgttgta i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357262 11 - 90373283 TGTTTgttgta i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157841 11 - 179258 TGTTTGTTgta i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627160 11 - 5823884 TGTTTgttgta i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184860 11 + 159171411 TGTCTGTTGTA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347679 11 + 16356641 TGTCTGTTGTA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221431 11 + 1231380 TGTCTGTTGTA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2748208 11 + 11732439 TGTGTGTTGTA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1928202 11 - 2029793 TGTCTGTCGTA i proCoq1.NW_012150197v1 I 469 C 0 s mm10.chr2 181853910 9 + 182113224 --CCTAAGGTA i mm10.chr2 C 0 I 2 s canFam3.chr24 47668062 3 + 47698779 --------GTA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I e otoGar3.GL873542 22922607 166 + 22939663 I a score=1103221.000000 s hg38.chr20_KI270870v1_alt 180119 84 + 183433 GACCTGGGTCTGTGGGAGGCTCAGGATTCTGGTCCGGACTGGAGTAGAACCTGGGGAGCTATTGGCTGGCCTCTGTTATTTAAA s panTro5.chr20 66516410 84 + 66533130 GACCTGGGTCTGTGGGAGGCTCAGGATTCTGGTCCGGACTGGATTAGAACCTTGGGAGCTATTGGCTGGCCTCTGTTATTTAAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181480 84 + 62195757 GACCTGGGTCTGTGGGAGGCTCAGGATTCTGGTCCGGACTGGATTAGAACCTTGGGAGCTATTGGCTGGCCTCTGTTATTTAAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568154 83 - 578057 GACCTGGGTCTAt-ggaggctcaggattctggtccggactggattagaaccttgggagctattggctggcctctgttatttaaa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089864 84 - 110113093 GACCTGGGTCTgtgtgaggctcaggattctggtccggactggattagaaccttgggagctgttggctggcctctgttatttaaa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829649 84 - 92844088 GACCTGGGTCTATGGGAGGCTCAGGATCCTggtcaggactggattagaaccttgggagctattggctggcctctgttatttaaa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495317 84 + 96509753 gacctgggtctatgggaggctcaggatcctggtcaggactggattagaaccttgggagctattggctggcctctgttatttaaa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965278 84 - 16982598 gacctgggtctgtgggaggctcaggatcctggtcaggactggattagaaccttgggagctattggctggcctctggtatttaaa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767241 84 - 3785965 gacctgggtctatgggaggctcaggatcctggtcaggactggattagaaccttgggagctattggctggcctctgttatttaaa i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357273 84 - 90373283 gacctgggtctatgggaggctcaggatcctggtcaggactggattagaaccttgggagctattggctggcctctgttatttaaa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157852 82 - 179258 gacctgggtatatgggaggctcaggatcctggtcaggactggattagaaccttgggagctattggctggc--ctgttatttaaa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627171 84 - 5823884 gacctgggtctatgggaggctcaggatcctggtcaggactggattagaaccttgggagctattggctggcctctgttatttaaa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184871 84 + 159171411 GACCTGGGTCTGTGGGAGGATCAGGATCCTGATCAGGACTGGATTAGAAACTTGGGAGCTGTTGGCTGGCCTCTGTCATTTAAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347690 84 + 16356641 AACTTGGGTCTGTGGGAGGCTCCGGATCCTGGTCAGGACTGGATCAGAAGCTTGGGAGCTGTTGGCTGGCATTCGTCATTTAAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221442 84 + 1231380 GACCTGGGCCTGTGGGAGGCTCAGGATCCTGGTCAGGACTGGATTAGAACCTTGGGAGCTGTTGGCTGGCCTCTGTCATTTAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2748219 84 + 11732439 GGCCTGGGTCTCTGGGAGGCTCAGAATCCTGGTCAGGACTGGATTAGAACCTTGGGAGCTGTTGGCTGGCCTCTGTCATTTAAA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1928213 84 - 2029793 GACATGGGTCTGTGGCAGGCTCAGGACCCCAGTCAGGACTGGATTAGACTCTTGTGGGCCGTTAGCTGGTCTCTGTTATTTACC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22922773 84 + 22939663 GACATGGGTCTGTGGGCGGCTCAGGGTCCCAGTCAGGACTGGATTAGATCCTTGGGTGCTGTTAGCTGGTCTCTGTTACTTAAA i otoGar3.GL873542 I 166 C 0 s mm10.chr2 181853921 74 + 182113224 GTGCTGAGTCTGGGGTAGGTTTGA---CTTGATTGGGACTAAGTTTCAACTTGGGGA-------ACTGGTCTATATTATTTAAA i mm10.chr2 I 2 C 0 s canFam3.chr24 47668065 72 + 47698779 GACCTAGGTAGATTTGGGTCCCAG-----------GGACTAGATCAGAGCCTTGGGGGCCGCTTCCGAGTGTCTGTTAC-TAGA i canFam3.chr24 C 0 C 0 e micMur3.chr18 56932439 1924 + 57149010 I e dasNov3.JH569290 340246 13414 - 397369 I a score=1505838.000000 s hg38.chr20_KI270870v1_alt 180203 118 + 183433 GCCACAGAATGGATGTAAAACC-AAGGACTAGCAGTCATACTGAGACGGTGAAATGGTGGAAATTGGAACCTTAGGGAGCAGCACTGGGCTGGATGGAAGAGGA--AGAGCCTGCAAGAGA s panTro5.chr20 66516494 118 + 66533130 GCCACAGAATGGATGTAAAACC-AAGGACTAGCAGTCATACTGAGACGGTGAAATGGTGGAAATTGGAACCTTAGGGAGCAGCACTGGGCTGGATGGAAGAGGA--AGAGCCTGCAAGAGA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181564 118 + 62195757 GCCACAGAATGGATGTAAAACC-AAAGACTAGCAGTCATACTGAGACGGTGAAATGGTGGAAATTGGAACCTTAGGGAGCAGCACTGGGCTGGATGGAAGAGGA--AGAGCCTGCAAGAGA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568237 118 - 578057 gccacagaatggatgtaaaacc-aaggactagcagtcatactgagacggtgaaatggtggaaattggaaccttagggagcagcactgggctggatggaagagga--agagcctgcaagaga i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110089948 121 - 110113093 gccacagaatggatgtgaaaccaaaggactagcagtcataccgagatggaaaaatggtgggaaattgaaccttagggagcagcactgggctggatggaagaggaagagagcctgcaagaga i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829733 118 - 92844088 gccacagaatggatgtaaaacc-aaggactagcagtcatactgagagggggaaatggtggaaattggaaccttagggagcatcactgggctggatggaagagga--agagcctgcaagaga i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495401 118 + 96509753 gccacagaatggatgtaaaacc-aaggactagcagtcatactgagagggggaaatggtggaaattggaaccttagggagcatcactgggctggatggaagagga--agagcctgcaagaga i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965362 118 - 16982598 gccacagaatggatgtaaaacc-aaggactagcagtcatactgagagggggaaatggtggaaattggaaccttagggagcatcactgggctggatggaagagga--agagcctgcaagaga i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767325 117 - 3785965 gccacagaatggatgtaaaacc-aaggactagcagtcataccgagagggggaaat-gtagaaattggaaccttagggagcatcactgggctggatggaagagga--agagcctgcaagaga i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357357 118 - 90373283 gccacagaatggatgtaaaacc-aaggactagcagtcataccgagagggggaaatggtggaaattggaaccttagggagcatcactgggctggatggaagagga--agagcctgcaagaga i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 157934 118 - 179258 gccacagaatggatgtaaaacc-aaggactagcagtcatatcgagagggggaaatggtggaaattggaaccttagggagcatcactgggctggatggaagagga--agagcctgcaagaga i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627255 118 - 5823884 gccacagaatggatgtaaaacc-acggactagcaggcataccgagagggggaaatggtggaaattggaaccttggggagcatcactgggctggatggaagagga--agagcctgcaagaga i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58184955 117 + 159171411 ACCACAGAATGGATGTAAAACC-AAGGACTAGCAGTCATACCTAGAGGGGGAAATGATAGAAATTGGAACGTTAGG-AGCACAACTGGACTGGCTGGAAGAGGA--AGAGCCTGCAAGAGA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347774 116 + 16356641 ACCACAGAATGGATGTAAATCC-AAGGACTAGCAGTCATACCTAGAGGGGGAAATGATAGAAATTGGAACCTTAGG--GCACGACTGGGCTGACTGGAAGAGGA--AGAGCCTGCAAGAGA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221526 117 + 1231380 ACCACAGAATGGAGGTAAAACC-AAGGACTAGCAGTCATACCTAGAAGGCGAAATGGTAGAAATTGGAACCTTAGG-CGCACGACTAGGCTGGCTGGAAGAGGA--AGAGCCTGCAAGAGA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2748303 116 + 11732439 ACCACAGAATGGGTGTAAGACC-AAGGACTAGCAGTCACACCTAGAGGG-GAAATGGTAGAAACTGGAACCTTAGG-CACACGACTGGGCTGGCTGGAAGAGGA--AGAGCCTGCAAGAGA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1928297 116 - 2029793 CCCGCAGATTGGATGTCAAACC-AAAGATTAGCAGGGACACTGAGAGGGGG--ATGATGGAAATTGGAGCCTTAGGGAGCACCACCAGACTGGGTAGAAGAGGA--GGAGCCAGCAAGAGA i proCoq1.NW_012150197v1 C 0 I 83 s otoGar3.GL873542 22922857 114 + 22939663 CCCACATACTGGATGTCAAACA-AAGGATTAGTAGGCACCTTGA-AAGTGA--ATGCTGGAAATTGGAACCTTAGGG-GTGTCACTAGTCCAGGTGGAAGAGAA--AGAGCCAGCAAGAGA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181853995 96 + 182113224 TTTACAGAATAGATGTTAAACC-AAGGATTAGTAGTCATACTGAGAGAGGAGTAGAGTGGACACT-GAGCCTTTGGGCGTGTCAC---------------------AAGGCCT--AAGAGA i mm10.chr2 C 0 C 0 s canFam3.chr24 47668137 108 + 47698779 ACCACAGCCTAGATGTCAAAGC-AAGGATTGATAGGCACAC--AGTAGGGGAAATAG----AATCAGCCCCTGAGGGAACATTAT--AGCTGA--GGTGGAGGG--AGAGCTGGCAGGAGA i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 353660 113 - 397369 GCTGCAGAGTGGATGGAAAACCTAAGAATAAGCAGGCATAGGGGGAGGGAGA-ATGGCAGAAATTGACATCTTGGGGA-CACCCCTAGGCTAGATGGGAG------AGAGACTGGGAAAGT i dasNov3.JH569290 I 13414 C 0 e micMur3.chr18 56932439 1924 + 57149010 I a score=822553.000000 s hg38.chr20_KI270870v1_alt 180321 85 + 183433 AAAGAGCTGCGGAGGTCAGAGGGAGCGGCTGTGCCTTGGGCCAGGGGAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCAGACTCCTT s panTro5.chr20 66516612 85 + 66533130 AAAGAGCTGCGGAGGTCAGAGGGAGCGGCGGTGCCTTGGGCCAGGGGAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCAGACTCCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181682 85 + 62195757 AAAGAGCTGCGGAGGTCAGAGGGAGCGGCGGTGCCTTGGGCCAGGGGAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCAGACTCCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568355 85 - 578057 aaagagctgcggaggtcagagggaGCGGCTGTGCCTTGGGCCAGGGGAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCAGACTCCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090069 85 - 110113093 aaagagctgcgagggtcaga-ggaGCGGCTGTGCCTTGGGCCAGGGGAGCAGTGAG--CCACGTTGCTTATCCCCAAGCAGACTCCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829851 85 - 92844088 aaAGAGCTGTGGAGGTCAGAGGGAGCGGCTGTGCCTTGGGCCAGGGTAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCCGACACCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495519 85 + 96509753 aaAGAGCTGTGGAGGTCAGAGGGAGCGGCTGTGCCTTGGGCCAGGGTAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCCGACACCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965480 85 - 16982598 aaagagctgtggaggtcagagggaGCGGCTGTGCCTTGGGCCAGGGTAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCCGACACCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767442 85 - 3785965 aaagagctgtggaggtcagagggaGCGGCTGTGCCTTGGGCCAGGGTAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCCGACACCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357475 85 - 90373283 aaagagctgtggaggtcagagggagcggcTGTGCCTTGGGCCAGGGTAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCCGACACCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158052 85 - 179258 aaagagctgtggaggtcagagggaGCGGCTGTGCCTTGGGCCAGGGTAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCCGACACCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627373 85 - 5823884 aaagagctgtggaggtcagagggaGCAGCTATGCCTTGGGCCAGGGTAGCAGTGAG--CCACGTTCCTTAT-CCCAAGCCGACGCCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58185072 86 + 159171411 AAAGAGCTGTGGAGATCAGAGAGA-GGGCTGTGACTTGGGCCAGGGGAGCAGCGAGCACTGGGTTCCTTAT-CCCAAGCCGACACCTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347890 87 + 16356641 AAAGAGCTGTGGAGATCAGAGAGAGGGGCTGTGACTTGGGCCAGGGGAGCAGTGAGCACCACGTTCCTTAT-CCCAAGCCGACACCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221643 87 + 1231380 AAAGAGCTGTGGAGATCAGAGAGAGGGGCTGTGACTTGGGCCAGGGGAGCAGTGAGTGCCACGTGCCTTAT-CCCAAGCCGACACCTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2748419 86 + 11732439 AAAGAGCTATGGAGATCAGAGAGAGGGGCTGTGACTTGGGCCAGGGGAGCAGTGAGCTCCATGTT-CTTAT-CCCAAGCCGACATCTT i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22922971 82 + 22939663 GATGAGCAGGGGAAGTTCGAGGAAGAGG--GTGACGTAGGCT-GGGGAATGGCAAG--TCAAGTTAGCTGT-CTCAAGCAGGCATTTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854091 67 + 182113224 ----AGTC----AAGTCATAGAGAAGGGCTGTGAACCTGGCCA------TAGTGAA--CTGCATCAGTTTT-CCTA----GTGGCCCT i mm10.chr2 C 0 I 3 s canFam3.chr24 47668245 37 + 47698779 ------------------------------------------------GAATTGGG--CCAAGTCCGTTCC-CTTCCAGCGGCACCTG i canFam3.chr24 C 0 I 2 s dasNov3.JH569290 353773 46 - 397369 ------------GAGTCAGTGGGAGAAGCTGTGACTCAGGT---AGGAGCAGTGAC----------CTGAT----------------- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928413 83 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I a score=825024.000000 s hg38.chr20_KI270870v1_alt 180406 74 + 183433 GGAGATCTGGAGAGGCCGG-AGCTGAGGG-CCGGGACCCCGA-GGGCCTCGGAAGGAGTTGTTTCAGCCTCTTGGGG s panTro5.chr20 66516697 74 + 66533130 GGAGATCTGGAGAGGCCGG-AGCTGAGGG-CCGGGACCCCGA-GGGCCTCGGAAGGAGTTGTTTCAGCCTCTTGGGG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181767 74 + 62195757 GGAGATCTGGAGAGGCCGG-AGCTGAGGG-CCGGGACCCCGA-GGGCCTCGGAAGGAGTTGTTTCAGCCTCTTGGGG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568440 74 - 578057 GGAGATCTGGAGAGGCCAG-AGCTGAAGG-CCGGGACCCCGA-GGGCCTCGGAAGGAGTTCTTTCAGCCTCTTGGGA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090154 76 - 110113093 GGAGATCTGGAGAGGCCAG-AGCTGAAGGCCCGGGACCCTGAGGGGCATTGGAAGGAGTTGTTTCAGCCTCTGGGGG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92829936 74 - 92844088 GGCGATCTGGAGAGGCCAG-AGCTGAAGG-CTGGGACCCTGA-GGGCCTCGGAAGGAGTTGTTTCAGCCTTTTGGGG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495604 74 + 96509753 GGCGATCTGGAGAGGCCAG-AGCTGAAGG-CTGGGACCCTGA-GGGCCTCGGAAGGAGTTGTTTCAGCCTTTTGGGG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965565 74 - 16982598 GGCGATCTGGAGAGGCCAG-AGCTGAAGG-CTGGGACCCTGA-GGGCCTCGGAAGGAGTTGTTTCAGCCTTTTGGGG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767527 74 - 3785965 GGCGATCTGGAGAGGCCAG-AGCTGAAGG-CTGGGACCCTGA-GGGCCTCGGAAGGAGTGGTTTCAGCCTTTTGGGG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357560 74 - 90373283 GGAGATCTGGAGAGGCCAG-AGCTGAAGG-CTGGGACCCTGA-GGGCCTCGGAAGGAGTTGTTTCAGCCTTTTGGGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158137 74 - 179258 GGCGATCTGGAGAGGCCAG-AGCTGAAGG-CTGGGACCCTGA-GGGCCTCGGAAGGAGTTGTTTCAGCCTTTTGGGG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627458 74 - 5823884 GGAGATCTGGAGAGGCCAG-AGCTGAAGG-CTGGGACCCTGA-GGGCCTCGGAAGGAGTTGTTTCAGCCTCTTGGGG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58185158 70 + 159171411 -GAGATCTAGGGAGGCCAA-AGCTGAAGA-T--GAACTCTGA-GGACTTCGGAAGGAGTTGTTTCAGCCTCT-GGGG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16347977 72 + 16356641 -GAGATCTAGGGAGGCCAA-AGCTGAAGA-CTGGGACTCTGA-GGGCTTCGGAAGGAGTTGTTTCAGCCTGT-GGGG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221730 72 + 1231380 -GAGATCTAGGGATGCCAA-AGCTGAAGA-CTGGGACTCTGA-GGGCTTCAGAAGGAGTTGTTTTAGCCTCT-GGGG i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2748505 72 + 11732439 -GAGATCTAGGGAGGCCAA-AGCTGAAGA-CTGGGACTCTGA-GGGCTTCGGAAGGAGTTGTTTCAGCCTCT-GGGG i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1928496 74 - 2029793 GGAGAGCTGGGGAGGTCAG-AGCTGATAG-TCGGGAGTCCGA-AGGCCTAGGAAGGAGTTATTTCAGCATCTTGGGG i proCoq1.NW_012150197v1 I 83 I 312 s otoGar3.GL873542 22923053 69 + 22939663 GGAGAGCTGGAGGTGTCAA-AGCTTA-----CAAGAGTCT-A-TGGCCTAGGAAGGAATCATTTCAGCATTTTTGAG i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181854161 74 + 182113224 AGAAAGCTGGACAGGTCAG-AGCTGATAC-TTGGGAACCCAG-TGGCCAGCGATGAGACTGTTTTAGCATCTTGGGG i mm10.chr2 I 3 C 0 s canFam3.chr24 47668284 64 + 47698779 GGAGAGCCAGAGAGGCCAGCATTTGGTGG-CCGGAGGTCTGG-CCACCCGTGAAGGAGTCGGTTCA----------- i canFam3.chr24 I 2 C 0 s dasNov3.JH569290 353819 34 - 397369 ---------------------------------GGAGGATGG-AGGCGGGGGAAGGGATCTTTTAAGC--------- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56932439 1924 + 57149010 I a score=2590172.000000 s hg38.chr20_KI270870v1_alt 180480 273 + 183433 CAACAGCCAGATCCCAGTGGCTCTGG--AAGTAATCTGTCTAGATGTGAGATGATGAAGGAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCCGGGTCACAGATGGGGCAAGAGGCACGATCGTGGTGTTGAGTGAAGAGAAAGGACTGAAGACAAAGGAAGTGCCGGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCTGTGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTTACTCACTACCAGGGGCCTGGGACAC s panTro5.chr20 66516771 273 + 66533130 CAACAGCCAGATCCCAGTGGCTCTGG--AAGTAATCTGTCTAGATGTGAGATGATGAAGGAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCCGGGTCACAGATGGGGCAAGAGGCACGATCGTGGTGTTGAGTGAAGAGAAAGGATTGAAGACAAAGGAAGTGCCAGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCCGTGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTTACTCACTACCAGGGGCCTGGGACAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62181841 272 + 62195757 CAACAGCCAGATCCCAGTGGCTCTGG--AAGTAATCTGTCTAGA-GTGAGATGACGAAGGAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCCGGGTCACAGATGGGGCAAGAGGCACGATCGTGGTGTTGAGTGAAGAGAAAGGATTGAAGACAAAGGAAGTGCCAGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCCGTGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTTACTCACTACCAGGGGCCTGGGACAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568514 269 - 578057 CAACAGCCAGATCCCAGTGGCTCTGG--AAATAATCTTTCTAGATGTGAGATGATGAAGGAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCCAGGTCACAGATGGGGCAAGAGGCACGATCGTGGTGTTGAGTGAAGAGAAAGGACTGAAGACAAAGGAAGTGCCGGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCCGTGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTT----ACTACCAGGGGCCTGGGACAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090230 269 - 110113093 CAACAGCCAGATCCCAGTGGCTCTGG--AAGTAATCTTTCTAGATGTGAGATGATGAAGGAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCCGGGTCACAGATGGGGCAAGAGGCACGATCGTGGTGTTGAGTGAAGAGAAAGGACTGAAGACAAAGGAAGTGCCGGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTGTTGTCCGTGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTG----ACTACCAAGGGCCTGGGACAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830010 264 - 92844088 CAACAGCTAGATCCTAGT-GCTCTGG--AAGTAATCTTTCTGGATGTGAGATGAT----GAAGGAAGGATGGCTC-TACTTGAAGAGGGAGCTGGGTCACAGATGGGGCAAGAGGCATGATCGTGTTGTTTGGTGAGGAGACAGGATTGAAGACAAAGGAAGTGCCAGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCCGTGGAGTCAGAAAAACAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTT----ACTGCCAAGGACCTGGGACAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495678 264 + 96509753 CAACAGCTAGATCCTAGT-GCTCTGG--AAGTAATCTTTCTGGATGTGAGATGAT----GAAGGAAGGATGGCTC-TACTTGAGGAGGGAGCTGGGTCACAGATGGGGCAAGAGGCATGATCGTGTTGTTTGGTGAGGAGACAGGATTGAAGACAAAGGAAGTGCCAGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCCGTGGAGTCAGAAAAACAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTT----ACTGCCAAGGACCTGGGACAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965639 264 - 16982598 CAACAGCTAGATCCTAGT-GCTCTGG--AAGTAATCTTTCTGGATGTGAGATGAT----GAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCTGGGTCACAGATGGGGCAAGAGGCATGATCGTGTTGTTTGGTGAGGAGACAGGATTGAAGACAAAGGAAGTGCCAGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCCGTGGAGTCAGAAAAACAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTT----ACTGCCAAGGACCTGGGACAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767601 264 - 3785965 CAACAGCTAGATCCTAGT-GCTCTGG--AAGTAATCTTTCTGGATGTGAGATGAT----GAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCTGGGTCACAGATGGGGCAAGAGGCATGATCGTGTTGTTTGGTGAGGAGACAGGATTGAAGACAAAGGAAGTGCCAGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCTGTGGAGTCAGAAAAACAG------GGAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTT----ACTGCCAAGGACCTGGGACAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357634 264 - 90373283 CAACAGCTAGATCCCAGT-GCTCTGG--AAGTAATCTTTCTGGATGTGAGATGAT----GAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCTGGGTCACAGATGGGGCAAGAGGCATGATTGTGTTGTTTGGTGAGGAGACAGGATTGAAGACAAAGGAAGTGCCAGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCCGTGGAGTCAGAAAAACAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTT----ACTGCCAAGGACCTGGGACAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158211 264 - 179258 CAACAGCTAGATCCTAGT-GCTCTGG--AAGTAATCTTTCTGGATGTGAGATGAT----GAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCTGGGTCACAGATGGGGCAAGAGGCATGATCGTGTTGTTTGGTGAGGAGACAGGATTGAAGACAAAGGAAGTGCCAGAGCCT-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCTGTGGAGTCAGAAAAACAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTT----ACTGCCAAGGACCTGGGACAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627532 263 - 5823884 CAACAGCTAGATCCCAGT-GCTCTGG---AGTCATCTTTCTAGATGTGAGATGAT----GAAGGAAGGATGGCTG-TACTTGAGGAGGGAGCTGGGTCACAGATGGGGCAGGAGGCATGATTGTGGTGTTCGGTGAGGAGACAGGATTGAAGACAAAGGAAGTGCCAGAGCCC-GTCCTGGAGAAAGGAGAAGGGACCTCTTGTCGGTGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTT----ACTGCCTTGGGCCTGGGACAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58185228 257 + 159171411 CAACAG-CAGATCCCAGTGGCTCTGG--AAATAATCTTTTTTGTTGTGAGATGATGAAGGAAGGAAGGATGACAG-TACTTGAGGAAGGAGCTGGGTCACAGATGGGGCAAGAGGCATGATCGTGTGGTTCAATGAAGAGAC----------------GAAGTGCTGGAGCCT-ATCCTGGAGAAAGGATATGGGACCTCTTGCCTCTGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GGAAAGGTGTCTACTTATTCAGTGCCAAGAGCCCGGGACAC i calJac3.chr5 C 0 I 4 s saiBol1.JH378156 16348049 257 + 16356641 CAGCAGCCAGATCCCAGTGGCTCTGG--AAATAATCTTTCTTGATGTGAGGTGAT----GAAGGAAGGATGACAA-TACTTGAGGAAGGAGCTAGGTCACAGGTGGGGCAAGAGGCATGATTGTGTGGTTCAATGAAGAGAC------------AAGGGAAGTGCTGGAGCAT-GTCCTGGAGAAAGGATAAGGGACCCCTTGCCCATGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CAACTTATTCAGTGCCAAGAGCCCAGGACAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1221802 257 + 1231380 CAACAGCCAGATCCCAGTATCTCTGG--AAATCATC----TTGATGTGAGATGATGAAGGAAGGAAGGACGACAG-TACTTGAGGAAGGAGCTGGGGCACAGATGGGGCAAGAGGCATGATCGTGTGATTCAATGAAGAGAC------------AAAGGAAGTGCCAGAGCAT-GTCCTGGAGAAAGGATAAGGGACCCCTTGCCCATGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTTATTCAGGGCCAAGAGACCGGGACAC i cebCap1.NW_016107870v1 C 0 I 4 s aotNan1.NW_018500483v1 2748577 261 + 11732439 CAACAGCCAGATCCCAGTGGCTCTGG--AAATAATCTTTCTTGATGTGAGATGATGAAGGAAGGAAGGATGACAG-TACTTGAGGAAGGAGCTGGGTCACAGATGGGGCAAGAGGCATGATCGTGTGGTTCAACGAAGAGAC------------AAAGGAAGTGCTGGAGCCT-GTCCTGGAGAAAGGATAAGGGACCCCTTGACCATGGAGTCAGAAAAGCAG------GAAAG----------GT-----T------------G----------A----AGG--GAGAAGGTG-CTACTTATTCAGTGCCAAGAGCCCGGGACAC i aotNan1.NW_018500483v1 C 0 I 4 s otoGar3.GL873542 22923123 238 + 22939663 CAACAGCGAGATCTCAGTGGCTTGTG--AAATAATT----TGGAGGTAAGGCGAT-----AAGGAAGGATGATTGCTATTTGAGGA----------------------CAAGAGA-----------TGCTCAGTGGAAGGGCAGGATTGAAGATGAAGGAACTGTTGAAGCCT-GTCCTGGAGAAGGGAGAAGGGACCCCTTGTCTTCAGAGGCAGAAAAGCAGGTGAGAGAAAG----------GT-----TGGTGTTAATAGAG----------G----AGG--GAGAAAGTG-CT--TT----------AAGAGCCAGGGCCAC i otoGar3.GL873542 I 1 C 0 s mm10.chr2 181854235 261 + 182113224 AAACAGCTGGATTGCAAATGTTCCGG--AACTAATCTTTTCTTAATTGAGTTGGT----GAGAGCAGGATATATA-TAGTACAGG-------TAATTTGTTGTTGAGAGACAAGGCCTTAAC----TGCTCAGTAGAATGACAGGAT-----GCAGGCAGGGTACCATAGCTTCATCTTGCAGAGAGAACACATG--CCTATGTTCTCAGGGACAAAAGAAAAG---AGAGAAGG----------GT-----T------------GGTGCCTCAAAA----AGATTGGGGAGACG-CTGTTT----GTTGTTA-GAACCTTGTCTA- i mm10.chr2 C 0 C 0 s canFam3.chr24 47668348 174 + 47698779 --ACAGACTGA------------------------------------GGGGTGAG----CAAGGAAAGGTGGGTG-TA------------------------GTGAGCGGAGAGTCATGGTTGTGGTGTTGCGTCATGGGGC-----------------AAGTGCTGGAGCCT-GTTTTGGACAACAAGGAGGAGA--------TGGTTGAG-CAGGAGAGGAG------GCCTG----------GTGTGGAC------------A----------C----AGG--GAGAAGGTG-CT--------------GAGAGCCCGGGGCCC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 353853 223 - 397369 ---------AGTGTCAGG-GCTCTGGAGAAATCATCTTTCTAGAAGTTGGGTGGTGAAGAAAGGAAAGGTGGCAG--ATTTGAGGAGGAATTCA----------------------------GTGCTGTTCAGCGGAGGGGCAGGAT-------------------AAAACCA-GTCCCAGGGAA-GGAGCAGGGGCAGCTTGTTCCTTGAGACAGAAGAGTGG------GATAGAAGCATTGGTGT-----G------------G----------ATAATGGG--GAGAGGGGG-AGATCG-------GATAGTGACCTTTAATGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928570 312 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I a score=559850.000000 s hg38.chr20_KI270870v1_alt 180753 73 + 183433 AAGCCTGTTTGAG--G---GTTTCTGAAGAACAGTGGA-------GA-TGC-TGAGATTCTGTGCAGGCCTTTCTGACTTT------GGTAAT s panTro5.chr20 66517044 73 + 66533130 AAGCCTGTTTGAG--G---GTTTCCGAAGAACAGTGGA-------GA-TGC-TGAGATTCTGTGCAGGCCTTTCTGACTTT------GGTAAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182113 73 + 62195757 AAGCCTGTTTGAG--G---GTTTCCGAAGAACAGTGGA-------GA-TGC-TGAGATTCTGTGCAGGCCTTTCTGACTTT------GGTAAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568783 73 - 578057 AAGCCTGTTTGAG--G---GTTTCCGAAGAACAGTGGA-------GA-TGC-TGAGATTCTGTACAGGCCTTTCTGACTTT------GGTAAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090499 74 - 110113093 AAGCGTGTTTGAG--G---GTTTCCAAAGAACAGTGGA-------GATTGC-CGAGACTCTGTGCAGGCCTTTCTGACTTT------GGTGAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830274 67 - 92844088 AAGCCTGTTTGAG--G---GTTTCCGAAGAACAGTGGA-------GA--------GAATCTCTGCAGGCCTTTCTGATTTT------GGTGAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96495942 67 + 96509753 AAGCCTGTCTGAG--G---GTTTCCGAAGAACAGTGGA-------GA--------GAATCTCTGCAGGCCTTTCTGATTTT------GGTGAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965903 67 - 16982598 AAGCCTGTTTGAG--G---GTTTCCGAAGAACAGTGGA-------GA--------GATTCTCTGCAGGCCTTTCTGATTTT------GGTGAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767865 67 - 3785965 AAGCCTGTTTGAG--G---GTTTCTGAAGAACAGTGGA-------GA--------GATTCTCTGCAGGCCTTTCTGATTTT------GGTGAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357898 67 - 90373283 AAGCCTGTTTGAG--G---GTTTCCGAAGAACAGTGGA-------GA--------GATTCTCTGCAGGCCTTTCAGATTTT------GGTGAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158475 67 - 179258 AAGCCTGTTTGAG--G---GTTTCCGAAGAACAGTGGA-------GA--------GATTCTCTGCAGGCCTTTCTGATTTT------GGTGAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627795 74 - 5823884 AAGCCTGTTGGAG--G---GTTTCCGAAGAACAGTGGAGATGGCCGA--------GATTCTCTGCAGGCCTTTCTGATTTT------GGTGAT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58185489 76 + 159171411 AAGCCTGTCTGAGACA---GTTTCCAAAGAACAGTGAC-------GATTGC-TGAGATTCAGTGCAGGCCTCTCTGATTTT------GGTAAT i calJac3.chr5 I 4 I 297 s cebCap1.NW_016107870v1 1222063 74 + 1231380 AAGCCTGTTTGAG--G---GCTTCCAAAGAACAATGAT-------GATTGC-TGAGATTCTGTGCAGGCCTCTCTGATTTT------GGTAAT i cebCap1.NW_016107870v1 I 4 I 308 s aotNan1.NW_018500483v1 2748842 74 + 11732439 AAGCCTGTTTGAA--G---GTTTCCAAAGAACAATGAT-------GATTGC-TGAGATTCTGTGCAGGCCTCTCTGATTTT------GGTAAT i aotNan1.NW_018500483v1 I 4 I 301 s otoGar3.GL873542 22923361 67 + 22939663 AAACATA---GAG--G---ACTCCCATAGAACAGCAGA-------GATTAC-CAAGATTCTGTGCAGGCTC----AATTTT------GGTAAT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854496 72 + 182113224 ATGACAGTTCTTG--C---ATTTCTGCAGGGCAGAAGA-------TATTGG-TG-GGTTCTAGACAGGGGT-TATGATTTT------GGTTAC i mm10.chr2 C 0 C 0 s canFam3.chr24 47668522 73 + 47698779 CGGTGCTTCCCAG--G---GCTCCTGTGGAACAGGGAG-------CATTGCACAGGATTCTGTGTAGGCCTCTCTGATAT--------GTATT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 354076 67 - 397369 ---TCTGGTTGAG--GTGAGTCCCTGCCGAGAGCTGAG-------GA--------------GCACAGGTGTGTTGGATGCTCCCAAAGGTGAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928570 312 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e saiBol1.JH378156 16348306 0 + 16356641 C a score=57386.000000 s hg38.chr20_KI270870v1_alt 180826 13 + 183433 AAACGTTGTGCAC s panTro5.chr20 66517117 13 + 66533130 AAACGTTGTGCAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182186 13 + 62195757 AAACGTTGTGCAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568856 13 - 578057 AAATGCTGTGCAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090573 10 - 110113093 AAA---TGTGCAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830341 10 - 92844088 AAA---TGTGTAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496009 10 + 96509753 AAA---TGTGTAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965970 10 - 16982598 AAA---TGTGTAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767932 10 - 3785965 AAA---TGTGTAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357965 10 - 90373283 AAA---TGTGTAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158542 10 - 179258 AAA---TGTGTAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627869 10 - 5823884 AAA---TGTGTAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58185862 13 + 159171411 aaaTGTTGTGCAC i calJac3.chr5 I 297 C 0 s cebCap1.NW_016107870v1 1222445 13 + 1231380 aaaTGTTGTACAC i cebCap1.NW_016107870v1 I 308 C 0 s aotNan1.NW_018500483v1 2749217 13 + 11732439 aaaTGTTGTACAC i aotNan1.NW_018500483v1 I 301 C 0 s otoGar3.GL873542 22923428 13 + 22939663 TAATGTTGTTGAC i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854568 13 + 182113224 AAATGTTGCTGAT i mm10.chr2 C 0 C 0 s canFam3.chr24 47668595 13 + 47698779 AACTGTTACAGTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 354143 9 - 397369 GAACCTTAT---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928570 312 - 2029793 I e micMur3.chr18 56932439 1924 + 57149010 I e saiBol1.JH378156 16348306 0 + 16356641 C a score=192891.000000 s hg38.chr20_KI270870v1_alt 180839 15 + 183433 AACACAAGAGCTCTC s panTro5.chr20 66517130 15 + 66533130 AACACAAGAGCTCTC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182199 15 + 62195757 AACACAAGAGCTCTC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568869 15 - 578057 AACACAAGAGCTCTC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090583 15 - 110113093 AACACAAGAGCTCTC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830351 15 - 92844088 AACACAAGAGCTCTC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496019 15 + 96509753 AACACAAGAGCTCTC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965980 15 - 16982598 AACACAAGAGCTCTC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767942 15 - 3785965 AACACAAGAGCTCTC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357975 15 - 90373283 AACACAAGAGCTCTC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158552 15 - 179258 AGCACAAGAGCTCTC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627879 15 - 5823884 AACACAAGTGCTCTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58185875 15 + 159171411 AACACAAGAGCGCTT i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1222458 15 + 1231380 AACACAAGAGCGCTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749230 15 + 11732439 AACACAAGAGCACTC i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1928882 15 - 2029793 AACACAAGAGCCCTT i proCoq1.NW_012150197v1 I 312 C 0 s otoGar3.GL873542 22923441 15 + 22939663 AGCACAGGAACTCTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854581 15 + 182113224 AGCATGAGAGTCCCT i mm10.chr2 C 0 C 0 s canFam3.chr24 47668608 15 + 47698779 AACCTACGAGTCCTC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 354152 14 - 397369 -CTGCAAGACCTTTC i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56932439 1924 + 57149010 I e saiBol1.JH378156 16348306 0 + 16356641 C a score=70391.000000 s hg38.chr20_KI270870v1_alt 180854 5 + 183433 CCTAT s panTro5.chr20 66517145 5 + 66533130 CCTAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182214 5 + 62195757 CCTAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568884 5 - 578057 CCTAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090598 5 - 110113093 CCTAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830366 5 - 92844088 CCTGT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496034 5 + 96509753 CCTGT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16965995 5 - 16982598 CCTGT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767957 5 - 3785965 CCTGT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357990 5 - 90373283 CCTGT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158567 5 - 179258 CCTGT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627894 5 - 5823884 CCTGT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58185890 5 + 159171411 TCTGT i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1222473 5 + 1231380 TCTGT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749245 5 + 11732439 TCTAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56934363 5 + 57149010 CCTAT i micMur3.chr18 I 1924 C 0 s proCoq1.NW_012150197v1 1928897 5 - 2029793 CCTAC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22923456 5 + 22939663 CCTGT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854596 5 + 182113224 TCTGT i mm10.chr2 C 0 I 15 s canFam3.chr24 47668623 5 + 47698779 CCTGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 354166 5 - 397369 CCTCT i dasNov3.JH569290 C 0 C 0 e saiBol1.JH378156 16348306 0 + 16356641 C a score=980314.000000 s hg38.chr20_KI270870v1_alt 180859 92 + 183433 AGTGCAGACTGTTATTATTT---GGAGAAGTTGAGTACTGGAGGG--GAAAAGTGATGCTGATTT-----------------------------------TCAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATG---------------------- s panTro5.chr20 66517150 92 + 66533130 AGTGCAGACTGTTATTATTT---GGAGAAGTTGAGTACTGGAGGG--GAAAAGTGATGCTGATTT-----------------------------------TCAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATG---------------------- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182219 92 + 62195757 AGTGCAGACTGTTATTATTT---GGAGAAGTTGAGTACTGGAGGG--GAAAAGTGATGCTGATTT-----------------------------------TCAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATG---------------------- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568889 92 - 578057 AGTGCAGACTGTTATTATTT---GGAGAAGTTGAGTACTGGAGGG--GAAAAGTGATGTTGATTT-----------------------------------TCAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATG---------------------- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090603 90 - 110113093 AGTGCAGAC--TTATTCTTT---GGAGAAGTTGAGTAGTGGAGGG--GAAAAGTGATGCTGATTT-----------------------------------TCAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATA---------------------- i nomLeu3.chr13 C 0 I 2 s rheMac8.chr10 92830371 127 - 92844088 AATGCAGACTGTTGTTCTTT---GGAGAAGTGGAGTACTGGAGGG--GAAAAGTGATGCTGATTTACTTTTATTAATGATATATAATTAATACTAAACTATAAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATA---------------------- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496039 127 + 96509753 AATGCAGACTGTTGTTCTTT---GGAGAAGTGGAGTACTGGAGGG--GAAAAGTGATGCTGATTTACTTTTATTAATGATATATAATTAATACTAAACTATAAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATA---------------------- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966000 127 - 16982598 AATGCAGACTGTTGTTCTTT---GGAGAAGTGGAGTACTGGAGGG--GAAAAGTGATGCTGATTTACTTTTATTAATGATATATAATTAATACTAAACTATAAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATA---------------------- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3767962 127 - 3785965 AGTGCAGACTGTTGTTCTTT---GGAGAAGTGGAGTACTGGAGGG--GAAAAGTGATGCTGATTTACTTTTATTAATGATATATAATTAATACTAAACTATAAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATA---------------------- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90357995 127 - 90373283 AGTGCAGACTGTTGTTCTTT---GGAGAAGTTGAGTACTGGAGGG--GAAAAGTGATGCTGATTTACTTTTATTAATGATACATAATTAATACTAAACTATAAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATA---------------------- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158572 127 - 179258 AGTGCAGACTGTTGTTCTTT---GGAGAAGTGGAGTACTGGAGGG--GAAAAGTGATGCTGAGTTACTTTTATTAATGATATATAATTAATACTAAACTATAAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATA---------------------- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5627899 127 - 5823884 AGTGCAAACTGTTGTTCTTT---GGAGAAGTTGAGTACTGGAGGG--TAAAAGTGATGTTGATTTACTTTTATTAATGATATATAATTAATACTAAACTATAAGTTTAATGTAATTT---------------TCCCTTTG------AGAAATA---------------------- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58185895 93 + 159171411 AGTGCAGAC--TTGTTCTTT---GGAGAAGCTGAGTACTGTAGGG--GAAAAGCTATGCTGATTT-----------------------------------TTAGTTTAATGTAATTT--------CTT----TGCCTTTG------AGAAATA---------------------- i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1222478 94 + 1231380 AGTGCAGACTGTTACTCTTT---GGAGAAGTTAAGTCCTGTA-GG--GAAAAGCGATGCTGTTTT-----------------------------------TCTGTTTAATGTAATTT--------CTC----TCCCTTTG------AGAAATA---------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749250 94 + 11732439 AGTGCAGACTGTTATTCTTT---GGAGAAGTTGAGTTCTGTG-GG--GAAAAGTGATGCTGATTT-----------------------------------TCCGTTTAATGTAATTT--------CTT----TCCCTTTG------AGAAATA---------------------- i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56934368 95 + 57149010 AGTGTAGACTGTTTTTCTTT---GGAGATGTTGGGTACTGGAAGG--AAAAAGTGATGCTGATTT-----------------------------------TCAGTTTAATGTAATTT--------CTT----TCCCTTTG------AGAAATG---------------------- i micMur3.chr18 C 0 I 20 s proCoq1.NW_012150197v1 1928902 95 - 2029793 AGTGCAGACTGTTTTTCTTT---GGAGATGTTGGATACTGGAAGG--AAAAAGTGATGCCGATTT-----------------------------------TCAGTTTAATGTAATTT--------CTT----TCCCTTTG------AGAAATG---------------------- i proCoq1.NW_012150197v1 C 0 T 4415 s otoGar3.GL873542 22923461 95 + 22939663 AGTACAGACTGTTTTTCTTT---AAAGACATTAGGTAGTAGAGGG--AAAATATAATGGTAATTT-----------------------------------TCAGTTCAAAGTGATTT--------TTT----GCCCTTTG------AGAAAAG---------------------- i otoGar3.GL873542 C 0 I 8 s canFam3.chr24 47668628 118 + 47698779 ATTGTACATGGTCTTCTTTTTGGGGAGAAGTTAGGTACTGGAGGGAAAAAAAGTGATGGTGGCTT-----------------------------------TGAGTATACTGTATTTAACACACAACTCCTAATCCCTCCGCATTCAAGACAAA---------------------- i canFam3.chr24 C 0 I 21 s dasNov3.JH569290 354171 93 - 397369 ---------------------------ATGT----TACTGGAGGG--CAAAGATGATCCTGACGT-----------------------------------CCAGCACATAACCACTC----ATTCCTT----TTACTTGG------AGAAAAGTCCTTTTATTGCCACATTTGTA i dasNov3.JH569290 C 0 C 0 e mm10.chr2 181854601 15 + 182113224 I e saiBol1.JH378156 16348306 0 + 16356641 C a score=1179426.000000 s hg38.chr20_KI270870v1_alt 180951 111 + 183433 TTGCCTGCATGAAATCG---TGAGC-----TTTAATTGTCAAATGTTCTTTCTCCTTGGTGTGCTTTGGAGTTTTTG-TTTTTCCTG-AAAAATG-TTTGGA-TTTGCATTTCCCTACTTTAA s panTro5.chr20 66517242 111 + 66533130 TTGCCTGCATGAAATTG---TGAGC-----TTTAATTGTCAAATGTTCTTTCTCCTTGGTGTGCTTTGGAGTTTTTG-TTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCCCTACTTTAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182311 111 + 62195757 TTGCCTGCATGAAATTG---TGAGC-----TTTAATTGTCAACTGTTCTTTCTCCTTGGTGTGCTTTGGAGTTTTTG-TTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCCCTACTTTAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 568981 111 - 578057 TTGCCTGCATGAAATTG---TGAGC-----TTTAATTGTCAAATGTTCGTTCTCCTTGGTGTGCTTTGGAGTTTTTG-TTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCCCTACTTTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090695 112 - 110113093 TTGCCTGCATGAAATCG---TCAGC-----TTTAATTGTCAAATGTTCTTTCTCCTTGGTGTGCTTTGGAGTTTTTGTTTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCCCTACTTCAG i nomLeu3.chr13 I 2 C 0 s rheMac8.chr10 92830498 111 - 92844088 TTGCCTGCATGAAATTG---TGAGC-----TTTAATTGTCAAATGTTCTTTCTCCTTGGTGTGCTTTAGAGTTTTTG-CTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCTGTACTTTAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496166 111 + 96509753 TTGCCTGCATGAAATTG---TGAGC-----TTTAATTGTCAAATGTTCTTTCTCCTTGGTGTGCTTTAGAGTTTTTG-CTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCTGTACTTTAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966127 111 - 16982598 TTGCCTGCATGAAATTG---TGAGC-----TTTAATTGTCAAATGTTCTTTCTCCTTGGTGTGCTTTAGAGTTTTTG-CTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCTGTACTTTAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768089 111 - 3785965 TTGCCTGCATGAAATTG---TGAGC-----TTTAATTGTCAGATGTTCTTTCTCCTCGGTGTGCTTTAGAGTTTTTG-CTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCTGTACTGTAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358122 111 - 90373283 TTGTCTGCATGAAATTG---TAAGC-----TTTAATTGTCAAATGTTCTTTCTCCTTGGTGTGCTTTGGAGTTTTTG-CTTTTTCTG-AAAAATG-TTTGGA-TCTGCATTTCTGTACTTTAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158699 111 - 179258 TTGCCTGCATGAAATTG---TGAGC-----TTTAATTGTCAAATGTTCTTTCTCCTTGGTGTGCTTTAGAGTTTTTG-CTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCTGTACTTTAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628026 106 - 5823884 TTGCCTGCATGAAATTG---TGAGC-----TTTAATTGTCAAATGTTCTTTCTCCTTGGTGTG-----GAGTTTTTG-CTTTTTCTG-AAAAATG-TTTGGA-TTTGCATTTCTGTACTTTAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58185988 110 + 159171411 TTGCCAGCATGAAATTG---TGAGC-----TTTAATTGTCAAA---TCTTTCTCCTAAAAGTGCTTTGATGTTTCTTTTTTTTTCTGAAAAAATG-TTTGGA-TTTGCATTTTCCTACTTTAC i calJac3.chr5 C 0 C 0 s cebCap1.NW_016107870v1 1222572 108 + 1231380 CTGCCAGCATGAAATTG---TGAGC-----TTCAATTGTCAAA---TCTTCCTCCTAAGAGTGCTTTGGTGTG--TGTTTTTTTCTGAAAAAATG-TTTGGA-TTTGCATTTTCCTACTTTAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749344 105 + 11732439 TTGCCAGCATGAAATTG---TGAGC-----T----TTGTCAAA---TCTTTCTCCTAAAAGTGCTTTGGTGTTTCTG-TTTTTTCTAAAAAAAAG-TTTGGA-TTTGCATTTTCCTACTTTTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56934483 116 + 57149010 TTGCCTGCACTAAATAG---TAAGCTTTAATTTAATTGCCAAGTGTTCTTTCGCCTTGGTGTGCTTTGAGGTTTTTG--TTTTTCTT-AAAAATA-TTTGGGTTTTGCATTTCCCTACTTTCA i micMur3.chr18 I 20 C 0 s otoGar3.GL873542 22923564 104 + 22939663 TTGCTTGTATTAAGTAG---TGAGC-----TTTAATTGCCAAATGTTCTTTTTCCTCAGTGTACTTTGAG------G--TTTTCCTT-TAAAATG-ATTGGG-TTTGCATTTCTCTGCTTTAA i otoGar3.GL873542 I 8 C 0 s canFam3.chr24 47668767 111 + 47698779 CCACCTGCATTAAATTGAGCTGGAC-----TTTAATCACCAGATTTTATTTTTCCTTAGTAGGCTTTGGAGTTTTTG-TACTTATTA-AAAATGT-TTTGGA-TTTGCTTTTCTCTAATA--- i canFam3.chr24 I 21 C 0 s dasNov3.JH569290 354264 113 - 397369 TTGCCTGCATAAAATTG---TGAGCTCTCTTTTAATTGCCAGATTTTATGTCTCCTTGGTGTCTTTTGGGGTTTTTG-TTATT-----AAAAATGTTTTAGG-TTTGCTCTTCTCTACTTAAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e mm10.chr2 181854601 15 + 182113224 I e saiBol1.JH378156 16348306 0 + 16356641 C a score=590324.000000 s hg38.chr20_KI270870v1_alt 181062 45 + 183433 TAAAAATGGAGCAA--ATGTTCATTGTGTAAATAACTATGAAAATAT s panTro5.chr20 66517353 45 + 66533130 TAAAAATGGAGCAA--ATGTTCAATGTGTAAATAACTATGAAAATAT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182422 45 + 62195757 TAAAAATGGAGCAA--ATGTTCAATGTGTAAATAACTATGAAAATAT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569092 44 - 578057 TAAAAATGGAGCAA--ATATTCAATGTGTAAATAACTATG-AAATAT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090807 45 - 110113093 TAAAAATGGAACAA--ATATTCAATGTGTAAATAACTATGAAAATAT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830609 45 - 92844088 TAAAAATGGAACAA--ATATTCAATGTGTGAATAGCTATGAAAATAT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496277 45 + 96509753 TAAAAATGGAACAA--ATATTCAATGTGTGAATAGCTATGAAAATAT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966238 45 - 16982598 TAAAAATGGAACAA--ATATTCAATGTGTGAATAGCTATGAAAATAT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768200 45 - 3785965 TAAAAATGGAACAA--ATATTCAATGTGTGAATAACTATGAAAATAT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358233 45 - 90373283 TAAAAATGGAACAA--ATATTCAATGTGTGAATAACTATGAAAATAT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158810 45 - 179258 TAAAAATGGAACAA--ATATTCAATGTGTGAATAACTATGAAAATAT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628132 45 - 5823884 TAAAAATGGAACAA--ATATTCAATGTGTGAATAACTATGAAAATAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186098 45 + 159171411 TGAAAAAGGAACAA--ATATTCAATTAATAAATAACTATGAAAATAT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348306 45 + 16356641 TAAAAAAGGAACAA--ATATTCAATTTGTAAATAACTATGAAAATAT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1222680 45 + 1231380 TAAAAAAGGAACAA--ATATTCAATTTGTAAATAACTATGAAAATAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749449 45 + 11732439 TAAAAAAGGAACAA--ATATTCAATTTGTAAATAACTATGAAAATAT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56934599 45 + 57149010 TAGGAAAGGAACAA--ATATTCAATTTGTAAATAACTATGAAGATAT i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22923668 41 + 22939663 TAGAAAAGGAACAAATATATTTTATTTCTAAATAACTATGA------ i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47668878 45 + 47698779 AGAAAAAGGAACAA--ATACTCAATTTGTAAAGTACTGTGAAAATGT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 354377 43 - 397369 --TAAAAGGAACAG--ATATTTAATTTGTCAAGTACTACAAAATTAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e mm10.chr2 181854601 15 + 182113224 I a score=33929.000000 s hg38.chr20_KI270870v1_alt 181107 3 + 183433 TAA s panTro5.chr20 66517398 3 + 66533130 TAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182467 3 + 62195757 TAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569136 3 - 578057 TAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090852 3 - 110113093 TAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830654 3 - 92844088 TAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496322 3 + 96509753 TAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966283 3 - 16982598 TAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768245 3 - 3785965 TAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358278 3 - 90373283 TAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158855 3 - 179258 TAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628177 3 - 5823884 TAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186143 3 + 159171411 TAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348351 3 + 16356641 TAA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1222725 3 + 1231380 TAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749494 3 + 11732439 TAA i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56934644 3 + 57149010 TAA i micMur3.chr18 C 0 I 158 s dasNov3.JH569290 354420 3 - 397369 TAA i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e canFam3.chr24 47668923 0 + 47698779 C e mm10.chr2 181854601 15 + 182113224 I e otoGar3.GL873542 22923709 0 + 22939663 C a score=1108381.000000 s hg38.chr20_KI270870v1_alt 181110 138 + 183433 CAGATAAAAGAATATTAggccgggcacagtggctcacgcctctaatcccagcgctttggg------------aggctgaggtgggcggatcacttgatgttaggagtttgagaccatcctggccaacgtggttgaaaccccgtctctact s panTro5.chr20 66517401 138 + 66533130 CAGATAAAAGAATATTAggccgggcacggtggctcacgcctctaatcccagcactttggg------------aggctgaggtgggcggatcacttgatgttaggagtttgagaccatcctggcgaacgtggttgaaaccccgtctctact i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182470 138 + 62195757 CAGATAAAAGAATATTAggccgggcacggtggctcacgcctctaatcccagcactttggg------------aggctgaggtgggcggatcacttgatgttaggagtttgagaccatcctggccaacgtggttgaaaccccgtctctact i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569139 138 - 578057 CAGATAAAAGAATATTAggctgggcacagtggctcatgcctctaatcccagcactttggg------------aggctgaggtgggcggatcacttgatgttaggagattgagaccatcctggccaatatggttgaaagcccgtctctact i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090855 138 - 110113093 TAGATAAAAGAATATTAggccggacacagtggctcatgcctgtaatcccagcactttggg------------aggctgaggtgggcggatcacttgatgtcaggagtttcagaccatcgtggccaacatgattgaaaccccgtctctact i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830657 137 - 92844088 TAGATAAAAGAATATTAggctgggcacggtggctcatgcctgtaatctcagcactttggg------------aggctgaggcgggtggatcacttgatgtcaggagttcaagaccggcctgaccaacatgg-tgaaacctcgcctctact i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496325 137 + 96509753 TAGATAAAAGAATATTAggctgggcacggtggctcatgcctgtaatctcagcactttggg------------aggctgaggcgggtggatcacttgatgtcaggagttcaagaccggcctgaccaacatgg-tgaaacctcgcctctact i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966286 137 - 16982598 TAGATAAAAGAATATTAggctgggcacggtggctcatgcctgtaatctcagcactttggg------------aggctgaggcgagtggatcacttgatgtcaggagttcaagaccggcctgaccaacatgg-tgaaacctcgcctctact i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768248 137 - 3785965 TAGATAAAAGAATATTAggctgggcacggtggctcacgcctgtaatctcagcactttggg------------aggctgaggcgggtggatcacttgatgtcaggagttcaagaccggcctgatcaacatgg-tgaaacctcgcctctact i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358281 137 - 90373283 TAGATAAGAGAATATTAggctgggcacagtggctcacgcctgtaatcccagcactttggg------------aggctgaggcgggtgggtcacttgatgtcaggagttcaagagcggcctgaccaacatgg-tgaaaccttgcctctact i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158858 137 - 179258 TAGATAAAAGAATATTAggctgggcacggtggctcacgcctgtaatctcagcactttggg------------aggctgaggcgggtggatcgcttgatgtcaggagttcaagaccggcctgaccaacatgg-tgaaaccttgcctctact i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628180 137 - 5823884 TAGATAAAAGAATATTAggctgggcacggtggctcacgcctgtaatcccagcactttggg------------aggctgaggcgggtggatcacttgatgtcaggagttcaagactggcctgaccaacatgg-tgaaacctcgcctctact i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186146 118 + 159171411 TAGATAAAAGAATGTTAggccgggcatggtggcttacccctataat-ccagcacttttgg------------aggcccaggtggatggatcacttgacatcaggagtttgagaagagcctggcctgcatgg------------------- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348354 119 + 16356641 TAGATAAAAGAATGTTAggcggggcatggtggcttacccctataatcccagcactttggg------------aggcccaggtggatggatcacttgacatcaggagtttgagaacagcctggcctgcatgg------------------- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1222728 119 + 1231380 TAGATAAAAGAATGTTAggccaggcatggtggcttacccctgtaatcccagcactttggg------------aggcccaggcggatggatcactggacatcaggagtttgagaacagcctggcctgcatgg------------------- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749497 119 + 11732439 TAGATAAAAGAATGTTAggccgagcgtggtggcttacccctagaatcccagcactttggg------------aggcccaggtggatggatcacttgacatcaggagtttgagaacagtctggcttgcatca------------------- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22923709 99 + 22939663 ----------------------ggctcggta-------cctgtag-ctcagcgtttagggcactggccacatacaccaaggttggtgg-----------------gttcaagcccagcctgg---gcctgc-taaacaatgacaacaaca i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e canFam3.chr24 47668923 0 + 47698779 C e mm10.chr2 181854601 15 + 182113224 I e micMur3.chr18 56934647 158 + 57149010 I e dasNov3.JH569290 354423 0 - 397369 C a score=46800.000000 s hg38.chr20_KI270870v1_alt 181248 7 + 183433 aaaaata s panTro5.chr20 66517539 7 + 66533130 aaaaata i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182608 7 + 62195757 aaaaata i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569277 7 - 578057 aaaaata i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110090993 7 - 110113093 aaaaata i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830794 7 - 92844088 aaaaata i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496462 7 + 96509753 aaaaata i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966423 7 - 16982598 aaaaata i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768385 7 - 3785965 aaaaata i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358418 7 - 90373283 aaaaata i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 158995 7 - 179258 aaaaata i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628317 7 - 5823884 aaaaata i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22923808 7 + 22939663 accacca i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47668923 7 + 47698779 AAAGATA i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e mm10.chr2 181854601 15 + 182113224 I e micMur3.chr18 56934647 158 + 57149010 I e dasNov3.JH569290 354423 0 - 397369 C e saiBol1.JH378156 16348473 0 + 16356641 C e cebCap1.NW_016107870v1 1222847 0 + 1231380 C e calJac3.chr5 58186264 0 + 159171411 C e aotNan1.NW_018500483v1 2749616 0 + 11732439 C a score=25789.000000 s hg38.chr20_KI270870v1_alt 181255 5 + 183433 caa-aa s panTro5.chr20 66517546 5 + 66533130 caa-aa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182615 5 + 62195757 caa-aa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569284 5 - 578057 caa-aa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091000 5 - 110113093 caa-aa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830801 5 - 92844088 caa-aa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496469 5 + 96509753 caa-aa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966430 5 - 16982598 caa-aa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768392 5 - 3785965 cag-aa i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358425 5 - 90373283 caa-aa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159002 5 - 179258 caa-aa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628324 5 - 5823884 caa-aa i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22923815 6 + 22939663 aagcaa i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e canFam3.chr24 47668930 0 + 47698779 C e mm10.chr2 181854601 15 + 182113224 I e micMur3.chr18 56934647 158 + 57149010 I e dasNov3.JH569290 354423 0 - 397369 C e saiBol1.JH378156 16348473 0 + 16356641 C e cebCap1.NW_016107870v1 1222847 0 + 1231380 C e calJac3.chr5 58186264 0 + 159171411 C e aotNan1.NW_018500483v1 2749616 0 + 11732439 C a score=51424.000000 s hg38.chr20_KI270870v1_alt 181260 7 + 183433 attagct s panTro5.chr20 66517551 7 + 66533130 attagct i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182620 7 + 62195757 attagct i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569289 7 - 578057 attagct i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091005 7 - 110113093 attagct i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830806 7 - 92844088 attagct i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496474 7 + 96509753 attagct i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966435 7 - 16982598 attagct i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768397 7 - 3785965 attagct i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358430 7 - 90373283 attagct i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159007 7 - 179258 attagct i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628329 7 - 5823884 attagct i colAng1.NW_012114444v1 C 0 C 0 s otoGar3.GL873542 22923821 7 + 22939663 aataggt i otoGar3.GL873542 C 0 C 0 s dasNov3.JH569290 354423 7 - 397369 ATTAGAT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e canFam3.chr24 47668930 0 + 47698779 C e mm10.chr2 181854601 15 + 182113224 I e micMur3.chr18 56934647 158 + 57149010 I e saiBol1.JH378156 16348473 0 + 16356641 C e cebCap1.NW_016107870v1 1222847 0 + 1231380 C e calJac3.chr5 58186264 0 + 159171411 C e aotNan1.NW_018500483v1 2749616 0 + 11732439 C a score=1439953.000000 s hg38.chr20_KI270870v1_alt 181267 140 + 183433 gggcgtggtggcgcatgcctgtaatcccagctactggggaggttgaggcgggaggatcacttgaacccaggagacggaggttgcagtaagtcgagatcacacccttgcaccccagcctgggtgacagagt---aagactctgt s panTro5.chr20 66517558 140 + 66533130 gggcgtggtggcgcatgcctgtaatcccagctactggggaggttgaggcgggaggatcacttgaacccaggagacagaggttgcagtaagttgagatcacacccttgcaccccagcctgggtgacagagt---aagactctgt i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182627 140 + 62195757 gggcgtggtggcgcatgcctgtaatcccagctactggggaggttgaggcgggaggatcacttgaacccaggagacagaggttgcagtaagtcgagatcacacccttgcaccccagcctgggtgacagagt---aagactctgt i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569296 140 - 578057 gggcgtggtggcgcatgcctgtaatcccagctactggggaggttgaggcgggaggatcacttgaacccaggagacggaggttgcagtaagtcgagatcacacccttgcaccccagcctgggtgacagagt---aagactctgt i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091012 140 - 110113093 gggcatggtggtgcgcgcctgtaatcccagctactggggaggttgaggcaggaggatcacttgaacccaggagacggaggttgcagtaagtcgagatcacacccttgcaccccagcctgggtgacagagt---aagactctgt i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830813 140 - 92844088 gggcatggtggcacgtgcctgtagtcccagctactggggaggttgaggtgggaggatcacttgaacccaggagacggaggttgcagcgagtggagatcgcacccttgcaccccagcctgggtgacagagt---aagactctgt i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496481 140 + 96509753 gggcatggtggcacgtgcctgtagtcccagctactggggaggttgaggtgggaggatcacttgaacccaggagacggaggttgcagcgagtggagatcgtacccttgcaccccagcctgggtgacagagt---aagactctgt i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966442 140 - 16982598 gggcatggtggcacgtgcctgtagtcccagctactggggaggttgaggtgggaggatcacttgaacccaggagacggaggttgcagcgagtgaagatcgcacccttgcaccccagcctgggtgacagagt---aagactctgt i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768404 140 - 3785965 gggcatggtggcacgtgcctgtagtcccagctactggggaggttgaggcgggaggatcacttgaacccaggagacggaggttgcagcgagtggagatcgcacccttgcaccccagcctgggtgacagagt---aagactctgt i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358437 143 - 90373283 gggtatggtggcacgtgcctatagtcccagctactggggaggttgaggcgggaggatcacttgaacccaggagacggaggttgcagcgagtggagatcgcacccttgcaccccagcctgggtgacagagtaagaagactctgt i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159014 140 - 179258 gggcatggtggcacgtgcctgtagtcccagctactggggaggttgaggcgggaggatcacttgaacccaggagacggaggttgcagtgagtggagatcgcacctttgcaccccagcctgggtgacagagt---aagactctgt i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628336 140 - 5823884 gggcgtggtggcacgtgcctgtagtcccagctactggggaggttgaggtgggaggatcacttgaacccaggagacggaggttgcagcaagtggagatcacacccttgcaccccagcctgggtgacagagt---aagactctgt i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186264 132 + 159171411 --------tggcatgtccctgtagtcccagctactggggaggctgatgctggaggatcacttgaacccaggagacggaggttgcagtgagttgagattgtaccactgcaccccagcttgagtgacagagt---aagactgtgt i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348473 132 + 16356641 --------tagcatgtccctgtagtcccagctactggggaggctgatgctggaggatctcttgaacccaggagatggaggttgcagttagtcgagattgtaccactgcaccccagcttgggggacagagt---aagaatgtgt i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1222847 132 + 1231380 --------tggcctgtccctgtagtcccagctgctggggaggctgatgctgggggatcacttgaacccaggagatggaggttcaagtgagttgagattgtaccactgcaccccagcttgggtgacagagt---aagactgtgt i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749616 132 + 11732439 --------tggcatatccctgtagtcccagctactggggaggctgatgctggaggatcacttgaacccaggagatggaggttgcagtgagttgagattgtaccagtgcaccccagcttgggtgacagagt---aagactgtgt i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22923828 136 + 22939663 gggcattgtggcaggtgcctgtagtcttagctacttgggaggctgaggcatgagaatcatttaagcctaagagtttgaggttgctgtgagctgtgat---gccacagcattctactaagggtga-atagt---gagactctgt i otoGar3.GL873542 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e canFam3.chr24 47668930 0 + 47698779 C e mm10.chr2 181854601 15 + 182113224 I e micMur3.chr18 56934647 158 + 57149010 I e dasNov3.JH569290 354430 0 - 397369 C a score=36511.000000 s hg38.chr20_KI270870v1_alt 181407 4 + 183433 ctcc- s panTro5.chr20 66517698 4 + 66533130 ctcc- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182767 4 + 62195757 ctcc- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569436 4 - 578057 ctcc- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091152 5 - 110113093 ctcca i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830953 4 - 92844088 ctca- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496621 4 + 96509753 ctca- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966582 4 - 16982598 ctca- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768544 4 - 3785965 ctca- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358580 4 - 90373283 ctca- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159154 4 - 179258 ctca- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628476 4 - 5823884 ctca- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186396 4 + 159171411 ctca- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348605 4 + 16356641 ctca- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1222979 4 + 1231380 ctca- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749748 4 + 11732439 ctca- i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22923964 4 + 22939663 ctca- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854616 4 + 182113224 CTCC- i mm10.chr2 I 15 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e canFam3.chr24 47668930 0 + 47698779 C e micMur3.chr18 56934647 158 + 57149010 I e dasNov3.JH569290 354430 0 - 397369 C a score=13687.000000 s hg38.chr20_KI270870v1_alt 181411 3 + 183433 a-aa s panTro5.chr20 66517702 3 + 66533130 a-aa i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182771 3 + 62195757 a-aa i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569440 3 - 578057 a-aa i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091157 3 - 110113093 a-aa i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830957 3 - 92844088 a-aa i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496625 3 + 96509753 a-aa i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966586 3 - 16982598 a-aa i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768548 3 - 3785965 a-aa i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358584 3 - 90373283 a-aa i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159158 3 - 179258 a-aa i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628480 3 - 5823884 a-aa i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186400 4 + 159171411 agaa i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348609 3 + 16356641 a-aa i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1222983 3 + 1231380 a-aa i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749752 3 + 11732439 a-aa i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22923968 3 + 22939663 c-aa i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854620 3 + 182113224 T-GT i mm10.chr2 C 0 C 0 s canFam3.chr24 47668930 3 + 47698779 -GAT i canFam3.chr24 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e micMur3.chr18 56934647 158 + 57149010 I e dasNov3.JH569290 354430 0 - 397369 C a score=709798.000000 s hg38.chr20_KI270870v1_alt 181414 66 + 183433 aaaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTGTATTACTAGTAGGTGGGTATTAATATACACATGAACAC-A s panTro5.chr20 66517705 66 + 66533130 aaaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGGTGGGTATTAATATACACATGAACAC-A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182774 66 + 62195757 aaaag--------------------------------------aaTGTTGGAGACAT----A--C-TCACTCTATTACTAGTAGGTGGGTATTAATATACACATGAACAC-A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569443 66 - 578057 aaaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGGTGGGTATTAATACACACATGAACAC-A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091160 66 - 110113093 aaaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTGGTAGGTGGGTATTAATATACACACGAACAC-A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92830960 65 - 92844088 acaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGGTGGGTATTAATACACACATGAACGC-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96496628 65 + 96509753 acaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGGTGGGTATTAATACACACATGAACGC-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966589 65 - 16982598 acaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGGTGGGTATTAATATACACATGAACGC-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768551 65 - 3785965 acaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGGTGGGTATTAATACACACATGAACGC-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358587 65 - 90373283 acaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTCTTACTAGTAGGTGGGTATTAATACACAGATGAACGC-- i chlSab2.chr2 C 0 I 85 s manLeu1.NW_012101652v1 159161 66 - 179258 acaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGGTGGGTATTAATACACACATGAACACA- i manLeu1.NW_012101652v1 C 0 I 169 s colAng1.NW_012114444v1 5628483 65 - 5823884 aaaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCAATTACTAGTAGGTGGGTATTAATATACACATGAATGC-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186404 65 + 159171411 aaaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGTTGAGTATTAATATACACATGAACAC-- i calJac3.chr5 C 0 I 1 s saiBol1.JH378156 16348612 65 + 16356641 aaaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGATGAGTATTAATATACACATGAACAC-- i saiBol1.JH378156 C 0 I 1 s cebCap1.NW_016107870v1 1222986 65 + 1231380 aaaag--------------------------------------aaTGTTGGAGACAT----A--T-TCACTCTATTACTAGTAGATGAGTATTAATATACACACGAACAC-- i cebCap1.NW_016107870v1 C 0 I 1 s aotNan1.NW_018500483v1 2749755 69 + 11732439 aaaag--------------------------------------aaTATTGGAGACATATTCA--T-TCACTCTATTACTAGTAGATGAGTATTAATATACACATGAACAG-- i aotNan1.NW_018500483v1 C 0 I 1 s otoGar3.GL873542 22923971 103 + 22939663 ataaataaataaaTAACTACGAAAGTATTAAAATAGGTAAAGTAATGCTGGAGACAT----A--A-TCACTGTATTACTAGTGGGTAAGTATTAATACATGAATGAATAT-- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181854623 62 + 182113224 AAAAG--------------------------------------GATGTTAGAAATGT----A--GATTGCTGTATTAC---TGAGTGGATGTTGTGATGTCATTGAGCA--- i mm10.chr2 C 0 C 0 s canFam3.chr24 47668933 67 + 47698779 AAAAG--------------------------------------AATTCTGGAGGCCT----ACGT-TCTCTGTGTTCCCATTGGATGAGCTTGAACCCAGAATCGAGTAC-- i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 354430 61 - 397369 AAAAG--------------------------------------AGGGTTGGAGATAG----A--C-TCACTGTGTTACTACTGGATGAGA--TATAACGTGGATGACT---- i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e micMur3.chr18 56934647 158 + 57149010 I a score=294580.000000 s hg38.chr20_KI270870v1_alt 181480 30 + 183433 GCAAATAATAGAATAATGAAACTGGGCTGT-- s panTro5.chr20 66517771 28 + 66533130 GCAAATAATAGAACAATGAAACTAGGC--T-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182840 28 + 62195757 GCAAATAATAGAACAATGAAACTAGGC--T-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569509 28 - 578057 GCAAATAATAGAATAATGAAACTAGGC--T-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091226 28 - 110113093 GCAAATAATAGAATAATGAAACTAGGC--T-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92831025 28 - 92844088 GCAGACGATAGAATAATGAAACTAGGC--T-- i rheMac8.chr10 C 0 I 257 s macFas5.chr10 96496693 28 + 96509753 GCAGACGATAGAATAATGAAACTAGGC--T-- i macFas5.chr10 C 0 I 257 s macNem1.NW_012014244v1 16966654 28 - 16982598 GCAGACAATGGAATAATGAAACTAGGC--T-- i macNem1.NW_012014244v1 C 0 I 2 s cerAty1.NW_012001373v1 3768616 28 - 3785965 GCAGACAGTAGAATAATGAAACTAGGC--T-- i cerAty1.NW_012001373v1 C 0 I 85 s chlSab2.chr2 90358737 28 - 90373283 GCAGACAATGGAATAATGAAACTAGGC--T-- i chlSab2.chr2 I 85 C 0 s manLeu1.NW_012101652v1 159396 28 - 179258 GCAGACAATAGAATAATGAAACTAGGC--T-- i manLeu1.NW_012101652v1 I 169 C 0 s colAng1.NW_012114444v1 5628548 28 - 5823884 GCAGATAATAGAATAATGAAACTAGGC--T-- i colAng1.NW_012114444v1 C 0 I 2 s calJac3.chr5 58186470 28 + 159171411 GCAAATAATAGAGTAATGAAACTAGGC--T-- i calJac3.chr5 I 1 C 0 s saiBol1.JH378156 16348678 26 + 16356641 GCAACTAAT--AGTAATGAAACTAGGC--T-- i saiBol1.JH378156 I 1 C 0 s cebCap1.NW_016107870v1 1223052 26 + 1231380 GCAACTAAT--AGTAATGAAACTAGGC--T-- i cebCap1.NW_016107870v1 I 1 C 0 s aotNan1.NW_018500483v1 2749825 28 + 11732439 GCAAATAATAGAGTAATGAAACTAGGC--T-- i aotNan1.NW_018500483v1 I 1 C 0 s otoGar3.GL873542 22924075 20 + 22939663 --------GTGAATAATGAAACGAGGC--T-- i otoGar3.GL873542 I 1 I 2 s mm10.chr2 181854685 22 + 182113224 -----GAATAGAGTTAT-AAACTAGGC--T-- i mm10.chr2 C 0 I 2 s canFam3.chr24 47669001 24 + 47698779 ---GTAAACAGAGTCATGAACCT-GGC--T-- i canFam3.chr24 I 1 I 2 s dasNov3.JH569290 354491 30 - 397369 ATTAAAAATAGAGTAAGGAAACTATGC--TGT i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e micMur3.chr18 56934647 158 + 57149010 I a score=7454.000000 s hg38.chr20_KI270870v1_alt 181510 2 + 183433 GT s panTro5.chr20 66517799 2 + 66533130 GT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182868 2 + 62195757 GT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569537 2 - 578057 GT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091254 2 - 110113093 GT i nomLeu3.chr13 C 0 C 0 s cerAty1.NW_012001373v1 3768729 2 - 3785965 GT i cerAty1.NW_012001373v1 I 85 C 0 s chlSab2.chr2 90358765 2 - 90373283 GT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159424 2 - 179258 GT i manLeu1.NW_012101652v1 C 0 C 0 s calJac3.chr5 58186498 2 + 159171411 GT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348704 2 + 16356641 GT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1223078 2 + 1231380 GT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749853 2 + 11732439 GT i aotNan1.NW_018500483v1 C 0 C 0 s mm10.chr2 181854709 1 + 182113224 G- i mm10.chr2 I 2 C 0 s canFam3.chr24 47669027 1 + 47698779 -C i canFam3.chr24 I 2 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e colAng1.NW_012114444v1 5628576 2 - 5823884 I e micMur3.chr18 56934647 158 + 57149010 I e dasNov3.JH569290 354521 0 - 397369 C e macNem1.NW_012014244v1 16966682 2 - 16982598 I e rheMac8.chr10 92831053 257 - 92844088 I e otoGar3.GL873542 22924095 2 + 22939663 I e macFas5.chr10 96496721 257 + 96509753 I a score=596029.000000 s hg38.chr20_KI270870v1_alt 181512 57 + 183433 CAGGAAGACAA--ATTGTGACCCAGGTGTT-GATTCCACCACTGATTAATATAGCCAAGC s panTro5.chr20 66517801 57 + 66533130 CAGGAAGACCA--ATTGTGACCCAGGTGTT-GATTCCATCACTGATTAATATAGCCAAGC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182870 57 + 62195757 CAGGAAGACCA--ATTGTGACCCAGGTGTT-GATTCCACCACTGATTAATATAGCCAAGC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569539 57 - 578057 CAGGAAGACAA--ATTGTGACCCAGGTGTT-GATTCCACCACTGATTAATATAGCCAGGC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091256 55 - 110113093 GAGGAAGACAA--AC--TGACCCAGGTGTT-GATTCCACCACTGATTAATATAGCCAAGC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92831310 57 - 92844088 CAGGAAAACAA--ACTGTAACCCAGGTGTT-GGTTCCACCACTGATTAATGTAGCCAAGC i rheMac8.chr10 I 257 C 0 s macFas5.chr10 96496978 57 + 96509753 CAGGAAAACAA--ACTGTAACCCAGGTGTT-GGTTCCACCACTGATTAATGTAGCCAAGC i macFas5.chr10 I 257 C 0 s macNem1.NW_012014244v1 16966684 57 - 16982598 CAGGAAAACAA--ACTGTAACCCAGGTGTT-GGTTCCACCACTGATTAATGTAGCCAAGC i macNem1.NW_012014244v1 I 2 C 0 s cerAty1.NW_012001373v1 3768731 57 - 3785965 CAGGAAAACAA--ACTGTAACCCAGGTGTT-GGTTCCACCACTGATTAATGTAGCCAAGC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358767 57 - 90373283 CAGGAAAACAA--ACTGTAACCCAGGTGTT-GGTTCCACCACTGATTAATGTTGCCAAGC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159426 57 - 179258 CAGGAAAACAA--ACTGTAACCCAGGTGTT-GGTTCCACCACTGATTAATGTAGCCAAGC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628578 57 - 5823884 CAGGAAAACAA--ACTGTAACCCAGGTGTT-GATTCCACCACTGATTAATATAGCCAAGC i colAng1.NW_012114444v1 I 2 C 0 s calJac3.chr5 58186500 56 + 159171411 CATAAGAATAA--ACTGTAACCCA-GTTTT-AATTCCAGCACTGATTAATATAGCCAAGC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348706 57 + 16356641 CATAAGAACCA--ACTGTAACCCAGGTTTT-AATTCCAGCACTGATGAATATAGCCAAGC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1223080 57 + 1231380 CATGAGAACAA--ACTGTAACCCAGGTTTT-AATTCCAGCACTGATTAATATAGCCAAGC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749855 57 + 11732439 CATAAGAACAA--ACTGTAACCCAGGTTTT-AATTCCAGCACTGATTAATATAGCCAAGC i aotNan1.NW_018500483v1 C 0 C 0 s otoGar3.GL873542 22924097 53 + 22939663 CAGAGAAATAG--ACCGTAACTCAGCTTTT-AAATCTGCCACTGGGT----TAGCCAAAC i otoGar3.GL873542 I 2 C 0 s mm10.chr2 181854710 47 + 182113224 ----AGAACAA--AC-----CCTAAGTTTCAAATTTTACCACTGATC-ATCTAGACAGC- i mm10.chr2 C 0 C 0 s canFam3.chr24 47669028 58 + 47698779 CAGGAAGCAAAGTGCTGCAACCCATGGTTT-TCTTCTGCTTCTGACTGATG-AGACAAAC i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 354521 56 - 397369 TGAAAACAAAA--ACCTTAACCTATAGATT-TGGTCAACCACTGATTGAT-TAGCCTAGC i dasNov3.JH569290 C 0 C 0 e proCoq1.NW_012150197v1 1928997 4415 - 2029793 T e micMur3.chr18 56934647 158 + 57149010 I a score=15247.000000 s hg38.chr20_KI270870v1_alt 181569 2 + 183433 AA s panTro5.chr20 66517858 2 + 66533130 AA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182927 2 + 62195757 AA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569596 2 - 578057 AA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091311 2 - 110113093 AA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92831367 2 - 92844088 AG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96497035 2 + 96509753 AG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966741 2 - 16982598 AG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768788 2 - 3785965 AG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358824 2 - 90373283 AA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159483 2 - 179258 AG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628635 2 - 5823884 AA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186556 2 + 159171411 AA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348763 2 + 16356641 AA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1223137 2 + 1231380 AA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749912 2 + 11732439 AA i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1924582 2 - 2029793 AA i proCoq1.NW_012150197v1 T 4415 C 0 s otoGar3.GL873542 22924150 2 + 22939663 AA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854757 1 + 182113224 A- i mm10.chr2 C 0 C 0 s canFam3.chr24 47669086 2 + 47698779 GG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 354577 2 - 397369 AA i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56934647 158 + 57149010 I a score=839358.000000 s hg38.chr20_KI270870v1_alt 181571 54 + 183433 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAATTGATGCATTTGGAAATATCTTT s panTro5.chr20 66517860 54 + 66533130 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAGTTGATGCATTTGAAAATATCTTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182929 54 + 62195757 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAGTTGATGCATTTGAAAATATCTTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569598 53 - 578057 TATTGCTTCCTTTCCCTTTC-AAGTTAAGAATTGATGCATTTGAAAATATCTTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091313 54 - 110113093 TATTGCTTCCTTTCCTTTTCAAAGTTAAGAATTGATGCGTTTGAAAACGTCTTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92831369 54 - 92844088 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAACTGATGCATTTGAAAATGTCTTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96497037 54 + 96509753 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAACTGATGCATTTGAAAATGTCTTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966743 54 - 16982598 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAACTGATGCATTTGAAAATGTCTTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768790 54 - 3785965 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAACTGATGCATTTGAAAATGTCTTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358826 54 - 90373283 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAATTGATGCATTTGAAAATGTCTTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159485 54 - 179258 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAACTGATGCATTTGAAAATGTCTTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628637 54 - 5823884 TATTGCTTCCTTTCCCTTTCAAAGTTAAGAATGGATGCATTTGAAAATGTCTTC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186558 54 + 159171411 TATTGCTCCCTTTTCCTTTCAAAGTTAAGGATTAAGGCATTTGAAAATATCTTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16348765 54 + 16356641 TATTGCTTCCTTTTCCTTTCAAAGTTAAGGATTAAGTCATTTGAAAATATCTTT i saiBol1.JH378156 C 0 I 325 s cebCap1.NW_016107870v1 1223139 54 + 1231380 TATTGCTTCCTTTTCCTTTCAAAGTTAAGGATTAAGTCATTTGAAAATATCTTT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749914 54 + 11732439 TATTGCTTCCTTTTCCTTTCAAAGTTAAGGATTAAGGCATTTGAAAATACCTTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56934805 54 + 57149010 TATTGCTTCCTTTTCTTTTTGAAGTTAAGAGTTAGTGCATTTGAAAATATCTTT i micMur3.chr18 I 158 C 0 s proCoq1.NW_012150197v1 1924584 54 - 2029793 TATTGCTTCCTTTTATTTTCGAAGTTAAGAATTAGTGCATTTGAAAATATCTTT i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22924152 54 + 22939663 TATTGCTTCCATTTCTTTGCAAAGTTAGGAATCAATGCATTTGAAAATATATTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854758 46 + 182113224 ------TTTCTTTCCTTTGCAGAGTTGATAACTAGTATATTTGCAAAACTTT-- i mm10.chr2 C 0 C 0 s canFam3.chr24 47669088 54 + 47698779 CCTTTCTTCCTTTCCTCATTTAAGTTTGGGGTTAGTCTGTTTGAAAATCCCTTT i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 354579 50 - 397369 TATTGCT----TTCCTTTTTAAAGTTGAGGGTTAGTGCTTTTGGAAACATCTTT i dasNov3.JH569290 C 0 C 0 a score=983317.000000 s hg38.chr20_KI270870v1_alt 181625 72 + 183433 TGAAAAGTACCATATGATTGTAAATTAGAGCACTAATTGACATTTGCT----TAGCATGCTCTCATATTCTTGTAA s panTro5.chr20 66517914 72 + 66533130 TGAAAAGTACCATATGATTGTAAATTAGAGCACTAATTGACATTTGCT----TAGCATGCTCTCATATTCTTGTAA i panTro5.chr20 C 0 C 0 s panPan2.chr20 62182983 72 + 62195757 TGAAAAGTACCATATGATTGTAAATTAGAGCACTAATTGACATTTGCT----TAGCATGCTCTCATATTCTTGTAA i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569651 72 - 578057 TGAAAAGTACCATATGATTGTAAATTAGAGCACTAATTGACATTTGCT----TAGCATGCTCTCATATTCTTGTAA i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091367 69 - 110113093 TGAAAAGTGCCATATGATTGTAAATTAGAGCACTAATTGACATTTGCT----TAGCATGCTCTCATA---TTGTAA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92831423 72 - 92844088 TGAAAAGTACCATATGATTGTAAATCAGAGCACTAATTGACATTTGCT----TAGCCTGCTCTCATATTCTTTCAA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96497091 72 + 96509753 TGAAAAGTACCATATGATTGTAAATCAGAGCACTAATTGACATTTGCT----TAGCCTGCTCTCATATTCTTTCAA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966797 72 - 16982598 TGAAAAGTACCATATGATTGTAAATCAGAGCACTAATTGACATTTGCT----TAGCCTGCTCTCATATTCTTTCAA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768844 72 - 3785965 TGAAAAGTACCATATGATTGTAAATCAGAGCACTAATTGACATTTGCT----TAGCCTGCTCTCATATTCTTTCAA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358880 72 - 90373283 TGAAAAGTACCATATGATTGTAAATCAGAGCACTAATTGACATTTGCT----TAGCCTGCTCTCATATTCTTTCAA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159539 72 - 179258 TGAAAAGTACCATATGATTGTAAATCAGAGCACTAATTGACATTTGCT----TAGCCTGCTCTCATATTCTTTCAA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628691 71 - 5823884 TGAAAAGTACCATATGATTGT-AATCAGAGCACTAATTGACGTTAGCT----TAGCCTGCTCTCATATTCCTTCAA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186612 65 + 159171411 TGAAAAGTATCA-------GTAAATTGGAGCACTAATTGACATTTGCT----TAGCATGCTCTCATATTCTTATAA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16349144 65 + 16356641 TGAAAAGTATCA-------GTAAACTGGAGCACTAATTGACATGTGCT----TAGCATTCTCTCATATTCTTATAA i saiBol1.JH378156 I 325 C 0 s cebCap1.NW_016107870v1 1223193 65 + 1231380 TGAAAAGTAGCA-------GTAAATTGGAGCACTAATTGACATTTGCT----TAGCATTCTCTCATATTCTTAAAA i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2749968 65 + 11732439 TGAAAAGTATCA-------GTAAATTGGAGCACTAATTGGCATTTGCT----TAGCATGCTGTCATATTCTTATAA i aotNan1.NW_018500483v1 C 0 I 326 s micMur3.chr18 56934859 72 + 57149010 AGAAAAGTACCATATGAATGCAAATTAGAGCACTAATTGACACTTGCT----TAGAATACTCTCACATTCTTGTAA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1924638 76 - 2029793 AGAAAAGTACCATATGAACGCAAATTAGAGCACTAATTGACATTTGCTTTAGTAGAATAGTCTCATATTCTTGTAA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22924206 71 + 22939663 TGAAAAGTACTACATGAATGCAAATTAGAGCGCCAATTAACATTT-CT----TAGAACATGCTCATATTTTTATAA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854804 67 + 182113224 TGAGAAACA-CGTGTGGT-GCAAAGTAGACCATTGGTTCCTATTTGCT----TAGAATACTCCC---CTTTTTGAA i mm10.chr2 C 0 I 2 s canFam3.chr24 47669142 69 + 47698779 TGAGAAGGACCACGTGCATGCACGTTAGAGCTGTGATTGACATTAGCC------AGATGCTCCCCTGTGCCCGCG- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 354629 72 - 397369 TGATAAGTACCATACGAATGCAAATTAGAGTACTTATTGACATTTGCT----TAGAATATGCTCATATTCTTGTAA i dasNov3.JH569290 C 0 C 0 a score=12722262.000000 s hg38.chr20_KI270870v1_alt 181697 815 + 183433 CATATTCATAAATTTGCCAGTTAATTGAAATGATGCTACGGGTCTTAGGTGTGTAGGCGTTGTGGTG---GTGT----CACTCC--GATGCATTTGACTGTGTCTCACTCTTCTGTGCTGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACCATTAAAAAGATTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCGGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAAT-AGGAAGAGCAGATTGCT-GAGTGTGAAGTTCGTGCTGCCTGTGTGCTGTTGAAGGGTCACCTGGAGGCAGACGTTGTGGGGAAGGGAACTGCTGGGCTCATCCACACCATGGTT---TTCTTCTAG----TTCCTGATTGACCTCTAAAATTCT--ATTCAGTTGTATGATTTG--TTT--ACAT--AGTTCCACAAGACCTTCATTGCATAGAAGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGACGAAACACTG--AAGTCTGCGTA--------------AGAGAGAC s panTro5.chr20 66517986 814 + 66533130 CATATTCATAAATTTGCCAGTTAATTGAAATGATGTTACGGGTCTTAGGTGTGTAGGCGTTGTGGTG---GTGT----CACTCT--GATGCGTTTGACTGTGTCTCACTCTTCTGTGCTGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACCATTAAAAAGATTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGGCTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCGGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAAT-AGGAAGAGCAGATTGCT-GAGTGTGAAGTTCGTGCTGCCTGTGTGCTGTTGAAGGGTCACCTGGAGGCAGACGTTGTGGGGAAGGGAACGGCTGGGCTCATCCACACCATGGTTTTCTTCTTCTAG----TTGCTGATTGACCTCTAAAATTCT--ATTCAGTTGTATGATTTC--TTT--ACAT--AGTTCCACAAGACCTTCATTGCATAGAAGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGACGAAACACTG--AAGTCTGCCTA------------------AGAC i panTro5.chr20 C 0 C 0 s panPan2.chr20 62183055 818 + 62195757 CATATTCATAAATTTGCCAGTTAATTGAAATGATGTTACGGGTCTTAGGTGTGTAGGCGTTGTGGTG---GTGT----CACTCT--GATGCGTTTGACTGTGTCTCACTCTTCTGTGCTGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACCATTAAAAAGATTATTCATCAGGAAACTGTAAGCAAAAACGGAAACGGGCTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCGGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAAT-AGGAAGAGCAGATTGCT-GAGTGTGAAGTTCGTGCTGCCTGTGTGCTGTTGAAGGGTCACCTGGAGGCAGACGTTGTGGGGAAGGGAACTGCTGGGCTCATCCACACCATGGTTTTCTTCTTCTAG----TTGCTGATTGACCTCTAAAATTCT--ATTCAGTTGTATGATTTC--TTT--ACAT--AGTTCCACAAGACCTTCATTGCATAGAAGACTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGACGAAACACTG--AAGTCTGCCTA--------------AGAGAGAC i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 569723 817 - 578057 CATATTCATAAATTTG-CAGTTAATTGAAATGATGTTACGGGTCTTAGGTGTGTAGGCGTTGTGGTA---GTGT----CACTCC--GATGCGTTTGACTGTGTCTCACTCTTCTGTGCTGCAGCACCGGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACCATAAAAAAGATTATTCATCAGGAAACTGTGAGCAGAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACAATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCGGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCAGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGCCTCCTGTTTGAAAGGGGGAAAT-AGGAAGAGCAGATTGCT-GAGTGTGAAGTTCGTGCTGCCTGTGTGCTGTTGAAGGGTCACCTGGAGGCAGACGTTGTGGGGAAGGGAACTGCTGGGCTCATCCACACCATGGTTTTCTTCTTCTAG----TTCCTGATTGACCTCTAAAATTCT--ATTCAGTTGTATGATTTC--TTT--ACAT--AGTTCCACAAGACCTTCATTGCATAGAAGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGACGAAACACTG--AAGTCTGCGTA--------------AGAGAGAC i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110091436 817 - 110113093 CATACTCATAAATTTGCCGGTTAATTCAGATGATGTTACGGGTCTTAGATGTGTGGGCGTTGTGGTA---GTGT----CACTCA--GATGCGTTTGACTGTG--TCACTCTTTCGTGCTGCAGCACCAGTGGCAGTTCGCAGCCTGCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAAAAGATTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCTGCCTGAAACTAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTTCTGAACCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGATGGCT-GAGTCTGAAGTTCGTGCTGCCTATGTGCTGTTGAAGGGTCACCTGGAGGTAGACGTTGTGGGGAAGGGAACTGCTGGGCTCATCCACACCGTGGTTTTCTTCTTCTAG----TTCCTGAGTGACCTCTAAAATTCT--ATTCAGTTGTATGATTTC--TTT--ACAT--AATTCCACAAGACTTTCATTGCATAGAAGATTGTTTTCCCAAGGCGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGACGAAACACTA--AAGTGTGCGTA--------------ATAGAGAC i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92831495 810 - 92844088 CATATTCATAAATTTGCAAGTTAATTCAAATGAAGTTACGGGTCTTAGATGTGTAGGCATTGTGGTC---GTGT----TGCTCA--GATGAGTTTGACTGTGTCTCATTCTTTTGTGCCGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAAAAGGTTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGG---GAAGAAGAGAAGACCCCGCCTCAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGATTGCT-GAGTCTGAAGTTTGTGCTGCCTATGTGCTGTTGA------ACCTGGAGGCAGACATTGCGGGGAAGGGAACTGCTGGGCTCATCCACATCATGGTTTTCTTCTTCTAG----TTCCTGATTGGCCTCTAAAATTGT--ATTCAGTTGTATGATTTC--TTT--ACGT--AATTCCACAAGACCTTCATTGCATAGAAGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGATGAAACACTA--AAGTGTGTGTA--------------AGAGAGAC i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96497163 810 + 96509753 CATATTCATAAATTTGCAAGTTAATTCAAATGAAGTTACGGGTCTTAGATGTGTAGGCATTGTGGTC---GTGT----TGCTCA--GATGAGTTTGACTGTGTCTCATTCTTTTGTGCCGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAAAAGGTTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGG---GAAGAAGAGAAGACCCCGCCTCAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGATTGCT-GAGTCTGAAGTTTGTGCTGCCTACGTGCTGTTGA------ACCTGGAGGCAGACATTGCGGGGAAGGGAACTGCTGGGCTCATCCACATCATGGTTTTCTTCTTCTAG----TTCCTGATTGGCCTCTAAAATTGT--ATTCAGTTGTATGATTTC--TTT--ACGT--AATTCCACAAGACCTTCATTGCATAGAAGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGATGAAACACTA--AAGTGTGTGTA--------------AGAGAGAC i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16966869 813 - 16982598 CATATTCATAAATTTGCAAGTTAATTCAAATGAAGTTACGGGTCTTAGATGTGTAGGCATTGTGGTC---GTGT----TGCTCA--GATGAGTTTGACTGTGTCTCATTCTTTTGTGCCGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAAAAGGTTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCGTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCTCAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGATTGCT-GAGTCTGAAGTTTGTGCTGCCTACGTGCTGTTGA------ACCTGGAGGCAGACATTGCGGGGAAGGGAACTGCTGGGCTCATCCACATCATGGTTTTCTTCTTCTAG----TTCCTGATTGGCCTCTAAAATTGT--ATTCAGTTGTATGATTTC--TTT--ACGT--AATTCCACAAGACCTTCATTGCATAGAAGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGATGAAACACTA--AAGTGTGTGTA--------------AGAGAGAC i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3768916 813 - 3785965 CATATTCATAAATTTGCAAGTTAATTCAAATGAAGTTACGGGTCTTAGATGTGTAGGCATTGTGGTC---GTGT----TGCTCA--GATGAGTTTGACTGTGTCTCATTCTTTTGTGCCGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAAAAGGTTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCTGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGATTGCT-GAGTCTGAAGTTTGTGCTGCCTACGTGCTGTTGA------ACCTGGAGGCAGACATTGCGGGGAAGGGAACTGCTGGGCTCATCCACATCATGGTTTTCTTCTTCTAG----TTCCTGATTGGCCTCTAAAATTGT--ATTCAGTTGTATGATTTC--TTT--ACGT--AATTCCACAAGACCTTCATTGCATAGAAGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGATGAAACACTA--AACTGTGTGTA--------------AGAGAGAC i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90358952 813 - 90373283 CATATTCATAAATTTGCAAGTTAATTCAAATGAAGTTATGGGTCTTAGATGTGTAGGCATTGTGGTC---GTGT----TGCTCA--GATGAGTTTGACTGTGTCTCATTCTTTTGTGCCGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAAAAGGTTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCTGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGACAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGATTGCC-GAGTCTGAAGTTTGTGCTGCCTACGTGCTGTTGA------ACCTGGAGGCAGACATTGCGGGGAAGGGAACTGCTGGGCTTATCCACATCATGGTTTTCTTCTTCTAG----TTCCTGATTGGCCTCTAAAATTGT--ATTCAGTTGTATGATTTC--TTT--ACGT--AATTCCACAAGACTTTCATTGCATAGAGGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTGTGATGAAACACTA--AAGTGTGTGTA--------------AGAGAGAC i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 159611 813 - 179258 CATATTCATAAATTTGCAAGTTAATTCAAATGAAGTTACGGGTCTTAGATGTGTAGGCATTGTGGTC---GTGT----TGCTCA--GATGAGTTTGACTGTGTCTCATTCTTTTGTGCCGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAAAAGGTTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCCGCCTGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGATTGCT-GAGTCTGAAGTTTGTGCTGCCTACGTGCTGTTGA------ACCTGGAGGCAGACATTGCGGGGAAGGGAACTGCTGGGCTCATCCACATCATGGTTTTCTTCTTCTAG----TTCCTGATTGGCCTCTAAAATTGT--ATTCAGTTGTATGATTTC--TTT--ACGT--AATTCCACAAGACCTTCATTGCATAGAAGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGATGAAACACTC--AAGTGTGTGTA--------------AGAGAGAC i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5628762 811 - 5823884 CATATTCATAGATTTGCCACTTAATTCAAATGAAGTTACGGGTCTTAGATGTGTAGGCATTGTGGTC---GTGT----CGCTCA--GATGAGTTTGACTATGTCTCATTCTTTTGTGCCGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAAAAGGTTATTCATCAGGAAACTGTGAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGGATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAGCGGAGGGAAGAAGAAGAGAAGACCCCGCCTGAAACAAAGCCGGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTTTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGACTGCT-GAGTCTGAAGTTTGTGCTGCCTACGTGCTGTTGA------ACCTGGAGGCAGAGGTTGCGGGGAAGGGAACTGCTGGGCTCATCCACATCATGGGTTTCTTCTTCTGG----TTCCTGATTGGCCTCTAAAATTGT--ATTCTGTTGTATGATTTC--TGT--ACGT--AATTCCACAAGACCTTTATTGCATAGAAGATTGTTTTCCCAAAGTGGAG-AGAATCTTCATAGAGAAAAAGAGAAGGCTGTTTCTTTTTCGGCTCTGATGAAACACTA--AAGTGTGTGTA----------------AGGGAC i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58186677 813 + 159171411 CATATTCGTCAATTTGCCAGTTAATTCAAACGATGTTACGGTTTTTAGGTGTTTAGG---TGTGGTG---GTGT----CACTCA--GATGAGTCTGACTGTGTGTCATTCTTTTGTGCTGCAGCGCCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACCATTAAGAAGATTATTCATCAGGAAACTGTCAGCAAAAACGGAAACGGACTAAAGAACACCCCCAAGTTTAAGCGAAGAAGAGTTCGCCGCCGTCGCATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGTATTTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCTGCCTGAAACAAAGCCCGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGATTGCT-GAGTTTGAAGTTTGTGCTGCCTGTGTGCGGCTGAAGAGTGATCTGGAAGCAGATGTTGTGGGGAAGGGAACTGCTGGACTCATCCACATCATGGTT---TTTTTCTAG----TTCCCGATTGACCTCTAAAATTTT--GTTCAGTTGTATGATTTC--TTT--ACAT--AATTCAACAAGACTTACATTCCATAGAAGACTGCTTTCCCAAATTGGAG-AGGATCTTCATAGAGAAAAAGAGAAAGGTGTTTCTTTTTCAGCTGTGATGAAACACTA--AAGTGTGCATA--------------AGAGTGAC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16349209 776 + 16356641 CATATTTGTAAATTTGCCAGTTAATTCAAATGATGTTACAGTTTTTAGATGTTTATG---TGTGGTG---GTGT----CACTCA--GATGAGT----CTGTGTGTCATTCTTTTGTGCTGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACCATTAAGAAGATTATTCATCAGGAAAGTGTCAGCAAAAATGGAAACGGACTAAAGAACACCCCCAGGTTTAAGCGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGTATCTCCAACCCCTCAGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCTGCCTGAAACAAAGCCAGACCCCCCAGTGAACTTTCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACCTGCTTTATTACAGAGAAAAATAAGTCTCCTGTTTGAAAGGGGGAAATGAGGAAGAGCAGATTGCT-GAGTTTGAAGT-----------------------------ACCTGGAAGCAAATGTTGTGGGGAAGGGAACTGCTGGACTTATCCATGTCATGGTT---TTTTTCTAG----TTCCTGACTGACCTCTAAAATTTT--AT----TTATATGATTTC--TTT--GCAT--AATTCAGCAAGACCTACATTGCATAGAAGACTGCTTTCCCAAATTGGAG-AGGACCTTCATAGAGAAAAAGAGAAGGGTGTTTTGTTTTCAGCTGTGATGAAACCCTA--AAGTGTGCGTA--------------AGAGAGAC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1223258 815 + 1231380 CATATTCGTAAATTTGCCAGTTAATTCAAATGATGTTACGGTTTTTAGATGTTTAGG---TGTGGTG---GTGT----CACTCA--GATGAGTCTGACTGTGTGTCATTCTTCTGTGCTGCAGCACCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAGAAGATTATTCATCAGGAAACTGTCAGCAAAAACGGAAACGGACTAAAGAACACCCCCAGGTTTAAGCGAAGGAGAGTTCGCCGCCGTCGAATGGAAACAATTGTCTTTTTGGACAAAGAAGTCTTTGCCAGTCGTATTTCCAACCCCTCAGATGACAACAGCTGTGAAGATTTGGAAGAGGAACGGAGGGAAGAAGAAGAGAAGACCCTGCCTGAAACAAAGCCAGACCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAGTCTCCGGTTTGAAAGGGGGAAATGAGGAAGAGCAGATTGCT-GAGTTTGAAGCTTGTGCTGCCTGTGTGCGGTTGAAGAGTGACCTGGAAGCAGATGATGTGGGGAAGGGAACTGCTGGACTCATCCACGTCATGGTT---TTTTTCTAG----TTCCTGATAGACCTCTAAAATTTT--GTTTAGTTGTATGATTTC--TTT--ACAT--AATTCAACAAGACCTACGTTGCATAGAAGACTGCTTTCCCAAATTGGAG-AGGATCTTCACAGAGAAAAAGATAAGGGTGTTTCTTTTTCAGCTATGATGAAACACTAGTAAGTGTGCATA--------------AGAGGGAC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2750359 808 + 11732439 CATATTCGTAAATTTGCCAGTTAATTCAAATGATGTTACGGTTTTTAGATGTTTAGG---TGTGGTG---GTGT----TGCTCA--GACGAGTCTGACTATGTGTCATTGTTTTGTGCTGCAGCACCAGTGGCAGTGCGCAGCCTCCAGGACTTGGCTCGCATCGCCATCCGGGGCACCATTAAGAAGATTATTCATCAGGAAACTGTCAGCAGAAACGGAAGTGGACTAAAGAACACCCCCAGGTTTAAGCGAAGGAGAGTTCGCCGCCGTCGGATGGAAACGATTGTCTTTTTGGACAAAGAAGTCTTCGCCAGTCGTATTTCCAACCCCTCAGATGACAACAGCTGCGAAGACTTGGAAGAGGAACGGAGGGAGGAAGAAGAGAAGACCCTGCCTGAAGCAAAGCCAGAGCCCCCAGTGAACTTCCTACGCCAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAGTAAGTCT---GTTTGAAAGGGGGAAGTGAGGAAGCGCAGATTGCT-GAGTTTGAGGTTCCTGCTGCCTGTGTGCCGTTGAAGAGTGACCTGGAAGCAGATGTTGTGGGGAAGGGAACTGCTGGACTCATCCACTTCATGGTT---TTTTTCTAG----TTCCTGATTGACCTCTAAAATTTT--GTTCAGTTGTATGATTTC--TTT--ACGT--AATTCAACAAGACTTACATTGCATAGAAGACTGCTTTCCCAAATTGGAG-AGGATCTTCATAGAG--AAAGAGAAGGGTGTTTCTTTTTCAGCTGTGATGAAGCACTA--AAGTGTGCGTA--------------AGAGAGAC i aotNan1.NW_018500483v1 I 326 I 16 s micMur3.chr18 56934931 814 + 57149010 CATATTTGTAAATTTGCCAGTGAATTCAAGTAACGTTAGGATTTTTAGGTGTTTAGGCTTTGTGGTG---GCGT----CACTTG--GATGCGTTTGACAG----TCTCTTCTTTGCACTGTAGCTCCAGTGGCAGTTCGCAGCCTCCAGGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAAAAGGTCATTCATCAGGAAACAGTGAGCAAAAATGGAAACGGACTAAAGAACACCCCCAGGTTTAAACGCAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAGGTCTTTGCCAGTCGGATTTCCAACCCCTCTGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGCGGGAAGAGGAAGAGAGGACCCCACCTGAAACAAAGCCAGACCCCCCTGTGAACTTCCTGCGCCAGAAAGTCCTGAGCCTCCCTCTACCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAATGTCCTGTTTGAGA-AGGGAAATGAGGAAGAGCAGATTGCC-AAGTCTGATGTGTGTGCCGCCTGTCTGCTGTGGA-GGGACACCTGGGAGCAGACGCTATGGGGAAGGGAACTGCTGTACTTGTCCACATTGTAGTCTTCTTTTTCTAG----TTCTTGATTGTCCTCTAAAATTTT-GATTCAGTGGTGTGATTTC--TTT--ACGT--AATCCGACAAGATCTACACTGCATAGAAGAATGTTTTCCCAAAGTGGAG-AGGATCTTCTTAGAGAAGGGTAGAAGGGTGTTTCTGTTTTAGTTCTGGTGAAACACTA--AAGTGTACATG--------------GTAGAGAC i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1924714 815 - 2029793 CATATTTGTAAATTTGCCAGCGAATTCAAATAACGTTAGGATTTTTAGGTGTTTAGGCTTTGTGGTG---GTGT----CACTCA--GATGCGTTTGACAG----TCTCGTCTTTGCACTGTAGCTCCAGTGGCAGTTCGCAGCCTCCAAGACTTGGCTCGCATTGCCATCCGGGGCACCATTAAGAAGGTCATTCATCAGGAAACAGTGAGCAAAAATGGAAACGGACTGAAGAACACCCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGGATGGAAACGATTGTCTTTTTGGACAAAGAGGTCTTTGCCAGTCGGATTTCCAACCCCTCTGATGACAACAGCTGTGAAGACTTGGAAGAGGAACGGCGGGAAGAAGAAGAGAGGACCCCCCCTGAAACGAAGCCAGACCCCCCTGTGAACTTCCTACGCCAGAAAGTCCTGAGCCTCCCTCTACCAGATCCCCTGAAATACTACTTGCTTTATTACAGAGAAAAATAAATCTCCTGTTTGAGA-AGGGAAATGAGGAAGAGCAGATTGCC-AAGTCTGATGTGTGTGCCGCCTGTCTGCTGCGGAGGGGACGCCTGGGAGCAGACGCTGTGGGGAAGGGAACTGCCATACTTGTCCACGTTGTAGTCTTCTTCTTCTAG----TTCTTGATTGTCCTCTAAAATTTT-GATTCAGTTGTGTGATTTC--TTT--ACAT--AATCTGACAAGATCTACACTGCATAGAAGAATGTTTTCCCAAAGTGGAG-AGGATCTTCTTAGAGAAGGGTAGAAGGGTGTTTCTTTTTTAGTTCTGGTGAAACACTA--AAGTGTACGTG--------------GTAGAGAC i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22924277 804 + 22939663 CTTATTTGTAAATTTGCCCGTGAATTCCAATAATGTTAGGATTTTTAGGAATTGAGGCGTTGTGGTG---GTGT----CTCTCA--GATGTGTTTGATCA----TCTGGTCTTTGTACTACAGCACCAGTGGCAGTTCGCAGTCTCCAGGACTTGGCTCGCATTGCTATCCGGGGCACCATTAAAAAGGTCATTCATCAGGAAACAGTGAGCAAAAATGGAAATGGACTAAAGAACACTCCCAGGTTTAAACGAAGGAGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAGGTCTTTGCCAGTCGGATTTCCAACCCCTCTGATGACAATAGCTGTGAAGACCTGGAAGACGAGCGGCAGGAAGAAGAAGAGAAGACCCCGCCGGAAAGAAAGCCAGATCCCCCTGTGAACTTCCTACGCCAGAAAGTCCTGAGCCTCCCTCTTCCAGATCCCCTTAAATACTATTTGCTTTATTACAGAGAAAAATAGGTCTCCTGTTTGAGA-AGGGAAGGGAGGAAGAGCAGATTGCC-AGGCCTGCTGTGTGTGCTGCCTGTCTGCTGTGGA-GGGTCATCTGGGAACAGGCGGCATGGGCAAGGGTACTGCTGTAC-TGGCCACATCATAGTCTTCTTTTTCTAG----TTCTTAAATGTCCTCTACAATTTT-GATTCAGTGGTGTGATTTC--TTT--ACGT--AATCCTATAAGACCTACTCTGCATAGAAGAATGTTTCCCCAAAGTAGAG-AGAATCTTCCTTG--------AGAAGGGTGTTTCTTTCTCAACTCCAGTGAAACACTG--AGGTGTGTGTG--------------GTAGAGA- i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181854873 656 + 182113224 CCTTTCAGCAAG--------------------------------TTAGATG---------TGGGTTG---GCCC----CACCCA----------TGCCCACAGGCTCTGCCCCTGT-CCACAGCACCACCAGCCGTGCGCAGCCTACAGGACCTGGCCCGGCTTGCTATCCGTGGCAGCATCAAGAGGGCTATGCGACAGGAAGC------CACAAGAGGAGGTGGCCTGAAGAACACACCTATGTTTAAAAGAAGGCGAGTCCGTCGCCGCAGAATGGAGACCATTGTCTTTTTGGACAAAGAGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAGGATGCAGAGGAGGATCGGCGGGAAGTGGCAGAGAGGACCTTACAGGAGACCAAGCCTGAGCCACCAGTGAACTTCCTTCGTCAGAGGGTATTGCGCCTCCCATTGCCTGATCCCCTGAAGTACTACCTGCTGTATTACAGGGAAAAGTGAG----CTGTGGGAGAGTGGG---------------------------------------------------------------ACCAGGATACCCA----------GAGGAAACTGCTGGCCAGGTACATGTCTT---TTCCCTTTCTTGG----TTCCTGTCTGTGCTCTAAAACTTCCCATGTAATGGTGTGATTTA--TTT--AAGTACAGTCTAACAAGA----AACTGCATAGAATTATTTTCTTTGGGGGTGGGGTGGGATGTGCAT-----------------------CTTTTTGGCTCTACTGTAACTTGA--A------CTCA--------------TTGGGAAC i mm10.chr2 I 2 C 0 s canFam3.chr24 47669211 774 + 47698779 -----CTGTAAATAGCCCCGCGAATGGCAGTGACCGGTGGGCTCTCCAGAGTCAGGGCCCTGTCCTGTGTGGGT----CGCTCACACATGAGGTTGACACTCTC---CTCCTTTGCTCCACAGCGCCGCTGGCCGTGCGAAGCCTCCAGGACCTGGCTCGCATCGCCATCCGGGCCACCATTAAAAAGGTCATCCGTCAGGAGACCGTGAGCAGCGGCGGGAACGGACTGAAGAACACTCCCAGGGCCAAGCGCAGGAGAGTGCGCCGCCGCCGCATGGAGACCATCGTCTTTTTGGACAAAGAGGTATTTGCCAGTCGGATCTCCAGCCCCTCTGATGACAACAGCTGTGAGGACTTGGAAGAGGAACAGCGG---GAGGAGGACAAGGCCCCGCCGGAAACGAAGCCAGCCCCGCCAGTGAACTTCCTGCGCGAGAAGGTCCTGAGCCTCCCCCTGCCCGATCCCCTAAAATACTACCTGCTGTACTACCGAGAGAAGTAAGTCT-----------GCGGGCACCGATTGGAGGCAGA---------ACCGAAGGCTGTGCCCCT----CGCCCTCGCCGGGCCACGTGG--GCACATGCTGTGGGGAAGG-AGGTGCGGTCCTC-TCCACCTTTCTGTT---TTCAGTTTG----TTCTTGGTTTTCCTCTAGAATTCC-CACTCATTGGTATCATTTCAGCTA--ACAT--AATCTGACAA-ACACAAGGTGCATAGGAGAATGTTTTCTCAAAAGGGAG-AGAATCTCCT---------GGAGAAGGGTGTTTGCTTTTT-GCTCTGGTGAAACTCTG--ACCTCTGCGCG---------------CAGAGAC i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 354701 798 - 397369 CATATTCGTAAACACACCAGTGATTTTAAACAATTTTA-GATGTTTAGATATTTAGCC--TTTTATC---ACCTCCACCACTCA-GGAAGAGTATAATCACATTTCATTCTTATGTGTCCTAGCTCCACTCGCAGTTCGCAGCCTCCAGGATTTAGCTCGCATAGCAATCCGGGGTACTATTAAGAAGATAATTCACCAGGAAACAATGAGCAAAAATGGAAATGGACTCAAGAATACTCCCAGGTTTAAACGAAGGCGAGTTCGCCGCCGTCGAATGGAAACGATTGTCTTTTTGGACAAAGAGGTCTTTGCTAGTCGAATTTCCAACCCCTCTGACGACAACAATTGTGAAGACCCCGAAGACGAACGGCGGGATGAAGAAGAAAAGACCTCCCCAGAAACGAAGCCGGACCCCCCAGTTAACTTTCTACGTGAGAAGGTCCTGAGCCTCCCTCTGCCAGATCCCCTGAAATACTACCTGCTGTATTACAGAGAAAAATAAGTCTCTTGCTTGAAAAGGGCAACTGGGGAAAAGGAGGTTGCTGGAGTATGACACCTGTGCCACCTGC------------------------ACAGACAGAATGGAGAAGGAGCCTGCTGTGCCCGTCAGCTTC---------TCTTTCCAGTTTATTCTTGGTTGTCCTCTAAAATTTT-CATTGAGTAGTGTGATTTC--TTTAAAAAT--AACCTGACAA-ATGTAAACTGCATAGAAGTATGTTTTTGCAAAGGGGTG-AGAATCTCCC---------ACAGAAAG-TGTTTATATTT-AACTCTGATGAAACACTG--AATTTAATGTGTTTTAGGCAGCACCATAGAGAC i dasNov3.JH569290 C 0 C 0 a score=224404.000000 s hg38.chr20_KI270870v1_alt 182512 22 + 183433 TGTTTGATGACCGTCCCTCATG s panTro5.chr20 66518800 22 + 66533130 TGTTCGATGACCGTCCCTCATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62183873 22 + 62195757 TGTTTGATGACCGTCCCTCATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 570540 22 - 578057 TGTTTGATGACCGTCCCTCATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110092253 22 - 110113093 TGTTTGATGACCGTCCCTCATA i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92832305 22 - 92844088 TGTTTGACGACCGTCCCTCATA i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96497973 22 + 96509753 TGTTTGACGACCGTCCCTCATA i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16967682 22 - 16982598 TGTTTGACGACCGTCCCTCATA i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3769729 22 - 3785965 TGTTTGACGACCGTCCCTTATA i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90359765 22 - 90373283 TGTTTGATGACTGTCCCTCATA i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 160424 22 - 179258 TGTTTGACGACCGTCCCTCATA i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5629573 22 - 5823884 TGTTTGACGACCGTCCCTCACA i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58187490 18 + 159171411 ----TGATGACCATTTCTGATA i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16349985 18 + 16356641 ----TGATGACCATTTCTGATA i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1224073 18 + 1231380 ----TGACGACCATTTCTGATA i cebCap1.NW_016107870v1 C 0 C 0 s micMur3.chr18 56935745 22 + 57149010 TATTTGATGTCTGTCCATTTCA i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1925529 22 - 2029793 TGTTTGATGTCTATCCGTGTCA i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22925081 18 + 22939663 ---GTGATGACTCTTCCT-TCA i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181855529 22 + 182113224 TGCATGATGTCTGCTCCTTATA i mm10.chr2 C 0 C 0 s canFam3.chr24 47669986 22 + 47698779 GCTTTGGTGACCGTCTCCCACC i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 355499 22 - 397369 TGCATGATGGCTACTTCTCATA i dasNov3.JH569290 C 0 C 0 e aotNan1.NW_018500483v1 2751167 16 + 11732439 I a score=4365834.000000 s hg38.chr20_KI270870v1_alt 182534 296 + 183433 CAACATGCACG------G-TACTCACTAAAAATGAAA-ACTGAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATAAAATCTTTTCTGGGTGTGACGCACCTGCGTCCAAGTTTGAATTTTTATGATATGTACCACTTAATTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TGATTAAATCTT-ATGTG-AGTTGCCAGTTGTAATTTTTCAAAGGAA---AAATTTTGATG-- s panTro5.chr20 66518822 296 + 66533130 CAACATGCACG------G-TACTCACTAAAAATGAAA-ACTGAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATAAAATCTTTTCTGGGTGTGACGCACCTGCGTCCAAGTTTGAATTTTTATGATATGTGCCACTTAATTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TGATTAAATCTT-ATGTG-AGTTGCCAGTTGTAATTTTTCAAAGGAA---AAATTTTGATG-- i panTro5.chr20 C 0 C 0 s panPan2.chr20 62183895 296 + 62195757 CAACATGCACG------G-TACTCACTAAAAATGAAA-ACTGAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATAAAATCTTTTCTGGGTGTGACGCACCTGCGTCCAAGTTTGAATTTTCATGATATGTGCCACTTAATTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TGATTAAATCTT-ATGTG-AGTTGCCAGTTGTAATTTTTCAAAGGAA---AAATTTTGATG-- i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 570562 296 - 578057 CAACATGCACG------G-TACTCACTAAAAATGAAA-ACTGAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATAAAATCTTTTCTGGGTGTGACGCACCTGCGTCCAAGTTTGAATTTTTATGATATGTGCCACTTAATTACTGGCACTGAGTATCGCTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TGATTAAATCTT-ATGTG-AGTTGCCAGTTGTAATTTTTCAAAGGAA---AAATTTTGATG-- i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110092275 289 - 110113093 CGACACGCACG-----------TTACTAAAAATGAAA-ACTGAAGT-GAAAC-TAACCTGTGTTGCTTGTAAAGTGTG----AAAGCACAAGCTTACAAATGTATAAAATCTTTTCTGGGTGTGACGTACCTGCGTCCAAGTTTGAATTTTTATGATATGTGCCACTTAGTTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCCAG-TG-GGGAAACA-TACTGAGAAGCCCTCCCTTA-CTTAAGTAAGT-TAATTAAATCTT-ATGTG-AGTTATCAGTTGTAATTTTTCAAAGGAA---AAATTTTGATA-- i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92832327 296 - 92844088 CAACATGCACG------T-TACTCCCTAAAGATGAAA-ACCAAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATGAAATCTTTTCTGGGTGTGACGCACCTGCATCCAAGTTTGAATTTTTATGATACGTGCCACTTAGTTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TAATTAAATCTT-ATGTG-AGTTGTCAGTTGAAATTTTTCAAAGGAA---AAATTTTGATG-- i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96497995 296 + 96509753 CAACATGCACG------T-TACTCCCTAAAGATGAAA-ACCAAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATGAAATCTTTTCTGGGTGTGACGCACCTGCATCCAAGTTTGAATTTTTATGATACGTGCCACTTAGTTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TAATTAAATCTT-ATGTG-AGTTGTCAGTTGAAATTTTTCAAAGGAA---AAATTTTGATG-- i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16967704 296 - 16982598 CAACATGCACG------T-TACTCCCTAAAGATGAAA-ACCGAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATGAAATCTTTTCTGGGTGTGACGCACCTGCATCCAAGTTTGAATTTTTATGATACGTGCCACTTAGTTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TAATTAAATCTT-ATGTG-AGTTGTCAGTTGAAATTTTTCAAAGGAA---AAATTTTGATG-- i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3769751 296 - 3785965 CAACATGCACG------T-TACTCCCTAAAGATGAAA-ACCAAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATGAAATCTTTTCTGGGTGTGACGCACCTGCATCCAAGTTTGAATTTTTATGATACGTGCCACTTAGTTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGGCCTCCCTTATTTTAAGTAAGT-TAATTAAATCTT-ATGTG-AGTTGTCAGTTGAAATTTTTCAAAGGAA---AAATTTTGATG-- i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90359787 296 - 90373283 CAACATGCACG------T-TACTCCCTAAAGATGAAA-ACCGAAGTGGAAAG-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATGAAATCTTTTCTGGGTGTGACGCACCTGCATCCAAGTTTGAATTTTTATGGTATGTGCCACTTAGTTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TAATTAAATCTT-ATGTG-AGTTGTCAGTTGAAATTTTTCAAAGGAA---AAATTTTGATG-- i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 160446 296 - 179258 CAACATGCACG------T-TACTCCCTAAAGATGAAA-ACCGAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATGAAATCTTTTCTGGGTGTGACGCACCTGCATCCAAGTTTGAATTTTTATGATACGTGCCACTTAGTTACTGGCACTGAGTATCACTGAATTTCTTAGTTTTCTAG-TG-GGGAAACATTACTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TAATTAAATCTT-ATGTG-AGTTGTCAGTTGAAAATTTTCAAAGGAA---AAATTTTGATG-- i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5629595 293 - 5823884 CAACATGCACG------T-TACTTCCTAAAAATGAAA-ACCGAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATGAAATCTTTTCTGGGTGTGACGCACCTGCATCCAAGTTTGAATTTTTATGATATGTGCCACTTAGTTACTGGCACTGAGTATCACTGAATT--TTAG-TTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TAGTTAAATCTT-ATGTG-AGTTGTCAGTTGTAATTTTTCAAAGGAA---AAATTTTGATG-- i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58187508 295 + 159171411 CAACATGCATG------T-TACTCACTATAAATGAAA-ACTGAAGTGGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATAAAATCTTTCGCGGGTATGACACACCTGTGTCCAAGTTTGAATTTTTACGATATGTGCCACTTAATTACTGGCACGGAGTATCACTGAACTTGTTAGTTT-CTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGG-TAATTAAATCTT-AGGCG-AGTTGTCAGTTGTAATTTTTCAAAGGAA---AAATTTTGATG-- i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16350003 297 + 16356641 CAACATGCATG------T-TACTCACGATAAATGAAA-ACCGAAGTGGAAACTTAACTTGTGTTGCTTATAAAGTATG----AAAGCACAAGCTTATAAATGTATACAATCTTTTGCGGGTGTGACACACCTGTGTCCAAGTTTGAATTTTTATGATACGTGCCACTTAATTACTGGCACAGAGTATCACTGAACTTGTTAGTTTGCTAG-TG-GGGACACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TAATTAAATCTT-ATGCG-AGTTGTCAGGTGTAATTTTTCAAAGGAA---AAATTTTGATG-- i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1224091 296 + 1231380 CAACATGCACG------T-TACTCACTATAAATGAAA-ACTGAAGTAGAAAC-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAATGTATACAATCTTTCGTGGGTGTGACACACCTGTGTCCAAGTTTGAATTTTTATGATATGTGCCACTTATTTACTGGCACAGAGCATCACTGAACTTGTTAGTTTTCTAG-TG-GGGAAACATTATGGAGAAGCCCTCCCTTATTTTAAGTAACT-TAATTAAATCTT-ATGTG-AGTTGTCAGGTGTAATTTTTCAAAGGAA---AATTTTTGATG-- i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2751183 296 + 11732439 CAACATGCGCG------T-TACTCACTATAAATGAAA-ACTGAAGTGGAAAG-TAACCTGTGTTGCTTATAAAGTGTG----AAAGCACAAGCTTATAAGTGTATAAAATCTTCCGTGGGTGTGACACACCTGTGTCCAAGTTTGAATTTTTATGATACGTGCCACTTAATTACTGGCACGGAGTATCACTGAACTCGTTAGTTTTCTAG-TG-GGGAAACATTATTGAGAAGCCCTCCCTTATTTTAAGTAAGT-TAATTAAATCTT-ATTCG-AGTTGTCAGTTGTAATTTCTCAAAGGAA---AAATTTTGATG-- i aotNan1.NW_018500483v1 I 16 C 0 s micMur3.chr18 56935767 297 + 57149010 CAAGATGCACAAGA-TTT-TATGCATTAAAAATGAAA-ACTGAAGTTGAAAC-TAACCTGTGTTGCTTATAAAGTATGAAACAAAGCACCAGTTTGTAAATGTATACAATTTTTTCCGGGTATGATACACCTATGTCCAAGTTTGAATTTT-ATGATAACAACCTCTTAATTACTGGCACTGAGTTTCACTGAA---CTTAGTTTTCTAGAGG-GGAAAACATTATTGAGAAGCCTTCCCTGATTTTAAGTAAAT-TAATTAATTCTT-AT------TTGTCAATTATAATTTTTAAAAGGAA---AAATTGTGATG-- i micMur3.chr18 C 0 I 79 s proCoq1.NW_012150197v1 1925551 301 - 2029793 CAAGATGCACAAGATTTT-TATGCATTAAAAATGAAA-ACTGAAGTTGAAAC-TAACCTGTGTTGCTTATAAAGTGTGAAACAAAGCACCAGTTTGTAAATGTATAAAATTTTCTCTGGGTACGACACACCTGTGTCCAAGTTTGAATTTT-AGGATAACAACCGCTTCATTACTGGCACTGAGTTTCACTGAACTTCTTAGTTTTCTAGATG-GGAAAACATTATTGAGAAGCCTTCCCTTATTTTAAGTAAAT-TAATTAATTCTT-AC------TTGTCAATTCTAATTTTTAAAAGGAA---AAATTGTGACG-- i proCoq1.NW_012150197v1 C 0 I 1 s otoGar3.GL873542 22925099 282 + 22939663 CAGGATGCACA----TTT-TATGCGTTAAAAATGAAA-ATTTAAGGTGTAAC-TGACCTGTGTTACTTATAAAGTGTG----AAAACAACAGTTTATAAATGTATAAAATCTCTTTGGGGTATGACACACCTATGCCCAAGTTTGAATTTT------------CTTTTAATTACTGGCACAGAGTTTCACTGAACTTCTTAGTTCTCTAGAGG-GGAAAACATTAGTGAGAAGCCTTTGCTTATTTTAAGTAAAT-TATTTAAGTCTC-AT------TTGTCAATTGTAAATTTTAAAAGGAA---AAATTGTGATG-- i otoGar3.GL873542 C 0 I 1 s mm10.chr2 181855551 238 + 182113224 ---GAGGCAAG------C-TTTCACATTGAGACTTGA-ATTAAATTTGATTG-GATCCTGTGT----------GAGGC----AAGGGGCAAGTCTGTAAA------------------GGTGTGACACACCACCACGCAAATTTCA--TGTGATGGT---------TCTATTGCTGGC---------CTCTGACTTTTGCCTTTTTCTAT-------------GCTCAGAAAATCCTCCCTTATTTAAATCAAAC-TAATCAAATATT-ATGTGAAATAATCATCCATAATTTTTTAAAGAAAAAGAAAATGAGATA-- i mm10.chr2 C 0 I 1 s canFam3.chr24 47670008 304 + 47698779 CAAGACACACA------TGTCTGCGTTACTCATGAAGCAGTGAAGTTGAAAG-TAACCTGTGTTGCTCATAAAATGTGAAAGAAAGCACAAGTTTGCAAGTGTGTAAAGTCTTTCCTGGGTGTGACACACCTGTGTCCAAGTTAGAACTTT-ATAGTACCAACCTCATAATTACTGGCGCTGAGCCCCACTCACCCTTTTAGTTCTCTGG-AGCGGGGAAGATTATTGAAAAGCTCTCCTTTATTTTAAATGAATGTGATTAAATCTTAATGTG-AGTTGTCGATTGTAATTTTAAAAGAAGG---AAATTGTGATG-- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 355521 296 - 397369 CAAGATACACA----CGC-TGTGCATTTAAAATGAAA-ACTGCAACGGAAAT------TGTTTTGCTTATAATATGTGAAAGAAAGCACAAGTCTGTAATTGTGTAAAATCTTTTCTGGGTGTGATAAACCTATATCCAAGTTTGAATTTT-ATGTTATCTGCCTCTTTGTTGCTGGTATTGAATTTCACTAAACTTTTTAGTTTTCTAG-AA-GGGGATCATT-TTGAAAAGCCCTC-Cttattttaattaaat-taattaaatCTT-ATGTG-AGTTGTTAATTGTAATTTTTAAAAGGAA---AAATTGTGATTGT i dasNov3.JH569290 C 0 C 0 a score=710467.000000 s hg38.chr20_KI270870v1_alt 182830 83 + 183433 GGGTGGAGGAAT---------GAATTGCCAGATAATCTTTCTGGAATTCCGAGAGAATTCCAAAGAGGGt----tttttttttttttttt----------AGGAC-A s panTro5.chr20 66519118 90 + 66533130 GGGTGGAGGAAT---------GAATTGCCAGATAATCTTTCTGGAATTCCGGGAGAATTCCAAGGAGGGt----tttttttttttttttt---ttttttAAGGAC-A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62184191 86 + 62195757 GGGTGGAGGAAT---------GAATTGCCAGATAATCTTTCTGGAATTCCGGGAGAATTCCAAGGAGGGG----tttttttttttttttt-------ttAAGGAC-A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 570858 92 - 578057 GGGTGGAGGAAT---------GAATTGCCAGATAATCTTTCTGGAATTCCGGGAGAATTCCAAAGAGGtt----tttttttttttttttt-tttttttttAGGAC-A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110092564 93 - 110113093 GGGTGGAGGAAT---------GAATTGCCAGATAATCTTTCTGGAATTCTGGGAGAATTCCAAAGAGGtt----ttttttttttttttttttttttttttATGAC-A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92832623 89 - 92844088 GGGTGGAGGAAT---------GAACTGCCAAATAATCTTTCTGGAATTCCGGGAGAATTCCAAAGAGGGt----tttgtttttttttttt----tttttAATGAC-A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96498291 89 + 96509753 GGGTGGAGGAAT---------GAACTGCCAAATAATCTTTCTGGAATTCCGGGAGAATTCCAAAGAGGGt----tttgtttttttttttt----tttttAATGAC-A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16968000 81 - 16982598 GGGTGGAGGAAT---------GAACTGCCAAATAATCTTTCTGGAATTCTGGGAGAATTCCAAAGAGGG------------TTTTTTTTT----TTTTTAATGAC-A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3770047 84 - 3785965 GGGTGGAGGAAT---------GAACTGCCAAATAATCTTTCTGGAATTCCGGGAGAATTCCAAAGAGGG---------GTTTTTTTTTTT----TTTTAAATGAC-A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90360083 82 - 90373283 GGGTGGAGGAAT---------GAACTGCCAAATAATCTTTCTGGAATTCCGGGAGAATTCCAAAGAGGG-----------TTTTTTTTTT----TTTTTAATGAC-A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 160742 84 - 179258 GGGTGGAGGAAT---------GAACTGCCAAATAATCTTTCTGGAATTCCGGGAGAATTCCAAAGAGGG---------tttttttttttt----tttttAATGAC-A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5629888 88 - 5823884 GGGTGGAGGAAT---------GAACTGCCAGATAATCTTTCTGGAATTCCAGGAGAATTCCAAAGAGGt-----tttttttttttttttt----tttttAATGAC-A i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58187803 90 + 159171411 GGGTGGAGGAAT---------GAACAGCCAGGTAATCTTTCTGGAATTCC---AGAATTCTAAAGAGGTTTTTGTTTTGTTTTTTGTTTT----TTTTTGACACC-T i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16350300 89 + 16356641 GGGTGGAGGAAT---------GAACAGCCAGGTAATCTTTCTGGAATTCCAGGAGAATTCCAAAGAGGTT----TTTTGTATCTTTTTTT----TTTTTGACACC-T i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1224387 93 + 1231380 GGGTGGAGGAAT---------GAACAGCCAGGTAATCTTTCTGGAATTCCAGGAGAATTCCAAAGAGGGttttttttttttttttttttt----ttttttttttt-t i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2751479 77 + 11732439 GGGTGGAGGAAC---------GAACAGCCAGGTAATCCTTCTGGAATTCCAGGAGAATTCCAAAGAGGTT----------------TTTT----TTTTTGACACC-T i aotNan1.NW_018500483v1 C 0 C 0 s proCoq1.NW_012150197v1 1925853 78 - 2029793 GGGAGGAAGAATAAAA-TATCAAATTGCGGGATATCTTTCTGGGAATTCCAAAAGAATTTCAGGGAG----------------TCTTTTT----------CTGAC-- i proCoq1.NW_012150197v1 I 1 C 0 s otoGar3.GL873542 22925382 85 + 22939663 GGGAGGAAGAATAAAA-GATCAAACTGCCAGATGTCTTTTCTGGAATTCCAAAAGAATTTCAAGGAG----------------TTGTTTT----TTTCCCCTGACC- i otoGar3.GL873542 I 1 I 4 s mm10.chr2 181855790 82 + 182113224 AGAAGGAGGAATAATG-TATAGAAATGCCAGATA-TCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCG----ATCCTCCCCTGATT------------------- i mm10.chr2 I 1 C 0 s canFam3.chr24 47670312 78 + 47698779 GGGAGGAGGAATAAAAGTATCAAACTGCCAGATG-TCTCTCTCGAATTCTGAAATAA-TCCAAGGAA-------------------TATT----TTCCTGACA---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 355817 80 - 397369 GGGAGGAGGAATAAAAGTATCATACTATCAGATG-TCTTTCTGGAATTC--AAAAGACTCCAAAGGAATT----------------TTTT----TTCCTGGCA---- i dasNov3.JH569290 C 0 C 0 e micMur3.chr18 56936064 79 + 57149010 I a score=2232146.000000 s hg38.chr20_KI270870v1_alt 182913 215 + 183433 TCT------------------------------------------------TTTGATACCTTTAAAAGAACCACTGTCAAGTAATCCTTAAAAGAATATCTTGGAAAAGGAAACAGATTTTTTCCTG--------------------------------------------------------------------------------------------------TGTGT-AAGCAATAAGTGAAGTTACATTTGCCCTAA----CCCTAGGGATGATT-CTTTACCCAGTTTTAAAGCCCATCATGGTATTCTAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTCGAAAATATT-----------------------------AAATAGACTG s panTro5.chr20 66519208 216 + 66533130 TCT------------------------------------------------TTTGATACCTTTAAAAGAACCACTGTCAAGTAATCCTTAAAAGAATATCTTGGAAAAGGAAACAGATTTTTTCCTG--------------------------------------------------------------------------------------------------TGTGTAAAGCAATAAGTGAAGTTACATTTGCCCTAA----CCCTAGGGATGATT-CTTTACCCAGTTTTAAAGCCCATCATGGTATTCTAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTCGAAAATGTT-----------------------------AAATAGACTG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62184277 216 + 62195757 TCT------------------------------------------------TTTGATACCTTTAAAAGAACCACTGTCAAGTAATCCTTAAAAGAATATCTTGGAAAAGGAAACAGATTTTTTCCTG--------------------------------------------------------------------------------------------------TGTGTAAAGCAATAAGTGAAGTTACATTTGCCCTAA----CCCTAGGGATGATT-CTTTACCCAGTTTTAAAGCCCATCATGGTATTCTAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTCGAAAATGTT-----------------------------AAATAGACTG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 570950 244 - 578057 TCT------------------------------------------------TTTGATACCTTTAAAAGAACCACTGTCAAGTAATCCTTAAAAGAATATCTTGGAAAAGGAAACAGATTTTTTCCTG--------------------------------------------------------------------------------------------------TGTGT-AAGCAGTAAGTGAAGTTACATTTGCCCTAA----CCCTAGGGATGATT-CTTTACCCAGTTTTAAAGCCCATCATGGTATTCTAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTAGAAAATATTAAATAGACTGGGGACTCCAGGTAGGAAGGAAATAGACTG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110092657 243 - 110113093 TCT------------------------------------------------TTTGATACCTTTAAAAGAAGCACTGTCAAGTAATCCTTAAAATAATATCCTGGAAAAGGAAGCAAATTATTTCCTG--------------------------------------------------------------------------------------------------CGTGT-AAGCAATAAGTGAACTTACATTTGCCCTAA----CCCTAGGGATGATT-CTTTACCCAGTTTTAAAGCCGATCATGGTTTTCTAAGGTGTTGACA-CCTCCATCCTCAGAGCAGGCAGAAAGTATCAAATAGACTGAGGACTCTAGGTAGAAAGGAAAGAGACTG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92832712 217 - 92844088 TGT------------------------------------------------TTTGATACCT--------------------------TTAAAAGAATATCCTGGAAAAGGAAGCGAATTTTTTTCTG--------------------------------------------------------------------------------------------------TGTGT-GAGCAATAAGCGAAGTTACATGTGCCGTAA----CCGTAGGGATGCTT-CTGTACCCAGTTTTAAAGATCATCATGGTTTTCTAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTAGAAAGTGTTAAATAGACTG-GGACTCTAGGTAGAAAGGAATTAGACTG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96498380 217 + 96509753 TGT------------------------------------------------TTTGATACCT--------------------------TTAAAAGAATATCCTGGAAAAGGAAGCGAATTTTTTTCTG--------------------------------------------------------------------------------------------------TGTGT-GAGCAATAAGCGAAGTTACATGTGCCGTAA----CCGTAGGGATGCTT-CTGTACCCAGTTTTAAAGATCATCATGGTTTTCTAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTAGAAAGTGTTAAATAGACTG-GGACTCTAGGTAGAAAGGAATTAGACTG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16968081 217 - 16982598 TGT------------------------------------------------TTTGATACCT--------------------------TTAAAAGAATATCCTGGAAAAGGAAGCGAATTTTTTTCTG--------------------------------------------------------------------------------------------------TGTGT-GAGCAATAAGCGAAGTTACATGTGCCGTAA----CCGTAGGGATGATT-CTGTGCCCAGTTTTAAAGATCATCATGGTTTTCTAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTAGAAAGTGTTAAATAGACTG-GGACTCTAGGTAGAAAGGAATTAGACTG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3770131 217 - 3785965 TGT------------------------------------------------TTTGATACCT--------------------------TTAAAAGAATATCCTGGAAAAGGAAGCAAATTTTTTTCTG--------------------------------------------------------------------------------------------------TGTGT-GAGCAATAAGCGAAGTTACATGTGCCGTAA----CCGTAGGGATGATT-CTGTACCCAGTTTTAAAGATCATCATGGTTTTCTAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTAGAAAGTGTTAAATAGACTG-GGACTCTAGGTAGAAAGGAATTAGACTG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90360165 229 - 90373283 TGT------------------------------------------------TTTGATACCTTTAAAAGAATTACTGCCAAGTAATCCTTAAAAGAATATCCTGGAAAAGGAAGCGAATTTTTTTCTG--------------------------------------------------------------------------------------------------TGTGT-GAGCAATAAGCGAAGTTACATGTGCCGTAA----CCATAGGGATGATT-CTTTACCCAGTTTTAAAGATCATCATGGTTTTCTAAGGTGTTGACACCCTCCATCCTTAGAGCAGG--------------TAGACTG-GGACTCTAGGTAGAAAGGAATTAGACTG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 160826 217 - 179258 TGT------------------------------------------------TTTGATACCT--------------------------TTAAAAGAATATCCTGGAAAAGGAAGCGAATTTTTTTCTG--------------------------------------------------------------------------------------------------TGTGT-GAGCAATAAGCGAAGTTACATGTGCCGTAA----CCTTGGGGATGATT-CTGTACCCAGTTTTAAAGATCATCATGGTTTTCTAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTAGAAAGTGTTAAATAGACTG-GGACTCTAGGTAGAAAGGAATTAGACTG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5629976 243 - 5823884 TCT------------------------------------------------TTTGATACCTTTAAAAGAATTACTGCCACGTAATCCTTAAAAGAATATCCTGGAAAAGGAAGCGAGTTTTTTCCTG--------------------------------------------------------------------------------------------------TGTGT-GAGCAGTAAGCGAAGGTGCATGTGCCGTAA----CCTTAGGGATGATT-CTTTACCCAGGTTTAAAGATCATCATGGTTTTCCAAGGTGTTGACACCCTCCATCCTCAGAGCAGGTAGAAAGTGTTAAATAGACTG-GGACTCGAGGTAGAAAGGAATTAGACTG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58187893 205 + 159171411 TCT------------------------------------------------TTTGATATCTTTAAAAGAACCACTGTCAAGTCATCCTTAAAAGAATATCCTCGAAAATGAAGCAAGTTTTTTCCTG--------------------------------------------------------------------------------------------------CGTGT-AAGCAGTAAGCAAAGTTACATTTGCCCTAA----CTGCAGGGATGATT-CTTTACCCAATTTT---------------------AGGTGTTGACACCCTCCATCCTCAGAACAGGTAGAAAGTATTA----------GGCCTGCAGG--------AAATAGAATC i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16350389 303 + 16356641 TCT------------------------------------------------TTTGATATCTTTAAAAGAACCACTGTCAAGTAATCCTTAAAAGAATATCCTGGAAAATGAAGGAAGTTTTTTCCTGCGTGTGAGCAGTAAGCAAAGTGACATCTGCCCTGACCGCAGGGATGATTCGTGTGAGCAGTAAGCAAAGTGACGTCTGCCCTGACCGCAGGGATGATTCGTGT-GAGCAGTAAGCAAAGTGACATCTGCCCTGA----CCGCAGGGATGATT-CTTTACCCAGCTTC---------------------AGGTGTTGACACCCCCCATCCTCTGAACAAGTAGAAAGCATTA----------GGAGTGCAGG--------AAGTAGATTC i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1224480 252 + 1231380 ttttttttttttttttttttttttttttttttttttttttttttttttttNTTTGATATCTTTAAAAGAACCACTGTCAAGTAACCCTTAAAAGAATATCCTGGAAAATAAAGCAAGTTTTTTCCTG--------------------------------------------------------------------------------------------------CGTGT-GAGCAGTAAGCAAAGTTATATTTGCCCTAA----CTGTAGGGATGATT-CTTTACTCAATTTT---------------------AGGTGTTGACACCCTCCATCCTAAGAACAGGT-GGAAGTATTA----------GGAGTGCAAG--------AAATAGATTC i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2751556 205 + 11732439 TCT------------------------------------------------TTTGATAACTTTAAAATAACCACTGTCAAGTAATCCTTAAAAGAATATCCTGGAAAATGAAGTAAGTTTTTTCCTG--------------------------------------------------------------------------------------------------CGTGT-AAGCAGTAAGCAGAGTTACATTTGCCCTAA----CTGTAGGGATGATT-CTTTACCCAATTTT---------------------AGGTGTTGACACCCTCCATCCTCAGAACAGGTAGAAAGTATTA----------GGAGTGCAGG--------AAATAGATTC i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56936143 225 + 57149010 CCC------------------------------------------------TTTGTTACCTTTAAAAGAACCACTGTCAAGTAATCCCTAAAAGAATATCCTGAAAAAAGAAACAAGTTTTTCTGTG--------------------------------------------------------------------------------------------------CGTGT-AAGTAGTAAGGTAAACTACTTTTACCGTAA----CCATAGAGATGTTT-ATTTACCCAACTTTAAAGACTGTAACGGGTTTCT-AGGTGTCGACACACTCAATCCTTAGAACAGGTGGAAAATATTA----------AGACGGCAGG--------AAATAGATTG i micMur3.chr18 I 79 C 0 s proCoq1.NW_012150197v1 1925931 219 - 2029793 CCC------------------------------------------------TTTGTTACCTTTGAAAGAACCACTGTCAAGTAATCCCTGAAGGAATATCCTGAAAAAGGAAACAAGTTTTTCTGTG--------------------------------------------------------------------------------------------------TGCGT-AAGTAGTAAGGTAAA------TTACCCTAA----CCGTAGGGATGATT-ATTTACCCAACTTTAAAGACTGTAACAGGTTTCT-AGGTGTTGACACACTAAATCCTTAGAACAGGTAGAAAATATTA----------AGATGGCAGG--------AAATAGATGG i proCoq1.NW_012150197v1 C 0 C 0 s otoGar3.GL873542 22925471 224 + 22939663 TTT------------------------------------------------TTTTTTACCTTTAAAAGAACCACTGTCAAGTAATCCTTAAAAGAGTATCCTGAAAAATGAAACAAATTTTCTTCTG--------------------------------------------------------------------------------------------------TGTGT-TAGTAATAAGCTAAATTACTTTAACCCTAA----CCATAGGGATGATT-ATTTACCCAACTTTAAAGACCAT-ACGGGTTTCT-AGGTGTTGACATATTCAATCCTTAGAGCAGGTAGAAAATATTA----------AGATGGCAGG--------AAATAGATTG i otoGar3.GL873542 I 4 C 0 s mm10.chr2 181855872 141 + 182113224 CCT------------------------------------------------TCTGATG-CTTTATAGGAACCACCATCAAGTGATC-------------------------------TCTTTTTCTG--------------------------------------------------------------------------------------------------AGAGG-AA----------AAGTT----TTTCCTGAA----CCATCGCAGTGATT-CATGAGTCAGTTCTA--------------------AGGTATCTACATGAG-AATTTTCGGTGCAGGTGGAG-----------------AGACTGCAG------------------- i mm10.chr2 C 0 C 0 s canFam3.chr24 47670390 216 + 47698779 CCT------------------------------------------------TTTCTTACCTTTAGAAGAACGAGTGGCAGATAATTCCTTA--GAATAGACTCAACAATGAAACAGGTGT-----TG--------------------------------------------------------------------------------------------------TGTGT-----AATAA--------ACTTTTACCCCAAGGGTAGGTAGGGATGACTGGTTGACCCAAGCTTGAATATGCTAATGGGCACCTAAGGCATCTATGTGCTCCTTCCTCAAAACAGGTGGAAAGTATTCATTA------AAAATGCAGG--------AACTGCATTG i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 355897 221 - 397369 CCT------------------------------------------------TTTGTTACCTTTAAAAGGACCAATGTCTAGTAATCCCTAAAAGAATATCCTGAAAAATGAGACAAGTTGTG---TG--------------------------------------------------------------------------------------------------TGTTT-AACTAATAAGCTAAATTAATTTTACTCAAA----CAGAAGGAATGATT-ATTTACCCAACATTAATGACTGTTAAGAGTTTCTAAGGCACTGACAAGCTGGTTTCTCCTAACAGGTGGGAAGTATCA----------AGACT--AGG--------AAATTAACTG i dasNov3.JH569290 C 0 I 438 a score=3893106.000000 s hg38.chr20_KI270870v1_alt 183128 246 + 183433 GGGACTCTATGATGGGCAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATT--AGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAA--AGATTTGTTAGTTTTGTAATTTTTTTGTAAGACCAAATGTATGTATTTTAGTAGC--------TCCATTGCATGAGAAGAGTG-TAACTCACACTGACTTGTGATATCAGCCTTCTCTGGGCCTT-GTG--------TGTGGAGAGCTTTCTATCTT s panTro5.chr20 66519424 248 + 66533130 GGGACTCTATGATGGGCAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATT--AGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATTTTAGTAGC--------TCCATTGCATGAGAACAGTG-TAACTCACACTGACTTGTGATATCAGCCTTCTCTGGGCCTT-GTG--------TGTGGAGAGCTTTCTATCTT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62184493 248 + 62195757 GGGACTCTATGATGGGCAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATT--AGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATTTTAGTAGC--------TCCATTGCATGAGAACAGTG-TAACTCACACTGACTTGTGATATCAGCCTTCTCTGGGCCTT-GTG--------TGTGGAGAGCTTTCTATCTT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 571194 249 - 578057 GGGACTCTATGATGGGCAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAACGTATGTATTTTAGTAGC--------TCCATTGCATGAGAACAGTG-TAACTCACACTGACTTGTGATATCAGCCTTCTCT-GGCCTT-GTG--------TGTGGAGAGCTTTCTATCTT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110092900 249 - 110113093 GGGACTCTATGATGGACAGCCTGTGCTTTTT---GAC-TCAGTTTGCTATTTTTCTGTGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATTTTAGTAGC--------TCCATTGCATGAGAACAGTG-TAACTCACACTGACTTGTGATATCAGCCTTCTCTAGGCCTT-GTG--------TGTGGAGAGCTTTCTGTCTT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92832929 249 - 92844088 GGGACTCTATGATGGACAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATTTTAGTAGC--------TCCATTG-ATGAGAACAGTG-TAACTCGCACTGACTTGTGGTATCAGCCTTCTCTGAGCCTT-GTG--------TGTGGAGAGCTTTCTATCTT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96498597 249 + 96509753 GGGACTCTATGATGGACAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATTTTAGTAGC--------TCCATTG-ATGAGAACAGTG-TAACTCGCACTGACTTGTGGTATCAGCCTTCTCTGAGCCTT-GTG--------TGTGGAGAGCTTTCTATCTT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16968298 249 - 16982598 GGGACTCTATGATGGACAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATTTTAGTAGC--------TCCATTG-ATGAGAACAGTG-TAACTCGCACTGACTTGTGGTATCAGCCTTCTCTGAGCCTT-GTG--------TGTGGAGAGCTTTCTGTCTT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3770348 249 - 3785965 GGGACTCTATGATGGACAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGCGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATGTTAGTAGC--------TCCATTG-ATGAGAATAGTG-TAACTCGCACTGACTTGTGGTATCAGCCTTCTCTGAGCCTT-GTG--------TGTGGAGAGCTTTCTATCTT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90360394 249 - 90373283 GGGACTCTATGATGGACAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGCGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGACTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATTTTAGTAGC--------TCCATTG-ATGAGAACAGTG-TAACTCGCACTGACTTGTGGTATCAGCCTTCTCTGAGCCTT-GTG--------TGTGCAGAGCTTTCTATCTT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 161043 249 - 179258 GGGACTCTATAATGGACAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGCGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATTTTAGTAGC--------TCCATTG-ATGAGAATAGTG-TAACTCGCACTGACTTGTGGTATCAGCCTTCTCTGAGCCTT-GTG--------TGTGGAGAGCTTTCTATCTT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5630219 247 - 5823884 GGGACTC--TGATGGACAGCCTGTGCTTTTT---GACTTCAGTTTGCTATTTTTCTGCGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAATTTTTTTGTAAGAGCAAATGTATGTATTTTAGTAGC--------TCCATTG-ATGAGAACAGTG-TAACTCACACTGACTTGTGGTATCAGCCTTCTCTGAGCCTT-GTG--------TGTGGAGAGCTTTGTATCTT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58188098 253 + 159171411 AGGACTGTGTTATGGGCAGCCTATGCCTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAAATCTGGAGAAAAAGAGATTTGTTAGTTTTGTAA-TTTTTCATAAGAATAAATGTATGTATTTTAGTAGCATACATTTAGTGTTGCATGAGAACAGTG-TAACTCACACTAGCTTGTGAAGTCGGCCATCTCTGGGCCTT-GTG--------TGTGGAGAG----CCGTCTT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16350692 245 + 16356641 GGGACTGTATTATGGACAGCCTATGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAAATCTGGAGAGAA--AGATTTGTTAGTTTTGTAA-TTTTTCATAAGAACAAATGTATGTATTTTAGCAGC--------TGTGTTGCATGGGAACGGTG-TAACTCACACTAACTTGTGAGGTCGGCTGTCTCTGGGCCTT-GTG--------TGTGGAGAGC--TCTGTCTT i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1224732 247 + 1231380 GGGACTGTATTATGGACAGCCTATGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATTGGAGTACTGATTCATAGA-TTCTATCTTTTATAAATCTAGAGAGAAAGAGATTTGTTAGTTTTGTAA-TTTTTCATAAGAACAAATGTATGTATTTTAGCAGC--------TGTGTTGCATGAGAACAGTG-TAACTCACAGTAACTTGTGAAGTCGGCCGTCTCTGGGCCTT-GTG--------TGTGGAGAGC--TCTGTCCT i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2751761 246 + 11732439 GGGACTGTATTATGGACAGCCTATGCTTTTT---GACTTCAGTTTGCTATTTTTCTGTGATCACATTAGAGTACTGATTCATAGA-TTCTATCTTTTATAAATCTGGAGAAAA--AGATTTGATAGTTTTATAA-TTTTTCATAAGAACAAATGTATGTATTTTAGTAGC--------TGTGTTGCATGAGAACAGTGTTAACTCACGCTAACTTGTGAAGTCAGCCGTCTCTGGGCCTT-GTG--------TGTGGAGAGC--TCTGTCTT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56936368 249 + 57149010 GGGCCTGTATTATAGACAGCCTGTGCTTTTT---AACTTCAGTTTGCTATTTTTCTGTCGTCATATTAGAGTACTGATTCATAGA-TTTTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAA-TTTTTCTTGAGAACAAATATTTGTATTTTAGTAGC--------TCAGTTGTATTAGAACAGTG-TAACTCACAGCGACTTACGAAATCAATCTTCACCAGGACTT-GTG--------TGTGGAGAGCTTTCTATCCT i micMur3.chr18 C 0 C 0 s proCoq1.NW_012150197v1 1926150 249 - 2029793 GGGCCTATATTATAGACAGCCTGTGCTTTTT---AACTTCAGTTTGCTATTTTTCTGTGATCATATTAGAGTACTGATTCATAGA-TTTTATCTTTTATAATTCTGGAGAAAAAGAGATTTGTTAGTTTTGTAA-TTTTTCTTAAGAACAAATATTTGTATTTTAGTAGC--------TCAGTTGTATTAGAACAGTG-TAACTCACAGTAACTTATGAAATCAATCTTCACCAGGACTT-GTG--------TTTGGAGAGCTTTCTATCTT i proCoq1.NW_012150197v1 C 0 N 0 s otoGar3.GL873542 22925695 246 + 22939663 GGGCCTATATTATAGACAGCTTGTGTTTTTT---AACTTCAGTTTGCTATTTTTCTGTGACCATATTAGAGTACTGATTCATAGA-TTTTATCTTTTATAATTCTGGAGAAAAAAAGATTTGTTAGTTTTGTAA-TTTTTCTTAAGAACAAATA----TGATTTAGTAGC--------TCTGTTACATTAGCACTGCA-TAACTCGCAGTGACTTGCGAAATCAGTCTTCTCCAGGACTTAGTG--------TGTGGAGAGCTTTCTATTTT i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181856013 223 + 182113224 -------TGTCACAGAACGCCCGCACTTCTT---GAC---------------TTCTTTGGTCATATTAGAGTACCAGGTCATAGATTTTTATCTTTTATAATTCTGGAGAAAAAAA---TTGTTAGTTTTGTAA-GTTTTCTTAAGAACAGATATATGTATTTTAATAGC--------TCCATTGCATTAGAGCAGTT-TAACT--TAGTGACATGTGAAATCTGTTATCTCCAGGCCAT-AGG--------TGTTGAGAACTATCAAGTTT i mm10.chr2 C 0 C 0 s canFam3.chr24 47670606 237 + 47698779 GGGACAATGTTACAGACAGCCTGTGCTTTTTTTAAACTTCAGTTGGCTATTTTTCTGTAATCACATTAGAGTACTGATTAATAGA-TTTTATCTTTTATAATTCTGGAGAAAAAGACGT------GTTTTCTAA-TTTTTCTTAATAACAAATATGTGTATTTTAGTAGC--------TCCATTGCGTCAGAATAACG----------GTGACTTGTGAAGCCTACCTTCTCCAGGCCCT-TCG--------GGTGGAGCACGGTCTGTGTT i canFam3.chr24 C 0 I 1 s dasNov3.JH569290 356556 250 - 397369 GGGACTGTATTACAGACAGCTTGTGCTTGAT--GGACTTCAGTGTGCTATTTTTCTGTAACCACATTAGAGTACTGCTTCATATC-TTTTGTCTTTTATAATTCTGGAGGAAA--AAATTTGTTAGTTTCATAA-TTTTTCTTAAAAACAAATATAT---TTTTAGGAGC--------TCTATTGCATTAGAACAGTT-GAACTC-CAGTGACTTGTGAAATAAATCTTCTCCAGGCCTT-GTGATGATATACATTGACAGCCAGAAATG-- i dasNov3.JH569290 I 438 C 0 a score=16670.000000 s hg38.chr20_KI270870v1_alt 183374 1 + 183433 A s panTro5.chr20 66519672 1 + 66533130 A i panTro5.chr20 C 0 C 0 s panPan2.chr20 62184741 1 + 62195757 A i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 571443 1 - 578057 A i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110093149 1 - 110113093 A i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92833178 1 - 92844088 A i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96498846 1 + 96509753 A i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16968547 1 - 16982598 A i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3770597 1 - 3785965 A i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90360643 1 - 90373283 A i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 161292 1 - 179258 A i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5630466 1 - 5823884 G i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58188351 1 + 159171411 A i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16350937 1 + 16356641 A i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1224979 1 + 1231380 A i cebCap1.NW_016107870v1 C 0 C 0 s aotNan1.NW_018500483v1 2752007 1 + 11732439 A i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56936617 1 + 57149010 A i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22925941 1 + 22939663 A i otoGar3.GL873542 C 0 C 0 s mm10.chr2 181856236 1 + 182113224 A i mm10.chr2 C 0 N 0 s canFam3.chr24 47670844 1 + 47698779 A i canFam3.chr24 I 1 C 0 s dasNov3.JH569290 356806 1 - 397369 A i dasNov3.JH569290 C 0 C 0 a score=438802.000000 s hg38.chr20_KI270870v1_alt 183375 40 + 183433 CCAAGTGGTAGGGCTAAAAG-AACA-ACAGCCTTT--TTGGTAG s panTro5.chr20 66519673 40 + 66533130 CCAAGTGGTAGGGCTAAAAG-AACA-ACAGCCTTT--TTGGTAG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62184742 40 + 62195757 CCAAGTGGTAGGGCTAAAAG-AACA-ACAGCCTTT--TTGGTAG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 571444 40 - 578057 CCAAGTGGTAGGGCTAAAAG-AACA-ACAGCCTTT--TTGGTAG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110093150 40 - 110113093 CCAGGTGGTAGGGCTAAAAG-AACA-GCAGCCTTT--TTGGTAG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92833179 40 - 92844088 CCAAGTGGTAGGGCTAAAAG-AACA-GCAGCGTTT--TTGGTAG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96498847 40 + 96509753 CCAAGTGGTAGGGCTAAAAG-AACA-GCAGCGTTT--TTGGTAG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16968548 40 - 16982598 CCAAGTGGTAGGGCTAAAAG-AACA-GCAGCGTTT--TTGGTAG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3770598 40 - 3785965 CCAAGTGGTAGGGCTAAAAG-AACA-GCAGCGTTT--TTGGTAG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90360644 39 - 90373283 CCAAGTGGTA-GGCTAAAGG-AACA-GCAGCGTTT--TTGGTGG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 161293 40 - 179258 CCAAATGGTAGGGCTAAAAG-AACA-GCAGCGTTT--TTGGTAG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5630467 40 - 5823884 CCAAGCGGTAGGGCTAAAAG-AACA-GCAGCGTTG--TTGGTAG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58188352 39 + 159171411 CTAAG-GGTAGGGCTCAAAG-TACA-GCAGCCCCT--TTGGTAG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16350938 40 + 16356641 CTAAGTGGTAGGGCTCAAAG-TACA-GCGGCCCTT--TTGGTAG i saiBol1.JH378156 C 0 C 0 s cebCap1.NW_016107870v1 1224980 40 + 1231380 CTAAGTGGTAGGGCTCAAAG-AACA-GCGGCCCTT--TTGGTAG i cebCap1.NW_016107870v1 C 0 N 0 s aotNan1.NW_018500483v1 2752008 40 + 11732439 CTAAGTGATAGGGCTCAAAG-AACA-GCAGCCCTT--TTGGTAG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56936618 40 + 57149010 TCAAATTGTGGGGCTAGAAG-AAAA-GCAGTCTTT--CTAGTAG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22925942 40 + 22939663 TCAAGTTACGGGGCTGGAAG-AAAA-GCAGTCTTT--CTTGTAG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47670845 36 + 47698779 CCAAGTTCT-GGGTTAGAAG-AGGAGGCCGCCTGT--CAG---- i canFam3.chr24 C 0 C 0 s dasNov3.JH569290 356807 40 - 397369 CCAAGTTGTGGATCTGAAAGAAATG-ACAGTACTTAACTGG--- i dasNov3.JH569290 C 0 C 0 a score=178023.000000 s hg38.chr20_KI270870v1_alt 183415 15 + 183433 TCACATAGCAGAATG s panTro5.chr20 66519713 15 + 66533130 TCACATAGCAGAATG i panTro5.chr20 C 0 C 0 s panPan2.chr20 62184782 15 + 62195757 TCACATAGCAGAATG i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 571484 15 - 578057 TCACATAGCAGAATG i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110093190 15 - 110113093 TCACATAGCAGAATG i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92833219 15 - 92844088 TCACATAGCAAAATG i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96498887 15 + 96509753 TCACATAGCAAAATG i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16968588 15 - 16982598 TCACATAGCAAAATG i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3770638 15 - 3785965 TCACAGAGCAAAATG i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90360683 15 - 90373283 TCACATAGCAGAATG i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 161333 15 - 179258 TCACATAGCAAAATG i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5630507 15 - 5823884 TCACATGGCAGAATG i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58188391 15 + 159171411 TCACGTGGCAGGATG i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16350978 15 + 16356641 GCATGTGGCAGGATG i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2752048 15 + 11732439 TCATGTGGCAGGATG i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56936658 15 + 57149010 TCAGATAGCAAAATG i micMur3.chr18 C 0 C 0 s otoGar3.GL873542 22925982 15 + 22939663 TCGGATAGCAAAATG i otoGar3.GL873542 C 0 C 0 s canFam3.chr24 47670881 15 + 47698779 TTAGATGGCAGGATG i canFam3.chr24 C 0 N 0 s dasNov3.JH569290 356847 15 - 397369 TCAGATGGCAGAGTG i dasNov3.JH569290 C 0 N 0 a score=24752.000000 s hg38.chr20_KI270870v1_alt 183430 2 + 183433 AT s panTro5.chr20 66519728 2 + 66533130 AT i panTro5.chr20 C 0 C 0 s panPan2.chr20 62184797 2 + 62195757 AT i panPan2.chr20 C 0 C 0 s gorGor5.CYUI01015848v1 571499 2 - 578057 AT i gorGor5.CYUI01015848v1 C 0 C 0 s nomLeu3.chr13 110093205 2 - 110113093 AT i nomLeu3.chr13 C 0 C 0 s rheMac8.chr10 92833234 2 - 92844088 AT i rheMac8.chr10 C 0 C 0 s macFas5.chr10 96498902 2 + 96509753 AT i macFas5.chr10 C 0 C 0 s macNem1.NW_012014244v1 16968603 2 - 16982598 AT i macNem1.NW_012014244v1 C 0 C 0 s cerAty1.NW_012001373v1 3770653 2 - 3785965 AT i cerAty1.NW_012001373v1 C 0 C 0 s chlSab2.chr2 90360698 2 - 90373283 AT i chlSab2.chr2 C 0 C 0 s manLeu1.NW_012101652v1 161348 2 - 179258 AT i manLeu1.NW_012101652v1 C 0 C 0 s colAng1.NW_012114444v1 5630522 2 - 5823884 AT i colAng1.NW_012114444v1 C 0 C 0 s calJac3.chr5 58188406 2 + 159171411 AT i calJac3.chr5 C 0 C 0 s saiBol1.JH378156 16350993 2 + 16356641 AT i saiBol1.JH378156 C 0 C 0 s aotNan1.NW_018500483v1 2752063 2 + 11732439 AT i aotNan1.NW_018500483v1 C 0 C 0 s micMur3.chr18 56936673 2 + 57149010 AT i micMur3.chr18 C 0 N 0 s otoGar3.GL873542 22925997 2 + 22939663 AT i otoGar3.GL873542 C 0 N 0 a score=10500.000000 s hg38.chr20_KI270870v1_alt 183432 1 + 183433 C s panTro5.chr20 66519730 1 + 66533130 C i panTro5.chr20 C 0 N 0 s panPan2.chr20 62184799 1 + 62195757 C i panPan2.chr20 C 0 N 0 s gorGor5.CYUI01015848v1 571501 1 - 578057 C i gorGor5.CYUI01015848v1 C 0 N 0 s nomLeu3.chr13 110093207 1 - 110113093 C i nomLeu3.chr13 C 0 N 0 s rheMac8.chr10 92833236 1 - 92844088 C i rheMac8.chr10 C 0 N 0 s macFas5.chr10 96498904 1 + 96509753 C i macFas5.chr10 C 0 N 0 s macNem1.NW_012014244v1 16968605 1 - 16982598 C i macNem1.NW_012014244v1 C 0 N 0 s cerAty1.NW_012001373v1 3770655 1 - 3785965 C i cerAty1.NW_012001373v1 C 0 N 0 s chlSab2.chr2 90360700 1 - 90373283 C i chlSab2.chr2 C 0 N 0 s manLeu1.NW_012101652v1 161350 1 - 179258 C i manLeu1.NW_012101652v1 C 0 N 0 s colAng1.NW_012114444v1 5630524 1 - 5823884 C i colAng1.NW_012114444v1 C 0 N 0 s calJac3.chr5 58188408 1 + 159171411 C i calJac3.chr5 C 0 N 0 s saiBol1.JH378156 16350995 1 + 16356641 C i saiBol1.JH378156 C 0 N 0 s aotNan1.NW_018500483v1 2752065 1 + 11732439 C i aotNan1.NW_018500483v1 C 0 N 0